Query psy5751
Match_columns 232
No_of_seqs 122 out of 1255
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 17:07:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sov_A LRP-6, low-density lipo 100.0 9.9E-42 3.4E-46 274.4 31.1 222 2-229 37-261 (318)
2 3p5b_L Low density lipoprotein 100.0 3.2E-41 1.1E-45 279.5 34.5 223 1-229 113-343 (400)
3 3s94_A LRP-6, low-density lipo 100.0 2.1E-41 7.3E-46 293.8 34.3 225 1-231 350-575 (619)
4 3v64_C Agrin; beta propeller, 100.0 2.7E-41 9.1E-46 275.4 32.6 223 1-229 74-298 (349)
5 4a0p_A LRP6, LRP-6, low-densit 100.0 2.4E-41 8.1E-46 293.8 34.1 224 1-231 38-262 (628)
6 4a0p_A LRP6, LRP-6, low-densit 100.0 4.4E-41 1.5E-45 292.1 32.7 225 1-230 341-573 (628)
7 3v65_B Low-density lipoprotein 100.0 1.1E-40 3.8E-45 275.2 31.8 223 1-229 117-341 (386)
8 1ijq_A LDL receptor, low-densi 100.0 5.2E-40 1.8E-44 264.5 33.1 224 1-230 31-262 (316)
9 3m0c_C LDL receptor, low-densi 100.0 4.8E-40 1.6E-44 291.0 33.3 223 1-229 425-655 (791)
10 3s94_A LRP-6, low-density lipo 100.0 2E-40 6.9E-45 287.7 28.7 222 1-228 41-265 (619)
11 1npe_A Nidogen, entactin; glyc 100.0 9.2E-38 3.1E-42 245.4 31.9 227 2-232 38-265 (267)
12 1n7d_A LDL receptor, low-densi 100.0 3.6E-37 1.2E-41 270.9 12.6 224 1-230 407-638 (699)
13 3v64_C Agrin; beta propeller, 100.0 1.1E-31 3.9E-36 218.6 31.5 209 11-228 44-256 (349)
14 3p5b_L Low density lipoprotein 100.0 3E-31 1E-35 219.7 33.2 211 11-228 83-301 (400)
15 3v65_B Low-density lipoprotein 100.0 3.2E-31 1.1E-35 218.7 30.5 209 11-228 87-299 (386)
16 1ijq_A LDL receptor, low-densi 100.0 2.7E-30 9.1E-35 207.8 33.0 209 13-228 3-219 (316)
17 3m0c_C LDL receptor, low-densi 100.0 1.3E-30 4.6E-35 230.7 32.4 211 11-228 395-613 (791)
18 3sov_A LRP-6, low-density lipo 100.0 1.1E-30 3.8E-35 210.0 27.8 210 11-228 4-219 (318)
19 1npe_A Nidogen, entactin; glyc 100.0 5.4E-28 1.9E-32 189.6 27.8 207 12-227 2-218 (267)
20 1n7d_A LDL receptor, low-densi 99.9 5.4E-28 1.8E-32 212.7 11.2 209 13-228 379-595 (699)
21 3tc9_A Hypothetical hydrolase; 99.9 2.5E-24 8.4E-29 179.8 25.8 221 1-228 138-409 (430)
22 3s25_A Hypothetical 7-bladed b 99.9 2E-24 7E-29 171.9 21.2 187 5-210 109-299 (302)
23 3hrp_A Uncharacterized protein 99.9 5.3E-23 1.8E-27 170.8 28.5 221 1-229 132-391 (409)
24 4hw6_A Hypothetical protein, I 99.9 2.9E-23 1E-27 173.4 26.6 219 1-226 140-410 (433)
25 1rwi_B Serine/threonine-protei 99.9 8.6E-22 2.9E-26 153.7 23.1 218 1-229 25-245 (270)
26 1q7f_A NHL, brain tumor CG1071 99.9 3.8E-21 1.3E-25 151.6 26.7 222 1-229 31-262 (286)
27 3kya_A Putative phosphatase; s 99.9 4.1E-21 1.4E-25 161.1 27.0 222 2-228 141-454 (496)
28 3fvz_A Peptidyl-glycine alpha- 99.9 1.9E-20 6.4E-25 151.0 27.9 224 2-229 26-303 (329)
29 3hrp_A Uncharacterized protein 99.9 6.1E-21 2.1E-25 158.4 24.7 193 5-202 176-408 (409)
30 3tc9_A Hypothetical hydrolase; 99.9 5.1E-21 1.8E-25 159.7 23.2 200 1-203 180-429 (430)
31 2fp8_A Strictosidine synthase; 99.9 3.9E-21 1.3E-25 154.5 21.3 218 2-225 21-291 (322)
32 4hw6_A Hypothetical protein, I 99.9 1.9E-20 6.4E-25 156.4 24.3 197 1-203 183-432 (433)
33 3g4e_A Regucalcin; six bladed 99.9 1.2E-19 4.1E-24 144.2 25.5 212 2-226 15-249 (297)
34 3fvz_A Peptidyl-glycine alpha- 99.9 2.6E-20 8.8E-25 150.2 21.4 201 1-206 92-324 (329)
35 2p4o_A Hypothetical protein; p 99.9 1.8E-19 6E-24 143.9 24.7 214 1-226 33-263 (306)
36 3kya_A Putative phosphatase; s 99.9 3E-19 1E-23 149.9 26.4 201 2-206 188-477 (496)
37 1rwi_B Serine/threonine-protei 99.9 4E-20 1.4E-24 144.3 19.4 196 2-206 69-266 (270)
38 2qc5_A Streptogramin B lactona 99.8 2.5E-18 8.6E-23 135.6 26.7 218 1-229 21-241 (300)
39 2qc5_A Streptogramin B lactona 99.8 1.7E-18 5.8E-23 136.6 25.5 217 2-229 64-283 (300)
40 1q7f_A NHL, brain tumor CG1071 99.8 3.5E-18 1.2E-22 134.5 26.0 195 2-203 79-279 (286)
41 3e5z_A Putative gluconolactona 99.8 6.7E-18 2.3E-22 133.7 26.1 211 1-226 29-264 (296)
42 3s25_A Hypothetical 7-bladed b 99.8 2E-18 6.7E-23 137.4 22.1 198 7-228 60-274 (302)
43 2z2n_A Virginiamycin B lyase; 99.8 1.3E-17 4.4E-22 131.4 26.7 214 2-228 59-276 (299)
44 2z2n_A Virginiamycin B lyase; 99.8 1.1E-17 3.8E-22 131.8 26.3 217 2-229 17-236 (299)
45 3dr2_A Exported gluconolactona 99.8 2.2E-18 7.5E-23 137.4 21.3 210 2-226 47-285 (305)
46 2fp8_A Strictosidine synthase; 99.8 5.4E-18 1.9E-22 136.1 22.6 196 2-206 82-315 (322)
47 3dsm_A Uncharacterized protein 99.8 3E-17 1E-21 132.3 25.9 215 1-228 85-322 (328)
48 2ism_A Putative oxidoreductase 99.8 2E-17 6.9E-22 134.6 24.7 220 1-229 32-326 (352)
49 2dg1_A DRP35, lactonase; beta 99.8 9E-17 3.1E-21 129.0 27.8 221 2-228 47-290 (333)
50 3a9g_A Putative uncharacterize 99.8 3.5E-16 1.2E-20 127.3 26.6 220 1-229 30-323 (354)
51 2ghs_A AGR_C_1268P; regucalcin 99.8 1E-15 3.6E-20 123.1 28.2 211 2-226 51-279 (326)
52 2qe8_A Uncharacterized protein 99.8 8.2E-17 2.8E-21 130.4 21.1 223 1-229 18-302 (343)
53 3dsm_A Uncharacterized protein 99.8 2.9E-15 9.8E-20 120.6 28.2 212 2-227 46-276 (328)
54 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 7.8E-16 2.7E-20 122.3 23.2 216 2-228 20-278 (314)
55 2qe8_A Uncharacterized protein 99.7 8.3E-16 2.9E-20 124.5 22.0 192 1-201 68-318 (343)
56 3qqz_A Putative uncharacterize 99.7 3.8E-14 1.3E-18 109.5 29.8 199 2-204 29-253 (255)
57 2p9w_A MAL S 1 allergenic prot 99.7 5.9E-15 2E-19 117.1 24.9 218 1-226 14-287 (334)
58 2p4o_A Hypothetical protein; p 99.7 3.3E-15 1.1E-19 119.1 23.5 180 44-229 32-223 (306)
59 3sre_A PON1, serum paraoxonase 99.7 1.8E-15 6.1E-20 122.4 21.2 202 2-211 52-308 (355)
60 3vgz_A Uncharacterized protein 99.7 5.3E-14 1.8E-18 113.2 28.9 219 2-229 91-325 (353)
61 3vgz_A Uncharacterized protein 99.7 1.5E-13 5.1E-18 110.5 30.2 217 2-228 43-282 (353)
62 3das_A Putative oxidoreductase 99.7 1.1E-13 3.6E-18 111.6 28.4 222 1-229 33-319 (347)
63 2g8s_A Glucose/sorbosone dehyd 99.7 1.1E-14 3.9E-19 118.4 22.6 222 1-229 19-334 (353)
64 3u4y_A Uncharacterized protein 99.7 2E-13 7E-18 109.0 27.2 218 6-229 4-232 (331)
65 3e5z_A Putative gluconolactona 99.7 5.6E-14 1.9E-18 111.0 23.7 185 37-229 21-229 (296)
66 2ism_A Putative oxidoreductase 99.7 3.1E-14 1E-18 115.8 21.7 188 2-194 77-335 (352)
67 3g4e_A Regucalcin; six bladed 99.6 9.2E-14 3.1E-18 110.2 23.1 185 36-229 5-210 (297)
68 3a9g_A Putative uncharacterize 99.6 2.2E-13 7.4E-18 110.8 24.7 200 2-204 75-352 (354)
69 3dr2_A Exported gluconolactona 99.6 1.2E-13 4.1E-18 109.9 21.6 185 37-229 38-250 (305)
70 2iwa_A Glutamine cyclotransfer 99.6 1.9E-12 6.6E-17 100.5 27.5 192 2-204 23-237 (266)
71 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.2E-13 7.5E-18 108.0 21.4 194 2-204 73-299 (314)
72 3u4y_A Uncharacterized protein 99.6 1.1E-12 3.9E-17 104.7 25.6 197 4-207 44-255 (331)
73 1l0q_A Surface layer protein; 99.6 8.5E-12 2.9E-16 101.8 30.0 217 2-229 34-255 (391)
74 3hfq_A Uncharacterized protein 99.6 2.9E-12 9.8E-17 103.2 25.7 205 2-210 88-325 (347)
75 2dg1_A DRP35, lactonase; beta 99.6 2.6E-12 8.9E-17 102.9 24.3 188 39-229 40-244 (333)
76 3hfq_A Uncharacterized protein 99.6 3.4E-12 1.2E-16 102.8 25.1 223 2-229 42-297 (347)
77 2g8s_A Glucose/sorbosone dehyd 99.6 9.3E-13 3.2E-17 107.1 21.5 198 2-202 68-352 (353)
78 2iwa_A Glutamine cyclotransfer 99.5 5.6E-12 1.9E-16 98.0 23.4 177 44-229 21-217 (266)
79 3das_A Putative oxidoreductase 99.5 2.3E-12 7.9E-17 103.8 20.4 164 37-202 25-233 (347)
80 3scy_A Hypothetical bacterial 99.5 8E-11 2.7E-15 95.3 29.8 219 2-226 102-360 (361)
81 1ri6_A Putative isomerase YBHE 99.5 1.5E-11 5E-16 98.2 25.1 223 2-228 86-333 (343)
82 3scy_A Hypothetical bacterial 99.5 9E-11 3.1E-15 95.0 29.9 222 2-229 52-317 (361)
83 1ri6_A Putative isomerase YBHE 99.5 1.4E-11 4.9E-16 98.3 24.7 224 2-229 40-288 (343)
84 1l0q_A Surface layer protein; 99.5 7.6E-11 2.6E-15 96.2 29.3 196 2-204 76-275 (391)
85 3sre_A PON1, serum paraoxonase 99.5 2.1E-11 7.2E-16 98.6 21.6 183 43-230 49-279 (355)
86 3bws_A Protein LP49; two-domai 99.5 1.5E-10 5.1E-15 95.7 27.2 217 3-228 173-411 (433)
87 2mad_H Methylamine dehydrogena 99.4 5.2E-10 1.8E-14 91.5 28.0 213 4-228 70-372 (373)
88 1cru_A Protein (soluble quinop 99.4 4.4E-11 1.5E-15 100.3 22.0 148 1-154 28-248 (454)
89 3qqz_A Putative uncharacterize 99.4 2.1E-10 7.3E-15 88.5 24.0 183 44-229 27-235 (255)
90 3nol_A Glutamine cyclotransfer 99.4 1.1E-09 3.8E-14 84.3 27.0 188 3-202 46-254 (262)
91 2oiz_A Aromatic amine dehydrog 99.4 4.5E-10 1.5E-14 91.4 26.0 223 2-229 53-359 (361)
92 2ghs_A AGR_C_1268P; regucalcin 99.4 1.4E-10 4.9E-15 93.0 22.8 185 35-229 40-241 (326)
93 1nir_A Nitrite reductase; hemo 99.4 5.1E-10 1.7E-14 96.0 27.5 197 2-204 181-402 (543)
94 1cru_A Protein (soluble quinop 99.4 2E-11 6.7E-16 102.4 18.2 157 37-195 20-249 (454)
95 3nok_A Glutaminyl cyclase; bet 99.4 8.4E-10 2.9E-14 85.0 25.7 185 3-201 58-263 (268)
96 3mbr_X Glutamine cyclotransfer 99.4 7.3E-09 2.5E-13 79.0 29.8 189 2-202 23-233 (243)
97 3bws_A Protein LP49; two-domai 99.4 6.7E-10 2.3E-14 91.8 26.1 195 2-203 214-431 (433)
98 3c75_H MADH, methylamine dehyd 99.4 5.2E-11 1.8E-15 98.7 18.4 207 1-210 120-409 (426)
99 3mbr_X Glutamine cyclotransfer 99.4 1.2E-09 4.2E-14 83.3 24.3 175 44-229 21-215 (243)
100 1pby_B Quinohemoprotein amine 99.4 1E-09 3.5E-14 87.2 25.0 200 2-212 36-319 (337)
101 3nok_A Glutaminyl cyclase; bet 99.3 4.3E-10 1.5E-14 86.6 20.6 171 47-229 58-246 (268)
102 3nol_A Glutamine cyclotransfer 99.3 8.3E-10 2.8E-14 85.0 22.1 174 44-229 41-236 (262)
103 2p9w_A MAL S 1 allergenic prot 99.3 1.8E-10 6.1E-15 91.5 18.3 179 42-223 11-238 (334)
104 3no2_A Uncharacterized protein 99.3 1.3E-09 4.6E-14 85.4 22.7 210 11-228 4-223 (276)
105 1nir_A Nitrite reductase; hemo 99.3 3.1E-09 1E-13 91.2 24.4 192 7-205 145-356 (543)
106 1pby_B Quinohemoprotein amine 99.3 2.7E-09 9.2E-14 84.7 22.4 150 13-168 2-167 (337)
107 1mda_H Methylamine dehydrogena 99.3 6.1E-10 2.1E-14 90.7 18.4 212 2-228 68-367 (368)
108 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.4E-09 4.8E-14 88.4 20.4 182 24-207 120-344 (365)
109 1jmx_B Amine dehydrogenase; ox 99.2 7.3E-09 2.5E-13 82.7 23.1 200 2-213 45-335 (349)
110 3c75_H MADH, methylamine dehyd 99.2 2.9E-09 9.9E-14 88.3 20.9 212 10-230 83-382 (426)
111 1qks_A Cytochrome CD1 nitrite 99.2 3.1E-08 1.1E-12 85.2 28.1 198 2-204 199-421 (567)
112 3sjl_D Methylamine dehydrogena 99.2 3.1E-09 1E-13 86.8 20.6 215 2-228 139-384 (386)
113 1jmx_B Amine dehydrogenase; ox 99.2 1.4E-08 4.9E-13 81.0 23.8 156 4-167 4-178 (349)
114 3q6k_A 43.2 kDa salivary prote 99.2 7.1E-08 2.4E-12 78.4 26.7 190 2-194 89-344 (381)
115 2hqs_A Protein TOLB; TOLB, PAL 99.2 3.1E-08 1.1E-12 82.0 25.3 204 2-210 181-393 (415)
116 1fwx_A Nitrous oxide reductase 99.2 5.8E-09 2E-13 88.9 21.1 191 10-204 100-361 (595)
117 3no2_A Uncharacterized protein 99.2 1.5E-08 5.1E-13 79.4 21.6 210 2-224 39-272 (276)
118 1jof_A Carboxy-CIS,CIS-muconat 99.1 7E-09 2.4E-13 84.2 19.5 163 2-166 147-343 (365)
119 1qks_A Cytochrome CD1 nitrite 99.1 9E-08 3.1E-12 82.4 27.2 190 11-206 166-375 (567)
120 2mad_H Methylamine dehydrogena 99.1 1.8E-07 6.3E-12 76.4 26.6 110 9-122 30-158 (373)
121 2ojh_A Uncharacterized protein 99.1 4.3E-08 1.5E-12 76.0 20.3 202 2-210 44-264 (297)
122 2ece_A 462AA long hypothetical 99.1 3.9E-08 1.3E-12 81.3 20.0 218 9-229 93-392 (462)
123 3amr_A 3-phytase; beta-propell 99.0 3.3E-07 1.1E-11 73.4 23.5 183 15-203 43-262 (355)
124 1mda_H Methylamine dehydrogena 99.0 4.4E-08 1.5E-12 79.8 18.2 207 10-230 30-326 (368)
125 3q6k_A 43.2 kDa salivary prote 99.0 1.3E-06 4.6E-11 70.9 26.7 224 1-229 27-335 (381)
126 2hqs_A Protein TOLB; TOLB, PAL 99.0 7E-07 2.4E-11 73.8 25.7 181 24-208 160-348 (415)
127 2wg3_C Hedgehog-interacting pr 99.0 5.2E-07 1.8E-11 75.6 24.9 222 1-229 15-347 (463)
128 3sjl_D Methylamine dehydrogena 99.0 3.6E-07 1.2E-11 74.6 21.8 214 2-230 81-343 (386)
129 2wg3_C Hedgehog-interacting pr 98.9 1.1E-07 3.8E-12 79.7 18.7 190 37-228 7-286 (463)
130 1fwx_A Nitrous oxide reductase 98.9 1.4E-07 4.9E-12 80.5 18.8 221 2-229 136-455 (595)
131 2ece_A 462AA long hypothetical 98.9 8E-07 2.7E-11 73.5 22.4 224 2-230 140-454 (462)
132 2oiz_A Aromatic amine dehydrog 98.9 4.8E-07 1.6E-11 73.5 20.9 107 11-121 15-141 (361)
133 2ojh_A Uncharacterized protein 98.9 3E-06 1E-10 65.4 23.2 179 24-208 23-210 (297)
134 3azo_A Aminopeptidase; POP fam 98.8 7.3E-07 2.5E-11 77.7 21.5 207 3-210 133-375 (662)
135 1gxr_A ESG1, transducin-like e 98.8 1.9E-05 6.4E-10 62.2 28.5 214 3-228 101-317 (337)
136 1gxr_A ESG1, transducin-like e 98.8 2.6E-05 9E-10 61.4 26.0 213 3-227 55-275 (337)
137 2aq5_A Coronin-1A; WD40 repeat 98.7 4.9E-05 1.7E-09 62.0 27.5 220 2-228 84-324 (402)
138 2ymu_A WD-40 repeat protein; u 98.7 4E-05 1.4E-09 65.3 26.8 214 2-229 347-561 (577)
139 4gqb_B Methylosome protein 50; 98.6 4.9E-05 1.7E-09 61.1 24.8 196 3-203 131-330 (344)
140 2xyi_A Probable histone-bindin 98.6 5.2E-05 1.8E-09 62.6 25.6 196 3-203 132-352 (430)
141 2ecf_A Dipeptidyl peptidase IV 98.6 1E-05 3.5E-10 71.3 21.9 199 2-207 39-324 (741)
142 4aez_A CDC20, WD repeat-contai 98.6 0.00012 4.1E-09 59.7 29.5 195 2-205 137-337 (401)
143 2ymu_A WD-40 repeat protein; u 98.6 8.5E-05 2.9E-09 63.3 26.8 212 3-228 307-519 (577)
144 3pe7_A Oligogalacturonate lyas 98.6 3.4E-05 1.2E-09 62.4 22.3 203 5-210 41-279 (388)
145 3azo_A Aminopeptidase; POP fam 98.6 2.1E-06 7E-11 74.9 15.7 199 9-210 88-331 (662)
146 2xyi_A Probable histone-bindin 98.6 2.1E-05 7.1E-10 65.1 20.7 196 3-203 185-409 (430)
147 4g56_B MGC81050 protein; prote 98.5 3.3E-05 1.1E-09 62.3 21.2 196 3-203 143-342 (357)
148 3ei3_B DNA damage-binding prot 98.5 0.00015 5.3E-09 58.5 24.6 203 2-211 76-290 (383)
149 2vdu_B TRNA (guanine-N(7)-)-me 98.5 0.00028 9.7E-09 58.5 27.0 218 2-227 105-364 (450)
150 3hxj_A Pyrrolo-quinoline quino 98.5 2.8E-05 9.7E-10 61.4 19.4 184 11-211 107-291 (330)
151 2xdw_A Prolyl endopeptidase; a 98.5 0.00024 8.3E-09 62.6 26.8 205 3-211 128-376 (710)
152 3o4h_A Acylamino-acid-releasin 98.5 1.5E-05 5.1E-10 68.5 18.4 195 3-208 25-231 (582)
153 3ow8_A WD repeat-containing pr 98.5 0.00025 8.7E-09 56.2 24.4 190 4-201 127-318 (321)
154 3o4h_A Acylamino-acid-releasin 98.5 3.1E-06 1.1E-10 72.7 14.0 189 4-202 69-274 (582)
155 3pe7_A Oligogalacturonate lyas 98.5 1.1E-05 3.9E-10 65.2 16.5 179 24-203 169-383 (388)
156 2z3z_A Dipeptidyl aminopeptida 98.4 5.3E-05 1.8E-09 66.4 21.6 202 4-208 125-395 (706)
157 3mkq_A Coatomer beta'-subunit; 98.4 0.00073 2.5E-08 60.0 28.8 196 2-204 16-217 (814)
158 2ecf_A Dipeptidyl peptidase IV 98.4 0.0002 6.7E-09 63.1 24.3 201 2-208 154-419 (741)
159 3amr_A 3-phytase; beta-propell 98.4 6.5E-05 2.2E-09 60.2 18.8 147 13-164 88-263 (355)
160 3ow8_A WD repeat-containing pr 98.4 0.00043 1.5E-08 54.8 29.7 215 3-228 84-301 (321)
161 2vdu_B TRNA (guanine-N(7)-)-me 98.4 0.00075 2.6E-08 55.9 27.1 197 2-205 152-394 (450)
162 2z3z_A Dipeptidyl aminopeptida 98.3 8.4E-05 2.9E-09 65.2 20.4 199 3-205 184-436 (706)
163 2aq5_A Coronin-1A; WD40 repeat 98.3 0.00042 1.4E-08 56.4 23.3 196 5-204 40-254 (402)
164 4aez_A CDC20, WD repeat-contai 98.3 0.0007 2.4E-08 55.1 26.0 195 3-204 180-380 (401)
165 1vyh_C Platelet-activating fac 98.3 0.00075 2.6E-08 55.3 26.0 193 3-203 112-326 (410)
166 1k8k_C P40, ARP2/3 complex 41 98.3 0.00061 2.1E-08 54.3 25.3 215 3-227 12-254 (372)
167 1vyh_C Platelet-activating fac 98.3 0.0011 3.6E-08 54.4 26.5 216 3-228 154-391 (410)
168 4gqb_B Methylosome protein 50; 98.3 0.00097 3.3E-08 53.5 25.7 216 3-227 86-309 (344)
169 1xfd_A DIP, dipeptidyl aminope 98.3 0.00013 4.6E-09 63.9 19.6 199 4-205 118-396 (723)
170 4a9v_A PHOX; hydrolase, beta-p 98.2 2.2E-05 7.7E-10 66.6 13.5 113 42-155 382-553 (592)
171 2pm9_A Protein WEB1, protein t 98.2 0.0003 1E-08 57.1 20.0 199 2-204 70-294 (416)
172 1k32_A Tricorn protease; prote 98.2 0.0001 3.6E-09 67.8 18.9 179 3-192 299-491 (1045)
173 3c5m_A Oligogalacturonate lyas 98.2 0.00026 8.8E-09 57.1 19.2 182 24-210 169-390 (396)
174 2pm9_A Protein WEB1, protein t 98.2 9.2E-05 3.1E-09 60.2 16.5 159 3-166 169-339 (416)
175 3mkq_A Coatomer beta'-subunit; 98.2 0.0027 9.1E-08 56.3 28.8 197 2-204 58-259 (814)
176 3c5m_A Oligogalacturonate lyas 98.2 9.4E-05 3.2E-09 59.7 16.2 202 5-211 86-336 (396)
177 1yr2_A Prolyl oligopeptidase; 98.2 0.0019 6.6E-08 57.2 25.6 203 4-211 167-402 (741)
178 3hxj_A Pyrrolo-quinoline quino 98.1 0.00032 1.1E-08 55.2 17.8 178 6-201 143-321 (330)
179 4e54_B DNA damage-binding prot 98.1 0.00021 7E-09 59.1 17.1 196 2-203 122-326 (435)
180 1r5m_A SIR4-interacting protei 98.1 0.0022 7.6E-08 51.8 25.9 192 2-203 152-360 (425)
181 3zwl_B Eukaryotic translation 98.1 0.002 6.7E-08 51.0 28.1 198 2-204 35-249 (369)
182 1sq9_A Antiviral protein SKI8; 98.1 0.0022 7.6E-08 51.6 23.6 197 2-203 124-394 (397)
183 3iuj_A Prolyl endopeptidase; h 98.1 0.0043 1.5E-07 54.5 26.4 203 4-212 133-367 (693)
184 2bkl_A Prolyl endopeptidase; m 98.1 0.0017 5.8E-08 57.0 22.8 202 3-210 124-357 (695)
185 2ynn_A Coatomer subunit beta'; 98.1 0.0021 7.2E-08 50.2 27.5 196 2-203 16-216 (304)
186 1r5m_A SIR4-interacting protei 98.1 0.0028 9.6E-08 51.2 25.1 192 2-204 111-319 (425)
187 4ery_A WD repeat-containing pr 98.1 0.0024 8E-08 49.9 28.2 194 2-203 26-222 (312)
188 3v9f_A Two-component system se 98.0 0.0018 6.1E-08 57.7 22.5 192 3-208 410-615 (781)
189 4g56_B MGC81050 protein; prote 98.0 0.0015 5.1E-08 52.5 20.1 215 3-226 98-320 (357)
190 2gop_A Trilobed protease; beta 98.0 0.0028 9.5E-08 50.2 22.1 185 3-205 62-293 (347)
191 2ynn_A Coatomer subunit beta'; 98.0 0.0026 8.9E-08 49.7 26.4 219 3-229 59-282 (304)
192 2xdw_A Prolyl endopeptidase; a 98.0 0.0071 2.4E-07 53.2 25.4 196 10-206 82-322 (710)
193 1k32_A Tricorn protease; prote 98.0 0.002 6.9E-08 59.3 22.3 142 4-152 342-491 (1045)
194 2gop_A Trilobed protease; beta 98.0 0.0015 5.3E-08 51.7 19.0 163 24-201 44-250 (347)
195 4a9v_A PHOX; hydrolase, beta-p 98.0 0.00012 4.1E-09 62.2 12.8 108 84-192 381-550 (592)
196 4ery_A WD repeat-containing pr 98.0 0.0034 1.2E-07 49.0 28.9 195 3-204 69-268 (312)
197 3vl1_A 26S proteasome regulato 98.0 0.0045 1.5E-07 50.2 26.1 192 6-204 104-322 (420)
198 3k26_A Polycomb protein EED; W 98.0 0.0015 5.3E-08 51.7 18.7 158 3-165 22-193 (366)
199 3jrp_A Fusion protein of prote 97.9 0.0047 1.6E-07 49.1 26.3 197 2-205 14-241 (379)
200 3vl1_A 26S proteasome regulato 97.9 0.0054 1.8E-07 49.8 25.6 196 2-203 142-364 (420)
201 3i2n_A WD repeat-containing pr 97.9 0.0045 1.5E-07 48.8 23.4 197 2-203 21-242 (357)
202 3k26_A Polycomb protein EED; W 97.9 0.0051 1.7E-07 48.6 21.3 196 3-205 73-319 (366)
203 3ei3_B DNA damage-binding prot 97.9 0.0059 2E-07 49.0 22.8 182 42-227 72-260 (383)
204 1xfd_A DIP, dipeptidyl aminope 97.8 0.002 6.8E-08 56.5 18.8 203 2-206 63-347 (723)
205 1sq9_A Antiviral protein SKI8; 97.8 0.0077 2.6E-07 48.4 24.9 191 3-203 20-266 (397)
206 1erj_A Transcriptional repress 97.8 0.0087 3E-07 48.5 28.5 215 3-227 127-362 (393)
207 4a11_B DNA excision repair pro 97.8 0.0084 2.9E-07 48.1 25.8 195 2-203 46-275 (408)
208 3v9f_A Two-component system se 97.8 0.0092 3.1E-07 53.1 22.6 195 3-210 316-530 (781)
209 4a2l_A BT_4663, two-component 97.8 0.017 5.9E-07 51.5 24.7 210 3-228 360-596 (795)
210 3zwl_B Eukaryotic translation 97.8 0.008 2.7E-07 47.5 30.1 184 2-193 77-280 (369)
211 2pbi_B Guanine nucleotide-bind 97.8 0.0087 3E-07 47.9 25.2 189 3-197 158-350 (354)
212 3frx_A Guanine nucleotide-bind 97.8 0.0082 2.8E-07 47.2 24.4 191 3-203 69-266 (319)
213 3dwl_C Actin-related protein 2 97.8 0.00055 1.9E-08 54.9 13.2 194 4-205 16-237 (377)
214 2bkl_A Prolyl endopeptidase; m 97.7 0.019 6.6E-07 50.3 24.6 196 10-206 78-306 (695)
215 1got_B GT-beta; complex (GTP-b 97.7 0.01 3.5E-07 47.1 28.1 214 3-228 101-323 (340)
216 4e54_B DNA damage-binding prot 97.7 0.0024 8E-08 52.7 16.6 157 44-203 120-281 (435)
217 1yr2_A Prolyl oligopeptidase; 97.7 0.022 7.4E-07 50.4 24.5 194 9-204 116-350 (741)
218 4a2l_A BT_4663, two-component 97.7 0.023 7.9E-07 50.7 24.6 189 3-208 409-618 (795)
219 1got_B GT-beta; complex (GTP-b 97.7 0.012 4E-07 46.7 28.0 193 3-204 59-257 (340)
220 1pgu_A Actin interacting prote 97.7 0.02 6.9E-07 48.7 26.8 193 3-203 120-327 (615)
221 2xe4_A Oligopeptidase B; hydro 97.7 0.019 6.5E-07 51.0 22.4 193 4-202 178-398 (751)
222 1yfq_A Cell cycle arrest prote 97.7 0.011 3.9E-07 46.2 19.2 191 2-204 59-282 (342)
223 1erj_A Transcriptional repress 97.7 0.016 5.3E-07 47.0 25.0 192 3-203 68-286 (393)
224 3dm0_A Maltose-binding peripla 97.7 0.015 5.3E-07 50.8 21.5 193 3-203 434-631 (694)
225 1pgu_A Actin interacting prote 97.6 0.023 7.7E-07 48.4 26.5 195 3-204 22-238 (615)
226 1k8k_C P40, ARP2/3 complex 41 97.6 0.015 5E-07 46.2 25.8 194 2-204 55-274 (372)
227 4a5s_A Dipeptidyl peptidase 4 97.6 0.0071 2.4E-07 53.5 19.2 201 3-206 115-402 (740)
228 3iuj_A Prolyl endopeptidase; h 97.6 0.0085 2.9E-07 52.7 19.5 164 3-172 237-413 (693)
229 3iz6_a 40S ribosomal protein R 97.6 0.019 6.6E-07 46.2 23.3 194 6-204 164-375 (380)
230 4a11_B DNA excision repair pro 97.6 0.02 6.9E-07 45.8 23.7 158 2-164 102-276 (408)
231 3sfz_A APAF-1, apoptotic pepti 97.6 0.054 1.9E-06 50.5 27.6 157 2-165 618-775 (1249)
232 3frx_A Guanine nucleotide-bind 97.5 0.02 6.9E-07 44.9 25.0 195 3-204 21-227 (319)
233 3jro_A Fusion protein of prote 97.5 0.019 6.5E-07 50.9 20.2 197 2-204 12-238 (753)
234 1nr0_A Actin interacting prote 97.5 0.04 1.4E-06 47.5 25.8 220 2-228 21-250 (611)
235 3sfz_A APAF-1, apoptotic pepti 97.5 0.036 1.2E-06 51.7 22.4 191 4-203 845-1073(1249)
236 1yfq_A Cell cycle arrest prote 97.5 0.017 5.8E-07 45.2 17.4 154 43-204 11-179 (342)
237 3dm0_A Maltose-binding peripla 97.4 0.052 1.8E-06 47.4 27.1 197 2-203 385-591 (694)
238 3dwl_C Actin-related protein 2 97.4 0.032 1.1E-06 44.4 18.8 193 3-203 59-280 (377)
239 3jrp_A Fusion protein of prote 97.4 0.032 1.1E-06 44.1 24.6 194 3-203 59-286 (379)
240 3f3f_A Nucleoporin SEH1; struc 97.4 0.029 1E-06 43.5 24.1 196 2-203 14-248 (351)
241 3iz6_a 40S ribosomal protein R 97.3 0.042 1.4E-06 44.2 26.3 111 88-203 207-328 (380)
242 4aow_A Guanine nucleotide-bind 97.3 0.036 1.2E-06 43.2 23.1 195 3-204 90-286 (340)
243 3jro_A Fusion protein of prote 97.3 0.039 1.3E-06 48.9 19.8 195 3-203 57-284 (753)
244 3dw8_B Serine/threonine-protei 97.3 0.044 1.5E-06 44.6 18.5 157 42-206 176-375 (447)
245 3f3f_A Nucleoporin SEH1; struc 97.2 0.046 1.6E-06 42.4 21.5 157 2-164 60-249 (351)
246 1tl2_A L10, protein (tachylect 97.2 0.035 1.2E-06 41.5 15.3 144 4-163 45-209 (236)
247 3dw8_B Serine/threonine-protei 97.2 0.063 2.2E-06 43.7 21.5 203 2-211 31-324 (447)
248 2xzm_R RACK1; ribosome, transl 97.2 0.053 1.8E-06 42.8 24.5 191 3-203 80-284 (343)
249 2pbi_B Guanine nucleotide-bind 97.2 0.057 1.9E-06 43.1 29.6 196 2-204 67-271 (354)
250 1z68_A Fibroblast activation p 97.2 0.0029 9.9E-08 55.5 11.2 197 4-205 114-394 (719)
251 3fm0_A Protein CIAO1; WDR39,SG 97.2 0.057 1.9E-06 42.8 22.2 192 3-201 20-222 (345)
252 3i2n_A WD repeat-containing pr 97.2 0.055 1.9E-06 42.4 24.7 193 3-203 69-290 (357)
253 2oit_A Nucleoporin 214KDA; NH2 97.2 0.056 1.9E-06 44.6 18.2 223 2-228 95-370 (434)
254 3odt_A Protein DOA1; ubiquitin 97.1 0.054 1.8E-06 41.6 26.8 208 3-228 22-236 (313)
255 2oaj_A Protein SNI1; WD40 repe 97.1 0.14 4.9E-06 46.4 26.3 192 2-203 20-241 (902)
256 3v7d_B Cell division control p 97.1 0.08 2.7E-06 43.5 24.9 173 11-195 280-454 (464)
257 3zwu_A Alkaline phosphatase PH 97.1 0.0058 2E-07 52.6 11.5 111 42-153 382-551 (592)
258 2xzm_R RACK1; ribosome, transl 97.0 0.079 2.7E-06 41.9 27.2 196 3-203 25-243 (343)
259 4h5i_A Guanine nucleotide-exch 97.0 0.092 3.1E-06 42.1 22.5 196 3-202 137-341 (365)
260 1nr0_A Actin interacting prote 97.0 0.15 5E-06 43.9 26.2 194 3-203 107-312 (611)
261 4a5s_A Dipeptidyl peptidase 4 97.0 0.059 2E-06 47.6 17.4 138 4-150 21-188 (740)
262 3mmy_A MRNA export factor; mRN 96.9 0.096 3.3E-06 41.1 22.8 155 42-203 38-198 (368)
263 1z68_A Fibroblast activation p 96.9 0.0068 2.3E-07 53.2 10.3 137 4-151 20-187 (719)
264 4aow_A Guanine nucleotide-bind 96.7 0.13 4.5E-06 39.9 26.7 197 2-203 41-245 (340)
265 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.18 6.2E-06 41.2 26.2 190 4-210 164-355 (445)
266 2xe4_A Oligopeptidase B; hydro 96.7 0.29 9.8E-06 43.4 24.0 191 10-204 125-354 (751)
267 3lrv_A PRE-mRNA-splicing facto 96.7 0.16 5.4E-06 40.0 22.0 155 3-164 129-292 (343)
268 4h5i_A Guanine nucleotide-exch 96.6 0.12 4.2E-06 41.3 15.3 154 3-163 180-342 (365)
269 3odt_A Protein DOA1; ubiquitin 96.5 0.18 6.2E-06 38.5 26.1 208 2-227 62-276 (313)
270 2oit_A Nucleoporin 214KDA; NH2 96.4 0.067 2.3E-06 44.2 12.6 123 44-170 93-229 (434)
271 3gre_A Serine/threonine-protei 96.3 0.32 1.1E-05 39.5 24.3 197 2-203 114-358 (437)
272 3v7d_B Cell division control p 96.2 0.4 1.4E-05 39.2 29.4 192 3-205 166-382 (464)
273 1tl2_A L10, protein (tachylect 96.1 0.3 1E-05 36.5 19.0 176 11-203 4-209 (236)
274 1p22_A F-BOX/WD-repeat protein 96.0 0.48 1.6E-05 38.6 25.3 181 10-204 142-325 (435)
275 3mmy_A MRNA export factor; mRN 96.0 0.41 1.4E-05 37.3 26.8 114 2-121 42-161 (368)
276 2ovr_B FBW7, F-BOX/WD repeat p 95.7 0.65 2.2E-05 37.8 26.4 184 4-204 124-308 (445)
277 1p22_A F-BOX/WD-repeat protein 95.7 0.69 2.3E-05 37.6 24.6 183 4-203 178-364 (435)
278 1kb0_A Quinohemoprotein alcoho 95.6 1.1 3.8E-05 39.2 24.6 191 11-208 77-351 (677)
279 2oaj_A Protein SNI1; WD40 repe 95.5 1.1 3.6E-05 40.8 17.3 155 3-166 62-244 (902)
280 3zwu_A Alkaline phosphatase PH 95.5 0.49 1.7E-05 40.7 14.2 106 2-108 386-552 (592)
281 3lrv_A PRE-mRNA-splicing facto 95.5 0.7 2.4E-05 36.2 22.3 154 44-203 126-291 (343)
282 3ott_A Two-component system se 95.4 1 3.5E-05 39.7 16.8 184 4-203 423-625 (758)
283 2ad6_A Methanol dehydrogenase 95.4 1.1 3.9E-05 38.3 25.8 194 11-210 62-342 (571)
284 2ad6_A Methanol dehydrogenase 95.3 1.2 4.2E-05 38.1 22.8 98 90-192 389-525 (571)
285 1kb0_A Quinohemoprotein alcoho 95.1 1.6 5.4E-05 38.2 24.2 59 155-214 457-518 (677)
286 2j04_A TAU60, YPL007P, hypothe 94.4 2.1 7.2E-05 36.7 15.1 146 2-160 132-295 (588)
287 2pm7_B Protein transport prote 94.4 1.3 4.3E-05 34.0 28.6 197 3-204 13-238 (297)
288 3q7m_A Lipoprotein YFGL, BAMB; 94.3 1.6 5.4E-05 34.7 25.8 177 11-206 103-299 (376)
289 3q7m_A Lipoprotein YFGL, BAMB; 94.3 1.6 5.5E-05 34.6 25.4 136 55-202 239-376 (376)
290 1kv9_A Type II quinohemoprotei 94.2 2.7 9.1E-05 36.7 21.6 77 136-213 384-498 (668)
291 2j04_B YDR362CP, TAU91; beta p 93.9 2.6 8.8E-05 35.7 19.7 194 3-202 211-426 (524)
292 3fm0_A Protein CIAO1; WDR39,SG 93.9 1.8 6.3E-05 33.9 28.2 151 3-160 65-221 (345)
293 2hes_X YDR267CP; beta-propelle 93.6 2.1 7E-05 33.4 24.4 196 3-204 62-280 (330)
294 3ott_A Two-component system se 93.5 3.7 0.00013 36.2 22.9 190 4-210 67-266 (758)
295 2pm7_B Protein transport prote 93.3 2.1 7E-05 32.7 23.2 197 3-202 57-283 (297)
296 3gre_A Serine/threonine-protei 92.9 3.1 0.00011 33.5 23.6 151 11-167 181-362 (437)
297 2j04_B YDR362CP, TAU91; beta p 92.7 1.9 6.5E-05 36.4 12.2 152 3-163 270-427 (524)
298 1w6s_A Methanol dehydrogenase 92.4 4.9 0.00017 34.6 24.1 155 11-169 62-292 (599)
299 3bg1_A Protein SEC13 homolog; 92.3 3.1 0.0001 32.1 19.9 197 3-203 17-246 (316)
300 4gga_A P55CDC, cell division c 91.0 5.2 0.00018 32.2 31.2 217 2-229 150-376 (420)
301 2hes_X YDR267CP; beta-propelle 89.8 5.8 0.0002 30.7 26.8 192 3-203 18-229 (330)
302 1kv9_A Type II quinohemoprotei 89.4 10 0.00035 33.0 23.9 151 11-169 66-284 (668)
303 3vu4_A KMHSV2; beta-propeller 89.0 7 0.00024 30.7 25.5 206 3-228 23-251 (355)
304 3b7f_A Glycosyl hydrolase, BNR 88.4 8.4 0.00029 30.8 19.0 211 4-227 119-392 (394)
305 4gq1_A NUP37; propeller, trans 88.2 8.7 0.0003 30.6 20.6 73 4-77 141-220 (393)
306 3vu4_A KMHSV2; beta-propeller 87.8 8.5 0.00029 30.2 23.8 182 5-203 64-270 (355)
307 4gq1_A NUP37; propeller, trans 87.1 10 0.00034 30.3 17.9 158 2-164 189-389 (393)
308 3bg1_A Protein SEC13 homolog; 85.0 11 0.00038 28.8 19.5 198 3-203 61-292 (316)
309 4ggc_A P55CDC, cell division c 83.8 12 0.0004 28.1 25.7 154 44-200 151-311 (318)
310 4gga_A P55CDC, cell division c 83.5 16 0.00054 29.3 27.4 177 24-203 210-394 (420)
311 1yiq_A Quinohemoprotein alcoho 83.3 23 0.00077 31.0 24.6 150 11-168 70-288 (689)
312 1xip_A Nucleoporin NUP159; bet 81.4 20 0.00068 29.0 17.3 159 4-183 42-222 (388)
313 1yiq_A Quinohemoprotein alcoho 79.0 32 0.0011 30.0 23.7 65 155-220 455-522 (689)
314 1w6s_A Methanol dehydrogenase 78.9 31 0.001 29.7 25.3 85 135-220 395-520 (599)
315 3ii7_A Kelch-like protein 7; p 78.7 19 0.00066 27.3 21.8 207 11-230 55-297 (306)
316 3a0f_A Xyloglucanase; beta-pro 77.3 38 0.0013 30.0 19.4 204 2-210 23-290 (763)
317 3b7f_A Glycosyl hydrolase, BNR 76.9 26 0.0009 27.8 18.9 172 3-182 180-390 (394)
318 4ggc_A P55CDC, cell division c 76.9 21 0.00072 26.7 29.6 215 3-228 71-295 (318)
319 2j04_A TAU60, YPL007P, hypothe 75.9 37 0.0013 29.1 25.2 167 2-182 88-273 (588)
320 1sqj_A OXG-RCBH, oligoxylogluc 75.5 44 0.0015 29.7 22.0 204 2-211 17-276 (789)
321 2hz6_A Endoplasmic reticulum t 74.3 0.98 3.4E-05 36.2 1.1 176 10-210 8-199 (369)
322 2xbg_A YCF48-like protein; pho 73.2 30 0.001 26.8 22.4 187 4-203 126-321 (327)
323 3sbq_A Nitrous-oxide reductase 73.0 45 0.0015 28.7 20.1 187 11-203 142-407 (638)
324 2cn3_A Xyloglucanase, beta-1,4 71.5 53 0.0018 28.9 20.8 204 3-211 26-290 (737)
325 2xn4_A Kelch-like protein 2; s 71.0 31 0.0011 26.0 22.1 206 11-228 61-300 (302)
326 2xbg_A YCF48-like protein; pho 70.3 35 0.0012 26.4 24.0 191 4-210 84-285 (327)
327 3sbq_A Nitrous-oxide reductase 69.6 55 0.0019 28.2 13.9 133 43-178 322-494 (638)
328 1flg_A Protein (quinoprotein e 67.5 58 0.002 27.8 24.5 97 91-192 416-547 (582)
329 3s9j_A Member of DUF4221 famil 62.8 23 0.00078 28.5 6.8 71 144-214 39-120 (369)
330 1flg_A Protein (quinoprotein e 61.6 76 0.0026 27.0 21.2 77 137-214 416-527 (582)
331 1sqj_A OXG-RCBH, oligoxylogluc 54.5 1.2E+02 0.004 27.0 22.2 206 2-211 66-340 (789)
332 2woz_A Kelch repeat and BTB do 48.0 88 0.003 23.7 14.8 168 11-189 109-312 (318)
333 3a0f_A Xyloglucanase; beta-pro 44.4 1.7E+02 0.0057 25.9 18.4 164 44-210 21-219 (763)
334 1zgk_A Kelch-like ECH-associat 40.3 1.2E+02 0.004 22.9 20.2 186 11-210 24-246 (308)
335 2zuy_A YESX protein; beta-prop 39.7 1.9E+02 0.0063 25.0 18.3 131 26-163 275-426 (620)
336 2vpj_A Kelch-like protein 12; 37.5 1.3E+02 0.0043 22.5 25.1 190 11-210 62-284 (301)
337 2uvk_A YJHT; unknown function, 36.0 1.5E+02 0.005 22.8 18.2 189 11-211 19-301 (357)
338 2cn3_A Xyloglucanase, beta-1,4 31.9 2.6E+02 0.0089 24.5 20.2 119 45-164 24-164 (737)
339 1zgk_A Kelch-like ECH-associat 29.9 1.8E+02 0.006 21.8 22.1 187 11-210 70-293 (308)
340 4hvt_A Ritya.17583.B, post-pro 29.4 2.9E+02 0.01 24.2 16.8 116 52-170 296-435 (711)
341 2zux_A YESW protein; beta-prop 29.0 2.8E+02 0.0095 23.8 17.8 132 26-164 271-423 (591)
342 2vpj_A Kelch-like protein 12; 28.9 1.8E+02 0.0061 21.6 24.6 175 24-210 32-237 (301)
343 2hz6_A Endoplasmic reticulum t 27.5 1.1E+02 0.0037 24.0 5.5 63 144-208 9-73 (369)
344 3s9j_A Member of DUF4221 famil 25.8 2.5E+02 0.0086 22.3 8.6 68 100-170 41-116 (369)
345 3f6k_A Sortilin; protein sorti 23.9 3.7E+02 0.013 23.6 19.9 154 47-214 93-267 (685)
346 1k3i_A Galactose oxidase precu 23.4 3.5E+02 0.012 23.1 15.4 221 4-229 247-521 (656)
No 1
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=9.9e-42 Score=274.39 Aligned_cols=222 Identities=31% Similarity=0.622 Sum_probs=200.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|++++||+.++.|||+|...+ +|+++.++|... +.++..++..|.||++||.+++|||+|...++|.+++++|...+.
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~-~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEE-AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTT-EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cEEEEEEeCCCEEEEEECCCC-cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 679999999999999999999 999999998753 456666788999999999999999999999999999999999888
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+....+..|+++++||.+|.|||+|++ ..++|++++++|...+.++... +..|+||++|+.+++|||+|...++|+++
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEEEECC-CCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 887789999999999989999999986 3578999999999988888766 89999999999889999999999999999
Q ss_pred ecCCCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 161 TIRNRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 161 ~~~g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+++|..++++.+ .+.+|+|++++++.+||+|+.+++|.++++. |+..+.+.. ....|++|++++++
T Consensus 194 d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~---~~~~P~~i~v~~~~ 261 (318)
T 3sov_A 194 NLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS---DIFSPMDIHAFSQQ 261 (318)
T ss_dssp ETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC---CCSSCCCEEEECGG
T ss_pred cCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeC---CCCCCcEEEEeccc
Confidence 999998888876 7899999999999999999999999999995 777776653 34689999998764
No 2
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=3.2e-41 Score=279.53 Aligned_cols=223 Identities=26% Similarity=0.558 Sum_probs=199.5
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.|++++||+.++.|||+|...+ +|++++++| ...+.++...+..|.|||+||.+++|||+|..+++|.+++++|.
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~-~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred cceEEeeeeccCceEEEecCCC-eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 4789999999999999999999 999999998 34556676688999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
.+.+++...+..|++|++||.++.|||+|++. .++|++++++|...+.++... +..|+||++|+.+++|||+|...++
T Consensus 192 ~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~-~~~I~~~~~dG~~~~~~~~~~-l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 192 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp SEEEEEECSSCCEEEEEEETTTTEEEEEECSS-SCCEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEeCCCCCcceEEEecccCeEEEEeCCC-CCEEEEEeCCCCccEEEEECC-CCceEEEEEEeCCCEEEEEECCCCE
Confidence 99888888899999999999999999999873 578999999999999888766 8999999999999999999999999
Q ss_pred EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
|++++++|..++++.. .+.+|.||++++++|||+||.+++|.++++ .|+..+++. .+...|++|+++++.
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~---~~~~~p~~i~v~~~~ 343 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNL 343 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE---CSCSCEEEEEEESGG
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe---cCCCCCceEEEEeec
Confidence 9999999998888865 588999999999999999999999999996 577777665 345689999999864
No 3
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=2.1e-41 Score=293.83 Aligned_cols=225 Identities=34% Similarity=0.664 Sum_probs=205.3
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
+|.+++||+.++.|||+|...+ +|+++.++|+..+.++..++..|.|||+||.+++|||+|...++|.+++++|..+++
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~-~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVR-AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCC-eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 4789999999999999999988 999999999888788877889999999999999999999999999999999999988
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+....+..|++||+||.+|.|||+|++. .++|+++.++|...++++... +.+|+||++|+.+++|||+|...++|+++
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~-~~~I~r~~~dG~~~~~l~~~~-l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGE-IPKIERAALDGSDRVVLVNTS-LGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCC-CCEEEEEccCCCccEEEEeCC-CCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 8888899999999999889999999974 689999999999999888766 99999999999999999999999999999
Q ss_pred ecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCCC
Q psy5751 161 TIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231 (232)
Q Consensus 161 ~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~~ 231 (232)
+++|..++++. ..+.+|+|||+++++|||||+.+++|.++++.+...+++. .....|++|++++.+|+
T Consensus 507 ~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~~~~---~~~~~~~~i~~~~~~~~ 575 (619)
T 3s94_A 507 NTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVII---DQLPDLMGLKATNVHRV 575 (619)
T ss_dssp ESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEEEEE---CSCCCEEEEEEEESSCC
T ss_pred ecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceEEEe---cCCCCCceeeecccccc
Confidence 99999888775 5889999999999999999999999999999866554443 45678999999988764
No 4
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-41 Score=275.43 Aligned_cols=223 Identities=35% Similarity=0.676 Sum_probs=202.2
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|.+++||+.++.|||+|...+ +|++++++|...+.++..++..|.||++||.+++|||+|...++|.+++++|.....
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ceEEEEEeccccEEEEEeccCC-ceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 3789999999999999999999 999999999887777777888999999999999999999999999999999999888
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+....+..|+++++||.++.|||+|+.. .++|++++++|...+.++... +..|+||++|+.+++|||+|...++|+++
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEESCCSS-CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCCcEEEEECC-CCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 8887889999999999999999999873 489999999999988877665 88999999999899999999999999999
Q ss_pred ecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 161 TIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 161 ~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+++|..++++. ..+.+|+||+++++.||||||.+++|.++++ +|+..+.+. .....|+||++++++
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~---~~~~~p~gi~v~~~~ 298 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR---NKLHFPMDIHTLHPQ 298 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE---CSCSCCCCEEEECGG
T ss_pred eCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec---cCCCCCceEEEEccc
Confidence 99998877765 4789999999999999999999999999995 687777765 346789999999864
No 5
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=2.4e-41 Score=293.84 Aligned_cols=224 Identities=29% Similarity=0.628 Sum_probs=204.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|++++||+.++.|||+|...+ +|+++.++|+..+.++..++..|.|||+||.+++|||+|...++|.+++++|..+++
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~-~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLK-TISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred ceEEEEEECCCCEEEEEECCCC-eEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 4789999999999999999999 999999999888788877888999999999999999999999999999999999988
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+....+..|++||+||.+|.|||+|++. .++|++++++|...++++.. +..|+||++|+.+++|||+|...++|+++
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~-~~~I~r~~~dG~~~~~l~~~--~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGG-KPKIDRAAMDGSERTTLVPN--VGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECS--CSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCC-CCEEEEEeCCCCceEEEECC--CCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 8877899999999999999999999863 68999999999999988864 89999999999999999999999999999
Q ss_pred ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCCC
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSCP 231 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~~ 231 (232)
+++|..++++...+.+|.||++++++||||||.+++|.++++. |+..+.+. .+...|++|+|++++|+
T Consensus 194 d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~---~~~~~p~~i~v~~~~~q 262 (628)
T 4a0p_A 194 NMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQ---GHLDYVMDILVFHSSRQ 262 (628)
T ss_dssp ETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE---CSCCSCCEEEEECGGGS
T ss_pred cCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEe---cCCCCcceeeeeeeccc
Confidence 9999988877889999999999999999999999999999986 66666554 34567999999998654
No 6
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=4.4e-41 Score=292.13 Aligned_cols=225 Identities=27% Similarity=0.447 Sum_probs=202.1
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC------CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT------NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN 74 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~------~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~ 74 (232)
++.+++||+.++.|||+|...+ +|+++.++|+..++++.. .+..|.|||+||.+++|||+|...++|.+++++
T Consensus 341 ~~~~ld~d~~~~~iy~sD~~~~-~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 341 NVRAIDYDPLDKQLYWIDSRQN-MIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEecCCCeEEEEecCcc-eEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 3789999999999999999999 999999999887666654 567899999999999999999999999999999
Q ss_pred CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
|..+.+++...+..|++||+||.+|.|||+|++...++|++++++|...++++... +.+|+||++|+.+++|||+|...
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~-l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSG-LSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEecc-CCCccEEEEeCCCCEEEEEeCCC
Confidence 99888888888999999999999999999999854348999999999999998876 99999999999999999999999
Q ss_pred CcEEEEecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 155 KSLECMTIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
++|++++++|..++++. ..+.+|+||++++++|||||+.+++|.++++. |+..+.+.. ....|.+|++++..+
T Consensus 499 ~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~---~~~~~~~i~~~~~~~ 573 (628)
T 4a0p_A 499 RRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQA---RIAQLSDIHAVKELN 573 (628)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEEC---CCTTEEEEEEECCCC
T ss_pred CEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEec---cCCCCcceEEEeecc
Confidence 99999999999999887 57899999999999999999999999999998 777776653 345789999988765
No 7
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-40 Score=275.24 Aligned_cols=223 Identities=35% Similarity=0.676 Sum_probs=202.7
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|.+++||+.++.|||+|...+ +|++++++|...+.++..++..|.||++||.+++|||+|...++|.+++++|.....
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred ccEEEEEecCCCeEEEEeCCCC-cEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 3789999999999999999999 999999999887777777888999999999999999999999999999999999888
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
++...+..|+++++||.++.|||+|+.. .++|++++++|...+.++... +..|+||++|+.+++|||+|...++|+++
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCC-CCEEEEEeCCCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 8888889999999999999999999873 489999999999998888766 88999999999889999999999999999
Q ss_pred ecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 161 TIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 161 ~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+++|..++++. ..+.+|+||+++++.||||+|.+++|.++++ +|+..+++. .....|+||++++++
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~---~~~~~p~gi~v~~~~ 341 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR---NKLHFPMDIHTLHPQ 341 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE---CSCSCCCCEEEESGG
T ss_pred eCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc---cCCCCCceEEEEchh
Confidence 99998877765 4789999999999999999999999999995 687777775 345789999999864
No 8
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=5.2e-40 Score=264.49 Aligned_cols=224 Identities=26% Similarity=0.551 Sum_probs=195.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.|++++||+.++.|||+|...+ +|++++++| ...+.++...+..|.||++||.+++|||+|...++|.+++++|.
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~-~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEEEEeCCCEEEEEECCCC-cEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 3789999999999999999988 999999997 44445565667899999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
..+.++...+..|+++++||.++.|||++++. .++|++++++|...+++.... +..|+||++|+.+++|||+|...++
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-~~~I~~~~~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCC-CCeEEEEcCCCCCeEEEEECC-CCCceEEEEeccCCEEEEEECCCCe
Confidence 88888877889999999999899999999863 478999999999988877665 8999999999999999999999999
Q ss_pred EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
|++++++|..++++.. .+.+|.||++++++|||+++.+++|.++++. |+..+.+. .+...|+||++++++.
T Consensus 188 I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~---~~~~~p~~i~v~~~~~ 262 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNLT 262 (316)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE---CSCSCCCCEEEESGGG
T ss_pred EEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe---cCCCCceEEEEecccc
Confidence 9999999998888864 5789999999999999999999999999985 77777664 3456899999998643
No 9
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=290.96 Aligned_cols=223 Identities=26% Similarity=0.553 Sum_probs=198.4
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC----ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGK----NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~----~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.|++++||+.++.|||+|...+ +|+++.++|. ....++...+..|.|||+||.+++|||+|..+++|++++++|.
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~-~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEeecccCCeeEEeeccce-eEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 3789999999999999999998 9999999984 3455666688999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
.+++++...+..|++|||||.+|+|||+|++. .++|++++++|..+++++... +.+|+||+||+.+++|||+|...++
T Consensus 504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG~~~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEEeCCCCCcceEEEecCCCCEEEecCCC-CCeEEEEecCCCceEEEEeCC-CCCceEEEEecCCCeEEEEeCCCCc
Confidence 99898888899999999999899999999873 478999999999999888876 8999999999999999999999999
Q ss_pred EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
|++++++|..+++++. .+.+|.||++++++|||||+.+++|.++++. |+..+++. .+...|++|+|+++.
T Consensus 582 I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~---~~l~~P~~i~v~h~~ 655 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNL 655 (791)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE---CSCSCCCCEEEESGG
T ss_pred EEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee---cCCCCceeEeeeccc
Confidence 9999999999888865 5789999999999999999999999999976 66666664 457789999999864
No 10
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=2e-40 Score=287.72 Aligned_cols=222 Identities=31% Similarity=0.618 Sum_probs=190.7
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.|++++|++.++.|||+|...+ +|+++.++|... +.++..++..|.|||+||.+++|||+|...++|.+++++|..++
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~-~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEE-AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ceEEEEEEeCCCEEEEEECCCC-eEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 4789999999999999999999 999999998753 56677778899999999999999999999999999999999998
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
++....+..|++||+||.+|.|||+|++. .++|++++++|...++++... +.+|+||++|+.+++|||+|...++|++
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~-~~~I~r~~~dG~~~~~l~~~~-~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGE-VPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCC-CCEEEEEECCCCceEEEEeCC-CCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 88877899999999999899999999874 689999999999999988766 8999999999999999999999999999
Q ss_pred EecCCCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751 160 MTIRNRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 160 ~~~~g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
++++|..++++.. .+.+|+||++++++||||||.+++|.++++. |+..+.+. .+...|+||+++++
T Consensus 198 ~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~---~~~~~p~~i~v~~~ 265 (619)
T 3s94_A 198 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH---SDIFSPMDIHAFSQ 265 (619)
T ss_dssp ESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECC---SCCCCCSEEEECCG
T ss_pred ecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEe---cCCCCCcEEEEEcc
Confidence 9999998888866 8899999999999999999999999999997 45544442 44668999999976
No 11
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=100.00 E-value=9.2e-38 Score=245.42 Aligned_cols=227 Identities=40% Similarity=0.790 Sum_probs=197.9
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
|.++++|+.++.|||+|...+ +|++++++|.....++...+..|.+|++|+.++.|||+|...++|.+++++|...+.+
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEP-SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTT-EEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEEEEEecCCCEEEEEECCCC-EEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 679999999999999999988 9999999988766666666789999999998899999999999999999999888777
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
....+..|+++++|+.+++|||++.....++|++++++|...+.+.... +..|++|++|+++++|||+|...++|.+++
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 7666789999999998899999997644578999999998887776555 789999999998899999999999999999
Q ss_pred cCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCCCC
Q psy5751 162 IRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSCPG 232 (232)
Q Consensus 162 ~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~~~ 232 (232)
++|..++.+...+..|.|+++++++|||+++.+++|.++++. |+..+.+. ......|+||++.+++||.
T Consensus 196 ~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~--~g~~~~p~gi~~~~~~~~~ 265 (267)
T 1npe_A 196 PAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH--PHKQTRLYGITIALSQCPQ 265 (267)
T ss_dssp TTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC--CSSCCCCCCEEEECSCC--
T ss_pred cCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc--cccccccceeeecCccCCC
Confidence 998877777778899999999999999999999999999998 55555553 2334479999999999993
No 12
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=3.6e-37 Score=270.92 Aligned_cols=224 Identities=26% Similarity=0.548 Sum_probs=193.9
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.|++++|++.++.|||+|...+ +|+++++++ .....++...+..|.||++||.+++|||+|...++|.+++++|.
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~-~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTT-SBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred ceEEEccccccCeEEEEecCCC-eEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 3678999999999999999999 999999997 44444555567889999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
.+++++...+..|++||+||.+++|||++++. .++|++++++|...++++... +..|+||+||+.+++|||+|...++
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~-~~~I~~~~~dG~~~~~l~~~~-l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSS-SCCEEBCCSSSCCCCEESCSS-CSSCCCEEECTTTCCEEEEETTTTE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCC-CCeEEEEeCCCCCeeEEEeCC-CCCccEEEEeccCCEEEEEecCCCe
Confidence 88888777788999999999899999999863 478999999999888777665 8999999999999999999999999
Q ss_pred EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
|++++++|..+++++. .+.+|.||++++++|||++|.+++|.++++. |+..++|. .+...|++|+|+++..
T Consensus 564 I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~---~~~~~P~~i~v~~~~~ 638 (699)
T 1n7d_A 564 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHQLT 638 (699)
T ss_dssp EEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC---TTCSSCCCCCBCSSSS
T ss_pred EEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee---cCCCCCcEEEEeCccc
Confidence 9999999988888864 5789999999999999999999999999986 66555553 3356799999998764
No 13
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-31 Score=218.59 Aligned_cols=209 Identities=26% Similarity=0.476 Sum_probs=183.1
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
+..|++++.. .|++++++|.....++ ..+..|.+|++|+..+.|||+|...++|++++++|...+.++...+..|.
T Consensus 44 ~~~ll~~~~~---~I~~i~~~g~~~~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~ 119 (349)
T 3v64_C 44 EPVLLFANRI---DIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG 119 (349)
T ss_dssp CCEEEEECBS---CEEEECTTSCCEEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred CceeEeeccc---ceEEEeCCCCeeEEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc
Confidence 5678887644 7999999998764444 56789999999998999999999999999999999988888877888999
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCceEE
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVRRK 169 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~~~ 169 (232)
|+|+|+.++.|||++.. ..+|++++++|...++++... +..|++|++|+.++.|||+|... ++|++++++|..++.
T Consensus 120 glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 196 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 196 (349)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEEEecCCCeEEEEcCC--CCeEEEEcCCCCceEEEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 99999989999999986 568999999999888887765 89999999999889999999998 999999999998877
Q ss_pred Eec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 170 VYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 170 ~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+.. .+..|.||+++ +++|||+|+..++|.+++.+|+..+.+.. .....|+||+++++
T Consensus 197 ~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~--~~~~~P~giav~~~ 256 (349)
T 3v64_C 197 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPFAITVFED 256 (349)
T ss_dssp SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SSCSSEEEEEEETT
T ss_pred EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe--CCCCCceEEEEECC
Confidence 754 78899999997 78999999999999999999987775543 34779999999764
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=3e-31 Score=219.69 Aligned_cols=211 Identities=18% Similarity=0.371 Sum_probs=182.0
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC----CCCEEEEeCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND----DQPKVIVSKDL 86 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~ 86 (232)
...|++++- + .|+++++++.....++ ..+..|.+|++|+..+.|||+|...++|++.+++| .....++...+
T Consensus 83 ~~~ll~~~~--~-~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 83 IAYLFFTNR--H-EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp SCEEEEEET--T-EEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred cceeEEecc--c-eeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 457788775 3 8999999988765554 56789999999999999999999999999999998 44667777788
Q ss_pred CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCC
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNR 165 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~ 165 (232)
..|.|+|+|+.++.|||+|.. ..+|.+++++|....+++... +..|++|++|+.+++|||+|.+. ++|++++++|.
T Consensus 159 ~~p~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETT--TTEEEEECTTTCSEEEEEECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCcccEEEEecCCceEEEECC--CCeEEEEeCCCCceEEEEeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 899999999989999999986 568999999999988888766 89999999999889999999874 89999999999
Q ss_pred ceEEEec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 166 VRRKVYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 166 ~~~~~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
.++.+.. .+..|.||+++ +++|||+|+..++|.+++.+|...+++........+|+||+++++
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 301 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC
Confidence 8877754 78999999997 789999999999999999999888877654445789999999875
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-31 Score=218.71 Aligned_cols=209 Identities=26% Similarity=0.477 Sum_probs=183.0
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
...|++++.. .|+++++++.....++ ..+..|.+|++|+..+.|||+|...++|++++++|...+.++...+..|.
T Consensus 87 ~~~l~~~~~~---~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~ 162 (386)
T 3v65_B 87 EPVLLFANRI---DIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG 162 (386)
T ss_dssp CCEEEEECBS---CEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC
T ss_pred cceeEeecCc---cceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc
Confidence 5677777653 7999999987764444 56789999999998999999999999999999999988777777888999
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCceEE
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVRRK 169 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~~~ 169 (232)
|+|+|+.++.|||++.. ..+|++++++|...++++... +..|++|++|+.+++|||+|... ++|++++++|..++.
T Consensus 163 glavd~~~g~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 239 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 239 (386)
T ss_dssp CEEEETTTTEEEEEETT--TTEEEECBTTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEEEEeCCCeEEEEcCC--CCeEEEEeCCCCceEEeecCC-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 99999989999999987 568999999999888888765 89999999999889999999998 899999999998877
Q ss_pred Ee-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 170 VY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 170 ~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+. ..+..|.||+++ +++|||+|+.+++|.+++.+|+..+.+.. .+...|+||+++++
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P~giav~~~ 299 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPFAITVFED 299 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC--SSCSSEEEEEEETT
T ss_pred EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE--CCCCCceEEEEECC
Confidence 75 478899999996 89999999999999999999987775543 34779999999764
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=2.7e-30 Score=207.83 Aligned_cols=209 Identities=18% Similarity=0.374 Sum_probs=176.2
Q ss_pred EEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC----CCCEEEEeCCCCC
Q psy5751 13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND----DQPKVIVSKDLVN 88 (232)
Q Consensus 13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~~~ 88 (232)
.|++++-. .|.++++++.....++ ..+..|.++++|+.++.|||+|...++|++++++| .....++...+..
T Consensus 3 ~ll~~~~~---~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 3 YLFFTNRH---EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp EEEEECBS---SEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred EEEEECCC---eEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 56777654 7999999987765554 46789999999998899999999999999999998 4556666667789
Q ss_pred ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCce
Q psy5751 89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVR 167 (232)
Q Consensus 89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~ 167 (232)
|.++|+|+.++.|||+|.. ..+|.+++++|.....++... +..|+++++|+.+++|||+|... ++|++++++|..+
T Consensus 79 p~glavd~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred cCEEEEeecCCeEEEEECC--CCEEEEEeCCCCceEEEEECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 9999999889999999976 578999999999888877755 88999999999889999999886 8999999999988
Q ss_pred EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+.+. ..+..|.||+++ +++|||+|+.+++|.+++.+|+..+++.........|+||+++++
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~ 219 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 219 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECC
Confidence 7775 478999999997 789999999999999999999888766543334678999999753
No 17
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.3e-30 Score=230.72 Aligned_cols=211 Identities=18% Similarity=0.367 Sum_probs=180.8
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC----CCEEEEeCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD----QPKVIVSKDL 86 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~----~~~~~~~~~~ 86 (232)
...|++++.. .|+++.+++.....++ ..+..|.+|++|+..++|||+|..+++|++++++|. ....++...+
T Consensus 395 ~p~Ll~an~~---~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 395 IAYLFFTNRH---EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp CCEEEEECBS---SEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred cccccccccc---ceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence 3467777654 7999999987764444 567899999999999999999999999999999985 4566676788
Q ss_pred CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCC
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNR 165 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~ 165 (232)
..|.|||+|+.++.|||+|.. ..+|++++++|...++++... +..|.+|+||+.+++|||+|.+. ++|++++++|.
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~--~~~I~v~~ldG~~~~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceeeeeecCCcEEEEecC--CCeEEEEeCCCCeEEEEEeCC-CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 999999999989999999986 568999999999998888766 88999999999999999999886 89999999999
Q ss_pred ceEEEec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 166 VRRKVYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 166 ~~~~~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
.++++.. .+.+|.||+++ +++|||+|+..++|.+++.+|...+++.........|+||+++++
T Consensus 548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~ 613 (791)
T 3m0c_C 548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 613 (791)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC
Confidence 9887765 78999999998 899999999999999999999988877654445779999999865
No 18
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=1.1e-30 Score=209.99 Aligned_cols=210 Identities=21% Similarity=0.434 Sum_probs=177.9
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEeCCCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVSKDLVN 88 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~ 88 (232)
.-.|++++- + .|.++++++.. ...++..++..+.+|++|+..+.|||+|...++|++++++|... ..++...+..
T Consensus 4 ~p~ll~~~~--~-~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 4 APLLLYANR--R-DLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp CCEEEEECE--E-EEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred ccEEEEEcc--C-eEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 346777773 3 79999999874 22344445678889999988899999999999999999999853 4555567889
Q ss_pred ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC-CCcEEEEecCCCce
Q psy5751 89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD-SKSLECMTIRNRVR 167 (232)
Q Consensus 89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~~~~~g~~~ 167 (232)
|.|+|+|+.++.|||+|.. ..+|.+++++|...+++.... +..|++|++|+.+++|||+|.. .++|++++++|..+
T Consensus 81 p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSE--TNRIEVSNLDGSLRKVLFWQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEEcCCCeEEEEECC--CCEEEEEECCCCcEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 9999999989999999986 568999999999888887665 8999999999988999999976 68999999999888
Q ss_pred EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+.+. ..+..|.||+++ +++|||+|+.+++|++++.+|+..+++.. .....|+||+++++
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P~glav~~~ 219 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED 219 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SCCSCEEEEEEETT
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec--CCCCCceEEEEeCC
Confidence 7775 578999999997 78999999999999999999988876653 34789999999865
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.97 E-value=5.4e-28 Score=189.63 Aligned_cols=207 Identities=26% Similarity=0.497 Sum_probs=172.6
Q ss_pred CEEEEEEcCCCCcEEEEEcCCCcee-----EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCC
Q psy5751 12 GQVYYSSVADKSSIKRAHLDGKNVE-----DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDL 86 (232)
Q Consensus 12 ~~ly~~d~~~~~~i~~~~~~g~~~~-----~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 86 (232)
..||+++. + +|++++++|...+ .++......|.++++|+.++.|||+|...++|++++++|.....+....+
T Consensus 2 ~~l~~~~~--~-~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT--G-KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE--E-EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC--C-eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 46888884 3 8999999986532 23333346899999999889999999999999999999988777776677
Q ss_pred CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCC
Q psy5751 87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRN 164 (232)
Q Consensus 87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g 164 (232)
..|.++++|+.++.|||++.. .++|.+++++|...+.+.... +..|+++++|+.+++|||++.. .++|++++++|
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCEEEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 899999999988999999976 568999999998877776654 7899999999988999999987 67999999999
Q ss_pred CceEEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751 165 RVRRKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 165 ~~~~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
...+.+. ..+..|.|++++ +++|||++..+++|.+++++|...+.+. .+...|.||++..
T Consensus 156 ~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~---~~~~~P~gi~~d~ 218 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL---EGLQYPFAVTSYG 218 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE---ECCCSEEEEEEET
T ss_pred CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe---cCCCCceEEEEeC
Confidence 8777665 467889999997 5799999999999999999976555442 2456899999864
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.95 E-value=5.4e-28 Score=212.74 Aligned_cols=209 Identities=18% Similarity=0.369 Sum_probs=171.0
Q ss_pred EEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC----CCCEEEEeCCCCC
Q psy5751 13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND----DQPKVIVSKDLVN 88 (232)
Q Consensus 13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~~~ 88 (232)
.|++++. . .|+++++++.....+ ...+..|.+|++|+..+.|||+|...++|+++++++ .....++...+..
T Consensus 379 ~ll~~~~--~-~I~~id~~~~~~~~~-~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~ 454 (699)
T 1n7d_A 379 YLFFTNR--H-EVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 454 (699)
T ss_dssp CBCCCCT--T-C-CEECTTSCCEECC-SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--
T ss_pred eEEecCc--c-ceEEEeCCCCcceee-eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCC
Confidence 4555443 3 788999988765333 345689999999998999999999999999999997 4444555556788
Q ss_pred ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCce
Q psy5751 89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVR 167 (232)
Q Consensus 89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~ 167 (232)
|.+||+|+.++.|||++.. .++|.+++++|....+++... +..|++|++|+.+++|||+|... ++|++++++|..+
T Consensus 455 P~glavD~~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 531 (699)
T ss_dssp CCCEECCCSSSBCEECCTT--TSCEEEEBSSSCCEEEECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC
T ss_pred cceEEEEeeCCcEEEEecc--CCeEEEEecCCCceEEEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe
Confidence 9999999889999999976 567999999999888777655 88999999999889999999876 8999999999888
Q ss_pred EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+++. ..+..|.|||++ +++|||+|+.+++|.+++.+|...+++.........|+||+++.+
T Consensus 532 ~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 532 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 595 (699)
T ss_dssp CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT
T ss_pred eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC
Confidence 7775 478999999996 689999999999999999999887766543344678999999864
No 21
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=2.5e-24 Score=179.81 Aligned_cols=221 Identities=11% Similarity=0.118 Sum_probs=171.7
Q ss_pred CeEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCC----eEEEEeCCC
Q psy5751 1 MLIGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMD----TISMANLND 75 (232)
Q Consensus 1 ~~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~----~I~~~~~~g 75 (232)
.|.++++|+ .++.||++|.. + +|+++++++.....+. .....|.+|++|+.++.||++|...+ .++..+.+|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~-~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-H-PTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-E-EEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCC-C-cEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 478999998 58999999987 6 8999999987765554 46789999999998788999998543 577788888
Q ss_pred CCC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 76 DQP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 76 ~~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
... ..+. .+..|.+++++|.++.||++++. .++|+++++++.....+........|++|++|+++++|||+|..
T Consensus 215 ~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~--~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 215 GFKVITELT--KGQNCNGAETHPINGELYFNSWN--AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp TSCSEEEEE--ECSSCCCEEECTTTCCEEEEETT--TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred ceeeeeeec--cCCCceEEEEeCCCCEEEEEECC--CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 765 3333 47889999999988999999986 57899999998765444443325689999999997789999999
Q ss_pred CCcEEEEecCCCc-----eEEEec---------------CCCceE-EEEEE---------CCEEEEEeCCCCcEEEEeCC
Q psy5751 154 SKSLECMTIRNRV-----RRKVYS---------------NCTYPF-GLSIT---------DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 154 ~~~i~~~~~~g~~-----~~~~~~---------------~~~~p~-gla~~---------~~~ly~td~~~~~i~~~~~~ 203 (232)
.++|+++++++.. ...++. .+..|. |++++ ++.|||+|+.+++|.+++++
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~ 370 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ 370 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC
Confidence 9999999998742 222321 367799 89885 36999999999999999988
Q ss_pred CCCcceEEec-----c---------CCcceeEEEEEEcC
Q psy5751 204 GERAPSIALD-----M---------MGTTYMYGIAAVPS 228 (232)
Q Consensus 204 g~~~~~i~~~-----~---------~~~~~p~gi~~~~~ 228 (232)
|...+..... . .....|.||++.++
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~ 409 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEE 409 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETT
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECC
Confidence 7443333210 0 01457999999873
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.93 E-value=2e-24 Score=171.92 Aligned_cols=187 Identities=13% Similarity=0.207 Sum_probs=152.4
Q ss_pred EEEeCCCCEEEEEE---cCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 5 ITVDCVEGQVYYSS---VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 5 i~~d~~~~~ly~~d---~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+...+++|||++ .... .|++++++|+..+++..... ++++|.++.|||++.....|++++++|..++.+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~-~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTAT-SLYRIRIDGEEKKKIKNHYL-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCE-EEEEEETTSCCCEEEESSCC-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCc-eEEEEECCCCCeEEEeCCCc-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 34556789999999 4445 89999999998776665432 457888999999999888999999999988777
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE-ECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV-DADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~-d~~~~~i~~~ 160 (232)
.. .+...+++|..+.|||+++.. ..+|++++++|...+++.... + | .+++.+++|||+ +...+.|+++
T Consensus 183 ~~----~~~~~~~~P~g~~iy~t~~~~-~~~I~~~~ldG~~~~~Lt~~~-~--~---~~~~~g~~Iy~~~~~~~~~i~~~ 251 (302)
T 3s25_A 183 YD----CNCYKPVVLDDTNVYYMDVNR-DNAIVHVNINNPNPVVLTEAN-I--E---HYNVYGSLIFYQRGGDNPALCVV 251 (302)
T ss_dssp EC----SCEEEEEEEETTEEEEEEGGG-TTEEEEECSSSCCCEECSCSC-E--E---EEEEETTEEEEEECSSSCEEEEE
T ss_pred eC----CCccceeeecCCEEEEEEcCC-CcEEEEEECCCCCeEEEeCCC-c--c---eEEECCCEEEEEECCCCcEEEEE
Confidence 64 233456777899999999874 479999999999988876553 3 3 477878999998 5556899999
Q ss_pred ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSI 210 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i 210 (232)
++||+.++.+... ...++++++++|||+++..+.|.+++.+|+..+++
T Consensus 252 ~~DG~~r~~l~~~--~~~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~~~l 299 (302)
T 3s25_A 252 KNDGTGFKELAKG--EFCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIKA 299 (302)
T ss_dssp ETTSCCCEEEEES--CEEEEEECSSEEEEEETTTCCEEEEESSSCCSCEE
T ss_pred ECCCCccEEeeCC--ccceEEEeCCEEEEEECCCCeEEEEECCCCCceEe
Confidence 9999988888654 24578899999999999999999999999887765
No 23
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.93 E-value=5.3e-23 Score=170.80 Aligned_cols=221 Identities=14% Similarity=0.120 Sum_probs=169.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCC-eEEEEeCCCCCCE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMD-TISMANLNDDQPK 79 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~ 79 (232)
.|.++++|+ ++.|||+|..++ +|+++++++.....+... ...|. +++++.++.||+++...+ +|++++.++....
T Consensus 132 ~P~~la~d~-~g~lyv~d~~~~-~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVG-NNTVLAYQRDDP-RVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECS-TTEEEEEETTTT-EEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeC-CCCEEEEecCCC-cEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 488999996 778999999888 999999998776566554 45677 999999999999998654 8999999887653
Q ss_pred EEE----eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE----cCCCCCcc-eEEEeCCCCEEEEE
Q psy5751 80 VIV----SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----AADLKLPN-SLAVDFRTDELCWV 150 (232)
Q Consensus 80 ~~~----~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----~~~~~~p~-~l~~d~~~~~Ly~~ 150 (232)
... ......|++++++|.++.||+++. .++|+++++++.....+.. ......|. +|++|+.+++||++
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDS---NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECT---TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEEC---CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 333 225678999999998899999874 4689999998776555421 11122355 99999988999999
Q ss_pred ECCCCcEEEEecCCCceEEEecC--------------CCceEEEEEE-CCEEEEEeC-CCCcEEEEe-CCCCCcceEEec
Q psy5751 151 DADSKSLECMTIRNRVRRKVYSN--------------CTYPFGLSIT-DEKYYWTDW-KTNRIESAN-KEGERAPSIALD 213 (232)
Q Consensus 151 d~~~~~i~~~~~~g~~~~~~~~~--------------~~~p~gla~~-~~~ly~td~-~~~~i~~~~-~~g~~~~~i~~~ 213 (232)
|...++|++++.+|......... +..|.|++++ ++.||++|+ .+++|.+++ ++|. ...+.-.
T Consensus 285 d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~ 363 (409)
T 3hrp_A 285 DQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQ 363 (409)
T ss_dssp ETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEEC
T ss_pred eCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCC
Confidence 99999999999998733333222 6789999997 678999999 999999999 5554 3333221
Q ss_pred --c----------CCcceeEEEEEEcCC
Q psy5751 214 --M----------MGTTYMYGIAAVPSS 229 (232)
Q Consensus 214 --~----------~~~~~p~gi~~~~~~ 229 (232)
. .....|.||++.++.
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCC
Confidence 0 114679999998764
No 24
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.93 E-value=2.9e-23 Score=173.36 Aligned_cols=219 Identities=11% Similarity=0.071 Sum_probs=164.4
Q ss_pred CeEEEEEeC--CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC----CeEEEEeCC
Q psy5751 1 MLIGITVDC--VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM----DTISMANLN 74 (232)
Q Consensus 1 ~~~~i~~d~--~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~ 74 (232)
.|.++++|+ .++.|||+|.. + +|+++++.+.....+. ..+..|.+|++|+.++ ||++|..+ ..+...+.+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~-~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-D-AFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-S-CEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCC-C-CEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 378999998 47999999988 6 8999999766654443 4678899999999666 99999753 236666666
Q ss_pred CCCC-EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 75 DDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 75 g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
+... ...+. .+..|.++++|+.++.|||++.. .++|++++.++... ..+........+.+|++|+++++||++|.
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~--~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH--HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT--CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECC--CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 6553 22232 57899999999989999999976 57899999984444 44444322456778999999888999999
Q ss_pred CCCcEEEEecCCCc-----eEEEec---------------CCCceEEEEE---------E-CCEEEEEeCCCCcEEEEeC
Q psy5751 153 DSKSLECMTIRNRV-----RRKVYS---------------NCTYPFGLSI---------T-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 153 ~~~~i~~~~~~g~~-----~~~~~~---------------~~~~p~gla~---------~-~~~ly~td~~~~~i~~~~~ 202 (232)
..++|+++++++.. ...++. .+..|.|+++ + ++.||++|+.+++|.++++
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 99999999988431 123322 3678999999 5 6899999999999999999
Q ss_pred CCCCcceEEecc--------------CCcceeEEEEEE
Q psy5751 203 EGERAPSIALDM--------------MGTTYMYGIAAV 226 (232)
Q Consensus 203 ~g~~~~~i~~~~--------------~~~~~p~gi~~~ 226 (232)
+|...+..-... .....|.|||+.
T Consensus 373 ~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd 410 (433)
T 4hw6_A 373 EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYD 410 (433)
T ss_dssp TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEE
T ss_pred CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEE
Confidence 874333221100 124579999998
No 25
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.90 E-value=8.6e-22 Score=153.74 Aligned_cols=218 Identities=17% Similarity=0.261 Sum_probs=163.2
Q ss_pred CeEEEEEeCCCCEEEE-EEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 1 MLIGITVDCVEGQVYY-SSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~-~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.|.++++++ ++.||+ ++...+ .|.+++..+.............|.+|++|+. +.||+++. .+.|.+++.++....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYG-RVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSC-EEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECC-CCCEEEEccCCCC-cEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC-CCEEEEEeCCCceEe
Confidence 478999998 556999 888777 8999987765433322334578999999984 56999998 789999999987765
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.+....+..|.++++++ +|.||+++.. .+.|.+++............. +..|++|++|++ ++||+++...+.|.+
T Consensus 101 ~~~~~~~~~p~~i~~~~-~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~-g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDT-QGAVYVADRG--NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNS-GNVYVTDTDNNRVVK 175 (270)
T ss_dssp ECCCCSCSSEEEEEECT-TCCEEEEEGG--GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTT-CCEEEEEGGGTEEEE
T ss_pred eeecCCcCCCcceEECC-CCCEEEEECC--CCEEEEEECCCceeEeecccc-CCCceeEEEeCC-CCEEEEECCCCEEEE
Confidence 54434567899999998 7889999865 457888865443333222222 568999999996 679999998899999
Q ss_pred EecCCCceEEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 160 MTIRNRVRRKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 160 ~~~~g~~~~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++.++...... ...+..|.+|+++ ++.||+++..+++|.++++++..... ....+...|.+|++.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--LPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--CCCCSCSCEEEEEECTTC
T ss_pred EecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--eccCCCCCceeEEECCCC
Confidence 99998765443 2356889999997 56999999999999999998765543 222345689999998764
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.90 E-value=3.8e-21 Score=151.60 Aligned_cols=222 Identities=14% Similarity=0.222 Sum_probs=172.1
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-----CCCCCccEEEEeecCCeEEEEeCC-CCeEEEEeCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-----TNIRSPEGLTFDWVNRVLYWTDSQ-MDTISMANLN 74 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-----~~~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~ 74 (232)
.|.++++++ ++.||+++..++ +|.+++.++.....+.. ..+..|.+++++...+.||+++.. ++.|.+.+.+
T Consensus 31 ~p~~v~~~~-~g~l~v~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~ 108 (286)
T 1q7f_A 31 EPSGVAVNA-QNDIIVADTNNH-RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 108 (286)
T ss_dssp CEEEEEECT-TCCEEEEEGGGT-EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CCceEEECC-CCCEEEEECCCC-EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC
Confidence 378999998 567999998888 99999998765433322 124689999997558899999975 7899999988
Q ss_pred CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
|.....+.......|.++++++ +|.||+++.. .++|.+.+.++.....+.....+..|++|++|++ ++||+++...
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~ 184 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDN-KGRIIVVECK--VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRA 184 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECT-TSCEEEEETT--TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGGG
T ss_pred CcEEEEecCccCCCceEEEEeC-CCCEEEEECC--CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCEEEEECCC
Confidence 7655444334567899999998 6789999865 4679999988765554433223678999999997 7899999999
Q ss_pred CcEEEEecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCCC-cEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 155 KSLECMTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTN-RIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~-~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++|.+++.+|.....+.. .+..|.+|+++ +++||+++..++ +|.+++++|...+.+.... ....|.+|++.+++
T Consensus 185 ~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 185 HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV-KHAQCFDVALMDDG 262 (286)
T ss_dssp TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS-CCSCEEEEEEETTT
T ss_pred CEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC-CCCcceeEEECCCC
Confidence 999999998876665643 35789999997 789999999886 9999999887766665422 23468999988754
No 27
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=4.1e-21 Score=161.09 Aligned_cols=222 Identities=10% Similarity=0.107 Sum_probs=168.5
Q ss_pred eEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC---CCCCccEEEE-------eecCCeEEEEeCCCC----
Q psy5751 2 LIGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVITT---NIRSPEGLTF-------DWVNRVLYWTDSQMD---- 66 (232)
Q Consensus 2 ~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~---~~~~p~gl~~-------d~~~~~ly~~d~~~~---- 66 (232)
|.+|++|+ ..+.||+++...+ +|+++++++.....+... .+..|.+|++ |..++.||++|...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~-~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHK-AIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEE-EEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCC-eEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 78999998 4899999998877 899999998887776653 2457999999 987788999998862
Q ss_pred --eEEEEeCCC--CCCE----EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-------CCCc--------
Q psy5751 67 --TISMANLND--DQPK----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-------GTDR-------- 123 (232)
Q Consensus 67 --~I~~~~~~g--~~~~----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-------g~~~-------- 123 (232)
.|+.++.+. .... ..+. .+.+|.+++++|.++.||+++.. .++|++++++ +...
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~--~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYE--KGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETT--TTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECC--CCEEEEEecccccccccCceeeccccccc
Confidence 477775443 5431 2333 46799999999989999999987 5689999987 3332
Q ss_pred ----EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-----EEEec---------------CCCceE-
Q psy5751 124 ----EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-----RKVYS---------------NCTYPF- 178 (232)
Q Consensus 124 ----~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-----~~~~~---------------~~~~p~- 178 (232)
..+........|.+|+++++++.||++|..+++|+++++++... .+++. ++..|.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 23333322567999999999778999999999999999987531 33321 457899
Q ss_pred EEEEE--------CCEEEEEeCCCCcEEEEeCCCCCcceEEecc---------------------CCcceeEEEEEEcC
Q psy5751 179 GLSIT--------DEKYYWTDWKTNRIESANKEGERAPSIALDM---------------------MGTTYMYGIAAVPS 228 (232)
Q Consensus 179 gla~~--------~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~---------------------~~~~~p~gi~~~~~ 228 (232)
|++++ ++.||++|+.+++|++++++|. .+++.-.. .....|.||++.++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 88885 5799999999999999998884 33333210 02467999999875
No 28
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.89 E-value=1.9e-20 Score=150.98 Aligned_cols=224 Identities=17% Similarity=0.212 Sum_probs=164.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCC-----------------------CcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCe
Q psy5751 2 LIGITVDCVEGQVYYSSVADK-----------------------SSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRV 57 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~-----------------------~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ 57 (232)
|.++++++ ++.||+++..++ +.|++++.+......... ..+..|.+|++|+ .++
T Consensus 26 v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~g~ 103 (329)
T 3fvz_A 26 VSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-DGN 103 (329)
T ss_dssp EEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-TSC
T ss_pred ceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-CCC
Confidence 67999998 678999998773 158888887433323332 3467999999998 556
Q ss_pred EEEEeCCCCeEEEEeCCCCC--CEEEE--------eCCCCCceEEEEeCCCCeEEEEEc-CCCCCcEEEEeCCCCCcEEE
Q psy5751 58 LYWTDSQMDTISMANLNDDQ--PKVIV--------SKDLVNPRGIVVHPYYRKLFWSDW-NRSGPKIEWSNLDGTDREIF 126 (232)
Q Consensus 58 ly~~d~~~~~I~~~~~~g~~--~~~~~--------~~~~~~p~~iavd~~~~~ly~~d~-~~~~~~I~~~~~~g~~~~~~ 126 (232)
||++|..+++|.+++.+|.. ...+. ...+..|.++++++.++.||+++. . .++|.+.+.+|.....+
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~--~~~I~~~~~~g~~~~~~ 181 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC--NSRIVQFSPSGKFVTQW 181 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS--CCEEEEECTTSCEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC--CCeEEEEcCCCCEEEEe
Confidence 99999999999999999973 44443 245668999999987899999995 4 57899999888766655
Q ss_pred EEcC--------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecC-CCceEEEec--CCCceEEEEEE-------CCEEE
Q psy5751 127 LKAA--------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIR-NRVRRKVYS--NCTYPFGLSIT-------DEKYY 188 (232)
Q Consensus 127 ~~~~--------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~-g~~~~~~~~--~~~~p~gla~~-------~~~ly 188 (232)
.... .+..|.+|++|+++++||++|..+++|.+++.+ |.....+.. ....|.++++. ++.+|
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~ 261 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY 261 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE
Confidence 3221 245699999999889999999999999999998 665555532 33456655553 44455
Q ss_pred EEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 189 WTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 189 ~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+++....+|..++.. |+....+.........|.+|++.+++
T Consensus 262 v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 556666789999965 54444332222456789999997764
No 29
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.89 E-value=6.1e-21 Score=158.40 Aligned_cols=193 Identities=18% Similarity=0.171 Sum_probs=149.3
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE----eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI----TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~----~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
+++++..+.||+++.....+|++++..+......+ ......|.++++|+.++.||+++. +++|+++++++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEE
Confidence 78899889999999854327999998865543333 224578999999998899999876 6799999998776544
Q ss_pred EEe-----CCCCCce-EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-------------CCCCcceEEEe
Q psy5751 81 IVS-----KDLVNPR-GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-------------DLKLPNSLAVD 141 (232)
Q Consensus 81 ~~~-----~~~~~p~-~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-------------~~~~p~~l~~d 141 (232)
+.. .....|. +++++|.++.||+++.. .++|++++.++. ...+.... .+..|++|++|
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d 331 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVD 331 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETT--TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCC--CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe
Confidence 421 1223466 99999978999999976 678999999987 33333221 15679999999
Q ss_pred CCCCEEEEEEC-CCCcEEEEecCCCceEEEecC---------------CCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 142 FRTDELCWVDA-DSKSLECMTIRNRVRRKVYSN---------------CTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 142 ~~~~~Ly~~d~-~~~~i~~~~~~g~~~~~~~~~---------------~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
++ +.||++|. .+++|.++++..+....+... +..|.||+++ ++.||++|+.+++|.++..
T Consensus 332 ~d-G~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 332 ED-GNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TT-CCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CC-CCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 98 66999999 999999999554455555432 6789999997 5999999999999999875
No 30
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=5.1e-21 Score=159.74 Aligned_cols=200 Identities=15% Similarity=0.112 Sum_probs=152.5
Q ss_pred CeEEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCcee-EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVE-DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~-~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.|.++++++..+.||++|...+ ..+..+..+|.... ..+. .+..|.++++|+..+.|||+|..+++|+++++++.
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 3789999998888999998543 14666777765431 2222 46899999999988899999999999999999987
Q ss_pred CCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-----cEEEEEc-------------CCCCCcc-
Q psy5751 77 QPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-----REIFLKA-------------ADLKLPN- 136 (232)
Q Consensus 77 ~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-----~~~~~~~-------------~~~~~p~- 136 (232)
....+.. .....|++|+++|..++||+++.. .++|++++.++.. ...+... ..+..|.
T Consensus 259 ~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~ 336 (430)
T 3tc9_A 259 ETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN--QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQ 336 (430)
T ss_dssp EEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEE
T ss_pred cEEEEEEcCCCCcceeEEEcCCCCEEEEEECC--CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcc
Confidence 6534443 344679999999977779999976 6789999888752 2233321 1256788
Q ss_pred eEEEeC-------CCCEEEEEECCCCcEEEEecCCCceEEEec-----------------CCCceEEEEEE--CCEEEEE
Q psy5751 137 SLAVDF-------RTDELCWVDADSKSLECMTIRNRVRRKVYS-----------------NCTYPFGLSIT--DEKYYWT 190 (232)
Q Consensus 137 ~l~~d~-------~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-----------------~~~~p~gla~~--~~~ly~t 190 (232)
+++++. ..+.||++|..+++|.+++.+|.-...... ++..|.||+++ ++.||++
T Consensus 337 gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa 416 (430)
T 3tc9_A 337 GTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIG 416 (430)
T ss_dssp EEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred eEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEE
Confidence 899963 358999999999999999988743333321 25689999998 4899999
Q ss_pred eCCCCcEEEEeCC
Q psy5751 191 DWKTNRIESANKE 203 (232)
Q Consensus 191 d~~~~~i~~~~~~ 203 (232)
|..+++|.+++++
T Consensus 417 D~~n~rIr~i~~e 429 (430)
T 3tc9_A 417 DRENRRIRKIGYE 429 (430)
T ss_dssp EGGGTEEEEEEEC
T ss_pred ECCCCeEEEEccC
Confidence 9999999999865
No 31
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.89 E-value=3.9e-21 Score=154.50 Aligned_cols=218 Identities=12% Similarity=0.118 Sum_probs=162.9
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-------------------CCCccEEEEeecCCeEEEEe
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-------------------IRSPEGLTFDWVNRVLYWTD 62 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-------------------~~~p~gl~~d~~~~~ly~~d 62 (232)
|.++++|+ ++.++|++..++ +|++++.++...+.+.... ...|.||++|+..+.||++|
T Consensus 21 p~~i~~d~-~g~~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDS-TNKGFYTSVQDG-RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCEECCT-TCSSEEEECTTS-EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred ceEEEEcC-CCCEEEEEcCCC-eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 67899998 477777888878 9999998876554433211 24699999997568999999
Q ss_pred CCCCeEEEEeCCCCCCEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC---------------CCCcEEEEeCCCCCc
Q psy5751 63 SQMDTISMANLNDDQPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR---------------SGPKIEWSNLDGTDR 123 (232)
Q Consensus 63 ~~~~~I~~~~~~g~~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~---------------~~~~I~~~~~~g~~~ 123 (232)
.. +.|.+++.++...+.+.. ..+..|+++++++.+|.||+++... ..+.|++++.++...
T Consensus 99 ~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 77 458999988655555442 1346799999997468999999652 236799998876655
Q ss_pred EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC---ceEEEecCCCceEEEEEE-CCEEEEEeCC------
Q psy5751 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR---VRRKVYSNCTYPFGLSIT-DEKYYWTDWK------ 193 (232)
Q Consensus 124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~---~~~~~~~~~~~p~gla~~-~~~ly~td~~------ 193 (232)
..+... +..|+||+++++++.||++|...++|+++++++. ..+.+.. +..|.|++++ +|+||++++.
T Consensus 178 ~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 178 TLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSCEEEEEEEETTSST
T ss_pred EEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCCEEEEecCcccccc
Confidence 555544 7899999999997889999999999999999863 3444443 2239999997 6799999976
Q ss_pred ----CCcEEEEeCCCCCcceEEeccCC-cceeEEEEE
Q psy5751 194 ----TNRIESANKEGERAPSIALDMMG-TTYMYGIAA 225 (232)
Q Consensus 194 ----~~~i~~~~~~g~~~~~i~~~~~~-~~~p~gi~~ 225 (232)
.++|.+++++|+..+.+..+... ...|.+++.
T Consensus 255 ~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 255 HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE
T ss_pred cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE
Confidence 57899999998877777654322 456666654
No 32
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.88 E-value=1.9e-20 Score=156.38 Aligned_cols=197 Identities=15% Similarity=0.071 Sum_probs=147.6
Q ss_pred CeEEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.|.++++++..+ ||++|.... ..+..+...+... ...+. .+..|.++++|+..+.|||+|..+++|++++.++.
T Consensus 183 ~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 183 QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred CccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 378999999666 999997542 1356565554332 12333 46899999999988999999999999999999844
Q ss_pred CC-EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-----cEEEEEc-------------CCCCCcc
Q psy5751 77 QP-KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-----REIFLKA-------------ADLKLPN 136 (232)
Q Consensus 77 ~~-~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-----~~~~~~~-------------~~~~~p~ 136 (232)
.. ..+.. .....+.+|+++|..+.||+++.. .++|+++++++.. ...+... ..+..|.
T Consensus 261 ~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 338 (433)
T 4hw6_A 261 TLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG--KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN 338 (433)
T ss_dssp CEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred eEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence 33 44443 334456789999977789999976 6789999887532 2233322 1267899
Q ss_pred eEEE---------eCCCCEEEEEECCCCcEEEEecCCCceEEEec------------------CCCceEEEEEE--CCEE
Q psy5751 137 SLAV---------DFRTDELCWVDADSKSLECMTIRNRVRRKVYS------------------NCTYPFGLSIT--DEKY 187 (232)
Q Consensus 137 ~l~~---------d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------------------~~~~p~gla~~--~~~l 187 (232)
++++ |. .+.||++|..+++|.+++.+|. ..+++. ++.+|.||+++ ++.|
T Consensus 339 giav~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 416 (433)
T 4hw6_A 339 QGIFVKNEAYAGEED-EYDFYFCDRDSHTVRVLTPEGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCF 416 (433)
T ss_dssp EEEEEECGGGTTSSC-CEEEEEEETTTTEEEEECTTSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred cEEEEccccccccCC-CCcEEEEECCCCEEEEECCCCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEE
Confidence 9999 55 5899999999999999998873 333321 36779999998 7899
Q ss_pred EEEeCCCCcEEEEeCC
Q psy5751 188 YWTDWKTNRIESANKE 203 (232)
Q Consensus 188 y~td~~~~~i~~~~~~ 203 (232)
|++|+.+++|.++++.
T Consensus 417 yVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 417 YIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCEEEEEecC
Confidence 9999999999998764
No 33
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.87 E-value=1.2e-19 Score=144.22 Aligned_cols=212 Identities=15% Similarity=0.139 Sum_probs=160.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
++|..|++.++.|||+|...+ +|++++.++...... .. ...|.++++++.++ ||++. .+.|++++.++...+.+
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~-~i~~~d~~~~~~~~~-~~-~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAK-KVCRWDSFTKQVQRV-TM-DAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEE-EC-SSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCC-EEEEEECCCCcEEEE-eC-CCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcEEEE
Confidence 679999999999999999998 999999997665333 22 25799999998554 87776 36899999987655555
Q ss_pred EeC----CCCCceEEEEeCCCCeEEEEEcCC---------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEE
Q psy5751 82 VSK----DLVNPRGIVVHPYYRKLFWSDWNR---------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 82 ~~~----~~~~p~~iavd~~~~~ly~~d~~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly 148 (232)
... ....|+++++|+ +|.||+++... ..+.|++++.++.. ..+... +..|+|++++++++.||
T Consensus 89 ~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~--~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQ--VDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEE--ESBEEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeec--cccccceEEcCCCCEEE
Confidence 542 245689999998 77899987532 24579999887643 333333 67899999999988999
Q ss_pred EEECCCCcEEEEecC---CC--ceEEEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcc
Q psy5751 149 WVDADSKSLECMTIR---NR--VRRKVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTT 218 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~---g~--~~~~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~ 218 (232)
|++...++|++++++ |. .++.+.. ....|.|++++ +++||++.+..++|.+++++ |+....+..+. .
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~---~ 241 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV---D 241 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS---S
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC---C
Confidence 999999999999874 22 1233433 24679999997 78999999999999999998 77666666542 4
Q ss_pred eeEEEEEE
Q psy5751 219 YMYGIAAV 226 (232)
Q Consensus 219 ~p~gi~~~ 226 (232)
.|..+++.
T Consensus 242 ~~t~~~f~ 249 (297)
T 3g4e_A 242 KTTSCCFG 249 (297)
T ss_dssp BEEEEEEE
T ss_pred CceEEEEe
Confidence 57777765
No 34
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=2.6e-20 Score=150.19 Aligned_cols=201 Identities=12% Similarity=0.087 Sum_probs=150.9
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEE--------eCCCCCccEEEEeecCCeEEEEeC-CCCeEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVI--------TTNIRSPEGLTFDWVNRVLYWTDS-QMDTIS 69 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~--------~~~~~~p~gl~~d~~~~~ly~~d~-~~~~I~ 69 (232)
.|.++++++ ++.||++|..++ +|++++.+|.. ...+. ...+..|.+|++|+.++.||++|. .+++|.
T Consensus 92 ~p~gia~d~-~g~l~v~d~~~~-~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 92 LPHGLSIDT-DGNYWVTDVALH-QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp SEEEEEECT-TSCEEEEETTTT-EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CceEEEECC-CCCEEEEECCCC-EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 378999997 556999999988 99999999863 32332 234568999999987789999996 789999
Q ss_pred EEeCCCCCCEEEEe---------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CCCcEEEEEcCCCCCcceEE
Q psy5751 70 MANLNDDQPKVIVS---------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GTDREIFLKAADLKLPNSLA 139 (232)
Q Consensus 70 ~~~~~g~~~~~~~~---------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~p~~l~ 139 (232)
+++.+|.....+.. ..+..|.++++++.++.||+++.. .++|.+++.+ |.....+........|.+++
T Consensus 170 ~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 170 QFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 99998876655532 134569999999966999999986 6789999998 65444443222234566777
Q ss_pred EeC------CCCEEEEEECCCCcEEEEecCCCce-EEEe---cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 140 VDF------RTDELCWVDADSKSLECMTIRNRVR-RKVY---SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 140 ~d~------~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~---~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
+.+ . +.+|+++....+|..+++..++. ..+. ..+..|.+|+++ ++.||+++..+++|.+++.++..
T Consensus 248 ~~pg~~~~~~-g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 248 YIPGFLFAVN-GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EETTEEEEEE-CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred ecCCEEEEeC-CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 776 2 33444455566899999765544 3332 467889999997 67999999999999999988643
No 35
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.86 E-value=1.8e-19 Score=143.93 Aligned_cols=214 Identities=13% Similarity=0.061 Sum_probs=156.0
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQP 78 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~ 78 (232)
.|.++++++ ++.|||+|...+ +|++++.++... ..... ...|.+|+++.. ++||+++... .+|++++......
T Consensus 33 ~pegia~~~-~g~lyv~d~~~~-~I~~~d~~g~~~-~~~~~-~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAP-DGTIFVTNHEVG-EIVSITPDGNQQ-IHATV-EGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECT-TSCEEEEETTTT-EEEEECTTCCEE-EEEEC-SSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECC-CCCEEEEeCCCC-eEEEECCCCceE-EEEeC-CCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeE
Confidence 378999998 677999999888 999999998543 33332 358999999985 5599999664 3588887655444
Q ss_pred EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE---------cCCCCCcceEEEeCCCCEEE
Q psy5751 79 KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK---------AADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 79 ~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~---------~~~~~~p~~l~~d~~~~~Ly 148 (232)
..+.. .....+.++++.+ .+.+|+++.. .++|++++.++...++... ...+..|+|| ++++++||
T Consensus 108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~--~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLS-DTQYLTADSY--RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEEECTTCSCEEEEEESS-SSEEEEEETT--TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEEeCCCccccCcccccC-CCcEEEEECC--CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 44444 3455688998865 7889999964 5689999987543222211 0125689998 66678999
Q ss_pred EEECCCCcEEEEecCC-C---ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751 149 WVDADSKSLECMTIRN-R---VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGI 223 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~g-~---~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi 223 (232)
++|...++|+++++++ + ..+.+. .+..|.|++++ +|+||++++.+++|.+++++|+.......+ .....|.++
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~-~~~~~p~~~ 260 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAE-QGVIGSTAV 260 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGG-GTCTTEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeecc-cccCCceEE
Confidence 9999999999999985 2 233333 34689999997 789999999999999999987543321222 224678999
Q ss_pred EEE
Q psy5751 224 AAV 226 (232)
Q Consensus 224 ~~~ 226 (232)
++.
T Consensus 261 a~~ 263 (306)
T 2p4o_A 261 AFG 263 (306)
T ss_dssp EEC
T ss_pred EEe
Confidence 886
No 36
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=3e-19 Score=149.87 Aligned_cols=201 Identities=17% Similarity=0.160 Sum_probs=153.1
Q ss_pred eEEEEE-------eCCCCEEEEEEcCCC-----CcEEEEEcCC--Ccee----EEEeCCCCCccEEEEeecCCeEEEEeC
Q psy5751 2 LIGITV-------DCVEGQVYYSSVADK-----SSIKRAHLDG--KNVE----DVITTNIRSPEGLTFDWVNRVLYWTDS 63 (232)
Q Consensus 2 ~~~i~~-------d~~~~~ly~~d~~~~-----~~i~~~~~~g--~~~~----~~~~~~~~~p~gl~~d~~~~~ly~~d~ 63 (232)
|.+|+| +...++||++|...+ ..|+.+.... .... ..+. ...+|.++++|+.++.||+++.
T Consensus 188 p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 188 IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEET
T ss_pred CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEEC
Confidence 788999 998888999998863 1477775443 2211 2333 4579999999998999999999
Q ss_pred CCCeEEEEeCC-------CCCC------------EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 64 QMDTISMANLN-------DDQP------------KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 64 ~~~~I~~~~~~-------g~~~------------~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
.+++|++++++ +... +.+.. .....|.+|+++|..+.||++|.. .++|+++++++...
T Consensus 267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~--~h~I~kid~dg~~~ 344 (496)
T 3kya_A 267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN--NHYFMRSDYDEIKK 344 (496)
T ss_dssp TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTT
T ss_pred CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC--CCEEEEEecCCCcc
Confidence 99999999987 3322 23333 344578999999977779999976 68899998887653
Q ss_pred -----EEEEEc-------------CCCCCcc-eEEEeC------CCCEEEEEECCCCcEEEEecCCCceEEEec------
Q psy5751 124 -----EIFLKA-------------ADLKLPN-SLAVDF------RTDELCWVDADSKSLECMTIRNRVRRKVYS------ 172 (232)
Q Consensus 124 -----~~~~~~-------------~~~~~p~-~l~~d~------~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------ 172 (232)
.++... ..+..|. +++++. ..+.||++|..+++|.+++.+|. ..+++.
T Consensus 345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~ 423 (496)
T 3kya_A 345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTS 423 (496)
T ss_dssp EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHH
T ss_pred eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEeccccccc
Confidence 333332 1267899 888873 45899999999999999998873 444421
Q ss_pred ------------------CCCceEEEEEEC--CEEEEEeCCCCcEEEEeCCCCC
Q psy5751 173 ------------------NCTYPFGLSITD--EKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 173 ------------------~~~~p~gla~~~--~~ly~td~~~~~i~~~~~~g~~ 206 (232)
++..|.||+++. +.||++|..+++|+++++++..
T Consensus 424 ~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 424 LADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp HHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred ccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 357799999983 8999999999999999988644
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.86 E-value=4e-20 Score=144.26 Aligned_cols=196 Identities=15% Similarity=0.251 Sum_probs=153.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
|.++++++ ++.||+++. ++ +|++++.++.....+.......|.+|++|+ .++||+++...+.|++++.........
T Consensus 69 p~~i~~~~-~g~l~v~~~-~~-~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 69 PQGLAVDG-AGTVYVTDF-NN-RVVTLAAGSNNQTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CCCEEECT-TCCEEEEET-TT-EEEEECTTCSCCEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred cceeEECC-CCCEEEEcC-CC-EEEEEeCCCceEeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEee
Confidence 56889998 456999998 66 899999998765433334557899999998 567999998888999997554443333
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
....+..|.++++++ ++.||+++.. .+.|.+++.++.......... +..|.+|++|++ +.||+++...++|.+++
T Consensus 145 ~~~~~~~p~~i~~~~-~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDN-SGNVYVTDTD--NNRVVKLEAESNNQVVLPFTD-ITAPWGIAVDEA-GTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp CCCSCCSCCCEEECT-TCCEEEEEGG--GTEEEEECTTTCCEEECCCSS-CCSEEEEEECTT-CCEEEEETTTSCEEEEC
T ss_pred ccccCCCceeEEEeC-CCCEEEEECC--CCEEEEEecCCCceEeecccC-CCCceEEEECCC-CCEEEEECCCCcEEEEc
Confidence 334567899999998 6789999975 467999999887654433333 678999999997 59999999999999999
Q ss_pred cCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 162 IRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 162 ~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
.++....... ..+..|.+++++ ++.||+++..+++|..++...+.
T Consensus 220 ~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 220 AGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 9987655443 356789999997 67899999999999999987443
No 38
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.85 E-value=2.5e-18 Score=135.56 Aligned_cols=218 Identities=17% Similarity=0.225 Sum_probs=162.1
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.|.++.++. ++.||+++...+ .|.+++.++ ....+. ......|.+|++|. .+.||+++...+.|.+++.+|....
T Consensus 21 ~p~~i~~d~-~g~l~v~~~~~~-~v~~~~~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~g~~~~ 96 (300)
T 2qc5_A 21 GPYGITSSE-DGKVWFTQHKAN-KISSLDQSG-RIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKKGGFTE 96 (300)
T ss_dssp CEEEEEECT-TSCEEEEETTTT-EEEEECTTS-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEE
T ss_pred CcceeeECC-CCCEEEEcCCCC-eEEEECCCC-ceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCCCCeEE
Confidence 377899998 678999998777 899999884 333332 23357899999997 5679999988889999999855432
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
.........|.++++++ ++.||+++.. .+.|.+++.++.......... ...|.++++|+. ++||+++...+.|.+
T Consensus 97 ~~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~d~~-g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGL-NGDIWFTQLN--GDRIGKLTADGTIYEYDLPNK-GSYPAFITLGSD-NALWFTENQNNSIGR 171 (300)
T ss_dssp EECSSTTCCEEEEEECS-TTCEEEEETT--TTEEEEECTTSCEEEEECSST-TCCEEEEEECTT-SSEEEEETTTTEEEE
T ss_pred ecCCCCCCCCccceECC-CCCEEEEccC--CCeEEEECCCCCEEEccCCCC-CCCceeEEECCC-CCEEEEecCCCeEEE
Confidence 22223457899999997 7899999865 457999998844332222222 678999999997 669999998899999
Q ss_pred EecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 160 MTIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 160 ~~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++.++....... .....|.+++++ ++.||+++...+.|.++++.|.... +..+ .....|.+|++.+++
T Consensus 172 ~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 172 ITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISE-YDIP-TPNARPHAITAGKNS 241 (300)
T ss_dssp ECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEE-EECS-STTCCEEEEEECSTT
T ss_pred ECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEE-EECC-CCCCCceEEEECCCC
Confidence 999765443222 356789999997 7899999998899999999554322 3222 235679999987664
No 39
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.85 E-value=1.7e-18 Score=136.57 Aligned_cols=217 Identities=13% Similarity=0.200 Sum_probs=161.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|.+++++. ++.||+++...+ +|.+++.+|.. ...... ....|.++++|. .+.||+++...+.|++++.+|.....
T Consensus 64 ~~~i~~~~-~g~l~v~~~~~~-~v~~~d~~g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~ 139 (300)
T 2qc5_A 64 VMCLIVSS-LGDIWFTENGAN-KIGKLSKKGGF-TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEY 139 (300)
T ss_dssp EEEEEECT-TSCEEEEETTTT-EEEEECTTSCE-EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEE
T ss_pred ceeEEECC-CCCEEEEecCCC-eEEEECCCCCe-EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEc
Confidence 67899996 678999998777 89999988543 333322 347899999997 67899999888899999998544333
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
........|.++++++ ++.||+++.. .+.|++++.++.... +........|.++++|++ +.||+++...+.|.++
T Consensus 140 ~~~~~~~~~~~i~~d~-~g~l~v~~~~--~~~i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~ 214 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGS-DNALWFTENQ--NNSIGRITNTGKLEE-YPLPTNAAAPVGITSGND-GALWFVEIMGNKIGRI 214 (300)
T ss_dssp ECSSTTCCEEEEEECT-TSSEEEEETT--TTEEEEECTTCCEEE-EECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEE
T ss_pred cCCCCCCCceeEEECC-CCCEEEEecC--CCeEEEECCCCcEEE-eeCCCCCCCcceEEECCC-CCEEEEccCCCEEEEE
Confidence 3334567899999998 6779999965 467999988655433 222222678999999986 7999999988999999
Q ss_pred ecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 161 TIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 161 ~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+.+|....... .....|.+++++ ++.||+++..++.|.++++.|.. ..+..+ .....|.+|++.+++
T Consensus 215 ~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~-~~~~~~-~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 215 TTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTI-QEYQLQ-TENAEPHGITFGKDG 283 (300)
T ss_dssp CTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCE-EEEECC-STTCCCCCEEECTTS
T ss_pred cCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcE-EEEECC-ccCCccceeEeCCCC
Confidence 99665443323 356789999997 77899999988999999996532 333332 234578999887653
No 40
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=3.5e-18 Score=134.52 Aligned_cols=195 Identities=16% Similarity=0.165 Sum_probs=151.6
Q ss_pred eEEEEEeCCCCEEEEEEcC-CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVA-DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~-~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|.+++++..++.||+++.. +. .|.+++.+|.....+.......|.++++|+ .++||+++...+.|.+++.+|.....
T Consensus 79 p~~i~~~~~~g~l~v~~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~ 156 (286)
T 1q7f_A 79 PNRVAVVRNSGDIIVTERSPTH-QIQIYNQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHK 156 (286)
T ss_dssp EEEEEEETTTTEEEEEECGGGC-EEEEECTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred ceEEEEEcCCCeEEEEcCCCCC-EEEEECCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCEEEE
Confidence 6789997668999999965 56 899999877655444334457899999998 45799999988999999988865544
Q ss_pred EEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC-cEE
Q psy5751 81 IVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK-SLE 158 (232)
Q Consensus 81 ~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~ 158 (232)
+.. ..+..|.++++++ ++.||+++.. .++|.+.+.++.....+.....+..|.+|++|++ ++||+++...+ +|.
T Consensus 157 ~~~~~~~~~p~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVND-KQEIFISDNR--AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLT 232 (286)
T ss_dssp EECTTTCSSEEEEEECS-SSEEEEEEGG--GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEE
T ss_pred eCCCCccCCcEEEEECC-CCCEEEEECC--CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEE
Confidence 433 4567899999998 7889999975 4679999988765444332222578999999997 79999999886 999
Q ss_pred EEecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 159 CMTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 159 ~~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+++.+|.....+.. ....|.+++++ ++.||+++. +++|..++..
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 233 IFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK-DYRLYIYRYV 279 (286)
T ss_dssp EECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET-TTEEEEEECS
T ss_pred EECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC-CCeEEEEEcc
Confidence 99998876666644 34458999997 789999975 6788877654
No 41
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.83 E-value=6.7e-18 Score=133.69 Aligned_cols=211 Identities=14% Similarity=0.091 Sum_probs=157.6
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|.+++|++..+.|||++...+ +|++++.++. .+ .+......|.++++++ .+.||+++...+.|.+++........
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~-~i~~~~~~~~-~~-~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQN-RTWAWSDDGQ-LS-PEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGT-EEEEEETTSC-EE-EEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCC-EEEEEECCCC-eE-EEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 3789999998888999999888 9999999987 43 3344456899999998 56699999888899999984433333
Q ss_pred EEe----CCCCCceEEEEeCCCCeEEEEEcC---------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEe
Q psy5751 81 IVS----KDLVNPRGIVVHPYYRKLFWSDWN---------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVD 141 (232)
Q Consensus 81 ~~~----~~~~~p~~iavd~~~~~ly~~d~~---------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d 141 (232)
+.. .....|+++++++ +|.||+++.. ...+.|++++.++. ...+. .. +..|++++++
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~-~~-~~~~~gi~~s 180 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPI-RD-RVKPNGLAFL 180 (296)
T ss_dssp EECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEE-CC-CSSEEEEEEC
T ss_pred EeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEee-cC-CCCCccEEEC
Confidence 332 1245788999998 7899998741 11357999988843 33333 33 7889999999
Q ss_pred CCCCEEEEEECCCCcEEEEecC--CCc---eEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC
Q psy5751 142 FRTDELCWVDADSKSLECMTIR--NRV---RRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMM 215 (232)
Q Consensus 142 ~~~~~Ly~~d~~~~~i~~~~~~--g~~---~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~ 215 (232)
++++.| |++...++|++++++ |.. .+.+......|.+++++ +|+||++. .+.|.+++++|.....+..+..
T Consensus 181 ~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~ 257 (296)
T 3e5z_A 181 PSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT 257 (296)
T ss_dssp TTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC
T ss_pred CCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC
Confidence 997777 999999999999986 322 23342245678999997 78999999 6789999999877666654332
Q ss_pred CcceeEEEEEE
Q psy5751 216 GTTYMYGIAAV 226 (232)
Q Consensus 216 ~~~~p~gi~~~ 226 (232)
|..+++.
T Consensus 258 ----~~~~~f~ 264 (296)
T 3e5z_A 258 ----TSNLCFG 264 (296)
T ss_dssp ----CCEEEEE
T ss_pred ----ceeEEEE
Confidence 6666664
No 42
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.83 E-value=2e-18 Score=137.40 Aligned_cols=198 Identities=10% Similarity=0.184 Sum_probs=149.0
Q ss_pred EeCCCCEEEEEEcCC------------CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEe---CCCCeEEEE
Q psy5751 7 VDCVEGQVYYSSVAD------------KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD---SQMDTISMA 71 (232)
Q Consensus 7 ~d~~~~~ly~~d~~~------------~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d---~~~~~I~~~ 71 (232)
+...+++||+++... ...|++++++|+..+.+... . +.++...++.|||++ .....|+++
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-P----CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-C----EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-C----ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 345689999998654 22799999999986454432 1 224444589999999 567899999
Q ss_pred eCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751 72 NLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 72 ~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
+++|...+.+..... +++++..+.|||++.+ ..+|++++++|...+.+... +....++|.++.|||++
T Consensus 135 ~~dGs~~~~lt~~~~-----~~~~~~g~~iy~t~~g--~~~Iy~~~l~g~~~~~l~~~-----~~~~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 135 RIDGEEKKKIKNHYL-----FTCNTSDRYFYYNNPK--NGQLYRYDTASQSEALFYDC-----NCYKPVVLDDTNVYYMD 202 (302)
T ss_dssp ETTSCCCEEEESSCC-----CCSEEETTEEEEECTT--TCCEEEEETTTTEEEEEECS-----CEEEEEEEETTEEEEEE
T ss_pred ECCCCCeEEEeCCCc-----eEeeEECCEEEEEeCC--CceEEEEECCCCCEEEEeCC-----CccceeeecCCEEEEEE
Confidence 999999888887433 3456679999999873 57899999999988877543 33345778889999999
Q ss_pred CCC-CcEEEEecCCCceEEEecCCCceEEEEEECCEEEEE-eCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 152 ADS-KSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWT-DWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 152 ~~~-~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~t-d~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
... .+|++++++|+.++++.+. ..|. ++..+++|||+ +.....|++++.+|...+.+... ....|+++++
T Consensus 203 ~~~~~~I~~~~ldG~~~~~Lt~~-~~~~-~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~-----~~~~i~i~~d 274 (302)
T 3s25_A 203 VNRDNAIVHVNINNPNPVVLTEA-NIEH-YNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG-----EFCNINVTSQ 274 (302)
T ss_dssp GGGTTEEEEECSSSCCCEECSCS-CEEE-EEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES-----CEEEEEECSS
T ss_pred cCCCcEEEEEECCCCCeEEEeCC-Ccce-EEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC-----ccceEEEeCC
Confidence 764 5899999999988777542 2243 77889999998 56678999999999988877542 2346776654
No 43
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=1.3e-17 Score=131.45 Aligned_cols=214 Identities=14% Similarity=0.216 Sum_probs=158.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|.++++++ ++.+|+++...+ .|++++.++.. ..+.. .....|.++++|+ .+.||+++...+.|.+++.+|.....
T Consensus 59 ~~~i~~~~-~g~l~v~~~~~~-~i~~~~~~g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 59 VMCLTISS-DGEVWFTENAAN-KIGRITKKGII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp EEEEEECT-TSCEEEEETTTT-EEEEECTTSCE-EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred eeeEEECC-CCCEEEeCCCCC-eEEEECCCCcE-EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEe
Confidence 67899997 678999988777 89999988543 23322 2456899999997 57899999888899999996654433
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
........|.++++++ ++.||+++.. .+.|++++.++.......... ...|.++++|+. +.||+++...+.|.++
T Consensus 135 ~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~-g~l~v~~~~~~~i~~~ 209 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGS-DNALWFTENQ--NNAIGRITESGDITEFKIPTP-ASGPVGITKGND-DALWFVEIIGNKIGRI 209 (299)
T ss_dssp ECSSTTCCEEEEEECT-TSCEEEEETT--TTEEEEECTTCCEEEEECSST-TCCEEEEEECTT-SSEEEEETTTTEEEEE
T ss_pred cCCCCCCCCceEEEcC-CCCEEEEeCC--CCEEEEEcCCCcEEEeeCCCC-CCcceeEEECCC-CCEEEEccCCceEEEE
Confidence 3334567899999997 7899999864 467999988544332212222 678999999997 7799999888999999
Q ss_pred ecCCCceEEE-ec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 161 TIRNRVRRKV-YS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 161 ~~~g~~~~~~-~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+.++. ...+ .. ....|.+++++ ++.||+++..++.|.+++++|. ...+..+ .+...|.++++ ++
T Consensus 210 ~~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~-~~~~~~~~i~~-~~ 276 (299)
T 2z2n_A 210 TTSGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNI-IEEYPIQ-IKSAEPHGICF-DG 276 (299)
T ss_dssp CTTCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTE-EEEEECS-SSSCCEEEEEE-CS
T ss_pred CCCCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCc-eEEEeCC-CCCCccceEEe-cC
Confidence 99554 3333 22 45789999997 6799999988899999999653 3333332 23457899988 44
No 44
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=1.1e-17 Score=131.78 Aligned_cols=217 Identities=18% Similarity=0.257 Sum_probs=159.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|.++++++ ++.||+++...+ .|.+++.++ ...... ......|.+|++|+ .+.||+++...+.|.+++.++.....
T Consensus 17 ~~~i~~d~-~g~l~v~~~~~~-~v~~~d~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 17 PYGITVSD-KGKVWITQHKAN-MISCINLDG-KITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp EEEEEECT-TSCEEEEETTTT-EEEEECTTC-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred ccceEECC-CCCEEEEecCCC-cEEEEcCCC-CeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 67899997 678999998777 899999884 333333 22457899999997 56799999888899999988653222
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
........|.++++++ ++.||+++.. .+.|.+.+.++.......... ...|+++++|++ ++||+++...+.|.++
T Consensus 93 ~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~-~~~~~~i~~~~~-g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGP-NGDIWFTEMN--GNRIGRITDDGKIREYELPNK-GSYPSFITLGSD-NALWFTENQNNAIGRI 167 (299)
T ss_dssp ECSSTTCCEEEEEECT-TSCEEEEETT--TTEEEEECTTCCEEEEECSST-TCCEEEEEECTT-SCEEEEETTTTEEEEE
T ss_pred eCCCcCCCceeeEECC-CCCEEEEecC--CceEEEECCCCCEEEecCCCC-CCCCceEEEcCC-CCEEEEeCCCCEEEEE
Confidence 2223566899999997 7899999865 457999988554333222222 568999999986 7999999888999999
Q ss_pred ecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 161 TIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 161 ~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+.++....... .....|.+++++ ++.||+++...+.|.++++.+. ...+..+ .....|.+|++.+++
T Consensus 168 ~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~-~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 168 TESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGE-ITEFKIP-TPNARPHAITAGAGI 236 (299)
T ss_dssp CTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC-EEEEECS-STTCCEEEEEECSTT
T ss_pred cCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCc-EEEEECC-CCCCCceeEEECCCC
Confidence 99554333222 356779999997 6789999998899999999443 3333322 235679999987654
No 45
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.82 E-value=2.2e-18 Score=137.40 Aligned_cols=210 Identities=15% Similarity=0.152 Sum_probs=157.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.+..|++..+.|||+|..++ +|++++.+|. .+.+ ......|.++++|+ .++||+++...+.|.+++.+|.. ..+
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~-~i~~~~~~g~-~~~~-~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~g~~-~~~ 121 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGR-RVLGWREDGT-VDVL-LDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDADGQA-HLL 121 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTT-EEEEEETTSC-EEEE-EESCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE-EEE
T ss_pred ccCCeEeCCCCEEEEEECCCC-EEEEEeCCCC-EEEE-eCCCCccceeeECC-CCCEEEEECCCCEEEEECCCCCE-EEE
Confidence 678999998889999999988 9999998765 3233 33346899999998 45699999888899999998653 333
Q ss_pred Ee----CCCCCceEEEEeCCCCeEEEEEcC---------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751 82 VS----KDLVNPRGIVVHPYYRKLFWSDWN---------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 82 ~~----~~~~~p~~iavd~~~~~ly~~d~~---------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~ 142 (232)
.. ..+..|+++++++ +|.||++|.. .....|++++.++...+.+. . +..|+++++++
T Consensus 122 ~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~p~gl~~sp 197 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LDHPNGLAFSP 197 (305)
T ss_dssp ECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ESSEEEEEECT
T ss_pred EeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--CCCCcceEEcC
Confidence 32 1346789999998 7899998631 11357999998655555554 3 77899999999
Q ss_pred CCCEEEEEECCC-----CcEEEEecCCCc---eEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEe
Q psy5751 143 RTDELCWVDADS-----KSLECMTIRNRV---RRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIAL 212 (232)
Q Consensus 143 ~~~~Ly~~d~~~-----~~i~~~~~~g~~---~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~ 212 (232)
+++.||+++... ++|+++++++.. .+.+.. ....|.|++++ +++||++.. +.|.+++++|.....+..
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~--~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG--TGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS--SEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC--CcEEEECCCCCEEEEEEC
Confidence 988999999874 789999987642 233332 35678999997 788888873 459999999887776654
Q ss_pred ccCCcceeEEEEEE
Q psy5751 213 DMMGTTYMYGIAAV 226 (232)
Q Consensus 213 ~~~~~~~p~gi~~~ 226 (232)
+. .|..+++.
T Consensus 276 ~~----~~~~~~f~ 285 (305)
T 3dr2_A 276 PG----TASNCTFD 285 (305)
T ss_dssp SS----CCCEEEEC
T ss_pred CC----ceeEEEEe
Confidence 33 46666654
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.82 E-value=5.4e-18 Score=136.10 Aligned_cols=196 Identities=11% Similarity=0.107 Sum_probs=147.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe----CCCCCccEEEEeecCCeEEEEeCC-------------
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT----TNIRSPEGLTFDWVNRVLYWTDSQ------------- 64 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~----~~~~~p~gl~~d~~~~~ly~~d~~------------- 64 (232)
|.++++++.++.||++|.. . .|++++.++...+.+.. ..+..|.++++|+..++||++|..
T Consensus 82 p~gi~~~~~~g~l~v~d~~-~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVDCY-Y-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EEEEEEETTTTEEEEEETT-T-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CceEEEcCCCCcEEEEECC-C-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 7899999768999999976 3 58888888654433332 124579999999844689999965
Q ss_pred ----CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC---CcEEEEEcCCCCCcce
Q psy5751 65 ----MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT---DREIFLKAADLKLPNS 137 (232)
Q Consensus 65 ----~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~---~~~~~~~~~~~~~p~~ 137 (232)
.++|++++.++.....+.. .+..|++|++++.++.||+++.. .++|+++++++. ..+.+... .. |.+
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~~--~g-P~g 233 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTAEVLVKI--PN-PGN 233 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCEEEEEEC--SS-EEE
T ss_pred ccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCccceEEeC--CC-CCC
Confidence 2679999987655444443 56789999999966789999975 568999999863 33444432 23 999
Q ss_pred EEEeCCCCEEEEEECC----------CCcEEEEecCCCceEEEecC----CCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 138 LAVDFRTDELCWVDAD----------SKSLECMTIRNRVRRKVYSN----CTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~~----------~~~i~~~~~~g~~~~~~~~~----~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
|++|++ +.||+++.. .++|.+++.+|...+.+... +..|.+++..++.||+++..+++|.++++.
T Consensus 234 i~~d~~-G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 234 IKRNAD-GHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEECTT-SCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred eEECCC-CCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 999997 689999876 56899999998766666432 567888888899999999999999999987
Q ss_pred CCC
Q psy5751 204 GER 206 (232)
Q Consensus 204 g~~ 206 (232)
...
T Consensus 313 ~~~ 315 (322)
T 2fp8_A 313 KKG 315 (322)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 47
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=3e-17 Score=132.27 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=159.5
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-----CCccEEEEeecCCeEEEEeCC-CCeEEEEeCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-----RSPEGLTFDWVNRVLYWTDSQ-MDTISMANLN 74 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-----~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~ 74 (232)
.|.++++++ +++||+++...+ .|.++++........+..+. ..|.+|+++ ++.||+++.. .+.|.++|+.
T Consensus 85 ~p~~i~~~~-~g~lyv~~~~~~-~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 85 SPRYIHFLS-DEKAYVTQIWDY-RIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp SEEEEEEEE-TTEEEEEEBSCS-EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETT
T ss_pred CCcEEEEeC-CCeEEEEECCCC-eEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECC
Confidence 378899976 459999996667 89999998766544443321 279999994 7899999984 7899999988
Q ss_pred CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC--------CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751 75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS--------GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~--------~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
.......+. ....|.++++++ +|.+|++..+.. .+.|++++.........+.......|++|++++++++
T Consensus 161 t~~~~~~i~-~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 161 TDKVVDELT-IGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp TTEEEEEEE-CSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CCeEEEEEE-cCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 655443444 345799999998 788999886520 2679999987554332222211347999999999999
Q ss_pred EEEEECCCCcEEEEecCCCceE--EEec-CCCceEEEEEE--CCEEEEEe----CCCCcEEEEeCCCCCcceEEeccCCc
Q psy5751 147 LCWVDADSKSLECMTIRNRVRR--KVYS-NCTYPFGLSIT--DEKYYWTD----WKTNRIESANKEGERAPSIALDMMGT 217 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~g~~~~--~~~~-~~~~p~gla~~--~~~ly~td----~~~~~i~~~~~~g~~~~~i~~~~~~~ 217 (232)
||+++. .|+++++++.+.. .+.. ....|.|++++ +++||+++ +.+++|.+++++|+..+.+.. -
T Consensus 239 lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~----G 311 (328)
T 3dsm_A 239 LYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYV----G 311 (328)
T ss_dssp EEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEE----E
T ss_pred EEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEe----c
Confidence 999976 8999999865532 1122 25789999995 78999999 788999999999887777754 3
Q ss_pred ceeEEEEEEcC
Q psy5751 218 TYMYGIAAVPS 228 (232)
Q Consensus 218 ~~p~gi~~~~~ 228 (232)
..|.+++.-+.
T Consensus 312 ~~P~~~~~~~~ 322 (328)
T 3dsm_A 312 IIPGAFCWKLE 322 (328)
T ss_dssp ESEEEEEEECC
T ss_pred cCcceEEEecc
Confidence 36888887653
No 48
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=2e-17 Score=134.60 Aligned_cols=220 Identities=14% Similarity=0.142 Sum_probs=154.7
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-----eCCCCCccEEEEeec---CCeEEEEeCCC-----Ce
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-----TTNIRSPEGLTFDWV---NRVLYWTDSQM-----DT 67 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-----~~~~~~p~gl~~d~~---~~~ly~~d~~~-----~~ 67 (232)
.|.++++++ +++||+++.. + +|++++ +|.. +.+. ......|.||++++. ++.||+++... ++
T Consensus 32 ~P~~ia~~p-dG~l~V~e~~-g-~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLP-DGGMLIAERP-G-RIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECT-TSCEEEEETT-T-EEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcC-CCeEEEEeCC-C-eEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 488999998 5679999976 5 899998 6542 2222 224578999999986 68999998754 68
Q ss_pred EEEEeCCCCC---CEEEEe------CCCCCceEEEEeCCCCeEEEEEcCC-----------CCCcEEEEeCCC-------
Q psy5751 68 ISMANLNDDQ---PKVIVS------KDLVNPRGIVVHPYYRKLFWSDWNR-----------SGPKIEWSNLDG------- 120 (232)
Q Consensus 68 I~~~~~~g~~---~~~~~~------~~~~~p~~iavd~~~~~ly~~d~~~-----------~~~~I~~~~~~g------- 120 (232)
|.+++.++.. .+.++. .....|.+|+++| +|.||++.... ..++|.|++.+|
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 9999988642 233433 1245789999998 78999997432 136899999998
Q ss_pred ------CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc--------EEEEecCCC----------------ceEEE
Q psy5751 121 ------TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS--------LECMTIRNR----------------VRRKV 170 (232)
Q Consensus 121 ------~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~--------i~~~~~~g~----------------~~~~~ 170 (232)
...+++... +.+|.|+++|+.++.||++|...+. |.++...+. .....
T Consensus 186 f~~~~~~~~~i~a~G--~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 186 FLGRRGARPEVYSLG--HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTTCTTSCTTEEEEC--CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred ccCCCCCCccEEEEc--CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 334455444 7889999999977999999987665 555543220 01111
Q ss_pred ecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCc-----ceEEeccCCcceeEEEEEEcCC
Q psy5751 171 YSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERA-----PSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 171 ~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~-----~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
......|.|+++.++.+|++++..++|.++..++... ....+ ......|.+|++.+++
T Consensus 264 ~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~-~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 264 WPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETA-LSGFGRLREVQVGPDG 326 (352)
T ss_dssp CTTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEE-EESSCCEEEEEECTTS
T ss_pred cCCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchhee-cccCCCeeEEEECCCC
Confidence 1234568999999999999999999999999874321 11111 1234679999998765
No 49
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=9e-17 Score=129.03 Aligned_cols=221 Identities=15% Similarity=0.186 Sum_probs=163.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC----CeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM----DTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~g~~ 77 (232)
|.+++|++ ++.|||++...+ .|++++.++.....+.......|.++++++ .+.||++.... +.|++++.++..
T Consensus 47 ~~~~~~~~-~g~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 47 LEGLNFDR-QGQLFLLDVFEG-NIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp EEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred ccCcEECC-CCCEEEEECCCC-EEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 57889997 667999998888 999999987665555433446899999998 45788888765 689999999887
Q ss_pred CEEEEe--CCCCCceEEEEeCCCCeEEEEEcCC----CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751 78 PKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNR----SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 78 ~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~----~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
...+.. .....|.++++++ +|.+|+++... ....|++++.++.....+... ...|++++++++++.||+++
T Consensus 124 ~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 124 LQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp CEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEE
T ss_pred EEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEe
Confidence 764443 2345789999998 78899988631 135799998887665555443 56799999999977899999
Q ss_pred CCCCcEEEEecC--CCceEE-----Eec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC---Ccc
Q psy5751 152 ADSKSLECMTIR--NRVRRK-----VYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMM---GTT 218 (232)
Q Consensus 152 ~~~~~i~~~~~~--g~~~~~-----~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~---~~~ 218 (232)
...+.|++++++ |..... ... ....|.+++++ ++++|+++..++.|.+++++|.....+..+.. ...
T Consensus 201 ~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~ 280 (333)
T 2dg1_A 201 TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHML 280 (333)
T ss_dssp GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSC
T ss_pred CCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCcccccc
Confidence 888899999984 433221 111 22479999997 78899999888899999998766555543321 012
Q ss_pred eeEEEEEEcC
Q psy5751 219 YMYGIAAVPS 228 (232)
Q Consensus 219 ~p~gi~~~~~ 228 (232)
.|.++++.++
T Consensus 281 ~~~~~~~~~d 290 (333)
T 2dg1_A 281 RSTHPQFIPG 290 (333)
T ss_dssp BCCEEEECTT
T ss_pred CcceEEECCC
Confidence 5778877544
No 50
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.78 E-value=3.5e-16 Score=127.32 Aligned_cols=220 Identities=11% Similarity=0.034 Sum_probs=156.3
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-----eCCCCCccEEEEeec---CCeEEEEeCC---C----
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-----TTNIRSPEGLTFDWV---NRVLYWTDSQ---M---- 65 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-----~~~~~~p~gl~~d~~---~~~ly~~d~~---~---- 65 (232)
.|.++++++ +++||+++.. + +|++++.+|. +.+. ......|.||++++. ++.||+++.. .
T Consensus 30 ~P~~ia~~p-dG~l~V~e~~-g-~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 30 VPWSIAPLG-GGRYLVTERP-G-RLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CEEEEEEEE-TTEEEEEETT-T-EEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCeEEEEcC-CCeEEEEeCC-C-EEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 488999998 7789999987 5 8999976664 3332 224568999999986 7899999863 3
Q ss_pred CeEEEEeCCCCC-----CEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC-----------CCCcEEEEeCCCC----
Q psy5751 66 DTISMANLNDDQ-----PKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR-----------SGPKIEWSNLDGT---- 121 (232)
Q Consensus 66 ~~I~~~~~~g~~-----~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~-----------~~~~I~~~~~~g~---- 121 (232)
++|.+++.++.. .++++. .....+.+|+++| +|.||++.... ..++|.|++.+|.
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 689999988751 333332 2345689999998 78999996431 1368999999987
Q ss_pred ----CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc---EEEEecCCCc-----------------eEEEe-cCCCc
Q psy5751 122 ----DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS---LECMTIRNRV-----------------RRKVY-SNCTY 176 (232)
Q Consensus 122 ----~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~---i~~~~~~g~~-----------------~~~~~-~~~~~ 176 (232)
..++.... +.+|.||++|+.++.||++|...+. |..+.. |.+ ..... .....
T Consensus 184 npf~~~~i~a~G--~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 184 NPFPNSPIWSYG--HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp SSSTTCCEEEEC--CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCcEEEEc--cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 44555554 8899999999977999999988654 555543 221 11111 23456
Q ss_pred eEEEEE--------ECCEEEEEeCCCCcEEEEeCCCC-Ccc-eEEeccCCcceeEEEEEEcCC
Q psy5751 177 PFGLSI--------TDEKYYWTDWKTNRIESANKEGE-RAP-SIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 177 p~gla~--------~~~~ly~td~~~~~i~~~~~~g~-~~~-~i~~~~~~~~~p~gi~~~~~~ 229 (232)
|.|+++ .++.||++++..++|.++..++. ... .-.+.......|.+|++.+++
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG 323 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence 899999 57899999999999999998842 221 111211124579999988765
No 51
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.77 E-value=1e-15 Score=123.09 Aligned_cols=211 Identities=11% Similarity=0.092 Sum_probs=154.9
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+++..|++.++.|||+|...+ .|++++.++.....+.. ...+.++++++ .+.+|++.. ..|++++.++.....+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~-~i~~~d~~~~~~~~~~~--~~~v~~i~~~~-dg~l~v~~~--~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILER-ELHELHLASGRKTVHAL--PFMGSALAKIS-DSKQLIASD--DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGT-EEEEEETTTTEEEEEEC--SSCEEEEEEEE-TTEEEEEET--TEEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCC-EEEEEECCCCcEEEEEC--CCcceEEEEeC-CCeEEEEEC--CCEEEEECCCCcEEEE
Confidence 578999998899999999888 99999998766533322 25789999998 466777763 4699999876665545
Q ss_pred EeC----CCCCceEEEEeCCCCeEEEEEcCC----CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 82 VSK----DLVNPRGIVVHPYYRKLFWSDWNR----SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 82 ~~~----~~~~p~~iavd~~~~~ly~~d~~~----~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
... ....++++++|+ +|.+|+++... ..+.|++++ ++. ...+... ...|++++++++++.||+++..
T Consensus 125 ~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~-~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGK-VTKLFAD--ISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTE-EEEEEEE--ESSEEEEEECTTSCEEEEEETT
T ss_pred eeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCc-EEEeeCC--CcccCCeEEcCCCCEEEEEECC
Confidence 431 124678999998 67888887531 235789888 543 3333332 5679999999998899999998
Q ss_pred CCcEEEEecC--CC-c---eEEEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751 154 SKSLECMTIR--NR-V---RRKVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGI 223 (232)
Q Consensus 154 ~~~i~~~~~~--g~-~---~~~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi 223 (232)
.+.|++++++ ++ . ++.+.. ....|.+++++ ++.||++.+..+.|.+++++|+..+.+..+. ..|.++
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~---~~~~~~ 276 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPG---KQTTCP 276 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSC---SBEEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCC---CCcEEE
Confidence 8999999986 32 2 233322 34679999997 7899999988889999999877666565432 357777
Q ss_pred EEE
Q psy5751 224 AAV 226 (232)
Q Consensus 224 ~~~ 226 (232)
++.
T Consensus 277 af~ 279 (326)
T 2ghs_A 277 AFI 279 (326)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 52
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=8.2e-17 Score=130.42 Aligned_cols=223 Identities=13% Similarity=0.077 Sum_probs=151.7
Q ss_pred CeEEEEEeCCCCEEEEEEcC--CC-CcEEEEEcCCCceeEE------EeCCCCCccEEEEeecCCeEEEEeCC-----CC
Q psy5751 1 MLIGITVDCVEGQVYYSSVA--DK-SSIKRAHLDGKNVEDV------ITTNIRSPEGLTFDWVNRVLYWTDSQ-----MD 66 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~--~~-~~i~~~~~~g~~~~~~------~~~~~~~p~gl~~d~~~~~ly~~d~~-----~~ 66 (232)
.|.++++++ ++++|++... .+ .+|..++ +|. .... ....+..|.++++|+. ++|||+|.. ..
T Consensus 18 ~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 18 APGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDG-LIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVP 93 (343)
T ss_dssp CEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTE-EEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCC
T ss_pred CcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCC-eecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCC
Confidence 478999997 6789998532 11 2688887 542 1100 1124679999999984 789999976 47
Q ss_pred eEEEEeCCCCC-CEEEEe-C----CCCCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEc--C-------
Q psy5751 67 TISMANLNDDQ-PKVIVS-K----DLVNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKA--A------- 130 (232)
Q Consensus 67 ~I~~~~~~g~~-~~~~~~-~----~~~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~--~------- 130 (232)
+|.+++++... .+.+.- . ....|+++++++.++.+|+++... ..+.|.+++++......++.. .
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 89999987544 333221 1 124679999998789999999721 145688888764433222211 0
Q ss_pred ------C-------------CCCcceEEEeCCCCEEEEEECCCCcEEEEecC----CC--ceE-----EEecCCCceEEE
Q psy5751 131 ------D-------------LKLPNSLAVDFRTDELCWVDADSKSLECMTIR----NR--VRR-----KVYSNCTYPFGL 180 (232)
Q Consensus 131 ------~-------------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~----g~--~~~-----~~~~~~~~p~gl 180 (232)
. ...|+||+++++++.||+++....++++++.+ +. ..+ ........|.|+
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 0 13589999999988999999988899999864 11 110 111234579999
Q ss_pred EEE-CCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 181 SIT-DEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 181 a~~-~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+++ +++||++++..++|.++++ +|.....+.. .....|.+|++.+++
T Consensus 254 a~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~--~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD--EKLSWTDSFNFGSDG 302 (343)
T ss_dssp EECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC--GGGSCEEEEEECTTS
T ss_pred EECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC--CceecCCeeEECCCC
Confidence 997 7899999999999999999 6653332222 235689999997653
No 53
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=2.9e-15 Score=120.63 Aligned_cols=212 Identities=16% Similarity=0.150 Sum_probs=154.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
|.++.++ +++||+++...+ .|.+++.........+. ....|.+|++++. +.||+++...+.|.++|+........
T Consensus 46 ~~~i~~~--~~~lyv~~~~~~-~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 46 AQSMVIR--DGIGWIVVNNSH-VIFAIDINTFKEVGRIT-GFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp EEEEEEE--TTEEEEEEGGGT-EEEEEETTTCCEEEEEE-CCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ceEEEEE--CCEEEEEEcCCC-EEEEEECcccEEEEEcC-CCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEE
Confidence 5677775 589999998878 99999998655433333 4579999999774 58999996678999999887654433
Q ss_pred EeC-C----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--
Q psy5751 82 VSK-D----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-- 154 (232)
Q Consensus 82 ~~~-~----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-- 154 (232)
+.. . ...|.+|+++ +++||+++++. ...|.++++........+.. ...|++++++++ +++|++....
T Consensus 121 i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~-~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~d-G~l~v~~~~~~~ 194 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQY--GKYVYVNCWSY-QNRILKIDTETDKVVDELTI--GIQPTSLVMDKY-NKMWTITDGGYE 194 (328)
T ss_dssp EECTTCCTTTCBCCCEEEE--TTEEEEEECTT-CCEEEEEETTTTEEEEEEEC--SSCBCCCEECTT-SEEEEEBCCBCT
T ss_pred EEcCCccccCCCcceEEEE--CCEEEEEcCCC-CCEEEEEECCCCeEEEEEEc--CCCccceEEcCC-CCEEEEECCCcc
Confidence 431 1 1279999995 89999999742 45799999876544333333 457999999997 7899998765
Q ss_pred --------CcEEEEecCCCceE-EE-ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEE
Q psy5751 155 --------KSLECMTIRNRVRR-KV-YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYG 222 (232)
Q Consensus 155 --------~~i~~~~~~g~~~~-~~-~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~g 222 (232)
+.|.+++.++.+.. .+ ......|.++++. +++||+++. .|++++..+...........+...|+|
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~g 271 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYG 271 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEE
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEE
Confidence 78999999866543 23 2224589999996 789999986 899999875443211111112468999
Q ss_pred EEEEc
Q psy5751 223 IAAVP 227 (232)
Q Consensus 223 i~~~~ 227 (232)
|++.+
T Consensus 272 i~vdp 276 (328)
T 3dsm_A 272 LTVNP 276 (328)
T ss_dssp EEECT
T ss_pred EEEcC
Confidence 99976
No 54
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.75 E-value=7.8e-16 Score=122.27 Aligned_cols=216 Identities=16% Similarity=0.148 Sum_probs=154.7
Q ss_pred eEEEEEeCCCCEEEEE-------EcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEE
Q psy5751 2 LIGITVDCVEGQVYYS-------SVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISM 70 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~-------d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~ 70 (232)
|.+++|+. ++.||++ +...+ .|++++.+......+... ....|.++++|+.++.||+++... .|.+
T Consensus 20 ~~~~~~~~-~g~l~~~~~~~~~~~~~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l~~ 96 (314)
T 1pjx_A 20 AEGPVFDK-NGDFYIVAPEVEVNGKPAG-EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-GLLV 96 (314)
T ss_dssp CEEEEECT-TSCEEEEETTCEETTEECC-EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-EEEE
T ss_pred ccCceECC-CCCEEEEEeccccCCCCCC-EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-CEEE
Confidence 67999995 7789999 76667 899999765554333321 225789999998548899998754 7999
Q ss_pred EeCCCCCCEEE-Ee----CCCCCceEEEEeCCCCeEEEEEcCCC-------------CCcEEEEeCCCCCcEEEEEcCCC
Q psy5751 71 ANLNDDQPKVI-VS----KDLVNPRGIVVHPYYRKLFWSDWNRS-------------GPKIEWSNLDGTDREIFLKAADL 132 (232)
Q Consensus 71 ~~~~g~~~~~~-~~----~~~~~p~~iavd~~~~~ly~~d~~~~-------------~~~I~~~~~~g~~~~~~~~~~~~ 132 (232)
++.+|. ...+ .. .....|.++++++ +|.||+++.... .+.|++++.++. ...+... .
T Consensus 97 ~d~~g~-~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~--~ 171 (314)
T 1pjx_A 97 VQTDGT-FEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDTA--F 171 (314)
T ss_dssp EETTSC-EEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEEE--E
T ss_pred EeCCCC-EEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCC-EEEeccC--C
Confidence 998843 3333 22 1234689999998 789999986421 257899988743 3333333 5
Q ss_pred CCcceEEEe----CCCCEEEEEECCCCcEEEEecCC-Cc---eEEEec---CC-CceEEEEEE-CCEEEEEeCCCCcEEE
Q psy5751 133 KLPNSLAVD----FRTDELCWVDADSKSLECMTIRN-RV---RRKVYS---NC-TYPFGLSIT-DEKYYWTDWKTNRIES 199 (232)
Q Consensus 133 ~~p~~l~~d----~~~~~Ly~~d~~~~~i~~~~~~g-~~---~~~~~~---~~-~~p~gla~~-~~~ly~td~~~~~i~~ 199 (232)
..|++++++ ++++.||+++...++|+++++++ +. .+.+.. .. ..|.+++++ ++.||+++..++.|.+
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 679999999 88668999999899999998762 22 122222 12 679999997 6899999988899999
Q ss_pred EeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751 200 ANKE-GERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 200 ~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
++++ |.....+..+ ...|.++++.++
T Consensus 252 ~d~~~g~~~~~~~~~---~~~~~~i~~~~d 278 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCP---FEKPSNLHFKPQ 278 (314)
T ss_dssp ECTTCBSCSEEEECS---SSCEEEEEECTT
T ss_pred EcCCCCcEeEEEeCC---CCCceeEEECCC
Confidence 9998 6655555432 357888888544
No 55
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=8.3e-16 Score=124.49 Aligned_cols=192 Identities=13% Similarity=0.165 Sum_probs=139.2
Q ss_pred CeEEEEEeCCCCEEEEEEcC-----CCCcEEEEEcCCCceeEEEe-C-----CCCCccEEEEeecCCeEEEEeC---CCC
Q psy5751 1 MLIGITVDCVEGQVYYSSVA-----DKSSIKRAHLDGKNVEDVIT-T-----NIRSPEGLTFDWVNRVLYWTDS---QMD 66 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~-----~~~~i~~~~~~g~~~~~~~~-~-----~~~~p~gl~~d~~~~~ly~~d~---~~~ 66 (232)
.|.++++|+ +++|||+|.. .. +|.+++++.......+. . ....+.++++|+.++.+|++|. ..+
T Consensus 68 ~p~gv~~d~-~g~L~v~D~g~~~~~~~-~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 68 TVLGIKSDG-NGIVWMLDNGNQSKSVP-KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CEEEEEECS-SSEEEEEECHHHHTSCC-EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred EeeEEEEcC-CCcEEEEcCCCCcCCCC-eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 378999998 5899999976 46 89999998555323322 1 1246799999987789999998 778
Q ss_pred eEEEEeCCCCCCEEEEeC-----------------------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751 67 TISMANLNDDQPKVIVSK-----------------------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~~-----------------------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~ 117 (232)
.|.+++++......+... ....|++|++++.++.||+++.. ..++++++
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~--~~~l~~~~ 223 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH--STSMYRIK 223 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS--CSEEEEEE
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC--CCeEEEEE
Confidence 999999874432222211 01357999999977799999976 35788887
Q ss_pred CC----CC--------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec-CCCceEEEec--CCCceEEEEE
Q psy5751 118 LD----GT--------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI-RNRVRRKVYS--NCTYPFGLSI 182 (232)
Q Consensus 118 ~~----g~--------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~-~g~~~~~~~~--~~~~p~gla~ 182 (232)
.+ +. ..... .. ...|.|+++|++ +.||+++...++|.+++. +|. ...+.. .+..|.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~-g~--~g~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERY-SE--KPICDGISIDKD-HNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEE-EE--CCSCSCEEECTT-CCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEE
T ss_pred HHHhcCCCCChhhhhcceEec-cc--CCCCceEEECCC-CCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEE
Confidence 42 11 01111 12 348999999997 899999999999999999 664 444443 4788999999
Q ss_pred E-CCEEEEEeCCCCcEEEEe
Q psy5751 183 T-DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 183 ~-~~~ly~td~~~~~i~~~~ 201 (232)
. ++.||+++...+++..++
T Consensus 299 ~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 299 GSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp CTTSCEEEEECCGGGSGGGB
T ss_pred CCCCcEEEEeCccccccccc
Confidence 6 789999998776654444
No 56
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.73 E-value=3.8e-14 Score=109.52 Aligned_cols=199 Identities=13% Similarity=0.164 Sum_probs=146.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~ 80 (232)
+.|+++++.+++||.+...+. +|++++++|.-.+.+-..+...++||+++. ++.+++++...+++++++++.... ..
T Consensus 29 lSGla~~~~~~~L~aV~d~~~-~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPA-AIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTE-EEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred cceeEEeCCCCEEEEEECCCC-eEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 579999998999998776677 999999997655555445668999999996 567888988889999887765543 11
Q ss_pred --EEeCCC-CCc-----eEEEEeCCCCeEEEEEcCCCCCcEEEEe--CCCCCcEEEEE-----cCCCCCcceEEEeCCCC
Q psy5751 81 --IVSKDL-VNP-----RGIVVHPYYRKLFWSDWNRSGPKIEWSN--LDGTDREIFLK-----AADLKLPNSLAVDFRTD 145 (232)
Q Consensus 81 --~~~~~~-~~p-----~~iavd~~~~~ly~~d~~~~~~~I~~~~--~~g~~~~~~~~-----~~~~~~p~~l~~d~~~~ 145 (232)
.....+ ..| .|||+|+.+++||.+.-.. ...|+..+ +.+...+++-. ...+..+++|++|+.++
T Consensus 107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 111121 234 7999999888999987542 33678776 22233344321 11256789999999999
Q ss_pred EEEEEECCCCcEEEEecCCCceEEE-ec--------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 146 ELCWVDADSKSLECMTIRNRVRRKV-YS--------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 146 ~Ly~~d~~~~~i~~~~~~g~~~~~~-~~--------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
+||+.......+..++.+|.-+..+ +. ..+.|.|||++ +|+||++.-. +.+++|.+++
T Consensus 186 ~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~~ 253 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQS 253 (255)
T ss_dssp EEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC--
T ss_pred eEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEecC
Confidence 9999999999999999998743333 22 24689999997 7899999665 6899998874
No 57
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.73 E-value=5.9e-15 Score=117.12 Aligned_cols=218 Identities=11% Similarity=0.058 Sum_probs=154.8
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-------CCccEEEE---eecCCeEEE-EeC------
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-------RSPEGLTF---DWVNRVLYW-TDS------ 63 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-------~~p~gl~~---d~~~~~ly~-~d~------ 63 (232)
.|+++.||..++++|++++... +|.+++.++....++..+.+ ..+.||.+ |+. ++|++ ++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g-~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKG-RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTT-EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCC-EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccc
Confidence 3788999999999999999998 99999998665545533332 25789999 675 77887 552
Q ss_pred ------CCCeEEEEeCC----CCCCEEEE-e----C-------CCCCceEEEEeCCCCeEEEEEcCCCC-CcEEEEeCCC
Q psy5751 64 ------QMDTISMANLN----DDQPKVIV-S----K-------DLVNPRGIVVHPYYRKLFWSDWNRSG-PKIEWSNLDG 120 (232)
Q Consensus 64 ------~~~~I~~~~~~----g~~~~~~~-~----~-------~~~~p~~iavd~~~~~ly~~d~~~~~-~~I~~~~~~g 120 (232)
....+.++|++ +.....+- . . ....+++|++|+ .|..|+++.. . +.|++++.+|
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~--~~~~I~rV~pdG 168 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFAL--GMPAIARVSADG 168 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEE--SSCEEEEECTTS
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCC--CCCeEEEEeCCC
Confidence 24679999998 43332221 1 1 223589999997 8999999875 4 7799999999
Q ss_pred CCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE-ec------CCCceEEE-EE-ECCEE
Q psy5751 121 TDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV-YS------NCTYPFGL-SI-TDEKY 187 (232)
Q Consensus 121 ~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-~~------~~~~p~gl-a~-~~~~l 187 (232)
.......... ....++||++++++..|++.+. .+++.+++++...+..+ .+ .+..|.+| +. .+|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 9666554321 1345889999999889999988 99999999984322112 22 46778996 55 46766
Q ss_pred -EEEeCCCCcEEEEeCCCCCcceEEeccCCcce--eEEEEEE
Q psy5751 188 -YWTDWKTNRIESANKEGERAPSIALDMMGTTY--MYGIAAV 226 (232)
Q Consensus 188 -y~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~--p~gi~~~ 226 (232)
++++..++.+...+.++ ++........++. +.|+++.
T Consensus 248 llV~~~~~~~~~l~S~Dg--W~sa~~~g~~~~~~~~~g~tt~ 287 (334)
T 2p9w_A 248 VLVGARAPYAISFRSWDN--WKSANIKKTKRSELQNSGFTAV 287 (334)
T ss_dssp EEEEEETTEEEEEECSST--TSEEEEEEEECGGGGSSCEEEE
T ss_pred EEEEcCCCCEEEEECCCC--cceeEEeeeecCccccCceeEE
Confidence 99998778777778887 5544443322322 5666665
No 58
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.72 E-value=3.3e-15 Score=119.14 Aligned_cols=180 Identities=11% Similarity=0.038 Sum_probs=132.2
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
..|+++++|+ .++|||+|..+++|++++.+|... .... ....|.++++++ +|.||+++......+|++++......
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~-~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE-EEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeE
Confidence 6899999998 567999999999999999998543 3333 235799999998 67799999764344688887655555
Q ss_pred EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE-----------ecCCCceEEEEEECCEEEEEeC
Q psy5751 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV-----------YSNCTYPFGLSITDEKYYWTDW 192 (232)
Q Consensus 124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-----------~~~~~~p~gla~~~~~ly~td~ 192 (232)
+.+........|+|+++.. ++++|++|...++|++++.++...+.. ...+..|.||..++++||+++.
T Consensus 108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~ 186 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT 186 (306)
T ss_dssp EEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET
T ss_pred EEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC
Confidence 5555433356789999865 478999999899999999886532222 1245689999777889999999
Q ss_pred CCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCC
Q psy5751 193 KTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 193 ~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
.+++|.+++.++ ......... .....|.||++.+++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG 223 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEG 223 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTC
T ss_pred CCCEEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCC
Confidence 999999999874 221111110 112579999998765
No 59
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.72 E-value=1.8e-15 Score=122.42 Aligned_cols=202 Identities=13% Similarity=0.071 Sum_probs=142.8
Q ss_pred eEEEEEeCCCCEEEEEE------------cCCCCcEEEEEcCCC--ceeEEEeCC------CCCccEEEEeec---CCeE
Q psy5751 2 LIGITVDCVEGQVYYSS------------VADKSSIKRAHLDGK--NVEDVITTN------IRSPEGLTFDWV---NRVL 58 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d------------~~~~~~i~~~~~~g~--~~~~~~~~~------~~~p~gl~~d~~---~~~l 58 (232)
|+.|++++ ++.+|.+. ...+ +|++++++.. ..+++...+ ...|.||.+... ...|
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G-~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSG-KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CC-EEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCC-eEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 57888887 79999986 1334 8999999832 333333322 248999999662 3379
Q ss_pred EEEeCC--CCe--EEEEeCCCCCCEEEEe---CCCCCceEEEEeCCCCeEEEEEcC---------------CCCCcEEEE
Q psy5751 59 YWTDSQ--MDT--ISMANLNDDQPKVIVS---KDLVNPRGIVVHPYYRKLFWSDWN---------------RSGPKIEWS 116 (232)
Q Consensus 59 y~~d~~--~~~--I~~~~~~g~~~~~~~~---~~~~~p~~iavd~~~~~ly~~d~~---------------~~~~~I~~~ 116 (232)
|+++.. ... |++.+.++.....+.. ..+..|+++++++ .|.+|+++.. ...++++++
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 999877 334 5566666544332222 5688999999998 7898888641 234678888
Q ss_pred eCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC----ceEEEecCCCceEEEEEE-C-CEEEEE
Q psy5751 117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR----VRRKVYSNCTYPFGLSIT-D-EKYYWT 190 (232)
Q Consensus 117 ~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~----~~~~~~~~~~~p~gla~~-~-~~ly~t 190 (232)
+.. ..+++... +..||||+++++++.||++|+..++|++++++.. .++.+ .....|+|++++ + |+||++
T Consensus 209 d~~--~~~~~~~~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 209 SPN--DVRVVAEG--FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp CTT--CCEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred ECC--eEEEeecC--CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 763 45555555 8899999999999999999999999999998732 22334 445789999998 4 899995
Q ss_pred -eCCCCcEEEEeCC---CCCcceEE
Q psy5751 191 -DWKTNRIESANKE---GERAPSIA 211 (232)
Q Consensus 191 -d~~~~~i~~~~~~---g~~~~~i~ 211 (232)
.+...+|.+++|+ ++.+-.|+
T Consensus 284 ~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 284 CHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred ecCCceEEEEECCCCCCCCEEEEEE
Confidence 5676778777777 44444444
No 60
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=5.3e-14 Score=113.16 Aligned_cols=219 Identities=9% Similarity=0.105 Sum_probs=160.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CC--------CccEEEEeecCCeEEEEeC-CCCeEEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IR--------SPEGLTFDWVNRVLYWTDS-QMDTISMA 71 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~--------~p~gl~~d~~~~~ly~~d~-~~~~I~~~ 71 (232)
|.++++++..+.+|+++..++ .|..++++.......+... .. .|.++++++.++.+|+++. ..+.|++.
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNS-AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV 169 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred cceEEECCCCCEEEEEecCCC-EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence 457889998889999999888 9999999865543333321 11 2789999998899999984 46789999
Q ss_pred eCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEE
Q psy5751 72 NLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 72 ~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly 148 (232)
++........+......|.+++++|.++.||+++. .+.|...++............ ....|.++++++++++||
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred cCCCCceEEEecCCCCccceEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 99876554444424456999999998888999875 457888888765444333321 144677899999999999
Q ss_pred EEECCCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCC-CcceEEeccCCcceeEEEEE
Q psy5751 149 WVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGE-RAPSIALDMMGTTYMYGIAA 225 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~-~~~~i~~~~~~~~~p~gi~~ 225 (232)
+++...+.|..++++..+...... ...|.++++. ++++|+++...+.|..++..+. ....+. ....|.++++
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~ 321 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD----TPTHPNSLAL 321 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE----CCSEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe----cCCCCCeEEE
Confidence 999888999999997655433322 3446778885 5679999998999999998743 333332 2447888888
Q ss_pred EcCC
Q psy5751 226 VPSS 229 (232)
Q Consensus 226 ~~~~ 229 (232)
.+++
T Consensus 322 s~dg 325 (353)
T 3vgz_A 322 SADG 325 (353)
T ss_dssp CTTS
T ss_pred cCCC
Confidence 7654
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.5e-13 Score=110.50 Aligned_cols=217 Identities=13% Similarity=0.137 Sum_probs=158.6
Q ss_pred eEEEEEeCCCCEEEEEEcC------CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVA------DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~------~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
|.++++++..+.||+++.. .+ .|+.++.+.......+.. ...|.++++++.++.+|+++...+.|.+++..+
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~-~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGG-VVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESE-EEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCc-cEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 6789999988999999966 44 799999886654344433 246999999998888999999889999999987
Q ss_pred CCCEEEEeC-CCC--------CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751 76 DQPKVIVSK-DLV--------NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 76 ~~~~~~~~~-~~~--------~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
......+.. ... .|.+++++|.++.||+++... .++|+..++........+... ...|.++++++++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-ESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKR 198 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-SCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-CceEEEEcCCCCceEEEecCC-CCccceEEECCCCCE
Confidence 665444432 211 278999999888999998642 567999998766544444322 456999999999899
Q ss_pred EEEEECCCCcEEEEecCCCceEEEec-----CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcc
Q psy5751 147 LCWVDADSKSLECMTIRNRVRRKVYS-----NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTT 218 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~g~~~~~~~~-----~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~ 218 (232)
||+++. .+.|..+++...+...... ....+.++++. ++.||+++...+.|..++..+ +..+.+.. .
T Consensus 199 l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----~ 272 (353)
T 3vgz_A 199 LYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA-----P 272 (353)
T ss_dssp EEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC-----S
T ss_pred EEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-----C
Confidence 999875 6789999988665433322 23456788885 668999999889999999874 43333432 2
Q ss_pred eeEEEEEEcC
Q psy5751 219 YMYGIAAVPS 228 (232)
Q Consensus 219 ~p~gi~~~~~ 228 (232)
.|.++++.++
T Consensus 273 ~~~~~~~s~d 282 (353)
T 3vgz_A 273 ESLAVLFNPA 282 (353)
T ss_dssp SCCCEEEETT
T ss_pred CCceEEECCC
Confidence 3456666554
No 62
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.69 E-value=1.1e-13 Score=111.63 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=154.7
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE------eCCCCCccEEEEee---cCCeEEEEeC--CCCeEE
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI------TTNIRSPEGLTFDW---VNRVLYWTDS--QMDTIS 69 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~------~~~~~~p~gl~~d~---~~~~ly~~d~--~~~~I~ 69 (232)
.|.+|++.+ ++.||++....+ +|+++..++.....+. ..+...+.||++++ .++.||++.+ ..++|.
T Consensus 33 ~P~~ia~~p-dG~llVter~~G-~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 33 SPWGLAPLP-GGDLLVSSRDEA-TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SEEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CceEEEEcC-CCcEEEEEecCC-EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 478999998 678999998667 8999987644433332 12456889999997 3688998653 457899
Q ss_pred EEeCCCC--------CCEEEEe----CCCCCceEEEEeCCCCeEEEEEcC-----------CCCCcEEEEeCCCC-----
Q psy5751 70 MANLNDD--------QPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWN-----------RSGPKIEWSNLDGT----- 121 (232)
Q Consensus 70 ~~~~~g~--------~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~-----------~~~~~I~~~~~~g~----- 121 (232)
+..+++. ..++++. .......+|++++ .|.||++... ...++|.|++.+|+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 9988762 2455554 2334567899998 7899999531 12589999999987
Q ss_pred ---CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCce------------------EEEecCCCce
Q psy5751 122 ---DREIFLKAADLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRVR------------------RKVYSNCTYP 177 (232)
Q Consensus 122 ---~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~~------------------~~~~~~~~~p 177 (232)
..++.... +.+|.||++|++ +.||++|.+.. +|.++.. |.+- ..+......|
T Consensus 190 Pf~~~~i~a~G--~RNp~Gla~dp~-G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 190 PFPGSPVYSYG--HRNVQGLAWDDK-QRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp SSTTCCEEEBC--CSBCCEEEECTT-CCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred CCCCCeEEeeC--CCCcceEEECCC-CCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 44555444 889999999995 99999998753 4555532 2210 0001112478
Q ss_pred EEEEEECCEEEEEeCCCCcEEEEeCCCCC--cceEEeccCCcceeEEEEEEcCC
Q psy5751 178 FGLSITDEKYYWTDWKTNRIESANKEGER--APSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 178 ~gla~~~~~ly~td~~~~~i~~~~~~g~~--~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
.|+++.++.+|.+.....+|.++..++.. .+...+-......|.+|++.+++
T Consensus 266 ~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG 319 (347)
T 3das_A 266 SGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD 319 (347)
T ss_dssp EEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT
T ss_pred cceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC
Confidence 99999999999999999999999887542 12112211235679999988764
No 63
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.69 E-value=1.1e-14 Score=118.35 Aligned_cols=222 Identities=9% Similarity=0.080 Sum_probs=150.9
Q ss_pred CeEEEEEeCCCCE-EEEEEcCCCCcEEEEEcCCCceeEE------EeCCCCCccEEEEeec---CCeEEEEeCC------
Q psy5751 1 MLIGITVDCVEGQ-VYYSSVADKSSIKRAHLDGKNVEDV------ITTNIRSPEGLTFDWV---NRVLYWTDSQ------ 64 (232)
Q Consensus 1 ~~~~i~~d~~~~~-ly~~d~~~~~~i~~~~~~g~~~~~~------~~~~~~~p~gl~~d~~---~~~ly~~d~~------ 64 (232)
.|.+|++++ +++ ||+++.. + +|++++.+|...+.+ .......+.+|++++. ++.||+++..
T Consensus 19 ~P~~i~~~p-dG~~l~V~e~~-G-~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLP-DNHGMLITLRG-G-ELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECS-TTCCEEEEETT-T-EEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcC-CCCEEEEEeCC-c-eEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 488999998 566 9999974 5 899998766432111 1223356789999985 7899999754
Q ss_pred -CCeEEEEeCCCC-----CCEEEEeC------CCCCceEEEEeCCCCeEEEEEcCCC-----------CCcEEEEeCCCC
Q psy5751 65 -MDTISMANLNDD-----QPKVIVSK------DLVNPRGIVVHPYYRKLFWSDWNRS-----------GPKIEWSNLDGT 121 (232)
Q Consensus 65 -~~~I~~~~~~g~-----~~~~~~~~------~~~~p~~iavd~~~~~ly~~d~~~~-----------~~~I~~~~~~g~ 121 (232)
..+|.+.++++. ..++++.. ....+.+|+++| +|.||++..... .++|.|++.+|.
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 457998887654 23444431 234578999998 789999974321 468999999987
Q ss_pred -------------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCce------------------
Q psy5751 122 -------------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRVR------------------ 167 (232)
Q Consensus 122 -------------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~~------------------ 167 (232)
..++.... +.+|.+|++|+.+++||++|.... +|.++... .+.
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G--~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G-~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYG--IRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKG-KNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEEC--CSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTT-CBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCcCCCCCCccEEEEc--CcCccceEEECCCCCEEEEecCCCCCcEEeEeccC-CcCCCCCccCCCCCCCCccCc
Confidence 34555544 789999999997799999998743 44444221 110
Q ss_pred ------------EEEecCCCceEEEEEE--------CCEEEEEeCCCCcEEEEeCCCCCcc-eEEeccCCcceeEEEEEE
Q psy5751 168 ------------RKVYSNCTYPFGLSIT--------DEKYYWTDWKTNRIESANKEGERAP-SIALDMMGTTYMYGIAAV 226 (232)
Q Consensus 168 ------------~~~~~~~~~p~gla~~--------~~~ly~td~~~~~i~~~~~~g~~~~-~i~~~~~~~~~p~gi~~~ 226 (232)
.........|.|+++. ++.+|++++..++|.++..++.... ...+-......|.+|++.
T Consensus 252 ~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred ccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 0001122468899985 4899999999999999998854221 111111113479999988
Q ss_pred cCC
Q psy5751 227 PSS 229 (232)
Q Consensus 227 ~~~ 229 (232)
+++
T Consensus 332 pdG 334 (353)
T 2g8s_A 332 PDG 334 (353)
T ss_dssp TTS
T ss_pred CCC
Confidence 765
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=2e-13 Score=109.04 Aligned_cols=218 Identities=10% Similarity=-0.007 Sum_probs=153.1
Q ss_pred EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEeC
Q psy5751 6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVSK 84 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~ 84 (232)
.|+...+.+|+++..++ .|..++++.......+......| ++++++.++.||+++...+.|+++++++... .....
T Consensus 4 ~~~~~~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~- 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLR-RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ- 80 (331)
T ss_dssp ---CCCCEEEEEEGGGT-EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-
T ss_pred eEcCCCCEEEEEecCCC-eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-
Confidence 36667899999999888 99999998666545555555566 9999998888999999889999999987765 44443
Q ss_pred CCCCceE-EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc-EEEEec
Q psy5751 85 DLVNPRG-IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS-LECMTI 162 (232)
Q Consensus 85 ~~~~p~~-iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~-i~~~~~ 162 (232)
....|.. ++++|.++.||........+.|...+++.......+.. ...|.++++++++++||+++...+. |...++
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 3456777 99999777888333221122899999886654444433 5678999999998889999988777 777666
Q ss_pred CCCce-----EEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCc-ceEEeccCCcceeEEEEEEcCC
Q psy5751 163 RNRVR-----RKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERA-PSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 163 ~g~~~-----~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~-~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+.... .........|.++++. +.+||++....+.|..++...... +.+.. ......|.++++-+++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~~~spdg 232 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA-VGTNNLPGTIVVSRDG 232 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE-EECSSCCCCEEECTTS
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee-ccCCCCCceEEECCCC
Confidence 53221 1223445668999995 447999999999999999874332 11111 1123567777776654
No 65
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=5.6e-14 Score=111.02 Aligned_cols=185 Identities=11% Similarity=0.095 Sum_probs=136.1
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~ 116 (232)
+.+......|+++++|+.++.|||++...+.|++++.++. ...+ ......|.++++++ +|.||+++.. ...|.++
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~-~~~~~~~~~l~~~~-dg~l~v~~~~--~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPE-MHPSHHQNGHCLNK-QGHLIACSHG--LRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEE-ESSCSSEEEEEECT-TCCEEEEETT--TTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEE-ECCCCCcceeeECC-CCcEEEEecC--CCeEEEE
Confidence 4555667899999999988789999999999999999987 4333 34567899999998 7889999864 4579999
Q ss_pred eCCCCCcEEEEEc---CCCCCcceEEEeCCCCEEEEEEC-----------------CCCcEEEEecCCCceEEEecCCCc
Q psy5751 117 NLDGTDREIFLKA---ADLKLPNSLAVDFRTDELCWVDA-----------------DSKSLECMTIRNRVRRKVYSNCTY 176 (232)
Q Consensus 117 ~~~g~~~~~~~~~---~~~~~p~~l~~d~~~~~Ly~~d~-----------------~~~~i~~~~~~g~~~~~~~~~~~~ 176 (232)
+......+.+... .....|+++++|++ ++||++|. ..+.|++++.+ +..+.+...+..
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 9844444444321 11457899999996 78999875 24589999988 445556678889
Q ss_pred eEEEEEE-CCEEEEEeCCCCcEEEEeCC--CCC-cceEEeccCCcceeEEEEEEcCC
Q psy5751 177 PFGLSIT-DEKYYWTDWKTNRIESANKE--GER-APSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 177 p~gla~~-~~~ly~td~~~~~i~~~~~~--g~~-~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
|.|+++. ++.++|++...++|.+++.+ |.. ...-.+ ......|.+|++.+++
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGG 229 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTS
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCC
Confidence 9999995 44444999999999999875 332 111111 2345678899887765
No 66
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.66 E-value=3.1e-14 Score=115.80 Aligned_cols=188 Identities=20% Similarity=0.223 Sum_probs=132.4
Q ss_pred eEEEEEeCC---CCEEEEEEcCC-----CCcEEEEEcCCCc---eeEEEe------CCCCCccEEEEeecCCeEEEEeCC
Q psy5751 2 LIGITVDCV---EGQVYYSSVAD-----KSSIKRAHLDGKN---VEDVIT------TNIRSPEGLTFDWVNRVLYWTDSQ 64 (232)
Q Consensus 2 ~~~i~~d~~---~~~ly~~d~~~-----~~~i~~~~~~g~~---~~~~~~------~~~~~p~gl~~d~~~~~ly~~d~~ 64 (232)
|.+|++++. ++.||+++... . +|.+++.++.. .+.++. .....+.+|++++ .+.||+++..
T Consensus 77 p~gia~~pdf~~~g~lYv~~~~~~~~~~~-~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~ 154 (352)
T 2ism_A 77 LLGLALHPRFPQEPYVYAYRTVAEGGLRN-QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGE 154 (352)
T ss_dssp EEEEEECTTTTTSCEEEEEEEECTTSSEE-EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCC
T ss_pred ceeEEECCCCCCCCEEEEEEecCCCCCcc-EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECC
Confidence 789999986 68999998754 5 89999988642 223332 1235788999999 4589999742
Q ss_pred -------------CCeEEEEeCCCC-------------CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC------Cc
Q psy5751 65 -------------MDTISMANLNDD-------------QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG------PK 112 (232)
Q Consensus 65 -------------~~~I~~~~~~g~-------------~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~------~~ 112 (232)
.++|++++.+|. ..++.. ..+.+|.++++|+.++.||+++.+... -+
T Consensus 155 ~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 155 VYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp TTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-ECCSEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 368999999983 333433 367889999999988999999987432 13
Q ss_pred EEEEeCCCC--------------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc-------eEEEe
Q psy5751 113 IEWSNLDGT--------------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV-------RRKVY 171 (232)
Q Consensus 113 I~~~~~~g~--------------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~-------~~~~~ 171 (232)
|.++...+. ....+..-.....|.|+++. .+.||+++...++|.++++++.. ...+.
T Consensus 234 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~ 311 (352)
T 2ism_A 234 VNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL 311 (352)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheec
Confidence 555543220 01111111114578999994 48999999999999999998543 23344
Q ss_pred cCCCceEEEEEE-CCEEEEEeCCC
Q psy5751 172 SNCTYPFGLSIT-DEKYYWTDWKT 194 (232)
Q Consensus 172 ~~~~~p~gla~~-~~~ly~td~~~ 194 (232)
.....|.++++. ++.||++++..
T Consensus 312 ~~~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 312 SGFGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp ESSCCEEEEEECTTSCEEEEECST
T ss_pred ccCCCeeEEEECCCCcEEEEEeCC
Confidence 556789999996 78999998753
No 67
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.65 E-value=9.2e-14 Score=110.16 Aligned_cols=185 Identities=13% Similarity=0.094 Sum_probs=136.0
Q ss_pred eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEE
Q psy5751 36 EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW 115 (232)
Q Consensus 36 ~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~ 115 (232)
+.++.....-++|.+.++..+.|||+|...++|++++.++.....+ . ....|.++++++ +|.||++. ...|++
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~-~~~~~~~i~~~~-dG~l~v~~----~~~l~~ 77 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-T-MDAPVSSVALRQ-SGGYVATI----GTKFCA 77 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-E-CSSCEEEEEEBT-TSSEEEEE----TTEEEE
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-e-CCCceEEEEECC-CCCEEEEE----CCeEEE
Confidence 3455567788999999998899999999999999999988665433 2 235799999998 56688876 246999
Q ss_pred EeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-----------CCCcEEEEecCCCceEEEecCCCceEEEE
Q psy5751 116 SNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-----------DSKSLECMTIRNRVRRKVYSNCTYPFGLS 181 (232)
Q Consensus 116 ~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-----------~~~~i~~~~~~g~~~~~~~~~~~~p~gla 181 (232)
++.++...+.+.... ....|+++++|++ ++||+++. ..+.|++++.+|. ...+...+..|.|++
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLD 155 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEE
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceE
Confidence 998876666555431 1345899999997 77999873 3458999988764 444566778899999
Q ss_pred EE--CCEEEEEeCCCCcEEEEeCC---CCCc--ceEEeccCCcceeEEEEEEcCC
Q psy5751 182 IT--DEKYYWTDWKTNRIESANKE---GERA--PSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 182 ~~--~~~ly~td~~~~~i~~~~~~---g~~~--~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+. +..|||++...++|.+++.+ |... +.+.........|.|+++..++
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 95 55899999999999999864 3211 1222111234689999998765
No 68
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.64 E-value=2.2e-13 Score=110.82 Aligned_cols=200 Identities=16% Similarity=0.172 Sum_probs=139.3
Q ss_pred eEEEEEeCC---CCEEEEEEcC---C----CCcEEEEEcCCC-----ceeEEEe----CCCCCccEEEEeecCCeEEEEe
Q psy5751 2 LIGITVDCV---EGQVYYSSVA---D----KSSIKRAHLDGK-----NVEDVIT----TNIRSPEGLTFDWVNRVLYWTD 62 (232)
Q Consensus 2 ~~~i~~d~~---~~~ly~~d~~---~----~~~i~~~~~~g~-----~~~~~~~----~~~~~p~gl~~d~~~~~ly~~d 62 (232)
|.+|++++. ++.||+++.. . . +|.|+..++. ..+.++. .....+.+|++++ .+.||++.
T Consensus 75 ~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~-~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~ 152 (354)
T 3a9g_A 75 LLGLALHPEFPKKSWVYLYASYFAEGGHIRN-RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITT 152 (354)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECGGGCEEE-EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEEC
T ss_pred eeeEEeCCCCCcCCEEEEEEeccCCCCCcce-EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEE
Confidence 679999986 7999999863 2 4 8999998865 1223322 2245688999998 56799996
Q ss_pred CC-------------CCeEEEEeCCCCC--------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-CcEEEEeCCC
Q psy5751 63 SQ-------------MDTISMANLNDDQ--------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-PKIEWSNLDG 120 (232)
Q Consensus 63 ~~-------------~~~I~~~~~~g~~--------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-~~I~~~~~~g 120 (232)
.. .++|++++.+|.. .++. ...+.+|.+|++|+.++.||+++.+... ..|.++...+
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~ 231 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGG 231 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTC
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCC
Confidence 32 3689999999973 3343 4478899999999988999999976432 2355444211
Q ss_pred C--------------CcEEEEEc-CCCCCcceEEEeC------CCCEEEEEECCCCcEEEEecCCCc-e---EEEec-CC
Q psy5751 121 T--------------DREIFLKA-ADLKLPNSLAVDF------RTDELCWVDADSKSLECMTIRNRV-R---RKVYS-NC 174 (232)
Q Consensus 121 ~--------------~~~~~~~~-~~~~~p~~l~~d~------~~~~Ly~~d~~~~~i~~~~~~g~~-~---~~~~~-~~ 174 (232)
. ....+..- .....|.|+++.. ..+.||+++...++|+++++++.. . +.+.. ..
T Consensus 232 nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 311 (354)
T 3a9g_A 232 NYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVF 311 (354)
T ss_dssp BCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTS
T ss_pred cCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCC
Confidence 0 01111111 1145799999931 358999999999999999998532 2 33443 36
Q ss_pred CceEEEEEE-CCEEEEEeCC-CC---------cEEEEeCCC
Q psy5751 175 TYPFGLSIT-DEKYYWTDWK-TN---------RIESANKEG 204 (232)
Q Consensus 175 ~~p~gla~~-~~~ly~td~~-~~---------~i~~~~~~g 204 (232)
..|.++++. ++.||++++. .+ +|+|+.+.+
T Consensus 312 ~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 312 GRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp CCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred CCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 789999996 7899999873 44 788877654
No 69
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.63 E-value=1.2e-13 Score=109.87 Aligned_cols=185 Identities=15% Similarity=0.164 Sum_probs=134.0
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~ 116 (232)
+.+..+...++|.+.++.++.|||++..+++|++.+.+|. ...+. .....|+++++++ +|.||+++.. ...|.++
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~-~~~~~~~gl~~d~-dG~l~v~~~~--~~~v~~~ 112 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLL-DATAFTNGNAVDA-QQRLVHCEHG--RRAITRS 112 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEE-ESCSCEEEEEECT-TSCEEEEETT--TTEEEEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEe-CCCCccceeeECC-CCCEEEEECC--CCEEEEE
Confidence 4455677899999999988889999999999999999765 33333 3456799999998 7889999865 4579999
Q ss_pred eCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-----------------CCCcEEEEecCCCceEEEecCCCc
Q psy5751 117 NLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-----------------DSKSLECMTIRNRVRRKVYSNCTY 176 (232)
Q Consensus 117 ~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-----------------~~~~i~~~~~~g~~~~~~~~~~~~ 176 (232)
+.+|. .+.+.... .+..|+++++|++ ++||++|. ..+.|++++++++..+.+. .+..
T Consensus 113 ~~~g~-~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~ 189 (305)
T 3dr2_A 113 DADGQ-AHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH 189 (305)
T ss_dssp CTTSC-EEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred CCCCC-EEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence 98855 44443211 1457999999996 78999874 1357999999766555555 7788
Q ss_pred eEEEEEE--CCEEEEEeCCC-----CcEEEEeCCCCCcceEE-eccCCcceeEEEEEEcCC
Q psy5751 177 PFGLSIT--DEKYYWTDWKT-----NRIESANKEGERAPSIA-LDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 177 p~gla~~--~~~ly~td~~~-----~~i~~~~~~g~~~~~i~-~~~~~~~~p~gi~~~~~~ 229 (232)
|.|+++. +..||+++... +.|.+++.++....... +.......|.||++..++
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G 250 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGG 250 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTS
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCC
Confidence 9999995 45799999874 78999987743322111 111234568888887654
No 70
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.62 E-value=1.9e-12 Score=100.55 Aligned_cols=192 Identities=12% Similarity=0.010 Sum_probs=138.5
Q ss_pred eEEEEEeCCCCEEEEEEc--CCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSV--ADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~--~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
|.|++|++. ++||++.- ..+ .|.++++........+ ......+.|++++ ++.||++....+.++++|.+....
T Consensus 23 ~~Gl~~~~d-g~Lyvstg~~~~s-~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYAEN-DTLFESTGLYGRS-SVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEECST-TEEEEEECSTTTC-EEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred cccEEEeCC-CeEEEECCCCCCC-EEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 679999974 79999974 345 8999999866543333 2333466677887 689999999999999999886544
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCC
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
...+... .|.+..+.+.+++||+++ + .++|..++.+......-+... .+..|+++.+. +++||.+....
T Consensus 99 ~~~i~~g--~~~g~glt~Dg~~l~vs~-g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~ 171 (266)
T 2iwa_A 99 IKNFTHQ--MKDGWGLATDGKILYGSD-G--TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQT 171 (266)
T ss_dssp EEEEECC--SSSCCEEEECSSSEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS
T ss_pred EEEEECC--CCCeEEEEECCCEEEEEC-C--CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCC
Confidence 3334322 244444444489999998 3 468999998775543332211 14578999988 47999999889
Q ss_pred CcEEEEecCCCceE-EE-ecC------------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751 155 KSLECMTIRNRVRR-KV-YSN------------CTYPFGLSIT--DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 155 ~~i~~~~~~g~~~~-~~-~~~------------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g 204 (232)
+.|.++|+...+.. .+ ... ...|.|||++ .+++|+|....++++.++...
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999999876653 33 221 1468999997 569999999999999888653
No 71
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=2.2e-13 Score=108.04 Aligned_cols=194 Identities=13% Similarity=0.165 Sum_probs=139.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE-EeC----CCCCccEEEEeecCCeEEEEeCCC-----------
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV-ITT----NIRSPEGLTFDWVNRVLYWTDSQM----------- 65 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~-~~~----~~~~p~gl~~d~~~~~ly~~d~~~----------- 65 (232)
|.++.+++..+.||+++.. + .|++++.+ .....+ ... ....|.++++|+ .++||+++...
T Consensus 73 ~~~i~~~~~~g~l~v~~~~-~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 73 PAGCQCDRDANQLFVADMR-L-GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEEEEECSSSSEEEEEETT-T-EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTT
T ss_pred CceEEEecCCCcEEEEECC-C-CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccc
Confidence 6789999854899999864 3 69999988 343333 211 124689999998 56799998764
Q ss_pred ----CeEEEEeCCCCCCEEEEeCCCCCceEEEEe----CCCCeEEEEEcCCCCCcEEEEeCCCCCc----EEEEEcC-CC
Q psy5751 66 ----DTISMANLNDDQPKVIVSKDLVNPRGIVVH----PYYRKLFWSDWNRSGPKIEWSNLDGTDR----EIFLKAA-DL 132 (232)
Q Consensus 66 ----~~I~~~~~~g~~~~~~~~~~~~~p~~iavd----~~~~~ly~~d~~~~~~~I~~~~~~g~~~----~~~~~~~-~~ 132 (232)
+.|++++.++.. ..+.. ....|.+++++ +.++.||+++.. .++|++.++++... ..+.... ..
T Consensus 149 ~~~~~~l~~~~~~g~~-~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 149 QEKFGSIYCFTTDGQM-IQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp SSSCEEEEEECTTSCE-EEEEE-EESSEEEEEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred cCCCCeEEEECCCCCE-EEecc-CCCCcceEEEecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCC
Confidence 689999988543 33332 45678999999 855689999865 46788888652221 1222211 01
Q ss_pred -CCcceEEEeCCCCEEEEEECCCCcEEEEecC-CCceEEEecCCCceEEEEEE-CC-EEEEEeCCCCcEEEEeCCC
Q psy5751 133 -KLPNSLAVDFRTDELCWVDADSKSLECMTIR-NRVRRKVYSNCTYPFGLSIT-DE-KYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 133 -~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~-g~~~~~~~~~~~~p~gla~~-~~-~ly~td~~~~~i~~~~~~g 204 (232)
..|.++++|++ +.||+++...+.|.+++++ |.....+......|.++++. ++ .||+++..++.|.+++...
T Consensus 225 ~~~p~~i~~d~~-G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 225 EGGADGMDFDED-NNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SCEEEEEEEBTT-CCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCceEECCC-CCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 56999999996 7999999888899999998 55444444444778999985 44 5999999888999999873
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=1.1e-12 Score=104.69 Aligned_cols=197 Identities=9% Similarity=0.025 Sum_probs=144.7
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccE-EEEeecCCeEEEEeCCC-C--eEEEEeCCCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEG-LTFDWVNRVLYWTDSQM-D--TISMANLNDDQP 78 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~g-l~~d~~~~~ly~~d~~~-~--~I~~~~~~g~~~ 78 (232)
++++++..+.||+++...+ .|++++++.... ...+... ..|.. +++++.++.|| +.... + .|.+.+++....
T Consensus 44 ~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQ-TLVQIETQLEPPKVVAIQEG-QSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTC-EEEEEECSSSSCEEEEEEEC-SSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEE
T ss_pred eEEEcCCCCEEEEEeCCCC-eEEEEECCCCceeEEecccC-CCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCe
Confidence 8899998888999999888 999999986654 3334333 56777 99999888899 54444 4 899999987655
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCc-EEEEeCCCCCcEE----EEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPK-IEWSNLDGTDREI----FLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~-I~~~~~~g~~~~~----~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
...+. ....|.+++++|.++.||+++.. ... |...+++...... ..... ...|.++++++++++||++...
T Consensus 121 ~~~~~-~~~~~~~~~~spdg~~l~~~~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~ 196 (331)
T 3u4y_A 121 ISTIP-IPYDAVGIAISPNGNGLILIDRS--SANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLI 196 (331)
T ss_dssp EEEEE-CCTTEEEEEECTTSSCEEEEEET--TTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETT
T ss_pred EEEEE-CCCCccceEECCCCCEEEEEecC--CCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCC
Confidence 44444 34578999999977789999875 344 6655555432211 11122 4679999999998889999998
Q ss_pred CCcEEEEecCCCce---EEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751 154 SKSLECMTIRNRVR---RKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERA 207 (232)
Q Consensus 154 ~~~i~~~~~~g~~~---~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~ 207 (232)
.+.|..++++.... .........|.++++. +.+||++....+.|..++..+...
T Consensus 197 ~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 197 GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 99999999986554 2223345678899985 557999988888899999875544
No 73
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.59 E-value=8.5e-12 Score=101.84 Aligned_cols=217 Identities=17% Similarity=0.193 Sum_probs=163.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.+++|++..+.||++...++ .|..+++........+... ..+.++++++.++.||++....+.|.+.++........
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~-~i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSN-DVSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT 111 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGT-EEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cceEEECCCCCEEEEECCCCC-eEEEEECCCCeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEE
Confidence 568999998889999987777 8999999766544444433 38899999998899999998889999999987665544
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
+. ....+.++++++.++.||++... .+.|...++........+.. ...|.+++++++++.||++....+.|...+
T Consensus 112 ~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 112 VK-TGKSPLGLALSPDGKKLYVTNNG--DKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp EE-CSSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred Ee-CCCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 44 34578999999977788888754 56799999876554444443 467899999999889999988889999999
Q ss_pred cCCCceEEEecCCCceEEEEEE--CCEEEEEeC--CCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEEcCC
Q psy5751 162 IRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW--KTNRIESANKEGER-APSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 162 ~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~--~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++.............+.++++. +..||++.. ..+.|..++..... ...+. ....|.++++.+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg 255 (391)
T 1l0q_A 187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP----VGPDPAGIAVTPDG 255 (391)
T ss_dssp TTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE----CCSSEEEEEECTTS
T ss_pred CCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe----cCCCccEEEEccCC
Confidence 9877655555555678888884 567888876 67889999987433 22222 13356777766543
No 74
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=2.9e-12 Score=103.22 Aligned_cols=205 Identities=12% Similarity=0.057 Sum_probs=137.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEE--eCC---------CCCccEEEEeecCCeEEEEeCCCCeEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVI--TTN---------IRSPEGLTFDWVNRVLYWTDSQMDTIS 69 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~--~~~---------~~~p~gl~~d~~~~~ly~~d~~~~~I~ 69 (232)
|.++++++..+.||+++..++ .|..++++.. ....+. ... ...+.++++++.++ +|+++...+.|.
T Consensus 88 p~~~a~spdg~~l~~~~~~~~-~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~ 165 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKG-TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY 165 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTT-EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred CEEEEECCCCCEEEEEeCCCC-EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence 567899998889999998777 7888877522 222221 111 12477899999777 999999989999
Q ss_pred EEeCCC-CCCEEEE--e-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEEE--EcCC-----CCCcc
Q psy5751 70 MANLND-DQPKVIV--S-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIFL--KAAD-----LKLPN 136 (232)
Q Consensus 70 ~~~~~g-~~~~~~~--~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~~--~~~~-----~~~p~ 136 (232)
+++++. .....+. . .....|.+++++|.++.||+++.. .+.|...+++. .....+. .... ...|.
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL--SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAA 243 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEE
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcce
Confidence 998872 2222221 1 344579999999977779998865 34566666653 2222221 1110 13488
Q ss_pred eEEEeCCCCEEEEEECCCCcEEEEecCCC-ceEEEe---cCCCceEEEEEE--CCEEEEEeCCCCcEEEE--eCCCCCcc
Q psy5751 137 SLAVDFRTDELCWVDADSKSLECMTIRNR-VRRKVY---SNCTYPFGLSIT--DEKYYWTDWKTNRIESA--NKEGERAP 208 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~-~~~~~~---~~~~~p~gla~~--~~~ly~td~~~~~i~~~--~~~g~~~~ 208 (232)
++++++++++||+++...+.|..++++.. ..+.+. .....|.++++. +.+||+++..++.|..+ +..+...+
T Consensus 244 ~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 89999998899999988888888887622 222222 235568999995 55899999988877777 44444444
Q ss_pred eE
Q psy5751 209 SI 210 (232)
Q Consensus 209 ~i 210 (232)
.+
T Consensus 324 ~~ 325 (347)
T 3hfq_A 324 LL 325 (347)
T ss_dssp EE
T ss_pred ec
Confidence 33
No 75
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=2.6e-12 Score=102.88 Aligned_cols=188 Identities=17% Similarity=0.174 Sum_probs=137.1
Q ss_pred EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCC--CCCcEEEE
Q psy5751 39 ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNR--SGPKIEWS 116 (232)
Q Consensus 39 ~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~--~~~~I~~~ 116 (232)
+......|.++++|+ .+.|||++...+.|++++.++.....+.......|.++++++ ++.||++.... ....|+++
T Consensus 40 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp EESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEE
T ss_pred EeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEE
Confidence 344567889999997 566999998889999999987766555543456799999997 67899987542 12579999
Q ss_pred eCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECC------CCcEEEEecCCCceEEEecCCCceEEEEEE-C-CEE
Q psy5751 117 NLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDAD------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT-D-EKY 187 (232)
Q Consensus 117 ~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~-~~l 187 (232)
+.++.....++.. .....|+++++|++ +++|+++.. .+.|++++.++...+.+......|.++++. + ..|
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEE
Confidence 9988876644431 12457899999997 789999875 468999998876666665566679999996 3 479
Q ss_pred EEEeCCCCcEEEEeCC--CCCcceEE----eccCCcceeEEEEEEcCC
Q psy5751 188 YWTDWKTNRIESANKE--GERAPSIA----LDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 188 y~td~~~~~i~~~~~~--g~~~~~i~----~~~~~~~~p~gi~~~~~~ 229 (232)
|+++...+.|.+++.. |...+.+. ....+...|.+|++..++
T Consensus 197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 244 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD 244 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence 9999888899999984 44333221 111123478999887654
No 76
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=3.4e-12 Score=102.79 Aligned_cols=223 Identities=10% Similarity=0.045 Sum_probs=146.3
Q ss_pred eEEEEEeCCCCEEEEEEcC--CCCcEEEEEcCCCceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVA--DKSSIKRAHLDGKNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~--~~~~i~~~~~~g~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
|.+++|++ +++||+++.. ++ .|+.+++++...+.+. ......|.++++++.++.||+++...+.|.+++++...
T Consensus 42 p~~~a~sp-dg~l~~~~~~~~~~-~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 42 PTYLALSA-KDCLYSVDKEDDEG-GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp CCCEEECT-TCEEEEEEEETTEE-EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred cceEEEcc-CCeEEEEEecCCCc-eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 56789998 4559998864 34 7999888765533332 22346899999999889999999888888888875332
Q ss_pred C-EEEE--eCC---------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CCCcEEEE--EcCCCCCcceEEEeC
Q psy5751 78 P-KVIV--SKD---------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GTDREIFL--KAADLKLPNSLAVDF 142 (232)
Q Consensus 78 ~-~~~~--~~~---------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~~~~~~~--~~~~~~~p~~l~~d~ 142 (232)
. ..+. ... ...|.+++++|.++ ||+++.. ..+|...+++ ......+. .......|.++++++
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp 196 (347)
T 3hfq_A 120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG--SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP 196 (347)
T ss_dssp CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence 2 2221 111 23477899999545 9999876 4567777776 22222221 111144789999999
Q ss_pred CCCEEEEEECCCCcEEEEecCC--CceEEEe--cC-------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcc
Q psy5751 143 RTDELCWVDADSKSLECMTIRN--RVRRKVY--SN-------CTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAP 208 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~g--~~~~~~~--~~-------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~ 208 (232)
++++||+++...+.|..++++. +..+.+. .. ...|.++++. +.+||+++...+.|..++.+ ....+
T Consensus 197 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~ 276 (347)
T 3hfq_A 197 DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLT 276 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEE
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEE
Confidence 9888999999888888887774 3322221 11 1458889985 45799999888888888765 22333
Q ss_pred eEEeccCCcceeEEEEEEcCC
Q psy5751 209 SIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 209 ~i~~~~~~~~~p~gi~~~~~~ 229 (232)
.+.........|.++++-+++
T Consensus 277 ~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 277 LIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp EEEEEECSSSCCCEEEECTTS
T ss_pred EeEEEecCCCCcCeEEECCCC
Confidence 332222223357888876654
No 77
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.57 E-value=9.3e-13 Score=107.08 Aligned_cols=198 Identities=12% Similarity=0.171 Sum_probs=136.0
Q ss_pred eEEEEEeCC---CCEEEEEEcC-------CCCcEEEEEcCCC-----ceeEEEeC------CCCCccEEEEeecCCeEEE
Q psy5751 2 LIGITVDCV---EGQVYYSSVA-------DKSSIKRAHLDGK-----NVEDVITT------NIRSPEGLTFDWVNRVLYW 60 (232)
Q Consensus 2 ~~~i~~d~~---~~~ly~~d~~-------~~~~i~~~~~~g~-----~~~~~~~~------~~~~p~gl~~d~~~~~ly~ 60 (232)
+.+|++++. ++.||+++.. .. +|.++.+++. ..+.++.. ....+.+|++++ .+.||+
T Consensus 68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~-~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv 145 (353)
T 2g8s_A 68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT-AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFI 145 (353)
T ss_dssp EEEEEECTTHHHHCEEEEEEEEECSSSCEEE-EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEE
T ss_pred ceeEEECCCCCCCCEEEEEEeCCCCCCCcee-EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEE
Confidence 468999986 8999999764 34 7999988753 23333321 224578999999 569999
Q ss_pred EeCC-------------CCeEEEEeCCCC-------------CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcE
Q psy5751 61 TDSQ-------------MDTISMANLNDD-------------QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKI 113 (232)
Q Consensus 61 ~d~~-------------~~~I~~~~~~g~-------------~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I 113 (232)
+... .++|++++.+|. ..++. ...+.+|.++++|+.++.||+++.+.. ...|
T Consensus 146 ~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei 224 (353)
T 2g8s_A 146 ALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIW-SYGIRNPQGMAMNPWSNALWLNEHGPRGGDEI 224 (353)
T ss_dssp EECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEE-EECCSEEEEEEEETTTTEEEEEEECSBSCEEE
T ss_pred EECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEE-EEcCcCccceEEECCCCCEEEEecCCCCCcEE
Confidence 9633 368999999987 23333 347788999999998899999997642 1123
Q ss_pred EEEeCCCC--------------------------C-cEEEEEcCCCCCcceEEEeCC------CCEEEEEECCCCcEEEE
Q psy5751 114 EWSNLDGT--------------------------D-REIFLKAADLKLPNSLAVDFR------TDELCWVDADSKSLECM 160 (232)
Q Consensus 114 ~~~~~~g~--------------------------~-~~~~~~~~~~~~p~~l~~d~~------~~~Ly~~d~~~~~i~~~ 160 (232)
.++...+. . ...+..-.....|.|+++... .+.||+++...++|+++
T Consensus 225 ~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~ 304 (353)
T 2g8s_A 225 NIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVM 304 (353)
T ss_dssp ECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEE
T ss_pred eEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEE
Confidence 33221100 0 000010011347899999863 38999999999999999
Q ss_pred ecCCCce---EEEec-CCCceEEEEEE-CCEEEEE-eCCCCcEEEEeC
Q psy5751 161 TIRNRVR---RKVYS-NCTYPFGLSIT-DEKYYWT-DWKTNRIESANK 202 (232)
Q Consensus 161 ~~~g~~~---~~~~~-~~~~p~gla~~-~~~ly~t-d~~~~~i~~~~~ 202 (232)
++++... ..++. ....|.++++. ++.||++ +..+++|+|+.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 305 SVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred EeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 9986532 22332 35689999996 7789996 767889999875
No 78
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.55 E-value=5.6e-12 Score=97.95 Aligned_cols=177 Identities=14% Similarity=0.082 Sum_probs=127.1
Q ss_pred CCccEEEEeecCCeEEEEeC--CCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDS--QMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
..|.||++++. +.||++.. ..+.|.++|+........+. .....+.|++++ +++||++.+. .+++.+++.+.
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~--~~~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL--KNIGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT--CSEEEEEETTT
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec--CCEEEEEECCC
Confidence 35789999974 79999974 46799999998766443333 333455677887 7899999986 57799998874
Q ss_pred CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEEe-c----CCCceEEEEEECCEEEEEeCCC
Q psy5751 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKVY-S----NCTYPFGLSITDEKYYWTDWKT 194 (232)
Q Consensus 121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~-~----~~~~p~gla~~~~~ly~td~~~ 194 (232)
.....-+.. - .|.|..+.+++++||+++ +.++|..+|+.+.+. ..+. . -...|+++++.++.||++.|.+
T Consensus 96 ~~v~~~i~~--g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~ 171 (266)
T 2iwa_A 96 LSNIKNFTH--Q-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT 171 (266)
T ss_dssp TEEEEEEEC--C-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTS
T ss_pred CcEEEEEEC--C-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCC
Confidence 432222222 1 356666666779999998 688999999987654 3332 1 1235789998888999999999
Q ss_pred CcEEEEeCC-CCCcceEEeccCC----------cceeEEEEEEcCC
Q psy5751 195 NRIESANKE-GERAPSIALDMMG----------TTYMYGIAAVPSS 229 (232)
Q Consensus 195 ~~i~~~~~~-g~~~~~i~~~~~~----------~~~p~gi~~~~~~ 229 (232)
+.|.++++. |+....+.+.... ...|.|||+.++.
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 999999997 5566677664211 1378999998763
No 79
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.53 E-value=2.3e-12 Score=103.83 Aligned_cols=164 Identities=12% Similarity=0.060 Sum_probs=123.8
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe------CCCCCceEEEEeCC---CCeEEEEEcC
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS------KDLVNPRGIVVHPY---YRKLFWSDWN 107 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~p~~iavd~~---~~~ly~~d~~ 107 (232)
+++..++..|.+|++.+ .+.||+++...++|++++.++.....+.. .....+.|||++|. ++.||++...
T Consensus 25 ~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 25 RTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 56677899999999998 46799999878999999876544333321 24567899999984 7999998654
Q ss_pred CCCCcEEEEeCCCC--------CcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-------------CCCcEEEEecC
Q psy5751 108 RSGPKIEWSNLDGT--------DREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-------------DSKSLECMTIR 163 (232)
Q Consensus 108 ~~~~~I~~~~~~g~--------~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-------------~~~~i~~~~~~ 163 (232)
....+|.|+.+++. ..++++... ..+....|+++++ ++||++.. ..++|+|++++
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 44678999988762 244554321 2456778999997 79999942 35899999999
Q ss_pred CC--------ceEEEecCCCceEEEEEE-CCEEEEEeCCCC---cEEEEeC
Q psy5751 164 NR--------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTN---RIESANK 202 (232)
Q Consensus 164 g~--------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~---~i~~~~~ 202 (232)
|+ ..+++...+..|.|++++ .+.||++|.+.. +|.++.+
T Consensus 183 G~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~ 233 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKP 233 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECT
T ss_pred CCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcC
Confidence 87 566778899999999997 789999998763 4555543
No 80
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=8e-11 Score=95.30 Aligned_cols=219 Identities=12% Similarity=0.037 Sum_probs=143.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-e---eEEEe-CC---------CCCccEEEEeecCCeEEEEeCCCCe
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-V---EDVIT-TN---------IRSPEGLTFDWVNRVLYWTDSQMDT 67 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~---~~~~~-~~---------~~~p~gl~~d~~~~~ly~~d~~~~~ 67 (232)
|..+++ ..+.||+++..++ .|..++++... . ..... .+ ...+.++++++.++.||+++...+.
T Consensus 102 p~~~~~--dg~~l~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGG-SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTT-EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred cEEEEE--CCCEEEEEECCCC-EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 566777 5788999998877 88888886322 1 11111 11 2345789999988889999998888
Q ss_pred EEEEeCCCCCC-------------EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc----C
Q psy5751 68 ISMANLNDDQP-------------KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA----A 130 (232)
Q Consensus 68 I~~~~~~g~~~-------------~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~----~ 130 (232)
|.+++++.... ..........|++++++|.++.||++... .+.|...+++......+... .
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~--~~~v~v~~~~~g~~~~~~~~~~~~~ 256 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI--GGTVIAFRYADGMLDEIQTVAADTV 256 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--TCEEEEEEEETTEEEEEEEEESCSS
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC--CCeEEEEEecCCceEEeEEEecCCC
Confidence 98887765431 12222456689999999977789998854 45687777764433322211 1
Q ss_pred CCCCcceEEEeCCCCEEEEEECC-CCcEEEEecC--CCceEEEe--cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 131 DLKLPNSLAVDFRTDELCWVDAD-SKSLECMTIR--NRVRRKVY--SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 131 ~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~~~~~--g~~~~~~~--~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
....|.++++++++++||+++.. .+.|..++++ ++..+.+. .....|.++++. +.+||+++..++.|..+..+
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 13457899999998999999988 7777777765 33333332 234578999995 55799999888888775444
Q ss_pred --CCCcceEEeccCCcceeEEEEEE
Q psy5751 204 --GERAPSIALDMMGTTYMYGIAAV 226 (232)
Q Consensus 204 --g~~~~~i~~~~~~~~~p~gi~~~ 226 (232)
+...+.+.. ......|..|++.
T Consensus 337 ~~~g~~~~~~~-~~~~~~p~~v~~~ 360 (361)
T 3scy_A 337 QATGLLTDIKK-DIKVDKPVCLKFV 360 (361)
T ss_dssp TTTCCEEECSC-CEECSSEEEEEEE
T ss_pred CCCCcEeecce-eeeCCCCeEEEEc
Confidence 333332211 1223456666654
No 81
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=1.5e-11 Score=98.22 Aligned_cols=223 Identities=16% Similarity=0.142 Sum_probs=150.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~ 78 (232)
|.+++|++..+.||+++..++ .|..++++ +...+.+ .......+.++++++.++.||+++...+.|.+++++. ...
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAG-NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTT-EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCC-eEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 457899998889999998777 78888874 2211111 1233457999999998889999997778999999876 332
Q ss_pred EE----EEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEE--EEc-C----CCCCcceEEEeCCC
Q psy5751 79 KV----IVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIF--LKA-A----DLKLPNSLAVDFRT 144 (232)
Q Consensus 79 ~~----~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~--~~~-~----~~~~p~~l~~d~~~ 144 (232)
.. ... .....|.+++++|.++.||++... .+.|...+++. ...... ... . ....|.++++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg 242 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 242 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC
Confidence 22 122 334588999999977789998854 45688888754 222211 111 1 02346689999998
Q ss_pred CEEEEEECCCCcEEEEecC--CCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEE--eCCCCCcceEEeccCC
Q psy5751 145 DELCWVDADSKSLECMTIR--NRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESA--NKEGERAPSIALDMMG 216 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~--g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~--~~~g~~~~~i~~~~~~ 216 (232)
+.||++....+.|..++++ ++..+.+ ......|.++++. +.+||++....+.|..+ +..+...+.+..-. .
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~-~ 321 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA-V 321 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE-C
T ss_pred CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc-c
Confidence 8999999888888888887 4433333 2233348899985 56799998777777766 54444444333211 1
Q ss_pred cceeEEEEEEcC
Q psy5751 217 TTYMYGIAAVPS 228 (232)
Q Consensus 217 ~~~p~gi~~~~~ 228 (232)
...|.+|++.++
T Consensus 322 g~~p~~i~~~~~ 333 (343)
T 1ri6_A 322 GQGPMWVVVNAH 333 (343)
T ss_dssp SSSCCEEEEEEE
T ss_pred CCCCeeEEEEcc
Confidence 357899988754
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=9e-11 Score=94.99 Aligned_cols=222 Identities=9% Similarity=0.053 Sum_probs=144.4
Q ss_pred eEEEEEeCCCCEEEEEEcC---CCCcEEEEEcCC--CceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751 2 LIGITVDCVEGQVYYSSVA---DKSSIKRAHLDG--KNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN 74 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~---~~~~i~~~~~~g--~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~ 74 (232)
|..+++++..+.||.++.. .+ .|..+.++. ...+.+. ......|..+++ .++.||+++...+.|.+++++
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~-~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQA-AVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTC-EEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBC
T ss_pred CceEEECCCCCEEEEEEccCCCCC-cEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeC
Confidence 5568999988899999874 34 665555443 3333332 223457888988 478899999888899999876
Q ss_pred CCC----CEEEEe--CC--------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-------cE-----EEEE
Q psy5751 75 DDQ----PKVIVS--KD--------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-------RE-----IFLK 128 (232)
Q Consensus 75 g~~----~~~~~~--~~--------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-------~~-----~~~~ 128 (232)
... ...... .. ..+|.+++++|.+++||+++.. ...|...+++... .. ....
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC--CCEEEEEEEcCCCCcccccceeeccccccee
Confidence 432 111111 11 2345789999977789999875 3456666655332 21 1122
Q ss_pred cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec------CCCceEEEEEE--CCEEEEEeCC-CCcEEE
Q psy5751 129 AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS------NCTYPFGLSIT--DEKYYWTDWK-TNRIES 199 (232)
Q Consensus 129 ~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------~~~~p~gla~~--~~~ly~td~~-~~~i~~ 199 (232)
......|.++++++++.+||+++...+.|..++++++..+.+.. ....|.++++. +.+||+++.. .+.|..
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence 22256799999999988999999888899999887654433321 23557899984 5679999987 777777
Q ss_pred EeCC--CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 200 ANKE--GERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 200 ~~~~--g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
++.+ +...+.+..... ...|.++++-+++
T Consensus 287 ~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg 317 (361)
T 3scy_A 287 FKVDETNGTLTKVGYQLT-GIHPRNFIITPNG 317 (361)
T ss_dssp EEECTTTCCEEEEEEEEC-SSCCCEEEECTTS
T ss_pred EEEcCCCCcEEEeeEecC-CCCCceEEECCCC
Confidence 6654 334333322111 3467788776654
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=1.4e-11 Score=98.29 Aligned_cols=224 Identities=11% Similarity=0.072 Sum_probs=150.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~ 77 (232)
|.+++|++..+.||+++..++ .|..++++ +...+.+.. .....|.++++++.++.||++....+.|.+++++ |..
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEF-RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP 118 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTT-EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred CceEEECCCCCEEEEeecCCC-eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence 457899998889999998766 78887776 444322211 1124899999999888899999888889988874 221
Q ss_pred CEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC-CCcEEE----EEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751 78 PKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG-TDREIF----LKAADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 78 ~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g-~~~~~~----~~~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
...+.. .....|.+++++|.++.||+++.. .++|...+++. ...... ........|.++++++++.+||++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCC--CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 122211 345679999999977789998844 35688888765 333221 1221145789999999988899999
Q ss_pred CCCCcEEEEecCC--CceE---EEec------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC--CCCcceEEeccCC
Q psy5751 152 ADSKSLECMTIRN--RVRR---KVYS------NCTYPFGLSIT--DEKYYWTDWKTNRIESANKE--GERAPSIALDMMG 216 (232)
Q Consensus 152 ~~~~~i~~~~~~g--~~~~---~~~~------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~--g~~~~~i~~~~~~ 216 (232)
...+.|..++++. +..+ .+.. ....|.++++. +..||++....+.|..++.. +...+.+.....+
T Consensus 197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~ 276 (343)
T 1ri6_A 197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE 276 (343)
T ss_dssp TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS
T ss_pred CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC
Confidence 8889999999863 2222 1211 12356678885 55899999888888888877 4444433322212
Q ss_pred cceeEEEEEEcCC
Q psy5751 217 TTYMYGIAAVPSS 229 (232)
Q Consensus 217 ~~~p~gi~~~~~~ 229 (232)
..|.++++.+++
T Consensus 277 -~~~~~~~~s~dg 288 (343)
T 1ri6_A 277 -TQPRGFNVDHSG 288 (343)
T ss_dssp -SSCCCEEECTTS
T ss_pred -CccceEEECCCC
Confidence 237777776543
No 84
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.52 E-value=7.6e-11 Score=96.16 Aligned_cols=196 Identities=19% Similarity=0.183 Sum_probs=153.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.+++|++.++.||++...++ .|..+++........+.. -..+.++++.+.++.||++....+.|.+.++........
T Consensus 76 v~~~~~spdg~~l~~~~~~~~-~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASS-TLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccceEECCCCCEEEEEECCCC-EEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 568999998899999988777 899999987665444443 357899999998888999998889999999877655444
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLEC 159 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~~ 159 (232)
+. ....|.+++++|.++.||++... .+.|...++........+.. ...+.++++++++.+||++.. ..+.|..
T Consensus 154 ~~-~~~~~~~~~~~~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 154 VS-VGRSPKGIAVTPDGTKVYVANFD--SMSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp EE-CCSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEE
T ss_pred Ee-cCCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEE
Confidence 44 34578999999977788888754 46799999876654444433 457899999999889999976 6789999
Q ss_pred EecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751 160 MTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 160 ~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g 204 (232)
+++...+..........|.++++. +..||++....+.|..++...
T Consensus 229 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 229 IDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 999876554444445568888885 558999988889999999874
No 85
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.46 E-value=2.1e-11 Score=98.59 Aligned_cols=183 Identities=14% Similarity=0.084 Sum_probs=126.0
Q ss_pred CCCccEEEEeecCCeEEEEe------------CCCCeEEEEeCCCC--CCEEEEeCC------CCCceEEEEeCC---CC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTD------------SQMDTISMANLNDD--QPKVIVSKD------LVNPRGIVVHPY---YR 99 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d------------~~~~~I~~~~~~g~--~~~~~~~~~------~~~p~~iavd~~---~~ 99 (232)
...|++|++++ .+.+|.+. ...++|++++++.. ..+.+.-.. .-+|.||.+.+. +.
T Consensus 49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 36899999998 78999886 25789999999843 222222222 248999999652 34
Q ss_pred eEEEEEcCCCCCcEEE--EeCCCCCcEEEEE--cCCCCCcceEEEeCCCCEEEEEEC-----------------CCCcEE
Q psy5751 100 KLFWSDWNRSGPKIEW--SNLDGTDREIFLK--AADLKLPNSLAVDFRTDELCWVDA-----------------DSKSLE 158 (232)
Q Consensus 100 ~ly~~d~~~~~~~I~~--~~~~g~~~~~~~~--~~~~~~p~~l~~d~~~~~Ly~~d~-----------------~~~~i~ 158 (232)
+||+++......+|.. .+.++.....+-. ...+..||+++++++ +.+|+++. ..++|+
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 7999987644455555 4454443322221 224788999999997 88888865 246799
Q ss_pred EEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEc-CCC
Q psy5751 159 CMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVP-SSC 230 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~-~~~ 230 (232)
+++.. ..+.+.+.+..|+||++. +..||++|...++|++++.++ ......+.- ..+..|.|+++.. +++
T Consensus 207 r~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 207 YYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD 279 (355)
T ss_dssp EECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC
T ss_pred EEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc
Confidence 98773 566778899999999995 569999999999999999763 222211111 2257899999998 354
No 86
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.46 E-value=1.5e-10 Score=95.68 Aligned_cols=217 Identities=10% Similarity=0.146 Sum_probs=157.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++++++ ++.+|++...++ .|..++++.......+......+.++++++.++.+|++....+.|.+.++........+
T Consensus 173 ~~~~~~~-~~~~~~s~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 173 ETISIPE-HNELWVSQMQAN-AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEEEEGG-GTEEEEEEGGGT-EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred eEEEEcC-CCEEEEEECCCC-EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 4577755 788888888777 89999998755444444445688999999988999999988889999998765433333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCC-----CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNR-----SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~-----~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
. ....|.+++++|.++.||.+.... ..+.|+..++........... ...|.+++++++++.||++....+.|
T Consensus 251 ~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 251 D-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp C-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTTTEE
T ss_pred c-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCCCEE
Confidence 3 345689999999777888877532 145788898876544333322 23788999999988999999999999
Q ss_pred EEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCC--------------CcEEEEeCCCCC-cceEEeccCCccee
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKT--------------NRIESANKEGER-APSIALDMMGTTYM 220 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~--------------~~i~~~~~~g~~-~~~i~~~~~~~~~p 220 (232)
...++++.+..........|.++++. +..||++.... +.|..++..... ...+. ....|
T Consensus 328 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----~~~~~ 403 (433)
T 3bws_A 328 EVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----AGNQP 403 (433)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----CSSSE
T ss_pred EEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----CCCCC
Confidence 99999976655445556678899985 45788887754 488889876433 33332 23467
Q ss_pred EEEEEEcC
Q psy5751 221 YGIAAVPS 228 (232)
Q Consensus 221 ~gi~~~~~ 228 (232)
.++++.++
T Consensus 404 ~~~~~s~d 411 (433)
T 3bws_A 404 TGLDVSPD 411 (433)
T ss_dssp EEEEECTT
T ss_pred ceEEEcCC
Confidence 77777654
No 87
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=5.2e-10 Score=91.51 Aligned_cols=213 Identities=10% Similarity=-0.012 Sum_probs=132.1
Q ss_pred EEEEeCCCCEEEEEEcC---------CCCcEEEEEcCCCceeEEEeCC-------CCCccEEEEeecCCeEEEEeCC-CC
Q psy5751 4 GITVDCVEGQVYYSSVA---------DKSSIKRAHLDGKNVEDVITTN-------IRSPEGLTFDWVNRVLYWTDSQ-MD 66 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~---------~~~~i~~~~~~g~~~~~~~~~~-------~~~p~gl~~d~~~~~ly~~d~~-~~ 66 (232)
++.+++..++||+++.. ++ .|.+++.........+... ...|.++++++.++.||+++.. .+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~-~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTD-YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCC-eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 78999999999999852 34 6888888754432222211 2468999999999999999865 67
Q ss_pred eEEEEeCCCCCCEEE-EeCCCCCceEEEE------------------------------------------------eCC
Q psy5751 67 TISMANLNDDQPKVI-VSKDLVNPRGIVV------------------------------------------------HPY 97 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~-~~~~~~~p~~iav------------------------------------------------d~~ 97 (232)
.|.++| +....... +. . |..+.+ .+.
T Consensus 149 ~v~viD-~t~~~~~~~i~--~--~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLS--S--PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred eEEEEE-CCCCEEeEEcC--C--CceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEec
Confidence 899999 66543222 21 1 111111 111
Q ss_pred CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEECC---------CCcE
Q psy5751 98 YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDAD---------SKSL 157 (232)
Q Consensus 98 ~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~~---------~~~i 157 (232)
.+.+||... .++++.+++.+....++..-. ....|.+ +++++++++||++... .+.|
T Consensus 224 ~~~~~~~~~---~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 224 SGRIVWPVY---SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred CCEEEEEcC---CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence 222333221 224555555443322211100 0123666 8999999999998642 4579
Q ss_pred EEEecCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+.+|....+...-......|.++++. +. .+|++++.++.|..++..+ +..+.+. .-+ ..|++|.+.+.
T Consensus 301 ~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~--~vG-~~P~~~~~~~~ 372 (373)
T 2mad_H 301 TSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV--ELG-SGPQVLSVMNE 372 (373)
T ss_pred EEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeec--CCC-CCCcEEEEccc
Confidence 99999876653333444579999994 45 6888888899999999874 3333321 122 36888887653
No 88
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.43 E-value=4.4e-11 Score=100.27 Aligned_cols=148 Identities=18% Similarity=0.223 Sum_probs=107.2
Q ss_pred CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe--C------CCCCccEEEEeec---CCeEEEEeCC-----
Q psy5751 1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT--T------NIRSPEGLTFDWV---NRVLYWTDSQ----- 64 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~------~~~~p~gl~~d~~---~~~ly~~d~~----- 64 (232)
.|.+|++++ +++||+++.... +|+++...+....++.. . ....+.||++++. ++.||+++..
T Consensus 28 ~P~~~a~~p-dG~l~V~e~~gg-~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGP-DNQIWLTERATG-KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcC-CCcEEEEEcCCC-EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 478999998 678999998776 89999875333333321 1 1235569999986 8999999853
Q ss_pred -------CCeEEEEeCCCCC-----CEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC--------------------
Q psy5751 65 -------MDTISMANLNDDQ-----PKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR-------------------- 108 (232)
Q Consensus 65 -------~~~I~~~~~~g~~-----~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~-------------------- 108 (232)
..+|.+.+++... .++++. .....+.+|++++ +|.||++....
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~ 184 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQ 184 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCH
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccccccccccccccc
Confidence 3589988875432 344443 2345689999998 78999995431
Q ss_pred ----------CCCcEEEEeCCCC-----------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 109 ----------SGPKIEWSNLDGT-----------DREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 109 ----------~~~~I~~~~~~g~-----------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
..++|.|++.+|+ ..++.... +.+|.||++|+ .+.||++|.+.
T Consensus 185 ~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G--~RNp~gla~dp-~G~L~~~d~g~ 248 (454)
T 1cru_A 185 QELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG--HRNPQGLAFTP-NGKLLQSEQGP 248 (454)
T ss_dssp HHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC--CSEEEEEEECT-TSCEEEEEECS
T ss_pred ccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC--CCCcceEEECC-CCCEEEEecCC
Confidence 1478999999987 33444443 88999999999 59999998753
No 89
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.43 E-value=2.1e-10 Score=88.53 Aligned_cols=183 Identities=14% Similarity=0.090 Sum_probs=132.0
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~ 123 (232)
..+.||++|+.++.||.+....++|+.++++|...+.+.-....++.||+++. ++.+++++-. .++++.+.++....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~--~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDER--DYAIYVISLTPNSE 103 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETT--TTEEEEEEECTTCC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECC--CCcEEEEEcCCCCe
Confidence 68999999998899998666688999999997765555435667999999996 6777777644 46788777655442
Q ss_pred -EEEEEcC-CC-CCc-----ceEEEeCCCCEEEEEECCCC-cEEEEe--cCCCceEEEec-------CCCceEEEEEE--
Q psy5751 124 -EIFLKAA-DL-KLP-----NSLAVDFRTDELCWVDADSK-SLECMT--IRNRVRRKVYS-------NCTYPFGLSIT-- 183 (232)
Q Consensus 124 -~~~~~~~-~~-~~p-----~~l~~d~~~~~Ly~~d~~~~-~i~~~~--~~g~~~~~~~~-------~~~~p~gla~~-- 183 (232)
..+-... .+ ..| .||++|+.+++||.+..... .|+.++ +.+...+.+.. .+..+.+++++
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 2111111 02 234 79999999899999987665 788876 12222233211 34567899997
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCC------cceeEEEEEEcCC
Q psy5751 184 DEKYYWTDWKTNRIESANKEGERAPSIALDMMG------TTYMYGIAAVPSS 229 (232)
Q Consensus 184 ~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~------~~~p~gi~~~~~~ 229 (232)
.++||+....++.+..++.+|.....+.+.... ...|-|||+.+++
T Consensus 184 tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred CCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 689999999999999999999977766665321 3589999998865
No 90
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.42 E-value=1.1e-09 Score=84.31 Aligned_cols=188 Identities=12% Similarity=0.045 Sum_probs=130.7
Q ss_pred EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.|+.|+ ++.||.+.-..+ ++|.+++++.......+. ..-....|++++ ++.||.+....+.++++|.+......
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEE
Confidence 689998 579999975432 489999998655433332 222233667776 78999999999999999998766554
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc----CCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA----ADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~----~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
-+... ..+.+++-| ++.||.++. ..+|...+........-+.. ..+..+|.+... +++||......+.
T Consensus 122 ti~~~-~eG~glt~d--g~~L~~SdG---s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~ 193 (262)
T 3nol_A 122 SFNYD-GEGWGLTHN--DQYLIMSDG---TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNK 193 (262)
T ss_dssp EEECS-SCCCCEEEC--SSCEEECCS---SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSE
T ss_pred EEECC-CCceEEecC--CCEEEEECC---CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCe
Confidence 44422 356777766 899999983 46799998876543322221 114566777766 5899999999999
Q ss_pred EEEEecCCCceEEEe--cC-----------CCceEEEEEE--CCEEEEEeCCCCcEEEEeC
Q psy5751 157 LECMTIRNRVRRKVY--SN-----------CTYPFGLSIT--DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 157 i~~~~~~g~~~~~~~--~~-----------~~~p~gla~~--~~~ly~td~~~~~i~~~~~ 202 (232)
|.++|+..++..... +. ...|+|||++ +++||+|--.=.+++.+..
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 999999877664432 21 2367999997 6899999654455655543
No 91
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.41 E-value=4.5e-10 Score=91.45 Aligned_cols=223 Identities=6% Similarity=-0.019 Sum_probs=136.9
Q ss_pred eEEEEEeCCCCEEEEEEcC---------CCCcEEEEEcCCCcee-EEEeC-----CCCCccEEEEeecCCeEEEEeCC-C
Q psy5751 2 LIGITVDCVEGQVYYSSVA---------DKSSIKRAHLDGKNVE-DVITT-----NIRSPEGLTFDWVNRVLYWTDSQ-M 65 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~---------~~~~i~~~~~~g~~~~-~~~~~-----~~~~p~gl~~d~~~~~ly~~d~~-~ 65 (232)
| ++++++..+.||+++.. ++ .|..++....... ++-.. ....|.++++++.++.||+++.. .
T Consensus 53 p-~i~~spdg~~lyv~~~~~~~~~~g~~~~-~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 53 G-HVQVSNDGKKIYTMTTYHERITRGKRSD-VVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA 130 (361)
T ss_dssp E-EEEECTTSSEEEEEEEEETTSSSSCEEE-EEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS
T ss_pred C-ceEECCCCCEEEEEEecccccccCCCCC-EEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC
Confidence 5 89999999999999852 23 5888988754432 33222 12579999999999999999875 6
Q ss_pred CeEEEEeCCCCCCEEE-EeC---------CCCCceEEEEeCCCCeEEEEEcCCC--------------------------
Q psy5751 66 DTISMANLNDDQPKVI-VSK---------DLVNPRGIVVHPYYRKLFWSDWNRS-------------------------- 109 (232)
Q Consensus 66 ~~I~~~~~~g~~~~~~-~~~---------~~~~p~~iavd~~~~~ly~~d~~~~-------------------------- 109 (232)
+.|.++|.+....... +.. ....+.-+++.+.+..++|......
T Consensus 131 ~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (361)
T 2oiz_A 131 TSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALD 210 (361)
T ss_dssp EEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEEC
T ss_pred CeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEeccc
Confidence 7899998876532221 110 0011223455553333443321100
Q ss_pred ---------CCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEEC----------CCCcEEE
Q psy5751 110 ---------GPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDA----------DSKSLEC 159 (232)
Q Consensus 110 ---------~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~----------~~~~i~~ 159 (232)
.++++.+++.+....+.-... ....|.| ++++++++++|++.. ..+.|+.
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 122344444333222221100 0112454 999999999999864 1358999
Q ss_pred EecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 160 MTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 160 ~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+|+...+...-..... |.++++. +.+||.++. +.|..++..+..++.+..-...-..|.++++.+++
T Consensus 291 iD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 291 MDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 9998765433333333 9999995 678999986 88999988765445454411223479999998875
No 92
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=1.4e-10 Score=92.99 Aligned_cols=185 Identities=12% Similarity=0.042 Sum_probs=129.9
Q ss_pred eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEE
Q psy5751 35 VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIE 114 (232)
Q Consensus 35 ~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~ 114 (232)
.+.+.......+++.++++.++.|||++...+.|++++.++.....+ . ....+.+++.++ +|.+|++.. ..|+
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~-~~~~v~~i~~~~-dg~l~v~~~----~gl~ 112 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVH-A-LPFMGSALAKIS-DSKQLIASD----DGLF 112 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-E-CSSCEEEEEEEE-TTEEEEEET----TEEE
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-E-CCCcceEEEEeC-CCeEEEEEC----CCEE
Confidence 34445445567899999998899999999889999999987654433 2 224688999997 688888763 2499
Q ss_pred EEeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEECC------CCcEEEEecCCCceEEEecCCCceEEEEEE--
Q psy5751 115 WSNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDAD------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT-- 183 (232)
Q Consensus 115 ~~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-- 183 (232)
+++.++...+.+.... ....++++++|++ +++|+++.. .+.|++++ +| ..+.+......|.++++.
T Consensus 113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g-~~~~~~~~~~~~~~i~~s~d 189 (326)
T 2ghs_A 113 LRDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KG-KVTKLFADISIPNSICFSPD 189 (326)
T ss_dssp EEETTTCCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TT-EEEEEEEEESSEEEEEECTT
T ss_pred EEECCCCcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CC-cEEEeeCCCcccCCeEEcCC
Confidence 9998776665554321 0235789999997 678888753 46899998 54 444444555678999995
Q ss_pred CCEEEEEeCCCCcEEEEeCC--CC-Cc---ceEEeccCCcceeEEEEEEcCC
Q psy5751 184 DEKYYWTDWKTNRIESANKE--GE-RA---PSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 184 ~~~ly~td~~~~~i~~~~~~--g~-~~---~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+..||+++...+.|.+++.+ +. .. +.+.........|.|+++..++
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G 241 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG 241 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC
Confidence 44799999988999999975 22 22 2222111234578999987665
No 93
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.41 E-value=5.1e-10 Score=95.99 Aligned_cols=197 Identities=11% Similarity=-0.010 Sum_probs=142.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEc--CCCceeEEEeCCCCCccEEEEee----cCCeEEEEeCCCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHL--DGKNVEDVITTNIRSPEGLTFDW----VNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~--~g~~~~~~~~~~~~~p~gl~~d~----~~~~ly~~d~~~~~I~~~~~~g 75 (232)
+.++++++..+.||.++.. + .|..+++ ........+.. -..|.++++++ .++.||+++...+.|.++|...
T Consensus 181 ~~~v~~spdg~~l~v~~~d-~-~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD-A-RIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETT-S-EEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCC-C-eEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 5788999999999999977 6 8999999 43332223333 35799999998 8999999998788999999876
Q ss_pred CCCEEEEeC-----------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCC
Q psy5751 76 DQPKVIVSK-----------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFR 143 (232)
Q Consensus 76 ~~~~~~~~~-----------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~ 143 (232)
..+...+.. ....+.++++++.++.+|++... .++|..++..... ..+..... ...|.+++++++
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~--~g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spd 334 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE--TGKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSS 334 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT--TTEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTT
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC--CCeEEEEEecCCCcceeEEecc-CcCccCceECCC
Confidence 655444432 12257789999878888888754 6789999886543 22111122 567999999999
Q ss_pred CCEEEEEECCCCcEEEEecCCCceEEEecCC--Cce-EEEEE-E--CCEEEEEeC-CCCcEEEEeCCC
Q psy5751 144 TDELCWVDADSKSLECMTIRNRVRRKVYSNC--TYP-FGLSI-T--DEKYYWTDW-KTNRIESANKEG 204 (232)
Q Consensus 144 ~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~--~~p-~gla~-~--~~~ly~td~-~~~~i~~~~~~g 204 (232)
++++|++....+.|..++...++........ ++| .|..+ + .+.+|+|.. +.+.|..++.+.
T Consensus 335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 8889999988899999999876554433332 333 25554 3 378888875 568888888774
No 94
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.41 E-value=2e-11 Score=102.38 Aligned_cols=157 Identities=15% Similarity=0.193 Sum_probs=115.6
Q ss_pred EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--C------CCCCceEEEEeCC---CCeEEEEE
Q psy5751 37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--K------DLVNPRGIVVHPY---YRKLFWSD 105 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~------~~~~p~~iavd~~---~~~ly~~d 105 (232)
+++..++..|.+|++++ .++||+++...++|++++.++.....+.. . ....+.|||++|. ++.||++.
T Consensus 20 ~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 20 KVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 45556789999999999 56799999887789999875433333332 2 1234569999987 89999998
Q ss_pred cCC----------CCCcEEEEeCCCC-----CcEEEEEc---CCCCCcceEEEeCCCCEEEEEECC--------------
Q psy5751 106 WNR----------SGPKIEWSNLDGT-----DREIFLKA---ADLKLPNSLAVDFRTDELCWVDAD-------------- 153 (232)
Q Consensus 106 ~~~----------~~~~I~~~~~~g~-----~~~~~~~~---~~~~~p~~l~~d~~~~~Ly~~d~~-------------- 153 (232)
... ...+|.|..++.. ..++++.. ...+.+++|+++++ ++||++...
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd~~~~~~~~~~~~~~ 177 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGRNQLAYLFLPNQ 177 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTTTSGGGTTSCCC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECCCCCCCccccccccc
Confidence 530 0247888887543 23444431 12567899999997 789999431
Q ss_pred ------------------CCcEEEEecCCC-----------ceEEEecCCCceEEEEEE-CCEEEEEeCCCC
Q psy5751 154 ------------------SKSLECMTIRNR-----------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTN 195 (232)
Q Consensus 154 ------------------~~~i~~~~~~g~-----------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~ 195 (232)
.++|.|+++||+ ..+++...+..|.|++++ .+.||++|.+..
T Consensus 178 ~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 178 AQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp TTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECSS
T ss_pred cccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEecCCC
Confidence 368999999987 556778899999999997 689999997654
No 95
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.41 E-value=8.4e-10 Score=85.02 Aligned_cols=185 Identities=15% Similarity=0.071 Sum_probs=132.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.|+.|+ ++.||.+....+ +|.+++++.... .++ ...-....|++++ ++.||.+....+.++++|.+......-
T Consensus 58 qGL~~~--~~~Ly~stG~~g-~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQG-TLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEE--TTEEEEEETTTT-EEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ceEEEE--CCEEEEEcCCCC-EEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 688997 489999998888 899999986543 344 3332334667776 689999999999999999987665444
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
+.. ...+.|++-| ++.||.++. ..+|...+.......--+... .+..+|.|... +++||...+..+.|
T Consensus 132 i~~-~~eGwGLt~D--g~~L~vSdG---s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I 203 (268)
T 3nok_A 132 TRY-SGEGWGLCYW--NGKLVRSDG---GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDV 203 (268)
T ss_dssp EEC-SSCCCCEEEE--TTEEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred EeC-CCceeEEecC--CCEEEEECC---CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeE
Confidence 442 2456788877 899999983 467999988765433222211 24466777766 58999999899999
Q ss_pred EEEecCCCceEEEe--c------------CCCceEEEEEE--CCEEEEEeCCCCcEEEEe
Q psy5751 158 ECMTIRNRVRRKVY--S------------NCTYPFGLSIT--DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 158 ~~~~~~g~~~~~~~--~------------~~~~p~gla~~--~~~ly~td~~~~~i~~~~ 201 (232)
.++|+..++..... + ....|+|||++ .++||+|.-.=.+++.+.
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 99999877654332 2 11368999997 689999965434555554
No 96
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.39 E-value=7.3e-09 Score=79.04 Aligned_cols=189 Identities=13% Similarity=0.009 Sum_probs=131.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 2 LIGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
..|+.|+. +.||.+.-..+ ++|.++++........+. ..-....|++++ ++.||.+....+.++++|.+.....
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 35899986 89999976542 489999998665433332 222334666666 7999999999999999999876654
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
..+... ..+.+++-| ++.||.++. ..+|...+........-+... .+..+|.|... +++||...+..+
T Consensus 99 ~ti~~~-~~Gwglt~d--g~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~ 170 (243)
T 3mbr_X 99 ARFRYP-GEGWALTSD--DSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTS 170 (243)
T ss_dssp EEEECS-SCCCEEEEC--SSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTT
T ss_pred EEEeCC-CCceEEeeC--CCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCC
Confidence 444422 367777766 899999983 467999988765443222211 13456666655 689999998999
Q ss_pred cEEEEecCCCceEEEe--cC------------CCceEEEEEE--CCEEEEEeCCCCcEEEEeC
Q psy5751 156 SLECMTIRNRVRRKVY--SN------------CTYPFGLSIT--DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~--~~------------~~~p~gla~~--~~~ly~td~~~~~i~~~~~ 202 (232)
.|.++|+..++..... +. ...|+|||++ .++||+|--.=.+++.+..
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 9999999877664432 21 1357999997 6899999654456666554
No 97
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.39 E-value=6.7e-10 Score=91.76 Aligned_cols=195 Identities=16% Similarity=0.171 Sum_probs=144.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC-------CCCeEEEEeCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS-------QMDTISMANLN 74 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~-------~~~~I~~~~~~ 74 (232)
+.+++|++..+.||++...++ .|..+++........+.. ...+.++++++.++.||.+.. ..+.|.+.++.
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISE-DISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTT-EEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEecCCC-cEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 568999998899999987777 899999986554333332 356899999998888988874 35689999987
Q ss_pred CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
......... ....|.+++++|.++.||++... .++|...+++.......+.. ...|.++++++++..||++....
T Consensus 292 ~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 292 KEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMC--CSKIEVYDLKEKKVQKSIPV--FDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp TTEEEEEEE-EEECEEEEEECSSTTEEEEEETT--TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEECCC
T ss_pred CCcEEeecc-CCCCcceEEECCCCCEEEEEecC--CCEEEEEECCCCcEEEEecC--CCCCCeEEEcCCCCEEEEEecCC
Confidence 654433332 22378899999977789998765 56799999886544433333 56789999999988999998753
Q ss_pred --------------CcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 155 --------------KSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 155 --------------~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
+.|..+++...+..........|.++++. +..|+++....+.|...+.+
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 48999999876554444455678899984 56788888777888777654
No 98
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.37 E-value=5.2e-11 Score=98.72 Aligned_cols=207 Identities=11% Similarity=-0.015 Sum_probs=130.6
Q ss_pred CeEEEEEeCCCCEEEEEEc---------CCCCcEEEEEcCCCceeE-EEeC-C-----CCCccEEEEeecCCeEEEEeCC
Q psy5751 1 MLIGITVDCVEGQVYYSSV---------ADKSSIKRAHLDGKNVED-VITT-N-----IRSPEGLTFDWVNRVLYWTDSQ 64 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~---------~~~~~i~~~~~~g~~~~~-~~~~-~-----~~~p~gl~~d~~~~~ly~~d~~ 64 (232)
.| ++.+++..++||+++. ..+ .|..++........ +... . ...|.++++++.++.||+++..
T Consensus 120 ~P-gia~SpDgk~lyVan~~~~~~~~G~~~~-~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~ 197 (426)
T 3c75_H 120 LP-HPVAAEDGSFFAQASTVFERIARGKRTD-YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS 197 (426)
T ss_dssp SC-EEEECTTSSCEEEEEEEEEETTEEEEEE-EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred CC-ceEECCCCCEEEEEeccccccccCCCCC-EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence 37 8999999999999996 244 79999988655433 3222 0 2579999999999999999875
Q ss_pred -CCeEEEEeCCCCCCEEEEeC-C--CCCceE----EEEeCCCCeEEEEEcCCC---------------------------
Q psy5751 65 -MDTISMANLNDDQPKVIVSK-D--LVNPRG----IVVHPYYRKLFWSDWNRS--------------------------- 109 (232)
Q Consensus 65 -~~~I~~~~~~g~~~~~~~~~-~--~~~p~~----iavd~~~~~ly~~d~~~~--------------------------- 109 (232)
.+.|.++|+........+.. . ...|.+ +++.+ .|.+.|.+....
T Consensus 198 ~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~-dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 198 PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCR-DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET-TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcC-CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 68899999877654322221 1 011222 45554 333333332100
Q ss_pred --------CCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEECC---------CCcEEEEe
Q psy5751 110 --------GPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDAD---------SKSLECMT 161 (232)
Q Consensus 110 --------~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~~---------~~~i~~~~ 161 (232)
.++++.+++.+....++-... ....|.+ +++++++++||+++.. .+.|+.+|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 122334443332222111000 0012555 8999999999999742 35799999
Q ss_pred cCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCCC-CCcceE
Q psy5751 162 IRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKEG-ERAPSI 210 (232)
Q Consensus 162 ~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~g-~~~~~i 210 (232)
....++..-......|+++++. +. ++|++++.++.|..++... +..+.+
T Consensus 357 ~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9876653333333469999994 56 8999999999999999874 444444
No 99
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.37 E-value=1.2e-09 Score=83.32 Aligned_cols=175 Identities=15% Similarity=0.126 Sum_probs=122.5
Q ss_pred CCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
..-.||.++. +.||.+.... ..|.++|+.......... .......|++++ +++||...|. .+++++++.+.
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~--~~~v~v~D~~t 94 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWR--NHEGFVYDLAT 94 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS--SSEEEEEETTT
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEee--CCEEEEEECCc
Confidence 3456999995 8999997654 589999998766544333 222233566666 8999999987 57899998875
Q ss_pred CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ec----CCCceEEEEEECCEEEEEeCCC
Q psy5751 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YS----NCTYPFGLSITDEKYYWTDWKT 194 (232)
Q Consensus 121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~----~~~~p~gla~~~~~ly~td~~~ 194 (232)
.....-+... ..+.||+ .++++||.+| +.++|+.+|+...+. ..+ .. ....++.+.+.+++||...|.+
T Consensus 95 l~~~~ti~~~--~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s 169 (243)
T 3mbr_X 95 LTPRARFRYP--GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT 169 (243)
T ss_dssp TEEEEEEECS--SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTT
T ss_pred CcEEEEEeCC--CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCC
Confidence 5443333332 2445555 5568999998 488999999987544 233 21 2244567888899999999999
Q ss_pred CcEEEEeCC-CCCcceEEeccC----------CcceeEEEEEEcCC
Q psy5751 195 NRIESANKE-GERAPSIALDMM----------GTTYMYGIAAVPSS 229 (232)
Q Consensus 195 ~~i~~~~~~-g~~~~~i~~~~~----------~~~~p~gi~~~~~~ 229 (232)
+.|.++++. |.....+.+... ....|-|||..++.
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence 999999998 566667775521 12368999988753
No 100
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.36 E-value=1e-09 Score=87.17 Aligned_cols=200 Identities=11% Similarity=-0.024 Sum_probs=136.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-----CCccEEEEeecCCeEEEEeC-----------CC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-----RSPEGLTFDWVNRVLYWTDS-----------QM 65 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-----~~p~gl~~d~~~~~ly~~d~-----------~~ 65 (232)
|.++++++..+.+|+++...+ .|..+++........+.... ..|.++++++.++.||+++. ..
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSE-SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTT-EEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred ccceEEcCCCCEEEEEeCCCC-eEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 567899998889999998777 89999997655433333211 27899999998889999962 34
Q ss_pred CeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-----------------
Q psy5751 66 DTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----------------- 128 (232)
Q Consensus 66 ~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----------------- 128 (232)
+.|.++++++......+. ....|.+++++|.++.||+++ +.|+..++.+......+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 188 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLG-----RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188 (337)
T ss_dssp CEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEES-----SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred ceEEEEECCCCcEEEEEe-CCCCcceeEECCCCCEEEEeC-----CeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence 789999997765444444 245688999999777788873 235555543221111000
Q ss_pred ------------------------------------------------cCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 129 ------------------------------------------------AADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 129 ------------------------------------------------~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
......|.+++++++++.||++ .+.|..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~ 265 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESF 265 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEE
Confidence 0001356679999998899988 4789999
Q ss_pred ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIAL 212 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~~ 212 (232)
+++..+..........|.++++. +..||++ ...+.|..++.. ++....+..
T Consensus 266 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 266 DLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp ETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCCEEEEEEC
T ss_pred ECCCCcCcceecCCCceeeEEECCCCCEEEEE-cCCCcEEEEECcCCcEEEEEEc
Confidence 99876554444445678899985 4578887 446889999987 444445544
No 101
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.34 E-value=4.3e-10 Score=86.62 Aligned_cols=171 Identities=15% Similarity=0.125 Sum_probs=122.8
Q ss_pred cEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEE
Q psy5751 47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREI 125 (232)
Q Consensus 47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~ 125 (232)
.||.++ ++.||.+....++|.++|+.... ...++. .-....|++++ +++||.+.|. .+++++++.+......
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~-~~~FgeGit~~--g~~Ly~ltw~--~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERL-GNIFAEGLASD--GERLYQLTWT--EGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEEC-TTCCEEEEEEC--SSCEEEEESS--SCEEEEEETTTTEEEE
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECC-CCcceeEEEEe--CCEEEEEEcc--CCEEEEEECCcCcEEE
Confidence 799998 68999999998999999987655 344432 22123457776 8999999987 5789999887554433
Q ss_pred EEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ec----CCCceEEEEEECCEEEEEeCCCCcEEE
Q psy5751 126 FLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YS----NCTYPFGLSITDEKYYWTDWKTNRIES 199 (232)
Q Consensus 126 ~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~----~~~~p~gla~~~~~ly~td~~~~~i~~ 199 (232)
-+.. -..+.||+-| +++||.+| +.++|..+|+...+. ..+ +. ....++.|++.++.||...|.++.|.+
T Consensus 131 ti~~--~~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 131 TTRY--SGEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEEC--SSCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred EEeC--CCceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEE
Confidence 3333 2345677755 58999998 588999999987544 223 21 234557888889999999999999999
Q ss_pred EeCC-CCCcceEEeccC----------CcceeEEEEEEcCC
Q psy5751 200 ANKE-GERAPSIALDMM----------GTTYMYGIAAVPSS 229 (232)
Q Consensus 200 ~~~~-g~~~~~i~~~~~----------~~~~p~gi~~~~~~ 229 (232)
+++. |+....|.+... ....|-|||..++.
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence 9997 566667776421 12368999988653
No 102
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.34 E-value=8.3e-10 Score=85.00 Aligned_cols=174 Identities=16% Similarity=0.130 Sum_probs=122.5
Q ss_pred CCc--cEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCCCc--eEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751 44 RSP--EGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLVNP--RGIVVHPYYRKLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 44 ~~p--~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~p--~~iavd~~~~~ly~~d~~~~~~~I~~~~ 117 (232)
..+ .||.++ ++.||.+.... ..|.++|+.......... -...+ .|++++ +++||.+.|. .+++.+++
T Consensus 41 ~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~~~FgeGit~~--g~~ly~ltw~--~~~v~v~D 113 (262)
T 3nol_A 41 TKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGKRYFGEGISDW--KDKIVGLTWK--NGLGFVWN 113 (262)
T ss_dssp TTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCTTCCEEEEEEE--TTEEEEEESS--SSEEEEEE
T ss_pred CCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCCccceeEEEEe--CCEEEEEEee--CCEEEEEE
Confidence 455 899998 57999987654 489999998766443333 12344 456776 8999999987 57899999
Q ss_pred CCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecC----CCceEEEEEECCEEEEEe
Q psy5751 118 LDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSN----CTYPFGLSITDEKYYWTD 191 (232)
Q Consensus 118 ~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~----~~~p~gla~~~~~ly~td 191 (232)
.+......-+... ..+.|++. ++++||.+|. .++|+.+|+...+. ..+ +.. ...++.+++.++.||+..
T Consensus 114 ~~t~~~~~ti~~~--~eG~glt~--dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~ 188 (262)
T 3nol_A 114 IRNLRQVRSFNYD--GEGWGLTH--NDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV 188 (262)
T ss_dssp TTTCCEEEEEECS--SCCCCEEE--CSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CccCcEEEEEECC--CCceEEec--CCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence 8766544444432 24456654 4689999984 78999999986543 333 222 244556888899999999
Q ss_pred CCCCcEEEEeCC-CCCcceEEeccCC---------cceeEEEEEEcCC
Q psy5751 192 WKTNRIESANKE-GERAPSIALDMMG---------TTYMYGIAAVPSS 229 (232)
Q Consensus 192 ~~~~~i~~~~~~-g~~~~~i~~~~~~---------~~~p~gi~~~~~~ 229 (232)
|.++.|.++++. |+....|...... ...|-|||..++.
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 999999999997 5666677764211 2368999998753
No 103
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.33 E-value=1.8e-10 Score=91.51 Aligned_cols=179 Identities=11% Similarity=-0.022 Sum_probs=125.3
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC-------CceEEEE---eCCCCeEEEE-EcC---
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV-------NPRGIVV---HPYYRKLFWS-DWN--- 107 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-------~p~~iav---d~~~~~ly~~-d~~--- 107 (232)
.--.|++++.|...+.+|+++..++.|.+++.++.....+.-.... .+.||.+ |+. ++|+++ +.+
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccc
Confidence 3458999999998999999999999999999986654444222322 5689999 784 888884 420
Q ss_pred -------CCCCcEEEEeCC----CCCcEEEEEcC-----------CCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCC
Q psy5751 108 -------RSGPKIEWSNLD----GTDREIFLKAA-----------DLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRN 164 (232)
Q Consensus 108 -------~~~~~I~~~~~~----g~~~~~~~~~~-----------~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g 164 (232)
.....+.+++++ +.....+-... ....++++++|+. |..|++++.. +.|++++++|
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESSCEEEEECTTS
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCCCCCeEEEEeCCC
Confidence 014678999998 44433322110 1235899999997 9999999998 9999999999
Q ss_pred CceEEEecC------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEec--c--CCcceeEEE
Q psy5751 165 RVRRKVYSN------CTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALD--M--MGTTYMYGI 223 (232)
Q Consensus 165 ~~~~~~~~~------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~--~--~~~~~p~gi 223 (232)
.....+... ...+.||++. +..|++++. .+++.+++........+... . .....|.||
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgi 238 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKI 238 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccc
Confidence 866655322 2336799996 557888888 89999999883222124332 1 124467775
No 104
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.32 E-value=1.3e-09 Score=85.38 Aligned_cols=210 Identities=6% Similarity=-0.056 Sum_probs=144.5
Q ss_pred CCEEEEEEcCCCCcEEEEEc-CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCc
Q psy5751 11 EGQVYYSSVADKSSIKRAHL-DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNP 89 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 89 (232)
.+.+++++..++ +|+.++. +|....++-......+.++++.+. +++|++ ..+.|+.++.+|+..-.+-......+
T Consensus 4 ~~~~lv~~~~~~-~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWN-KIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILFS--YSKGAKMITRDGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCS-EEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEEE--CBSEEEEECTTSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCC-EEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEEe--CCCCEEEECCCCCEEEEEcCCCCccc
Confidence 467888887777 8999998 555444443332247899999984 556664 35689999997765443332222345
Q ss_pred eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
.+.+..+ +|.+++++... ..+++.++.+|.....+.... ....|.+++++++ +.+++++...++|..++.+|.
T Consensus 80 ~~~~~~~-dG~~lv~~~~~-~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPNGQ 156 (276)
T ss_dssp EEEEECT-TSCEEEEEEST-TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTTSC
T ss_pred cccEECC-CCCEEEEecCC-CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEecCCCEEEEECCCCC
Confidence 6777876 77888887641 457888888887654443221 1235778888886 667789999999999999965
Q ss_pred ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEecc---CCcceeEEEEEEcC
Q psy5751 166 VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDM---MGTTYMYGIAAVPS 228 (232)
Q Consensus 166 ~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~---~~~~~p~gi~~~~~ 228 (232)
..-.+ .....|.++++. ++.+++++..+++|..++++ |+.+..+.... ..+..|.++++.++
T Consensus 157 ~~w~~-~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 157 LLNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp EEEEE-ECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT
T ss_pred EEEEE-ECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC
Confidence 44433 233568888875 78899999988999999999 88877775332 12456888877654
No 105
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.27 E-value=3.1e-09 Score=91.15 Aligned_cols=192 Identities=9% Similarity=0.045 Sum_probs=139.8
Q ss_pred EeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC--CCCCCEEEEeC
Q psy5751 7 VDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL--NDDQPKVIVSK 84 (232)
Q Consensus 7 ~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~--~g~~~~~~~~~ 84 (232)
+++ ++.+|+++..++ .|..++.........+..+. .+.++++++.++.||.++.. +.|.++|+ ........+.
T Consensus 145 ~~p-~~~~~vs~~~d~-~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~- 219 (543)
T 1nir_A 145 LDL-PNLFSVTLRDAG-QIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIK- 219 (543)
T ss_dssp CCG-GGEEEEEEGGGT-EEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEE-
T ss_pred cCC-CCEEEEEEcCCC-eEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEe-
Confidence 455 678999998888 99999988655444444332 48999999999999999987 89999999 3332222233
Q ss_pred CCCCceEEEEeC----CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----------CCCCcceEEEeCCCCEEEEE
Q psy5751 85 DLVNPRGIVVHP----YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----------DLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 85 ~~~~p~~iavd~----~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----------~~~~p~~l~~d~~~~~Ly~~ 150 (232)
....|++++++| .+++||++... .+.|..++.........+... ....+.+++++++++.+|++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 456799999999 89999998854 356777776654433333220 01256789999988999999
Q ss_pred ECCCCcEEEEecCCCceEE--EecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCC
Q psy5751 151 DADSKSLECMTIRNRVRRK--VYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 151 d~~~~~i~~~~~~g~~~~~--~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~ 205 (232)
....++|+.+++...+... .......|.+++++ +.++|++...++.|..++....
T Consensus 298 ~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp ETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 9999999999997543211 12345668888985 5578999988899999998743
No 106
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.27 E-value=2.7e-09 Score=84.75 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=106.2
Q ss_pred EEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-C-CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCC---
Q psy5751 13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNI-R-SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDL--- 86 (232)
Q Consensus 13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-~-~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~--- 86 (232)
.++++...++ .|..+++........+...- . .|.++++++.++.+|++....+.|.++++.+......+. ...
T Consensus 2 ~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPD-KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTT-EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCC-eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 3566666666 78888887654433333221 1 589999999888999999888999999987765443333 211
Q ss_pred -CCceEEEEeCCCCeEEEEEcC-------C--CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 87 -VNPRGIVVHPYYRKLFWSDWN-------R--SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 87 -~~p~~iavd~~~~~ly~~d~~-------~--~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
..|.+++++|.++.||++... . ..+.|...++++......+.. ...|.++++++++++||++ .+.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~---~~~ 155 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL---GRD 155 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE---SSS
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe---CCe
Confidence 268899999977799998621 0 136799999876544333333 4578999999998889999 467
Q ss_pred EEEEecCCCceE
Q psy5751 157 LECMTIRNRVRR 168 (232)
Q Consensus 157 i~~~~~~g~~~~ 168 (232)
|..+++++.+..
T Consensus 156 i~~~d~~~~~~~ 167 (337)
T 1pby_B 156 LHVMDPEAGTLV 167 (337)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEe
Confidence 999999876543
No 107
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.26 E-value=6.1e-10 Score=90.74 Aligned_cols=212 Identities=8% Similarity=-0.059 Sum_probs=135.2
Q ss_pred eEEEEEeCCCCEEEEEEc---------CCCCcEEEEEcCCCceeEEEeCC-------CCCccEEEEeecCCeEEEEeCC-
Q psy5751 2 LIGITVDCVEGQVYYSSV---------ADKSSIKRAHLDGKNVEDVITTN-------IRSPEGLTFDWVNRVLYWTDSQ- 64 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~---------~~~~~i~~~~~~g~~~~~~~~~~-------~~~p~gl~~d~~~~~ly~~d~~- 64 (232)
| ++.+++..+.||+++. .++ .|..+++........+..+ ...|.++++++.++.||+++..
T Consensus 68 P-~i~~spDg~~lyVan~~~~r~~~G~~~~-~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 68 S-LAVAGHSGSDFALASTSFARSAKGKRTD-YVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp C-EEEECTTSSCEEEEEEEETTTTSSSEEE-EEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred C-ceEECCCCCEEEEEcccccccccCCCCC-EEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 6 8999999999999984 234 7999999876543333211 2579999999999999999875
Q ss_pred CCeEEE--EeCCCCCCEEE---------------------------Ee-CC------------------CCCceEEEEeC
Q psy5751 65 MDTISM--ANLNDDQPKVI---------------------------VS-KD------------------LVNPRGIVVHP 96 (232)
Q Consensus 65 ~~~I~~--~~~~g~~~~~~---------------------------~~-~~------------------~~~p~~iavd~ 96 (232)
.+.+.+ +|... ...+ +. .. ...|. + .+
T Consensus 146 ~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~ 220 (368)
T 1mda_H 146 SAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-AN 220 (368)
T ss_dssp SCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ET
T ss_pred CCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cc
Confidence 466777 55533 1111 10 00 01122 2 33
Q ss_pred CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEEC---C-----CCcE
Q psy5751 97 YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDA---D-----SKSL 157 (232)
Q Consensus 97 ~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~---~-----~~~i 157 (232)
..+.+||+.. +.+..++..+...+++..-. ....|.+ +++++++++||++.. + .+.+
T Consensus 221 ~~~~~~~vs~----~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 221 YPGMLVWAVA----SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp TTTEEEECBS----SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred cCCEEEEEcC----CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 4555666553 34777777654433322111 0224555 899999999999865 3 3456
Q ss_pred EEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC-CCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW-KTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~-~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
..+|+...++..-......|+||++. +.++|++.. .++.|..++... +..+.+. ....|.||++.+.
T Consensus 297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~----vg~~P~~i~~~~~ 367 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE----LDKGPESLSVQNE 367 (368)
T ss_dssp EEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC----CCSCCCEEECCCC
T ss_pred EEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE----CCCCCCEEEeecC
Confidence 68888765442222233479999995 446999988 699999999874 3333332 2457899987653
No 108
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.26 E-value=1.4e-09 Score=88.39 Aligned_cols=182 Identities=15% Similarity=0.095 Sum_probs=117.3
Q ss_pred cEEEEEcC--CCceeEEEe---CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCCCEEE--Ee-C-CCCCceEEE
Q psy5751 24 SIKRAHLD--GKNVEDVIT---TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQPKVI--VS-K-DLVNPRGIV 93 (232)
Q Consensus 24 ~i~~~~~~--g~~~~~~~~---~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~--~~-~-~~~~p~~ia 93 (232)
.+..++++ |.....+.. .....|.++++++.++.||+++...+.|.+++++ ......+ +. . ....|++++
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 66666665 432222211 1346899999999888999999888899999987 3332222 22 1 256799999
Q ss_pred EeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEE---EEEc-C-CC---C-------CcceEE-EeCCCCEEEEEECCCC
Q psy5751 94 VHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREI---FLKA-A-DL---K-------LPNSLA-VDFRTDELCWVDADSK 155 (232)
Q Consensus 94 vd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~---~~~~-~-~~---~-------~p~~l~-~d~~~~~Ly~~d~~~~ 155 (232)
++|.+++||++... .+.|...+++. ..... .+.. . .. . .|.+++ +++++++||+++...+
T Consensus 200 ~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 200 MHPTGNYLYALMEA--GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp ECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred ECCCCCEEEEEECC--CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 99977799998754 34566655542 22211 1111 1 01 1 488999 9999889999986554
Q ss_pred -----cEEEEecC-CCceEEE---ec-CCCceEEEEE-----ECCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751 156 -----SLECMTIR-NRVRRKV---YS-NCTYPFGLSI-----TDEKYYWTDWKTNRIESANKEGERA 207 (232)
Q Consensus 156 -----~i~~~~~~-g~~~~~~---~~-~~~~p~gla~-----~~~~ly~td~~~~~i~~~~~~g~~~ 207 (232)
.|..++++ .+..+.+ .. ....|.++++ ++.+||+++..++.|..++.++..+
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 77777764 3333321 21 3345667776 3678999998888888888776533
No 109
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.23 E-value=7.3e-09 Score=82.70 Aligned_cols=200 Identities=13% Similarity=-0.013 Sum_probs=132.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------CCCccEEEEeecCCeEEEEeCC-----------
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------IRSPEGLTFDWVNRVLYWTDSQ----------- 64 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------~~~p~gl~~d~~~~~ly~~d~~----------- 64 (232)
|.++++++..+.+|+++..++ .|+.++++.......+... ...|.++++++.++.||++...
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~-~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYG-DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CceeEECCCCCEEEEEeCCCC-cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 567889997788999987777 8999999865543333321 2348999999988999998854
Q ss_pred CCeEEEEeCCCCC---CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC----------
Q psy5751 65 MDTISMANLNDDQ---PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD---------- 131 (232)
Q Consensus 65 ~~~I~~~~~~g~~---~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~---------- 131 (232)
.+.|.++++.... ...... ....+.+++++|.+ .+|++.. .|+.+++........+....
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg-~l~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG-SLYVAGP-----DIYKMDVKTGKYTVALPLRNWNRKGYSAPD 196 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS-CEEEESS-----SEEEECTTTCCEEEEECSTTCCCTTBCCCB
T ss_pred CCeEEEEECCCccccceeeecc-CCCcccceeECCCC-cEEEccC-----cEEEEeCCCCceeccccccccCCccccCcc
Confidence 5789999987622 222233 22357889999854 4877532 27777765443222221110
Q ss_pred ---------------------------------------------------------CCCcceEEEeC-CCCEEEEEECC
Q psy5751 132 ---------------------------------------------------------LKLPNSLAVDF-RTDELCWVDAD 153 (232)
Q Consensus 132 ---------------------------------------------------------~~~p~~l~~d~-~~~~Ly~~d~~ 153 (232)
...|.++++++ +++.||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--- 273 (349)
T 1jmx_B 197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--- 273 (349)
T ss_dssp CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---
T ss_pred ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---
Confidence 11455677778 88889888
Q ss_pred CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEEec
Q psy5751 154 SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIALD 213 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~ 213 (232)
.++|..++++..+..........|.++++. ++.||++ ...+.|..++.. ++....+..+
T Consensus 274 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTTEEEEEEECS
T ss_pred cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe-cCCCeEEEEeccccceeeeeecC
Confidence 678999999876654444444568889985 4578886 445889999986 4444555543
No 110
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.22 E-value=2.9e-09 Score=88.27 Aligned_cols=212 Identities=13% Similarity=0.093 Sum_probs=133.0
Q ss_pred CCCEEEEEEcCC----CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCC
Q psy5751 10 VEGQVYYSSVAD----KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDD 76 (232)
Q Consensus 10 ~~~~ly~~d~~~----~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~ 76 (232)
..+++|+++... + .|.++++........+..+ ..| ++++++.++.||+++. ..+.|.++|....
T Consensus 83 ~~~~vyV~n~~~~~~~~-~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 83 DARRVYIQDPAHFAAIT-QQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CTTEEEEEECTTTCSSE-EEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCEEEEECCCcCCCCC-eEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 457899999865 5 8999999876654445444 468 9999999999999985 3567999998776
Q ss_pred CCEEEEe-C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC--CCCcce----EEE---
Q psy5751 77 QPKVIVS-K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD--LKLPNS----LAV--- 140 (232)
Q Consensus 77 ~~~~~~~-~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~--~~~p~~----l~~--- 140 (232)
.....+. . ....|.+++++|.+++||+++... .+.|..+++......--+.... ...|.+ +++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~-~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP-APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC-CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCC
Confidence 6433222 1 135799999999999999998541 3568788776543221111100 001112 333
Q ss_pred ----------------------------------eCCCCEEEEEECCCCcEEEEecCCCceEEEec----------CCCc
Q psy5751 141 ----------------------------------DFRTDELCWVDADSKSLECMTIRNRVRRKVYS----------NCTY 176 (232)
Q Consensus 141 ----------------------------------d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----------~~~~ 176 (232)
+++.+++|++.. .+.++.++..+.....+.. ....
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 344444444432 3456666665543332211 0112
Q ss_pred eEE---EEEE--CCEEEEEeC---------CCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 177 PFG---LSIT--DEKYYWTDW---------KTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 177 p~g---la~~--~~~ly~td~---------~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
|.| ++++ +++||+++. .++.|..++... +....+.. ...|.+|++.+++-
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~ 382 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAE 382 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSS
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCC
Confidence 444 6664 689999974 245799999874 44445543 33799999988754
No 111
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=3.1e-08 Score=85.21 Aligned_cols=198 Identities=9% Similarity=0.016 Sum_probs=138.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEEeCCCCCccEEEEe----ecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVITTNIRSPEGLTFD----WVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~~~~~~~p~gl~~d----~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
|.++.+++..+.||+++. ++ .|..+++. .......+..+ ..|.+++++ +.++.+|++++..+.+.++|...
T Consensus 199 p~~v~~SpDGr~lyv~~~-dg-~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGR-DG-KVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEEECTTSCEEEEEET-TS-EEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ccceEECCCCCEEEEEcC-CC-eEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 678999998899999884 45 79999994 22222223333 579999999 58899999999999999999776
Q ss_pred CCCEEEEeCC-----------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751 76 DQPKVIVSKD-----------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 76 ~~~~~~~~~~-----------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~ 144 (232)
......+... ..++.+++..+....++++.. +.++|..++........+........|.++.+++++
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~--~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK--ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 353 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET--TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec--CCCeEEEEecCCCccceeeeeeccccccCceECCCC
Confidence 5544433311 124567888775555555553 467899998865532222221114578899999999
Q ss_pred CEEEEEECCCCcEEEEecCCCceEEEec---CCCce-EEEEE-E--CCEEEEEe-CCCCcEEEEeCCC
Q psy5751 145 DELCWVDADSKSLECMTIRNRVRRKVYS---NCTYP-FGLSI-T--DEKYYWTD-WKTNRIESANKEG 204 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---~~~~p-~gla~-~--~~~ly~td-~~~~~i~~~~~~g 204 (232)
.++|+++...++|..+|....+...... ...+| .|..+ + .+.+|+|. .+++.|..++.+.
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 9999999999999999998765433333 33444 36665 3 36777764 4668999999875
No 112
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.22 E-value=3.1e-09 Score=86.82 Aligned_cols=215 Identities=10% Similarity=0.095 Sum_probs=132.3
Q ss_pred eEEEEEeCCCCEEEEEEcC-CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVA-DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~-~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
|.++.+++..++||+++.. .+ .|..+++........+.. .... ..... +...|++....+++..++++......
T Consensus 139 P~~~a~spDGk~lyVan~~~~~-~VsVID~~t~~vv~tI~v--~g~~-~~~P~-g~~~~~~~~~DG~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAP-AVGVVDLEGKAFKRMLDV--PDCY-HIFPT-APDTFFMHCRDGSLAKVAFGTEGTPE 213 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSC-EEEEEETTTTEEEEEEEC--CSEE-EEEEE-ETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred CceEEEcCCCCEEEEEEcCCCC-eEEEEECCCCcEEEEEEC--CCcc-eeecC-CCceeEEECCCCCEEEEECCCCCeEE
Confidence 4568999999999999975 56 899999987665444432 1222 22222 33344455555666666665422111
Q ss_pred EEeCCC----CCceE--EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcc---eEEEeCC
Q psy5751 81 IVSKDL----VNPRG--IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPN---SLAVDFR 143 (232)
Q Consensus 81 ~~~~~~----~~p~~--iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~---~l~~d~~ 143 (232)
...... ..|.. .+++...|+++|... .++++.+++.+...+++-... .-..|. .++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~---~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 214 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY---TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp EEECCCCSCTTSCBCSCCEEETTTTEEEEEBT---TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred EeecceeccccccccccceeEcCCCcEEEEeC---CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence 111111 12222 355555787766554 357999999877654432110 011233 3888999
Q ss_pred CCEEEEEEC---------CCCcEEEEecCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751 144 TDELCWVDA---------DSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKE-GERAPSI 210 (232)
Q Consensus 144 ~~~Ly~~d~---------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~-g~~~~~i 210 (232)
.++||++.. ..++|+.+|+...++..-......|++|++. +. .||.+++.++.|..++.. ++..+.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 999999964 2368999999877654333333478899994 33 799999999999999986 5555555
Q ss_pred EeccCCcceeEEEEEEcC
Q psy5751 211 ALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 211 ~~~~~~~~~p~gi~~~~~ 228 (232)
.. +.+|-.+++..+
T Consensus 371 ~~----~~~p~~l~~s~d 384 (386)
T 3sjl_D 371 NQ----LGHGPQVITTAD 384 (386)
T ss_dssp CC----CCSSCCEEEECC
T ss_pred cC----CCCCceeEECCc
Confidence 43 445666665544
No 113
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.21 E-value=1.4e-08 Score=80.96 Aligned_cols=156 Identities=8% Similarity=0.014 Sum_probs=107.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
|+++.. ++.+|+++..++ .|+.+++........+.. ....|.++++++.++.+|++....+.|.++++++......+
T Consensus 4 g~~~~~-~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPN-NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCT-TCEEEEEEETTT-EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccC-CCEEEEEeCCCC-eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 455554 788999998888 999999986554333332 22268999999988889999988899999999865544333
Q ss_pred e-CC-----CCCceEEEEeCCCCeEEEEEcC---------CCCCcEEEEeCCCCC---cEEEEEcCCCCCcceEEEeCCC
Q psy5751 83 S-KD-----LVNPRGIVVHPYYRKLFWSDWN---------RSGPKIEWSNLDGTD---REIFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 83 ~-~~-----~~~p~~iavd~~~~~ly~~d~~---------~~~~~I~~~~~~g~~---~~~~~~~~~~~~p~~l~~d~~~ 144 (232)
. .. ...|.+++++|.++.||++... ...+.|...++.... ....... -..+.++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTS
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCC
Confidence 3 11 2348899999988889988732 113578888887522 1122222 2367899999986
Q ss_pred CEEEEEECCCCcEEEEecCCCce
Q psy5751 145 DELCWVDADSKSLECMTIRNRVR 167 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g~~~ 167 (232)
. ||++. +.|..+++...+.
T Consensus 160 ~-l~~~~---~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 160 S-LYVAG---PDIYKMDVKTGKY 178 (349)
T ss_dssp C-EEEES---SSEEEECTTTCCE
T ss_pred c-EEEcc---CcEEEEeCCCCce
Confidence 5 88863 3488888765543
No 114
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.18 E-value=7.1e-08 Score=78.39 Aligned_cols=190 Identities=13% Similarity=0.158 Sum_probs=133.1
Q ss_pred eEEEEEeCCCCEEEEEEcCC------------C--CcEEEEEcCCC--ceeEEE-eC-----CCCCccEEEEeec-----
Q psy5751 2 LIGITVDCVEGQVYYSSVAD------------K--SSIKRAHLDGK--NVEDVI-TT-----NIRSPEGLTFDWV----- 54 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~------------~--~~i~~~~~~g~--~~~~~~-~~-----~~~~p~gl~~d~~----- 54 (232)
+.++.+|. .++||+.|.+. . ++|..+++... ..-+.+ .+ .-....+|++|..
T Consensus 89 V~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 89 IYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp EEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred eeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 56889997 89999999761 1 47889999876 432222 11 1234678999922
Q ss_pred --CCeEEEEeCCCCeEEEEeCCCCCCEEEEe----CC--------------CCCceEEEEeCC----CCeEEEEEcCCCC
Q psy5751 55 --NRVLYWTDSQMDTISMANLNDDQPKVIVS----KD--------------LVNPRGIVVHPY----YRKLFWSDWNRSG 110 (232)
Q Consensus 55 --~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~--------------~~~p~~iavd~~----~~~ly~~d~~~~~ 110 (232)
.+.+|++|.....|.++|+.......+.. .. .....|||++|. .+.|||.... .
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls--s 245 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS--A 245 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS--C
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC--C
Confidence 57899999998999999987654322221 00 246789999997 7899999976 3
Q ss_pred CcEEEEe---CC-C---CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC-----CceEEEec--CCCc
Q psy5751 111 PKIEWSN---LD-G---TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN-----RVRRKVYS--NCTY 176 (232)
Q Consensus 111 ~~I~~~~---~~-g---~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-----~~~~~~~~--~~~~ 176 (232)
.+++++. |. . ...+.+..........++++|..+|.||+++...+.|.+.+.++ .+..++++ .+.+
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~ 325 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF 325 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS
T ss_pred CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc
Confidence 4678776 21 1 22333333210233446788866799999999999999999987 34566654 7889
Q ss_pred eEEEEEE-CCEEEEEeCCC
Q psy5751 177 PFGLSIT-DEKYYWTDWKT 194 (232)
Q Consensus 177 p~gla~~-~~~ly~td~~~ 194 (232)
|.++.++ ++.||++..+-
T Consensus 326 pd~~~i~~~g~Lwv~sn~l 344 (381)
T 3q6k_A 326 GTDISVDSKGGLWFMSNGF 344 (381)
T ss_dssp EEEEEECTTSCEEEEECSC
T ss_pred cCeEEECCCCeEEEEECcc
Confidence 9999996 78999987553
No 115
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.18 E-value=3.1e-08 Score=81.96 Aligned_cols=204 Identities=11% Similarity=0.069 Sum_probs=143.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~ 78 (232)
..+++|.+..+.|+++....+ ..|+.+++.+.....+. ........+++.+.++.|+++... ...|+..++.+...
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee-cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 357889998888988876542 37999999876654443 333467889999988888877644 34699999987665
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCc
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKS 156 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~ 156 (232)
..+.. .......++.+|.+..|+++.......+|+.+++++.....+... ......+++++++..|+++... ...
T Consensus 260 ~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 260 RQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp EECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred EeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCCceE
Confidence 44333 334567899999777788776433356899999988765543322 3456689999998899888654 358
Q ss_pred EEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCC--cEEEEeCCCCCcceE
Q psy5751 157 LECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTN--RIESANKEGERAPSI 210 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~--~i~~~~~~g~~~~~i 210 (232)
|+.++++++..+.+... ....++++. +..|+++....+ .|+.++.+|...+.+
T Consensus 337 i~~~d~~~~~~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 337 IAKQDLATGGVQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEEEETTTCCEEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred EEEEECCCCCEEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 99999998776555433 256778874 456777654443 789999887765544
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.18 E-value=5.8e-09 Score=88.93 Aligned_cols=191 Identities=10% Similarity=0.071 Sum_probs=138.1
Q ss_pred CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEE-e-ecCCeEEEEeC-----------------CCCeEE
Q psy5751 10 VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTF-D-WVNRVLYWTDS-----------------QMDTIS 69 (232)
Q Consensus 10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~-d-~~~~~ly~~d~-----------------~~~~I~ 69 (232)
...+||++|..+. +|.+++++.....+++. +....|.|+++ . +.++.+|++.. ..+.+.
T Consensus 100 DG~~lfVnd~~~~-rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANT-RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTT-EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCC-EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3579999998888 99999999876555544 33468999998 4 78999999852 234788
Q ss_pred EEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-----------------------------------CcEE
Q psy5751 70 MANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-----------------------------------PKIE 114 (232)
Q Consensus 70 ~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-----------------------------------~~I~ 114 (232)
++|.+......-+.... +|.++++++.++++|++..+.+. +.+.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 88888644332222222 79999999999999999865322 1244
Q ss_pred EEeCCC--CCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc----------eEEE--ecCCCceEE
Q psy5751 115 WSNLDG--TDR-EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV----------RRKV--YSNCTYPFG 179 (232)
Q Consensus 115 ~~~~~g--~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~----------~~~~--~~~~~~p~g 179 (232)
.++... ... ...+.. -..|.|+.+++++.++|+++...++|..++++..+ .... .+....|.+
T Consensus 258 VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 444443 111 112222 34899999999999999999999999999998432 1122 235577999
Q ss_pred EEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 180 LSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 180 la~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
++++ +|++|++.+-+..|..++.+.
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhH
Confidence 9996 579999999999999999764
No 117
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.17 E-value=1.5e-08 Score=79.38 Aligned_cols=210 Identities=12% Similarity=0.062 Sum_probs=141.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC-CCeEEEEeCCCCCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ-MDTISMANLNDDQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~ 80 (232)
+.++.+.+. +.++++ ..+ .|+.++.+|....++-...-..+.++.+.+ ++.+++++.. +++++.++.+|+....
T Consensus 39 ~~~~~~~pd-G~ilvs--~~~-~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~ 113 (276)
T 3no2_A 39 CNSVAATKA-GEILFS--YSK-GAKMITRDGRELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSK 113 (276)
T ss_dssp CCEEEECTT-SCEEEE--CBS-EEEEECTTSCEEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECTTSCEEEE
T ss_pred CcCeEECCC-CCEEEe--CCC-CEEEECCCCCEEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEE
Confidence 345677774 445553 244 788888877655554432223455667766 5567778776 7899999998876544
Q ss_pred EEe-CC----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 81 IVS-KD----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 81 ~~~-~~----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
+-. .. ...|.++++++ +|.+++++.. .++|..++.+|......-. -..|.++.+.+. +.+++++...+
T Consensus 114 ~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~--~~~v~~~d~~G~~~w~~~~---~~~~~~~~~~~~-g~~~v~~~~~~ 186 (276)
T 3no2_A 114 TEFETGIERPHAQFRQINKNK-KGNYLVPLFA--TSEVREIAPNGQLLNSVKL---SGTPFSSAFLDN-GDCLVACGDAH 186 (276)
T ss_dssp EEECCSCSSGGGSCSCCEECT-TSCEEEEETT--TTEEEEECTTSCEEEEEEC---SSCCCEEEECTT-SCEEEECBTTS
T ss_pred EeccCCCCcccccccCceECC-CCCEEEEecC--CCEEEEECCCCCEEEEEEC---CCCccceeEcCC-CCEEEEeCCCC
Confidence 332 11 12467788887 6777888865 5789999998655444322 246888888875 78888888888
Q ss_pred cEEEEecC-CCceEEEec------CCCceEEEEEE-CCEEEEEeCC----------CCcEEEEeCCCCCcceEEeccCCc
Q psy5751 156 SLECMTIR-NRVRRKVYS------NCTYPFGLSIT-DEKYYWTDWK----------TNRIESANKEGERAPSIALDMMGT 217 (232)
Q Consensus 156 ~i~~~~~~-g~~~~~~~~------~~~~p~gla~~-~~~ly~td~~----------~~~i~~~~~~g~~~~~i~~~~~~~ 217 (232)
+|..++++ |...-.+.. .+..|.++++. ++.+|+++++ ..++..++++|+.+..+.- ....
T Consensus 187 ~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~-~~~~ 265 (276)
T 3no2_A 187 CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLND-KVKF 265 (276)
T ss_dssp EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECC-TTTS
T ss_pred eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecC-cccc
Confidence 99999999 655544532 35568899985 8999999973 3468899998887665432 2335
Q ss_pred ceeEEEE
Q psy5751 218 TYMYGIA 224 (232)
Q Consensus 218 ~~p~gi~ 224 (232)
.++.+|.
T Consensus 266 ~~~~~~~ 272 (276)
T 3no2_A 266 GMISTIC 272 (276)
T ss_dssp CCCCEEE
T ss_pred cceeeee
Confidence 6666653
No 118
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.15 E-value=7e-09 Score=84.23 Aligned_cols=163 Identities=13% Similarity=0.031 Sum_probs=112.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEE--Ee-C-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDV--IT-T-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-- 74 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~--~~-~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-- 74 (232)
|.++++++..+.||+++...+ +|+.++++ ......+ +. . ....|.++++++.++.||+++...+.|.+++++
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTAN-KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTT-EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEECCCCCEEEEEcCCCC-EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC
Confidence 678999998889999998777 89999987 3333222 22 1 135799999999888999999877888887765
Q ss_pred -CCCCE--EEEe---CCC---C-------CceEEE-EeCCCCeEEEEEcCCC---CCcEEEEeCC-CCCcEEE---EEcC
Q psy5751 75 -DDQPK--VIVS---KDL---V-------NPRGIV-VHPYYRKLFWSDWNRS---GPKIEWSNLD-GTDREIF---LKAA 130 (232)
Q Consensus 75 -g~~~~--~~~~---~~~---~-------~p~~ia-vd~~~~~ly~~d~~~~---~~~I~~~~~~-g~~~~~~---~~~~ 130 (232)
|.... ..+. ... . .|.+++ ++|.+++||+++.+.+ .+.|...+++ ......+ ....
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 32211 1122 111 2 488999 9998788998875432 1257666664 2223321 2222
Q ss_pred CCCCcceEEEeC---CCCEEEEEECCCCcEEEEecCCCc
Q psy5751 131 DLKLPNSLAVDF---RTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 131 ~~~~p~~l~~d~---~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
...|.++++++ ++++||+++...+.|..++.++..
T Consensus 306 -~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 306 -TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp -SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred -CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 45789999999 789999998877888887777653
No 119
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.15 E-value=9e-08 Score=82.37 Aligned_cols=190 Identities=8% Similarity=-0.009 Sum_probs=135.2
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--CCCCEEEEeCCCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--DDQPKVIVSKDLVN 88 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~~~~~ 88 (232)
.+.+|+++...+ .|..++.+.......+..+ ..|.++++++.++.+|+++. .+.|.++|+. ......-+. ....
T Consensus 166 ~~~~~V~~~~~~-~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~-~G~~ 241 (567)
T 1qks_A 166 ENLFSVTLRDAG-QIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIK-IGSE 241 (567)
T ss_dssp GGEEEEEETTTT-EEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEE-CCSE
T ss_pred CceEEEEeCCCC-eEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEe-cCCC
Confidence 578999998888 9999999876554444433 47889999999999999874 5789999995 222222222 3457
Q ss_pred ceEEEEe----CCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC----------CCCcceEEEeCCCCEEEEEECCC
Q psy5751 89 PRGIVVH----PYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD----------LKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 89 p~~iavd----~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~----------~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
|.+++++ |.++++|++... .+.+..++.........+.... ...+.++.+++.+...+++....
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~--~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CceeEEccccCCCCCEEEEEEcc--CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 9999999 578899999865 4567777765444332222110 11345788888777888888888
Q ss_pred CcEEEEecCCCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 155 KSLECMTIRNRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
++|+.+++...+...+ ......|+++.++ +.++|+++..+++|..++.....
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 9999999976532222 2345568888885 56899999999999999987443
No 120
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=1.8e-07 Score=76.35 Aligned_cols=110 Identities=8% Similarity=0.022 Sum_probs=75.5
Q ss_pred CCCCEEEEEEc-CCCC--cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCC
Q psy5751 9 CVEGQVYYSSV-ADKS--SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDD 76 (232)
Q Consensus 9 ~~~~~ly~~d~-~~~~--~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~ 76 (232)
+...++|++|. .... .|.+++.+.......+..+ ..| ++++.+.++.||+++. ..+.|.++|....
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 45578999987 4331 5688888755443334433 467 9999999999999985 2467889998754
Q ss_pred CCEEEEeCC-------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751 77 QPKVIVSKD-------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122 (232)
Q Consensus 77 ~~~~~~~~~-------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~ 122 (232)
.....+... ...|.+++++|.+++||++.... ...|..++ +...
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~~ 158 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGGS 158 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-CCeEEEEE-CCCC
Confidence 433222211 25799999999999999997542 35688887 5443
No 121
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.07 E-value=4.3e-08 Score=75.95 Aligned_cols=202 Identities=8% Similarity=0.014 Sum_probs=134.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC-CceeEEEeCC-CCCccEEEEeecCCeEEEEeCC---CCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDG-KNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ---MDTISMANLNDD 76 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~---~~~I~~~~~~g~ 76 (232)
+.+++|++....|+++. .+ .|+.+++++ .....+.... ...+..+++.+.++.|+++... ...|+.++.++.
T Consensus 44 v~~~~~spdg~~l~~~~--~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS--EG-LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG 120 (297)
T ss_dssp CEEEEECTTSSEEEEEE--TT-EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred eEeeEECCCCCEEEEEc--CC-eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence 45789999888887765 44 899999987 6554443222 2456789999988888888733 568999998877
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CC
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DS 154 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~ 154 (232)
....+.. ......++++|.+..|+++.......+|+.+++++.....+... ...+..+++++++..|+++.. ..
T Consensus 121 ~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~ 196 (297)
T 2ojh_A 121 TPRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG--EGRNDGPDYSPDGRWIYFNSSRTGQ 196 (297)
T ss_dssp CCEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS--SSCEEEEEECTTSSEEEEEECTTSS
T ss_pred ceEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC--CCccccceECCCCCEEEEEecCCCC
Confidence 6555433 23477889999777788665432234677777776655443332 456789999999888888754 34
Q ss_pred CcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCC----------CCcEEEEeCCCCCcceE
Q psy5751 155 KSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWK----------TNRIESANKEGERAPSI 210 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~----------~~~i~~~~~~g~~~~~i 210 (232)
.+|+.++.++.....+.........+++. +..|+++... ...|+.++..+...+.+
T Consensus 197 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 197 MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp CEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred ccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 57888887776665554333344566663 4566666442 25688888876655433
No 122
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=3.9e-08 Score=81.32 Aligned_cols=218 Identities=12% Similarity=0.015 Sum_probs=144.2
Q ss_pred CCCCEEEEEEcCCCCcEEEEEcCCC----ceeEEEe-------CCCCCccEEEEeecCCeEEEEeCCC------CeEEEE
Q psy5751 9 CVEGQVYYSSVADKSSIKRAHLDGK----NVEDVIT-------TNIRSPEGLTFDWVNRVLYWTDSQM------DTISMA 71 (232)
Q Consensus 9 ~~~~~ly~~d~~~~~~i~~~~~~g~----~~~~~~~-------~~~~~p~gl~~d~~~~~ly~~d~~~------~~I~~~ 71 (232)
.....||++....+ +|+.++.... ...+++. .+...|.++.+-+. + ||++...+ +.|.++
T Consensus 93 ~~r~~l~v~~l~s~-~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSS-RIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTC-CEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS-C-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCC-eEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC-e-EEEEcCCCcCCCCCCeEEEE
Confidence 56889999999999 9999998633 2223341 24457888888874 4 99876554 689999
Q ss_pred eCCCCCCEEEEe-CCC--CCceEEEEeCCCCeEEEEEcC----------------CCCCcEEEEeCCCCCcEEEEEcC-C
Q psy5751 72 NLNDDQPKVIVS-KDL--VNPRGIVVHPYYRKLFWSDWN----------------RSGPKIEWSNLDGTDREIFLKAA-D 131 (232)
Q Consensus 72 ~~~g~~~~~~~~-~~~--~~p~~iavd~~~~~ly~~d~~----------------~~~~~I~~~~~~g~~~~~~~~~~-~ 131 (232)
|..+........ ... .-+.++.+.|..+.+|.++|+ ....+|...+++.......+... .
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 988766544443 111 224457778888889888864 22578999999864222212211 0
Q ss_pred CCCcceEEE--eCCCCEEEEEEC-----CCCcEEEEecCCCceE---EE--ec-----C-----------CCceEEEEE-
Q psy5751 132 LKLPNSLAV--DFRTDELCWVDA-----DSKSLECMTIRNRVRR---KV--YS-----N-----------CTYPFGLSI- 182 (232)
Q Consensus 132 ~~~p~~l~~--d~~~~~Ly~~d~-----~~~~i~~~~~~g~~~~---~~--~~-----~-----------~~~p~gla~- 182 (232)
...|..|.+ ++++..+|++.. -.+.|+.+..+++.-+ ++ .. . ...|.+|.+
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 235777767 999999999988 7888888777653211 11 01 0 245778887
Q ss_pred -ECCEEEEEeCCCCcEEEEeCC-CCCcceEEe-ccCCc-------------ceeEEEEEEcCC
Q psy5751 183 -TDEKYYWTDWKTNRIESANKE-GERAPSIAL-DMMGT-------------TYMYGIAAVPSS 229 (232)
Q Consensus 183 -~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~-~~~~~-------------~~p~gi~~~~~~ 229 (232)
++.+||+++++.+.|..++.. ....+.+.. +..+. ..|.++++.+++
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG 392 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG 392 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence 477999999999999999864 444443322 22222 258888887765
No 123
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=99.02 E-value=3.3e-07 Score=73.41 Aligned_cols=183 Identities=10% Similarity=0.064 Sum_probs=117.2
Q ss_pred EEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCC-------eEEEEeCC--CCeEEEEeCC--CCCCEEE--
Q psy5751 15 YYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNR-------VLYWTDSQ--MDTISMANLN--DDQPKVI-- 81 (232)
Q Consensus 15 y~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~-------~ly~~d~~--~~~I~~~~~~--g~~~~~~-- 81 (232)
+++-.... .|+.++++|...+.+ + ...++++.+.+.-. .+|.++.. .++|..++++ ......+
T Consensus 43 ii~t~k~~-gL~Vydl~G~~l~~~--~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 43 LITTNKKS-GLVVYSLDGKMLHSY--N-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp EEEEETTT-EEEEEETTSCEEEEE--C-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred EEEEcCCC-CEEEEcCCCcEEEEc--c-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 44333334 699999988776443 2 25678887766222 57999988 8888888665 3322223
Q ss_pred ----EeCCCCCceEEEE--eCCCCeEEEEEcCCCCCcEEEEeC----CCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751 82 ----VSKDLVNPRGIVV--HPYYRKLFWSDWNRSGPKIEWSNL----DGTD-REIFLKAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 82 ----~~~~~~~p~~iav--d~~~~~ly~~d~~~~~~~I~~~~~----~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
+...+..|.|+++ ++..+.+|..-.++ .+++..+.+ +|.. .+.+-....-.+|.|+++|+..++||++
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe
Confidence 1234578999999 87667544433332 356766554 2211 1222121224589999999999999999
Q ss_pred ECCCCcEEEEecC--CCc-eEEEe----cCC-CceEEEEEE-C----CEEEEEeCCCCcEEEEeCC
Q psy5751 151 DADSKSLECMTIR--NRV-RRKVY----SNC-TYPFGLSIT-D----EKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 151 d~~~~~i~~~~~~--g~~-~~~~~----~~~-~~p~gla~~-~----~~ly~td~~~~~i~~~~~~ 203 (232)
+...+ ||+++.+ +.. .+.+. ..+ ..+.||+++ . ++|++++-+++....++..
T Consensus 198 eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 99865 9999955 322 33332 123 368999985 2 5899999888777777765
No 124
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.00 E-value=4.4e-08 Score=79.79 Aligned_cols=207 Identities=8% Similarity=-0.092 Sum_probs=130.5
Q ss_pred CCCEEEEEEcCCC--C-cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCCC
Q psy5751 10 VEGQVYYSSVADK--S-SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDDQ 77 (232)
Q Consensus 10 ~~~~ly~~d~~~~--~-~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~ 77 (232)
...++|++|...+ . .|..++.+.......+..+ ..| ++++++.++.||+++. ..+.|.++|+....
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 3478999998765 2 5778888876654445444 357 9999999999999983 35789999998876
Q ss_pred CEEEEe-C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEE--EeCCCCCcEEE----------------------
Q psy5751 78 PKVIVS-K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW--SNLDGTDREIF---------------------- 126 (232)
Q Consensus 78 ~~~~~~-~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~--~~~~g~~~~~~---------------------- 126 (232)
....+. . ....|.+++++|.+++||+++... ...+.. +++.. ...+
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~-~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS-SAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-SCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-CCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCC
Confidence 543332 1 135799999999999999998641 233444 33322 1111
Q ss_pred -----EEcCC------------------CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec----------C
Q psy5751 127 -----LKAAD------------------LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS----------N 173 (232)
Q Consensus 127 -----~~~~~------------------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----------~ 173 (232)
+.... -..|. + .+..+.+||+.. +.+..++..+...+.+.. .
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEecccccccc
Confidence 11000 01122 2 444567777766 788888887654443321 1
Q ss_pred CCceEE---EEE--ECCEEEEEeC---C-----CCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 174 CTYPFG---LSI--TDEKYYWTDW---K-----TNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 174 ~~~p~g---la~--~~~~ly~td~---~-----~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
...|.| +++ +++++|++.. + ...+..++... +....+.. ...|.||++.+++-
T Consensus 260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~ 326 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGA 326 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSS
T ss_pred ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCC
Confidence 223555 666 4689999865 3 34566888764 33334433 33799999987753
No 125
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.00 E-value=1.3e-06 Score=70.91 Aligned_cols=224 Identities=8% Similarity=0.046 Sum_probs=149.9
Q ss_pred CeEEEEEeCCCCEEEEEEcC--CC--CcEEEEEcCC------CceeEE-E-------eCCCCCccEEEEeecCCeEEEEe
Q psy5751 1 MLIGITVDCVEGQVYYSSVA--DK--SSIKRAHLDG------KNVEDV-I-------TTNIRSPEGLTFDWVNRVLYWTD 62 (232)
Q Consensus 1 ~~~~i~~d~~~~~ly~~d~~--~~--~~i~~~~~~g------~~~~~~-~-------~~~~~~p~gl~~d~~~~~ly~~d 62 (232)
+|.++++|..++++|++=-. .+ .++..+..++ ... ++ . +..+..+.++.+|. .++|++.|
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p-~ll~PYP~w~~~~~lvsV~~v~iD~-~~rLWVLD 104 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHS-PLLNKFSGHKTGKELTSIYQPVIDD-CRRLWVVD 104 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSS-CCBEECTTCSSSCSSSCEEEEEECT-TCEEEEEE
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCc-ccccCCCCCccccceEEeeEEEEcC-CCcEEEEe
Confidence 47899997558999998532 22 2577666542 111 12 1 23467889999998 68899999
Q ss_pred CCC---------------CeEEEEeCCCC--CCEEEEe--C----CCCCceEEEEe-C--C----CCeEEEEEcCCCCCc
Q psy5751 63 SQM---------------DTISMANLNDD--QPKVIVS--K----DLVNPRGIVVH-P--Y----YRKLFWSDWNRSGPK 112 (232)
Q Consensus 63 ~~~---------------~~I~~~~~~g~--~~~~~~~--~----~~~~p~~iavd-~--~----~~~ly~~d~~~~~~~ 112 (232)
.+. -+|...|+... ....... . ......+++|| . . ++..|++|.+ .+-
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~--~~g 182 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL--RGA 182 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT--TTE
T ss_pred CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC--CCc
Confidence 772 15888898887 4322222 1 22345799999 2 2 6899999986 456
Q ss_pred EEEEeCCCCCcEEEEEcC---C--------------CCCcceEEEeCC----CCEEEEEECCCCcEEEEecC-------C
Q psy5751 113 IEWSNLDGTDREIFLKAA---D--------------LKLPNSLAVDFR----TDELCWVDADSKSLECMTIR-------N 164 (232)
Q Consensus 113 I~~~~~~g~~~~~~~~~~---~--------------~~~p~~l~~d~~----~~~Ly~~d~~~~~i~~~~~~-------g 164 (232)
|.++++......-+.+.. + .....||++++. ++.|||......+++++..+ .
T Consensus 183 LIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~ 262 (381)
T 3q6k_A 183 LFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGK 262 (381)
T ss_dssp EEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCC
T ss_pred EEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchh
Confidence 777887655433333210 0 125579999997 78999999988899999742 1
Q ss_pred CceEEEecCC--CceEEEEEE--CCEEEEEeCCCCcEEEEeCCC-----CCcceEEeccCCcceeEEEEEEcCC
Q psy5751 165 RVRRKVYSNC--TYPFGLSIT--DEKYYWTDWKTNRIESANKEG-----ERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 165 ~~~~~~~~~~--~~p~gla~~--~~~ly~td~~~~~i~~~~~~g-----~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
...+.+.+.. ....+++++ .|.||+++...+.|.+.++++ +...++.... ....|.++++..++
T Consensus 263 ~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g 335 (381)
T 3q6k_A 263 LNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKG 335 (381)
T ss_dssp CCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTS
T ss_pred hceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCC
Confidence 2334444443 334466775 689999999999999999987 3345555444 67789999987543
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.00 E-value=7e-07 Score=73.82 Aligned_cols=181 Identities=8% Similarity=0.009 Sum_probs=127.5
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL 101 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l 101 (232)
.|+.++++|.....+... ...+.++++.+.++.|+++.... ..|+..++.+.....+.. .......++++|.+..|
T Consensus 160 ~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 160 ELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEEECTTSSEE
T ss_pred eEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-CCCcccCEEEcCCCCEE
Confidence 799999998765555443 35788899999888888887653 589999998776655443 33467899999977778
Q ss_pred EEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEEEEecCCCceEEEecCCCceEE
Q psy5751 102 FWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLECMTIRNRVRRKVYSNCTYPFG 179 (232)
Q Consensus 102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~~~~~~g~~~~~~~~~~~~p~g 179 (232)
+++........|+..++.+.....+... ......+++++++..|+++.... .+|+.++++++..+.+.........
T Consensus 238 a~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~ 315 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD 315 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEEECCCC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE
T ss_pred EEEEecCCCceEEEEECCCCCEEeCcCC--CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccC
Confidence 8776543456799999987665443322 34567899999988888876433 3899999988765554333344556
Q ss_pred EEEE--CCEEEEEeCC--CCcEEEEeCCCCCcc
Q psy5751 180 LSIT--DEKYYWTDWK--TNRIESANKEGERAP 208 (232)
Q Consensus 180 la~~--~~~ly~td~~--~~~i~~~~~~g~~~~ 208 (232)
+++. +..|+++... ...|..++..+...+
T Consensus 316 ~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred eEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 7773 5577777554 357888888765544
No 127
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.00 E-value=5.2e-07 Score=75.61 Aligned_cols=222 Identities=12% Similarity=0.079 Sum_probs=135.4
Q ss_pred CeEEEEEeCCCC-EEEEEEcCCCCcEEEEEcCCCce-eEE------EeCC-----CCCccEEEEeec---CCeEEEEeCC
Q psy5751 1 MLIGITVDCVEG-QVYYSSVADKSSIKRAHLDGKNV-EDV------ITTN-----IRSPEGLTFDWV---NRVLYWTDSQ 64 (232)
Q Consensus 1 ~~~~i~~d~~~~-~ly~~d~~~~~~i~~~~~~g~~~-~~~------~~~~-----~~~p~gl~~d~~---~~~ly~~d~~ 64 (232)
+|.+|++.+... +||++... + +|++++.+|... ..+ +..+ .....||++++. ++.||++...
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~-G-~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKE-G-YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETT-T-EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCC-c-eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 488999998653 79999864 4 799887766421 111 1111 246788999974 5789987542
Q ss_pred C------------CeEEEEeCCCC--------CCEEEEe----CCCCCceEEEEeCCCCeEEEEEcCCC-----------
Q psy5751 65 M------------DTISMANLNDD--------QPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNRS----------- 109 (232)
Q Consensus 65 ~------------~~I~~~~~~g~--------~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~~----------- 109 (232)
. .+|.+..++.. ..++++. ........|+++| +|.||++-....
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~ 171 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDG 171 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccC
Confidence 1 37888776531 1345554 2234457899998 789999954321
Q ss_pred ----CCcEEEEeCCCC--------------------CcEEEEEcCCCCCcceEEEeCCCC------EEEEEEC-CC----
Q psy5751 110 ----GPKIEWSNLDGT--------------------DREIFLKAADLKLPNSLAVDFRTD------ELCWVDA-DS---- 154 (232)
Q Consensus 110 ----~~~I~~~~~~g~--------------------~~~~~~~~~~~~~p~~l~~d~~~~------~Ly~~d~-~~---- 154 (232)
.++|.|++.+|. ..++.... +.+|.++++|+..+ ++|.+|. +.
T Consensus 172 ~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G--~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~ 249 (463)
T 2wg3_C 172 LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHG--LHDPGRCAVDRHPTDININLTILCSDSNGKNRSS 249 (463)
T ss_dssp CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEEC--CSSCCBEEEESSCSSTTCSEEEEEECC------C
T ss_pred cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEEC--CCCcceEEECCCCCCcccceEEEecccCCCCCCC
Confidence 578999999984 23455555 88999999999744 7888886 21
Q ss_pred CcEEEEecCCCc----eEEE-ec--CCCceEEEEEEC--------CEEEEEeCCCCcEEEEeCCCC--CcceEEec-c--
Q psy5751 155 KSLECMTIRNRV----RRKV-YS--NCTYPFGLSITD--------EKYYWTDWKTNRIESANKEGE--RAPSIALD-M-- 214 (232)
Q Consensus 155 ~~i~~~~~~g~~----~~~~-~~--~~~~p~gla~~~--------~~ly~td~~~~~i~~~~~~g~--~~~~i~~~-~-- 214 (232)
.+|..+.. |.+ ..++ .. ....|.|++++. +.++++++. ++|.++..+.. ..+...+. .
T Consensus 250 ~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~ 327 (463)
T 2wg3_C 250 ARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTS 327 (463)
T ss_dssp EEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEET
T ss_pred CeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCc
Confidence 24444422 221 1111 11 125788999853 348999997 77999987632 22211211 0
Q ss_pred -----CCcceeEEEEEEcCC
Q psy5751 215 -----MGTTYMYGIAAVPSS 229 (232)
Q Consensus 215 -----~~~~~p~gi~~~~~~ 229 (232)
.....|.+|++.+++
T Consensus 328 ~~~~~~~~~r~~~v~~~pdG 347 (463)
T 2wg3_C 328 GSCRGYFSGHILGFGEDELG 347 (463)
T ss_dssp TSSCSCCCSEEEEEEECTTC
T ss_pred ccccccccCcceEEEECCCC
Confidence 113578888887764
No 128
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.95 E-value=3.6e-07 Score=74.61 Aligned_cols=214 Identities=10% Similarity=0.032 Sum_probs=126.0
Q ss_pred eEEEEEeCCCCEEEEEEcC---------CCCcEEEEEcCCCcee-EEEeCC------CCCccEEEEeecCCeEEEEeCC-
Q psy5751 2 LIGITVDCVEGQVYYSSVA---------DKSSIKRAHLDGKNVE-DVITTN------IRSPEGLTFDWVNRVLYWTDSQ- 64 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~---------~~~~i~~~~~~g~~~~-~~~~~~------~~~p~gl~~d~~~~~ly~~d~~- 64 (232)
|. +.+++..++||+++.. .+ .|.+++....... ++.... ...|.++++++.++.||+++..
T Consensus 81 P~-va~spDG~~lyVan~~~~r~~~G~~~~-~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 81 PN-PVVADDGSFIAHASTVFSRIARGERTD-YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp CE-EEECTTSSCEEEEEEEEEETTEEEEEE-EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred Cc-EEECCCCCEEEEEcccccccccCCCCC-EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 54 8999999999999842 34 6889998876543 332221 2479999999999999999875
Q ss_pred CCeEEEEeCCCCCCEEEEeCC---CCCceE----EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751 65 MDTISMANLNDDQPKVIVSKD---LVNPRG----IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNS 137 (232)
Q Consensus 65 ~~~I~~~~~~g~~~~~~~~~~---~~~p~~----iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~ 137 (232)
.+.|.++|+........+... ...|.+ +++.+ +|.+.+.+... .+++..... ..+........+.
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~-DG~~~~v~~~~-~g~v~~~~~------~~~~~~~~~~~~~ 230 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCR-DGSLAKVAFGT-EGTPEITHT------EVFHPEDEFLINH 230 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET-TSCEEEEECCS-SSCCEEEEC------CCCSCTTSCBCSC
T ss_pred CCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECC-CCCEEEEECCC-CCeEEEeec------ceecccccccccc
Confidence 689999999876544333311 112322 25555 33333333321 122211110 0000000111123
Q ss_pred EEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec----------CCCceEE---EEE--ECCEEEEEeC---------C
Q psy5751 138 LAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS----------NCTYPFG---LSI--TDEKYYWTDW---------K 193 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----------~~~~p~g---la~--~~~~ly~td~---------~ 193 (232)
.+++...++++|... .++|+.+++.+...+.+.. ..-.|.| +++ +.++||++.. .
T Consensus 231 ~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 231 PAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp CEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred ceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 467765677766533 6789999998776543321 0111322 455 4789999864 2
Q ss_pred CCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCCC
Q psy5751 194 TNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 194 ~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~~ 230 (232)
.++|..++..+ +..+.+.+ ...|.+|++-.++-
T Consensus 310 ~~~V~viD~~t~kv~~~i~v----g~~~~~lavs~D~~ 343 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEK 343 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEE----EEEECEEEECSSSS
T ss_pred CCEEEEEECCCCeEEEEEEC----CCCcceEEECCCCC
Confidence 36799999874 44445543 23788999987764
No 129
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.94 E-value=1.1e-07 Score=79.67 Aligned_cols=190 Identities=12% Similarity=0.084 Sum_probs=121.2
Q ss_pred EEEeCCCCCccEEEEeecCC-eEEEEeCCCCeEEEEeCCCCC-CEEEEe------CC-----CCCceEEEEeCC---CCe
Q psy5751 37 DVITTNIRSPEGLTFDWVNR-VLYWTDSQMDTISMANLNDDQ-PKVIVS------KD-----LVNPRGIVVHPY---YRK 100 (232)
Q Consensus 37 ~~~~~~~~~p~gl~~d~~~~-~ly~~d~~~~~I~~~~~~g~~-~~~~~~------~~-----~~~p~~iavd~~---~~~ 100 (232)
+++..++..|.+|++.+.+. +||+++.. ++|++++.+|.. ...+.. .. ...+.+||++|. ++.
T Consensus 7 ~~va~gL~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 7 QEVVSGLRQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp EEEEEEESSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred EEeccCCCCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 44556789999999998664 79999875 899999877653 112221 11 346789999984 589
Q ss_pred EEEEEcCCCC----------CcEEEEeCCCC--------CcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-------
Q psy5751 101 LFWSDWNRSG----------PKIEWSNLDGT--------DREIFLKAA---DLKLPNSLAVDFRTDELCWVDA------- 152 (232)
Q Consensus 101 ly~~d~~~~~----------~~I~~~~~~g~--------~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~------- 152 (232)
||++...... .+|.|+.+... ..++++... ..+.-..|+|+++ ++||++-.
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD-G~LYv~~Gd~~~~~~ 164 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD-GFLYIILGDGMITLD 164 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT-SCEEEEECCTTCCHH
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC-CcEEEEeCCCCCCCC
Confidence 9988642111 37888777531 234444321 2455678999997 79999932
Q ss_pred ----------CCCcEEEEecCCC--------------------ceEEEecCCCceEEEEEEC------C--EEEEEeC-C
Q psy5751 153 ----------DSKSLECMTIRNR--------------------VRRKVYSNCTYPFGLSITD------E--KYYWTDW-K 193 (232)
Q Consensus 153 ----------~~~~i~~~~~~g~--------------------~~~~~~~~~~~p~gla~~~------~--~ly~td~-~ 193 (232)
..++|.|+++||. ..++++..+..|.|++++. + ++|.+|. +
T Consensus 165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G 244 (463)
T 2wg3_C 165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNG 244 (463)
T ss_dssp HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC--
T ss_pred ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCC
Confidence 1468999999984 2466778999999999974 3 7888886 2
Q ss_pred ----CCcEEEEeCC---CCCcceEEeccCCcceeEEEEEEcC
Q psy5751 194 ----TNRIESANKE---GERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 194 ----~~~i~~~~~~---g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
..+|..+.+. |-..-.+.++......|.|++++..
T Consensus 245 ~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G 286 (463)
T 2wg3_C 245 KNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRG 286 (463)
T ss_dssp ----CEEEEEEC----CCSCCCCEECCC----CEEEEEECCC
T ss_pred CCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeC
Confidence 1345555332 2111123322111147899988754
No 130
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=1.4e-07 Score=80.46 Aligned_cols=221 Identities=12% Similarity=0.040 Sum_probs=147.9
Q ss_pred eEEEEE-e-CCCCEEEEEE-----------------cCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEe
Q psy5751 2 LIGITV-D-CVEGQVYYSS-----------------VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62 (232)
Q Consensus 2 ~~~i~~-d-~~~~~ly~~d-----------------~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d 62 (232)
|+++.+ . +.++.+|+++ ...+ .+..++.+.......+..+ ..|.++++++.++.+|++.
T Consensus 136 phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~-~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 136 IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN-VFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE-EEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEE
T ss_pred CcceeeeecCCCcEEEEecccccccCCCCcccccccccCc-eEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEe
Confidence 678888 4 7899999985 2222 5777888865443333332 2799999999999999999
Q ss_pred CCCC-------------------------------------eEEEEeCCC--CCC-EEEEeCCCCCceEEEEeCCCCeEE
Q psy5751 63 SQMD-------------------------------------TISMANLND--DQP-KVIVSKDLVNPRGIVVHPYYRKLF 102 (232)
Q Consensus 63 ~~~~-------------------------------------~I~~~~~~g--~~~-~~~~~~~~~~p~~iavd~~~~~ly 102 (232)
+.++ .+.++|... ... ...+. ....|.++.++|.++++|
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~ 292 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLC 292 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEE
Confidence 7652 355566554 111 11222 235899999999999999
Q ss_pred EEEcCCCCCcEEEEeCCCCC----------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC-------C
Q psy5751 103 WSDWNRSGPKIEWSNLDGTD----------REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN-------R 165 (232)
Q Consensus 103 ~~d~~~~~~~I~~~~~~g~~----------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-------~ 165 (232)
+++.. ..+|..++.+... ..+......-..|.+++||+++ ++|++..-.+.|..++++. .
T Consensus 293 V~~~~--s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~ 369 (595)
T 1fwx_A 293 VAGKL--SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGE 369 (595)
T ss_dssp EECTT--SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTC
T ss_pred EeCCC--CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhccc
Confidence 99976 5678888877331 1122222225689999999986 9999999999999999875 1
Q ss_pred c-eEEEec--CCCce------EEEEE--ECCEEEEEeCCC-CcE-----------EEEeCCCCCcceEEeccCCcceeEE
Q psy5751 166 V-RRKVYS--NCTYP------FGLSI--TDEKYYWTDWKT-NRI-----------ESANKEGERAPSIALDMMGTTYMYG 222 (232)
Q Consensus 166 ~-~~~~~~--~~~~p------~gla~--~~~~ly~td~~~-~~i-----------~~~~~~g~~~~~i~~~~~~~~~p~g 222 (232)
+ .+++.. .--.| .|+++ ++.+||.++-.+ .++ +.++-.|...+.+.-..- -.+|+.
T Consensus 370 ~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~-~~ePh~ 448 (595)
T 1fwx_A 370 KVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPT-FAEPHD 448 (595)
T ss_dssp SCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEE-SSCCCC
T ss_pred ccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcC-CCCCCc
Confidence 1 222211 11122 33343 578999999877 666 777777766665543222 468888
Q ss_pred EEEEcCC
Q psy5751 223 IAAVPSS 229 (232)
Q Consensus 223 i~~~~~~ 229 (232)
.++++.+
T Consensus 449 ~~i~~~~ 455 (595)
T 1fwx_A 449 AIAVHPS 455 (595)
T ss_dssp EEEECTT
T ss_pred eEEccHH
Confidence 8888764
No 131
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=8e-07 Score=73.53 Aligned_cols=224 Identities=11% Similarity=0.003 Sum_probs=137.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCC-----CcEEEEEcCCCceeEEEeCC-C--CCccEEEEeecCCeEEEEe-----------
Q psy5751 2 LIGITVDCVEGQVYYSSVADK-----SSIKRAHLDGKNVEDVITTN-I--RSPEGLTFDWVNRVLYWTD----------- 62 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~-----~~i~~~~~~g~~~~~~~~~~-~--~~p~gl~~d~~~~~ly~~d----------- 62 (232)
|+.+...+ ++ ||++..++. +.|..++............+ . .-+.++-+.+..+.+|.++
T Consensus 140 Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 140 LHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred ccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 55666776 44 999877651 27998888866544444322 1 1234455677677777776
Q ss_pred -------CCCCeEEEEeCCCCCCEEEEeC--CCCCceEEEE--eCCCCeEEEEEc-----CCCCCcEEEEeCCCCCc---
Q psy5751 63 -------SQMDTISMANLNDDQPKVIVSK--DLVNPRGIVV--HPYYRKLFWSDW-----NRSGPKIEWSNLDGTDR--- 123 (232)
Q Consensus 63 -------~~~~~I~~~~~~g~~~~~~~~~--~~~~p~~iav--d~~~~~ly~~d~-----~~~~~~I~~~~~~g~~~--- 123 (232)
...++|.+++++.......+.. ....|+.+++ +|....+|++.. . .+.|.+...++...
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L--ss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDL--SSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTC--CEEEEEEEEETTEEEEE
T ss_pred chhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCC--CceEEEEEecCCceeEE
Confidence 2368999999987533333332 2246788776 988889999875 3 34576655544211
Q ss_pred EEE-EEcC----C-----------CCCcceEEEeCCCCEEEEEECCCCcEEEEecC-CCceEEEec---C-C--------
Q psy5751 124 EIF-LKAA----D-----------LKLPNSLAVDFRTDELCWVDADSKSLECMTIR-NRVRRKVYS---N-C-------- 174 (232)
Q Consensus 124 ~~~-~~~~----~-----------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~-g~~~~~~~~---~-~-------- 174 (232)
+++ +... . ...|.+|.+++++++||+++.+.+.|..++++ ..+.+.+.. . .
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~ 375 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPA 375 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTT
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccc
Confidence 111 1100 0 14689999999999999999999999999985 333333321 2 1
Q ss_pred -----CceEEEEE--ECCEEEEEeC-------------CCCcEEEE--eCCCCCcceEE--eccCCcceeEEEEEEcCCC
Q psy5751 175 -----TYPFGLSI--TDEKYYWTDW-------------KTNRIESA--NKEGERAPSIA--LDMMGTTYMYGIAAVPSSC 230 (232)
Q Consensus 175 -----~~p~gla~--~~~~ly~td~-------------~~~~i~~~--~~~g~~~~~i~--~~~~~~~~p~gi~~~~~~~ 230 (232)
..|.++++ ++.+||+|+. .+..+.++ ++.++ ++.-. +..++-..|+.+-.--..|
T Consensus 376 G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~~~~~f~vdf~~~~~h~~r~~ggd~ 454 (462)
T 2ece_A 376 GHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LEIDKEFFVDFGEARSHQVRLSGGDA 454 (462)
T ss_dssp SCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EEEEEEEEEECTTSEEEEEEETTCCT
T ss_pred cccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ceeCCCEEeecccCcceeeecCCCCc
Confidence 15999999 4779999993 34566645 55544 44111 1122224566666555555
No 132
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.90 E-value=4.8e-07 Score=73.46 Aligned_cols=107 Identities=7% Similarity=0.040 Sum_probs=75.5
Q ss_pred CCEEEEEEcC-----CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCC
Q psy5751 11 EGQVYYSSVA-----DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDD 76 (232)
Q Consensus 11 ~~~ly~~d~~-----~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~ 76 (232)
..++|++|.. ++ .|++++.........+..+ ..| ++++++.++.||+++. ..+.|.++|....
T Consensus 15 ~~~~yv~~~~~~~~~d~-~v~v~D~~t~~~~~~i~~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTES-RVHVYDYTNGKFLGMVPTA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGEEEEEECCGGGGGGC-EEEEEETTTCCEEEEEECC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCEEEEECCCCCccccC-eEEEEECCCCeEEEEecCC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 4689999964 34 7899997755443344443 467 9999999999999974 2356999998765
Q ss_pred CCEEEEe-C-----CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 77 QPKVIVS-K-----DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 77 ~~~~~~~-~-----~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
.....+. . ....|.+++++|.+++||++.... .+.|..++++..
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~-~~~v~v~d~~~~ 141 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP-ATSIGIVDVAKG 141 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS-SEEEEEEETTTT
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC-CCeEEEEECCCC
Confidence 4332222 1 235799999999899999998541 356888877654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.86 E-value=3e-06 Score=65.39 Aligned_cols=179 Identities=12% Similarity=0.038 Sum_probs=123.6
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCEEEEeCC-CCCceEEEEeCCCCeE
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPKVIVSKD-LVNPRGIVVHPYYRKL 101 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~-~~~p~~iavd~~~~~l 101 (232)
.|+.+++.+.....+... ...+.++++.+.++.|+++. .+.|++.++++ .....+.... ...+..++++|.+..|
T Consensus 23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 99 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALY 99 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEE
T ss_pred eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEE
Confidence 788888887665444443 35788999999888888775 46899999988 6665554422 2456789999977788
Q ss_pred EEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEEEEecCCCceEEEecCCCceE
Q psy5751 102 FWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLECMTIRNRVRRKVYSNCTYPF 178 (232)
Q Consensus 102 y~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~~~~~~g~~~~~~~~~~~~p~ 178 (232)
+++.... ...+|+.+++++.....+... .....+++++++..|+++....+ +|+.++.++.....+......+.
T Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 176 (297)
T 2ojh_A 100 AISDKVEFGKSAIYLLPSTGGTPRLMTKN---LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRND 176 (297)
T ss_dssp EEEECTTTSSCEEEEEETTCCCCEECCSS---SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEE
T ss_pred EEEEeCCCCcceEEEEECCCCceEEeecC---CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccc
Confidence 8777332 256899999887765544332 34778899999888887655444 67888787776655555555667
Q ss_pred EEEEE--CCEEEEEeC--CCCcEEEEeCCCCCcc
Q psy5751 179 GLSIT--DEKYYWTDW--KTNRIESANKEGERAP 208 (232)
Q Consensus 179 gla~~--~~~ly~td~--~~~~i~~~~~~g~~~~ 208 (232)
.+++. +..|+++.. +...|+.++..+...+
T Consensus 177 ~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 177 GPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE 210 (297)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE
T ss_pred cceECCCCCEEEEEecCCCCccEEEECCCCCCcE
Confidence 88884 456777643 4457777776665544
No 134
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.85 E-value=7.3e-07 Score=77.74 Aligned_cols=207 Identities=9% Similarity=-0.026 Sum_probs=126.7
Q ss_pred EEEEEeCCCCEEEEEEcCC-------C-CcEEEEEcCC------CceeEEEeCCCCCccEEEEeecCCeEEEEeCCC---
Q psy5751 3 IGITVDCVEGQVYYSSVAD-------K-SSIKRAHLDG------KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--- 65 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~-------~-~~i~~~~~~g------~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--- 65 (232)
.+++|++..+.|+++.... . ..|+++++++ .....+.........++++.+.++.|+++....
T Consensus 133 ~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~ 212 (662)
T 3azo_A 133 ADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM 212 (662)
T ss_dssp EEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC
T ss_pred cCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC
Confidence 4788999888998876431 1 2799999998 454333303334566788999889998876432
Q ss_pred ----CeEEEEeCCC-C---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCC--
Q psy5751 66 ----DTISMANLND-D---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKL-- 134 (232)
Q Consensus 66 ----~~I~~~~~~g-~---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~-- 134 (232)
..|+++++++ . ....+.......+..++.+|.+. +|++....+..+|+++++++...+.+.... ....
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~ 291 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPL 291 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCcc
Confidence 4799999984 3 33444443345678889998555 666654323458999998766554443321 0111
Q ss_pred ----cceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEE-EEECCEEEEEeCCC---CcEEEEeCCCCC
Q psy5751 135 ----PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL-SITDEKYYWTDWKT---NRIESANKEGER 206 (232)
Q Consensus 135 ----p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gl-a~~~~~ly~td~~~---~~i~~~~~~g~~ 206 (232)
...+++.+++..+|.+..+..+|+.++.+++..+.+........++ +.+.+.++++-... ..|+.++..+..
T Consensus 292 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 292 WTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp CSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 3467887764444444334457899899877665553333334456 66666665553322 256666665544
Q ss_pred cceE
Q psy5751 207 APSI 210 (232)
Q Consensus 207 ~~~i 210 (232)
.+.+
T Consensus 372 ~~~l 375 (662)
T 3azo_A 372 ARTI 375 (662)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 4433
No 135
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.83 E-value=1.9e-05 Score=62.23 Aligned_cols=214 Identities=9% Similarity=-0.026 Sum_probs=138.4
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce--eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV--EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.+++|++..+.|+.+.. ++ .|...+++.... ...+......+..+++.+.++.|+.+. ..+.|...++.......
T Consensus 101 ~~~~~~~~~~~l~~~~~-d~-~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 101 RSCKLLPDGCTLIVGGE-AS-TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp EEEEECTTSSEEEEEES-SS-EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEcC-CC-cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceee
Confidence 47889986666766553 34 788888886552 223333445678899988666666444 55789999988765544
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
.+......+..++++|.+..|+.+.. .+.|...++........... ......+++++++..|+.+ ...+.|...
T Consensus 178 ~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~-~~~~~i~~~ 251 (337)
T 1gxr_A 178 QFQGHTDGASCIDISNDGTKLWTGGL---DNTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVG-MESSNVEVL 251 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred eeecccCceEEEEECCCCCEEEEEec---CCcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEE-cCCCcEEEE
Confidence 55445567889999986666665553 45688888876544433332 4567899999987777665 456789999
Q ss_pred ecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+++......+........++++. ++.++++-...+.|...+....... ... .....+..+++.++
T Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~--~~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 252 HVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQS--KESSSVLSCDISVD 317 (337)
T ss_dssp ETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-EEE--ECSSCEEEEEECTT
T ss_pred ECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE-EEe--cCCCcEEEEEECCC
Confidence 99877665554455556788885 4455555555688888887643322 111 22344555655443
No 136
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.75 E-value=2.6e-05 Score=61.35 Aligned_cols=213 Identities=8% Similarity=0.043 Sum_probs=133.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce---eEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV---EDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~---~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
.+++|++....|+.+. ++ .|...+++.... ...+. .....+..+++.+.++.|+.+. ..+.|...+++...
T Consensus 55 ~~~~~~~~~~~l~~~~--dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 55 CAVTISNPTRHVYTGG--KG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLAAPT 130 (337)
T ss_dssp CEEEECSSSSEEEEEC--BS-EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECCCC-
T ss_pred EEEEEecCCcEEEEcC--CC-eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCC
Confidence 4688888677776665 55 788888875321 12222 2345678899998666666544 55789999998766
Q ss_pred CE--EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 78 PK--VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 78 ~~--~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
.. ............++++|.+..|+.... .+.|...++........+... ......+++++++..|+.+ ...+
T Consensus 131 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~-~~dg 205 (337)
T 1gxr_A 131 PRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGH-TDGASCIDISNDGTKLWTG-GLDN 205 (337)
T ss_dssp -EEEEEEECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEE-ETTS
T ss_pred cceeeecccCCCceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCceeeeeecc-cCceEEEEECCCCCEEEEE-ecCC
Confidence 32 333345556789999986666666653 356888888765433333322 4567899999986666655 4577
Q ss_pred cEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751 156 SLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
.|...+++................+++. ++..+++-...+.|...+........+. .....+..+++.+
T Consensus 206 ~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~~v~~~~~~~ 275 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH---LHESCVLSLKFAY 275 (337)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC---CCSSCEEEEEECT
T ss_pred cEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEc---CCccceeEEEECC
Confidence 8999998876554444444556677774 3444444444677888887754433221 2233455555543
No 137
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.73 E-value=4.9e-05 Score=61.97 Aligned_cols=220 Identities=5% Similarity=-0.064 Sum_probs=138.3
Q ss_pred eEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCC-------ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751 2 LIGITVDC-VEGQVYYSSVADKSSIKRAHLDGK-------NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73 (232)
Q Consensus 2 ~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~-------~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~ 73 (232)
..+++|++ ..+.|+.+. .++ .|...++... .....+......+..+++.+.++.++++-...+.|...++
T Consensus 84 V~~~~~~p~~~~~l~s~s-~dg-~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGS-EDC-TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp EEEEEECTTCTTEEEEEE-TTS-EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEET
T ss_pred EEEEEeCCCCCCEEEEEe-CCC-eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 35788988 455555444 455 7888888754 2223344444678899999866556667667788999998
Q ss_pred CCCCCEEEE--eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEE
Q psy5751 74 NDDQPKVIV--SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 74 ~g~~~~~~~--~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
........+ .........++++|....|+.+.. .+.|...++........+ .......+..++++++ +.++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 237 (402)
T 2aq5_A 162 GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR---DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTT 237 (402)
T ss_dssp TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEE
T ss_pred CCCCccEEEecCCCCCceEEEEECCCCCEEEEEec---CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEE
Confidence 876555455 334556789999985556655553 457888888765443333 2211223688999987 555555
Q ss_pred E---CCCCcEEEEecCCCce--EEE-ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC--cceEEeccCCccee
Q psy5751 151 D---ADSKSLECMTIRNRVR--RKV-YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGER--APSIALDMMGTTYM 220 (232)
Q Consensus 151 d---~~~~~i~~~~~~g~~~--~~~-~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~--~~~i~~~~~~~~~p 220 (232)
- ...+.|...+++.... ... .........+++. +..|+++-...+.|...+..... ...+... ......
T Consensus 238 g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~-~~~~~v 316 (402)
T 2aq5_A 238 GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF-SSKESQ 316 (402)
T ss_dssp EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE-CCSSCC
T ss_pred eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc-ccCCcc
Confidence 4 5677898988886443 222 2334456777875 56788887777888888887544 3333221 123445
Q ss_pred EEEEEEcC
Q psy5751 221 YGIAAVPS 228 (232)
Q Consensus 221 ~gi~~~~~ 228 (232)
.++++.++
T Consensus 317 ~~~~~sp~ 324 (402)
T 2aq5_A 317 RGMGYMPK 324 (402)
T ss_dssp SEEEECCG
T ss_pred cceEEecc
Confidence 66665543
No 138
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.68 E-value=4e-05 Score=65.31 Aligned_cols=214 Identities=13% Similarity=0.157 Sum_probs=139.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.++++.+....|..+. .++ .|...+.++.....+. .....+.++++.+.++.|..+ ...+.|...+.++.....+
T Consensus 347 v~~~~~s~~g~~l~~~~-~dg-~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 347 VWGVAFSPDGQTIASAS-DDK-TVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTL 422 (577)
T ss_dssp EEEEEECTTSSEEEEEE-TTS-EEEEEETTCCEEEEEE-CCSSCEEEEEECTTSSCEEEE-ETTSEEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEEe-CCC-EEEEEcCCCCEEEEec-CCCCCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCCEEEEe
Confidence 35788888666665544 344 6888887765543333 334678899999877766544 4457888889877654444
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
. .......+++++|.+..|..+.. .+.|...++++.....+... -....++++++++..|..+ ...+.|...+
T Consensus 423 ~-~~~~~v~~~~~s~d~~~l~~~~~---d~~v~~w~~~~~~~~~~~~~--~~~v~~~~~spd~~~las~-~~d~~i~iw~ 495 (577)
T 2ymu_A 423 T-GHSSSVWGVAFSPDDQTIASASD---DKTVKLWNRNGQLLQTLTGH--SSSVRGVAFSPDGQTIASA-SDDKTVKLWN 495 (577)
T ss_dssp E-CCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTSCEEEEEECC--SSCEEEEEECTTSCEEEEE-ETTSEEEEEE
T ss_pred c-CCCCCeEEEEECCCCCEEEEEcC---CCEEEEEECCCCEEEEEcCC--CCCEEEEEEcCCCCEEEEE-eCCCEEEEEc
Confidence 3 34556789999986666655543 35688888877655444332 4567899999986655544 4567788888
Q ss_pred cCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 162 IRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 162 ~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
.+|...+.+.........+++. ++.+..+-...+.|...+..|+....+. .+.....+|++-+++
T Consensus 496 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~---~h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 496 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT---GHSSSVWGVAFSPDG 561 (577)
T ss_dssp TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEE---CCSSCEEEEEECTTS
T ss_pred CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEc---CCCCCEEEEEEcCCC
Confidence 8876666665445556788884 4555555555678888887766544442 445566778776654
No 139
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.65 E-value=4.9e-05 Score=61.13 Aligned_cols=196 Identities=10% Similarity=-0.007 Sum_probs=125.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++..+.|.-+. .++ .|...++........+......+..+++.+.+..++.+-...+.|...|+........+
T Consensus 131 ~~v~~spdg~~l~sgs-~d~-~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 131 STVSVLSSGTQAVSGS-KDI-CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp EEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred EEEEECCCCCEEEEEe-CCC-eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence 4788988666655444 445 68888988655444444445677889998877778878777789999998766554433
Q ss_pred e--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 83 S--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 83 ~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
. .....+..++.+|.++.++.+-.. .+.|...++........+... ....+.+++++++.++..+-+..+.|...
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~--dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDE--NGTVSLVDTKSTSCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEET--TSEEEEEESCC--CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred ecceeeccceeeeecCCCCcceEEecc--CCcEEEEECCCCcEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 2 233456789999877777776533 456888887654433223322 45668999999866665665667788888
Q ss_pred ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
+.+..+...+........++++. +..|+.+-...+.|..-+..
T Consensus 286 d~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 286 DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp CTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred ECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 88766544333333445677873 44566665555666544443
No 140
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.64 E-value=5.2e-05 Score=62.65 Aligned_cols=196 Identities=12% Similarity=0.041 Sum_probs=131.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----------CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDG----------KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN 72 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----------~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~ 72 (232)
..++|.+.++.++++-..++ .|..+++.. ......+...-..+.+|++.+.+..++++....+.|...+
T Consensus 132 ~~l~~~p~~~~~lat~~~dg-~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 210 (430)
T 2xyi_A 132 NRARYMPQNACVIATKTPSS-DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWD 210 (430)
T ss_dssp SEEEEETTEEEEEEEECSSS-CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEE
T ss_pred EEEEECCCCCcEEEEECCCC-cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEe
Confidence 46788886566666665556 788888864 1222233334457888999886664666777778999999
Q ss_pred CCCCCC-------EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC----CcEEEEEcCCCCCcceEEEe
Q psy5751 73 LNDDQP-------KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT----DREIFLKAADLKLPNSLAVD 141 (232)
Q Consensus 73 ~~g~~~-------~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~----~~~~~~~~~~~~~p~~l~~d 141 (232)
+..... ............+++.+|.++.++.+... .+.|...++... ....+ ... -..++.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~~~~~~~~~~~~~-~~~-~~~v~~i~~~ 286 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD--DQKLMIWDTRNNNTSKPSHTV-DAH-TAEVNCLSFN 286 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCSCSSSCSEEE-ECC-SSCEEEEEEC
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC--CCeEEEEECCCCCCCcceeEe-ecC-CCCeEEEEeC
Confidence 876321 12233355567899999867777777654 567888888754 22222 222 4578999999
Q ss_pred CCCCEEEEEECCCCcEEEEecCCC-c-eEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 142 FRTDELCWVDADSKSLECMTIRNR-V-RRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 142 ~~~~~Ly~~d~~~~~i~~~~~~g~-~-~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
+.+..++++-...+.|...+++.. . ...+.........+++. +..++.+-...+.|...+..
T Consensus 287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 287 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 987778888777888999999863 2 33343344556788884 44677777777778777765
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.62 E-value=1e-05 Score=71.33 Aligned_cols=199 Identities=6% Similarity=-0.000 Sum_probs=129.8
Q ss_pred eEEEEEeCCCCEEEEEEc-CCC---CcEEEEEcCCCceeEEEeCCCC------------------------CccEEEEee
Q psy5751 2 LIGITVDCVEGQVYYSSV-ADK---SSIKRAHLDGKNVEDVITTNIR------------------------SPEGLTFDW 53 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~-~~~---~~i~~~~~~g~~~~~~~~~~~~------------------------~p~gl~~d~ 53 (232)
+.+++|.+..+.|+++.. ..+ ..|+.+++++.....+...... .+.++++.+
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 467899998888988876 331 2699999987765555532211 257889999
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCC---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC
Q psy5751 54 VNRVLYWTDSQMDTISMANLNDD---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA 130 (232)
Q Consensus 54 ~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~ 130 (232)
.++.|+++.. +.|+++++++. ....+.. ....+..++++|.++.|.++.. ..|+..++++.....+....
T Consensus 119 Dg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~----~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 119 DAQRLLFPLG--GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG----RNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp TSSEEEEEET--TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET----TEEEEEETTTTEEEECCCCC
T ss_pred CCCEEEEEeC--CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC----CcEEEEecCCCCEEEeccCC
Confidence 8888988876 78999999887 5444333 3356789999998777887763 36999998876544332221
Q ss_pred C---------------CCCcceEEEeCCCCEEEEEECCC--------------------------------CcEEEEecC
Q psy5751 131 D---------------LKLPNSLAVDFRTDELCWVDADS--------------------------------KSLECMTIR 163 (232)
Q Consensus 131 ~---------------~~~p~~l~~d~~~~~Ly~~d~~~--------------------------------~~i~~~~~~ 163 (232)
. ...+.++++++++.+|+++.... ..|+.++++
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 0 01257899999988898884322 167888888
Q ss_pred C-CceEEEecC---CCceEEEEE-ECCEEEEEeC----CCCcEEEEeCCCCCc
Q psy5751 164 N-RVRRKVYSN---CTYPFGLSI-TDEKYYWTDW----KTNRIESANKEGERA 207 (232)
Q Consensus 164 g-~~~~~~~~~---~~~p~gla~-~~~~ly~td~----~~~~i~~~~~~g~~~ 207 (232)
+ ++...+... ......+++ ++..|+++.. ....|+.++..+...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 7 665554321 122334444 4556766543 234677777664443
No 142
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.62 E-value=0.00012 Score=59.73 Aligned_cols=195 Identities=7% Similarity=-0.025 Sum_probs=127.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~ 80 (232)
..+++|++..+.|+.+.. ++ .|...++........+......+..++++ .+.| ++-...+.|...++.. .....
T Consensus 137 v~~v~~s~~~~~l~~~~~-dg-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLG-NG-LVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVL-SSGSRSGAIHHHDVRIANHQIG 211 (401)
T ss_dssp EEEEEECTTSSEEEEEET-TS-CEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEE-EEEETTSEEEEEETTSSSCEEE
T ss_pred EEEEEECCCCCEEEEECC-CC-eEEEEECcCCeEEEEecCCCCceEEEEEC--CCEE-EEEcCCCCEEEEecccCcceee
Confidence 357889986666666554 44 68888988655434444444566666664 4544 4555668999999984 33344
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~ 158 (232)
.+........+++++|.+..|+.+.. .+.|...++........+... ......+++++.+..++.+-. ..+.|.
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGN---DNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeC---CCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 44456667889999985555555553 356888888865544433332 556789999998788888755 578899
Q ss_pred EEecCCCceEEEecCCCceEEEEEE--CCEEEEEe-CCCCcEEEEeCCCC
Q psy5751 159 CMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD-WKTNRIESANKEGE 205 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td-~~~~~i~~~~~~g~ 205 (232)
..+++................+++. +..++.+. ...+.|...+....
T Consensus 288 i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 288 FWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 9999866554444444456778874 44555553 35677777776643
No 143
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.62 E-value=8.5e-05 Score=63.29 Aligned_cols=212 Identities=14% Similarity=0.154 Sum_probs=137.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++++.+....|..+. .++ .|...++++.....+ ......+.++++.+.++.|... ...+.|...+.++.....+.
T Consensus 307 ~~~~~~~~~~~l~t~~-~d~-~i~~w~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~~~~~~~~~~ 382 (577)
T 2ymu_A 307 WGVAFSPDGQTIASAS-DDK-TVKLWNRNGQHLQTL-TGHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLT 382 (577)
T ss_dssp EEEEECTTSSEEEEEE-TTS-CEEEEETTSCEEEEE-CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTCCEEEEEE
T ss_pred EEEEECCCCCEEEEEe-CCC-eEEEEeCCCCeeEEE-eCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEcCCCCEEEEec
Confidence 4778888666555443 445 688888887665433 3334577889999866666544 45578888898776544443
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
.....+.+++++|.+..|..... .+.|...+.++.....+... -....++++++++..|..+ ...+.|...+.
T Consensus 383 -~~~~~v~~~~~s~dg~~l~~~~~---d~~v~~~~~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~ 455 (577)
T 2ymu_A 383 -GHSSSVRGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLTGH--SSSVWGVAFSPDDQTIASA-SDDKTVKLWNR 455 (577)
T ss_dssp -CCSSCEEEEEECTTSSCEEEEET---TSEEEEECTTCCEEEEEECC--SSCEEEEEECTTSSEEEEE-ETTSEEEEEET
T ss_pred -CCCCCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCEEEEecCC--CCCeEEEEECCCCCEEEEE-cCCCEEEEEEC
Confidence 35567789999986665555543 35677788776654444332 3456789999986666554 45677888888
Q ss_pred CCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751 163 RNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 163 ~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
++.....+.........+++. ++.+..+-...+.|...+..|...+.+. .+......|++-++
T Consensus 456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~---~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT---GHSSSVRGVAFSPD 519 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEE---CCSSCEEEEEECTT
T ss_pred CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEe---CCCCCEEEEEEcCC
Confidence 876666555555556788884 5555555555677888887776555443 33445566666544
No 144
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.58 E-value=3.4e-05 Score=62.36 Aligned_cols=203 Identities=9% Similarity=0.019 Sum_probs=127.3
Q ss_pred EEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 5 ITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
.+|.+..+.|+++...++ ..|+.+++++.....+.........++++.+.++.|+++... ..|++.++++.....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeeee
Confidence 457777777777654222 369999998876544443322233367888888999988854 589999999887666665
Q ss_pred CCCCCc--eEEEEeCCCCeEEEEEc-------------------CCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751 84 KDLVNP--RGIVVHPYYRKLFWSDW-------------------NRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 84 ~~~~~p--~~iavd~~~~~ly~~d~-------------------~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~ 142 (232)
...... ...++++....+..... ......|++.++.+...+.+... ......+++++
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~sp 197 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE--NQWLGHPIYRP 197 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEET
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC--CccccccEECC
Confidence 222211 12234664444443210 11236799999988777666654 34578899999
Q ss_pred -CCCEEEEEECC-----CCcEEEEecCCCceEEEecCCC--ceEEEEEE--CCEEEE-EeCCCC---cEEEEeCCCCCcc
Q psy5751 143 -RTDELCWVDAD-----SKSLECMTIRNRVRRKVYSNCT--YPFGLSIT--DEKYYW-TDWKTN---RIESANKEGERAP 208 (232)
Q Consensus 143 -~~~~Ly~~d~~-----~~~i~~~~~~g~~~~~~~~~~~--~p~gla~~--~~~ly~-td~~~~---~i~~~~~~g~~~~ 208 (232)
++++|.++... ..+|+.++.++...+.+..... .....++. +..|++ ++.... .|+.++..+...+
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 87788776543 4589999999887666544332 23345563 445644 443322 3889998866655
Q ss_pred eE
Q psy5751 209 SI 210 (232)
Q Consensus 209 ~i 210 (232)
.+
T Consensus 278 ~l 279 (388)
T 3pe7_A 278 QL 279 (388)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 145
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.57 E-value=2.1e-06 Score=74.87 Aligned_cols=199 Identities=8% Similarity=0.034 Sum_probs=126.8
Q ss_pred CCCCE-EEEEEcCCCCcEEEEEcC--C-CceeEEEeC----CCCCccEEEEeecCCeEEEEeCC---------CCeEEEE
Q psy5751 9 CVEGQ-VYYSSVADKSSIKRAHLD--G-KNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQ---------MDTISMA 71 (232)
Q Consensus 9 ~~~~~-ly~~d~~~~~~i~~~~~~--g-~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~---------~~~I~~~ 71 (232)
+.++. |+++..... +|+.++++ | .....+... ......++++.+.++.|+++... ...|+++
T Consensus 88 PDg~~~la~~~~~~~-~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQ-RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTC-CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCC-eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 66777 888876666 89999998 4 443333321 12356788899988889887643 1579999
Q ss_pred eCCC------CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCC-----CCCcEEEEeCCC-C---CcEEEEEcCCCCCcc
Q psy5751 72 NLND------DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNR-----SGPKIEWSNLDG-T---DREIFLKAADLKLPN 136 (232)
Q Consensus 72 ~~~g------~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~-----~~~~I~~~~~~g-~---~~~~~~~~~~~~~p~ 136 (232)
++++ ...+.+.........+++++|.++.|+++.+.. ....|+.+++++ . ....+.... ...+.
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~ 245 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIA 245 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEE
T ss_pred ECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEc
Confidence 9998 555544412233456788999888898887543 125799999984 3 333444332 35677
Q ss_pred eEEEeCCCCEEEEEECCCC--cEEEEecCCCceEEEecC---CCc------eEEEEEE-CCEEEEEeC-CCCcEEEEeCC
Q psy5751 137 SLAVDFRTDELCWVDADSK--SLECMTIRNRVRRKVYSN---CTY------PFGLSIT-DEKYYWTDW-KTNRIESANKE 203 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~~~--~i~~~~~~g~~~~~~~~~---~~~------p~gla~~-~~~ly~td~-~~~~i~~~~~~ 203 (232)
.+++++++. ||++....+ +|+++++++++.+.+... ... ...+++. +++++++-. +..+|+.++..
T Consensus 246 ~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 324 (662)
T 3azo_A 246 QAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPE 324 (662)
T ss_dssp EEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETT
T ss_pred ceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECC
Confidence 899999866 777655555 899999876665544331 111 2346663 555655533 44567777877
Q ss_pred CCCcceE
Q psy5751 204 GERAPSI 210 (232)
Q Consensus 204 g~~~~~i 210 (232)
+...+.+
T Consensus 325 ~~~~~~l 331 (662)
T 3azo_A 325 SGELVDA 331 (662)
T ss_dssp TTEEEEC
T ss_pred CCcEEEe
Confidence 5554433
No 146
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.56 E-value=2.1e-05 Score=65.06 Aligned_cols=196 Identities=9% Similarity=0.074 Sum_probs=129.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
.+++|++....++++...++ .|...++..... ..........+.++++.+..+.++++....+.|...++..
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDH-TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCEEECTTSTTEEEEECTTS-CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred EEEEeCCCCCCeEEEEeCCC-eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 46888886663555555556 799999875211 1223233456888999886777888888889999999876
Q ss_pred C---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751 76 D---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 76 ~---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
. .....+......+..++++|....++++... .+.|...++.... ...+... ......+++++.+..++.+
T Consensus 264 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~~h--~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKLKLHSFESH--KDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp SCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTSCSEEEECC--SSCEEEEEECSSCTTEEEE
T ss_pred CCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCCCeEEeecC--CCCEEEEEECCCCCCEEEE
Confidence 5 2333334455678999999976667766543 4568888887532 3333222 4567899999987778888
Q ss_pred ECCCCcEEEEecCCCce------------EEE--e-cCCCceEEEEEE-CC-EEEEEeCCCCcEEEEeCC
Q psy5751 151 DADSKSLECMTIRNRVR------------RKV--Y-SNCTYPFGLSIT-DE-KYYWTDWKTNRIESANKE 203 (232)
Q Consensus 151 d~~~~~i~~~~~~g~~~------------~~~--~-~~~~~p~gla~~-~~-~ly~td~~~~~i~~~~~~ 203 (232)
-...+.|...+++.... +.+ . .....+..+++. .+ +++++-...+.|...+..
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 77778888888764211 122 2 234457888885 33 377776677777776654
No 147
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.55 E-value=3.3e-05 Score=62.34 Aligned_cols=196 Identities=11% Similarity=0.050 Sum_probs=126.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|.+..+.|..+. .++ .|...++........+......+..+++.+.++.++.+....+.|...|+.........
T Consensus 143 ~~v~~spdg~~l~sgs-~dg-~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~ 220 (357)
T 4g56_B 143 KTLSVFSDGTQAVSGG-KDF-SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI 220 (357)
T ss_dssp EEEEECSSSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC
T ss_pred EEEEECCCCCEEEEEe-CCC-eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee
Confidence 5788988666665544 444 68888888665444444445678889998766667777777788999888665433322
Q ss_pred e--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 83 S--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 83 ~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
. .....+..++++|.++.++.+-.. .+.|...++........+... ......++++++++++..+-...+.|...
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~--d~~i~~wd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDE--TGNVSLVNIKNPDSAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEES--SSCEEEEESSCGGGCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred eeccccccccchhhhhcccceEEEeec--ccceeEEECCCCcEeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 2 233456789999877776665432 456888887655433333322 44568999999866655555567788888
Q ss_pred ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
+++.++............+|++. ++.++.|-...+.|..-+..
T Consensus 298 d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 298 DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 88866544333333446788883 45556665556766666643
No 148
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.52 E-value=0.00015 Score=58.46 Aligned_cols=203 Identities=14% Similarity=0.017 Sum_probs=130.4
Q ss_pred eEEEEEeCCC-CEEEEEEcCCCCcEEEEEcCCCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVE-GQVYYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~-~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
..+++|++.+ +.|+.+. .++ .|...++........+. .....+.++++.+.++.++++-...+.|...++.+...
T Consensus 76 v~~~~~~~~~~~~l~s~~-~dg-~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGS-KGG-DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI 153 (383)
T ss_dssp EEEEEECSSCTTEEEEEE-BTS-CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE
T ss_pred EEEEEECCCCCCEEEEEc-CCC-eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce
Confidence 3578899866 4555544 445 79999998665544443 23456788888874444555656668999999997554
Q ss_pred EEEEeCC--CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 79 KVIVSKD--LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 79 ~~~~~~~--~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
..+.... ......++++|....|+.... .+.|...++.+.....+... .....++++++.+..++++-...+.
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLLLGLDGHEIFKEKLH--KAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEEEETTSCEEEEEECS--SSCEEEEEECSSCTTEEEEEETTSE
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEEEECCCCEEEEeccC--CCcEEEEEECCCCCCEEEEEeCCCE
Confidence 4444322 245789999996666655553 46788898876544444322 4677899999986645566566788
Q ss_pred EEEEecCC----CceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751 157 LECMTIRN----RVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIA 211 (232)
Q Consensus 157 i~~~~~~g----~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~ 211 (232)
|...+++. ..............++++. ++.++++-...+.|...+.. +.....+.
T Consensus 229 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 229 VKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp EEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred EEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 88888874 2222223344556788874 45555555556888888876 44444443
No 149
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=0.00028 Score=58.45 Aligned_cols=218 Identities=9% Similarity=-0.029 Sum_probs=131.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
..+++|++.+..|+++...++ .|..+++. .......+. .....+.++++.+.++.|+.++. .+.|+.+++....
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDK-SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSIP 182 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGT-EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSCC
T ss_pred eEEEEEcCCCCEEEEEECCCC-eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCcc
Confidence 358899998888777765666 78888877 443333332 22357789999997788877765 5789999876544
Q ss_pred CEE----EEeCCCCCceEEEEeCC---CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751 78 PKV----IVSKDLVNPRGIVVHPY---YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 78 ~~~----~~~~~~~~p~~iavd~~---~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
... .+.........++++|. +..|+.+.. .+.|...++...................++++ ++..|+.+
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR---DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET---TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcC---CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence 321 22224456789999985 335544443 35687777765543322221214567899999 65566544
Q ss_pred ECCCCcEEEEecCCCceEEEec--------------------------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeC
Q psy5751 151 DADSKSLECMTIRNRVRRKVYS--------------------------NCTYPFGLSIT--DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 151 d~~~~~i~~~~~~g~~~~~~~~--------------------------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~ 202 (232)
...+.|...+++.++...... ......++++. +..|+.+....+.|...+.
T Consensus 259 -~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 259 -GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp -ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred -eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 567789888888655322221 01123466663 5678887756777777776
Q ss_pred --C-CCCcceEEeccCCcceeEEEEEEc
Q psy5751 203 --E-GERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 203 --~-g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
. +...+.+... .....+..+++.+
T Consensus 338 ~~~~~~~l~~~~~~-~~~~~v~~~~~~~ 364 (450)
T 2vdu_B 338 SEKQKGDLALKQII-TFPYNVISLSAHN 364 (450)
T ss_dssp CSSSTTCEEEEEEE-ECSSCEEEEEEET
T ss_pred ccCCCCceeeccEe-ccCCceEEEEecC
Confidence 2 3222322221 1125566666654
No 150
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.50 E-value=2.8e-05 Score=61.39 Aligned_cols=184 Identities=11% Similarity=0.092 Sum_probs=114.5
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
++.||++... + .|++++.+|....... ........++++. .+.||+.. ..+.|+.++.+|.... ..........
T Consensus 107 ~~~l~v~t~~-~-~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~vgt-~~~~l~~~d~~g~~~~-~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMD-G-HLYAINTDGTEKWRFK-TKKAIYATPIVSE-DGTIYVGS-NDNYLYAINPDGTEKW-RFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTT-S-EEEEECTTSCEEEEEE-CSSCCCSCCEECT-TSCEEEEC-TTSEEEEECTTSCEEE-EEECSSCCCS
T ss_pred CCEEEEEecC-C-EEEEEcCCCCEEEEEc-CCCceeeeeEEcC-CCEEEEEc-CCCEEEEECCCCCEeE-EEecCCCcee
Confidence 6778776533 4 6999998854432222 2223455667776 56677665 3478999998844322 2222334556
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV 170 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~ 170 (232)
.+++++ ++.||++. +.+++++.+|...... ... .....++++|.+ +.||++.. .+.+.+++.+|.....+
T Consensus 181 ~~~~d~-~g~l~v~t-----~~l~~~d~~g~~~~~~-~~~-~~~~~~~~~~~~-g~l~v~t~-~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 181 AASIGK-DGTIYFGS-----DKVYAINPDGTEKWNF-YAG-YWTVTRPAISED-GTIYVTSL-DGHLYAINPDGTEKWRF 250 (330)
T ss_dssp CCEECT-TCCEEEES-----SSEEEECTTSCEEEEE-CCS-SCCCSCCEECTT-SCEEEEET-TTEEEEECTTSCEEEEE
T ss_pred eeEEcC-CCEEEEEe-----CEEEEECCCCcEEEEE-ccC-CcceeceEECCC-CeEEEEcC-CCeEEEECCCCCEeEEe
Confidence 778886 78888877 2488888554432222 111 345678888876 78988854 56788888776654444
Q ss_pred ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEE
Q psy5751 171 YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIA 211 (232)
Q Consensus 171 ~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~ 211 (232)
......+..++++ ++.||++.. .+.|.+++++|+......
T Consensus 251 ~~~~~~~~~~~~~~~g~l~v~t~-~ggl~~~d~~g~~~~~~~ 291 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDTIYFGSY-DGHLYAINPDGTEKWNFE 291 (330)
T ss_dssp ECSSCCCSCCEECTTSCEEEECT-TCEEEEECTTSCEEEEEE
T ss_pred eCCCCccccceEcCCCeEEEecC-CCCEEEECCCCcEEEEEE
Confidence 3333333456666 788888765 357999998766555444
No 151
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.49 E-value=0.00024 Score=62.56 Aligned_cols=205 Identities=8% Similarity=-0.007 Sum_probs=129.7
Q ss_pred EEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--------------
Q psy5751 3 IGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-------------- 65 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-------------- 65 (232)
.+++|.+..+.|.++....+ ..|+.+++++.......... ....+++..+.++.||++....
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 36788988888866644332 26999999877654332222 1356788888788898876442
Q ss_pred -CeEEEEeCCCCCC--EEEEeCC--CCCceEEEEeCCCCeEEEEEcCCC--CCcEEEEeCCC------C--CcEEEEEcC
Q psy5751 66 -DTISMANLNDDQP--KVIVSKD--LVNPRGIVVHPYYRKLFWSDWNRS--GPKIEWSNLDG------T--DREIFLKAA 130 (232)
Q Consensus 66 -~~I~~~~~~g~~~--~~~~~~~--~~~p~~iavd~~~~~ly~~d~~~~--~~~I~~~~~~g------~--~~~~~~~~~ 130 (232)
..|++.++.+... ..+.... .....+++++|.++.|+++..... ...|+..++++ . ....+....
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 3499999977653 3343322 222468899998888888764321 46899999875 3 344443332
Q ss_pred CCCCcceEEEeCCCCEEEEEECC---CCcEEEEecCCCc---eEEEecCCC--ceEEEEEE-CCEEEEEeCCCC--cEEE
Q psy5751 131 DLKLPNSLAVDFRTDELCWVDAD---SKSLECMTIRNRV---RRKVYSNCT--YPFGLSIT-DEKYYWTDWKTN--RIES 199 (232)
Q Consensus 131 ~~~~p~~l~~d~~~~~Ly~~d~~---~~~i~~~~~~g~~---~~~~~~~~~--~p~gla~~-~~~ly~td~~~~--~i~~ 199 (232)
. ...-.+++++++||+.... ..+|+.+++++.. .+.+..... ...++++. ++.|+++....+ +|+.
T Consensus 287 --~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 287 --E-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp --S-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred --C-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 1 2223577778899888553 3589999998764 244433322 45677877 888888765443 6788
Q ss_pred EeC-CCCCcceEE
Q psy5751 200 ANK-EGERAPSIA 211 (232)
Q Consensus 200 ~~~-~g~~~~~i~ 211 (232)
++. .|+..+.+.
T Consensus 364 ~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 364 HDLATGALLKIFP 376 (710)
T ss_dssp EETTTCCEEEEEC
T ss_pred EECCCCCEEEecC
Confidence 887 465445444
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.48 E-value=1.5e-05 Score=68.48 Aligned_cols=195 Identities=12% Similarity=0.026 Sum_probs=122.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC--C--CCeEEEEeC--CCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS--Q--MDTISMANL--NDD 76 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~--~--~~~I~~~~~--~g~ 76 (232)
.++++.+..+.|.++...++ .+....+++.....+.........+++..+. +.+|+++. . ...|+.++. +|.
T Consensus 25 ~~~~~~~DG~~la~~s~~~g-~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 25 YSLQGVVDGDKLLVVGFSEG-SVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEETTTEEEEEEEETT-EEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred heeecCCCCCeEEEEEccCC-ceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 47788887788877765444 4544556666543433322235566677664 77888875 2 237888888 665
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC---
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--- 153 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--- 153 (232)
.. .+ .........++.|..+.++++.... ..+...++++...+.+.... . ..+++++++.+|+++...
T Consensus 103 ~~-~l--~~~~~~~~~~~s~dg~~~~~~s~~~--~~~~l~d~~~g~~~~l~~~~-~---~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 103 EQ-RL--EAVKPMRILSGVDTGEAVVFTGATE--DRVALYALDGGGLRELARLP-G---FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp CE-EC--TTSCSBEEEEEEECSSCEEEEEECS--SCEEEEEEETTEEEEEEEES-S---CEEEEEEETTEEEEEEEEETT
T ss_pred cc-cc--cCCCCceeeeeCCCCCeEEEEecCC--CCceEEEccCCcEEEeecCC-C---ceEEECCCCCEEEEEEEcCCC
Confidence 54 22 1233344566776565555554332 23446677777666665553 2 889999998898866432
Q ss_pred CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCC-CcEEEEeCCCCCcc
Q psy5751 154 SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKT-NRIESANKEGERAP 208 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~-~~i~~~~~~g~~~~ 208 (232)
...|+.++++++..+.+........++++. +..|+.++... ..|+.++.++...+
T Consensus 174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 256999999888777665555555777773 55677444432 27899998876655
No 153
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.48 E-value=0.00025 Score=56.17 Aligned_cols=190 Identities=8% Similarity=0.023 Sum_probs=117.9
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
.++|++..+.|..+ ..++ .|..++++.......+......+..+++.+.++.|. +-...+.|...++........+.
T Consensus 127 ~~~~spdg~~l~~g-~~dg-~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la-sg~~dg~i~iwd~~~~~~~~~~~ 203 (321)
T 3ow8_A 127 TLAFSPDSQYLATG-THVG-KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDIATGKLLHTLE 203 (321)
T ss_dssp CEEECTTSSEEEEE-CTTS-EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEECCCCCEEEEE-cCCC-cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE-EEcCCCeEEEEECCCCcEEEEEc
Confidence 46777755555443 3445 788888876554444444445678899998666665 44456789999987665444444
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
........++++|....|..+.. .+.|...++........+... ......+++++++..|+ +-...+.|...+++
T Consensus 204 ~h~~~v~~l~~spd~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~-s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 204 GHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHANLAGTLSGH-ASWVLNVAFCPDDTHFV-SSSSDKSVKVWDVG 278 (321)
T ss_dssp CCSSCCCEEEECTTSCEEEEECT---TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEE-EEETTSCEEEEETT
T ss_pred ccCCceeEEEEcCCCCEEEEEcC---CCeEEEEECCCcceeEEEcCC-CCceEEEEECCCCCEEE-EEeCCCcEEEEeCC
Confidence 44556789999985554444432 456888888766544443332 45578899999866655 44557788888887
Q ss_pred CCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751 164 NRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 164 g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~ 201 (232)
.... ..+........++++. ++...++-...+.|...+
T Consensus 279 ~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 279 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 6543 3333334445677874 444444444455555443
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.47 E-value=3.1e-06 Score=72.70 Aligned_cols=189 Identities=9% Similarity=-0.020 Sum_probs=118.0
Q ss_pred EEEEeCCCCEEEEEEc--CCC-CcEEEEEc--CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 4 GITVDCVEGQVYYSSV--ADK-SSIKRAHL--DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~--~~~-~~i~~~~~--~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
++.|++. +.+|+++. ... .+|+.++. +|... .+ .........++.+.++.++++....+.+...++++...
T Consensus 69 ~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~ 144 (582)
T 3o4h_A 69 DPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL 144 (582)
T ss_dssp EECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-EC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE
T ss_pred cccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cc--cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE
Confidence 4566664 67788876 111 26888888 66554 22 22233445566666666666655545555778887766
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-Cc
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KS 156 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~ 156 (232)
+.+..... .+++++|.++.|+++..... ...|++.++++...+.+... ......+++++++..|+.++... ..
T Consensus 145 ~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~--~~~~~~~~~SpDG~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 145 RELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG--EGSFSSASISPGMKVTAGLETAREAR 219 (582)
T ss_dssp EEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS--SCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred EEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC--CCccccceECCCCCEEEEccCCCeeE
Confidence 66654222 78899998888886654321 25699999988777755433 34568899999988898555432 38
Q ss_pred EEEEecCCCceEEEecCC-CceEEEE--------EE-CCEEEEEeCCCCcEEEEeC
Q psy5751 157 LECMTIRNRVRRKVYSNC-TYPFGLS--------IT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~~~-~~p~gla--------~~-~~~ly~td~~~~~i~~~~~ 202 (232)
|+.++++++..+ +.... ..+.+++ +. ++.+|++-...+.+.....
T Consensus 220 i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 220 LVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 999999988776 43322 2222333 53 4467766555555555554
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.46 E-value=1.1e-05 Score=65.22 Aligned_cols=179 Identities=8% Similarity=-0.002 Sum_probs=112.2
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEee-cCCeEEEEeCC-----CCeEEEEeCCCCCCEEEEeCCC-CCceEEEEeC
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDW-VNRVLYWTDSQ-----MDTISMANLNDDQPKVIVSKDL-VNPRGIVVHP 96 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~iavd~ 96 (232)
.|+++++.+.....+... ......+++.+ .++.|.++... ..+|+.++.++...+.+..... ......+.+|
T Consensus 169 ~l~~~d~~~g~~~~l~~~-~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQE-NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp EEEEEETTTCCEEEEEEE-SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECT
T ss_pred eEEEEECCCCceEEeecC-CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECC
Confidence 688899887665555443 34567888988 77777666543 4589999999887766654221 1244678998
Q ss_pred CCCeEEEEEcCCCCC--cEEEEeCCCCCcEEEEEcCC----CCCcceEEEeCCCCEEEEEE--------CCCCcEEEEec
Q psy5751 97 YYRKLFWSDWNRSGP--KIEWSNLDGTDREIFLKAAD----LKLPNSLAVDFRTDELCWVD--------ADSKSLECMTI 162 (232)
Q Consensus 97 ~~~~ly~~d~~~~~~--~I~~~~~~g~~~~~~~~~~~----~~~p~~l~~d~~~~~Ly~~d--------~~~~~i~~~~~ 162 (232)
.++.|++........ .|+++++++...+.+..... ...+.++++++++.+|+++- .....|+.+++
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 777776654322233 49999999887666544320 02266778888888888763 44668999999
Q ss_pred CCCceEEEecCCC-----------ceEEEEE--ECCEEEEEeCCC--CcEEEEeCC
Q psy5751 163 RNRVRRKVYSNCT-----------YPFGLSI--TDEKYYWTDWKT--NRIESANKE 203 (232)
Q Consensus 163 ~g~~~~~~~~~~~-----------~p~gla~--~~~~ly~td~~~--~~i~~~~~~ 203 (232)
+++..+.+..... ....+++ ++..|+++.... ..|+.++..
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 328 KNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp TTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 9877666644322 2344566 355777765432 345555543
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.45 E-value=5.3e-05 Score=66.44 Aligned_cols=202 Identities=11% Similarity=0.070 Sum_probs=124.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCC-----CceeEEEeCCCC--------------CccEEEEeecCCeEEEEeC-
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDG-----KNVEDVITTNIR--------------SPEGLTFDWVNRVLYWTDS- 63 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-----~~~~~~~~~~~~--------------~p~gl~~d~~~~~ly~~d~- 63 (232)
+++|++..+.|+++. ++ .|+.+++++ .....+...... .+.++++.+.++.|+++..
T Consensus 125 ~~~~SpdG~~la~~~--~~-~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 125 SLDFSPVGDRVAYVR--NH-NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp TCEECTTSSEEEEEE--TT-EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred CCcCCCCCCEEEEEE--CC-eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence 356888777777753 34 789988876 443333222211 2478999988888888751
Q ss_pred -------------------------------CCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCC--
Q psy5751 64 -------------------------------QMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNR-- 108 (232)
Q Consensus 64 -------------------------------~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~-- 108 (232)
....|++.++++.....+.. .....+..++.+|.++.|+++....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 281 (706)
T 2z3z_A 202 QSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ 281 (706)
T ss_dssp CTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS
T ss_pred CCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC
Confidence 23578888988765433332 1223457889999777788865432
Q ss_pred CCCcEEEEeCCCC-CcEEEEEcCCC---CCcceEEEeC--CCCEEEEEECC-CCcEEEEecCCCceEEEecCCCceEE-E
Q psy5751 109 SGPKIEWSNLDGT-DREIFLKAADL---KLPNSLAVDF--RTDELCWVDAD-SKSLECMTIRNRVRRKVYSNCTYPFG-L 180 (232)
Q Consensus 109 ~~~~I~~~~~~g~-~~~~~~~~~~~---~~p~~l~~d~--~~~~Ly~~d~~-~~~i~~~~~~g~~~~~~~~~~~~p~g-l 180 (232)
....|+..++++. ....+...... .....+++++ +++.||.++.. ..+|+.++.++...+.+........+ +
T Consensus 282 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~ 361 (706)
T 2z3z_A 282 NECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFA 361 (706)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEE
T ss_pred CeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeee
Confidence 2247888888876 44444432101 1236789998 75555555332 35788888777655555333222233 5
Q ss_pred EEE--CCEEEEEeCCCC----cEEEEeCCCCCcc
Q psy5751 181 SIT--DEKYYWTDWKTN----RIESANKEGERAP 208 (232)
Q Consensus 181 a~~--~~~ly~td~~~~----~i~~~~~~g~~~~ 208 (232)
++. ++.||++....+ .|++++..+...+
T Consensus 362 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 395 (706)
T 2z3z_A 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK 395 (706)
T ss_dssp EECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE
T ss_pred EEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce
Confidence 663 567888876654 8888888765544
No 157
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.43 E-value=0.00073 Score=59.99 Aligned_cols=196 Identities=11% Similarity=-0.002 Sum_probs=131.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++....|..+. .++ .|...++........+......+.++++.+.++.|..+.. .+.|.+.++........
T Consensus 16 v~~i~~sp~~~~la~~~-~~g-~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTL-YSG-RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp EEEEEECSSSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-TSEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEEEe-CCC-EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcEEEE
Confidence 45899999777777665 345 7899998765544444444567899999997777776654 68999999887665555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+.........++++|.+..|..+.. .+.|...+++.... ...+... -.....+++++.++.++++-...+.|...
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEET---TSEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred EecCCCCEEEEEEeCCCCEEEEEcC---CCEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 5556667889999996666766553 45688888876533 2233322 45678999999446566666667889998
Q ss_pred ecCCCceE-EEecCC-CceEEEEEE---CCEEEEEeCCCCcEEEEeCCC
Q psy5751 161 TIRNRVRR-KVYSNC-TYPFGLSIT---DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 161 ~~~g~~~~-~~~~~~-~~p~gla~~---~~~ly~td~~~~~i~~~~~~g 204 (232)
+++..... .+.... .....+++. ++.++++-...+.|...+...
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 217 (814)
T 3mkq_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (814)
T ss_dssp ETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT
T ss_pred ECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 88755443 332222 444566663 455555655667787777653
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.41 E-value=0.0002 Score=63.15 Aligned_cols=201 Identities=9% Similarity=0.053 Sum_probs=125.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC----------------CccEEEEeecCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR----------------SPEGLTFDWVNRVLYWTDSQM 65 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~----------------~p~gl~~d~~~~~ly~~d~~~ 65 (232)
+..++|.+..+.|.++.. + .|+.+++++.....+...... .+.++++.+.++.|+++....
T Consensus 154 ~~~~~~SPDG~~la~~~~--~-~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 154 ATDAKLSPKGGFVSFIRG--R-NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp EEEEEECTTSSEEEEEET--T-EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred cccccCCCCCCEEEEEeC--C-cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 357889998888877763 4 799999987654333322111 157789999888888874322
Q ss_pred --------------------------------CeEEEEeCCC-CCCEEEEeC--CCCCceEEEEeCCCCeEEEEEc--CC
Q psy5751 66 --------------------------------DTISMANLND-DQPKVIVSK--DLVNPRGIVVHPYYRKLFWSDW--NR 108 (232)
Q Consensus 66 --------------------------------~~I~~~~~~g-~~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~--~~ 108 (232)
..|+++++++ .....+... ....+..++. |.+..|+++.. ..
T Consensus 231 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~ 309 (741)
T 2ecf_A 231 SPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ 309 (741)
T ss_dssp TTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS
T ss_pred CCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC
Confidence 1788888887 665544321 2234567888 87788887653 22
Q ss_pred CCCcEEEEeCCCCCcEEEEEcCCCC---CcceEEEeCCCCEEEEEECCC--CcEEEEecCCCceEEEecCCCceEEE-EE
Q psy5751 109 SGPKIEWSNLDGTDREIFLKAADLK---LPNSLAVDFRTDELCWVDADS--KSLECMTIRNRVRRKVYSNCTYPFGL-SI 182 (232)
Q Consensus 109 ~~~~I~~~~~~g~~~~~~~~~~~~~---~p~~l~~d~~~~~Ly~~d~~~--~~i~~~~~~g~~~~~~~~~~~~p~gl-a~ 182 (232)
....|+..++++.....+....... ....+++++++. ++++.... .+|+.++.+|. .+.+.........+ ++
T Consensus 310 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~ 387 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAV 387 (741)
T ss_dssp SEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEE
T ss_pred CeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEE
Confidence 2457888998877766555432111 336889999866 55554444 47999888876 44443332233354 35
Q ss_pred E--CCEEEEEeCCC----CcEEEEeCCCCCcc
Q psy5751 183 T--DEKYYWTDWKT----NRIESANKEGERAP 208 (232)
Q Consensus 183 ~--~~~ly~td~~~----~~i~~~~~~g~~~~ 208 (232)
. ++.||++-... ..|++++.+|...+
T Consensus 388 s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 388 DEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp ETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred eCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 3 55777765433 35777776665444
No 159
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.40 E-value=6.5e-05 Score=60.23 Aligned_cols=147 Identities=15% Similarity=0.128 Sum_probs=96.2
Q ss_pred EEEEEEcC--CCCcEEEEEcC--CCceeEE------EeCCCCCccEEEE--eecCC--eEEEEeCCCCeEEEEeC----C
Q psy5751 13 QVYYSSVA--DKSSIKRAHLD--GKNVEDV------ITTNIRSPEGLTF--DWVNR--VLYWTDSQMDTISMANL----N 74 (232)
Q Consensus 13 ~ly~~d~~--~~~~i~~~~~~--g~~~~~~------~~~~~~~p~gl~~--d~~~~--~ly~~d~~~~~I~~~~~----~ 74 (232)
.+|.++-. .+ +|..+.++ ......+ +...+..|.|+++ ++..+ .+|+++.. +++..+.+ +
T Consensus 88 la~as~R~~~~n-~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~ 165 (355)
T 3amr_A 88 IAAASNRSEGKN-TIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKN 165 (355)
T ss_dssp EEEEEECSTTCC-EEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTT
T ss_pred EEEEeCCCCCCC-eEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCC
Confidence 45777776 67 78777664 2233233 1244589999999 66555 37767765 77777554 2
Q ss_pred CCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC---cEEEEEc--CCC-CCcceEEEeCCC--
Q psy5751 75 DDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD---REIFLKA--ADL-KLPNSLAVDFRT-- 144 (232)
Q Consensus 75 g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~---~~~~~~~--~~~-~~p~~l~~d~~~-- 144 (232)
|.....++. .-...|.++++|+..++||+++.. .-|++++.+... .+.+... ..+ ..+.||++.+..
T Consensus 166 g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd---~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 166 GYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED---EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG 242 (355)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT---TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG
T ss_pred CcccceEEEEecCCCCcceEEEcCCCCeEEEeccc---ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC
Confidence 222222222 234589999999999999999965 239999965332 2333221 113 378999997543
Q ss_pred -CEEEEEECCCCcEEEEecCC
Q psy5751 145 -DELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 145 -~~Ly~~d~~~~~i~~~~~~g 164 (232)
++|++++.+.+....++..+
T Consensus 243 ~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp CEEEEEEEGGGTEEEEEESST
T ss_pred CEEEEEEcCCCCEEEEEECCC
Confidence 58999998888888888864
No 160
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.39 E-value=0.00043 Score=54.83 Aligned_cols=215 Identities=10% Similarity=0.055 Sum_probs=133.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++++.+.... ..+-..++ .|...++........+.........+++.+.++.|. +....+.|...++........+
T Consensus 84 ~~~~~~~~~~~-l~s~s~D~-~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 84 VSVDISHTLPI-AASSSLDA-HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEYSL 160 (321)
T ss_dssp EEEEECSSSSE-EEEEETTS-EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEEEE
T ss_pred EEEEECCCCCE-EEEEeCCC-cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeEEe
Confidence 45667664443 34444455 788888876554344444445677899998666554 6666789999998877666555
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
.........++++|.+..|..... .+.|...++........+... ......+++++++..| .+-...+.|...++
T Consensus 161 ~~~~~~v~~~~~spdg~~lasg~~---dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spd~~~l-~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 161 DTRGKFILSIAYSPDGKYLASGAI---DGIINIFDIATGKLLHTLEGH-AMPIRSLTFSPDSQLL-VTASDDGYIKIYDV 235 (321)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCCCEEEECTTSCEE-EEECTTSCEEEEET
T ss_pred cCCCceEEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEccc-CCceeEEEEcCCCCEE-EEEcCCCeEEEEEC
Confidence 555566789999996666655553 356888888755433333321 3456899999985555 45566788888888
Q ss_pred CCCceEEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEEcC
Q psy5751 163 RNRVRRKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER-APSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 163 ~g~~~~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
+....... .........+++. ++...++-...+.|...+..... ...+ ........+|++-++
T Consensus 236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~---~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF---FDHQDQVWGVKYNGN 301 (321)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTT
T ss_pred CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE---cCCCCcEEEEEECCC
Confidence 76554333 3334445678874 45555555556778877765322 2222 123344566665443
No 161
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=0.00075 Score=55.88 Aligned_cols=197 Identities=8% Similarity=-0.063 Sum_probs=124.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeE----EEeCCCCCccEEEEeec---CCeEEEEeCCCCeEEEEeCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVED----VITTNIRSPEGLTFDWV---NRVLYWTDSQMDTISMANLN 74 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~----~~~~~~~~p~gl~~d~~---~~~ly~~d~~~~~I~~~~~~ 74 (232)
+.+++|++.+..|+.++. ++ .|+.+++....... .+......+..+++.+. ++.|+ +-...+.|...++.
T Consensus 152 v~~~~~sp~~~~l~~~~~-~g-~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 152 PNAISIAEDDTTVIIADK-FG-DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEECTTSSEEEEEET-TS-EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEES
T ss_pred ceEEEEcCCCCEEEEEeC-CC-cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEECC
Confidence 458899998888887765 34 68888886543221 22223357888999986 44444 55556889999987
Q ss_pred CCCCEEE-EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc------------------------
Q psy5751 75 DDQPKVI-VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA------------------------ 129 (232)
Q Consensus 75 g~~~~~~-~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~------------------------ 129 (232)
....... .......+..++++ ..+.|+.... .+.|...++........+..
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG---DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND 304 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEES---SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeC---CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence 6554433 43455667889998 5666665553 45788888876553333321
Q ss_pred CCCCCcceEEEeCCCCEEEEEECCCCcEEEEec--CCC-ceEEE--ecCCCceEEEEEECCEEEEEeCCC-------C--
Q psy5751 130 ADLKLPNSLAVDFRTDELCWVDADSKSLECMTI--RNR-VRRKV--YSNCTYPFGLSITDEKYYWTDWKT-------N-- 195 (232)
Q Consensus 130 ~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~--~g~-~~~~~--~~~~~~p~gla~~~~~ly~td~~~-------~-- 195 (232)
..-....++++.+++..||.+....+.|...++ ... ....+ ...-..+.++++..+.++++-... +
T Consensus 305 ~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 305 IIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSE
T ss_pred cceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcce
Confidence 001245688999988889888767787877777 322 22222 222366789999877777774432 2
Q ss_pred cEEEEeCCCC
Q psy5751 196 RIESANKEGE 205 (232)
Q Consensus 196 ~i~~~~~~g~ 205 (232)
.++.++..+.
T Consensus 385 ~v~~~~~~~~ 394 (450)
T 2vdu_B 385 KFIEYNLNEN 394 (450)
T ss_dssp EEEEEETTTT
T ss_pred EEEEEEcCCC
Confidence 5666665543
No 162
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.35 E-value=8.4e-05 Score=65.15 Aligned_cols=199 Identities=9% Similarity=0.041 Sum_probs=119.1
Q ss_pred EEEEEeCCCCEEEEEEcC-------------------------------CCCcEEEEEcCCCceeEEEeC--CCCCccEE
Q psy5751 3 IGITVDCVEGQVYYSSVA-------------------------------DKSSIKRAHLDGKNVEDVITT--NIRSPEGL 49 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~-------------------------------~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl 49 (232)
.++.|++.++.|+++... ....|+.+++++.....+... .-..+..+
T Consensus 184 ~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 263 (706)
T 2z3z_A 184 KGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNL 263 (706)
T ss_dssp CSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEE
T ss_pred ceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeE
Confidence 578899988888887621 112688888887654333221 11345678
Q ss_pred EEeecCCeEEEEeCCC----CeEEEEeCCCC-CCEEEEeC-CC---CCceEEEEeC--CCCeEEEEEcCCCCCcEEEEeC
Q psy5751 50 TFDWVNRVLYWTDSQM----DTISMANLNDD-QPKVIVSK-DL---VNPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNL 118 (232)
Q Consensus 50 ~~d~~~~~ly~~d~~~----~~I~~~~~~g~-~~~~~~~~-~~---~~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~ 118 (232)
++.+.++.|+++.... ..|+.+++.+. ....+... .. ....++++.| .++.||.+... +..+|+.++.
T Consensus 264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~ 342 (706)
T 2z3z_A 264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD-GWNHLYLYDT 342 (706)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT-SSCEEEEEET
T ss_pred EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC-CccEEEEEEC
Confidence 8888788888854332 37889998876 44444431 11 1235678887 55555444433 3567888887
Q ss_pred CCCCcEEEEEcCCCCCcce-EEEeCCCCEEEEEECCCC----cEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEe
Q psy5751 119 DGTDREIFLKAADLKLPNS-LAVDFRTDELCWVDADSK----SLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD 191 (232)
Q Consensus 119 ~g~~~~~~~~~~~~~~p~~-l~~d~~~~~Ly~~d~~~~----~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td 191 (232)
++.....+... ...... +++++++++||++....+ +|+.++.+++..+.+. .......+++. +..+.++.
T Consensus 343 ~~~~~~~l~~~--~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~spdg~~l~~~~ 419 (706)
T 2z3z_A 343 TGRLIRQVTKG--EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT-PESGMHRTQLSPDGSAIIDIF 419 (706)
T ss_dssp TSCEEEECCCS--SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC-CSSSEEEEEECTTSSEEEEEE
T ss_pred CCCEEEecCCC--CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc-CCCceEEEEECCCCCEEEEEe
Confidence 77654444222 122334 799999889999877654 8999999876644433 23334555653 33444442
Q ss_pred CCC---CcEEEEeCCCC
Q psy5751 192 WKT---NRIESANKEGE 205 (232)
Q Consensus 192 ~~~---~~i~~~~~~g~ 205 (232)
... ..|+..+..+.
T Consensus 420 ~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 420 QSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp ECSSCSCEEEEEESSSC
T ss_pred cCCCCCcEEEEEECCCC
Confidence 211 34666665543
No 163
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.35 E-value=0.00042 Score=56.39 Aligned_cols=196 Identities=10% Similarity=0.011 Sum_probs=119.1
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee----EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC----
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE----DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD---- 76 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~----~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~---- 76 (232)
+++++....++++...++ .|..++++..... ..+......+.++++.+..+.++++-...+.|...++...
T Consensus 40 ~~~~~~~~~~~~~~~~~g-~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGG-AFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp EEECSSEEEEEBCCSSSC-CEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred EEECCCeEEEEEEEcCCC-EEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 345543333333334445 7888888654221 1122234567888998733445555556688999998765
Q ss_pred ---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-cCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 77 ---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-AADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 77 ---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
.....+.........++++|....++++-.. .+.|...++........+. ...-.....+++++++..|+.+ .
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 195 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS-C 195 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET--TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE-E
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC--CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE-e
Confidence 2333444466678899999865344444332 3568888887654433331 2224467899999976666555 4
Q ss_pred CCCcEEEEecCCCceEEEe-cC--CCceEEEEEE-CCEEEEEe---CCCCcEEEEeCCC
Q psy5751 153 DSKSLECMTIRNRVRRKVY-SN--CTYPFGLSIT-DEKYYWTD---WKTNRIESANKEG 204 (232)
Q Consensus 153 ~~~~i~~~~~~g~~~~~~~-~~--~~~p~gla~~-~~~ly~td---~~~~~i~~~~~~g 204 (232)
..+.|...+++........ .. ...+..+++. ++.++.+- ...+.|...+...
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 5788999998865543332 22 2235677774 66766665 5678888888774
No 164
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.34 E-value=0.0007 Score=55.15 Aligned_cols=195 Identities=10% Similarity=0.030 Sum_probs=129.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCC-CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDG-KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.+++++. +.|+. -..++ .|...++.. ......+......+.++++.+.++.|+ +-...+.|...++........
T Consensus 180 ~~~~~~~--~~l~~-~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 180 GCLSWNR--HVLSS-GSRSG-AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLA-SGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp EEEEEET--TEEEE-EETTS-EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTCSSEEEE
T ss_pred EEEEECC--CEEEE-EcCCC-CEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEE-EEeCCCeEEEccCCCCCccEE
Confidence 3566643 44443 33445 788888873 333333444456788999988555554 555567899999987665555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC-CCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~-~~~~i~~~ 160 (232)
+.........++++|.+..++.+..+...+.|...++........+.. -.....+++++++..|+.+.. ..+.|...
T Consensus 255 ~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 255 KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEE
T ss_pred ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEE
Confidence 555566778999999777888876533367799999876655444443 456889999998777777643 56788888
Q ss_pred ecCCCceEEEe---cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 161 TIRNRVRRKVY---SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 161 ~~~g~~~~~~~---~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
++......... ........+++. ++...++-...+.|...+...
T Consensus 333 ~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 333 SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 88765443332 234445678885 455555656678888888763
No 165
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.34 E-value=0.00075 Score=55.31 Aligned_cols=193 Identities=10% Similarity=0.040 Sum_probs=121.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++....|. +-..++ .|...++........+......+.++++.+.++ +..+-...+.|...++.+......+
T Consensus 112 ~~~~~~p~~~~l~-s~s~Dg-~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 112 TRVIFHPVFSVMV-SASEDA-TIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp EEEEECSSSSEEE-EEESSS-CEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCEEECC
T ss_pred EEEEEcCCCCEEE-EEeCCC-eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEE
Confidence 4788988555544 444455 799999886655455554456788999988555 4456666688888998776544434
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
.........++++|.+..|+.+.. .+.|...++........+... ......+++++++ .++.+-...+.|...++
T Consensus 189 ~~h~~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 189 HGHDHNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDG-TLIASCSNDQTVRVWVV 263 (410)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCC-CccEEEEEECCCC-CEEEEEcCCCeEEEEEC
Confidence 445556789999985555554443 456888888765543333332 4456788888874 44455556777888888
Q ss_pred CCCceEEEe-cCCCceEEEEEEC---------------------CEEEEEeCCCCcEEEEeCC
Q psy5751 163 RNRVRRKVY-SNCTYPFGLSITD---------------------EKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 163 ~g~~~~~~~-~~~~~p~gla~~~---------------------~~ly~td~~~~~i~~~~~~ 203 (232)
......... ........+++.. +.+.++-...+.|...+..
T Consensus 264 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 765443332 2233334555532 4455665666777777765
No 166
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.34 E-value=0.00061 Score=54.29 Aligned_cols=215 Identities=9% Similarity=-0.020 Sum_probs=126.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.+++|++..+.|+.+. .++ .|..+++++.. ....+......+.++++.+.++.|+.+. ..+.|...++.......
T Consensus 12 ~~~~~s~~~~~l~~~~-~d~-~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICP-NNH-EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CEEEECTTSSEEEEEC-SSS-EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEE
T ss_pred EEEEECCCCCEEEEEe-CCC-EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeee
Confidence 4788998666665553 345 78888888764 3233434446788999998666666444 55788888886654332
Q ss_pred EE--eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE---EEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 81 IV--SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE---IFLKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 81 ~~--~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~---~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
.. ......+..++++|....|+.+.. .+.|...+++..... .............+++++++..|+.+ ...+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg 164 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSG---SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG-SCDF 164 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEET---TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE-ETTS
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeC---CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE-cCCC
Confidence 22 234556789999986666666654 345766666655421 11112113457899999986655544 4567
Q ss_pred cEEEEecC-------------------CCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751 156 SLECMTIR-------------------NRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDM 214 (232)
Q Consensus 156 ~i~~~~~~-------------------g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~ 214 (232)
.|...++. +.....+........++++. ++.++++-...+.|...+.. +.....+.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--- 241 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA--- 241 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE---
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc---
Confidence 77777753 12222222233445678874 44444444456778888876 44333332
Q ss_pred CCcceeEEEEEEc
Q psy5751 215 MGTTYMYGIAAVP 227 (232)
Q Consensus 215 ~~~~~p~gi~~~~ 227 (232)
.....+..+++.+
T Consensus 242 ~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 242 SETLPLLAVTFIT 254 (372)
T ss_dssp CSSCCEEEEEEEE
T ss_pred cCCCCeEEEEEec
Confidence 2222345555543
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.28 E-value=0.0011 Score=54.43 Aligned_cols=216 Identities=9% Similarity=0.029 Sum_probs=131.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++.++.|. +-..++ .|...++++......+......+.++++.+.++.|+ +-...+.|...++....+...+
T Consensus 154 ~~v~~~~~~~~l~-sgs~D~-~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~-s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 154 QDISFDHSGKLLA-SCSADM-TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp EEEEECTTSSEEE-EEETTS-CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCEEE-EEeCCC-eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEE
Confidence 4788888555544 443445 688888876543233333345778899988665554 5556789999998876655555
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC------------------
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT------------------ 144 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~------------------ 144 (232)
.........++.++ ++.++.+-.. .+.|...++........+... ......+++++..
T Consensus 231 ~~h~~~v~~~~~~~-~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (410)
T 1vyh_C 231 TGHREWVRMVRPNQ-DGTLIASCSN--DQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGK 306 (410)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEET--TSCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred eCCCccEEEEEECC-CCCEEEEEcC--CCeEEEEECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCC
Confidence 55556678888887 4444444432 355777887765544333322 3456677887742
Q ss_pred -CEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751 145 -DELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM 220 (232)
Q Consensus 145 -~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p 220 (232)
+.+.++-...+.|...++..+.. ..+........++++. ++...++-...+.|...+.. +.....+. .+....
T Consensus 307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~---~h~~~v 383 (410)
T 1vyh_C 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFV 383 (410)
T ss_dssp -CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE---CCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc---CCCCcE
Confidence 34555656678888888876543 3333344456688885 45555565666778888876 33334332 233345
Q ss_pred EEEEEEcC
Q psy5751 221 YGIAAVPS 228 (232)
Q Consensus 221 ~gi~~~~~ 228 (232)
..+++-++
T Consensus 384 ~~l~~~~~ 391 (410)
T 1vyh_C 384 TSLDFHKT 391 (410)
T ss_dssp EEEEECSS
T ss_pred EEEEEcCC
Confidence 66665443
No 168
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.26 E-value=0.00097 Score=53.46 Aligned_cols=216 Identities=11% Similarity=0.012 Sum_probs=133.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE----EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV----ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~----~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
.+++|.+ ++.|..+. .++ .|...+++....... .......+..|++.+.++.|. +-...+.|...++.....
T Consensus 86 ~~~~~s~-d~~l~~~s-~dg-~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~-sgs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 86 ADLTWVG-ERGILVAS-DSG-AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAV-SGSKDICIKVWDLAQQVV 161 (344)
T ss_dssp EEEEEET-TTEEEEEE-TTS-EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEE
T ss_pred EEEEEeC-CCeEEEEE-CCC-EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCcE
Confidence 4688887 46665444 445 788888875432111 222345788999998666555 555667899999887665
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-cCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-AADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
...+..+......+++.+.+..++.+-.. .+.|...++........+. ......+..+++++.++.++.+-...+.|
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSE--DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEET--TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeecc--ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 55555556677899999866667666543 3568888876554333221 11134567899999878777776677888
Q ss_pred EEEecCCCce-EEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751 158 ECMTIRNRVR-RKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 158 ~~~~~~g~~~-~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
...++...+. ..+........++++. +..+..+-...+.|...+...... +.+ ..+......|+.-+
T Consensus 240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~--~~~-~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL--FRS-QAHRDFVRDATWSP 309 (344)
T ss_dssp EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE--EEE-CCCSSCEEEEEECS
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE--EEE-cCCCCCEEEEEEeC
Confidence 8888875543 3333344445677774 335556655667777777664432 222 23344456666543
No 169
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.26 E-value=0.00013 Score=63.95 Aligned_cols=199 Identities=9% Similarity=-0.025 Sum_probs=117.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC------------------CccEEEEeecCCeEEEEeCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR------------------SPEGLTFDWVNRVLYWTDSQM 65 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~------------------~p~gl~~d~~~~~ly~~d~~~ 65 (232)
.++|++..+.|.++.. + .|+.+++++.....+...... ...++++.+.++.|+++....
T Consensus 118 ~~~~SPdG~~la~~~~--~-~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE--N-NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp BCCBCSSTTCEEEEET--T-EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred ccEECCCCCEEEEEEC--C-eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 4567777777766654 4 789998887655444433221 236788988888887764221
Q ss_pred ---------------------------------CeEEEEeCCCCCCEEEEeCC------CCCceEEEEeCCCCeEEEE-E
Q psy5751 66 ---------------------------------DTISMANLNDDQPKVIVSKD------LVNPRGIVVHPYYRKLFWS-D 105 (232)
Q Consensus 66 ---------------------------------~~I~~~~~~g~~~~~~~~~~------~~~p~~iavd~~~~~ly~~-d 105 (232)
..|++.++++......+... ......++.+|.+..|+.. +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 274 (723)
T 1xfd_A 195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN 274 (723)
T ss_dssp TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE
T ss_pred CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc
Confidence 16777888776542222211 2234568899855555333 3
Q ss_pred cCCCCCcEEEEeCCCCCcEEEEEcCCCCC----cceEEEeCCCCEEEEE-ECCCC------cEEEEe-cCCCc---eEEE
Q psy5751 106 WNRSGPKIEWSNLDGTDREIFLKAADLKL----PNSLAVDFRTDELCWV-DADSK------SLECMT-IRNRV---RRKV 170 (232)
Q Consensus 106 ~~~~~~~I~~~~~~g~~~~~~~~~~~~~~----p~~l~~d~~~~~Ly~~-d~~~~------~i~~~~-~~g~~---~~~~ 170 (232)
.......|+..++++.....+........ +..+++++++..|+++ ....+ +|+.++ .+++. .+.+
T Consensus 275 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l 354 (723)
T 1xfd_A 275 RAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSI 354 (723)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBS
T ss_pred CCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEe
Confidence 22234568888988776555543210111 2478999998888886 44333 788888 56555 4433
Q ss_pred ecC-CCceEEEEE--ECCEEEEEeCC----CCcEEEEeCCCC
Q psy5751 171 YSN-CTYPFGLSI--TDEKYYWTDWK----TNRIESANKEGE 205 (232)
Q Consensus 171 ~~~-~~~p~gla~--~~~~ly~td~~----~~~i~~~~~~g~ 205 (232)
... ......+++ ++..||++... ...|++++..|.
T Consensus 355 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 355 TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 322 111222466 36688877543 356888887654
No 170
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.25 E-value=2.2e-05 Score=66.60 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=83.5
Q ss_pred CCCCccEEEEeecCCeEEEEeCC---------------------CCeEEEEeCCCCCC-------EEEEe----------
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQ---------------------MDTISMANLNDDQP-------KVIVS---------- 83 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~---------------------~~~I~~~~~~g~~~-------~~~~~---------- 83 (232)
.+..|+++++++.++.||++-+. .++|++...++... ..++.
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 45689999999999999998543 27899987755321 22221
Q ss_pred -----------CCCCCceEEEEeCCCCeEEE-EEcCC---------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751 84 -----------KDLVNPRGIVVHPYYRKLFW-SDWNR---------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 84 -----------~~~~~p~~iavd~~~~~ly~-~d~~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~ 142 (232)
..++.|.+|++|+ .|.||+ +|... ....+++.+.+......++.......|+|+++++
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP 540 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred cccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC
Confidence 1378999999998 789999 77531 2347899988766677666654356799999999
Q ss_pred CCCEEEEEECCCC
Q psy5751 143 RTDELCWVDADSK 155 (232)
Q Consensus 143 ~~~~Ly~~d~~~~ 155 (232)
+...||++-.+-+
T Consensus 541 D~ktLfV~vQHPG 553 (592)
T 4a9v_A 541 DQKTLFVGIQHPG 553 (592)
T ss_dssp TSSEEEEEEESTT
T ss_pred CCCEEEEEEeCCC
Confidence 9999999976544
No 171
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.0003 Score=57.14 Aligned_cols=199 Identities=11% Similarity=0.028 Sum_probs=123.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
..+++|++....|+.+.. ++ .|...++.. ......+......+..+++.+.++.++++-...+.|...++....
T Consensus 70 v~~~~~s~~~~~l~~~~~-dg-~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALD-NG-SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp EEEEEECSSSSCEEEEES-SS-CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred eEEEEECCCCCeEEEEcc-CC-eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 357889886666655543 44 688888875 222223333446788999988645555576677889999987764
Q ss_pred ------CEEEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----CCCcceEEEeCC
Q psy5751 78 ------PKVIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----LKLPNSLAVDFR 143 (232)
Q Consensus 78 ------~~~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----~~~p~~l~~d~~ 143 (232)
..... .........++++|..+.++++... .+.|...++........+.... ......+++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS--SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS--SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC--CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence 22221 1244567899999864666666543 4568888887654433333210 245689999998
Q ss_pred CCEEEEEECCCC---cEEEEecCCC-ce-EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751 144 TDELCWVDADSK---SLECMTIRNR-VR-RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 144 ~~~Ly~~d~~~~---~i~~~~~~g~-~~-~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g 204 (232)
+..++++-...+ .|...+++.. .. ..+. ........+++. ++.++++-...+.|...+...
T Consensus 226 ~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 226 NSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 655555545454 7888888754 22 2222 233445677873 455666656667788888763
No 172
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.23 E-value=0.0001 Score=67.75 Aligned_cols=179 Identities=7% Similarity=0.033 Sum_probs=120.1
Q ss_pred EEEEEe-CCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC-CccEEEEeecCCeEEEEeCCCCeEE-EEeCCCCCCE
Q psy5751 3 IGITVD-CVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR-SPEGLTFDWVNRVLYWTDSQMDTIS-MANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d-~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~-~p~gl~~d~~~~~ly~~d~~~~~I~-~~~~~g~~~~ 79 (232)
.+++|+ +....|.++. .. .|+.+++.+.....+ ..... .+..+++. .++.|+++.. ...|+ ..++++....
T Consensus 299 ~~~~~S~pdG~~la~~~--~~-~i~~~~~~~~~~~~~-~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~ 372 (1045)
T 1k32_A 299 FAEDFSPLDGDLIAFVS--RG-QAFIQDVSGTYVLKV-PEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAE 372 (1045)
T ss_dssp GEEEEEECGGGCEEEEE--TT-EEEEECTTSSBEEEC-SCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEE
T ss_pred ceeeecCCCCCEEEEEE--cC-EEEEEcCCCCceEEc-cCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCce
Confidence 367788 8777776665 34 788888876554332 22112 34555555 4566776655 56888 8898887655
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC------
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD------ 153 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~------ 153 (232)
.+. .....+..++++|.++.|+++.. ...|+..++++.....+.... ......+++++++.+|.++...
T Consensus 373 ~l~-~~~~~~~~~~~SpDG~~la~~~~---~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 373 KFE-ENLGNVFAMGVDRNGKFAVVAND---RFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp ECC-CCCCSEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred Eec-CCccceeeeEECCCCCEEEEECC---CCeEEEEECCCCceEEeccCC-CCCccceEECCCCCeEEEEecCcccccc
Confidence 544 44567789999997777877764 357999999877766665442 3445889999998888777542
Q ss_pred ---CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC
Q psy5751 154 ---SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW 192 (232)
Q Consensus 154 ---~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~ 192 (232)
...|+..+++++....+.........+++. +..||++..
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 258999999877654444445556677773 557887765
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.22 E-value=0.00026 Score=57.11 Aligned_cols=182 Identities=8% Similarity=-0.011 Sum_probs=111.1
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEee-cCCeEEEEeCC-C----CeEEEEeCCCCCCEEEEeCC-CCCceEEEEeC
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDW-VNRVLYWTDSQ-M----DTISMANLNDDQPKVIVSKD-LVNPRGIVVHP 96 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~-~----~~I~~~~~~g~~~~~~~~~~-~~~p~~iavd~ 96 (232)
.|+.+++++.....+.. .......+++.+ .++.|+++... . .+|+.+++++...+.+.... ...+..++++|
T Consensus 169 ~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp EEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT
T ss_pred eEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC
Confidence 68888888765544443 234567778877 56666665433 2 47999999887655554321 22456788998
Q ss_pred CCCeEEEEEcCCCCCc--EEEEeCCCCCcEEEEEcCCCCCcceEEEeC-CCCEEEEEEC---------------CCCcEE
Q psy5751 97 YYRKLFWSDWNRSGPK--IEWSNLDGTDREIFLKAADLKLPNSLAVDF-RTDELCWVDA---------------DSKSLE 158 (232)
Q Consensus 97 ~~~~ly~~d~~~~~~~--I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~-~~~~Ly~~d~---------------~~~~i~ 158 (232)
.++.|+++........ |+..++++.....+.... ... +++++ ++..|+++.. ....|+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 7777777644323344 999999877655554332 223 78888 7665554321 346899
Q ss_pred EEecCCCceEEEecCCC-----------ceEEEEE--ECCEEEEEeCC--CCcEEEEeCCCCCcceE
Q psy5751 159 CMTIRNRVRRKVYSNCT-----------YPFGLSI--TDEKYYWTDWK--TNRIESANKEGERAPSI 210 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~-----------~p~gla~--~~~~ly~td~~--~~~i~~~~~~g~~~~~i 210 (232)
.++++++..+.+..... ....+++ ++..|+++... ...|+.++..+...+++
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 324 VLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred EEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence 99998776655533221 1233455 35577777543 34688888887766644
No 174
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.21 E-value=9.2e-05 Score=60.19 Aligned_cols=159 Identities=12% Similarity=0.002 Sum_probs=104.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------CCCccEEEEeecCCeEEEEeCCCC---eEEEEeC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------IRSPEGLTFDWVNRVLYWTDSQMD---TISMANL 73 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------~~~p~gl~~d~~~~~ly~~d~~~~---~I~~~~~ 73 (232)
.+++|++..+.++++-..++ .|...++........+... ...+..+++.+.+..++++-...+ .|...++
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSN-FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp CEEEECSSCTTEEEEESSSS-CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred eEEEeCCCCCcEEEEEcCCC-CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 47888886456666655666 7999999875543333332 456888999987655666655555 8999998
Q ss_pred CCC-CCEEEEe-CCCCCceEEEEeC-CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751 74 NDD-QPKVIVS-KDLVNPRGIVVHP-YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 74 ~g~-~~~~~~~-~~~~~p~~iavd~-~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
... .....+. .....+..++++| ....|+.... .+.|...++........+... ......+++++++..++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---dg~v~~wd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR---DNTVLLWNPESAEQLSQFPAR-GNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES---SSEEEEECSSSCCEEEEEECS-SSCCCCEEECTTCTTEEEE
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC---CCCEEEeeCCCCccceeecCC-CCceEEEEECCCCCCEEEE
Confidence 764 3323332 3455678999998 4444444442 456888888765544434332 4567899999986466677
Q ss_pred ECCCCcEEEEecCCCc
Q psy5751 151 DADSKSLECMTIRNRV 166 (232)
Q Consensus 151 d~~~~~i~~~~~~g~~ 166 (232)
-...+.|...+++...
T Consensus 324 ~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 324 ASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CCSSSEEEEEESCCCC
T ss_pred EecCCcEEEEEccCCC
Confidence 6777888888887543
No 175
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.21 E-value=0.0027 Score=56.35 Aligned_cols=197 Identities=7% Similarity=-0.066 Sum_probs=127.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-CCEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-QPKV 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~ 80 (232)
..+++|++..+.|..+.. ++ .|...+++.......+......+..+++.+.+..|+.+. ..+.|...+++.. ....
T Consensus 58 v~~~~~s~~~~~l~~~~~-dg-~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 58 VRAGKFIARKNWIIVGSD-DF-RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp EEEEEEEGGGTEEEEEET-TS-EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEE
T ss_pred EEEEEEeCCCCEEEEEeC-CC-eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEE
Confidence 357889987777776654 45 799999886554444444456788999998777776444 5578999998876 3334
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC--CCCEEEEEECCCCcEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF--RTDELCWVDADSKSLE 158 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~--~~~~Ly~~d~~~~~i~ 158 (232)
.+.........++++|.++.++++... .+.|...++...................+++.+ ++..| ++-...+.|.
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~i~ 211 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM-ITASDDLTIK 211 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE-EEECTTSEEE
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE-EEEeCCCEEE
Confidence 444455667899999844545544433 456888888655444333332136678899988 54444 4546678888
Q ss_pred EEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 159 CMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 159 ~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
..++.......... .......+++. ++.++++-...+.|...+...
T Consensus 212 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 88887655433332 34445677774 444555555567788777764
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.20 E-value=9.4e-05 Score=59.71 Aligned_cols=202 Identities=9% Similarity=0.031 Sum_probs=114.9
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC-CccE--EE----------------EeecCCeEEEEe---
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR-SPEG--LT----------------FDWVNRVLYWTD--- 62 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~-~p~g--l~----------------~d~~~~~ly~~d--- 62 (232)
+.|.+..+.|+++... . .|+.+++++.....+...... .+.| |+ +.+.++.+++..
T Consensus 86 ~~~spdg~~l~~~~~~-~-~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 86 GFISTDERAFFYVKNE-L-NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp CEECTTSSEEEEEETT-T-EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ceECCCCCEEEEEEcC-C-cEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 4577777788776643 3 588899887665444432111 1111 11 111122222222
Q ss_pred -CCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeC-CCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751 63 -SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHP-YYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLPNS 137 (232)
Q Consensus 63 -~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~-~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p~~ 137 (232)
.....|+++++++.....+.. .......++++| .++.|+++..... ..+|+.+++++.....+........+..
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTH 242 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEE
T ss_pred CCCcceEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccc
Confidence 234578888988766555554 334567788888 4566766653211 1579999998876554433210223567
Q ss_pred EEEeCCCCEEEEEEC--CCCc--EEEEecCCCceEEEecCCCceEEEEEE--CCEEEEE-e---------------CCCC
Q psy5751 138 LAVDFRTDELCWVDA--DSKS--LECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWT-D---------------WKTN 195 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~--~~~~--i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~t-d---------------~~~~ 195 (232)
+++++++.+|+++.. .... |+.++++++..+.+...... .+++. ++.++++ . ....
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~--~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC--SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE--EEEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC--CCCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 899999887877733 2334 99999987766555432111 14442 3444443 2 1346
Q ss_pred cEEEEeCCCCCcceEE
Q psy5751 196 RIESANKEGERAPSIA 211 (232)
Q Consensus 196 ~i~~~~~~g~~~~~i~ 211 (232)
.|+.++..+...+.+.
T Consensus 321 ~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 321 FLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEEETTTTBCCEEE
T ss_pred cEEEEecccCceEEcc
Confidence 7888988766555444
No 177
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.19 E-value=0.0019 Score=57.17 Aligned_cols=203 Identities=12% Similarity=0.094 Sum_probs=123.5
Q ss_pred EEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-------------Ce
Q psy5751 4 GITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-------------DT 67 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-------------~~ 67 (232)
++.|.+..+.|.++....+ ..|+.+++++........... ...+++..+. +.||++.... ..
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCE
Confidence 6788888888766543222 269999999776433322211 1246777776 7788876432 35
Q ss_pred EEEEeCCCCCC--EEEEeCCCC--CceEEEEeCCCCeEEEEEcCC--CCCcEEEEeCCCC--C-cEEEEEcCCCCCcceE
Q psy5751 68 ISMANLNDDQP--KVIVSKDLV--NPRGIVVHPYYRKLFWSDWNR--SGPKIEWSNLDGT--D-REIFLKAADLKLPNSL 138 (232)
Q Consensus 68 I~~~~~~g~~~--~~~~~~~~~--~p~~iavd~~~~~ly~~d~~~--~~~~I~~~~~~g~--~-~~~~~~~~~~~~p~~l 138 (232)
|++.++.+... ..+...... ...+++++|.++.|+++.... ....|+..++++. . .+.+... .......
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~~~ 322 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD--LKAQWDF 322 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS--SSSCEEE
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC--CCceEEE
Confidence 88888866542 344442221 246888998777788776542 2568999998776 4 4444433 2222222
Q ss_pred EEeCCCCEEEEEECC---CCcEEEEecCCC--ceEEEec-CCCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751 139 AVDFRTDELCWVDAD---SKSLECMTIRNR--VRRKVYS-NCTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSI 210 (232)
Q Consensus 139 ~~d~~~~~Ly~~d~~---~~~i~~~~~~g~--~~~~~~~-~~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i 210 (232)
+++++++||+.... ..+|+.+++++. ..+.+.. ......++++.++.|+++.... .+|+.++.+|+..+.+
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence 45677888887542 467999999874 3344433 2223456777788888875443 4677777766644444
Q ss_pred E
Q psy5751 211 A 211 (232)
Q Consensus 211 ~ 211 (232)
.
T Consensus 402 ~ 402 (741)
T 1yr2_A 402 S 402 (741)
T ss_dssp B
T ss_pred c
Confidence 3
No 178
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.14 E-value=0.00032 Score=55.24 Aligned_cols=178 Identities=12% Similarity=0.119 Sum_probs=106.3
Q ss_pred EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC
Q psy5751 6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD 85 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 85 (232)
..+. ++.||++.. ++ .|+.++.+|....... ........+++|. .+.||++. +.|++++.+|...- .....
T Consensus 143 ~~~~-~g~l~vgt~-~~-~l~~~d~~g~~~~~~~-~~~~~~~~~~~d~-~g~l~v~t---~~l~~~d~~g~~~~-~~~~~ 213 (330)
T 3hxj_A 143 IVSE-DGTIYVGSN-DN-YLYAINPDGTEKWRFK-TNDAITSAASIGK-DGTIYFGS---DKVYAINPDGTEKW-NFYAG 213 (330)
T ss_dssp EECT-TSCEEEECT-TS-EEEEECTTSCEEEEEE-CSSCCCSCCEECT-TCCEEEES---SSEEEECTTSCEEE-EECCS
T ss_pred EEcC-CCEEEEEcC-CC-EEEEECCCCCEeEEEe-cCCCceeeeEEcC-CCEEEEEe---CEEEEECCCCcEEE-EEccC
Confidence 3443 556766543 34 6888888854433332 2234566677876 56788877 68999995554322 22223
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
.....++++++ +|.||++... +.+.+++.+|......... ...+..+.++.. +.||++.. .+.+.+++.+|.
T Consensus 214 ~~~~~~~~~~~-~g~l~v~t~~---~gl~~~~~~g~~~~~~~~~--~~~~~~~~~~~~-g~l~v~t~-~ggl~~~d~~g~ 285 (330)
T 3hxj_A 214 YWTVTRPAISE-DGTIYVTSLD---GHLYAINPDGTEKWRFKTG--KRIESSPVIGNT-DTIYFGSY-DGHLYAINPDGT 285 (330)
T ss_dssp SCCCSCCEECT-TSCEEEEETT---TEEEEECTTSCEEEEEECS--SCCCSCCEECTT-SCEEEECT-TCEEEEECTTSC
T ss_pred CcceeceEECC-CCeEEEEcCC---CeEEEECCCCCEeEEeeCC--CCccccceEcCC-CeEEEecC-CCCEEEECCCCc
Confidence 34577888996 6799998753 4588887666544333222 334566777754 78988753 567999988665
Q ss_pred ceEEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEEe
Q psy5751 166 VRRKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 166 ~~~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~~ 201 (232)
.............+++. .++.||+.... +.+....
T Consensus 286 ~~~~~~~~~~~~~~~~~d~~g~l~~gt~~-G~~~~~~ 321 (330)
T 3hxj_A 286 EKWNFETGSWIIATPVIDENGTIYFGTRN-GKFYALF 321 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEEEECTT-SCEEEEE
T ss_pred EEEEEEcCCccccceEEcCCCEEEEEcCC-CeEEEEe
Confidence 44333222233445666 47788886543 4444333
No 179
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.13 E-value=0.00021 Score=59.07 Aligned_cols=196 Identities=13% Similarity=0.044 Sum_probs=119.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
..+++|++.+..+..+-..++ .|...+++......++. ..-..+.+|++.+.++.++++-...+.|...|+.+....
T Consensus 122 V~~l~~~P~~~~~lasGs~dg-~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGG-DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTS-CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCC-EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 357999986666555555555 79988887655433332 234578899998755556667777789999999887665
Q ss_pred EEEeCC--CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 80 VIVSKD--LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 80 ~~~~~~--~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
.+.... ......+++++....|..... .+.|...++++.....+... -....++++++.+..++.+-...+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~~~~~~~~~h--~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDN---VGNVILLNMDGKELWNLRMH--KKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECS---SSBEEEEESSSCBCCCSBCC--SSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeC---CCcEeeeccCcceeEEEecc--cceEEeeeecCCCceEEEEecCccee
Confidence 555422 223467889985554444432 46788888887643322111 34567899999877777766666777
Q ss_pred EEEecCCCce-EEEecC---CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 158 ECMTIRNRVR-RKVYSN---CTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 158 ~~~~~~g~~~-~~~~~~---~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
...++..... ..+... .....++++. ++...++-...+.|...+..
T Consensus 276 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 276 KIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp CEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred eEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 7777764322 122211 1223455553 33344444445666666654
No 180
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.12 E-value=0.0022 Score=51.81 Aligned_cols=192 Identities=6% Similarity=-0.046 Sum_probs=122.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCC---------------ccEEEEeecCCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRS---------------PEGLTFDWVNRVLYWTDSQMD 66 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~---------------p~gl~~d~~~~~ly~~d~~~~ 66 (232)
..+++|++..+.|+.+.. ++ .|..+++........+...... +..+++.+ .+. +++-...+
T Consensus 152 v~~~~~~~~~~~l~~~~~-d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~g 227 (425)
T 1r5m_A 152 IVSVKWNKDGTHIISMDV-EN-VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDK-FVIPGPKG 227 (425)
T ss_dssp EEEEEECTTSSEEEEEET-TC-CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE-TTE-EEEECGGG
T ss_pred EEEEEECCCCCEEEEEec-CC-eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCE-EEEEcCCC
Confidence 357889887777776654 34 6888888755433333222222 67778876 344 44556668
Q ss_pred eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751 67 TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
.|...++........+.........++++|....|+.+.. .+.|...++........+... -.....+++++++
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~-- 301 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD---DGTLRIWHGGNGNSQNCFYGH-SQSIVSASWVGDD-- 301 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET---TSCEEEECSSSBSCSEEECCC-SSCEEEEEEETTT--
T ss_pred eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC---CCEEEEEECCCCccceEecCC-CccEEEEEECCCC--
Confidence 8999998876655555445566789999986666655553 356888887755433333322 4567899999975
Q ss_pred EEEEECCCCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 147 LCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
++++-...+.|...+++......... .......+++. ++.++++-...+.|...+..
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 55555667889999987655433333 34456677875 44445554556778888776
No 181
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.002 Score=51.05 Aligned_cols=198 Identities=9% Similarity=0.004 Sum_probs=124.1
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++..+.|+.+. .++ .|...++........+......+.++++.+.++.|+ +-...+.|...++........
T Consensus 35 v~~~~~s~~~~~l~~~~-~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCS-KDS-SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCV-TGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp EEEEEECTTSCEEEEEE-SSS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTTEEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEe-CCC-EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCcEEEE
Confidence 35789998666666555 344 688888876554444544456788999988666665 444568899999987766555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcC--CCCCcEEEEeCCCCC------------cEEEEEcCCCCCcceEEEeCCCCEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWN--RSGPKIEWSNLDGTD------------REIFLKAADLKLPNSLAVDFRTDEL 147 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~--~~~~~I~~~~~~g~~------------~~~~~~~~~~~~p~~l~~d~~~~~L 147 (232)
+. ....+..++++|.+..|+.+... ...+.|...++.... ...+...........+++++++..|
T Consensus 112 ~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 112 WK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp EE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEE
T ss_pred ee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEE
Confidence 55 45578899999966666655432 112456666654332 1111111112267889999986666
Q ss_pred EEEECCCCcEEEEecCC-Cce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 148 CWVDADSKSLECMTIRN-RVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 148 y~~d~~~~~i~~~~~~g-~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
+.+ ...+.|...+++. ... ..+........++++. ++.++++-...+.|...+...
T Consensus 191 ~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 191 IAG-HKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp EEE-ETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEE-cCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 655 4567899988886 332 2223344456678874 444444545567788888764
No 182
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.11 E-value=0.0022 Score=51.59 Aligned_cols=197 Identities=11% Similarity=0.014 Sum_probs=119.7
Q ss_pred eEEEEEe----CCCCE-EEEEEcCCCCcEEEEEcCC-------Ccee-----EEE------eCCCCCccEEEEeecCCeE
Q psy5751 2 LIGITVD----CVEGQ-VYYSSVADKSSIKRAHLDG-------KNVE-----DVI------TTNIRSPEGLTFDWVNRVL 58 (232)
Q Consensus 2 ~~~i~~d----~~~~~-ly~~d~~~~~~i~~~~~~g-------~~~~-----~~~------~~~~~~p~gl~~d~~~~~l 58 (232)
..+++|. +..+. |+.+.. ++ .|...++.. .... .+. ......+..+++.+.+ +
T Consensus 124 v~~~~~~~~~~~~~~~~l~~~~~-dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~ 199 (397)
T 1sq9_A 124 FWALKWGASNDRLLSHRLVATDV-KG-TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--L 199 (397)
T ss_dssp EEEEEEECCC----CEEEEEEET-TS-CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--E
T ss_pred EEEEEEeeccCCCCceEEEEEeC-CC-cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--e
Confidence 3578888 76666 555543 44 677777664 2222 232 2234578899999855 5
Q ss_pred EEEeCCCCeEEEEeCCCCCCEEEEeC---C---CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--
Q psy5751 59 YWTDSQMDTISMANLNDDQPKVIVSK---D---LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-- 130 (232)
Q Consensus 59 y~~d~~~~~I~~~~~~g~~~~~~~~~---~---~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-- 130 (232)
+++-...+.|...++........+.. . ......++++|....|+.+......+.|...++........+...
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 56667778999999986554444443 3 567789999986666655543211156888888755443333320
Q ss_pred ----------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-------C---------------CCceE
Q psy5751 131 ----------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-------N---------------CTYPF 178 (232)
Q Consensus 131 ----------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-------~---------------~~~p~ 178 (232)
.-.....+++++++..|+.+ ...+.|...++.......... . .....
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~ 358 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCSA-GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF 358 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEE-ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred cccccccccccCCcEEEEEECCCCCEEEEE-eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCcee
Confidence 14566899999986666554 467788888887654433322 2 34456
Q ss_pred EEEEECC-----------EEEEEeCCCCcEEEEeCC
Q psy5751 179 GLSITDE-----------KYYWTDWKTNRIESANKE 203 (232)
Q Consensus 179 gla~~~~-----------~ly~td~~~~~i~~~~~~ 203 (232)
++++..+ .++++-...+.|...+..
T Consensus 359 ~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 359 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 8888633 456665556767666554
No 183
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.10 E-value=0.0043 Score=54.54 Aligned_cols=203 Identities=17% Similarity=0.165 Sum_probs=123.3
Q ss_pred EEEEeCCCCEEEEE-EcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC------------CCeE
Q psy5751 4 GITVDCVEGQVYYS-SVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ------------MDTI 68 (232)
Q Consensus 4 ~i~~d~~~~~ly~~-d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~------------~~~I 68 (232)
++++.+..+.|.++ +.... ..|+.+++++........... ...+++.. .++.||++... ...|
T Consensus 133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 67888877777555 43332 368999998766433322211 12344554 47778877544 2468
Q ss_pred EEEeCCCCCC--EEEEeCCC---CCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCC--CcEEEEEcCCCCCcceEEE
Q psy5751 69 SMANLNDDQP--KVIVSKDL---VNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGT--DREIFLKAADLKLPNSLAV 140 (232)
Q Consensus 69 ~~~~~~g~~~--~~~~~~~~---~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~--~~~~~~~~~~~~~p~~l~~ 140 (232)
++.++..... ..+..... ..-.+++++|.++.|+++.... ....|+..++++. ....+... ...-.. .+
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~--~~~~~~-~~ 287 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD--LDADVS-LV 287 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS--SSSCEE-EE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC--CCceEE-EE
Confidence 8888876543 34444222 1235788999888887775432 2358999998765 33444332 111112 25
Q ss_pred eCCCCEEEEEECC---CCcEEEEecCCCce---EEEec-CCCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceEE
Q psy5751 141 DFRTDELCWVDAD---SKSLECMTIRNRVR---RKVYS-NCTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSIA 211 (232)
Q Consensus 141 d~~~~~Ly~~d~~---~~~i~~~~~~g~~~---~~~~~-~~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i~ 211 (232)
++++++||+.-.. ..+|+.+++++... +.+.. ..... +++.++++|+++.... .+|..++.+|...+.+.
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence 6667888887543 46899999987654 44433 22223 7777888888875544 36888888876655554
Q ss_pred e
Q psy5751 212 L 212 (232)
Q Consensus 212 ~ 212 (232)
+
T Consensus 367 ~ 367 (693)
T 3iuj_A 367 L 367 (693)
T ss_dssp C
T ss_pred c
Confidence 4
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.08 E-value=0.0017 Score=57.03 Aligned_cols=202 Identities=10% Similarity=0.101 Sum_probs=123.8
Q ss_pred EEEEEeCCCCEEEEEEc-CCC--CcEEEEEcCCCceeEEEeCCCCCc--cEEEEeecCCeEEEEeCCC------------
Q psy5751 3 IGITVDCVEGQVYYSSV-ADK--SSIKRAHLDGKNVEDVITTNIRSP--EGLTFDWVNRVLYWTDSQM------------ 65 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~-~~~--~~i~~~~~~g~~~~~~~~~~~~~p--~gl~~d~~~~~ly~~d~~~------------ 65 (232)
.+++|.+..+.|.++.. ... ..|+.+++++..... ...+... .+++..+.++.||++....
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 36788988887765543 221 379999999765420 1112222 6788888788888886532
Q ss_pred CeEEEEeCCCCCC--EEEEeCCC--CCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE
Q psy5751 66 DTISMANLNDDQP--KVIVSKDL--VNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNSLAV 140 (232)
Q Consensus 66 ~~I~~~~~~g~~~--~~~~~~~~--~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~ 140 (232)
..|++.++.+... ..+..... ....+++++|.++.|+++.... ....|+..+..+...+.+.... ........
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--~~~~~~~~ 279 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV--GAKYEVHA 279 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS--SCCEEEEE
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC--CceEEEEe
Confidence 3499999987653 34444221 2345888999888888776543 3457888876555555555432 22233333
Q ss_pred eCCCCEEEEEEC---CCCcEEEEecCCCce---EEEec-C-CCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751 141 DFRTDELCWVDA---DSKSLECMTIRNRVR---RKVYS-N-CTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSI 210 (232)
Q Consensus 141 d~~~~~Ly~~d~---~~~~i~~~~~~g~~~---~~~~~-~-~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i 210 (232)
++++ +|+... ...+|+.+++++... +.+.. . .....++++.++.|+++.... .+|+.++.+|+..+.+
T Consensus 280 -~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 280 -WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp -ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred -cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 4545 777644 357899999986652 34433 2 233467777888888875433 4677777666544433
No 185
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.08 E-value=0.0021 Score=50.23 Aligned_cols=196 Identities=11% Similarity=-0.021 Sum_probs=121.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++.+..|.-+. .++ .|...++........+...-.....+++.+.++.|+ +-...+.|...++........
T Consensus 16 V~~~~fsp~~~~l~s~~-~dg-~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTL-YSG-RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWII-VGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp EEEEEECSSSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEE-EEETTSEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEEEc-CCC-cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEE-EECCCCEEEEEECCCCcEEEE
Confidence 35899999766666555 445 788889886554334443345677888888666665 555568899999887665555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
+.........++++|.+..|.-+.. .+.|...++...................+++++.++.++.+-...+.|...+
T Consensus 93 ~~~h~~~v~~~~~~~~~~~l~sgs~---D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEET---TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred EeCCCCcEEEEEEcCCCCEEEEECC---CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 5556667889999996555554443 3557777776543322222221445689999986566556666678888888
Q ss_pred cCCCce-EEEecC-CCceEEEEEE---CCEEEEEeCCCCcEEEEeCC
Q psy5751 162 IRNRVR-RKVYSN-CTYPFGLSIT---DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 162 ~~g~~~-~~~~~~-~~~p~gla~~---~~~ly~td~~~~~i~~~~~~ 203 (232)
+..... ..+... ......+++. ++.+..+-...+.|...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (304)
T ss_dssp TTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred CCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence 865433 222222 2223344442 33445555555667666665
No 186
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.0028 Score=51.18 Aligned_cols=192 Identities=7% Similarity=-0.085 Sum_probs=121.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++..+.|+.+.. ++ .|...+.++..... +......+.++++.+.++.|+.+. ..+.|...++........
T Consensus 111 v~~~~~s~~~~~l~~~~~-dg-~i~i~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVE-NG-ELRLWNKTGALLNV-LNFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGTVMQH 186 (425)
T ss_dssp EEEEEECTTSSEEEEEET-TS-CEEEEETTSCEEEE-ECCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTEEEEE
T ss_pred eEEEEEcCCCCEEEEEeC-CC-eEEEEeCCCCeeee-ccCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEE
Confidence 357889986666666554 34 68888866655433 333446788999988777676554 457899999876554433
Q ss_pred EeCCCCC---------------ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751 82 VSKDLVN---------------PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 82 ~~~~~~~---------------p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
+...... ...++..+ ++.++.... .+.|...++........+... ......+++++.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPGP---KGAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKL 261 (425)
T ss_dssp ECCC---------------CCCBSCCEEEE-TTEEEEECG---GGCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcC-CCEEEEEcC---CCeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCE
Confidence 3322222 66778876 566555543 356888888765443333322 445688999998666
Q ss_pred EEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 147 LCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
|+.+ ...+.|...+++.... ..+.........+++. ++ ++++-...+.|...+...
T Consensus 262 l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 262 LLSA-SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp EEEE-ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT
T ss_pred EEEE-cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC
Confidence 6555 4567888888876543 3333344455678876 45 566666678888888763
No 187
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.05 E-value=0.0024 Score=49.88 Aligned_cols=194 Identities=9% Similarity=-0.018 Sum_probs=121.9
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++..+.|..+. .++ .|...++........+......+..+++.+.++.|+ +-...+.|...++........
T Consensus 26 v~~~~~s~~~~~l~s~~-~dg-~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSS-ADK-LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV-SASDDKTLKIWDVSSGKCLKT 102 (312)
T ss_dssp EEEEEECTTSSEEEEEE-TTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEEee-CCC-eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEE-EECCCCEEEEEECCCCcEEEE
Confidence 35788998666665544 444 688888876555455554456788899998666555 555568899999887665555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
+.........++++|....|+.... .+.|...++........+... ......+++++++..|+.+ ...+.|...+
T Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd 177 (312)
T 4ery_A 103 LKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDGSLIVSS-SYDGLCRIWD 177 (312)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEE-ETTSCEEEEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCEEEEEecCC-CCcEEEEEEcCCCCEEEEE-eCCCcEEEEE
Confidence 5555566788999986666655553 356888888765443333321 3456789999975555544 5577888888
Q ss_pred cCCCce-EEEecC-CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 162 IRNRVR-RKVYSN-CTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 162 ~~g~~~-~~~~~~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+..... ..+... ......+++. ++..+++-...+.|...+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 178 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp TTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred CCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 875543 333222 2233456664 33344444445666666654
No 188
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.04 E-value=0.0018 Score=57.69 Aligned_cols=192 Identities=9% Similarity=0.013 Sum_probs=117.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.++..|. ++.||++-.. + .|++++.+....+..... ....+..+..|. .+.||++.. +.|++++.++.....
T Consensus 410 ~~i~~d~-~g~lWigt~~-~-Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 410 LCSLKDS-EGNLWFGTYL-G-NISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKKVIH 483 (781)
T ss_dssp EEEEECT-TSCEEEEETT-E-EEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSSCCE
T ss_pred EEEEECC-CCCEEEEecc-C-CEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCeEEe
Confidence 3566665 5667665433 3 588887765443332211 224667788886 567887765 579999887655444
Q ss_pred EEeCC-----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCC--CCcceEEEeCCCCEEEEEECC
Q psy5751 81 IVSKD-----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADL--KLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 81 ~~~~~-----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~--~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
..... ...+.+++.|+ +|.||++..+. -+.+.+.++...+.+.....+ ....+|..|.. +.||++..
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~---Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWi~T~- 557 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGG---GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSK-GQMWLATG- 557 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECT-TCCEEEEESSS---CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTT-SCEEEEET-
T ss_pred cccCcccccccceeEEEEEcC-CCCEEEEEcCC---CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCC-CCEEEEEC-
Confidence 43322 24578899997 78898887532 288888776544433221112 23457777875 78888765
Q ss_pred CCcEEEEecCCCceEEEec--CCC--ceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 154 SKSLECMTIRNRVRRKVYS--NCT--YPFGLSIT-DEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~~~--~~~--~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
.+-+.+++..+...+.+.. .++ ...+++.+ +|.||++- .+.|.++++.+...+
T Consensus 558 ~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~ 615 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYITSKKCFY 615 (781)
T ss_dssp TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEETTTTEEE
T ss_pred CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEECCCCceE
Confidence 4433888877665555432 232 24577776 68888875 345889988755444
No 189
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.04 E-value=0.0015 Score=52.52 Aligned_cols=215 Identities=9% Similarity=0.026 Sum_probs=126.5
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce---eEE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV---EDV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~---~~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
.+++|.+ ++.++.+.. ++ .|...++..... ... .......+.++++.+.++.|. +-...+.|...++.....
T Consensus 98 ~~~~~s~-d~~~l~~s~-dg-~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-sgs~dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 98 TDVAWVS-EKGILVASD-SG-AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAV-SGGKDFSVKVWDLSQKAV 173 (357)
T ss_dssp EEEEEET-TTEEEEEET-TS-CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTTEE
T ss_pred EEEEEcC-CCCEEEEEC-CC-EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCcE
Confidence 5788888 456665543 44 677777654321 111 112235678899998666555 555567899999887665
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-cCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-AADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
...+.........+++.+.++.++.+... .+.|...++.......... ...-..+..+++++.++.++.+-...+.|
T Consensus 174 ~~~~~~h~~~v~~v~~s~~~~~~~~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i 251 (357)
T 4g56_B 174 LKSYNAHSSEVNCVAACPGKDTIFLSCGE--DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNV 251 (357)
T ss_dssp EEEECCCSSCEEEEEECTTCSSCEEEEET--TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCE
T ss_pred EEEEcCCCCCEEEEEEccCCCceeeeecc--CCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccce
Confidence 55555556677889998866556655433 4567777776443222221 11133567899999877777665667788
Q ss_pred EEEecCCCceE-EEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEE
Q psy5751 158 ECMTIRNRVRR-KVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAV 226 (232)
Q Consensus 158 ~~~~~~g~~~~-~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~ 226 (232)
...++...+.. .+.........+++. ++.+..+-...+.|...+...... +.. ..+.....+|++-
T Consensus 252 ~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~--~~~-~~H~~~V~~vafs 320 (357)
T 4g56_B 252 SLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV--FRD-LSHRDFVTGVAWS 320 (357)
T ss_dssp EEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE--EEE-CCCSSCEEEEEEC
T ss_pred eEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE--eEE-CCCCCCEEEEEEe
Confidence 88888765443 333333445677773 345555555567788887764332 222 2334455666653
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.04 E-value=0.0028 Score=50.17 Aligned_cols=185 Identities=12% Similarity=0.062 Sum_probs=108.5
Q ss_pred EEEEEeCCCCEEEEEEcCC--C-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC---------------
Q psy5751 3 IGITVDCVEGQVYYSSVAD--K-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--------------- 64 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~--~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--------------- 64 (232)
..+.|.+.++.|+++.... . ..|+.+++++.....+.... . +.++++.+.++.|+++...
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 4678999888887776432 2 25999999876654554432 2 7788888778888887522
Q ss_pred -----------CCeEEEEeCCCCCC-EEEEeCCCCCceEEEEeCCCCeEEEEEcCCC------CCcEEEEeCCCCCcEEE
Q psy5751 65 -----------MDTISMANLNDDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS------GPKIEWSNLDGTDREIF 126 (232)
Q Consensus 65 -----------~~~I~~~~~~g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~------~~~I~~~~~~g~~~~~~ 126 (232)
...|+++++++... +.+.. . ....++.+| +|.+|.+..... ..+|+.++ .+ ..+.+
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~sp-dg~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l 213 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHR-DKIVVNVPHREIIPQYFKFWDIYIWE-DG-KEEKM 213 (347)
T ss_dssp C---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEET-TEEEEEEECCCSSCCSSCCEEEEEEE-TT-EEEEE
T ss_pred eecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCC-CeEEEEEecccccccccccccEEEeC-CC-ceEEe
Confidence 35799999987665 44444 2 677889998 455554443211 34688887 33 33333
Q ss_pred EEcCCCCCcceEEEeCCCCEEEEEECC-------CCcEEEEecCCCceEEEecCCCce-EE-EEEECCEEEEEeCC--CC
Q psy5751 127 LKAADLKLPNSLAVDFRTDELCWVDAD-------SKSLECMTIRNRVRRKVYSNCTYP-FG-LSITDEKYYWTDWK--TN 195 (232)
Q Consensus 127 ~~~~~~~~p~~l~~d~~~~~Ly~~d~~-------~~~i~~~~~~g~~~~~~~~~~~~p-~g-la~~~~~ly~td~~--~~ 195 (232)
... . ....+++++.+|+++... ...|+.++ . +..+.+....... .. +++. +.+|++-.. ..
T Consensus 214 ~~~---~--~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~-~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~ 285 (347)
T 2gop_A 214 FEK---V--SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-G-KEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSV 285 (347)
T ss_dssp EEE---E--SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-S-SCEEESSTTCCSEEEEEEEET-TEEEEEEEETTEE
T ss_pred ccC---c--ceeeECCCCCEEEEEEccccCCccccceEEEEC-C-CceEeccccCCcccCCccEEc-CcEEEEEecCCcE
Confidence 221 1 112337777788777543 35788888 3 3444444333232 33 4554 336665332 23
Q ss_pred cEEEEeCCCC
Q psy5751 196 RIESANKEGE 205 (232)
Q Consensus 196 ~i~~~~~~g~ 205 (232)
+|+ ++ +|.
T Consensus 286 ~l~-~~-~g~ 293 (347)
T 2gop_A 286 NLY-IW-DGE 293 (347)
T ss_dssp EEE-EE-SSS
T ss_pred EEE-Ec-CCc
Confidence 556 66 443
No 191
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.04 E-value=0.0026 Score=49.71 Aligned_cols=219 Identities=8% Similarity=-0.020 Sum_probs=131.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~ 81 (232)
.++.|.+..+.|+.+. .++ .|...+++.......+......+..+++.+.++.| .+-...+.|...++.... ....
T Consensus 59 ~~~~~~~~~~~l~s~s-~d~-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~ 135 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGS-DDF-RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALEQT 135 (304)
T ss_dssp EEEEEEGGGTEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTEEEEE
T ss_pred EEEEEeCCCCEEEEEC-CCC-EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcchhhh
Confidence 3667777666665554 445 78888887655434444445678899999866555 466667889999987653 3334
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC-CCEEEEEECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR-TDELCWVDADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~-~~~Ly~~d~~~~~i~~~ 160 (232)
+.........++++|.++.++.+-.. .+.|...++........+........+.+.+.+. ++.+..+-...+.|...
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~--D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW 213 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEET--TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeC--CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 44455567899999865555555433 4568888876544333332221234456677653 34444555667888888
Q ss_pred ecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCC
Q psy5751 161 TIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 161 ~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
+++......... .......+++. .+.+..+-...+.|...+... ...+.+. .+......+++.+++
T Consensus 214 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~---~~~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---VGLERSWCIATHPTG 282 (304)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC---CSSSSEEEEEECTTC
T ss_pred eCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc---CCCccEEEEEECCCC
Confidence 888654433333 33444566664 445556666667788888764 3333332 334455666665543
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.99 E-value=0.0071 Score=53.19 Aligned_cols=196 Identities=8% Similarity=0.025 Sum_probs=119.9
Q ss_pred CCCEEEEEEcCC-C--CcEEEEEcCCCceeEEEeCC-C-----CCccEEEEeecCCeEEEEeCCCC----eEEEEeCCCC
Q psy5751 10 VEGQVYYSSVAD-K--SSIKRAHLDGKNVEDVITTN-I-----RSPEGLTFDWVNRVLYWTDSQMD----TISMANLNDD 76 (232)
Q Consensus 10 ~~~~ly~~d~~~-~--~~i~~~~~~g~~~~~~~~~~-~-----~~p~gl~~d~~~~~ly~~d~~~~----~I~~~~~~g~ 76 (232)
..+++|+.-... + +.|++.+..+...+.++... + ....++++.+.++.|.++....+ .|++.++++.
T Consensus 82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg 161 (710)
T 2xdw_A 82 KGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA 161 (710)
T ss_dssp ETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT
T ss_pred ECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC
Confidence 456776664322 2 36888887765544444321 1 13467888888888877654332 7999999887
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-------------CCcEEEEeCCCCCc--EEEEEcC-CCCCcceEEE
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-------------GPKIEWSNLDGTDR--EIFLKAA-DLKLPNSLAV 140 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-------------~~~I~~~~~~g~~~--~~~~~~~-~~~~p~~l~~ 140 (232)
.......... ...+++..|.++.||++..... ..+|++.++.+... ..+.... .-....++++
T Consensus 162 ~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 162 KELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp EEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 6443222111 2457899987888988865432 34699999876543 2333322 0123458999
Q ss_pred eCCCCEEEEEEC-C---CCcEEEEecCC------C--ceEEEecCCC-ceEEEEEECCEEEEEeCC---CCcEEEEeCCC
Q psy5751 141 DFRTDELCWVDA-D---SKSLECMTIRN------R--VRRKVYSNCT-YPFGLSITDEKYYWTDWK---TNRIESANKEG 204 (232)
Q Consensus 141 d~~~~~Ly~~d~-~---~~~i~~~~~~g------~--~~~~~~~~~~-~p~gla~~~~~ly~td~~---~~~i~~~~~~g 204 (232)
++++++|+++.. . ...|+.+++++ + ..+.+..... ....+.-+++.||++... +.+|..++..+
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999888888753 2 46899999875 3 3444433222 222234467888887543 34799998875
Q ss_pred CC
Q psy5751 205 ER 206 (232)
Q Consensus 205 ~~ 206 (232)
..
T Consensus 321 ~~ 322 (710)
T 2xdw_A 321 PE 322 (710)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 193
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.99 E-value=0.002 Score=59.26 Aligned_cols=142 Identities=11% Similarity=0.029 Sum_probs=97.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEE-EEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIK-RAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~-~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
+++|. ..+.|+++.. .. .|+ .+++++.....+. .....+..+++.+.++.|+++... +.|++.++.+.....+.
T Consensus 342 ~~~~s-dg~~l~~~s~-~~-~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~-~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTR-EG-DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR-FEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EECSS-SEEEEEEEET-TE-EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEE
T ss_pred eeeEc-CCCeEEEEEC-CC-ceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC-CeEEEEECCCCceEEec
Confidence 34555 4456666554 44 788 8888876654443 334567889999988888877654 68999999887766666
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCC-------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNR-------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~-------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
........+++++|..+.|.++.... ....|+..++++.....+ ... ...+..+++++++.+||++..
T Consensus 417 ~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l-~~~-~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 417 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTE-NSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC-SCS-SSBEEEEEECTTSCEEEEEES
T ss_pred cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe-eCC-CcccCCceEcCCCCEEEEEec
Confidence 54444557899999777787775421 235788999887643222 221 445678899999899998865
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.98 E-value=0.0015 Score=51.68 Aligned_cols=163 Identities=12% Similarity=0.048 Sum_probs=101.8
Q ss_pred cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC----CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCC
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ----MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYR 99 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~ 99 (232)
.|+.+++++.....+ .....+++.+.++.|+++... ...|+++++++.....+..... ..+++..|.++
T Consensus 44 ~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~ 116 (347)
T 2gop_A 44 TIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSR 116 (347)
T ss_dssp EEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSS
T ss_pred eEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCC
Confidence 688899987665444 456778898888888877543 3459999998876555554222 77889998777
Q ss_pred eEEEEEcC------------------------CCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECC-
Q psy5751 100 KLFWSDWN------------------------RSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDAD- 153 (232)
Q Consensus 100 ~ly~~d~~------------------------~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~- 153 (232)
.|+++... ....+|++.++++... ..+.. . ....+++++++ .+|.+...
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~ 191 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHRE 191 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCC
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEEEeccc
Confidence 88887532 0135688899887665 44433 2 56788999985 55555332
Q ss_pred -------CCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCC-------CCcEEEEe
Q psy5751 154 -------SKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWK-------TNRIESAN 201 (232)
Q Consensus 154 -------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~-------~~~i~~~~ 201 (232)
...|+.++ ++..+.+... .....+.-++.+|+++... ...|+.++
T Consensus 192 ~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 192 IIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp SSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ccccccccccEEEeC--CCceEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 33688888 3444444333 2222332245556555422 24677777
No 195
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.98 E-value=0.00012 Score=62.19 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=79.7
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCC-------------------CCCcEEEEeCCCCC-------cEEEEEc--------
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNR-------------------SGPKIEWSNLDGTD-------REIFLKA-------- 129 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~-------------------~~~~I~~~~~~g~~-------~~~~~~~-------- 129 (232)
+.+.+|.+++++|.++.+|++-.+. ..++|+++..++.. -.+++..
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4677999999999999999985431 13789998875432 1333321
Q ss_pred ------------CCCCCcceEEEeCCCCEEEE-EECC-----------CCcEEEEecCCCceEEEec--CCCceEEEEEE
Q psy5751 130 ------------ADLKLPNSLAVDFRTDELCW-VDAD-----------SKSLECMTIRNRVRRKVYS--NCTYPFGLSIT 183 (232)
Q Consensus 130 ------------~~~~~p~~l~~d~~~~~Ly~-~d~~-----------~~~i~~~~~~g~~~~~~~~--~~~~p~gla~~ 183 (232)
..+..|++|+||+. +.||+ +|.. .+.+++++++.+..+.++. ....|.|+++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 12688999999997 89999 7753 3479999997667766765 45679999994
Q ss_pred --CCEEEEEeC
Q psy5751 184 --DEKYYWTDW 192 (232)
Q Consensus 184 --~~~ly~td~ 192 (232)
+..||++-.
T Consensus 540 PD~ktLfV~vQ 550 (592)
T 4a9v_A 540 PDQKTLFVGIQ 550 (592)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 678999854
No 196
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.98 E-value=0.0034 Score=48.97 Aligned_cols=195 Identities=9% Similarity=-0.023 Sum_probs=119.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++..+.|+.+. .++ .|...+++.......+.........+++.+.++.|+ +-...+.|...++........+
T Consensus 69 ~~~~~~~~~~~l~s~~-~d~-~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 69 SDVAWSSDSNLLVSAS-DDK-TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp EEEEECTTSSEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCEEEEEC-CCC-EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCEEEEEe
Confidence 4788988666665554 445 788889886554444444446678889988666555 5555678999998876654445
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~ 162 (232)
.........+++++....|+.+.. .+.|...++........+..........+++++.+..|..+ ...+.|...++
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~ 221 (312)
T 4ery_A 146 PAHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDY 221 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE-ETTTEEEEEET
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEEC
Confidence 444456688999985555555543 35688888875543333322213345678999986666554 55678888888
Q ss_pred CCCceEEEecC-CC--ceEEEEE--ECCEEEEEeCCCCcEEEEeCCC
Q psy5751 163 RNRVRRKVYSN-CT--YPFGLSI--TDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 163 ~g~~~~~~~~~-~~--~p~gla~--~~~~ly~td~~~~~i~~~~~~g 204 (232)
........... .. ......+ .++.++++-...+.|...+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 222 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 76544333221 11 1111122 3455566666667777777653
No 197
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.97 E-value=0.0045 Score=50.23 Aligned_cols=192 Identities=9% Similarity=0.028 Sum_probs=116.7
Q ss_pred EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC
Q psy5751 6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD 85 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 85 (232)
.+.+..+.|. +-..++ .|...++........+......+..+++.+.++.|+ +-...+.|...++........+...
T Consensus 104 ~~~~~~~~l~-~~~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 104 TAKLQMRRFI-LGTTEG-DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp EECSSSCEEE-EEETTS-CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCCCEEEECC
T ss_pred EEecCCCEEE-EEECCC-CEEEEeCCCcceeeecccccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCcCceEEcCC
Confidence 3444444444 444445 788888886654444334456788999998666555 5555688999998766554444556
Q ss_pred CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--CC---------------------CCcceEEEeC
Q psy5751 86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--DL---------------------KLPNSLAVDF 142 (232)
Q Consensus 86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--~~---------------------~~p~~l~~d~ 142 (232)
......++++|....|+.+.. .+.|...++........+... .. .....+++++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASL---DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEET---TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred CCcEEEEEEcCCCCEEEEEcC---CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 667889999996666665553 345777777654333222210 01 2233455566
Q ss_pred CCCEEEEEECCCCcEEEEecCCCceEE-Eec-CCCceEEEEEE-CCE-EEEEeCCCCcEEEEeCCC
Q psy5751 143 RTDELCWVDADSKSLECMTIRNRVRRK-VYS-NCTYPFGLSIT-DEK-YYWTDWKTNRIESANKEG 204 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~g~~~~~-~~~-~~~~p~gla~~-~~~-ly~td~~~~~i~~~~~~g 204 (232)
++..| ++-...+.|...++....... +.. .......+++. ++. ++++-...+.|...+...
T Consensus 258 ~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 258 YGKYV-IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp TTEEE-EEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCEE-EEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 64444 454567788888887655432 322 23445678875 333 555555668888888874
No 198
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.96 E-value=0.0015 Score=51.67 Aligned_cols=158 Identities=9% Similarity=0.025 Sum_probs=99.4
Q ss_pred EEEEEeCC---CCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeC----CCCCccEEEEeecC---CeEEEEeCCCCeEEEE
Q psy5751 3 IGITVDCV---EGQVYYSSVADKSSIKRAHLDGKN-VEDVITT----NIRSPEGLTFDWVN---RVLYWTDSQMDTISMA 71 (232)
Q Consensus 3 ~~i~~d~~---~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~----~~~~p~gl~~d~~~---~~ly~~d~~~~~I~~~ 71 (232)
.+++|++. .+.++++-...+ .|...++.... ...+... ....+..+++.+.. +.++++-...+.|...
T Consensus 22 ~~i~~~p~~~~~~~~~~~~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~ 100 (366)
T 3k26_A 22 FGVQFNWHSKEGDPLVFATVGSN-RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 100 (366)
T ss_dssp EEEEECTTCCTTSCEEEEEEETT-EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEE
T ss_pred EEEEEecccCCCCceEEEECCCC-EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEE
Confidence 47888873 344444444455 68888887433 2222211 22467888888753 3455566667899999
Q ss_pred eCCCCCCEEEEeCCCCCceEEEEeC-CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE--cCCCCCcceEEEeCCCCEEE
Q psy5751 72 NLNDDQPKVIVSKDLVNPRGIVVHP-YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK--AADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 72 ~~~g~~~~~~~~~~~~~p~~iavd~-~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~--~~~~~~p~~l~~d~~~~~Ly 148 (232)
++........+.........++++| ....|+.... .+.|...++........+. ...-.....+++++++..|+
T Consensus 101 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 101 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK---DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp CTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred EchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 9887665555555666788999998 4444544443 4568888887654443331 12245678999999866665
Q ss_pred EEECCCCcEEEEecCCC
Q psy5751 149 WVDADSKSLECMTIRNR 165 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~g~ 165 (232)
.+ ...+.|...+++..
T Consensus 178 ~~-~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 178 SC-GMDHSLKLWRINSK 193 (366)
T ss_dssp EE-ETTSCEEEEESCSH
T ss_pred Ee-cCCCCEEEEECCCC
Confidence 55 45677888887743
No 199
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.93 E-value=0.0047 Score=49.08 Aligned_cols=197 Identities=10% Similarity=0.056 Sum_probs=118.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeec--CCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
..+++|++..+.|..+.. ++ .|...++++...+ ..+......+..+++.+. ++.|+ +-...+.|...++....
T Consensus 14 v~~~~~s~~~~~l~~~~~-dg-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSS-DK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILA-SCSYDGKVLIWKEENGR 90 (379)
T ss_dssp EEEEEECSSSSEEEEEET-TS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSCEEEEEEETTE
T ss_pred EEEEEEcCCCCEEEEEEC-CC-cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEE-EeccCCEEEEEEcCCCc
Confidence 357899987676665543 44 6888887643322 223333456778888654 45554 55556789998887764
Q ss_pred --CEEEEeCCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCC--------
Q psy5751 78 --PKVIVSKDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFR-------- 143 (232)
Q Consensus 78 --~~~~~~~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~-------- 143 (232)
..............++++|. ...|+.+.. .+.|...++.... ........ ......+++++.
T Consensus 91 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 91 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTTSCCCEEEEECC-TTCEEEEEECCCC-------
T ss_pred eeEeeeecCCCcceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCCCceeeEEecCC-CCceEEEEEcCccccccccc
Confidence 22333345567789999986 455555553 4568888876652 22233322 456688999984
Q ss_pred ----CCEEEEEECCCCcEEEEecCCCceE-EE-e---cCCCceEEEEEE-C---CEEEEEeCCCCcEEEEeCCCC
Q psy5751 144 ----TDELCWVDADSKSLECMTIRNRVRR-KV-Y---SNCTYPFGLSIT-D---EKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 144 ----~~~Ly~~d~~~~~i~~~~~~g~~~~-~~-~---~~~~~p~gla~~-~---~~ly~td~~~~~i~~~~~~g~ 205 (232)
++.++++-...+.|...+++..... .+ . ........+++. . +.++.+-...+.|...+....
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 2444455455677777777644321 12 1 123445678874 3 566666666777887777643
No 200
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.93 E-value=0.0054 Score=49.76 Aligned_cols=196 Identities=11% Similarity=0.007 Sum_probs=120.9
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++..+.|+.+. .++ .|...++........+......+.++++.+.++.|+ +-...+.|...++........
T Consensus 142 v~~~~~~~~~~~l~s~s-~d~-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSS-QDM-QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL-SASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp EEEEEECTTSSEEEEEE-TTS-EEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEE
T ss_pred cEEEEECCCCCEEEEEe-CCC-eEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCCceeEE
Confidence 35789998666565444 445 799999885544344444456788999998666666 444557899999876544333
Q ss_pred EeC---CC---------------------CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751 82 VSK---DL---------------------VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNS 137 (232)
Q Consensus 82 ~~~---~~---------------------~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~ 137 (232)
+.. .. .....++++|....|+.... .+.|...++........+..........
T Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV---SGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET---TSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC---CCeEEEEECCCCceeEEcccccCCCcee
Confidence 321 11 22233445563344444442 4568888887665444443322346789
Q ss_pred EEEeCCCCEEEEEECCCCcEEEEecCCCc--eEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 138 LAVDFRTDELCWVDADSKSLECMTIRNRV--RRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~--~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
+++++.+..++++-...+.|...+++... ...+.. .......+.+..+.++++-...+.|...+..
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 99999866355555667889999998653 234433 3333445656677777777777777777654
No 201
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.93 E-value=0.0045 Score=48.82 Aligned_cols=197 Identities=8% Similarity=-0.043 Sum_probs=116.9
Q ss_pred eEEEEEeCCCCEEEEEEcC---CCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecC--CeEEEEeCCCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVA---DKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVN--RVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~---~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~--~~ly~~d~~~~~I~~~~~~g 75 (232)
..+++|++.+..+..+... ++ .|...+++......+.. .....+..+++.+.. +.++++-...+.|...++..
T Consensus 21 v~~~~~~p~~~~l~~~~s~~~~d~-~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFARGTG-VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA 99 (357)
T ss_dssp EEEEEECTTSSEEEEEEC--CCCE-EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS
T ss_pred eEEEEEcCCCceEEEecCccCCCc-EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC
Confidence 3578999977777766543 55 88888888655433322 233577888888753 34444555668899999887
Q ss_pred CC-CEEEEeCCCCCceEEE------EeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCC--CCCcceEE----E
Q psy5751 76 DQ-PKVIVSKDLVNPRGIV------VHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAAD--LKLPNSLA----V 140 (232)
Q Consensus 76 ~~-~~~~~~~~~~~p~~ia------vd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~--~~~p~~l~----~ 140 (232)
.. ....+.........++ +++....|+.+.. .+.|...++.... ...+..... ......++ +
T Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 100 PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET---TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCccEEEEEecccceEEEeeccccccCCCccEEEEEeC---CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 65 4444444555566664 3554455555443 3568888877654 222221110 11344555 4
Q ss_pred eCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE----CCEEEEEeCCCCcEEEEeCC
Q psy5751 141 DFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT----DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 141 d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~----~~~ly~td~~~~~i~~~~~~ 203 (232)
++.+..| ++-...+.|...+++................+++. .+..+++-...+.|...+..
T Consensus 177 ~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 177 NQEERVV-CAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp C-CCCEE-EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred CCCCCEE-EEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 4554444 44455778999999877654444444556778874 44555555556778777765
No 202
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.90 E-value=0.0051 Score=48.61 Aligned_cols=196 Identities=8% Similarity=-0.043 Sum_probs=116.5
Q ss_pred EEEEEeCCC---CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVE---GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~---~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.+++|.+.. +.++++-..++ .|...++........+......+..+++.+..+.++++-...+.|...++......
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRG-IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTC-EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEeccCCCCCCCEEEEecCCC-EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE
Confidence 467777642 45555555566 79999988655444444445678899998834444556556688999999866554
Q ss_pred EEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE---------------------------EEc
Q psy5751 80 VIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF---------------------------LKA 129 (232)
Q Consensus 80 ~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~---------------------------~~~ 129 (232)
..+ ......+..++++|....|+.+.. .+.|...++........ ...
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLGEKIMSCGM---DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTSSEEEEEET---TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred EEecccccccCceeEEEECCCCCEEEEecC---CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 444 235567789999986666655553 34688777764321100 000
Q ss_pred CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce------------EEEe---cCCCceEEEEEE-C--CEEEEEe
Q psy5751 130 ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR------------RKVY---SNCTYPFGLSIT-D--EKYYWTD 191 (232)
Q Consensus 130 ~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~------------~~~~---~~~~~p~gla~~-~--~~ly~td 191 (232)
........++++ ++ ++++-...+.|...++..... ..+. ........+++. + +.+.++-
T Consensus 229 ~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~ 305 (366)
T 3k26_A 229 IHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG 305 (366)
T ss_dssp SCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE
T ss_pred CCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE
Confidence 013445678887 34 445556677888887765432 1121 122223344542 3 5555555
Q ss_pred CCCCcEEEEeCCCC
Q psy5751 192 WKTNRIESANKEGE 205 (232)
Q Consensus 192 ~~~~~i~~~~~~g~ 205 (232)
...+.|...+....
T Consensus 306 ~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 306 NQVGKLYVWDLEVE 319 (366)
T ss_dssp CTTSCEEEEECCSS
T ss_pred ecCCcEEEEECCCC
Confidence 66788888888743
No 203
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.89 E-value=0.0059 Score=49.03 Aligned_cols=182 Identities=9% Similarity=-0.036 Sum_probs=116.1
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
....+..+++.+.+..++++-...+.|...++.+........ .......++++.|.++.++++-.. .+.|...++.
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--d~~i~iwd~~ 149 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI--RGATTLRDFS 149 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET--TTEEEEEETT
T ss_pred CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC--CCEEEEEECC
Confidence 346788899998663455566667899999998877666654 355567899999844444444332 4568888888
Q ss_pred CCCcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCE-EEEEeCCCCc
Q psy5751 120 GTDREIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEK-YYWTDWKTNR 196 (232)
Q Consensus 120 g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~-ly~td~~~~~ 196 (232)
+.....+.... .......+++++++..|+.+ ...+.|...++++.....+........++++. ++. ++++-...+.
T Consensus 150 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 150 GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATG-DSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp SCEEEEEECCCCSSCCEEEEEEETTTTEEEEE-ETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred CCceEEEeccCCCCCCeEEEEECCCCCEEEEE-CCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 75444443321 11446899999986666555 45678999999876656555555667788885 333 6666666778
Q ss_pred EEEEeCCC-CC-cceEEeccCCcceeEEEEEEc
Q psy5751 197 IESANKEG-ER-APSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 197 i~~~~~~g-~~-~~~i~~~~~~~~~p~gi~~~~ 227 (232)
|...+... .. ...+.. .........+++-+
T Consensus 229 i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 229 VKLWDLRNIKDKNSYIAE-MPHEKPVNAAYFNP 260 (383)
T ss_dssp EEEEEGGGCCSTTCEEEE-EECSSCEEEEEECT
T ss_pred EEEEeCCCCCcccceEEE-ecCCCceEEEEEcC
Confidence 88888763 21 122222 12344556666544
No 204
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.84 E-value=0.002 Score=56.51 Aligned_cols=203 Identities=10% Similarity=0.028 Sum_probs=118.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCC-------CcEEEEEcCCCceeEEEeCC--CCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751 2 LIGITVDCVEGQVYYSSVADK-------SSIKRAHLDGKNVEDVITTN--IRSPEGLTFDWVNRVLYWTDSQMDTISMAN 72 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~-------~~i~~~~~~g~~~~~~~~~~--~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~ 72 (232)
+.+++|++..+.|.++..... ..|+..++++.....+.... ...+..+++.+.++.|.++.. +.|++.+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~ 140 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCA 140 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEES
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEE
Confidence 347889998888877753211 27888999876543332211 112677889888888888765 5899999
Q ss_pred CCCCCCEEEEeCCCC------------------CceEEEEeCCCCeEEEEEcCCC-------------------------
Q psy5751 73 LNDDQPKVIVSKDLV------------------NPRGIVVHPYYRKLFWSDWNRS------------------------- 109 (232)
Q Consensus 73 ~~g~~~~~~~~~~~~------------------~p~~iavd~~~~~ly~~d~~~~------------------------- 109 (232)
+++.....+...... ...+++.+|.++.|.++.....
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 988776665542221 3368999997777877653211
Q ss_pred ------CCcEEEEeCCCCCcEEEEEcC-C----CCCcceEEEeCCCCEEEEE-ECC--CCcEEEEecCCCceEEEecC--
Q psy5751 110 ------GPKIEWSNLDGTDREIFLKAA-D----LKLPNSLAVDFRTDELCWV-DAD--SKSLECMTIRNRVRRKVYSN-- 173 (232)
Q Consensus 110 ------~~~I~~~~~~g~~~~~~~~~~-~----~~~p~~l~~d~~~~~Ly~~-d~~--~~~i~~~~~~g~~~~~~~~~-- 173 (232)
...|+..++++......+... . ......+++++++..|+.. +.. ...|+.++++++....+...
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 300 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES 300 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc
Confidence 115666666655431111110 0 1123468999986666443 332 24688889887765544321
Q ss_pred CCc----eEEEEEE--CCEEEEE-eCCCC------cEEEEe-CCCCC
Q psy5751 174 CTY----PFGLSIT--DEKYYWT-DWKTN------RIESAN-KEGER 206 (232)
Q Consensus 174 ~~~----p~gla~~--~~~ly~t-d~~~~------~i~~~~-~~g~~ 206 (232)
... +..+++. +..|+++ ....+ .|+.++ ..++.
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred CCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 111 1355663 4456654 33333 677777 44443
No 205
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.83 E-value=0.0077 Score=48.38 Aligned_cols=191 Identities=6% Similarity=-0.082 Sum_probs=115.4
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc------eeEEEeCCCCCccEEEEeec----C---CeEEEEeCCCCeEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN------VEDVITTNIRSPEGLTFDWV----N---RVLYWTDSQMDTIS 69 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~------~~~~~~~~~~~p~gl~~d~~----~---~~ly~~d~~~~~I~ 69 (232)
.+++|++ +.|+.+ ..++ .|...+++... ....+......+..+++.+. + +.|+ +-...+.|.
T Consensus 20 ~~~~~~~--~~l~s~-~~dg-~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~-s~~~dg~i~ 94 (397)
T 1sq9_A 20 FSVSACN--SFTVSC-SGDG-YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA-TTSFSGDLL 94 (397)
T ss_dssp EEEEECS--SEEEEE-ETTS-EEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE-EEETTSCEE
T ss_pred EEEEecC--CeEEEE-cCCC-EEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE-EEcCCCCEE
Confidence 4788876 544444 4455 78888988655 22333344457788999886 4 4554 444567888
Q ss_pred EEeCCCCCC-----EEEEeCC-----CCCceEEEEe----CCCCe-EEEEEcCCCCCcEEEEeCCC-------CCcE---
Q psy5751 70 MANLNDDQP-----KVIVSKD-----LVNPRGIVVH----PYYRK-LFWSDWNRSGPKIEWSNLDG-------TDRE--- 124 (232)
Q Consensus 70 ~~~~~g~~~-----~~~~~~~-----~~~p~~iavd----~~~~~-ly~~d~~~~~~~I~~~~~~g-------~~~~--- 124 (232)
..++..... ...+... ......+++. |.... |+.+... +.|...++.. ....
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~ 171 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSLTLNWSP 171 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHTTTCCCC
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccceeeccC
Confidence 888877664 3333323 2677899999 86666 5555533 4566666654 2222
Q ss_pred --EEEE-----cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC-------CCceEEEEEE-CCEEEE
Q psy5751 125 --IFLK-----AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-------CTYPFGLSIT-DEKYYW 189 (232)
Q Consensus 125 --~~~~-----~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~-------~~~p~gla~~-~~~ly~ 189 (232)
.+.. .........+++++.+ ++++-...+.|...+++.......... ......+++. ++.+++
T Consensus 172 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~ 249 (397)
T 1sq9_A 172 TLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 249 (397)
T ss_dssp EEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE
T ss_pred cceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEE
Confidence 3322 1124567899999985 555656778899999886544333333 4455677774 344444
Q ss_pred EeCCC---CcEEEEeCC
Q psy5751 190 TDWKT---NRIESANKE 203 (232)
Q Consensus 190 td~~~---~~i~~~~~~ 203 (232)
+-... +.|...+..
T Consensus 250 ~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 250 IAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEEETTEEEEEEEETT
T ss_pred EEecCCCCceEEEEECC
Confidence 44444 678888865
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.81 E-value=0.0087 Score=48.53 Aligned_cols=215 Identities=10% Similarity=0.031 Sum_probs=124.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++.+..|+.+. .++ .|...++........+......+..+++.+.++.|+ +-...+.|...++........+
T Consensus 127 ~~v~~s~dg~~l~s~~-~d~-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 127 RSVCFSPDGKFLATGA-EDR-LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp EEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEc-CCC-eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCeeEEEE
Confidence 4788988666665544 445 799999987655444544456788899988666665 5556688999998776554444
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE------cCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK------AADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~------~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
. .......+++.|.++.++.+... .+.|...++........+. ........++++++++..|+ +-...+.
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~--d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~d~~ 279 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSL--DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGSLDRS 279 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEET--TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE-EEETTSE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcC--CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE-EEeCCCE
Confidence 4 33457788898855655555433 3557777776554322221 11123567899999866665 4455677
Q ss_pred EEEEecCCCce-------------EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeE
Q psy5751 157 LECMTIRNRVR-------------RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMY 221 (232)
Q Consensus 157 i~~~~~~g~~~-------------~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~ 221 (232)
|...+++.... ..+.........+++. ++....+-...+.|...+... .....+. .+.....
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~---~h~~~v~ 356 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVI 356 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC---CCCCCEE
Confidence 77777653211 1111222334566664 444445555567777777653 3322222 2333445
Q ss_pred EEEEEc
Q psy5751 222 GIAAVP 227 (232)
Q Consensus 222 gi~~~~ 227 (232)
.+++.+
T Consensus 357 ~v~~~~ 362 (393)
T 1erj_A 357 SVAVAN 362 (393)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 555543
No 207
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.80 E-value=0.0084 Score=48.10 Aligned_cols=195 Identities=14% Similarity=0.061 Sum_probs=117.9
Q ss_pred eEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-------------CCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751 2 LIGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-------------TNIRSPEGLTFDWVNRVLYWTDSQMDT 67 (232)
Q Consensus 2 ~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-------------~~~~~p~gl~~d~~~~~ly~~d~~~~~ 67 (232)
..+++|++ ..+.|+.+. .++ .|...+++......... .....+..+++.+.++.++++-...+.
T Consensus 46 v~~~~~s~~~~~~l~~~~-~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGG-SDG-VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp EEEEEECTTTCCEEEEEE-TTS-CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred EEEEEEecCCCCEEEEEc-CCC-eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 35788998 555555444 445 68888888643221111 133567888888745555556666789
Q ss_pred EEEEeCCCCCCEEEEeCCCCCceEEEEeCCCC---eEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751 68 ISMANLNDDQPKVIVSKDLVNPRGIVVHPYYR---KLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 68 I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~---~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~ 144 (232)
|...+++......... .......+++.+... .++.... .+.|...++........+... .....++++++.+
T Consensus 124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~ 198 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGH-RQEILAVSWSPRY 198 (408)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCC-CSCEEEEEECSSC
T ss_pred EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCC-CCcEEEEEECCCC
Confidence 9999998766555554 334566777776432 4444443 456888888755443333322 4567899999987
Q ss_pred CEEEEEECCCCcEEEEecCCCce-EEEe----------------cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 145 DELCWVDADSKSLECMTIRNRVR-RKVY----------------SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g~~~-~~~~----------------~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..++++-...+.|...+++.... .... .......++++. ++..+++-...+.|...+..
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 76666666678888888864431 1111 112234567774 44444444445667777765
No 208
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.0092 Score=53.11 Aligned_cols=195 Identities=7% Similarity=-0.007 Sum_probs=115.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-------C--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-------T--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-------~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~ 73 (232)
.++..|. ++.|+++-... .|.+++........... . ....+.+++.|. .+.||+.... +.|.+.+.
T Consensus 316 ~~i~~D~-~g~lWigt~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~-~Gl~~~~~ 390 (781)
T 3v9f_A 316 RYIFQDS-FNNIWIGTWGG--GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDG-GGINVFEN 390 (781)
T ss_dssp EEEEECS-SCCEEEEEBSS--CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBS-SCEEEEET
T ss_pred EEEEEeC-CCCEEEEecCC--eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCC-CcEEEEEC
Confidence 3566676 56666655443 48888777554433321 1 124567888886 4678776533 45788776
Q ss_pred CCCCCEEEEe---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEEEE
Q psy5751 74 NDDQPKVIVS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDELCW 149 (232)
Q Consensus 74 ~g~~~~~~~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~ 149 (232)
+......... .......+++.|+ ++.||+.... +-+.+++......+.+.... .......+..|.. +.||+
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g~lwi 465 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDS-EGNLWFGTYL---GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN-KKIWI 465 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECT-TSCEEEEETT---EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT-SEEEE
T ss_pred CCCeEEEccCCCCCCCcceEEEEECC-CCCEEEEecc---CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC-CCEEE
Confidence 5432211111 1223567888886 7888887643 23777776544333221110 1234567788875 78888
Q ss_pred EECCCCcEEEEecCCCceEEEec-C-----CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751 150 VDADSKSLECMTIRNRVRRKVYS-N-----CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSI 210 (232)
Q Consensus 150 ~d~~~~~i~~~~~~g~~~~~~~~-~-----~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i 210 (232)
+.. +.+.+++.++...+.+.. . ...+.+++.+ ++.||++-...+ +.++++.+...+.+
T Consensus 466 gt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 466 GTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKF 530 (781)
T ss_dssp EET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEE
T ss_pred EEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEc
Confidence 865 569999988765544432 1 2345677776 678888876444 88898876654433
No 209
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.80 E-value=0.017 Score=51.47 Aligned_cols=210 Identities=10% Similarity=0.038 Sum_probs=122.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--------CCCCccEEEEeecCCe-EEEEeCCCCeEEEEeC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--------NIRSPEGLTFDWVNRV-LYWTDSQMDTISMANL 73 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--------~~~~p~gl~~d~~~~~-ly~~d~~~~~I~~~~~ 73 (232)
.++..|. ++.||++-... .|.+++.+.......... ....+.+++.|. .+. ||+... .+.|.+++.
T Consensus 360 ~~i~~d~-~g~lWiGt~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~-~~Gl~~~d~ 434 (795)
T 4a2l_A 360 SCIVEDK-DKNLWIGTNDG--GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTH-AGGLSILHR 434 (795)
T ss_dssp EEEEECT-TSCEEEEESSS--CEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEET-TTEEEEEET
T ss_pred EEEEECC-CCCEEEEECCC--CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeC-cCceeEEeC
Confidence 4667776 66677665443 488888775544333211 124567888886 456 766544 356888988
Q ss_pred CCCCCEEEEeC----CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc----C-CCCCcceEEEeCCC
Q psy5751 74 NDDQPKVIVSK----DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA----A-DLKLPNSLAVDFRT 144 (232)
Q Consensus 74 ~g~~~~~~~~~----~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~----~-~~~~p~~l~~d~~~ 144 (232)
++.....+... .......++.|+ +|.||+.... -+.+.+......+..... . .......+..|..
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~- 508 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTLS----ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH- 508 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEESS----CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT-
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEecC----ceeEEeCCCCeEEEccccccccccCCceEEEEEECCC-
Confidence 76554333210 123567888886 7888887753 288888765443332211 1 0134567888875
Q ss_pred CEEEEEECCCCcEEEEecCCCceEEEe---c--CC--CceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEecc-C
Q psy5751 145 DELCWVDADSKSLECMTIRNRVRRKVY---S--NC--TYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDM-M 215 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g~~~~~~~---~--~~--~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~-~ 215 (232)
++||++.. +.+.+++.++... .+. . .+ ....+++.+ ++.||++-.. .+.++++.+...+.+.... .
T Consensus 509 g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl 583 (795)
T 4a2l_A 509 KRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGL 583 (795)
T ss_dssp CCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTTEEEEECGGGTC
T ss_pred CCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCCcEEEeCCCCCC
Confidence 78988875 5688888876544 332 1 11 224566665 6788887654 5899998765444332211 1
Q ss_pred CcceeEEEEEEcC
Q psy5751 216 GTTYMYGIAAVPS 228 (232)
Q Consensus 216 ~~~~p~gi~~~~~ 228 (232)
......+|+...+
T Consensus 584 ~~~~i~~i~~d~~ 596 (795)
T 4a2l_A 584 PNNVVYGILEDSF 596 (795)
T ss_dssp SCSCEEEEEECTT
T ss_pred chhheEEEEECCC
Confidence 1234556655543
No 210
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.008 Score=47.47 Aligned_cols=184 Identities=13% Similarity=0.004 Sum_probs=114.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC----CCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ----MDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~----~~~I~~~~~~g~~ 77 (232)
..+++|++..+.|+.+. .++ .|...++........+. ....+..+++.+.++.++.+... .+.|...++....
T Consensus 77 v~~~~~~~~~~~l~s~~-~dg-~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 77 IWSIDVDCFTKYCVTGS-ADY-SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp EEEEEECTTSSEEEEEE-TTT-EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred EEEEEEcCCCCEEEEEe-CCC-eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 35788988666665554 445 79999988655434444 34678899999877766655433 2678877765543
Q ss_pred C------------EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE-EEEEcCCCCCcceEEEeCC
Q psy5751 78 P------------KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE-IFLKAADLKLPNSLAVDFR 143 (232)
Q Consensus 78 ~------------~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~-~~~~~~~~~~p~~l~~d~~ 143 (232)
. ..+.. ........+++++....|+.+.. .+.|...++...... ..+... .....+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~ 229 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK---DGKISKYDVSNNYEYVDSIDLH-EKSISDMQFSPD 229 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET---TSEEEEEETTTTTEEEEEEECC-SSCEEEEEECTT
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC---CCEEEEEECCCCcEeEEEEecC-CCceeEEEECCC
Confidence 1 11111 12226788999986666666553 467888888863322 223322 456789999998
Q ss_pred CCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCC
Q psy5751 144 TDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWK 193 (232)
Q Consensus 144 ~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~ 193 (232)
+..|+.+ ...+.|...+++................+++. +..++.+...
T Consensus 230 ~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 230 LTYFITS-SRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp SSEEEEE-ETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECC
T ss_pred CCEEEEe-cCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecC
Confidence 6666555 55778999998876554444444445566663 4455555443
No 211
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.79 E-value=0.0087 Score=47.87 Aligned_cols=189 Identities=6% Similarity=-0.024 Sum_probs=113.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
.++.|.+.+..|+-+. .++ .|...++........+......+..+++.+. .+.++++-...+.|...++........
T Consensus 158 ~~~~~~~~~~~l~t~s-~D~-~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 158 SACSFTNSDMQILTAS-GDG-TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp EEEEECSSSSEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCEEEEEe-CCC-cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 3677777666665444 445 7888888765543444433456667777653 234555666678999999887665555
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+........+++++|....|..+.. .+.|...++............ .......+++++++..|+.+ ...+.|...
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~---D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g-~~d~~i~vw 311 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSD---DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG-YNDYTINVW 311 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE-ECCCcEEEE
Confidence 5555567789999985555544443 356888887654333333221 12345789999985555544 556788888
Q ss_pred ecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcE
Q psy5751 161 TIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRI 197 (232)
Q Consensus 161 ~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i 197 (232)
++..+.. ..+.........+++. ++..+.+-...+.|
T Consensus 312 d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v 350 (354)
T 2pbi_B 312 DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL 350 (354)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCE
Confidence 8865443 3333334445677774 34434443333444
No 212
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.78 E-value=0.0082 Score=47.21 Aligned_cols=191 Identities=11% Similarity=-0.015 Sum_probs=113.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|.+....|+-+. .++ .|...++........+......+..+++.+.+..| ++-...+.|...++.+.....+.
T Consensus 69 ~~~~~s~dg~~l~s~s-~D~-~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 69 QDCTLTADGAYALSAS-WDK-TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLATLL 145 (319)
T ss_dssp EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEEEC
T ss_pred EEEEECCCCCEEEEEe-CCC-EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEe
Confidence 3577887555555444 445 78888987655434444445678889998855544 46666688999999875443333
Q ss_pred eCCCCCceEEEEeCCC-----CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 83 SKDLVNPRGIVVHPYY-----RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~-----~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
........+++.|.. +.++++... .+.|...++........+... -...+.+++++++..| .+-...+.|
T Consensus 146 -~h~~~v~~~~~~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l-~s~~~dg~i 220 (319)
T 3frx_A 146 -GHNDWVSQVRVVPNEKADDDSVTIISAGN--DKMVKAWNLNQFQIEADFIGH-NSNINTLTASPDGTLI-ASAGKDGEI 220 (319)
T ss_dssp -CCSSCEEEEEECCC------CCEEEEEET--TSCEEEEETTTTEEEEEECCC-CSCEEEEEECTTSSEE-EEEETTCEE
T ss_pred -ccCCcEEEEEEccCCCCCCCccEEEEEeC--CCEEEEEECCcchhheeecCC-CCcEEEEEEcCCCCEE-EEEeCCCeE
Confidence 344456677777632 223343322 456888887755433333322 4567899999985555 444567888
Q ss_pred EEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
...++...+.............+++. +..|..+.. ..+..++.+
T Consensus 221 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~ 266 (319)
T 3frx_A 221 MLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA--TGIKVFSLD 266 (319)
T ss_dssp EEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET--TEEEEEEET
T ss_pred EEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEeC
Confidence 88888866543333333445677774 334444332 334444433
No 213
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.78 E-value=0.00055 Score=54.94 Aligned_cols=194 Identities=9% Similarity=-0.023 Sum_probs=105.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC---C
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ---P 78 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~ 78 (232)
+++|++..+.|..+. .++ .|...++++.. ....+......+..+++.+.++.|+ +-...+.|...++.... .
T Consensus 16 ~~~~s~~g~~l~~~~-~d~-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTT-ATN-QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIV-TCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CCEECSSSSEEECCC-SSS-CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEE-EEETTSSEEEC------CCCC
T ss_pred EEEECCCCCEEEEec-CCC-EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEE-EEeCCCeEEEEEcCCCCceee
Confidence 577888555554432 334 67777776542 2122223345678899988666665 44455788888887655 3
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC----cEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD----REIFLKAADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~----~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
...+.........++++|....|+.... .+.|...+++... ...+ ....-.....+++++++..|..+ ...
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~-~~d 167 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWVSKHL-KRPLRSTILSLDWHPNNVLLAAG-CAD 167 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCCCEEE-CSSCCSCEEEEEECTTSSEEEEE-ESS
T ss_pred eeEecccCCceEEEEECCCCCEEEEEec---CCeEEEEEECCcccceeeeEe-ecccCCCeEEEEEcCCCCEEEEE-eCC
Confidence 3333345556788999986666666554 3457777776654 2322 22124567899999986666555 445
Q ss_pred CcEEEEecCCCc---------------eEEEe---cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCC
Q psy5751 155 KSLECMTIRNRV---------------RRKVY---SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 155 ~~i~~~~~~g~~---------------~~~~~---~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~ 205 (232)
+.|...+++... ..... ........+++. ++.++++-...+.|...+....
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 667666664211 11122 122234577774 4444444445567777776633
No 214
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.74 E-value=0.019 Score=50.30 Aligned_cols=196 Identities=8% Similarity=0.058 Sum_probs=118.9
Q ss_pred CCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCC-C-----CCccEEEEeecCCeEEEEeCCC----CeEEEEeCCCC
Q psy5751 10 VEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTN-I-----RSPEGLTFDWVNRVLYWTDSQM----DTISMANLNDD 76 (232)
Q Consensus 10 ~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~-~-----~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~g~ 76 (232)
..+++|++..... +.|++.+..+...+.++..+ + ....++++.+.++.|.++-... ..|++.++++.
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG 157 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence 4567776654321 36899998776655554321 1 1356788888888777664332 47999999887
Q ss_pred CCE-EEEeCCCCCceEEEEeCCCCeEEEEEcCCC----------CCcEEEEeCCCCCc--EEEEEcCC-CCCcceEEEeC
Q psy5751 77 QPK-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS----------GPKIEWSNLDGTDR--EIFLKAAD-LKLPNSLAVDF 142 (232)
Q Consensus 77 ~~~-~~~~~~~~~p~~iavd~~~~~ly~~d~~~~----------~~~I~~~~~~g~~~--~~~~~~~~-~~~p~~l~~d~ 142 (232)
... ....... ...+++..|.+..||++..... ..+|++.++.+... ..+..... -..-.++++++
T Consensus 158 ~~~~~~~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp 236 (695)
T 2bkl_A 158 EWSKVDVIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR 236 (695)
T ss_dssp CBCSSCCBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT
T ss_pred CCcCCcccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC
Confidence 642 1011111 1257889987788888876432 35699999887653 33333321 12445889999
Q ss_pred CCCEEEEEECC---CCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEE-eC--CCCcEEEEeCCCCC
Q psy5751 143 RTDELCWVDAD---SKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWT-DW--KTNRIESANKEGER 206 (232)
Q Consensus 143 ~~~~Ly~~d~~---~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~t-d~--~~~~i~~~~~~g~~ 206 (232)
++.+|+++... ...|+.++..++..+.+..............+.+|++ +. .+.+|.+++..+..
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 98888776432 3478888776555555544333333333343336665 33 35789999987544
No 215
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.74 E-value=0.01 Score=47.06 Aligned_cols=214 Identities=10% Similarity=0.035 Sum_probs=126.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
.+++|++..+.|..+. .++ .|...++.... ....+.........+++.+ .+.++ +-...+.|...++.....
T Consensus 101 ~~~~~s~~~~~l~s~~-~d~-~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~-s~s~d~~i~~wd~~~~~~ 176 (340)
T 1got_B 101 MTCAYAPSGNYVACGG-LDN-ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIV-TSSGDTTCALWDIETGQQ 176 (340)
T ss_dssp EEEEECTTSSEEEEEE-TTC-EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TTEEE-EEETTSCEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEe-CCC-eEEEEECccCCCcceeEEEecCCCccEEEEEECC-CCcEE-EEECCCcEEEEECCCCcE
Confidence 4677888666555444 344 67777776432 1122233334566677765 34444 555567899999876655
Q ss_pred EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
...+.........+++.|. +.++.+... .+.|...++........+... ....+++++++++..| .+-...+.|.
T Consensus 177 ~~~~~~h~~~v~~~~~~~~-~~~l~sg~~--d~~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l-~s~s~d~~v~ 251 (340)
T 1got_B 177 TTTFTGHTGDVMSLSLAPD-TRLFVSGAC--DASAKLWDVREGMCRQTFTGH-ESDINAICFFPNGNAF-ATGSDDATCR 251 (340)
T ss_dssp EEEECCCSSCEEEEEECTT-SSEEEEEET--TSCEEEEETTTCSEEEEECCC-SSCEEEEEECTTSSEE-EEEETTSCEE
T ss_pred EEEEcCCCCceEEEEECCC-CCEEEEEeC--CCcEEEEECCCCeeEEEEcCC-cCCEEEEEEcCCCCEE-EEEcCCCcEE
Confidence 5555445567789999984 545554432 456888887765444333322 4567899999985555 4545677888
Q ss_pred EEecCCCceEEEecC---CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751 159 CMTIRNRVRRKVYSN---CTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~---~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
..+++.......... ......+++. .+.+..+-...+.|...+... .....+. .+......|++-++
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~---~h~~~v~~~~~s~d 323 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA---GHDNRVSCLGVTDD 323 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTT
T ss_pred EEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee---cCCCcEEEEEEcCC
Confidence 888876543322221 1234567774 555666666667788887653 3222221 33344555665443
No 216
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.73 E-value=0.0024 Score=52.65 Aligned_cols=157 Identities=9% Similarity=0.039 Sum_probs=101.9
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
..+..|++.+....+..+-...+.|...+++......+.. .+.....+++++|.++.++++-.. .+.|...++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~--D~~v~iwd~~~~ 197 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM--EGTTRLQDFKGN 197 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS--SSCEEEEETTSC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC--CCEEEEeeccCC
Confidence 4578899988666666676677899999988766544443 345567899999866655555433 456888888876
Q ss_pred CcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEE
Q psy5751 122 DREIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIE 198 (232)
Q Consensus 122 ~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~ 198 (232)
....+.... .......+++++++..| ++-...+.|...++++.....+........++++. +..++.+-...+.|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMV-VTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEE-EEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEE-EEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 655554432 12234678999985555 45466788999998876543333233445677774 345666655556666
Q ss_pred EEeCC
Q psy5751 199 SANKE 203 (232)
Q Consensus 199 ~~~~~ 203 (232)
..+..
T Consensus 277 iwd~~ 281 (435)
T 4e54_B 277 IWDLR 281 (435)
T ss_dssp EEETT
T ss_pred EEecc
Confidence 66654
No 217
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.72 E-value=0.022 Score=50.40 Aligned_cols=194 Identities=12% Similarity=0.135 Sum_probs=116.8
Q ss_pred CCCCEEEEEEcCCC---CcEEEEEcC---CCceeEEEeCC-C-----CCccEEEEeecCCeEEEEeCCC----CeEEEEe
Q psy5751 9 CVEGQVYYSSVADK---SSIKRAHLD---GKNVEDVITTN-I-----RSPEGLTFDWVNRVLYWTDSQM----DTISMAN 72 (232)
Q Consensus 9 ~~~~~ly~~d~~~~---~~i~~~~~~---g~~~~~~~~~~-~-----~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~ 72 (232)
+..+++|++-.... +.|++.+.. +...+.++..+ + ....++++.+.++.|.++.... ..|++.+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 34567766643222 478999886 55544443321 1 1346778888888777664332 3599999
Q ss_pred CCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-----------CCcEEEEeCCCCCc--EEEEEcCCC-CCcceE
Q psy5751 73 LNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-----------GPKIEWSNLDGTDR--EIFLKAADL-KLPNSL 138 (232)
Q Consensus 73 ~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-----------~~~I~~~~~~g~~~--~~~~~~~~~-~~p~~l 138 (232)
+++........... ...+++..|. +.||++..... ..+|++.++.+... ..+.....- ..-.++
T Consensus 196 l~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 196 VADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp TTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 98876433211111 1246788887 88888865432 44688888865542 333333201 134588
Q ss_pred EEeCCCCEEEEEEC----CCCcEEEEecCCC--c-eEEEecCCCceEE-EEEECCEEEEEeC---CCCcEEEEeCCC
Q psy5751 139 AVDFRTDELCWVDA----DSKSLECMTIRNR--V-RRKVYSNCTYPFG-LSITDEKYYWTDW---KTNRIESANKEG 204 (232)
Q Consensus 139 ~~d~~~~~Ly~~d~----~~~~i~~~~~~g~--~-~~~~~~~~~~p~g-la~~~~~ly~td~---~~~~i~~~~~~g 204 (232)
++++++.+|+++-. ....|+.+++++. . .+.+......... +.-+++.||+... .+.+|+.++..+
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 99999888877653 2458999999876 4 4555443222222 2346788877743 245789988875
No 218
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.72 E-value=0.023 Score=50.66 Aligned_cols=189 Identities=12% Similarity=0.093 Sum_probs=115.1
Q ss_pred EEEEEeCCCCE-EEEEEcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 3 IGITVDCVEGQ-VYYSSVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 3 ~~i~~d~~~~~-ly~~d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
.++..|. ++. ||++-.. + .|++++.++...+..... ....+.++..|. .+.||++.. +.+++++.+...
T Consensus 409 ~~i~~d~-~g~~lWigt~~-~-Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 409 KAVYVDE-KKSLVYIGTHA-G-GLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRS 482 (795)
T ss_dssp EEEEEET-TTTEEEEEETT-T-EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTE
T ss_pred EEEEEcC-CCCEEEEEeCc-C-ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCe
Confidence 4667776 455 6665433 3 589988876554333221 124567888887 567887765 468888876543
Q ss_pred CEEEEeC------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE--cC---CCCCcceEEEeCCCCE
Q psy5751 78 PKVIVSK------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK--AA---DLKLPNSLAVDFRTDE 146 (232)
Q Consensus 78 ~~~~~~~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~--~~---~~~~p~~l~~d~~~~~ 146 (232)
...+... .......++.|+ +|.||+.... -+.+.+.++... .+.. .. ......+|..|.. +.
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~-g~ 555 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGEE----GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASN-GI 555 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEESS----CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTT-SC
T ss_pred EEEccccccccccCCceEEEEEECC-CCCEEEEeCC----ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCC-CC
Confidence 3222211 123567888886 7888887752 278877665433 2111 00 0123457777875 78
Q ss_pred EEEEECCCCcEEEEecCCCceEEEec--CCC--ceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751 147 LCWVDADSKSLECMTIRNRVRRKVYS--NCT--YPFGLSIT-DEKYYWTDWKTNRIESANKEGERAP 208 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~g~~~~~~~~--~~~--~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~ 208 (232)
||++... .+.+++.++...+.+.. .++ ...+++.+ +|.||++- .+.|.++++.+...+
T Consensus 556 lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~ 618 (795)
T 4a2l_A 556 IWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETEKFR 618 (795)
T ss_dssp EEEEESS--CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEE
T ss_pred EEEEeCC--CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCCcEE
Confidence 8887653 68899887665554432 232 24567776 67888876 356889988765544
No 219
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.70 E-value=0.012 Score=46.73 Aligned_cols=193 Identities=8% Similarity=-0.057 Sum_probs=119.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--E-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--K- 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~- 79 (232)
.+++|++..+.|+ +-..++ .|...+.........+......+..+++.+.++.|. +-...+.|...++..... .
T Consensus 59 ~~~~~s~d~~~l~-s~s~Dg-~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~v~iw~~~~~~~~~~~ 135 (340)
T 1got_B 59 YAMHWGTDSRLLL-SASQDG-KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA-CGGLDNICSIYNLKTREGNVRV 135 (340)
T ss_dssp EEEEECTTSSEEE-EEETTT-EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEE-EEETTCEEEEEETTTCSBSCEE
T ss_pred EEEEECCCCCEEE-EEeCCC-cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEE-EEeCCCeEEEEECccCCCccee
Confidence 4788888555554 444555 788888876554344444445678889988666555 444567888888865431 1
Q ss_pred -EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 80 -VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 80 -~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
..+.........++..+ .+.|..+.. .+.|...++........+... ......++++++ +.++++-...+.|.
T Consensus 136 ~~~~~~h~~~v~~~~~~~-~~~l~s~s~---d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~-~~~l~sg~~d~~v~ 209 (340)
T 1got_B 136 SRELAGHTGYLSCCRFLD-DNQIVTSSG---DTTCALWDIETGQQTTTFTGH-TGDVMSLSLAPD-TRLFVSGACDASAK 209 (340)
T ss_dssp EEEEECCSSCEEEEEEEE-TTEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred EEEecCCCccEEEEEECC-CCcEEEEEC---CCcEEEEECCCCcEEEEEcCC-CCceEEEEECCC-CCEEEEEeCCCcEE
Confidence 12223444556677765 566655543 355888887755433333322 445688999997 45555656678888
Q ss_pred EEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 159 CMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 159 ~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
..++...... .+........++++. ++.++.+-...+.|...+...
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 8888765543 333334456688885 555566666667788887663
No 220
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.67 E-value=0.02 Score=48.69 Aligned_cols=193 Identities=5% Similarity=-0.084 Sum_probs=116.1
Q ss_pred EEEEEeCCCCEEEEEEcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.+++|++....|+.+..... ..|+..+ .......+......+..+++.+.++.++++-...+.|...+........
T Consensus 120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~ 197 (615)
T 1pgu_A 120 SDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 197 (615)
T ss_dssp EEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE
T ss_pred EEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee
Confidence 47888887777776664432 1454444 2222223333446778899998766456666677899999987655444
Q ss_pred EEeCCCC---CceEEEEeCC-CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc---CCCCCcceEEEeCCCCEEEEEECC
Q psy5751 81 IVSKDLV---NPRGIVVHPY-YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA---ADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 81 ~~~~~~~---~p~~iavd~~-~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~---~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
.+..... ....++++|. ...|+.... .+.|...++........+.. .......+++++ ++..| ++-..
T Consensus 198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~~~ 272 (615)
T 1pgu_A 198 SDRTHHKQGSFVRDVEFSPDSGEFVITVGS---DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKF-ATVGA 272 (615)
T ss_dssp EECSSSCTTCCEEEEEECSTTCCEEEEEET---TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEE-EEEET
T ss_pred eecccCCCCceEEEEEECCCCCCEEEEEeC---CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEE-EEEcC
Confidence 4443444 5789999996 455555543 35688888876554443311 214566789998 54455 45455
Q ss_pred CCcEEEEecCCCceEEEecCC-----CceEEEEE-ECCEEEEEeCCCCcEEEEeCC
Q psy5751 154 SKSLECMTIRNRVRRKVYSNC-----TYPFGLSI-TDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~~~~~-----~~p~gla~-~~~~ly~td~~~~~i~~~~~~ 203 (232)
.+.|...+++........... .....+.+ .++.++... ..+.|...+..
T Consensus 273 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~d~~ 327 (615)
T 1pgu_A 273 DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS-LDGTLNFYELG 327 (615)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-TTSCEEEEETT
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE-CCCCEEEEECC
Confidence 678888888855433222221 23445555 355554444 45677777765
No 221
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.67 E-value=0.019 Score=51.00 Aligned_cols=193 Identities=9% Similarity=0.047 Sum_probs=114.9
Q ss_pred EEEEe-CCCCEEEEEEcCCC---CcEEEEEcCCC-ceeEEEeCCC-CCccEEEEeecCCeEEEEeCCC----CeEEEEeC
Q psy5751 4 GITVD-CVEGQVYYSSVADK---SSIKRAHLDGK-NVEDVITTNI-RSPEGLTFDWVNRVLYWTDSQM----DTISMANL 73 (232)
Q Consensus 4 ~i~~d-~~~~~ly~~d~~~~---~~i~~~~~~g~-~~~~~~~~~~-~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~ 73 (232)
++.+. +..+.|.++....+ ..|+.+++++. .. +...+ ....+++..+.++.||++.... ..|++.++
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 56788 87777766654332 24999999876 41 11111 1134567777777888875431 36999999
Q ss_pred CCCCC--EEEEeCC-CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--c--EEEEEcCCCCCcceEEEe-CCCC
Q psy5751 74 NDDQP--KVIVSKD-LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--R--EIFLKAADLKLPNSLAVD-FRTD 145 (232)
Q Consensus 74 ~g~~~--~~~~~~~-~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~--~~~~~~~~~~~p~~l~~d-~~~~ 145 (232)
++... ..+.... ...-.++.++|.++.|+++........|+.+++++.. . +.+... ...+. ..++ ..++
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~-~s~~~~~g~ 331 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR--EKGVR-YDVQMHGTS 331 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC--CTTCC-EEEEEETTT
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC--CCCce-EEEeeeeCC
Confidence 87642 3444422 2223467789988889988766556789999998752 2 333222 11221 2233 3367
Q ss_pred EEEEEECC----CCcEEEEecCC-Cc-eE-EEecCCC-ceEEEEEECCEEEEEeCCC--CcEEEEeC
Q psy5751 146 ELCWVDAD----SKSLECMTIRN-RV-RR-KVYSNCT-YPFGLSITDEKYYWTDWKT--NRIESANK 202 (232)
Q Consensus 146 ~Ly~~d~~----~~~i~~~~~~g-~~-~~-~~~~~~~-~p~gla~~~~~ly~td~~~--~~i~~~~~ 202 (232)
.||+.... ..+|+++++++ .. +. .+..... ...+++++.+.|+++.... .+|..++.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 78777433 35899999885 33 33 3433322 3356677788888875433 35677774
No 222
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.67 E-value=0.011 Score=46.22 Aligned_cols=191 Identities=10% Similarity=0.017 Sum_probs=115.0
Q ss_pred eEEEEEeCCCC-EEEEEEcCCCCcEEEEEc-CCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC--
Q psy5751 2 LIGITVDCVEG-QVYYSSVADKSSIKRAHL-DGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-- 75 (232)
Q Consensus 2 ~~~i~~d~~~~-~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-- 75 (232)
..+++|++..+ .|+.+. .++ .|..+++ ++... ..+.. ....+..+++.+ ++.|+ +-...+.|...++..
T Consensus 59 v~~~~~~~~~~~~l~~~~-~dg-~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 59 LLCCNFIDNTDLQIYVGT-VQG-EILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLI-AASWDGLIEVIDPRNYG 133 (342)
T ss_dssp EEEEEEEESSSEEEEEEE-TTS-CEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEE-EEETTSEEEEECHHHHT
T ss_pred eEEEEECCCCCcEEEEEc-CCC-eEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccccc
Confidence 35788888666 666655 344 7999998 76654 33333 445778899988 66555 555667899888764
Q ss_pred -------CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC-CCc-EEEEEcCCCCCcceEEEeC-CCC
Q psy5751 76 -------DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG-TDR-EIFLKAADLKLPNSLAVDF-RTD 145 (232)
Q Consensus 76 -------~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g-~~~-~~~~~~~~~~~p~~l~~d~-~~~ 145 (232)
......+. ....+..+++++ ++ ++.+.. .+.|...++.. ... ........-..+..+++++ ++.
T Consensus 134 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~-l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTK-VKNKIFTMDTNS-SR-LIVGMN---NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE 207 (342)
T ss_dssp TBCEEEEESCSSSSS-SCCCEEEEEECS-SE-EEEEES---TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC
T ss_pred cccccccCCeeeEEe-eCCceEEEEecC-Cc-EEEEeC---CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC
Confidence 22111111 344677888886 33 555553 45688888876 322 1222222244678999998 755
Q ss_pred EEEEEECCCCcEEEEecCCC------c-eEEEecCC---------CceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 146 ELCWVDADSKSLECMTIRNR------V-RRKVYSNC---------TYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 146 ~Ly~~d~~~~~i~~~~~~g~------~-~~~~~~~~---------~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
.++.+ ...+.|...+++.. . ...+.... .....+++. ++.+.++-...+.|...+...
T Consensus 208 ~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 208 GYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 55544 45677777666543 2 23332221 155677774 455455555567888888763
No 223
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.66 E-value=0.016 Score=47.02 Aligned_cols=192 Identities=9% Similarity=0.018 Sum_probs=115.4
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------------------CCCccEEEEeecCCeEEEEeCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------------------IRSPEGLTFDWVNRVLYWTDSQ 64 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------------------~~~p~gl~~d~~~~~ly~~d~~ 64 (232)
.+++|++....|..+. ++ .+...+.........+... ...+..+++.+.++.|+ +-..
T Consensus 68 ~~v~fspdg~~la~g~--~~-~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~-s~~~ 143 (393)
T 1erj_A 68 CCVKFSNDGEYLATGC--NK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA-TGAE 143 (393)
T ss_dssp CEEEECTTSSEEEEEC--BS-CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE-EEET
T ss_pred EEEEECCCCCEEEEEc--CC-cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE-EEcC
Confidence 3678888666554432 34 5666666543322222110 01256788888666555 5555
Q ss_pred CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751 65 MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 65 ~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~ 144 (232)
.+.|...++........+.........+++.|.+..|+.+.. .+.|...++........+.. ......+++.+.+
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~ 218 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPGD 218 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEECSTT
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeEEEEEc--CCCcEEEEEECCC
Confidence 688999999876655555556667789999986666655543 45688888876544333332 3467788999855
Q ss_pred CEEEEEECCCCcEEEEecCCCceE-EEec-------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 145 DELCWVDADSKSLECMTIRNRVRR-KVYS-------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~-------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+.++.+-...+.|...+++..... .+.. ......++++. ++.+..+-...+.|...+..
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 666666666788888888765432 2211 12234577774 44445555556667766654
No 224
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.65 E-value=0.015 Score=50.81 Aligned_cols=193 Identities=11% Similarity=-0.005 Sum_probs=113.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++++++..+.|.-+. .++ .|...++........+......+.++++.+.++.|. +-...+.|...+..+.....+.
T Consensus 434 ~~v~~s~~g~~l~sgs-~Dg-~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGS-WDG-ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEEC
T ss_pred EEEEECCCCCEEEEEe-CCC-cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcceeec
Confidence 4678888555555444 445 788899886554344444456788999988666665 5556678888887665433333
Q ss_pred e---CCCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 83 S---KDLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 83 ~---~~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
. .+......++++|... .++++-.. .+.|...++........+... ......+++++++..| .+-...+.|.
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l-~sg~~Dg~i~ 586 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASW--DKTVKVWNLSNCKLRSTLAGH-TGYVSTVAVSPDGSLC-ASGGKDGVVL 586 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEE-EEEETTSBCE
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeC--CCeEEEEECCCCcEEEEEcCC-CCCEEEEEEeCCCCEE-EEEeCCCeEE
Confidence 2 1233457888887442 23333322 356888888766554444332 4567899999985554 4545677888
Q ss_pred EEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 159 CMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 159 ~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..++.................+++. ++.+..+ ...+.|...+..
T Consensus 587 iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~~~i~iwd~~ 631 (694)
T 3dm0_A 587 LWDLAEGKKLYSLEANSVIHALCFSPNRYWLCA-ATEHGIKIWDLE 631 (694)
T ss_dssp EEETTTTEEEECCBCSSCEEEEEECSSSSEEEE-EETTEEEEEETT
T ss_pred EEECCCCceEEEecCCCcEEEEEEcCCCcEEEE-EcCCCEEEEECC
Confidence 8888765432222233334566664 3332222 223445555554
No 225
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.64 E-value=0.023 Score=48.38 Aligned_cols=195 Identities=12% Similarity=-0.058 Sum_probs=122.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC----ceeEEEeCCCCC-ccEEEEee--cCCeEEEEeCCCCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGK----NVEDVITTNIRS-PEGLTFDW--VNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~----~~~~~~~~~~~~-p~gl~~d~--~~~~ly~~d~~~~~I~~~~~~g 75 (232)
.+++|++..+.|.++. ++ .|...+++.. .....+...... +..+++.+ .++.|+.+. ..+.|.+.++..
T Consensus 22 ~~~~~spdg~~l~~~~--~~-~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~dg~v~vw~~~~ 97 (615)
T 1pgu_A 22 THLSYDPTTNAIAYPC--GK-SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-ESGKVIVWGWTF 97 (615)
T ss_dssp CCCEEETTTTEEEEEE--TT-EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-TTSEEEEEEEEE
T ss_pred eEEEECCCCCEEEEec--CC-eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-CCCEEEEEeCCC
Confidence 4688999888888877 44 7888888754 333444444455 78999998 777776554 457888888843
Q ss_pred C--------CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751 76 D--------QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE 146 (232)
Q Consensus 76 ~--------~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~ 146 (232)
. .....+.........++++|.+..|+.+....+ .+.|+..+ .......+.. .......+++++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~ 174 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSG-HSQRINACHLKQSRPM 174 (615)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCS-CSSCEEEEEECSSSSC
T ss_pred CcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeec-CCccEEEEEECCCCCc
Confidence 2 222233335566789999997776766654311 13455544 2222222222 2456789999998664
Q ss_pred EEEEECCCCcEEEEecCCCceEEEec-CCC---ceEEEEEE-C-CEEEEEeCCCCcEEEEeCCC
Q psy5751 147 LCWVDADSKSLECMTIRNRVRRKVYS-NCT---YPFGLSIT-D-EKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 147 Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~---~p~gla~~-~-~~ly~td~~~~~i~~~~~~g 204 (232)
++++-...+.|...+.+......... ... ....+++. + +.++++-...+.|...+...
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS 238 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 55666667888888877654433333 333 45678874 4 55555555567888888653
No 226
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.64 E-value=0.015 Score=46.16 Aligned_cols=194 Identities=7% Similarity=0.001 Sum_probs=117.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
..+++|++..+.|+.+. .++ .|...++......... ......+..+++.+.++.|+.+. ..+.|...+++.....
T Consensus 55 v~~~~~~~~~~~l~~~~-~dg-~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 55 VTGVDWAPDSNRIVTCG-TDR-NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDW 131 (372)
T ss_dssp EEEEEEETTTTEEEEEE-TTS-CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTE
T ss_pred ccEEEEeCCCCEEEEEc-CCC-eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcc
Confidence 35788998666666655 344 6888888765432222 22345778899988666666555 4577888887766532
Q ss_pred ---EEE-eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC------------------CCCcEEEEEcCCCCCcce
Q psy5751 80 ---VIV-SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD------------------GTDREIFLKAADLKLPNS 137 (232)
Q Consensus 80 ---~~~-~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~------------------g~~~~~~~~~~~~~~p~~ 137 (232)
... .........++++|.+..|+.... .+.|...++. .......+. ........
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 207 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC---DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHG 207 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEEEEEET---TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEE
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEEEEEcC---CCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEE
Confidence 222 233556789999985555555543 3457777753 111111111 11345789
Q ss_pred EEEeCCCCEEEEEECCCCcEEEEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 138 LAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 138 l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
+++++++..|+.+ ...+.|...+++..+.. .+.........+++. ++.++.+- ..+.|...+...
T Consensus 208 ~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 208 VCFSANGSRVAWV-SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSSSEEEEE-ETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEECCCCCEEEEE-eCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999986666655 45778888888755443 333333445688875 66655555 556666666544
No 227
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.64 E-value=0.0071 Score=53.50 Aligned_cols=201 Identities=8% Similarity=0.042 Sum_probs=112.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------------------CCCccEEEEeecCCeEEEEe--
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------------------IRSPEGLTFDWVNRVLYWTD-- 62 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------------------~~~p~gl~~d~~~~~ly~~d-- 62 (232)
...+|.+..+.|.++. ++ .|+..++.+.....+...+ +....+++..+.++.|.++.
T Consensus 115 ~~~~~SPdG~~la~~~--~~-~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 115 QWVTWSPVGHKLAYVW--NN-DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (740)
T ss_dssp EEEEECSSTTCEEEEE--TT-EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred eeeEECCCCCEEEEEE--CC-eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEc
Confidence 4667888777776653 24 6888888765543332211 11223577777777776652
Q ss_pred CCC---------------------------------CeEEEEeCCC---C---CCEEEEe-----CCCCCceEEEEeCCC
Q psy5751 63 SQM---------------------------------DTISMANLND---D---QPKVIVS-----KDLVNPRGIVVHPYY 98 (232)
Q Consensus 63 ~~~---------------------------------~~I~~~~~~g---~---~~~~~~~-----~~~~~p~~iavd~~~ 98 (232)
... ..|++.++++ . ....+.. ........++..|.+
T Consensus 192 ~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg 271 (740)
T 4a5s_A 192 DTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE 271 (740)
T ss_dssp CTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT
T ss_pred ccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC
Confidence 110 1466677776 4 2222211 012223466777744
Q ss_pred CeEE-EEEcCCCCCcEEEEeCCCCC-------cEEEEEcCCCCC-----cceEEEeCCCCEEE-EEECC--CCcEEEEec
Q psy5751 99 RKLF-WSDWNRSGPKIEWSNLDGTD-------REIFLKAADLKL-----PNSLAVDFRTDELC-WVDAD--SKSLECMTI 162 (232)
Q Consensus 99 ~~ly-~~d~~~~~~~I~~~~~~g~~-------~~~~~~~~~~~~-----p~~l~~d~~~~~Ly-~~d~~--~~~i~~~~~ 162 (232)
+.++ +....+...+|+..++++.. ...+.....-.+ +...++++++..|+ |.... ..+|+.++.
T Consensus 272 ~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 272 RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 4233 33333334468888877655 222222210111 45788999987776 66433 458999999
Q ss_pred CCCceEEEecCCCceEEE-EEECCEEEEEeCC------CCcEEEEeCCCCC
Q psy5751 163 RNRVRRKVYSNCTYPFGL-SITDEKYYWTDWK------TNRIESANKEGER 206 (232)
Q Consensus 163 ~g~~~~~~~~~~~~p~gl-a~~~~~ly~td~~------~~~i~~~~~~g~~ 206 (232)
+|+..+.+....-....+ .++++.||++-.. ...|++++.+|..
T Consensus 352 ~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 352 DKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp TCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred CCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 988776665432222333 3567889888654 3478888887654
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.63 E-value=0.0085 Score=52.66 Aligned_cols=164 Identities=12% Similarity=0.097 Sum_probs=101.4
Q ss_pred EEEEEeCCCCEEEEEEcCCC--CcEEEEEcCCC--ceeEEEeCCCCCccEEEEeecCCeEEEEeCC---CCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADK--SSIKRAHLDGK--NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ---MDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~--~~i~~~~~~g~--~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~---~~~I~~~~~~g 75 (232)
.++.+.+..+.|+++..... ..|+.+++++. ....+. ......... +++.++.||+.... +.+|+++++++
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 46788888888877654321 27999998764 333333 333333332 55667888877543 47899999988
Q ss_pred CCC---EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751 76 DQP---KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA 152 (232)
Q Consensus 76 ~~~---~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~ 152 (232)
... +.+........ + +++.++.|+++.......+|+.++++|...+.+.... .....+++.+++++.|+++-+
T Consensus 315 ~~~~~~~~l~~~~~~~~-~--~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~-~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 315 PGPAHWRDLIPERQQVL-T--VHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPG-LGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp CCGGGCEEEECCCSSCE-E--EEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSS-SSEEEECCCCTTCSCEEEEEE
T ss_pred CCccccEEEecCCCCEE-E--EEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCC-CceEEeeecCCCCCEEEEEec
Confidence 664 55555333233 4 4444788888765433457899999876544432211 222335555667778877743
Q ss_pred C---CCcEEEEecCCCceEEEec
Q psy5751 153 D---SKSLECMTIRNRVRRKVYS 172 (232)
Q Consensus 153 ~---~~~i~~~~~~g~~~~~~~~ 172 (232)
. -..++.++++++..+.+.+
T Consensus 391 s~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 391 NYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp CSSSCCEEEEECTTTCCEEEEEC
T ss_pred CCCCCCEEEEEECCCCeEEEEEe
Confidence 2 3689999998777666643
No 229
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.59 E-value=0.019 Score=46.24 Aligned_cols=194 Identities=8% Similarity=-0.017 Sum_probs=115.0
Q ss_pred EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-----CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCE
Q psy5751 6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-----TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPK 79 (232)
Q Consensus 6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-----~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~ 79 (232)
.|.+..+..+++-..++ .|...++........+. ........+++.+..+.++.+-...+.|...|+.. ....
T Consensus 164 ~~~~~~~~~l~s~s~D~-~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 164 QYVPDQETRLITGSGDQ-TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV 242 (380)
T ss_dssp BCCSSSSSCEEEECTTS-CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred EEecCCCCEEEEECCCC-cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 34443344344444555 78888887554433332 12235567777665667777877788999999863 3333
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeCCCCEEEEEECC
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
..+.........++++| ++..+.+-.. .+.|...++............ .......+++++.+..| ++-..
T Consensus 243 ~~~~~h~~~v~~v~~~p-~~~~l~s~s~--D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~g~~ 318 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFP-DGQRFGTGSD--DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLL-FAGYS 318 (380)
T ss_dssp EEECCCSSCCCEEEECT-TSSEEEEECS--SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEE-EEECT
T ss_pred EEECCcCCCeEEEEEec-CCCeEEEEcC--CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEE-EEEEC
Confidence 34444556788999998 4555555433 456888888755433333221 01235789999985555 45566
Q ss_pred CCcEEEEecCCCceEEEec-----CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 154 SKSLECMTIRNRVRRKVYS-----NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~~~-----~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
.+.|...+........... .......+++. ++..++|-...+.|..-+..+
T Consensus 319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 7888888887554432221 22334577774 555556656567676666554
No 230
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.57 E-value=0.02 Score=45.85 Aligned_cols=158 Identities=12% Similarity=0.065 Sum_probs=97.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCC--eEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNR--VLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
..+++|.+.++.++++-..++ .|...+++.......... ......+++.+... .++++....+.|...++......
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDK-TLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTS-EEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred EEEEEEccCCCcEEEEEeCCC-eEEEeeCCCCccceeccC-CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 357888885555555555556 799999987654444432 34566777766432 24555556688999998876655
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE---------------cCCCCCcceEEEeCCC
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK---------------AADLKLPNSLAVDFRT 144 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~---------------~~~~~~p~~l~~d~~~ 144 (232)
..+.........++++|....++++... .+.|...++.......... .........+++++++
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASA--DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEET--TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcC--CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 5555455677899999966655555433 4557777775443111111 0112346788999976
Q ss_pred CEEEEEECCCCcEEEEecCC
Q psy5751 145 DELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 145 ~~Ly~~d~~~~~i~~~~~~g 164 (232)
..|+.+ ...+.|...+++.
T Consensus 258 ~~l~~~-~~dg~i~vwd~~~ 276 (408)
T 4a11_B 258 LHLLTV-GTDNRMRLWNSSN 276 (408)
T ss_dssp SEEEEE-ETTSCEEEEETTT
T ss_pred CEEEEe-cCCCeEEEEECCC
Confidence 666655 3456677777654
No 231
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.55 E-value=0.054 Score=50.50 Aligned_cols=157 Identities=9% Similarity=-0.036 Sum_probs=102.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
..+++|++....|..+. .++ .|...+.........+......+.++++.+.++.|. +-...+.|.+.++........
T Consensus 618 v~~~~~s~~~~~l~s~~-~d~-~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCG-ADK-TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA-TCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp EEEEEECTTSSEEEEEE-TTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEEEe-CCC-eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEECCCCceEEE
Confidence 35788998766665554 444 788889876554344444456788999998666665 444567899999987765555
Q ss_pred EeCCCCCceEEEEeCCCCe-EEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRK-LFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~-ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
+.........+++.+..+. ++.+... .+.|...+++.......+... .....++++++++..|..+ ...+.|...
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~-s~dg~v~vw 770 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSN--DFFLKLWDLNQKECRNTMFGH-TNSVNHCRFSPDDELLASC-SADGTLRLW 770 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEET--TSCEEEEETTSSSEEEEECCC-SSCEEEEEECSSTTEEEEE-ESSSEEEEE
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeC--CCeEEEEECCCcchhheecCC-CCCEEEEEEecCCCEEEEE-ECCCeEEEE
Confidence 5556667788888875333 3333322 456888888766544433332 4567788999976655544 445666666
Q ss_pred ecCCC
Q psy5751 161 TIRNR 165 (232)
Q Consensus 161 ~~~g~ 165 (232)
++...
T Consensus 771 d~~~~ 775 (1249)
T 3sfz_A 771 DVRSA 775 (1249)
T ss_dssp EGGGT
T ss_pred eCCCC
Confidence 66543
No 232
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.53 E-value=0.02 Score=44.92 Aligned_cols=195 Identities=9% Similarity=0.014 Sum_probs=118.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-----eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-----EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-----~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
.++++.+.+..++++-..++ .|...++.+... ...+.........+++.+.++.|+ +-...+.|...++....
T Consensus 21 ~~l~~~~~~~~~l~s~s~D~-~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~-s~s~D~~v~~wd~~~~~ 98 (319)
T 3frx_A 21 TSLATSAGQPNLLLSASRDK-TLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL-SASWDKTLRLWDVATGE 98 (319)
T ss_dssp EEEEECSSCTTEEEEEETTS-EEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE
T ss_pred EEEEccCCCccEEEEecCCc-cEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE-EEeCCCEEEEEECCCCC
Confidence 47788876545555555556 677777653221 112333445778889988666555 55566889999987665
Q ss_pred CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-----CEEEEEEC
Q psy5751 78 PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-----DELCWVDA 152 (232)
Q Consensus 78 ~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-----~~Ly~~d~ 152 (232)
....+.........+++++....|..... .+.|...++.+.....+... ......+.+.+.. +.++++-.
T Consensus 99 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~vwd~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 99 TYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIKVWTIKGQCLATLLGH--NDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEEEEETTSCEEEEECCC--SSCEEEEEECCC------CCEEEEEE
T ss_pred eeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeEEEEecc--CCcEEEEEEccCCCCCCCccEEEEEe
Confidence 54445556667889999985555544443 34577788876544333222 3455677776642 23455556
Q ss_pred CCCcEEEEecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 153 DSKSLECMTIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 153 ~~~~i~~~~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
..+.|...+++........ ........+++. ++.+..+-...+.|...+...
T Consensus 174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 6778888888765443322 233445677774 455555555567777777663
No 233
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.019 Score=50.91 Aligned_cols=197 Identities=9% Similarity=0.025 Sum_probs=117.3
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
..+++|++..+.|+.+. .++ .|...++.+.... ..+......+.++++.+.. +.+.++-...+.|...++++...
T Consensus 12 V~~l~~s~dg~~latg~-~dg-~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCS-SDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp EEEECCCSSSCCEEEEE-TTT-EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred eEEEEECCCCCeEEEEE-CCC-cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 34788888666555554 445 7888887743322 2233334567888887641 34444555668899999877642
Q ss_pred --EEEEeCCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCC---------
Q psy5751 79 --KVIVSKDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFR--------- 143 (232)
Q Consensus 79 --~~~~~~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~--------- 143 (232)
.............++++|. ...++.+.. .+.|...++.... ........ ......+++++.
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~-~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCCCCEEEECC-SSCEEEEEECCCC--------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCcceeEeecC-CCceEEEEecCcccccccccc
Confidence 2223345567789999986 445554443 4568888876552 22222222 456678888884
Q ss_pred ---CCEEEEEECCCCcEEEEecCCCce--EEEe---cCCCceEEEEEE-C---CEEEEEeCCCCcEEEEeCCC
Q psy5751 144 ---TDELCWVDADSKSLECMTIRNRVR--RKVY---SNCTYPFGLSIT-D---EKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 144 ---~~~Ly~~d~~~~~i~~~~~~g~~~--~~~~---~~~~~p~gla~~-~---~~ly~td~~~~~i~~~~~~g 204 (232)
++.+..+-...+.|...+++.... .... .......++++. . +.+.++-...+.|...+...
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 234444445567777777765422 1111 233445678874 4 57777766677788877764
No 234
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.49 E-value=0.04 Score=47.45 Aligned_cols=220 Identities=8% Similarity=0.021 Sum_probs=129.2
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-CC-E
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-QP-K 79 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~-~ 79 (232)
+..++|++..+.|..+. .+ .|...++........+.........+++.+.++.|. +-...+.|...++... .. .
T Consensus 21 ~~~~~~spdg~~l~~~~--~~-~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~la-sg~~d~~v~lWd~~~~~~~~~ 96 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCN--GT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCA-SGDVHGNVRIWDTTQTTHILK 96 (611)
T ss_dssp CCCCEECTTSSEEEEEE--TT-EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEESSSTTCCEE
T ss_pred eeEEeeCCCCCEEEeCC--CC-EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEE-EEeCCCCEEEeECCCCcceee
Confidence 45678999777887765 34 788888875444445544456788999999665554 5555688999998533 22 2
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE 158 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~ 158 (232)
..+........+++++|.+..|..+....+ .+.|+..+. +.....+ .. .....+.+++++++..+..+-+..+.|.
T Consensus 97 ~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l-~g-h~~~v~~v~f~p~~~~~l~s~s~D~~v~ 173 (611)
T 1nr0_A 97 TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNL-TG-QARAMNSVDFKPSRPFRIISGSDDNTVA 173 (611)
T ss_dssp EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCC-CC-CSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred EeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCccee-cC-CCCCceEEEECCCCCeEEEEEeCCCeEE
Confidence 233334456789999997666665543311 134554442 1111111 11 1345678999998665556656677777
Q ss_pred EEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEec----cCCcceeEEEEEEcC
Q psy5751 159 CMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALD----MMGTTYMYGIAAVPS 228 (232)
Q Consensus 159 ~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~----~~~~~~p~gi~~~~~ 228 (232)
..+....+.. .+........++++. ++.++.+-...+.|...+.. |.....+... ..+......+++-++
T Consensus 174 lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 174 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred EEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence 7776644332 222234446688884 56666666667778888754 3332222110 023445666666544
No 235
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.47 E-value=0.036 Score=51.71 Aligned_cols=191 Identities=8% Similarity=-0.041 Sum_probs=114.4
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC------
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ------ 77 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~------ 77 (232)
+++|++....++.+. .++ .|...+++..............+.++++.+.++.|+ +-...+.|...++....
T Consensus 845 ~~~~sp~~~~l~~~~-~dg-~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~-s~s~dg~v~vw~~~~~~~~~~~~ 921 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIAL-SQY-CVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL-TASDDQTIRVWETKKVCKNSAIV 921 (1249)
T ss_dssp EEEECSSTTEEEEEC-SSS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEEHHHHHSCCSSS
T ss_pred EEEEcCCCCEEEEEe-CCC-eEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE-EEeCCCeEEEEEccccceeeeec
Confidence 567777666555443 444 688888886554444444556788999998666555 44455677777643210
Q ss_pred -----------------------CEEEEe--------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE
Q psy5751 78 -----------------------PKVIVS--------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF 126 (232)
Q Consensus 78 -----------------------~~~~~~--------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~ 126 (232)
...+.. ........++++|....+..... .+.|...++........
T Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~---~g~i~i~d~~~~~~~~~ 998 (1249)
T 3sfz_A 922 LKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDE---DGAIKIIELPNNRVFSS 998 (1249)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEET---TSCCEEEETTTTSCEEE
T ss_pred ccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcC---CCCEEEEEcCCCceeee
Confidence 000000 01234677889986666666553 35577777765544333
Q ss_pred EEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 127 LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 127 ~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.... .....++++++++..|. +-...+.|...++..+....+.........+++. ++.+ ++-...+.|...+..
T Consensus 999 ~~~h-~~~v~~l~~s~dg~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 999 GVGH-KKAVRHIQFTADGKTLI-SSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRL-LSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp CCCC-SSCCCCEEECSSSSCEE-EECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEE-EEEESSSEEEEEETT
T ss_pred cccC-CCceEEEEECCCCCEEE-EEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcE-EEEECCCcEEEEECC
Confidence 3222 45678899999866665 4456788888888876544333333445566665 4444 444445677777765
No 236
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.45 E-value=0.017 Score=45.23 Aligned_cols=154 Identities=6% Similarity=-0.081 Sum_probs=96.9
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----CEEEEeCCCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEe
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ----PKVIVSKDLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~ 117 (232)
-..+.++++.+.++.|+.+. ..+.|...+++... ...+. ........++++|... .|+.... .+.|...+
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~~wd 85 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTV---QGEILKVD 85 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEET---TSCEEEEC
T ss_pred CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcC---CCeEEEEE
Confidence 35678899998667666554 55788888887665 33333 3555778999998655 5666553 45689999
Q ss_pred C-CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC---------CceEEEecCCCceEEEEEECCEE
Q psy5751 118 L-DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN---------RVRRKVYSNCTYPFGLSITDEKY 187 (232)
Q Consensus 118 ~-~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g---------~~~~~~~~~~~~p~gla~~~~~l 187 (232)
+ ++.....+.....-.....+++++ ++.|+.+ ...+.|...+++. ............+.++++..+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 163 (342)
T 1yfq_A 86 LIGSPSFQALTNNEANLGICRICKYG-DDKLIAA-SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL 163 (342)
T ss_dssp SSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEE-ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred eccCCceEeccccCCCCceEEEEeCC-CCEEEEE-cCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcE
Confidence 8 766553332200145667999999 5666554 5567788877763 22111112334456777776665
Q ss_pred EEEeCCCCcEEEEeCCC
Q psy5751 188 YWTDWKTNRIESANKEG 204 (232)
Q Consensus 188 y~td~~~~~i~~~~~~g 204 (232)
+.+ ...+.|...+...
T Consensus 164 ~~~-~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 164 IVG-MNNSQVQWFRLPL 179 (342)
T ss_dssp EEE-ESTTEEEEEESSC
T ss_pred EEE-eCCCeEEEEECCc
Confidence 555 4456788888765
No 237
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.43 E-value=0.052 Score=47.44 Aligned_cols=197 Identities=11% Similarity=0.045 Sum_probs=125.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
..++++++.+..++++-..++ .|...++.... ....+......+..+++.+.++.|. +-...+.|.+.++...
T Consensus 385 V~~v~~~~~~~~~l~s~s~D~-~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASRDK-SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLAAG 462 (694)
T ss_dssp EEEEECCTTCCSEEEEEETTS-EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT
T ss_pred eEEEEecCCCCCEEEEEeCCC-cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEE-EEeCCCcEEEEECCCC
Confidence 357788876666777766666 78888876422 1223334446788899988666554 6556689999998776
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--CCCCcceEEEeCCC-CEEEEEECC
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--DLKLPNSLAVDFRT-DELCWVDAD 153 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--~~~~p~~l~~d~~~-~~Ly~~d~~ 153 (232)
.....+..+.....+++++|.+..|..+.. .+.|...+..+.....+.... ......++++++.. ..+.++-+.
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASR---DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEEEEEeC---CCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence 554445556667889999986666655543 345777776654333332211 12345788898864 234555566
Q ss_pred CCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 154 SKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 154 ~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.+.|...+++......... .......+++. ++.+..+-...+.|...+..
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 7888888888765543333 34445678885 55666666666777777765
No 238
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.40 E-value=0.032 Score=44.40 Aligned_cols=193 Identities=8% Similarity=-0.087 Sum_probs=106.4
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN---VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-- 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-- 77 (232)
.+++|++..+.|+.+. .++ .|...++.... ....+......+..+++.+.++.|+.+. ..+.|...+++...
T Consensus 59 ~~~~~s~~~~~l~s~s-~d~-~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 59 TCVDWAPKSNRIVTCS-QDR-NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDW 135 (377)
T ss_dssp EEEEECTTTCCEEEEE-TTS-SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----C
T ss_pred EEEEEeCCCCEEEEEe-CCC-eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccc
Confidence 5788988666665554 344 68888877544 2222223345778888888666666444 45788888887764
Q ss_pred -CEEEEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC---------------cEEEEEc-CCCCCcceEE
Q psy5751 78 -PKVIVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD---------------REIFLKA-ADLKLPNSLA 139 (232)
Q Consensus 78 -~~~~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~---------------~~~~~~~-~~~~~p~~l~ 139 (232)
....+.. .......++++|....|..... .+.|...++.... ...+... ........++
T Consensus 136 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 212 (377)
T 3dwl_C 136 WVSKHLKRPLRSTILSLDWHPNNVLLAAGCA---DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVG 212 (377)
T ss_dssp CCCEEECSSCCSCEEEEEECTTSSEEEEEES---SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEE
T ss_pred eeeeEeecccCCCeEEEEEcCCCCEEEEEeC---CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEE
Confidence 2333333 5567789999985555555543 3456666653211 1111111 1134567899
Q ss_pred EeCCCCEEEEEECCCCcEEEEecCCCce-----EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 140 VDFRTDELCWVDADSKSLECMTIRNRVR-----RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 140 ~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-----~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+++++..|+.+ ...+.|...+++.... ..+........++++. ++.+..+-.. +.+..+...
T Consensus 213 ~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~~~~~~ 280 (377)
T 3dwl_C 213 FSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYN-YSPILLQGN 280 (377)
T ss_dssp ECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESS-SSEEEECCC
T ss_pred ECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC-CcEEEEEeC
Confidence 99986666655 4566777777775543 2222233445678874 6666665544 445566655
No 239
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.032 Score=44.15 Aligned_cols=194 Identities=8% Similarity=0.023 Sum_probs=112.6
Q ss_pred EEEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCce--eEEEeCCCCCccEEEEeec--CCeEEEEeCCCCeEEEEeCCCC
Q psy5751 3 IGITVDCV--EGQVYYSSVADKSSIKRAHLDGKNV--EDVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 3 ~~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.+++|.+. .+.|+.+. .++ .|...+++.... ..........+..+++.+. ++.|+ +-...+.|...++...
T Consensus 59 ~~~~~~~~~~~~~l~s~~-~dg-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 59 WRVDWAHPKFGTILASCS-YDG-KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEEEECCGGGCSEEEEEE-TTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSEEEEEECCTT
T ss_pred EEEEeCCCCCCCEEEEec-cCC-EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEE-EecCCCcEEEEecCCC
Confidence 46777654 45555544 445 688888876542 2223333467888999886 45554 5556688999998776
Q ss_pred C--CEEEEeCCCCCceEEEEeCC-------------CCeEEEEEcCCCCCcEEEEeCCCCCcE-EEEE--cCCCCCcceE
Q psy5751 77 Q--PKVIVSKDLVNPRGIVVHPY-------------YRKLFWSDWNRSGPKIEWSNLDGTDRE-IFLK--AADLKLPNSL 138 (232)
Q Consensus 77 ~--~~~~~~~~~~~p~~iavd~~-------------~~~ly~~d~~~~~~~I~~~~~~g~~~~-~~~~--~~~~~~p~~l 138 (232)
. ..............++++|. ...|..... .+.|...++...... .+.. .........+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC---CCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 3 33444455566789999984 444444443 345777776544322 1211 1113456789
Q ss_pred EEeCCC--CEEEEEECCCCcEEEEecCCCc---eEEEecC---CCceEEEEEE-CC-EEEEEeCCCCcEEEEeCC
Q psy5751 139 AVDFRT--DELCWVDADSKSLECMTIRNRV---RRKVYSN---CTYPFGLSIT-DE-KYYWTDWKTNRIESANKE 203 (232)
Q Consensus 139 ~~d~~~--~~Ly~~d~~~~~i~~~~~~g~~---~~~~~~~---~~~p~gla~~-~~-~ly~td~~~~~i~~~~~~ 203 (232)
+++++. +.+..+-...+.|...+++... ...+... ......+++. ++ .|+.+.. .+.|...+..
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 999983 4555555567778777777543 2333332 2334577774 44 4444443 5666666654
No 240
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.39 E-value=0.029 Score=43.54 Aligned_cols=196 Identities=13% Similarity=0.027 Sum_probs=110.4
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc----eeEEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~----~~~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
..+++|++....|+.+. .++ .|...+++... ....+......+..+++.+. .+.++++-...+.|...+++..
T Consensus 14 v~~~~~~~~~~~l~~~~-~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCS-SDQ-HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp EEEEEECSSSSEEEEEE-TTS-EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred eeEEEEcCCCCEEEEee-CCC-eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 35789998666665554 444 68888887432 11222334467788888774 2344445555678998888765
Q ss_pred CC---------EEEEeCCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCCc-EEE-----EEc------CCCC
Q psy5751 77 QP---------KVIVSKDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTDR-EIF-----LKA------ADLK 133 (232)
Q Consensus 77 ~~---------~~~~~~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~-----~~~------~~~~ 133 (232)
.. ...+........+++++|. ...|+.+.. .+.|...++..... ..+ ... ....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ 168 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChHHhccccccccccccccccCCccc
Confidence 31 2233345566789999986 455555543 45677777654321 100 000 1134
Q ss_pred CcceEEEeCC---CCEEEEEECCCCcEEEEecCCCceEEEec---CCCceEEEEEE-CC----EEEEEeCCCCcEEEEeC
Q psy5751 134 LPNSLAVDFR---TDELCWVDADSKSLECMTIRNRVRRKVYS---NCTYPFGLSIT-DE----KYYWTDWKTNRIESANK 202 (232)
Q Consensus 134 ~p~~l~~d~~---~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---~~~~p~gla~~-~~----~ly~td~~~~~i~~~~~ 202 (232)
....+++++. ...|..+. ..+.+............+.. ......++++. .+ .++.+-...+.|...+.
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred ceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence 5568888875 45555444 34444443444333322322 23345677775 33 66666666677777766
Q ss_pred C
Q psy5751 203 E 203 (232)
Q Consensus 203 ~ 203 (232)
.
T Consensus 248 ~ 248 (351)
T 3f3f_A 248 T 248 (351)
T ss_dssp E
T ss_pred C
Confidence 5
No 241
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.34 E-value=0.042 Score=44.20 Aligned_cols=111 Identities=9% Similarity=0.075 Sum_probs=68.6
Q ss_pred CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751 88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR 165 (232)
Q Consensus 88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~ 165 (232)
....+++.+.++.++.+-.. .+.|...++... ....+ .. .....+.+++++++. .+.+-+..+.|...++..+
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~--D~~v~~wd~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSC--DTTVRLWDLRITSRAVRTY-HG-HEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CEEEEEECSSSCCEEEEEET--TSCEEEEETTTTCCCCEEE-CC-CSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTT
T ss_pred CeEEEEeecCCCCEEEEEEC--CCeEEEEECCCCCcceEEE-CC-cCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCC
Confidence 44567777656666666543 456777777532 22322 22 145678999999854 4456677888999998866
Q ss_pred ceEEEecC--------CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 166 VRRKVYSN--------CTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 166 ~~~~~~~~--------~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
........ .....++++. .+.+.++-...+.|...+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 54333221 1124577774 56666666667888888765
No 242
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.33 E-value=0.036 Score=43.24 Aligned_cols=195 Identities=11% Similarity=0.009 Sum_probs=107.5
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.++.|.+....|+.+. .++ .|.......................+...+.++.|+ +-...+.+...+..+.......
T Consensus 90 ~~~~~s~dg~~l~s~~-~d~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~s~d~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 90 SDVVISSDGQFALSGS-WDG-TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEEC
T ss_pred EEEEECCCCCEEEEEc-ccc-cceEEeecccceeeeecCCCCceeEEEEeecCccce-eecCCCeEEEEEeCCCceEEEE
Confidence 4678887555555444 344 677777776554444444445556666666555554 4445567777777665443332
Q ss_pred e-CCCCCceEEEEeCCCCe-EEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 83 S-KDLVNPRGIVVHPYYRK-LFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 83 ~-~~~~~p~~iavd~~~~~-ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
. ........+++.+.... ++++... .+.|...++........+... -...+.+++++++..|+ +-...+.|...
T Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~s~~~--d~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~-s~s~Dg~i~iw 242 (340)
T 4aow_A 167 DESHSEWVSCVRFSPNSSNPIIVSCGW--DKLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCA-SGGKDGQAMLW 242 (340)
T ss_dssp SSSCSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEE-EEETTCEEEEE
T ss_pred eccccCcccceEEccCCCCcEEEEEcC--CCEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEE-EEeCCCeEEEE
Confidence 2 23344566677654433 3333322 355777777755443333322 34567899999855554 44557788888
Q ss_pred ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751 161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g 204 (232)
+++................+++..+..+++-...+.|...+..+
T Consensus 243 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 243 DLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred EeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCC
Confidence 88865543333333334455553222233333345565555543
No 243
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.039 Score=48.92 Aligned_cols=195 Identities=8% Similarity=-0.006 Sum_probs=114.7
Q ss_pred EEEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeec--CCeEEEEeCCCCeEEEEeCCCC
Q psy5751 3 IGITVDCV--EGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 3 ~~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
.+++|.+. .+.|+.+. .++ .|...++++.... .........+..+++.+. ++.+ ++-...+.|...++...
T Consensus 57 ~~l~~s~~~~~~~l~s~s-~Dg-~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l-~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCS-YDG-KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEEECCTTSCSEEEEEE-TTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCSS
T ss_pred EEEEecCCCCCCEEEEEe-CCC-eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEE-EEEeCCCcEEEEEeecC
Confidence 47788765 44454444 445 6888888765422 223334467888999886 4444 45556689999998776
Q ss_pred C--CEEEEeCCCCCceEEEEeCC-------------CCeEEEEEcCCCCCcEEEEeCCCCCcE--EEEE-cCCCCCcceE
Q psy5751 77 Q--PKVIVSKDLVNPRGIVVHPY-------------YRKLFWSDWNRSGPKIEWSNLDGTDRE--IFLK-AADLKLPNSL 138 (232)
Q Consensus 77 ~--~~~~~~~~~~~p~~iavd~~-------------~~~ly~~d~~~~~~~I~~~~~~g~~~~--~~~~-~~~~~~p~~l 138 (232)
. ..............++.+|. ...|..+.. .+.|...++...... .... ...-....++
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~---dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l 210 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC---CCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence 3 23334445566788999874 344444443 345777766544322 2111 1113456789
Q ss_pred EEeCCC--CEEEEEECCCCcEEEEecCCCceE---EEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 139 AVDFRT--DELCWVDADSKSLECMTIRNRVRR---KVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 139 ~~d~~~--~~Ly~~d~~~~~i~~~~~~g~~~~---~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+++++. +.+..+-...+.|...+++..... .+.. ......++++. ++..+++-...+.|...+..
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 999983 455555556777888877754211 1211 22334577774 55555555556777777765
No 244
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.27 E-value=0.044 Score=44.60 Aligned_cols=157 Identities=10% Similarity=0.032 Sum_probs=90.9
Q ss_pred CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCEEEE-------eCCCCCceEEEEeCCC-CeEEEEEcCCCCCc
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPKVIV-------SKDLVNPRGIVVHPYY-RKLFWSDWNRSGPK 112 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~-------~~~~~~p~~iavd~~~-~~ly~~d~~~~~~~ 112 (232)
....+..+++.+.++.|. +- ..+.|...++.. .....++ .........++++|.+ ..|+.... .+.
T Consensus 176 h~~~v~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---dg~ 250 (447)
T 3dw8_B 176 HTYHINSISINSDYETYL-SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS---KGT 250 (447)
T ss_dssp CSSCCCEEEECTTSSEEE-EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET---TSC
T ss_pred CCcceEEEEEcCCCCEEE-Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC---CCe
Confidence 345678899998655554 44 578999999883 2222222 1234457899999865 44444443 356
Q ss_pred EEEEeCCCCCc----EEEEEcCCCC------------CcceEEEeCCCCEEEEEECCCCcEEEEecCC-Cc-eEEEecC-
Q psy5751 113 IEWSNLDGTDR----EIFLKAADLK------------LPNSLAVDFRTDELCWVDADSKSLECMTIRN-RV-RRKVYSN- 173 (232)
Q Consensus 113 I~~~~~~g~~~----~~~~~~~~~~------------~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-~~-~~~~~~~- 173 (232)
|...++..... ...+... .. ....+++++++..|..+.. +.|...+++. .. ...+...
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEP-EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCG
T ss_pred EEEEECcCCccccceeeEeccC-CCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccc
Confidence 88888776543 2222221 21 5689999998666665554 8888888864 22 2222111
Q ss_pred -CCc-------------eEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751 174 -CTY-------------PFGLSIT-DEKYYWTDWKTNRIESANKEGER 206 (232)
Q Consensus 174 -~~~-------------p~gla~~-~~~ly~td~~~~~i~~~~~~g~~ 206 (232)
... ...+++. ++...++-...+.|...+..+..
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 000 1236663 33334555556777777766443
No 245
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.22 E-value=0.046 Score=42.37 Aligned_cols=157 Identities=13% Similarity=0.041 Sum_probs=86.6
Q ss_pred eEEEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCc---------eeEEEeCCCCCccEEEEeec--CCeEEEEeCCCCeE
Q psy5751 2 LIGITVDCV--EGQVYYSSVADKSSIKRAHLDGKN---------VEDVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTI 68 (232)
Q Consensus 2 ~~~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~---------~~~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I 68 (232)
..+++|.+. .+.|+.+. .++ .|...+++... ....+......+.++++.+. ++.|+ +-...+.|
T Consensus 60 v~~~~~~~~~d~~~l~s~~-~dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v 136 (351)
T 3f3f_A 60 IVAIDWASPEYGRIIASAS-YDK-TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA-CLGNDGIL 136 (351)
T ss_dssp EEEEEECCGGGCSEEEEEE-TTS-CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTCEE
T ss_pred EEEEEEcCCCCCCEEEEEc-CCC-eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE-EecCCCcE
Confidence 357888874 44444444 445 68888887542 11223333467788999886 55555 44456789
Q ss_pred EEEeCCCCCC-EEE-----Ee-------CCCCCceEEEEeCC---CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CC
Q psy5751 69 SMANLNDDQP-KVI-----VS-------KDLVNPRGIVVHPY---YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-AD 131 (232)
Q Consensus 69 ~~~~~~g~~~-~~~-----~~-------~~~~~p~~iavd~~---~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~ 131 (232)
...++..... ..+ .. ........++.+|. ...|..+... +.+............+... ..
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~h 213 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE---QAIIYQRGKDGKLHVAAKLPGH 213 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT---EEEEEEECTTSCEEEEEECCCC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC---CcEEEEccCCCceeeeeecCCC
Confidence 9999765431 110 00 23445577888875 4445444432 2343333333333222222 11
Q ss_pred CCCcceEEEeCCCC---EEEEEECCCCcEEEEecCC
Q psy5751 132 LKLPNSLAVDFRTD---ELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 132 ~~~p~~l~~d~~~~---~Ly~~d~~~~~i~~~~~~g 164 (232)
-....++++++.++ .++.+-...+.|...+++.
T Consensus 214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 34567899999852 5555555566676666654
No 246
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.22 E-value=0.035 Score=41.54 Aligned_cols=144 Identities=13% Similarity=0.023 Sum_probs=89.3
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-------ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC--C
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGK-------NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL--N 74 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-------~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~--~ 74 (232)
.++|++ ++.||.+ .++ .|++.+.... ....+-..+-+.-..+.+|+ ++.||.+ .++.|++.+. +
T Consensus 45 ~laf~P-~G~LYaV--~~G-~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 45 FLFLSP-GGELYGV--LND-KIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp EEEECT-TSCEEEE--ETT-EEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCCS
T ss_pred eEEECC-CccEEEE--eCC-eEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCcC
Confidence 689999 8899998 445 8999987531 11233233334457788997 7889988 3389999986 3
Q ss_pred CCC-----CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CC------CcEEEEEcCCCCCcceEEEeC
Q psy5751 75 DDQ-----PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GT------DREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 75 g~~-----~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~------~~~~~~~~~~~~~p~~l~~d~ 142 (232)
+.. -..+.......-..++.+| +|.||-.. + +++++...- +. ..+.+.... -..-.-+.+++
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d---g~lyr~~~P~~~~~~wl~~~~~~g~~g-~~~yr~l~f~~ 191 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G---QQFYKALPPVSNQDNWLARATKIGQGG-WDTFKFLFFSS 191 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T---TEEEEECCCSSTTCCHHHHCEEEESSS-GGGEEEEEECT
T ss_pred CCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C---CcEEecCCCCCCCcccccccceeccCC-cceEEEEEECC
Confidence 332 2334444556678899998 89999888 4 347664432 11 112222121 11112245555
Q ss_pred CCCEEEEEECCCCcEEEEecC
Q psy5751 143 RTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
. +.||.++ .+++++...+
T Consensus 192 ~-G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 192 V-GTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp T-SCEEEEE--TTEEEEESCC
T ss_pred C-CcEEEEe--CCeEEecCCc
Confidence 4 7888887 6778777555
No 247
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.21 E-value=0.063 Score=43.68 Aligned_cols=203 Identities=7% Similarity=0.048 Sum_probs=115.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-----------eeEEEeCCC------------CCccEEEEeecCC-e
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-----------VEDVITTNI------------RSPEGLTFDWVNR-V 57 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-----------~~~~~~~~~------------~~p~gl~~d~~~~-~ 57 (232)
..+++|++..+.|..+. .++ .|...+++... ....+.... ..+..+++.+.++ .
T Consensus 31 V~~v~~s~~g~~la~g~-~dg-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGD-KGG-RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp EEEEEECSSSSEEEEEE-TTS-EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred EEEEEECCCCCEEEEEc-CCC-eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 35789999666665554 344 68888877543 122222222 4578899988652 3
Q ss_pred EEEEeCCCCeEEEEeCCCCCCE----------------------------------------EEEeCCCCCceEEEEeCC
Q psy5751 58 LYWTDSQMDTISMANLNDDQPK----------------------------------------VIVSKDLVNPRGIVVHPY 97 (232)
Q Consensus 58 ly~~d~~~~~I~~~~~~g~~~~----------------------------------------~~~~~~~~~p~~iavd~~ 97 (232)
.+++-...+.|...++...... .+..........++++|.
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 4445556677877776542210 112234556789999984
Q ss_pred CCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEE------cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce---
Q psy5751 98 YRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLK------AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR--- 167 (232)
Q Consensus 98 ~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~------~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~--- 167 (232)
+.++.+. . .+.|...++..... ..++. ...-.....+++++.+..++.+-...+.|...+++....
T Consensus 189 -~~~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 189 -YETYLSA-D--DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp -SSEEEEE-C--SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred -CCEEEEe-C--CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 5555554 2 56788888873222 11110 111345689999998634555556678888888886553
Q ss_pred --EEEecCCC------------ceEEEEEE-CCEEEEEeCCCCcEEEEeCC--CCCcceEE
Q psy5751 168 --RKVYSNCT------------YPFGLSIT-DEKYYWTDWKTNRIESANKE--GERAPSIA 211 (232)
Q Consensus 168 --~~~~~~~~------------~p~gla~~-~~~ly~td~~~~~i~~~~~~--g~~~~~i~ 211 (232)
..+..... ....+++. ++.+..+-.. +.|...+.. +.....+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 33432222 45678885 4444444444 778777765 44444443
No 248
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.21 E-value=0.053 Score=42.84 Aligned_cols=191 Identities=12% Similarity=0.039 Sum_probs=106.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++....|+ +-..++ .|...++........+......+.++++.+.++.|+ +-...+.|...++.+.......
T Consensus 80 ~~~~~~~~~~~l~-s~s~D~-~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 80 SDLALSQENCFAI-SSSWDK-TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSA 156 (343)
T ss_dssp EEEEECSSTTEEE-EEETTS-EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEE-EEETTSCEEEEESSSCEEEECC
T ss_pred EEEEECCCCCEEE-EEcCCC-cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEE-EEcCCCEEEEEeccCCceeeee
Confidence 4678887555554 444455 788888875543334444446788999998776665 4445678999998754322211
Q ss_pred e--CCCCCceEEEEeCCC----------CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751 83 S--KDLVNPRGIVVHPYY----------RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV 150 (232)
Q Consensus 83 ~--~~~~~p~~iavd~~~----------~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~ 150 (232)
. ........++..|.. ..|..... .+.|...+..+.....+ ... -.....+++++++..|. +
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~-~~h-~~~v~~~~~s~~g~~l~-s 230 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW---DGRLKVWNTNFQIRYTF-KAH-ESNVNHLSISPNGKYIA-T 230 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET---TSEEEEEETTTEEEEEE-ECC-SSCEEEEEECTTSSEEE-E
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcC---CCEEEEEcCCCceeEEE-cCc-cccceEEEECCCCCEEE-E
Confidence 1 122334567777643 23333332 35677777543322222 221 45678999999855554 4
Q ss_pred ECCCCcEEEEecC-CCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 151 DADSKSLECMTIR-NRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 151 d~~~~~i~~~~~~-g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
-...+.|...++. ................+++. .+.+. +-...+.|...+..
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~l-a~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWV-AVGTDQGVKIFNLM 284 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEE-EEEESSCEEEEESS
T ss_pred EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEE-EEECCCCEEEEEeC
Confidence 4567788888874 33222222222335677774 33322 22234456666655
No 249
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.21 E-value=0.057 Score=43.05 Aligned_cols=196 Identities=7% Similarity=-0.091 Sum_probs=120.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ---- 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~---- 77 (232)
..+++|++....|+-+ ..++ .|...+.........+.........+++.+.+..| .+-...+.+...++....
T Consensus 67 V~~~~~s~d~~~l~s~-s~Dg-~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-asg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 67 VLCMDWCKDKRRIVSS-SQDG-KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI-ACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp EEEEEECTTSSEEEEE-ETTS-EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEE-EEESTTSEEEEEECCCCTTCCS
T ss_pred EEEEEECCCCCEEEEE-eCCC-eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEE-EEeeCCCCEEEEEEeccccccc
Confidence 3578898866555544 4455 78888877555444444445678899999865544 466666788888765321
Q ss_pred --CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC-CCEEEEEECCC
Q psy5751 78 --PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR-TDELCWVDADS 154 (232)
Q Consensus 78 --~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~-~~~Ly~~d~~~ 154 (232)
....+.........+++.+....|+.+.. .+.|...++........+... -.....+++.+. .+.++++-...
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASG---DGTCALWDVESGQLLQSFHGH-GADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEECCCSSCCEEEEEETT
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeCCCCCEEEEEeCC
Confidence 11222224456678888886666665553 356888888765544333332 344567788774 24555555667
Q ss_pred CcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751 155 KSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g 204 (232)
+.|...+++......... ......++++. ++.++.+-...+.|...+...
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 889999988665433333 33445677775 455555555567777777653
No 250
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.20 E-value=0.0029 Score=55.53 Aligned_cols=197 Identities=6% Similarity=-0.037 Sum_probs=110.7
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC------------------CCccEEEEeecCCeEEEEeCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI------------------RSPEGLTFDWVNRVLYWTDSQM 65 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~------------------~~p~gl~~d~~~~~ly~~d~~~ 65 (232)
+++|.+..+.|.++. ++ .|+..++.+.....+...+- ....++++.+.++.|+++....
T Consensus 114 ~~~~SPDG~~la~~~--~~-~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 114 YLCWSPVGSKLAYVY--QN-NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp CEEECSSTTCEEEEE--TT-EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred cceECCCCCEEEEEE--CC-eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 467888777777764 34 78888887655433322211 1124788888888887764221
Q ss_pred ---------------------------------CeEEEEeCCCCCCE---EEE-----eCCCCCceEEEEeCCCCeEEEE
Q psy5751 66 ---------------------------------DTISMANLNDDQPK---VIV-----SKDLVNPRGIVVHPYYRKLFWS 104 (232)
Q Consensus 66 ---------------------------------~~I~~~~~~g~~~~---~~~-----~~~~~~p~~iavd~~~~~ly~~ 104 (232)
..|.+.++++.... .+. .........++..|. +.+.++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~ 269 (719)
T 1z68_A 191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQ 269 (719)
T ss_dssp TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEE
T ss_pred CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEE
Confidence 15666777664421 111 012223467888885 666665
Q ss_pred --EcCCCCCcEEEEe----CCCCCcEEEE----EcCCCCCcc-----eEEEeCCCCEEEEE-ECC--CCcEEEEecCCCc
Q psy5751 105 --DWNRSGPKIEWSN----LDGTDREIFL----KAADLKLPN-----SLAVDFRTDELCWV-DAD--SKSLECMTIRNRV 166 (232)
Q Consensus 105 --d~~~~~~~I~~~~----~~g~~~~~~~----~~~~~~~p~-----~l~~d~~~~~Ly~~-d~~--~~~i~~~~~~g~~ 166 (232)
+......+|+..+ +++.....+. ... -.... .++++++++.|++. ... ..+|+.++++++.
T Consensus 270 ~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 270 WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR-TGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS-SSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred EeccccCeEEEEEEcccCCCCCCceEEEEecccccC-CceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 3222234688888 6544332222 111 11222 77899988877763 322 3479999998876
Q ss_pred eEEEecCCCceEEEEE-ECCEEEEEeCC------CCcEEEEeCCCC
Q psy5751 167 RRKVYSNCTYPFGLSI-TDEKYYWTDWK------TNRIESANKEGE 205 (232)
Q Consensus 167 ~~~~~~~~~~p~gla~-~~~~ly~td~~------~~~i~~~~~~g~ 205 (232)
.+.+........++.. +++.||++... ...+++++.+++
T Consensus 349 ~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 349 AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 5544332222223332 56788887653 346777776533
No 251
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.19 E-value=0.057 Score=42.81 Aligned_cols=192 Identities=9% Similarity=-0.010 Sum_probs=109.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.+++|++....|. +-..++ .|...++++.... ..+ ......+..+++.+.++.|. +-...+.|...+.+.....
T Consensus 20 ~~l~~sp~g~~la-s~~~D~-~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~-s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 20 WFLAWNPAGTLLA-SCGGDR-RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA-SASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp EEEEECTTSSCEE-EEETTS-CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEE-EEETTSCEEEEEECCC-EE
T ss_pred EEEEECCCCCEEE-EEcCCC-eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEE-EEECCCcEEEEEccCCCeE
Confidence 4788998555554 444445 6888887765421 222 22345678899998666665 4445567777776654422
Q ss_pred --EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE-EE-EEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751 80 --VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE-IF-LKAADLKLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 80 --~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~-~~-~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
..+.........++++|.+..|..+.. .+.|...+++..... .+ ...........+++++.+..|..+ ...+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~ 172 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA-SYDD 172 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE-ETTS
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE-eCCC
Confidence 233345566789999985555554443 345777776654322 22 112213456789999986655544 4566
Q ss_pred cEEEEecCCCceE---EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751 156 SLECMTIRNRVRR---KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 156 ~i~~~~~~g~~~~---~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~ 201 (232)
.|...+.+..... .+........++++. ++....+-...+.|...+
T Consensus 173 ~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 173 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 6766666654322 222233445677874 444444544455555444
No 252
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.18 E-value=0.055 Score=42.43 Aligned_cols=193 Identities=8% Similarity=-0.036 Sum_probs=110.7
Q ss_pred EEEEEeCCC--CEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCCCCccEEEE------eecCCeEEEEeCCCCeEEEEeC
Q psy5751 3 IGITVDCVE--GQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTF------DWVNRVLYWTDSQMDTISMANL 73 (232)
Q Consensus 3 ~~i~~d~~~--~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~~~p~gl~~------d~~~~~ly~~d~~~~~I~~~~~ 73 (232)
.+++|.+.. +.++++-..++ .|...++.... ....+......+..++. .+.++.|+ +-...+.|...++
T Consensus 69 ~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~-~~~~d~~i~vwd~ 146 (357)
T 3i2n_A 69 KCGTFGATSLQQRYLATGDFGG-NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIV-TGSRDGTVKVWDP 146 (357)
T ss_dssp EEEECTTCCTTTCCEEEEETTS-CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEE-EEETTSCEEEECT
T ss_pred EEEEEcCCCCCCceEEEecCCC-eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEE-EEeCCCeEEEEeC
Confidence 467787753 34444444445 78888888654 33344333455666643 34344454 5555678999998
Q ss_pred CCCC-CEEEEeCC----CCCceEEE----EeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC--
Q psy5751 74 NDDQ-PKVIVSKD----LVNPRGIV----VHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF-- 142 (232)
Q Consensus 74 ~g~~-~~~~~~~~----~~~p~~ia----vd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~-- 142 (232)
.... ....+... ......++ +++....|+.+.. .+.|...++........... ......+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 147 RQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD---NGDIKLFDLRNMALRWETNI--KNGVCSLEFDRKD 221 (357)
T ss_dssp TSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEESCSS
T ss_pred CCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc---CCeEEEEECccCceeeecCC--CCceEEEEcCCCC
Confidence 7765 33333311 12445666 4554454544442 45788888887655433332 45678999998
Q ss_pred -CCCEEEEEECCCCcEEEEecCCCce-EEEe-----cCCCceEEEEEE-CCE-EEEEeCCCCcEEEEeCC
Q psy5751 143 -RTDELCWVDADSKSLECMTIRNRVR-RKVY-----SNCTYPFGLSIT-DEK-YYWTDWKTNRIESANKE 203 (232)
Q Consensus 143 -~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~-----~~~~~p~gla~~-~~~-ly~td~~~~~i~~~~~~ 203 (232)
.++.|+.+ ...+.|...+++.... ..+. ........+++. .+. ++++-...+.|...+..
T Consensus 222 ~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 222 ISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp SSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 65666555 5567777777764321 1111 334445677775 344 66666666777776654
No 253
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.18 E-value=0.056 Score=44.63 Aligned_cols=223 Identities=6% Similarity=-0.078 Sum_probs=124.7
Q ss_pred eEEEEEeCCCCEEEE---EEcCCCCcEEEEEcCCC-----ce----eEE--EeCCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751 2 LIGITVDCVEGQVYY---SSVADKSSIKRAHLDGK-----NV----EDV--ITTNIRSPEGLTFDWVNRVLYWTDSQMDT 67 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~---~d~~~~~~i~~~~~~g~-----~~----~~~--~~~~~~~p~gl~~d~~~~~ly~~d~~~~~ 67 (232)
+.+++|++.++.|++ +...++ .|..+++... .. ..+ ....-..+.++++.+..+.++.+-...+.
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGS-IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEE-EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred ccEEEEcCCCCEEEEEEeccCCCc-eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 458899998777776 333344 7877776532 10 111 11123567889998865667777777789
Q ss_pred EEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC-----CcceEEEeC
Q psy5751 68 ISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK-----LPNSLAVDF 142 (232)
Q Consensus 68 I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~-----~p~~l~~d~ 142 (232)
|...|+...............+..++.+|.+..|+.... .+.|...++.+.....+....... ...+++.++
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ---NGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET---TSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC---CCcEEEEccCCcccccccCCcccCCCCceeEEEEEEec
Confidence 999998766332222233457889999997666666553 456888888754333322111011 335667776
Q ss_pred CCCEEEEEECCCC------cEEEEecCCCc---eEEEec--C------CCceEEE--E-E-ECCEEEEEeCCCCcEEEEe
Q psy5751 143 RTDELCWVDADSK------SLECMTIRNRV---RRKVYS--N------CTYPFGL--S-I-TDEKYYWTDWKTNRIESAN 201 (232)
Q Consensus 143 ~~~~Ly~~d~~~~------~i~~~~~~g~~---~~~~~~--~------~~~p~gl--a-~-~~~~ly~td~~~~~i~~~~ 201 (232)
....+.......+ .+...++...+ ...+.. . ...+..+ . + +-+.+|++.+.+..|..+.
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILA 330 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEE
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEE
Confidence 5333322233322 25555665321 122211 1 2222222 2 2 3578999999999888888
Q ss_pred CCCC--Ccc--------eEEecc---CCcceeEEEEEEcC
Q psy5751 202 KEGE--RAP--------SIALDM---MGTTYMYGIAAVPS 228 (232)
Q Consensus 202 ~~g~--~~~--------~i~~~~---~~~~~p~gi~~~~~ 228 (232)
..++ ..+ ...+|. ..-+.|.|+++...
T Consensus 331 ~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d~~ 370 (434)
T 2oit_A 331 RQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYT 370 (434)
T ss_dssp ECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEECC
T ss_pred ecCCCCccEEEeccccccccccCCCCCCCceeeEEEEEcc
Confidence 7643 221 112221 12456889888653
No 254
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.054 Score=41.58 Aligned_cols=208 Identities=13% Similarity=0.114 Sum_probs=118.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC---CE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ---PK 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~ 79 (232)
.+++| +.++.|+.+. .++ .|...+++.......+......+..+++.+.++.|+.+. ..+.|...++.... ..
T Consensus 22 ~~~~~-~~~~~l~s~~-~dg-~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 22 RDVVA-VDDSKVASVS-RDG-TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp EEEEE-EETTEEEEEE-TTS-EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSCC-
T ss_pred EEEEe-cCCCEEEEEE-cCC-cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCCcc
Confidence 46777 5556655544 445 788888876654444444457889999999776666554 55788888765542 22
Q ss_pred EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC-CCCEEEEEECCCCcEE
Q psy5751 80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF-RTDELCWVDADSKSLE 158 (232)
Q Consensus 80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~-~~~~Ly~~d~~~~~i~ 158 (232)
..+.........++.+ .+.|+.+.. .+.|...+ .+..... .... ......+++.+ .+..| ++-...+.|.
T Consensus 98 ~~~~~~~~~i~~~~~~--~~~l~~~~~---d~~i~~~d-~~~~~~~-~~~~-~~~v~~~~~~~~~~~~l-~~~~~d~~i~ 168 (313)
T 3odt_A 98 YTLIGHQGNVCSLSFQ--DGVVISGSW---DKTAKVWK-EGSLVYN-LQAH-NASVWDAKVVSFSENKF-LTASADKTIK 168 (313)
T ss_dssp CEECCCSSCEEEEEEE--TTEEEEEET---TSEEEEEE-TTEEEEE-EECC-SSCEEEEEEEETTTTEE-EEEETTSCEE
T ss_pred cchhhcccCEEEEEec--CCEEEEEeC---CCCEEEEc-CCcEEEe-cccC-CCceeEEEEccCCCCEE-EEEECCCCEE
Confidence 2333344566777775 566665553 34577776 2222222 2221 44566788877 44454 4445567777
Q ss_pred EEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751 159 CMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 159 ~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
..+.. .....+.. .......+++. ++. +++-...+.|...+.. ++....+. ........+++.++
T Consensus 169 i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 169 LWQND-KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---GHESFVYCIKLLPN 236 (313)
T ss_dssp EEETT-EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTT
T ss_pred EEecC-ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh---cCCceEEEEEEecC
Confidence 77722 22233322 34445677774 666 5555566788888876 33333332 23334555655443
No 255
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.14 Score=46.41 Aligned_cols=192 Identities=10% Similarity=-0.021 Sum_probs=120.6
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI 81 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 81 (232)
+.+++|++....|..+. .++ .|..++..+...... ...-..+..+++.+ ++.|. +-...+.|...++........
T Consensus 20 V~~lafspdg~~lAsgs-~Dg-~I~lw~~~~~~~~~~-~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIAT-VTG-EVHIYGQQQVEVVIK-LEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp EEEEEEETTTTEEEEEE-TTS-EEEEECSTTCEEEEE-CSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCSEEEE
T ss_pred cEEEEECCCCCEEEEEe-CCC-EEEEEeCCCcEEEEE-cCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCcEEEE
Confidence 45899999666665544 445 788888776443222 22334678899998 66455 444568899999987654333
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE----------cCCCCCcceEEEeCCCCEEEEEE
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----------AADLKLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----------~~~~~~p~~l~~d~~~~~Ly~~d 151 (232)
+. .-.....++++|....|+.... .+.|...++++........ .........+++++.++.+..+-
T Consensus 95 ~~-~~~~V~~v~~sp~g~~l~sgs~---dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 95 VF-VPGKITSIDTDASLDWMLIGLQ---NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EE-CSSCEEEEECCTTCSEEEEEET---TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred Ec-CCCCEEEEEECCCCCEEEEEcC---CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 33 3346789999997777777664 4568888887664321111 11134567999999755555565
Q ss_pred CCCCcEEEEecCCCceEEEecC-------------------CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 152 ADSKSLECMTIRNRVRRKVYSN-------------------CTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 152 ~~~~~i~~~~~~g~~~~~~~~~-------------------~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
...+.| ..+++.......... .....++++. ++..+.+-...+.|...+..
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 667788 888886644322221 1235677774 45555665556777777765
No 256
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.14 E-value=0.08 Score=43.49 Aligned_cols=173 Identities=9% Similarity=-0.001 Sum_probs=110.5
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
.+.|+.+. .++ .|...++........+......+..+++++.++.|+ +-...+.|...++........+........
T Consensus 280 ~~~l~~~~-~d~-~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 280 GNIVVSGS-YDN-TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI-SASMDTTIRIWDLENGELMYTLQGHTALVG 356 (464)
T ss_dssp TTEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEe-CCC-eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCcEEEEEeCCCCcEE
Confidence 45555444 344 688888876554344444456788999998666665 555667899999876554444444555667
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEE-
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK- 169 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~- 169 (232)
.++++ .+.|+.+.. .+.|...++........... ......+++++++..|..+. .+.|...++..++...
T Consensus 357 ~~~~~--~~~l~s~s~---dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 357 LLRLS--DKFLVSAAA---DGSIRGWDANDYSRKFSYHH--TNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEC--SSEEEEEET---TSEEEEEETTTCCEEEEEEC--TTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEEES
T ss_pred EEEEc--CCEEEEEeC---CCcEEEEECCCCceeeeecC--CCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEEeh
Confidence 77777 456655553 45688888886654444433 44566778888866665554 6788888887654322
Q ss_pred E-ecCCCceEEEEEECCEEEEEeCCCC
Q psy5751 170 V-YSNCTYPFGLSITDEKYYWTDWKTN 195 (232)
Q Consensus 170 ~-~~~~~~p~gla~~~~~ly~td~~~~ 195 (232)
. .........+++.++.++.+-...+
T Consensus 428 ~~~~~~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 428 NILKDADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp CTTTTCSEEEEEEEETTEEEEEEEETT
T ss_pred hhccCCCcEEEEEecCCEEEEEEEeCC
Confidence 1 2234445677888888877755444
No 257
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.09 E-value=0.0058 Score=52.55 Aligned_cols=111 Identities=11% Similarity=0.057 Sum_probs=76.9
Q ss_pred CCCCccEEEEeecCCeEEEEeCC---------------------CCeEEEEeCCCCCC-------EEEEe----------
Q psy5751 42 NIRSPEGLTFDWVNRVLYWTDSQ---------------------MDTISMANLNDDQP-------KVIVS---------- 83 (232)
Q Consensus 42 ~~~~p~gl~~d~~~~~ly~~d~~---------------------~~~I~~~~~~g~~~-------~~~~~---------- 83 (232)
.+..|+++++++.++.+|++-+. .+.|+++..++... ..++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 46789999999989999999654 25799887654321 11111
Q ss_pred -----------CCCCCceEEEEeCCCCeEEEEEcCC----------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751 84 -----------KDLVNPRGIVVHPYYRKLFWSDWNR----------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 84 -----------~~~~~p~~iavd~~~~~ly~~d~~~----------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~ 142 (232)
..++.|..|++++ .|.||++.-+. .+..++...........++....-....|+++++
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 1367899999998 67788765331 2346677776656666665554345677999999
Q ss_pred CCCEEEEEECC
Q psy5751 143 RTDELCWVDAD 153 (232)
Q Consensus 143 ~~~~Ly~~d~~ 153 (232)
+.+.||+.-.+
T Consensus 541 Dg~tlfvniQH 551 (592)
T 3zwu_A 541 DQKTLFVGIQH 551 (592)
T ss_dssp TSSEEEEEEES
T ss_pred CCCEEEEEEEC
Confidence 99999988544
No 258
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.05 E-value=0.079 Score=41.85 Aligned_cols=196 Identities=13% Similarity=0.037 Sum_probs=115.0
Q ss_pred EEEEE-----eCCCCEEEEEEcCCCCcEEEEEcCCCc-------eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEE
Q psy5751 3 IGITV-----DCVEGQVYYSSVADKSSIKRAHLDGKN-------VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISM 70 (232)
Q Consensus 3 ~~i~~-----d~~~~~ly~~d~~~~~~i~~~~~~g~~-------~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~ 70 (232)
.+++| .+.++.++++-..++ .|...++.... ....+......+..+++.+.+..| ++-...+.|..
T Consensus 25 ~~~~~~~s~~~~~d~~~l~sgs~D~-~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~l 102 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSPVLISGSRDK-TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA-ISSSWDKTLRL 102 (343)
T ss_dssp EEEEECCCSSTTCCCCEEEEEETTS-CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE-EEEETTSEEEE
T ss_pred hheeeEEEeecCCCCCEEEEEcCCC-EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE-EEEcCCCcEEE
Confidence 35666 443555555555555 67777765321 112233334567889998855554 46666788999
Q ss_pred EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCC----
Q psy5751 71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTD---- 145 (232)
Q Consensus 71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~---- 145 (232)
.++........+.........++++|.+..|..+.. .+.|...++.+......... ........+++++...
T Consensus 103 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 179 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA---EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANK 179 (343)
T ss_dssp EETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET---TSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSC
T ss_pred EECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC---CCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccc
Confidence 998766554444456667889999996666655543 34577777764322221110 1123346777777531
Q ss_pred -----EEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 146 -----ELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 146 -----~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.++.+-...+.|...+.++.....+.........+++. ++.+..+-...+.|...+..
T Consensus 180 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 180 VQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred cCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 34445455677777775544333333344445677774 55555665566777777763
No 259
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.01 E-value=0.092 Score=42.06 Aligned_cols=196 Identities=10% Similarity=0.036 Sum_probs=113.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-EE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-VI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~ 81 (232)
..++|.+....|..+.......|...++........+.. -..+.+|++.+.++.|..+ .. +.+.+.+....... ..
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~-~~~V~~v~fspdg~~l~s~-s~-~~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET-RGEVKDLHFSTDGKVVAYI-TG-SSLEVISTVTGSCIARK 213 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSSEEEEE-CS-SCEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC-CCceEEEEEccCCceEEec-cc-eeEEEEEeccCcceeee
Confidence 367888877777766543322788889886554333333 3578999999866665544 33 34555554433322 22
Q ss_pred Ee-CCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEE---EcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 82 VS-KDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFL---KAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 82 ~~-~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~---~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
.. ........+++.|.+..+..+..... ...+...++......... ..........+++++++..|..+ ...+.
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg-s~D~~ 292 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA-SNDNS 292 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE-ETTSC
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE-cCCCE
Confidence 11 23334578889985555544433221 123444554433322211 11114456789999986555444 55678
Q ss_pred EEEEecCCCce-EEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 157 LECMTIRNRVR-RKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 157 i~~~~~~g~~~-~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
|...+....+. ..+.. ......+|++. ++.+..+-...+.|...+.
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 88888876544 33433 34446788884 6666777666777777764
No 260
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.99 E-value=0.15 Score=43.94 Aligned_cols=194 Identities=12% Similarity=0.025 Sum_probs=108.3
Q ss_pred EEEEEeCCCCEEEEEEcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 3 IGITVDCVEGQVYYSSVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
.+++|++..+.|..+..... ..|+..+. +... ..+......+..+++.+.+..++.+-...+.|...+........
T Consensus 107 ~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~-~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~ 184 (611)
T 1nr0_A 107 KDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSN-GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS 184 (611)
T ss_dssp EEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBC-BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE
T ss_pred EEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCc-ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee
Confidence 46778886666665554332 13443332 2221 11222335678889988666556676677888888876544444
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc------CCCCCcceEEEeCCCCEEEEEECCC
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA------ADLKLPNSLAVDFRTDELCWVDADS 154 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~------~~~~~p~~l~~d~~~~~Ly~~d~~~ 154 (232)
.+..+......++++|. +.++.+-.. .+.|...++........+.. .......++++++++..|. +-...
T Consensus 185 ~l~~H~~~V~~v~fspd-g~~las~s~--D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D 260 (611)
T 1nr0_A 185 TFGEHTKFVHSVRYNPD-GSLFASTGG--DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASAD 260 (611)
T ss_dssp EECCCSSCEEEEEECTT-SSEEEEEET--TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETT
T ss_pred eeccccCceEEEEECCC-CCEEEEEEC--CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeCC
Confidence 44455667889999985 544444332 35677777654443333211 1134567999999866554 44567
Q ss_pred CcEEEEecCCCce-EEEecC---CCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 155 KSLECMTIRNRVR-RKVYSN---CTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 155 ~~i~~~~~~g~~~-~~~~~~---~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
+.|...+++..+. ..+... .....++.+... ..++-...+.+...+..
T Consensus 261 ~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~i~~~~~~ 312 (611)
T 1nr0_A 261 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ-ALVSISANGFINFVNPE 312 (611)
T ss_dssp SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS-CEEEEETTCCEEEEETT
T ss_pred CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC-EEEEEeCCCcEEEEeCC
Confidence 7888888875543 222211 112334444333 33443445556666554
No 261
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.98 E-value=0.059 Score=47.60 Aligned_cols=138 Identities=10% Similarity=-0.025 Sum_probs=87.3
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-C----CccEEEEeecCCeEEEEeCC--------CCeEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-R----SPEGLTFDWVNRVLYWTDSQ--------MDTISM 70 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-~----~p~gl~~d~~~~~ly~~d~~--------~~~I~~ 70 (232)
++.|.+. +.+++++ ++ .|...++.+.....++.... . ...++++.+.++.|.++... .+.++.
T Consensus 21 ~~~w~~d-g~~~~~~--~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 21 SLRWISD-HEYLYKQ--EN-NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CEEECSS-SEEEEEE--TT-EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCC-CcEEEEc--CC-cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 5677774 4555555 55 89999998776555554321 1 22447888888887776532 156788
Q ss_pred EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----------------CC
Q psy5751 71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----------------LK 133 (232)
Q Consensus 71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----------------~~ 133 (232)
.++.+.....+. .........+.+|.++.|.++. ...|+..++++.....+..... +.
T Consensus 97 ~d~~~~~~~~l~-~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 97 YDLNKRQLITEE-RIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EETTTTEECCSS-CCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EECCCCcEEEcc-cCCCcceeeEECCCCCEEEEEE----CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 898876543332 2233457888999888787775 2458888887766544322110 12
Q ss_pred CcceEEEeCCCCEEEEE
Q psy5751 134 LPNSLAVDFRTDELCWV 150 (232)
Q Consensus 134 ~p~~l~~d~~~~~Ly~~ 150 (232)
...+++++|++.+|.++
T Consensus 172 ~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYA 188 (740)
T ss_dssp SSBCEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEE
Confidence 22458899998888776
No 262
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.94 E-value=0.096 Score=41.07 Aligned_cols=155 Identities=8% Similarity=-0.088 Sum_probs=97.7
Q ss_pred CCCCccEEEEeecC--CeEEEEeCCCCeEEEEeCCCCC--CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751 42 NIRSPEGLTFDWVN--RVLYWTDSQMDTISMANLNDDQ--PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117 (232)
Q Consensus 42 ~~~~p~gl~~d~~~--~~ly~~d~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~ 117 (232)
.-..+..+++.+.. +.+.++-...+.|...+++... ....+.........++++|....|+.+.. .+.|...+
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd 114 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---DKTAKMWD 114 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC---CCcEEEEE
Confidence 34678889999864 4555566667889999987532 22344445667889999986566665553 45688888
Q ss_pred CCCCCcEEEEEcCCCCCcceEEE--eCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCC
Q psy5751 118 LDGTDREIFLKAADLKLPNSLAV--DFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTN 195 (232)
Q Consensus 118 ~~g~~~~~~~~~~~~~~p~~l~~--d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~ 195 (232)
++.......... .....++++ ++. +.++++-...+.|...+++..+.............+......++.+... +
T Consensus 115 ~~~~~~~~~~~~--~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 190 (368)
T 3mmy_A 115 LSSNQAIQIAQH--DAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE-R 190 (368)
T ss_dssp TTTTEEEEEEEC--SSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG-G
T ss_pred cCCCCceeeccc--cCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC-C
Confidence 886654444332 456788998 665 5555555667888888887655433333333444555556665555443 4
Q ss_pred cEEEEeCC
Q psy5751 196 RIESANKE 203 (232)
Q Consensus 196 ~i~~~~~~ 203 (232)
.+...+..
T Consensus 191 ~i~~~~~~ 198 (368)
T 3mmy_A 191 GLIVYQLE 198 (368)
T ss_dssp CEEEEECS
T ss_pred cEEEEEec
Confidence 45555554
No 263
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.86 E-value=0.0068 Score=53.18 Aligned_cols=137 Identities=11% Similarity=0.018 Sum_probs=90.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC---CCccEEEEeecCCeEEEEeCC--------CCeEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI---RSPEGLTFDWVNRVLYWTDSQ--------MDTISMAN 72 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~---~~p~gl~~d~~~~~ly~~d~~--------~~~I~~~~ 72 (232)
++.|.+.. .+.++. .++ .|+.+++++.....++.... .....+++.+.++.|.++... .+.|++.+
T Consensus 20 ~~~~s~dg-~~~~~~-~d~-~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS-ADN-NIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSS-EEEEEC-TTS-CEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCC-eEEEEc-CCC-CEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 45677744 544443 455 89999999877655554221 137789999988888776541 36899999
Q ss_pred CCCCCC---EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----------------C
Q psy5751 73 LNDDQP---KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----------------L 132 (232)
Q Consensus 73 ~~g~~~---~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----------------~ 132 (232)
+++... ..+ ......++++|.++.|.++. ...|+..++++.....+..... +
T Consensus 97 ~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~----~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~ 168 (719)
T 1z68_A 97 LSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVY----QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML 168 (719)
T ss_dssp TTTTEECCSSCC----CSSBCCEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred CCCCccccceec----CcccccceECCCCCEEEEEE----CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence 887643 222 13467789999887887775 2469999887765544332110 0
Q ss_pred CCcceEEEeCCCCEEEEEE
Q psy5751 133 KLPNSLAVDFRTDELCWVD 151 (232)
Q Consensus 133 ~~p~~l~~d~~~~~Ly~~d 151 (232)
....++++++++.+|+++.
T Consensus 169 ~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 169 ATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp CSSCCEEECTTSSEEEEEE
T ss_pred cCcccEEECCCCCEEEEEE
Confidence 1225899999988888764
No 264
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.75 E-value=0.13 Score=39.90 Aligned_cols=197 Identities=9% Similarity=0.012 Sum_probs=118.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-----eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-----EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-----~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
..+++|++..+.++++--.++ .|...++..... ...+......+..+++.+.++.|+ +-...+.|...+....
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~-~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~-s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDK-TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTG 118 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTS-CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT
T ss_pred EEEEEEeCCCCCEEEEEcCCC-eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE-EEcccccceEEeeccc
Confidence 357899987666666655556 788877764321 122333346788899998666665 4445578888888776
Q ss_pred CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-CEEEEEECCCC
Q psy5751 77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-DELCWVDADSK 155 (232)
Q Consensus 77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-~~Ly~~d~~~~ 155 (232)
...................+....|+.... .+.+...+..+.................+++.+.. ..++++-...+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~---d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~ 195 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSR---DKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 195 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred ceeeeecCCCCceeEEEEeecCccceeecC---CCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC
Confidence 655555555556667777775565555543 34466666665544333322213345667777654 34555555667
Q ss_pred cEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 156 SLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
.|...++.......... ......++++. ++.++++-...+.|...+..
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence 78888887665433333 33344677774 45555555556677766665
No 265
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.73 E-value=0.18 Score=41.19 Aligned_cols=190 Identities=8% Similarity=0.069 Sum_probs=108.8
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
+++++ .+.|+.+. .++ .|...+++.......+......+..++++ ++.|+ +-...+.|...++........+.
T Consensus 164 ~~~~~--~~~l~s~~-~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~-s~s~dg~i~~wd~~~~~~~~~~~ 236 (445)
T 2ovr_B 164 SSQMR--DNIIISGS-TDR-TLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVV-SGSRDATLRVWDIETGQCLHVLM 236 (445)
T ss_dssp EEEEE--TTEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEE-EEETTSEEEEEESSSCCEEEEEE
T ss_pred EEEec--CCEEEEEe-CCC-eEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEE-EEeCCCEEEEEECCCCcEEEEEc
Confidence 45555 34444333 444 68888887554433333334456667665 45554 55556889999988766555555
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
........++.+ ++.|+.+.. .+.|...++........+... ......+++ ++..|+.+ ...+.|...+++
T Consensus 237 ~~~~~v~~~~~~--~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~ 307 (445)
T 2ovr_B 237 GHVAAVRCVQYD--GRRVVSGAY---DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSG-SLDTSIRVWDVE 307 (445)
T ss_dssp CCSSCEEEEEEC--SSCEEEEET---TSCEEEEEGGGTEEEEEECCC-SSCEEEEEE--CSSEEEEE-ETTSCEEEEETT
T ss_pred CCcccEEEEEEC--CCEEEEEcC---CCEEEEEECCCCcEeEEecCC-CCceEEEEE--CCCEEEEE-eCCCeEEEEECC
Confidence 455566677774 556655553 355777777654332222221 334456666 33455444 557788888887
Q ss_pred CCceEE-EecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751 164 NRVRRK-VYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSI 210 (232)
Q Consensus 164 g~~~~~-~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i 210 (232)
...... +.........+++.++.++... ..+.|...+.. +.....+
T Consensus 308 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 308 TGNCIHTLTGHQSLTSGMELKDNILVSGN-ADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp TCCEEEEECCCCSCEEEEEEETTEEEEEE-TTSCEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCcccEEEEEEeCCEEEEEe-CCCeEEEEECCCCcEEEEE
Confidence 655433 3233344556677766655544 45778888875 4433333
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.72 E-value=0.29 Score=43.44 Aligned_cols=191 Identities=12% Similarity=0.112 Sum_probs=114.4
Q ss_pred CCCEEEEEEcCCC---CcEEEEEc---CCC--ceeEEEeCC-------CCCccEEEEe-ecCCeEEEEeCCCC----eEE
Q psy5751 10 VEGQVYYSSVADK---SSIKRAHL---DGK--NVEDVITTN-------IRSPEGLTFD-WVNRVLYWTDSQMD----TIS 69 (232)
Q Consensus 10 ~~~~ly~~d~~~~---~~i~~~~~---~g~--~~~~~~~~~-------~~~p~gl~~d-~~~~~ly~~d~~~~----~I~ 69 (232)
.++++||+....+ +.+++... +|. ..+.++..+ .....+.++. +.++.|.|+....+ .|+
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~ 204 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIE 204 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEE
Confidence 3678888864433 35778876 554 444444321 1134567888 87877776654432 499
Q ss_pred EEeCCCC-CC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCC--CCcEEEEeCCCCCc--EEEEEcCCCCCcceEEEeC
Q psy5751 70 MANLNDD-QP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS--GPKIEWSNLDGTDR--EIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 70 ~~~~~g~-~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~--~~~I~~~~~~g~~~--~~~~~~~~~~~p~~l~~d~ 142 (232)
+.++++. .. ..+-. ...+++..|.++.||++..... ..+|++.++.+... ..+.....-..-.++.+++
T Consensus 205 v~dl~~g~~~l~~~~~~----~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 205 FKRISDPSQTIADKVSG----TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp EEETTCTTCCCCCCEEE----ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred EEECCCCCEeCCccccC----ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 9999887 41 11111 1235778887778888765321 24799999987642 3343332122345778999
Q ss_pred CCCEEEEEECC--CCcEEEEecCCC--ce--EEEecCCCce-EEEEE-ECCEEEEE-eC---CCCcEEEEeCCC
Q psy5751 143 RTDELCWVDAD--SKSLECMTIRNR--VR--RKVYSNCTYP-FGLSI-TDEKYYWT-DW---KTNRIESANKEG 204 (232)
Q Consensus 143 ~~~~Ly~~d~~--~~~i~~~~~~g~--~~--~~~~~~~~~p-~gla~-~~~~ly~t-d~---~~~~i~~~~~~g 204 (232)
++.+|+++... ...|+.+++++. .. +.+......+ ..+.+ .++.||+. +. .+.+|++++..+
T Consensus 281 Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 281 DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 98888887533 457999999865 23 3343332222 44552 37777766 33 345888888764
No 267
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.16 Score=40.05 Aligned_cols=155 Identities=8% Similarity=-0.042 Sum_probs=93.5
Q ss_pred EEEEEeC--CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 3 IGITVDC--VEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 3 ~~i~~d~--~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
.++++++ .++.|..+. .++ .|...++.......+... ....+..+++.+.+ .++.+-...+.|...|+......
T Consensus 129 ~~~~~~~~~~~~~l~s~s-~dg-~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 129 IYMYGHNEVNTEYFIWAD-NRG-TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp EEEECCC---CCEEEEEE-TTC-CEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSC
T ss_pred EEEEcCCCCCCCEEEEEe-CCC-cEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCC
Confidence 4677777 555554444 445 788889886554333322 22357889999854 45556667789999998876654
Q ss_pred -EEEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCc---ceEEEeCCCCEEEEEECC
Q psy5751 80 -VIVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLP---NSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 80 -~~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p---~~l~~d~~~~~Ly~~d~~ 153 (232)
..+.. +......++++|.+..|..+. . . .|...++........+.. ..-..+ ..+++++++..|..+...
T Consensus 206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~--~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~ 281 (343)
T 3lrv_A 206 SSRFPVDEEAKIKEVKFADNGYWMVVEC-D--Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNE 281 (343)
T ss_dssp CEECCCCTTSCEEEEEECTTSSEEEEEE-S--S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETT
T ss_pred ccEEeccCCCCEEEEEEeCCCCEEEEEe-C--C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCC
Confidence 34443 456778999998555555544 2 2 688888765532211110 000012 359999987777765554
Q ss_pred CCcEEEEecCC
Q psy5751 154 SKSLECMTIRN 164 (232)
Q Consensus 154 ~~~i~~~~~~g 164 (232)
.+.|...+++.
T Consensus 282 d~~i~v~~~~~ 292 (343)
T 3lrv_A 282 SNSLTIYKFDK 292 (343)
T ss_dssp TTEEEEEEECT
T ss_pred CCcEEEEEEcc
Confidence 66666666653
No 268
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.61 E-value=0.12 Score=41.33 Aligned_cols=154 Identities=9% Similarity=0.030 Sum_probs=84.9
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-eeEEEe-CCCCCccEEEEeecCCeEEEEeCCC-C--eEEEEeCCCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQM-D--TISMANLNDDQ 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~-~--~I~~~~~~g~~ 77 (232)
.+++|.+....|..+. .+ .+.++...... ...... ..-..+..+++.+.++.+..+.... . .+...+.....
T Consensus 180 ~~v~fspdg~~l~s~s--~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 180 KDLHFSTDGKVVAYIT--GS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp CEEEECTTSSEEEEEC--SS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred EEEEEccCCceEEecc--ce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 4688888666555443 33 56666655333 211111 1223467788888666665544332 2 34455544433
Q ss_pred CEE----EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 78 PKV----IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 78 ~~~----~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
... .+.........++++|.+..|..... .+.|...++........+....-....+++|+|++.+| .+-+.
T Consensus 257 ~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~---D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l-aS~S~ 332 (365)
T 4h5i_A 257 TSVLRSKQVTNRFKGITSMDVDMKGELAVLASN---DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV-ASVSA 332 (365)
T ss_dssp EEEEEEEEEESSCSCEEEEEECTTSCEEEEEET---TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE-EEEET
T ss_pred ecceeeeeecCCCCCeEeEEECCCCCceEEEcC---CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE-EEEeC
Confidence 211 22245556789999995555544443 35688888765432222222223457899999985555 55566
Q ss_pred CCcEEEEecC
Q psy5751 154 SKSLECMTIR 163 (232)
Q Consensus 154 ~~~i~~~~~~ 163 (232)
.+.|...++.
T Consensus 333 D~tvrvw~ip 342 (365)
T 4h5i_A 333 ANTIHIIKLP 342 (365)
T ss_dssp TSEEEEEECC
T ss_pred CCeEEEEEcC
Confidence 6766666664
No 269
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.18 Score=38.54 Aligned_cols=208 Identities=10% Similarity=0.042 Sum_probs=116.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN---VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
..+++|++..+.|+.+... + .|...++.... ....+......+..++++ ++.|+ +-...+.|...+ .+. .
T Consensus 62 v~~~~~~~~~~~l~~~~~d-g-~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~-~~~~d~~i~~~d-~~~-~ 134 (313)
T 3odt_A 62 LNSVCYDSEKELLLFGGKD-T-MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVI-SGSWDKTAKVWK-EGS-L 134 (313)
T ss_dssp EEEEEEETTTTEEEEEETT-S-CEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEE-EEETTSEEEEEE-TTE-E
T ss_pred EEEEEECCCCCEEEEecCC-C-eEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEE-EEeCCCCEEEEc-CCc-E
Confidence 3578899877766666543 4 57777776432 112222333556667774 55555 545567888888 222 2
Q ss_pred EEEEeCCCCCceEEEEeC-CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751 79 KVIVSKDLVNPRGIVVHP-YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL 157 (232)
Q Consensus 79 ~~~~~~~~~~p~~iavd~-~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i 157 (232)
...+.........++..+ ..+.|+.+.. .+.|...+.. ................+++++. +. +++-...+.|
T Consensus 135 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i 207 (313)
T 3odt_A 135 VYNLQAHNASVWDAKVVSFSENKFLTASA---DKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDD-GH-FISCSNDGLI 207 (313)
T ss_dssp EEEEECCSSCEEEEEEEETTTTEEEEEET---TSCEEEEETT--EEEEEECSSCSSCEEEEEEEET-TE-EEEEETTSEE
T ss_pred EEecccCCCceeEEEEccCCCCEEEEEEC---CCCEEEEecC--ceEEEEeccCcccEEEEEEcCC-Ce-EEEccCCCeE
Confidence 233334555677888877 4455544443 3457777622 1222222212456778999987 45 4455667889
Q ss_pred EEEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEc
Q psy5751 158 ECMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 158 ~~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
...+++..+.. .+.........+++. ++. +++-...+.|...+.. +.....+.. .......+++.+
T Consensus 208 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~ 276 (313)
T 3odt_A 208 KLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITL---PAISIWSVDCMS 276 (313)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEEC---SSSCEEEEEECT
T ss_pred EEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEec---cCceEEEEEEcc
Confidence 99998855443 333344556788885 444 4455556788888876 333333322 222445555443
No 270
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.37 E-value=0.067 Score=44.18 Aligned_cols=123 Identities=8% Similarity=-0.085 Sum_probs=78.1
Q ss_pred CCccEEEEeecCCeEEE---EeCCCCeEEEEeCCCC-----CC----EEEE--eCCCCCceEEEEeCCCCeEEEEEcCCC
Q psy5751 44 RSPEGLTFDWVNRVLYW---TDSQMDTISMANLNDD-----QP----KVIV--SKDLVNPRGIVVHPYYRKLFWSDWNRS 109 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~---~d~~~~~I~~~~~~g~-----~~----~~~~--~~~~~~p~~iavd~~~~~ly~~d~~~~ 109 (232)
..+..+++.+.++.|++ +....+.|...++... .. ..+. ..+.....+++.+|..+.++.+-..
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~-- 170 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA-- 170 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET--
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC--
Confidence 35788999988887876 5555678888886542 11 1111 1234567899999865666665433
Q ss_pred CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751 110 GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV 170 (232)
Q Consensus 110 ~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~ 170 (232)
.+.|...++........... .-....++++++++..|+.+. ..+.|...++++.....+
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TSCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEE
T ss_pred CCeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccc
Confidence 45677777765522211111 134678999999977776664 577898988885544444
No 271
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.32 Score=39.47 Aligned_cols=197 Identities=11% Similarity=-0.042 Sum_probs=111.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC----CCceeEEE-------e--C--CCCCccEEEEee-cCCeEEEEeCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD----GKNVEDVI-------T--T--NIRSPEGLTFDW-VNRVLYWTDSQM 65 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~----g~~~~~~~-------~--~--~~~~p~gl~~d~-~~~~ly~~d~~~ 65 (232)
..+++|.+..+.|+.+. .++ .|...+++ +....... . + ....+..++.-+ ..+.++++-...
T Consensus 114 v~~~~~~~~~~~l~s~s-~dg-~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 114 VTQITMIPNFDAFAVSS-KDG-QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp EEEEEECTTSSEEEEEE-TTS-EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT
T ss_pred EEEEEEeCCCCEEEEEe-CCC-EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC
Confidence 35788988666665554 344 67766663 32211110 0 0 111222333111 134455566667
Q ss_pred CeEEEEeCCCCCCEEEEeC--CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC
Q psy5751 66 DTISMANLNDDQPKVIVSK--DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR 143 (232)
Q Consensus 66 ~~I~~~~~~g~~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~ 143 (232)
+.|...++........+.. .......++++|....|+.+.. .+.|...++........+..........+++.+.
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT---RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET---TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC---CCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 8999999987665555543 4567889999986555555553 3568888877543222222111223456655542
Q ss_pred ---CCEEEEEECCCCcEEEEecCCCce-EEEecC--------------------------CCceEEEEEECCEEEEEeCC
Q psy5751 144 ---TDELCWVDADSKSLECMTIRNRVR-RKVYSN--------------------------CTYPFGLSITDEKYYWTDWK 193 (232)
Q Consensus 144 ---~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~--------------------------~~~p~gla~~~~~ly~td~~ 193 (232)
++.+.++-...+.|...+++.... ..+... ......+++.++.++++-..
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~ 348 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEA 348 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCC
Confidence 355666666677888888875543 222211 01134567777777777777
Q ss_pred CCcEEEEeCC
Q psy5751 194 TNRIESANKE 203 (232)
Q Consensus 194 ~~~i~~~~~~ 203 (232)
.+.|...+..
T Consensus 349 d~~i~~wd~~ 358 (437)
T 3gre_A 349 TSSIVMFSLN 358 (437)
T ss_dssp GTEEEEEETT
T ss_pred CCeEEEEECC
Confidence 7888888876
No 272
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.20 E-value=0.4 Score=39.22 Aligned_cols=192 Identities=9% Similarity=0.012 Sum_probs=113.1
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEee-cCCeEEEEeCCCCeEEEEeCCCCCCEE-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDW-VNRVLYWTDSQMDTISMANLNDDQPKV- 80 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~- 80 (232)
.+++|.+ ++. +++-..++ .|...+++.......+......+..+++.+ ..+.+.++-...+.|...++.......
T Consensus 166 ~~l~~~~-~~~-l~s~s~dg-~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~ 242 (464)
T 3v7d_B 166 WALKYAH-GGI-LVSGSTDR-TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD 242 (464)
T ss_dssp EEEEECS-TTE-EEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC--
T ss_pred EEEEEcC-CCE-EEEEeCCC-CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccc
Confidence 4677766 344 44444455 799999886554444444446777888875 244555566667889988887654221
Q ss_pred ----------------------EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceE
Q psy5751 81 ----------------------IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSL 138 (232)
Q Consensus 81 ----------------------~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l 138 (232)
...........+ .+....|+.... .+.|...++........+... ......+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~-~~~v~~~ 316 (464)
T 3v7d_B 243 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY---DNTLIVWDVAQMKCLYILSGH-TDRIYST 316 (464)
T ss_dssp ----CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCEEEE
T ss_pred ccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC---CCeEEEEECCCCcEEEEecCC-CCCEEEE
Confidence 122222333343 443566665553 356888888754433333322 4567789
Q ss_pred EEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCCCC
Q psy5751 139 AVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKEGE 205 (232)
Q Consensus 139 ~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~ 205 (232)
++++++..|+.+ ...+.|...+++.+....... .......+++.+..|+.+ ...+.|...+....
T Consensus 317 ~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~-s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 317 IYDHERKRCISA-SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSA-AADGSIRGWDANDY 382 (464)
T ss_dssp EEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEE-ETTSEEEEEETTTC
T ss_pred EEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEE-eCCCcEEEEECCCC
Confidence 999986666554 557788888887654433333 333445666665554444 44577777777643
No 273
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.07 E-value=0.3 Score=36.54 Aligned_cols=176 Identities=10% Similarity=-0.083 Sum_probs=103.7
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCc------e-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC------
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKN------V-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ------ 77 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~------~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~------ 77 (232)
+-.||..+-. +++........ + .++-..+......|++++ ++.||.. .++.+++.+.....
T Consensus 4 ~~~l~~v~~d---~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD---KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMG 77 (236)
T ss_dssp CCCEEEEETT---EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHH
T ss_pred ceEEEEEeCC---cEEecCCCCCcccchhhhccccCccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccc
Confidence 3445555543 46665554322 1 223333466888999999 8889988 55789999874311
Q ss_pred -CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC--CCCC-----cEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751 78 -PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL--DGTD-----REIFLKAADLKLPNSLAVDFRTDELCW 149 (232)
Q Consensus 78 -~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~--~g~~-----~~~~~~~~~~~~p~~l~~d~~~~~Ly~ 149 (232)
-..+-......-..+.+|+ +|.||... .++|+|.+. ++.. ...+.... -..-..|.++++ +.||-
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~-~G~LYav~----dG~iyr~~pP~~~~~~Wl~~a~~vg~~g-w~~~~~lff~p~-G~Lya 150 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDP-NGYLYAVS----KDKLYKASPPQSDTDNWIARATEVGSGG-WSGFKFLFFHPN-GYLYA 150 (236)
T ss_dssp HCEEEECSCGGGCSEEEECT-TSCEEEEE----TTEEEEESCCCSTTCCHHHHSEEEECSS-GGGEEEEEECTT-SCEEE
T ss_pred cccEecccccccceEEEECC-CCCEEEeC----CCEEEEeCCCcCCCCceeccccEeccCC-CCceEEEEECCC-ceEEE
Confidence 2233333444457899997 99999993 368999876 3222 12333322 223477888887 89998
Q ss_pred EECCCCcEEEEecC-CC------ceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 150 VDADSKSLECMTIR-NR------VRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 150 ~d~~~~~i~~~~~~-g~------~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+. .+++++.... +. ..+.+. ..-..-.-+.+. ++.||..+ ++++++..+.
T Consensus 151 v~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 151 VH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp EE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEEEESCC
T ss_pred Ee--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEEecCCc
Confidence 87 5556554333 21 122222 111111223443 77888888 6788888765
No 274
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.04 E-value=0.48 Score=38.60 Aligned_cols=181 Identities=11% Similarity=0.033 Sum_probs=106.0
Q ss_pred CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCc
Q psy5751 10 VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNP 89 (232)
Q Consensus 10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 89 (232)
.++.|..+. .++ .|...++........+......+..+++| ++ +.++-...+.|...++........+.......
T Consensus 142 d~~~l~~g~-~dg-~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v 216 (435)
T 1p22_A 142 DDQKIVSGL-RDN-TIKIWDKNTLECKRILTGHTGSVLCLQYD--ER-VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV 216 (435)
T ss_dssp CSSEEEEEE-SSS-CEEEEESSSCCEEEEECCCSSCEEEEECC--SS-EEEEEETTSCEEEEESSSCCEEEEECCCCSCE
T ss_pred CCCEEEEEe-CCC-eEEEEeCCCCeEEEEEcCCCCcEEEEEEC--CC-EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE
Confidence 345554444 445 68888887655444444444556666663 44 44565566889999988766554444455556
Q ss_pred eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE--EEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce
Q psy5751 90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF--LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR 167 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~--~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~ 167 (232)
..++.+ .+.|+.+.. .+.|...++........ ...........++++ +..|+.+ ...+.|...+++....
T Consensus 217 ~~l~~~--~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~-~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 217 LHLRFN--NGMMVTCSK---DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSA-SGDRTIKVWNTSTCEF 288 (435)
T ss_dssp EEEECC--TTEEEEEET---TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEE-ETTSEEEEEETTTCCE
T ss_pred EEEEEc--CCEEEEeeC---CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEE-eCCCeEEEEECCcCcE
Confidence 677776 456555553 35688888765543211 111113345667774 3555544 5577888888886544
Q ss_pred E-EEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751 168 R-KVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 168 ~-~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g 204 (232)
. .+.........+++.++.++... ..+.|...+...
T Consensus 289 ~~~~~~~~~~v~~~~~~~~~l~~g~-~dg~i~iwd~~~ 325 (435)
T 1p22_A 289 VRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIEC 325 (435)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEE-TTSCEEEEETTT
T ss_pred EEEEcCCCCcEEEEEeCCCEEEEEe-CCCeEEEEECCC
Confidence 3 33333344556666666555544 457788888763
No 275
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.97 E-value=0.41 Score=37.32 Aligned_cols=114 Identities=9% Similarity=0.054 Sum_probs=73.2
Q ss_pred eEEEEEeCCC--CEEEEEEcCCCCcEEEEEcCC--CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVE--GQVYYSSVADKSSIKRAHLDG--KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~--~~ly~~d~~~~~~i~~~~~~g--~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
..+++|++.. +.++++-..++ .|...+++. ......+......+..+++.+.++.|+ +-...+.|...++....
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~ 119 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWAN-DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKMWDLSSNQ 119 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTS-EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE
T ss_pred eEEEEEcCCCCCceEEEEECCCC-cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEEEEcCCCC
Confidence 3578999865 46655555556 788888874 333234444456788999998666666 44456889999998776
Q ss_pred CEEEEeCCCCCceEEEE--eCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751 78 PKVIVSKDLVNPRGIVV--HPYYRKLFWSDWNRSGPKIEWSNLDGT 121 (232)
Q Consensus 78 ~~~~~~~~~~~p~~iav--d~~~~~ly~~d~~~~~~~I~~~~~~g~ 121 (232)
...+.. .......+++ ++ ++.++++-.. .+.|...++...
T Consensus 120 ~~~~~~-~~~~v~~~~~~~~~-~~~~l~~~~~--dg~i~vwd~~~~ 161 (368)
T 3mmy_A 120 AIQIAQ-HDAPVKTIHWIKAP-NYSCVMTGSW--DKTLKFWDTRSS 161 (368)
T ss_dssp EEEEEE-CSSCEEEEEEEECS-SCEEEEEEET--TSEEEEECSSCS
T ss_pred ceeecc-ccCceEEEEEEeCC-CCCEEEEccC--CCcEEEEECCCC
Confidence 555443 4556788888 66 4544444322 355777776543
No 276
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.75 E-value=0.65 Score=37.85 Aligned_cols=184 Identities=8% Similarity=0.005 Sum_probs=109.8
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
.+.++ ++.|+.+. .++ .|...++........+......+..++++ ++.| ++-...+.|...++........+.
T Consensus 124 ~~~~~--g~~l~sg~-~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l-~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 124 CLQFC--GNRIVSGS-DDN-TLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNII-ISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp EEEEE--TTEEEEEE-TTS-CEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEc--CCEEEEEE-CCC-cEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEE-EEEeCCCeEEEEECCcCcEEEEEC
Confidence 34444 45555544 445 78888887555433343334566777776 4444 455566889999987765444444
Q ss_pred CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751 84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR 163 (232)
Q Consensus 84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~ 163 (232)
........++.+ .+.|+.... .+.|...++........+... ......++++ +..|+.+ ...+.|...+++
T Consensus 197 ~h~~~v~~~~~~--~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~-~~dg~i~iwd~~ 267 (445)
T 2ovr_B 197 GHTSTVRCMHLH--EKRVVSGSR---DATLRVWDIETGQCLHVLMGH-VAAVRCVQYD--GRRVVSG-AYDFMVKVWDPE 267 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEET---TSEEEEEESSSCCEEEEEECC-SSCEEEEEEC--SSCEEEE-ETTSCEEEEEGG
T ss_pred CCCCcEEEEEec--CCEEEEEeC---CCEEEEEECCCCcEEEEEcCC-cccEEEEEEC--CCEEEEE-cCCCEEEEEECC
Confidence 455566777777 566665553 456888888765544444332 4456677773 3455444 557788888887
Q ss_pred CCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751 164 NRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 164 g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g 204 (232)
......... .......+++++..++.+. ..+.|...+...
T Consensus 268 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~i~d~~~ 308 (445)
T 2ovr_B 268 TETCLHTLQGHTNRVYSLQFDGIHVVSGS-LDTSIRVWDVET 308 (445)
T ss_dssp GTEEEEEECCCSSCEEEEEECSSEEEEEE-TTSCEEEEETTT
T ss_pred CCcEeEEecCCCCceEEEEECCCEEEEEe-CCCeEEEEECCC
Confidence 654332222 3334556777555555544 457788888763
No 277
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.68 E-value=0.69 Score=37.63 Aligned_cols=183 Identities=8% Similarity=-0.006 Sum_probs=106.5
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE---E
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK---V 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~---~ 80 (232)
++++ .++.|+.+ ..++ .|...+++.......+......+..++++ .+.+ ++-...+.|...++...... .
T Consensus 178 ~l~~--~~~~l~sg-~~dg-~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~dg~i~vwd~~~~~~~~~~~ 250 (435)
T 1p22_A 178 CLQY--DERVIITG-SSDS-TVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMM-VTCSKDRSIAVWDMASPTDITLRR 250 (435)
T ss_dssp EEEC--CSSEEEEE-ETTS-CEEEEESSSCCEEEEECCCCSCEEEEECC--TTEE-EEEETTSCEEEEECSSSSCCEEEE
T ss_pred EEEE--CCCEEEEE-cCCC-eEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEE-EEeeCCCcEEEEeCCCCCCceeee
Confidence 4445 23444443 3445 68888887554433343333455666665 4544 45556688999998765533 2
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM 160 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~ 160 (232)
...........++.+ ++.|+.+.. .+.|...++........+... ......++++. +.| ++-...+.|...
T Consensus 251 ~~~~~~~~v~~~~~~--~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~--~~l-~~g~~dg~i~iw 321 (435)
T 1p22_A 251 VLVGHRAAVNVVDFD--DKYIVSASG---DRTIKVWNTSTCEFVRTLNGH-KRGIACLQYRD--RLV-VSGSSDNTIRLW 321 (435)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEEET--TEE-EEEETTSCEEEE
T ss_pred EecCCCCcEEEEEeC--CCEEEEEeC---CCeEEEEECCcCcEEEEEcCC-CCcEEEEEeCC--CEE-EEEeCCCeEEEE
Confidence 333444556677775 566666653 456888888766544444432 34556777752 444 444567789999
Q ss_pred ecCCCceE-EEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751 161 TIRNRVRR-KVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 161 ~~~g~~~~-~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~ 203 (232)
+++.+... .+........++++++..|+.. ...+.|...+..
T Consensus 322 d~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg-~~dg~i~vwd~~ 364 (435)
T 1p22_A 322 DIECGACLRVLEGHEELVRCIRFDNKRIVSG-AYDGKIKVWDLV 364 (435)
T ss_dssp ETTTCCEEEEECCCSSCEEEEECCSSEEEEE-ETTSCEEEEEHH
T ss_pred ECCCCCEEEEEeCCcCcEEEEEecCCEEEEE-eCCCcEEEEECC
Confidence 98865443 3332334455677755555444 445777777754
No 278
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.56 E-value=1.1 Score=39.22 Aligned_cols=191 Identities=10% Similarity=-0.013 Sum_probs=100.0
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
++.||++... + .|+.++..... ..+.-.... ....+++++ ++.||+... .++++.+|.......
T Consensus 77 ~g~vyv~~~~-~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~-dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 77 DGIMYVSASW-S-VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAW-DGRLIALDAATGKEV 151 (677)
T ss_dssp TTEEEEECGG-G-CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEE
T ss_pred CCEEEEECCC-C-eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEcC-CCEEEEEECCCCCEE
Confidence 5788887653 3 58888876332 222211110 122467776 678997753 478888888544332
Q ss_pred EEEeCC------CCCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcC-CC---------------CC
Q psy5751 80 VIVSKD------LVNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAA-DL---------------KL 134 (232)
Q Consensus 80 ~~~~~~------~~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~-~~---------------~~ 134 (232)
=-.... .......++. ++.+|+.....+ .+.|+.++.......--.... .. .+
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred eeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 222211 0111223344 688888764321 356777876544332222211 00 01
Q ss_pred c---------------ceEEEeCCCCEEEEEECCC------------------CcEEEEecCCCceEEEecC--------
Q psy5751 135 P---------------NSLAVDFRTDELCWVDADS------------------KSLECMTIRNRVRRKVYSN-------- 173 (232)
Q Consensus 135 p---------------~~l~~d~~~~~Ly~~d~~~------------------~~i~~~~~~g~~~~~~~~~-------- 173 (232)
+ ..+++|+..+.||+..... +.|..++.+.++..--.+.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence 1 3589999999999885431 2599999986655433221
Q ss_pred --CCceEEEEE-ECC---EEEEEeCCCCcEEEEeCC-CCCcc
Q psy5751 174 --CTYPFGLSI-TDE---KYYWTDWKTNRIESANKE-GERAP 208 (232)
Q Consensus 174 --~~~p~gla~-~~~---~ly~td~~~~~i~~~~~~-g~~~~ 208 (232)
...|.-+.. .++ .+++.-..++.++.++.. |+.+.
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~ 351 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFIS 351 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEec
Confidence 122332222 133 334444445667777765 44433
No 279
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.51 E-value=1.1 Score=40.76 Aligned_cols=155 Identities=8% Similarity=-0.072 Sum_probs=95.0
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI- 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~- 81 (232)
.+++|.+ ++.|.-+. .++ .|...+++.......+.. -..+..+++++.++.|+... ..+.|...++++......
T Consensus 62 ~~l~fsp-g~~L~S~s-~D~-~v~lWd~~~~~~~~~~~~-~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 62 KEMRFVK-GIYLVVIN-AKD-TVYVLSLYSQKVLTTVFV-PGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp EEEEEET-TTEEEEEE-TTC-EEEEEETTTCSEEEEEEC-SSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred EEEEEcC-CCEEEEEE-CcC-eEEEEECCCCcEEEEEcC-CCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccce
Confidence 5788888 55454443 445 799999876543223332 25678899998777777555 457899999887653211
Q ss_pred E----------eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-----------------CCCC
Q psy5751 82 V----------SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-----------------DLKL 134 (232)
Q Consensus 82 ~----------~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-----------------~~~~ 134 (232)
. ........+++++|.++.++.+... .+.| ..++........+... .-..
T Consensus 137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~--dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE--YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS--SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred eccccccccccccCCCCeEEEEEccCCCCEEEEEeC--CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence 1 1233466899999854444444332 4567 7777655332222210 0134
Q ss_pred cceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751 135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRV 166 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~ 166 (232)
...+++++++..| .+-...+.|...+++.++
T Consensus 214 V~~v~fspdg~~l-asgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 214 VIQSLYHPNSLHI-ITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEEECTTSSEE-EEEETTCCEEEEETTTCC
T ss_pred eEEEEEcCCCCEE-EEEECCCeEEEEECCCCc
Confidence 6789999985444 555667788888887544
No 280
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.47 E-value=0.49 Score=40.71 Aligned_cols=106 Identities=23% Similarity=0.256 Sum_probs=71.7
Q ss_pred eEEEEEeCCCCEEEEEEcCCC--------------------CcEEEEEcCCCc------eeEEEe---------------
Q psy5751 2 LIGITVDCVEGQVYYSSVADK--------------------SSIKRAHLDGKN------VEDVIT--------------- 40 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~--------------------~~i~~~~~~g~~------~~~~~~--------------- 40 (232)
|+++.+++.++.+|++-..+. +.|+++..++.. ...++.
T Consensus 386 pEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~~~ 465 (592)
T 3zwu_A 386 PEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKGG 465 (592)
T ss_dssp EEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGGC
T ss_pred cceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccccc
Confidence 689999999999999965321 368888765421 111211
Q ss_pred -------CCCCCccEEEEeecCCeEEEE-eCC-----------CCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCe
Q psy5751 41 -------TNIRSPEGLTFDWVNRVLYWT-DSQ-----------MDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRK 100 (232)
Q Consensus 41 -------~~~~~p~gl~~d~~~~~ly~~-d~~-----------~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ 100 (232)
..+..|-+|++|+.+ +||++ |.. ++.++..+........++. .......|+++.|..+.
T Consensus 466 ~~~~~~~~~f~~PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~t 544 (592)
T 3zwu_A 466 SSNITPQNMFNSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKT 544 (592)
T ss_dssp CTTCCTTTCCCCEEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSE
T ss_pred ccccCCCCCccCCcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCE
Confidence 125689999999955 56665 432 3567777776555544444 45567889999998899
Q ss_pred EEEEEcCC
Q psy5751 101 LFWSDWNR 108 (232)
Q Consensus 101 ly~~d~~~ 108 (232)
||+.-+..
T Consensus 545 lfvniQHP 552 (592)
T 3zwu_A 545 LFVGIQHP 552 (592)
T ss_dssp EEEEEEST
T ss_pred EEEEEECC
Confidence 99987653
No 281
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.7 Score=36.24 Aligned_cols=154 Identities=12% Similarity=0.051 Sum_probs=90.1
Q ss_pred CCccEEEEee--cCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751 44 RSPEGLTFDW--VNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120 (232)
Q Consensus 44 ~~p~gl~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g 120 (232)
..+..+++.+ .++. +++-...+.|...++.......+.. ........++++| ++.++.+-.. .+.|...++..
T Consensus 126 ~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~--dg~i~iwd~~~ 201 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSP--DGILDVYNLSS 201 (343)
T ss_dssp SCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECT--TSCEEEEESSC
T ss_pred CCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcC--CCEEEEEECCC
Confidence 4577888887 5554 4455566889999988766544443 2333578999998 5555555332 45688888876
Q ss_pred CCcE-EEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC---CCce---EEEEEE-CC-EEEEEe
Q psy5751 121 TDRE-IFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN---CTYP---FGLSIT-DE-KYYWTD 191 (232)
Q Consensus 121 ~~~~-~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~---~~~p---~gla~~-~~-~ly~td 191 (232)
.... ..+..........+++++.+..|..+. .+.|...+++.......... -..+ ..+++. .+ .|..+.
T Consensus 202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 6543 222221145678999999877777766 33888888876533111111 0111 347775 34 444433
Q ss_pred CCCCcEEEEeCC
Q psy5751 192 WKTNRIESANKE 203 (232)
Q Consensus 192 ~~~~~i~~~~~~ 203 (232)
...+.+...+..
T Consensus 280 ~~d~~i~v~~~~ 291 (343)
T 3lrv_A 280 NESNSLTIYKFD 291 (343)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCcEEEEEEc
Confidence 425555555543
No 282
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.42 E-value=1 Score=39.74 Aligned_cols=184 Identities=10% Similarity=0.021 Sum_probs=99.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCC------Ccee--EEEe--CCC--CCccEEEEeecCCeEEEEeCCCCeEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDG------KNVE--DVIT--TNI--RSPEGLTFDWVNRVLYWTDSQMDTISMA 71 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g------~~~~--~~~~--~~~--~~p~gl~~d~~~~~ly~~d~~~~~I~~~ 71 (232)
++..|. ++.||++-... .|++++.+. .... .... .++ ..+..|..|. .+.||+.....+.|.++
T Consensus 423 ~i~~d~-~g~lWigT~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~ 498 (758)
T 3ott_A 423 YIFEDT-AGQLWISTCLG--GIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKI 498 (758)
T ss_dssp EEEECT-TSEEEEEESSS--CEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEE
T ss_pred EEEEcC-CCCEEEEECCC--ceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCCCcEEE
Confidence 444554 56776655433 377776542 1110 1111 112 2467788886 56677633333568888
Q ss_pred eCCCCCCEEEEeCC---CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEE
Q psy5751 72 NLNDDQPKVIVSKD---LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDEL 147 (232)
Q Consensus 72 ~~~g~~~~~~~~~~---~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~L 147 (232)
+........+.... ...+.++..|. +|.||++..+ -+.+.+......+...... ......++..+ .+.|
T Consensus 499 d~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~--~g~l 571 (758)
T 3ott_A 499 NPRTREVTKLFADELTGEKSPNYLLCDE-DGLLWVGFHG----GVMRINPKDESQQSISFGSFSNNEILSMTCV--KNSI 571 (758)
T ss_dssp ETTTTEEEEECTTTSCGGGCEEEEEECT-TSCEEEEETT----EEEEECC--CCCCBCCCCC---CCEEEEEEE--TTEE
T ss_pred eCCCCceEEecCCCcCCCcccceEEECC-CCCEEEEecC----ceEEEecCCCceEEecccCCCccceEEEEEC--CCCE
Confidence 88654433332211 13567888885 8899887643 2788776554333221111 01234566554 5899
Q ss_pred EEEECCCCcEEEEecCCCceEEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751 148 CWVDADSKSLECMTIRNRVRRKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 148 y~~d~~~~~i~~~~~~g~~~~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~ 203 (232)
|++- ..-+.++++.....+... .... -.+.++. +|.||+.- .+-+.+++|.
T Consensus 572 Wi~t--~~Gl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~l~fG~--~~Gl~~f~p~ 625 (758)
T 3ott_A 572 WVST--TNGLWIIDRKTMDARQQNMTNKR-FTSLLFDPKEDCVYLGG--ADGFGISHSN 625 (758)
T ss_dssp EEEE--SSCEEEEETTTCCEEEC--CCCC-CSEEEEETTTTEEEEEC--BSEEEEEEC-
T ss_pred EEEC--CCCeEEEcCCCceeEEecCCCCc-eeeeEEECCCCcEEEec--CCceEEEChh
Confidence 8886 345899988865544321 1111 1133333 78899864 4568888886
No 283
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.38 E-value=1.1 Score=38.26 Aligned_cols=194 Identities=10% Similarity=-0.007 Sum_probs=102.4
Q ss_pred CCEEEEEEcCCCCcEEEEEc--CCCceeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHL--DGKNVEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~--~g~~~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
++.||++...++ .|+.++. +|....+.-.... ....+++++ ++.||+... .+.++.+|......
T Consensus 62 ~g~vyv~~~~~~-~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPN-NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQA-NGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTT-CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCC-EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEeC-CCEEEEEECCCCCE
Confidence 678888875345 6888887 4544333321110 012356776 678987754 46888888754432
Q ss_pred EEEEe-CCC----CCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcC-CC----CCc----------
Q psy5751 79 KVIVS-KDL----VNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAA-DL----KLP---------- 135 (232)
Q Consensus 79 ~~~~~-~~~----~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~-~~----~~p---------- 135 (232)
.=... ... .-....++. ++.+|+.....+ .+.|+.++.......--.... .. ..|
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 21111 110 011122344 678888764311 456888887644332222211 00 000
Q ss_pred ----------------------ceEEEeCCCCEEEEEECC---------------CCcEEEEecCCCceEEEecC-----
Q psy5751 136 ----------------------NSLAVDFRTDELCWVDAD---------------SKSLECMTIRNRVRRKVYSN----- 173 (232)
Q Consensus 136 ----------------------~~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g~~~~~~~~~----- 173 (232)
..+++|+..+.+|+.... .+.|..++.+.++..--.+.
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence 247899988999998642 13699999987655433221
Q ss_pred -----CCceEEEEE-ECC---EEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751 174 -----CTYPFGLSI-TDE---KYYWTDWKTNRIESANKE-GERAPSI 210 (232)
Q Consensus 174 -----~~~p~gla~-~~~---~ly~td~~~~~i~~~~~~-g~~~~~i 210 (232)
...|.-+.. .++ ++++.-..++.++.+++. |+.+..+
T Consensus 296 ~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 296 WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 123332222 134 344444445677777765 4444333
No 284
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.29 E-value=1.2 Score=38.07 Aligned_cols=98 Identities=9% Similarity=-0.035 Sum_probs=56.0
Q ss_pred eEEEEeCCCCeEEEEEcC----------------------------------CCCCcEEEEeCCCCCcEEEEEcCCCCCc
Q psy5751 90 RGIVVHPYYRKLFWSDWN----------------------------------RSGPKIEWSNLDGTDREIFLKAADLKLP 135 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~----------------------------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p 135 (232)
.++++||.++.+|+.... ...+.++.+++......--.... ..+
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~--~~~ 466 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK--FAA 466 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES--SCC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC--CCc
Confidence 458899999999987531 11346777776544332222221 122
Q ss_pred ceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec----CCCceEEEEE-ECCEEEEEeC
Q psy5751 136 NSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS----NCTYPFGLSI-TDEKYYWTDW 192 (232)
Q Consensus 136 ~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----~~~~p~gla~-~~~~ly~td~ 192 (232)
.+..+...++.+|+. ...+.+..++.+.++..--.. ....|. .+ .++++|++..
T Consensus 467 ~~~~~~t~gg~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~--~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 467 WGGTLYTKGGLVWYA-TLDGYLKALDNKDGKELWNFKMPSGGIGSPM--TYSFKGKQYIGSM 525 (571)
T ss_dssp CSBCEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEE
T ss_pred cceeEEECCCEEEEE-cCCCeEEEEECCCCCEEEEEeCCCCcEeeeE--EEEECCEEEEEEE
Confidence 333444445888886 457889999987655432222 122333 33 5788888744
No 285
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.08 E-value=1.6 Score=38.22 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=35.4
Q ss_pred CcEEEEecCCCceEEEecCCCceEE--EEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751 155 KSLECMTIRNRVRRKVYSNCTYPFG--LSITDEKYYWTDWKTNRIESANKE-GERAPSIALDM 214 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~~~~~p~g--la~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~ 214 (232)
+.|..+|+..++..--........+ ++..++.+|+. ...+.+..++.. |+.+..+..+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSS
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCC
Confidence 5688888876554322221111222 33457788887 456888889876 66666666543
No 286
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.43 E-value=2.1 Score=36.75 Aligned_cols=146 Identities=5% Similarity=-0.025 Sum_probs=92.8
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEe----CCCCCccEEEEeecCCeEEEEeCCCCeEEE
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVIT----TNIRSPEGLTFDWVNRVLYWTDSQMDTISM 70 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~----~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~ 70 (232)
..+++|++.++.|+.+... + .|...++++... -..+. .....+..+++.+.+ +.+-...+.+..
T Consensus 132 v~svafSPDG~~LAsgs~D-G-tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrl 206 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED-G-ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFS 206 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-S-EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-C-EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEE
Confidence 4589999988888877654 4 688888887542 12222 123578888888744 456566788999
Q ss_pred EeCCCCCCE----EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE--eCCC
Q psy5751 71 ANLNDDQPK----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAV--DFRT 144 (232)
Q Consensus 71 ~~~~g~~~~----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~--d~~~ 144 (232)
.++++.... .+-..+.....+++.. ++.|-.+. .+.|...+..+.......... ....+++++ ++++
T Consensus 207 Wd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~----~~tIkLWd~~~~~~~~~~~gh-~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 207 MTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC----PGYVHKIDLKNYSISSLKTGS-LENFHIIPLNHEKES 279 (588)
T ss_dssp ECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC----SSEEEEEETTTTEEEEEECSC-CSCCCEEEETTCSSC
T ss_pred EECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe----CCeEEEEECCCCeEEEEEcCC-CceEEEEEeeeCCCC
Confidence 999887743 2322334567888887 45554443 257999998887665555332 566788999 7764
Q ss_pred CEEEEEECCCC-cEEEE
Q psy5751 145 DELCWVDADSK-SLECM 160 (232)
Q Consensus 145 ~~Ly~~d~~~~-~i~~~ 160 (232)
..|-.+. .++ ++|..
T Consensus 280 ~~La~a~-edG~klw~~ 295 (588)
T 2j04_A 280 TILLMSN-KTSYKVLLE 295 (588)
T ss_dssp EEEEECS-SCEEEEEES
T ss_pred CEEEEEc-CCCCEEEee
Confidence 3443333 233 35553
No 287
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.40 E-value=1.3 Score=33.96 Aligned_cols=197 Identities=9% Similarity=0.039 Sum_probs=112.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCC--
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQ-- 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~-- 77 (232)
.+++|++..+.|.-+. .++ .|...++++.. ....+...-..+.++++.+. .+.+..+-...+.|...++....
T Consensus 13 ~~~~~s~~g~~las~s-~D~-~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCS-SDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp EEEEECTTSSEEEEEE-TTS-CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred EEEEECCCCCEEEEEe-CCC-EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence 4788998666655444 445 68888887432 22233333456677887542 24455566677889999987643
Q ss_pred CEEEEeCCCCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCC-c-EEEEEcCCCCCcceEEEeCCC----------
Q psy5751 78 PKVIVSKDLVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTD-R-EIFLKAADLKLPNSLAVDFRT---------- 144 (232)
Q Consensus 78 ~~~~~~~~~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~-~-~~~~~~~~~~~p~~l~~d~~~---------- 144 (232)
....+.........+++.|.. +.++.+-.. .+.|...++.... . ...+... ....+.+++++..
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~--d~~v~~wd~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~ 167 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASS--DGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHNGT 167 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEEEEBCSSSCBCCEEEECC-SSCEEEEEECCCC----------
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEEC--CCcEEEEEecCCCceeeeeeecc-cCccceEeecCCcccccccCCCC
Confidence 222333344567889998752 444444322 3567777765442 1 1222221 3455678887752
Q ss_pred --CEEEEEECCCCcEEEEecCCCce-----EEEecCCCceEEEEEEC----CEEEEEeCCCCcEEEEeCCC
Q psy5751 145 --DELCWVDADSKSLECMTIRNRVR-----RKVYSNCTYPFGLSITD----EKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 145 --~~Ly~~d~~~~~i~~~~~~g~~~-----~~~~~~~~~p~gla~~~----~~ly~td~~~~~i~~~~~~g 204 (232)
++++.+-...+.|...+++.... ..+........++++.. +.++.+-...+.|...+...
T Consensus 168 ~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp --CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred CCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 34555555667777777764431 12222334456788752 36666666667777777654
No 288
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.31 E-value=1.6 Score=34.66 Aligned_cols=177 Identities=10% Similarity=0.063 Sum_probs=96.5
Q ss_pred CCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCC---
Q psy5751 11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDL--- 86 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--- 86 (232)
++.||+.... + .|+.++.+ |....+.-... ......+++ ++.||+.. ..+.|+.+|.......-......
T Consensus 103 ~~~v~v~~~~-g-~l~a~d~~tG~~~W~~~~~~-~~~~~p~~~--~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 103 GGHVYIGSEK-A-QVYALNTSDGTVAWQTKVAG-EALSRPVVS--DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp TTEEEEEETT-S-EEEEEETTTCCEEEEEECSS-CCCSCCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC---
T ss_pred CCEEEEEcCC-C-EEEEEECCCCCEEEEEeCCC-ceEcCCEEE--CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCce
Confidence 5677776543 3 68888876 44332332221 111222344 56777654 44678888874433221111110
Q ss_pred --CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCc-------------ceEEEeCCCCEEEEEE
Q psy5751 87 --VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLP-------------NSLAVDFRTDELCWVD 151 (232)
Q Consensus 87 --~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p-------------~~l~~d~~~~~Ly~~d 151 (232)
......+++ ++.+|+... .+.++.++.......-.... ..| ....++ ++.+|+..
T Consensus 177 ~~~~~~~~~~~--~~~v~~g~~---~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~ 246 (376)
T 3q7m_A 177 SLRGESAPTTA--FGAAVVGGD---NGRVSAVLMEQGQMIWQQRI---SQATGSTEIDRLSDVDTTPVVV--NGVVFALA 246 (376)
T ss_dssp --CCCCCCEEE--TTEEEECCT---TTEEEEEETTTCCEEEEEEC---CC-----------CCCCCCEEE--TTEEEEEC
T ss_pred eecCCCCcEEE--CCEEEEEcC---CCEEEEEECCCCcEEEEEec---ccCCCCcccccccccCCCcEEE--CCEEEEEe
Confidence 011234455 677777542 35677777754333222211 111 111223 47888874
Q ss_pred CCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCC
Q psy5751 152 ADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GER 206 (232)
Q Consensus 152 ~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~ 206 (232)
..+.+.+++...++.. .......+.+++++++.||++... +.+..+++. |+.
T Consensus 247 -~~g~l~~~d~~tG~~~-w~~~~~~~~~~~~~~~~l~~~~~~-g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 247 -YNGNLTALDLRSGQIM-WKRELGSVNDFIVDGNRIYLVDQN-DRVMALTIDGGVT 299 (376)
T ss_dssp -TTSCEEEEETTTCCEE-EEECCCCEEEEEEETTEEEEEETT-CCEEEEETTTCCE
T ss_pred -cCcEEEEEECCCCcEE-eeccCCCCCCceEECCEEEEEcCC-CeEEEEECCCCcE
Confidence 4678999998755443 222344566778889999999864 678999986 443
No 289
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.26 E-value=1.6 Score=34.59 Aligned_cols=136 Identities=13% Similarity=0.091 Sum_probs=81.4
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCC
Q psy5751 55 NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKL 134 (232)
Q Consensus 55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~ 134 (232)
++.||+... .+.++.++....... .......+.+++++ ++.||+.... +.++.++.......-.........
T Consensus 239 ~~~v~~~~~-~g~l~~~d~~tG~~~--w~~~~~~~~~~~~~--~~~l~~~~~~---g~l~~~d~~tG~~~w~~~~~~~~~ 310 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDLRSGQIM--WKRELGSVNDFIVD--GNRIYLVDQN---DRVMALTIDGGVTLWTQSDLLHRL 310 (376)
T ss_dssp TTEEEEECT-TSCEEEEETTTCCEE--EEECCCCEEEEEEE--TTEEEEEETT---CCEEEEETTTCCEEEEECTTTTSC
T ss_pred CCEEEEEec-CcEEEEEECCCCcEE--eeccCCCCCCceEE--CCEEEEEcCC---CeEEEEECCCCcEEEeecccCCCc
Confidence 578887754 468898988544322 23234456778887 8999999853 468999886554332222110122
Q ss_pred cceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC--CCceEEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751 135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--CTYPFGLSITDEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~--~~~p~gla~~~~~ly~td~~~~~i~~~~~ 202 (232)
.....+. ++.||+.+. .+.+.+++.+.++....... .......++.++.||+.... +.|+.+++
T Consensus 311 ~~~~~~~--~~~l~v~~~-~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~-G~l~~~~~ 376 (376)
T 3q7m_A 311 LTSPVLY--NGNLVVGDS-EGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKD-GTVYSITR 376 (376)
T ss_dssp CCCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTT-SCEEEEEC
T ss_pred ccCCEEE--CCEEEEEeC-CCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCC-CEEEEEeC
Confidence 2334444 478988854 67899999876544322221 11122334578999998764 66777653
No 290
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.16 E-value=2.7 Score=36.72 Aligned_cols=77 Identities=12% Similarity=-0.034 Sum_probs=48.5
Q ss_pred ceEEEeCCCCEEEEEEC-----------------------------------CCCcEEEEecCCCceEEEecCCCceE--
Q psy5751 136 NSLAVDFRTDELCWVDA-----------------------------------DSKSLECMTIRNRVRRKVYSNCTYPF-- 178 (232)
Q Consensus 136 ~~l~~d~~~~~Ly~~d~-----------------------------------~~~~i~~~~~~g~~~~~~~~~~~~p~-- 178 (232)
.++++|+..+.+|+... ..+.|..+|+..++..--........
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~ 463 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGG 463 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCc
Confidence 35899999999998421 11568888887665432222111122
Q ss_pred EEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEec
Q psy5751 179 GLSITDEKYYWTDWKTNRIESANKE-GERAPSIALD 213 (232)
Q Consensus 179 gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~ 213 (232)
.++..++.||+.. ..+.+..++.. |+.+..+..+
T Consensus 464 ~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 464 TLSTAGNLVFQGT-AAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEECS
T ss_pred eeEeCCCEEEEEC-CcccchhhhhhcChhheEecCC
Confidence 3445688888884 46788999876 6666666554
No 291
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.92 E-value=2.6 Score=35.65 Aligned_cols=194 Identities=6% Similarity=-0.103 Sum_probs=105.8
Q ss_pred EEEEEeCC-----CCEEEEEEcCCCCcEEEEEcCCCcee-----------EEEeCCCCCccEEEEeecCCeEEEEeCCCC
Q psy5751 3 IGITVDCV-----EGQVYYSSVADKSSIKRAHLDGKNVE-----------DVITTNIRSPEGLTFDWVNRVLYWTDSQMD 66 (232)
Q Consensus 3 ~~i~~d~~-----~~~ly~~d~~~~~~i~~~~~~g~~~~-----------~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~ 66 (232)
.+++|.+. ++.+..+-..++ .|...+++..... ..+...-..+.++++.+ .+.| .+-...+
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~Dg-tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~l-asgs~Dg 287 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEG-TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTV-VCGFKNG 287 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTS-CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEE-EEEETTS
T ss_pred EEEEECCCCCCCCCCceEEEEecCC-eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CCeE-EEEeCCC
Confidence 46778774 134444444455 7888887643210 12222224566677764 3444 4666778
Q ss_pred eEEEEeCCCC-CCEEEEeCCCCCceEEE-EeCCCC-eEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeC
Q psy5751 67 TISMANLNDD-QPKVIVSKDLVNPRGIV-VHPYYR-KLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDF 142 (232)
Q Consensus 67 ~I~~~~~~g~-~~~~~~~~~~~~p~~ia-vd~~~~-~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~ 142 (232)
.|...|+... .+...+........+++ ..+..+ .++.+-.. .+.|...++.... ...+...........+++++
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~--D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV--DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET--TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc--CCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 9999999754 33344444555677884 233355 66665543 4567777765432 22222221012356899999
Q ss_pred CCCEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 143 RTDELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 143 ~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
+... +.+-...+.|...++..... ..+........+|++. .+.++.+-...+.|...+.
T Consensus 366 ~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 366 QIYS-YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp TTTE-EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CcCe-EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 7444 55655666788878775443 4444444455666663 3444444444455544443
No 292
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.89 E-value=1.8 Score=33.89 Aligned_cols=151 Identities=11% Similarity=0.078 Sum_probs=88.6
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK- 79 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~- 79 (232)
.+++|++..+.|..+... + .|...+++....+ ..+......+.++++.+.++.| .+-...+.|...+++.....
T Consensus 65 ~~~~~sp~g~~l~s~s~D-~-~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~ 141 (345)
T 3fm0_A 65 RKVAWSPCGNYLASASFD-A-TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL-ATCSRDKSVWVWEVDEEDEYE 141 (345)
T ss_dssp EEEEECTTSSEEEEEETT-S-CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECTTSCEE
T ss_pred EEEEECCCCCEEEEEECC-C-cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE-EEEECCCeEEEEECCCCCCeE
Confidence 478898866666655543 3 5666666654322 2233334577899998865555 45556678998888765432
Q ss_pred --EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 80 --VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 80 --~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
..+.........++.+|....|..+... +.|...++......... .........++++++++..|..+. ..+.
T Consensus 142 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s-~D~~ 217 (345)
T 3fm0_A 142 CVSVLNSHTQDVKHVVWHPSQELLASASYD---DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS-DDRT 217 (345)
T ss_dssp EEEEECCCCSCEEEEEECSSSSCEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSC
T ss_pred EEEEecCcCCCeEEEEECCCCCEEEEEeCC---CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe-CCCe
Confidence 2333455567889999865555555433 34666655543322211 111244678999999866665553 4444
Q ss_pred EEEE
Q psy5751 157 LECM 160 (232)
Q Consensus 157 i~~~ 160 (232)
|...
T Consensus 218 v~iW 221 (345)
T 3fm0_A 218 VRIW 221 (345)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4333
No 293
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.55 E-value=2.1 Score=33.36 Aligned_cols=196 Identities=8% Similarity=-0.027 Sum_probs=100.4
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-------eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-------VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND 75 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-------~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g 75 (232)
.+++|++..+.|.-+. .++ .|...++.... ....+......+.++++.+.++.|. +-...+.|...+++.
T Consensus 62 ~~v~~sp~~~~las~s-~D~-~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~la-s~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 62 RSVAWRPHTSLLAAGS-FDS-TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA-TCSRDKSVWIWETDE 138 (330)
T ss_dssp EEEEECTTSSEEEEEE-TTS-CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEE-EEETTSCEEEEECCT
T ss_pred EEEEECCCCCEEEEEe-CCC-cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCEEEEEeccC
Confidence 4788988666555444 344 67777764311 1122223345678899988655554 555667899998843
Q ss_pred C--CCE--EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCC-CEEEE
Q psy5751 76 D--QPK--VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRT-DELCW 149 (232)
Q Consensus 76 ~--~~~--~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~-~~Ly~ 149 (232)
. ..+ ..+.........++.+|....|.-+... +.|...+......+.+. ..........+++++.. +.+..
T Consensus 139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D---~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD---DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC---CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 2 222 2333455567899999855555444433 34555554433212221 11113456788998863 23334
Q ss_pred EECCCCcEEEEecCCCc-----e-EEE--ec--CCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751 150 VDADSKSLECMTIRNRV-----R-RKV--YS--NCTYPFGLSITDEKYYWTDWKTNRIESANKEG 204 (232)
Q Consensus 150 ~d~~~~~i~~~~~~g~~-----~-~~~--~~--~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g 204 (232)
+-...+.|...++++.. . ... .. .......+++..+.++.+-...+.|...+...
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEET
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCC
Confidence 44445555555554321 0 111 11 12234566665333445544556666666553
No 294
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.51 E-value=3.7 Score=36.17 Aligned_cols=190 Identities=9% Similarity=-0.028 Sum_probs=104.6
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS 83 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 83 (232)
++..|. ++.||++- .. .+++++................+..+..+ .+.||++... .|++++........+..
T Consensus 67 ~i~~d~-~g~lWigT--~~-Gl~~yd~~~~~f~~~~~~~~~~i~~i~~~--~g~lWigt~~--Gl~~~~~~~~~~~~~~~ 138 (758)
T 3ott_A 67 CGVIID-NTYLYMGT--DN-GILVYNYRADRYEQPETDFPTDVRTMALQ--GDTLWLGALN--GLYTYQLQSRKLTSFDT 138 (758)
T ss_dssp EEEEET-TTEEEEEE--TT-EEEEEETTTTEECCCSCCCCSCEEEEEEE--TTEEEEEETT--EEEEEETTTCCEEEECH
T ss_pred EEEEcC-CCcEEEEe--CC-CeEEEeCCCCEEECcccCCCceEEEEEec--CCcEEEEcCC--cceeEeCCCCeEEEecc
Confidence 455665 67787765 23 58888876543221000111233444433 6788877643 68888876544333311
Q ss_pred ----CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC--C--CCcceEEEeCCCCEEEEEECCCC
Q psy5751 84 ----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD--L--KLPNSLAVDFRTDELCWVDADSK 155 (232)
Q Consensus 84 ----~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~--~--~~p~~l~~d~~~~~Ly~~d~~~~ 155 (232)
........++.|. ++.||+.... -+.+.+........+..... + .....|..|..++.||+... +
T Consensus 139 ~~~~l~~~~i~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~--~ 211 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTK-DNQIYVGTYN----GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE--G 211 (758)
T ss_dssp HHHCCSCSCEEEEEECT-TCCEEEEETT----EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--E
T ss_pred CCCCcCCCeEEEEEEcC-CCCEEEEeCC----CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC--C
Confidence 1123456788886 7888887632 27777766543332211110 1 12456778876667777652 4
Q ss_pred cEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751 156 SLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSI 210 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i 210 (232)
.+.+++......+.+.. .......++.+ ++.||+.-. +-+.++++.....+.+
T Consensus 212 Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 212 YLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTD--NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEET--TEEEEECCTTSCCEEE
T ss_pred CCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeC--CceeEEecCCCcEEEE
Confidence 58888877654333321 11123455565 677887753 3588888775544433
No 295
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.35 E-value=2.1 Score=32.74 Aligned_cols=197 Identities=8% Similarity=0.013 Sum_probs=105.0
Q ss_pred EEEEEeCC-CCEEEEEEcCCCCcEEEEEcCCCce--eEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCC-
Q psy5751 3 IGITVDCV-EGQVYYSSVADKSSIKRAHLDGKNV--EDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQ- 77 (232)
Q Consensus 3 ~~i~~d~~-~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~- 77 (232)
.+++|.+. .+.++.+-..++ .|...++..... ...+......+..+++.+.. +.++.+-...+.|...++....
T Consensus 57 ~~v~~s~~~~g~~l~s~s~D~-~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 57 WRVDWAHPKFGTILASCSYDG-KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTT-EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred EEEEecCCCcCCEEEEEcCCC-EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence 36777542 244444544555 788888875421 12222233567888887751 3344455566889888886542
Q ss_pred -CEEEEeCCCCCceEEEEeCCC------------CeEEEEEcCCCCCcEEEEeCCCCCcEE-EE--EcCCCCCcceEEEe
Q psy5751 78 -PKVIVSKDLVNPRGIVVHPYY------------RKLFWSDWNRSGPKIEWSNLDGTDREI-FL--KAADLKLPNSLAVD 141 (232)
Q Consensus 78 -~~~~~~~~~~~p~~iavd~~~------------~~ly~~d~~~~~~~I~~~~~~g~~~~~-~~--~~~~~~~p~~l~~d 141 (232)
....+.........++..|.. +.++.+-.. .+.|...++....... +. ....-....+++++
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~--D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s 213 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC--CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC
Confidence 123344455566778887742 334444332 3456666655433211 11 11113456899999
Q ss_pred CCC--CEEEEEECCCCcEEEEecCCCc---eEEEec--C-CCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751 142 FRT--DELCWVDADSKSLECMTIRNRV---RRKVYS--N-CTYPFGLSIT-DEKYYWTDWKTNRIESANK 202 (232)
Q Consensus 142 ~~~--~~Ly~~d~~~~~i~~~~~~g~~---~~~~~~--~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~ 202 (232)
+.. +.+..+-+..+.|...+++... ...+.. . ......+++. .+.+..+-...+.|...+.
T Consensus 214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 974 4566666667777777776532 222331 2 2234567774 4444444444455544443
No 296
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.86 E-value=3.1 Score=33.48 Aligned_cols=151 Identities=10% Similarity=0.039 Sum_probs=90.0
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLV 87 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~ 87 (232)
++.++++-..++ .|...++........+.. ....+.++++++.++.|+ +-...+.|...++........+. ....
T Consensus 181 ~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 181 EKSLLVALTNLS-RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLI-LGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp SCEEEEEEETTS-EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEE-EEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred CCCEEEEEeCCC-eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEE-EEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 355555555556 899999986554334433 346789999988655555 55556889999987644333332 2333
Q ss_pred CceEEEEeCC---CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-------------------------CCCCcceEE
Q psy5751 88 NPRGIVVHPY---YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-------------------------DLKLPNSLA 139 (232)
Q Consensus 88 ~p~~iavd~~---~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-------------------------~~~~p~~l~ 139 (232)
....+++.|. ++.++++... .+.|...++........+... .......++
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSS--KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEEST--TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred ceEEEEeccccCCCccEEEEEcC--CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 4567766542 3445554433 456888888654433222211 011245688
Q ss_pred EeCCCCEEEEEECCCCcEEEEecCCCce
Q psy5751 140 VDFRTDELCWVDADSKSLECMTIRNRVR 167 (232)
Q Consensus 140 ~d~~~~~Ly~~d~~~~~i~~~~~~g~~~ 167 (232)
++ . +.+.++-...+.|...++...+.
T Consensus 337 ~~-~-~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 337 VS-N-DKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EE-T-TEEEEEEGGGTEEEEEETTCGGG
T ss_pred EC-C-ceEEEecCCCCeEEEEECCCccc
Confidence 88 4 46666767788899988876543
No 297
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.75 E-value=1.9 Score=36.44 Aligned_cols=152 Identities=9% Similarity=-0.107 Sum_probs=88.5
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEeCCCCCccEEEEe-ecCC-eEEEEeCCCCeEEEEeCCCCCC-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVITTNIRSPEGLTFD-WVNR-VLYWTDSQMDTISMANLNDDQP- 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~~~~~~p~gl~~d-~~~~-~ly~~d~~~~~I~~~~~~g~~~- 78 (232)
.+++|++ .+.|. +-..++ .|...+++.. .....+...-..+.+|+.. ...+ .++.+-...+.|...|+.....
T Consensus 270 ~sv~~s~-~~~la-sgs~Dg-tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 270 TTFDFLS-PTTVV-CGFKNG-FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT 346 (524)
T ss_dssp EEEEESS-SSEEE-EEETTS-EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH
T ss_pred EEEEecC-CCeEE-EEeCCC-EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc
Confidence 4677876 45544 444555 7999998843 2223333334567777432 2233 6777877788999999865432
Q ss_pred EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751 79 KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDADSKS 156 (232)
Q Consensus 79 ~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~ 156 (232)
..+.. ........++.+|. +..+.+... ...|...++..... ..+... ....+++++++++..| .+-+..+.
T Consensus 347 ~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~--d~tv~lwd~~~~~~~~~l~gH--~~~V~sva~Sp~g~~l-~Sgs~Dgt 420 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCPQ-IYSYIYSDG--ASSLRAVPSRAAFAVHPLVSR--ETTITAIGVSRLHPMV-LAGSADGS 420 (524)
T ss_dssp CEEEEECSCCSCCCEEEETT-TTEEEEECS--SSEEEEEETTCTTCCEEEEEC--SSCEEEEECCSSCCBC-EEEETTTE
T ss_pred cccccccccCcccceEeCCC-cCeEEEeCC--CCcEEEEECcccccceeeecC--CCceEEEEeCCCCCeE-EEEECCCE
Confidence 23322 12223567999984 444555433 34577777655433 333332 4577899999975544 44455666
Q ss_pred EEEEecC
Q psy5751 157 LECMTIR 163 (232)
Q Consensus 157 i~~~~~~ 163 (232)
|...++.
T Consensus 421 v~lwd~~ 427 (524)
T 2j04_B 421 LIITNAA 427 (524)
T ss_dssp EECCBSC
T ss_pred EEEEech
Confidence 6666554
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.38 E-value=4.9 Score=34.62 Aligned_cols=155 Identities=10% Similarity=-0.023 Sum_probs=81.8
Q ss_pred CCEEEEEEcCCCCcEEEEEc--CCCceeEEEeCCC----------CCccEEEEeecCCe----EEEEeCCCCeEEEEeCC
Q psy5751 11 EGQVYYSSVADKSSIKRAHL--DGKNVEDVITTNI----------RSPEGLTFDWVNRV----LYWTDSQMDTISMANLN 74 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~--~g~~~~~~~~~~~----------~~p~gl~~d~~~~~----ly~~d~~~~~I~~~~~~ 74 (232)
++.||++...++ .|+.++. +|....+.-.... ....++++.+.++. ||+... .++++.+|..
T Consensus 62 ~g~vyv~~~~~~-~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPN-NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTT-CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETT
T ss_pred CCEEEEEeCCCC-EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECC
Confidence 578888875344 6888888 4544333322110 11246777322445 887653 4688888875
Q ss_pred CCCCEEEEe-CCC----CCceEEEEeCCCCeEEEEEcCC---CCCcEEEEeCCCCCcEEEEEcC-CC-------------
Q psy5751 75 DDQPKVIVS-KDL----VNPRGIVVHPYYRKLFWSDWNR---SGPKIEWSNLDGTDREIFLKAA-DL------------- 132 (232)
Q Consensus 75 g~~~~~~~~-~~~----~~p~~iavd~~~~~ly~~d~~~---~~~~I~~~~~~g~~~~~~~~~~-~~------------- 132 (232)
.....=-.. ... ......++. ++.+|+..... ..+.|+.++.......--.... ..
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 443221111 110 001122343 57777754321 1356777776544332222211 00
Q ss_pred --------------------CCc---ceEEEeCCCCEEEEEECC---------------CCcEEEEecCCCceEE
Q psy5751 133 --------------------KLP---NSLAVDFRTDELCWVDAD---------------SKSLECMTIRNRVRRK 169 (232)
Q Consensus 133 --------------------~~p---~~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g~~~~~ 169 (232)
..+ ..+++|+..+.+|+.... ...|..++.+.++..-
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W 292 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKF 292 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEE
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceee
Confidence 000 246899988999998543 2479999998766543
No 299
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.34 E-value=3.1 Score=32.12 Aligned_cols=197 Identities=7% Similarity=-0.081 Sum_probs=102.3
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCCC-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQP- 78 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~- 78 (232)
.+++|++..+.|. +-..++ .|...++...... ..+......+..+++.+. .+.+..+-...+.|...++.....
T Consensus 17 ~~v~~s~~g~~la-sgs~D~-~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 17 HDAQMDYYGTRLA-TCSSDR-SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp EEEEECGGGCEEE-EEETTT-EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred EEeeEcCCCCEEE-EEeCCC-eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 4788888555554 444455 6888887654321 223333456778888542 234445666668899988876432
Q ss_pred E-EEEeCCCCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--CCCCCcceEEEeCCC----------
Q psy5751 79 K-VIVSKDLVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKA--ADLKLPNSLAVDFRT---------- 144 (232)
Q Consensus 79 ~-~~~~~~~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~--~~~~~p~~l~~d~~~---------- 144 (232)
. ..+.........++++|.. +.++.+-.. .+.|...++........... ......+.+++++..
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSS--DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECS--SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcC--CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccc
Confidence 2 2233445567899999852 444444432 34566666654422111111 111233456666541
Q ss_pred ------CEEEEEECCCCcEEEEecCCCce-EEEec---CCCceEEEEEE-C----CEEEEEeCCCCcEEEEeCC
Q psy5751 145 ------DELCWVDADSKSLECMTIRNRVR-RKVYS---NCTYPFGLSIT-D----EKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 145 ------~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~---~~~~p~gla~~-~----~~ly~td~~~~~i~~~~~~ 203 (232)
+.++.+-...+.|...+++.... +.+.. ......++++. . +.+..+-...+.|...+..
T Consensus 173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp SCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 23444444455555555553321 22211 22334567763 2 1455555556777777655
No 300
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.04 E-value=5.2 Score=32.17 Aligned_cols=217 Identities=6% Similarity=-0.013 Sum_probs=123.5
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-E
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-V 80 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~ 80 (232)
..+++|.+.++.|..+. .++ .|...++..................+ .+.... ..+....+.+...+....... .
T Consensus 150 V~sv~fspdg~~lasgs-~Dg-~v~iWd~~~~~~~~~~~~h~~~v~~~--s~~~~~-l~sgs~d~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGT-SSA-EVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYI-LSSGSRSGHIHHHDVRVAEHHVA 224 (420)
T ss_dssp EEEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEE--EEETTE-EEEEETTSEEEEEETTSSSCEEE
T ss_pred EEEEEECCCCCEEEEEE-CCC-eEEEEEcCCCcEEEEEeCCCCceEEE--eeCCCE-EEEEeCCCceeEeeecccceeeE
Confidence 35788988666655444 444 68888887655433333322334444 443444 445556678888887765543 3
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc---EEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCC
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR---EIFLKAADLKLPNSLAVDFRTDELCWVDA--DSK 155 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~---~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~ 155 (232)
.+.........+...+.+..+..... .+.+...+...... ..............+++.+....++.+-. ..+
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~---D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGN---DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred EecccccceeeeeecCCCCeeeeeec---cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 34456667788889885555544443 34566666543321 11111111344578888887666665533 356
Q ss_pred cEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC-CCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 156 SLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW-KTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 156 ~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~-~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
.|...++..+..............+++. .+.++.+.. ..+.|...+.. +.....+ ..+......|++-+++
T Consensus 302 ~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l---~gH~~~V~~l~~spdg 376 (420)
T 4gga_A 302 HIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL---KGHTSRVLSLTMSPDG 376 (420)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTS
T ss_pred EEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE---cCCCCCEEEEEEcCCC
Confidence 7888888866554444444455666663 556666643 45778888765 3333333 2334456677765543
No 301
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.76 E-value=5.8 Score=30.71 Aligned_cols=192 Identities=8% Similarity=-0.023 Sum_probs=101.2
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce--eEEE-eC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV--EDVI-TT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ- 77 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~-~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~- 77 (232)
.++++++. ++++-..++ .|...++..... ...+ .. ....+..+++.+.++.|. +-...+.|...++....
T Consensus 18 ~~~~~s~~---~las~~~D~-~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 18 WSFDFSQG---ILATGSTDR-KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp EEEEEETT---EEEEEESSS-CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEETTSCEEEEEC-----
T ss_pred eeeccCCC---EEEEEcCCC-EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEeCCCcEEEEEcccCcC
Confidence 36777763 444444455 788888875322 2223 12 334678899988655554 55556788888875321
Q ss_pred ------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEEE-EcCCCCCcceEEEeCCCCEEE
Q psy5751 78 ------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIFL-KAADLKLPNSLAVDFRTDELC 148 (232)
Q Consensus 78 ------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly 148 (232)
....+.........++++|.+..|.-+.. .+.|...+++. ...+.+. ....-.....+++++++..|.
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~---D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR---DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECTTSCEEEEEET---TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC---CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEE
Confidence 11223345556789999985555544443 34577777732 2222221 111134567899999855554
Q ss_pred EEECCCCcEEEEecCCCce---EEEecCCCceEEEEEEC---CEEEEEeCCCCcEEEEeCC
Q psy5751 149 WVDADSKSLECMTIRNRVR---RKVYSNCTYPFGLSITD---EKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 149 ~~d~~~~~i~~~~~~g~~~---~~~~~~~~~p~gla~~~---~~ly~td~~~~~i~~~~~~ 203 (232)
+-...+.|...+...... ..+.........+++.. +....+-...+.|...+..
T Consensus 170 -s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 170 -SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp -EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred -EEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 445566666665554322 22222333455677742 3444454445556555543
No 302
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=89.38 E-value=10 Score=33.02 Aligned_cols=151 Identities=11% Similarity=-0.003 Sum_probs=80.9
Q ss_pred CCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
++.||++... + .|+.++.. |....+.-.... ....+++++ ++.||+.. ..++++.+|.......
T Consensus 66 ~g~vyv~~~~-~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~-~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 66 DGVIYTSMSW-S-RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGT-LDGRLIALDAKTGKAI 140 (668)
T ss_dssp TTEEEEEEGG-G-EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEEC-TTSEEEEEETTTCCEE
T ss_pred CCEEEEECCC-C-eEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEc-CCCEEEEEECCCCCEe
Confidence 5778887643 3 57777765 433333211100 012456776 57888775 3478888887544322
Q ss_pred EEEeCC-----CCCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCc----------------
Q psy5751 80 VIVSKD-----LVNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLP---------------- 135 (232)
Q Consensus 80 ~~~~~~-----~~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p---------------- 135 (232)
=-.... .......++. ++.+|+...+.+ .+.|+.++.......--.... -..|
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV-PGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS-CCCTTSCCSSHHHHHHHTTC
T ss_pred eeeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc-CCCCCccccccccccccccC
Confidence 111110 1111122344 678887654311 356777777544332222210 0001
Q ss_pred ---------------ceEEEeCCCCEEEEEECCC------------------CcEEEEecCCCceEE
Q psy5751 136 ---------------NSLAVDFRTDELCWVDADS------------------KSLECMTIRNRVRRK 169 (232)
Q Consensus 136 ---------------~~l~~d~~~~~Ly~~d~~~------------------~~i~~~~~~g~~~~~ 169 (232)
..+++|+..+.+|+..... ..|..++.+.++..-
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W 284 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW 284 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee
Confidence 2479999889999885321 258999988766543
No 303
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=89.03 E-value=7 Score=30.67 Aligned_cols=206 Identities=7% Similarity=-0.021 Sum_probs=110.8
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV 82 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 82 (232)
.+++|++....|..+. .+ .+...+++... .+..........+++....+.+.++....+.|...|.........+
T Consensus 23 ~~v~fs~dg~~la~g~--~~-~~~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 23 TDYEFNQDQSCLILST--LK-SFEIYNVHPVA--HIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CEEEECTTSSEEEEEC--SS-EEEEEEETTEE--EEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEc--CC-EEEEEecCCcc--eeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 3688988666554433 23 45556655332 2222222345667777666777666666678888887655443333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC-CcEEEEEcCCCCCcce-EEEeCCCCEEEEE-ECCCCcEEE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT-DREIFLKAADLKLPNS-LAVDFRTDELCWV-DADSKSLEC 159 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~p~~-l~~d~~~~~Ly~~-d~~~~~i~~ 159 (232)
. ......++++++ ..++.+. ..+|...++... ..... +..|.+ +++.+ ..|.++ -...+.|..
T Consensus 98 ~-~~~~v~~v~~~~--~~~~~~~----~~~i~i~d~~~~~~~~~~-----~~~~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 98 K-VDAPVKDLFLSR--EFIVVSY----GDVISVFKFGNPWKRITD-----DIRFGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp E-CSSCEEEEEECS--SEEEEEE----TTEEEEEESSTTCCBSSC-----CEEEEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred E-CCCceEEEEEcC--CEEEEEE----cCEEEEEECCCCceeeEE-----eccCCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 3 333567777774 4555554 235777777654 11000 111333 34444 455554 455677777
Q ss_pred EecCCCc-----------------eEEEecCCCceEEEEEE-CCEEEEEeCCCCc-EEEEeCC-CCCcceEEeccCCcce
Q psy5751 160 MTIRNRV-----------------RRKVYSNCTYPFGLSIT-DEKYYWTDWKTNR-IESANKE-GERAPSIALDMMGTTY 219 (232)
Q Consensus 160 ~~~~g~~-----------------~~~~~~~~~~p~gla~~-~~~ly~td~~~~~-i~~~~~~-g~~~~~i~~~~~~~~~ 219 (232)
.+++... ...+.........+++. ++.+..+-...+. |...+.. +.....+.. ..+...
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~-g~h~~~ 242 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR-GLDRAD 242 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC-TTCCSC
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-CCCCCc
Confidence 7777543 23333334445678874 5556666666676 8777776 444333321 113445
Q ss_pred eEEEEEEcC
Q psy5751 220 MYGIAAVPS 228 (232)
Q Consensus 220 p~gi~~~~~ 228 (232)
...+++-++
T Consensus 243 v~~~~~s~~ 251 (355)
T 3vu4_A 243 VVDMKWSTD 251 (355)
T ss_dssp EEEEEECTT
T ss_pred EEEEEECCC
Confidence 566665443
No 304
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.45 E-value=8.4 Score=30.82 Aligned_cols=211 Identities=14% Similarity=0.086 Sum_probs=112.0
Q ss_pred EEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCceeEEEe----C--------------CCCCccEEEEeec-CCeEEEEe
Q psy5751 4 GITVDCV--EGQVYYSSVADKSSIKRAHLDGKNVEDVIT----T--------------NIRSPEGLTFDWV-NRVLYWTD 62 (232)
Q Consensus 4 ~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~----~--------------~~~~p~gl~~d~~-~~~ly~~d 62 (232)
++++++. .+.||..-.. . .|++..-.|...+.+.. + .......|++|+. .+.||+..
T Consensus 119 ~l~~~~~~~~~~l~~g~~~-g-gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~ 196 (394)
T 3b7f_A 119 WLTPGHASEPGTWYAGTSP-Q-GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGM 196 (394)
T ss_dssp EEEECCTTSTTCEEEEEET-T-EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEE
T ss_pred EEEeCCCCCCCEEEEEecC-C-cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEE
Confidence 5777763 5777775432 3 58876555555433321 0 0112357888863 46788775
Q ss_pred CCCCeEEEEeCCCCCCEEEEeC--C----------CCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc
Q psy5751 63 SQMDTISMANLNDDQPKVIVSK--D----------LVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKA 129 (232)
Q Consensus 63 ~~~~~I~~~~~~g~~~~~~~~~--~----------~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~ 129 (232)
.. +.|++.+-.|..-+.+... . ......|++++.+ +.||+... ..|++..-.|..-+.+ ..
T Consensus 197 ~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~----~gl~~s~D~G~tW~~~-~~ 270 (394)
T 3b7f_A 197 SS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH----CGIYRMDRREGVWKRI-GD 270 (394)
T ss_dssp ET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET----TEEEEEETTTTEEECG-GG
T ss_pred CC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC----CeEEEeCCCCCcceEC-CC
Confidence 43 3577765555443332210 0 1235788999853 78887653 3377776555432222 11
Q ss_pred CCCC-----CcceEEEeCC-CCEEEEEEC------------CCCcEEEEecCCCceEEEecCCCce--------EEEEEE
Q psy5751 130 ADLK-----LPNSLAVDFR-TDELCWVDA------------DSKSLECMTIRNRVRRKVYSNCTYP--------FGLSIT 183 (232)
Q Consensus 130 ~~~~-----~p~~l~~d~~-~~~Ly~~d~------------~~~~i~~~~~~g~~~~~~~~~~~~p--------~gla~~ 183 (232)
. +. ....|++++. .+.||+.-. ....|++..-.|..-+.+...++.+ .+++++
T Consensus 271 ~-l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~ 349 (394)
T 3b7f_A 271 A-MPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTAD 349 (394)
T ss_dssp G-SCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEEC
T ss_pred C-CCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEEC
Confidence 1 21 2245778763 467887631 1235666533333334443333321 246664
Q ss_pred ---CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751 184 ---DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP 227 (232)
Q Consensus 184 ---~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~ 227 (232)
.+.||+.- ..+.|++-.-.|...+.+.. ++...+.|++..
T Consensus 350 p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~~---~lp~~~~v~~~~ 392 (394)
T 3b7f_A 350 AHAPVGVYFGT-TGGEIWASADEGEHWQCIAS---HLPHIYAVQSAR 392 (394)
T ss_dssp CSSSCCEEEEC-TTSCEEEESSTTSBCEEEEC---SCSCEEEEEEEC
T ss_pred CCCCCEEEEEe-CCCeEEEECCCCCCceEccc---CCCCeeEEEEec
Confidence 25677753 34557766656777776653 233455666654
No 305
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=88.15 E-value=8.7 Score=30.63 Aligned_cols=73 Identities=12% Similarity=-0.046 Sum_probs=47.3
Q ss_pred EEEEeC-------CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751 4 GITVDC-------VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD 76 (232)
Q Consensus 4 ~i~~d~-------~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~ 76 (232)
+++|.+ .++.+..+--.++ .|...++............-..+.++++.+.+..+..+-...+.|...|+...
T Consensus 141 ~v~~~p~~~~~~~~d~~~las~s~D~-tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 141 DIDIADVYSADNRLAEQVIASVGDDC-TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEECTTCSEEEEEEEEEETTS-EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEEEccccccccCCCCCEEEEEECCC-eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 566654 2456666666666 88888876544322222333567888888866666667667788999887654
Q ss_pred C
Q psy5751 77 Q 77 (232)
Q Consensus 77 ~ 77 (232)
.
T Consensus 220 ~ 220 (393)
T 4gq1_A 220 L 220 (393)
T ss_dssp C
T ss_pred c
Confidence 4
No 306
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=87.83 E-value=8.5 Score=30.18 Aligned_cols=182 Identities=10% Similarity=0.021 Sum_probs=102.0
Q ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-CC-EEEE
Q psy5751 5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-QP-KVIV 82 (232)
Q Consensus 5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~-~~~~ 82 (232)
+++.+..+.+.++...++ .|...+.........+.. ...+.++++.. +.++++. .+.|...++... .. ..+.
T Consensus 64 ~~~~~~~~~~~~~~~~d~-~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~--~~~~~~~--~~~i~i~d~~~~~~~~~~~~ 137 (355)
T 3vu4_A 64 VRMLHRTNYVAFVTGVKE-VVHIWDDVKKQDVSRIKV-DAPVKDLFLSR--EFIVVSY--GDVISVFKFGNPWKRITDDI 137 (355)
T ss_dssp EEECTTSSEEEEECSSTT-EEEEEETTTTEEEEEEEC-SSCEEEEEECS--SEEEEEE--TTEEEEEESSTTCCBSSCCE
T ss_pred EEEcCCCCEEEEEECCcc-EEEEEECCCCcEEEEEEC-CCceEEEEEcC--CEEEEEE--cCEEEEEECCCCceeeEEec
Confidence 445555666666655556 788888765443222222 23556666663 4555553 357888888765 21 1111
Q ss_pred eCCCCCceEE-EEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-----------------cEEEEEcCCCCCcceEEEeCCC
Q psy5751 83 SKDLVNPRGI-VVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-----------------REIFLKAADLKLPNSLAVDFRT 144 (232)
Q Consensus 83 ~~~~~~p~~i-avd~~~~~ly~~d~~~~~~~I~~~~~~g~~-----------------~~~~~~~~~~~~p~~l~~d~~~ 144 (232)
. |.++ ++.+ +.+.++... ..+.|...++.... ...+ . ..-.....+++++++
T Consensus 138 ~-----~~~~~~~s~--~~la~~sg~-~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~h~~~v~~~~~s~~g 207 (355)
T 3vu4_A 138 R-----FGGVCEFSN--GLLVYSNEF-NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-K-AHTNPIKMVRLNRKS 207 (355)
T ss_dssp E-----EEEEEEEET--TEEEEEESS-CTTCEEEEECCC------------------CCEEE-C-CCSSCEEEEEECTTS
T ss_pred c-----CCceEEEEc--cEEEEeCCC-cCcEEEEEECCCCCccccccccccccccCcccEEE-E-ccCCceEEEEECCCC
Confidence 1 4433 3443 455444222 24567777776533 2222 1 114567899999975
Q ss_pred CEEEEEECCCCc-EEEEecCCCce-EEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 145 DELCWVDADSKS-LECMTIRNRVR-RKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 145 ~~Ly~~d~~~~~-i~~~~~~g~~~-~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..| .+-+..+. |...++..... ..+.. ......++++. ++.+..+-...+.|...+..
T Consensus 208 ~~l-~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 208 DMV-ATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SEE-EEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CEE-EEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 555 45456776 88888885544 33431 34445688885 45555555556777777765
No 307
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=87.14 E-value=10 Score=30.26 Aligned_cols=158 Identities=10% Similarity=-0.054 Sum_probs=80.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee-EEE------------------------eCCCCCccEEEEeecCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE-DVI------------------------TTNIRSPEGLTFDWVNR 56 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~-~~~------------------------~~~~~~p~gl~~d~~~~ 56 (232)
+.+++|++.+..++++-..++ .|...++...... ... .........+++....+
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~-~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg 267 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNG-NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG 267 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTS-EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT
T ss_pred cEEEEECCCCCceEEecCCCC-EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCC
Confidence 458899987666666665666 7888887643211 100 01112344555553333
Q ss_pred eEEEEeCCCCeEEEEeCCCCCCEEEEe------------------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC
Q psy5751 57 VLYWTDSQMDTISMANLNDDQPKVIVS------------------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118 (232)
Q Consensus 57 ~ly~~d~~~~~I~~~~~~g~~~~~~~~------------------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~ 118 (232)
....+-...+.+...++........+. .......+....+..+.+|.+... ..+.|+..+.
T Consensus 268 ~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs-~Dg~V~lwd~ 346 (393)
T 4gq1_A 268 SGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS-QHGLIQLINT 346 (393)
T ss_dssp CEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET-TTTEEEEEET
T ss_pred CEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC-CCCEEEEEEC
Confidence 444455566777777765433211110 011122233344445555555433 2567888887
Q ss_pred CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751 119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 119 ~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g 164 (232)
............ -.....+++++++..|-.+. .+.+..+++.|
T Consensus 347 ~~~~~~~~~~~~-~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 347 YEKDSNSIPIQL-GMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp TCTTCCEEEEEC-SSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred CCCcEEEEecCC-CCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 655433333322 34568999999977775553 34455554443
No 308
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=85.03 E-value=11 Score=28.84 Aligned_cols=198 Identities=10% Similarity=-0.027 Sum_probs=98.8
Q ss_pred EEEEEeCC-CCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCC
Q psy5751 3 IGITVDCV-EGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQP 78 (232)
Q Consensus 3 ~~i~~d~~-~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~ 78 (232)
.+++|.+. ++.++++-..++ .|...++.....+ ..+......+.++++.+.. +.++.+-...+.|...++.+...
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~ 139 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDR-KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 139 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTS-CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred EEEEeCCCCCCCEEEEEECCC-EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence 35666542 233344444445 6777777653221 2222234567889998752 44555666678888888766432
Q ss_pred EEEE---eCCCCCceEEEEeCCC----------------CeEEEEEcCCCCCcEEEEeCCCCCc-EEEEE-cCCCCCcce
Q psy5751 79 KVIV---SKDLVNPRGIVVHPYY----------------RKLFWSDWNRSGPKIEWSNLDGTDR-EIFLK-AADLKLPNS 137 (232)
Q Consensus 79 ~~~~---~~~~~~p~~iavd~~~----------------~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~-~~~~~~p~~ 137 (232)
.... .........++.+|.. +.++.+-.. .+.|...++..... ..+.. ...-....+
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~--D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC--DNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT--TSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecC--CCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 2111 1122233455555431 233333322 33444444443321 12111 111234678
Q ss_pred EEEeCCC---CEEEEEECCCCcEEEEecCCCc-----eEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 138 LAVDFRT---DELCWVDADSKSLECMTIRNRV-----RRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 138 l~~d~~~---~~Ly~~d~~~~~i~~~~~~g~~-----~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
+++++.. +.+..+-+..+.|...+++... .+.+.........+++. .+.+..+-...+.|...+..
T Consensus 218 v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 8998864 2445555667777777776421 12232233445677774 44444444445555555543
No 309
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.82 E-value=12 Score=28.15 Aligned_cols=154 Identities=10% Similarity=-0.003 Sum_probs=92.6
Q ss_pred CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC----EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751 44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP----KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119 (232)
Q Consensus 44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~ 119 (232)
.....+++...++.| ++-...+.|...++..... .............++..+..+.+.....+.....|...+..
T Consensus 151 ~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred CceEEEEEcCCCCEE-EEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 455666666655544 4555567788888754321 12222344455778888877777665544445667777777
Q ss_pred CCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC-CCCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCc
Q psy5751 120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNR 196 (232)
Q Consensus 120 g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~-~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~ 196 (232)
.......... ......+.+.+..+.++.+-. ..+.|...+++.......+. ......++++. ++.+.+|-...+.
T Consensus 230 ~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 230 SGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp TCCEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred cccccccccc--eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 6655544443 456788899998888877653 46788888887654433332 33445677774 4444455444455
Q ss_pred EEEE
Q psy5751 197 IESA 200 (232)
Q Consensus 197 i~~~ 200 (232)
|..-
T Consensus 308 v~iW 311 (318)
T 4ggc_A 308 LRLW 311 (318)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 310
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.46 E-value=16 Score=29.27 Aligned_cols=177 Identities=9% Similarity=0.000 Sum_probs=108.5
Q ss_pred cEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC----EEEEeCCCCCceEEEEeCCC
Q psy5751 24 SIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP----KVIVSKDLVNPRGIVVHPYY 98 (232)
Q Consensus 24 ~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~p~~iavd~~~ 98 (232)
.+...+...... ...+........++...+.++.+. +....+.+...+...... .............++..|..
T Consensus 210 ~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~-s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~ 288 (420)
T 4gga_A 210 HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA-SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 288 (420)
T ss_dssp EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC
T ss_pred ceeEeeecccceeeEEecccccceeeeeecCCCCeee-eeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc
Confidence 455555553222 122333445667777777555554 555557788877654321 12222344566789999888
Q ss_pred CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC-CCCcEEEEecCCCce-EEEecCCCc
Q psy5751 99 RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECMTIRNRVR-RKVYSNCTY 176 (232)
Q Consensus 99 ~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~-~~~~i~~~~~~g~~~-~~~~~~~~~ 176 (232)
+.++.+..+...+.|...++........+.. ......+.+.+.++.|+.+-. ..+.|...+++.... ..+......
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~ 366 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR 366 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred ccEEEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 8777765544456788888876554444443 457788999999888887754 467888888876544 333223444
Q ss_pred eEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 177 PFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 177 p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..++++. ++...+|-...+.|..-+..
T Consensus 367 V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 5688884 55556665556666655544
No 311
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=83.32 E-value=23 Score=30.99 Aligned_cols=150 Identities=10% Similarity=-0.004 Sum_probs=79.8
Q ss_pred CCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751 11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK 79 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 79 (232)
++.||++... + .|+.++.. |....+.-.... ....+++++ ++.||+... .++++.+|.......
T Consensus 70 ~g~vyv~~~~-~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~v~v~~~-dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 70 DGVMYTTGPF-S-VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW--KGKVYVGVL-DGRLEAIDAKTGQRA 144 (689)
T ss_dssp TTEEEEECGG-G-CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEE
T ss_pred CCEEEEEcCC-C-eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE--CCEEEEEcc-CCEEEEEECCCCCEe
Confidence 6788887643 3 58888875 443333211110 012356666 678887753 468888887544322
Q ss_pred EEEeCC------CCCceEEEEeCCCCeEEEEEcCC---CCCcEEEEeCCCCCcEEEEEcCCCCCc---------------
Q psy5751 80 VIVSKD------LVNPRGIVVHPYYRKLFWSDWNR---SGPKIEWSNLDGTDREIFLKAADLKLP--------------- 135 (232)
Q Consensus 80 ~~~~~~------~~~p~~iavd~~~~~ly~~d~~~---~~~~I~~~~~~g~~~~~~~~~~~~~~p--------------- 135 (232)
=-.... .......++. ++.+|+...+. ..+.|+..+.......--.... -..|
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~ 221 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTV-PGDPKLPPEGKGMEIAAKT 221 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS-CCCTTSCCCSHHHHHHHTT
T ss_pred eeecCcCCCCCCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEeccc-CCCcccccccccccccccc
Confidence 111111 0111122343 67787764321 1456777776544332222210 0000
Q ss_pred ----------------ceEEEeCCCCEEEEEECCC------------------CcEEEEecCCCceE
Q psy5751 136 ----------------NSLAVDFRTDELCWVDADS------------------KSLECMTIRNRVRR 168 (232)
Q Consensus 136 ----------------~~l~~d~~~~~Ly~~d~~~------------------~~i~~~~~~g~~~~ 168 (232)
..+++|+..+.+|+..... ..|..++.+.++..
T Consensus 222 ~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~ 288 (689)
T 1yiq_A 222 WFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV 288 (689)
T ss_dssp CCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred cCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee
Confidence 2578999889999875431 24999999866554
No 312
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=81.38 E-value=20 Score=29.00 Aligned_cols=159 Identities=10% Similarity=-0.001 Sum_probs=89.2
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---------eeE-EEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN---------VED-VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---------~~~-~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~ 73 (232)
.+++.+..+.++.+... .+...+++... .+. ... .+..+..|++ .++.|+++ ..+.|.++++
T Consensus 42 lLais~~~gll~a~~~~---~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~V~~l~f--d~~~L~v~--~~~~l~v~dv 113 (388)
T 1xip_A 42 NLDISNSKSLFVAASGS---KAVVGELQLLRDHITSDSTPLTFKWEK-EIPDVIFVCF--HGDQVLVS--TRNALYSLDL 113 (388)
T ss_dssp CEEEETTTTEEEEEETT---EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTTEEEEEE--ETTEEEEE--ESSEEEEEES
T ss_pred EEEEcCCCCEEEEeCCC---EEEEEEhhHhhhhhccccccccceEEe-eCCCeeEEEE--CCCEEEEE--cCCcEEEEEc
Confidence 46777777777766654 45555544211 111 111 2334899999 47889988 4468999998
Q ss_pred CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751 74 NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD 153 (232)
Q Consensus 74 ~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~ 153 (232)
............-....++..- ...+..... .+.++..++.......+ .....+++.++.+ +++. ..
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~--~p~~av~~~---dG~L~v~dl~~~~~~~~-----~~~Vs~v~WSpkG--~~vg-~~ 180 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNV--NNTLVILNS---VNDLSALDLRTKSTKQL-----AQNVTSFDVTNSQ--LAVL-LK 180 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEEC--SSEEEEEET---TSEEEEEETTTCCEEEE-----EESEEEEEECSSE--EEEE-ET
T ss_pred hhhhccCccceeecceeeEEec--CCCEEEEEC---CCCEEEEEccCCccccc-----cCCceEEEEcCCc--eEEE-Ec
Confidence 7766443222111123333322 223333332 35577777764443332 2357789999974 4444 44
Q ss_pred CCcEEEEecCCCc---eEEE------ec---CCCceEEEEEE
Q psy5751 154 SKSLECMTIRNRV---RRKV------YS---NCTYPFGLSIT 183 (232)
Q Consensus 154 ~~~i~~~~~~g~~---~~~~------~~---~~~~p~gla~~ 183 (232)
++.+..+.+++.. ..++ .+ .-.++.+|.+-
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl 222 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTIL 222 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEES
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEe
Confidence 6778888888876 3344 11 23456677775
No 313
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=78.95 E-value=32 Score=30.00 Aligned_cols=65 Identities=11% Similarity=-0.057 Sum_probs=36.8
Q ss_pred CcEEEEecCCCceEEEec-CCCceEE-EEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751 155 KSLECMTIRNRVRRKVYS-NCTYPFG-LSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM 220 (232)
Q Consensus 155 ~~i~~~~~~g~~~~~~~~-~~~~p~g-la~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p 220 (232)
+.+..+|+..++..--.. ......| ++..++.+|.. ...+.+..++.. |+.+..+..+......|
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 522 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQPAASGVMAAP 522 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCccceeeeCCCCcccCc
Confidence 568888887665432222 2211122 23357777776 456888999876 67666666553333334
No 314
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=78.91 E-value=31 Score=29.69 Aligned_cols=85 Identities=5% Similarity=-0.010 Sum_probs=51.2
Q ss_pred cceEEEeCCCCEEEEEEC--------------------------------------CCCcEEEEecCCCceEEEec-CCC
Q psy5751 135 PNSLAVDFRTDELCWVDA--------------------------------------DSKSLECMTIRNRVRRKVYS-NCT 175 (232)
Q Consensus 135 p~~l~~d~~~~~Ly~~d~--------------------------------------~~~~i~~~~~~g~~~~~~~~-~~~ 175 (232)
..++++|+.++.+|+... ..+.+..+|+..++..--.. ...
T Consensus 395 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~ 474 (599)
T 1w6s_A 395 QGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA 474 (599)
T ss_dssp SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC
T ss_pred CCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC
Confidence 357899999898888521 12456667776554322221 211
Q ss_pred ceEE-EEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751 176 YPFG-LSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM 220 (232)
Q Consensus 176 ~p~g-la~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p 220 (232)
..-| ++..++.+|+... .+.+..++.. |+.+...+++......|
T Consensus 475 ~~~g~~~tagg~vf~gt~-dg~l~A~D~~tG~~lW~~~l~~g~~~~P 520 (599)
T 1w6s_A 475 VWGGTMATAGDLVFYGTL-DGYLKARDSDTGDLLWKFKIPSGAIGYP 520 (599)
T ss_dssp CCSBCEEETTTEEEEECT-TSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred ccCcceEecCCEEEEECC-CCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence 1123 4556888888654 5788899876 77766666654444344
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=78.69 E-value=19 Score=27.28 Aligned_cols=207 Identities=9% Similarity=0.044 Sum_probs=115.0
Q ss_pred CCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCC------CCeEEEEeCCCCCCEE
Q psy5751 11 EGQVYYSSVADK---SSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ------MDTISMANLNDDQPKV 80 (232)
Q Consensus 11 ~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~------~~~I~~~~~~g~~~~~ 80 (232)
++.||+.--... ..+.++++.....+++-... ...-.++++. ++.||+.... ...++++|+....=..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 567777643211 26888888876654443211 1111233332 6789986432 3568888887654333
Q ss_pred EEeCCCCCc---eEEEEeCCCCeEEEEEcC---CC----CCcEEEEeCCCCCcEEEEEcCCCCCc---ceEEEeCCCCEE
Q psy5751 81 IVSKDLVNP---RGIVVHPYYRKLFWSDWN---RS----GPKIEWSNLDGTDREIFLKAADLKLP---NSLAVDFRTDEL 147 (232)
Q Consensus 81 ~~~~~~~~p---~~iavd~~~~~ly~~d~~---~~----~~~I~~~~~~g~~~~~~~~~~~~~~p---~~l~~d~~~~~L 147 (232)
+. .+..| ..+++. ++.||+.... .. ...+++.++....-+.+.. +..| .++++. +++|
T Consensus 133 ~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~i 203 (306)
T 3ii7_A 133 KP--SMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP---MIEARKNHGLVFV--KDKI 203 (306)
T ss_dssp EC--CCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEE
T ss_pred CC--CCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC---ccchhhcceEEEE--CCEE
Confidence 32 23222 244444 7899987431 11 3458888887654333321 2222 123332 4789
Q ss_pred EEEECC-----CCcEEEEecCCCceEEEecCCCce---EEEEEECCEEEEEeC-----CCCcEEEEeCCCCCcceEEecc
Q psy5751 148 CWVDAD-----SKSLECMTIRNRVRRKVYSNCTYP---FGLSITDEKYYWTDW-----KTNRIESANKEGERAPSIALDM 214 (232)
Q Consensus 148 y~~d~~-----~~~i~~~~~~g~~~~~~~~~~~~p---~gla~~~~~ly~td~-----~~~~i~~~~~~g~~~~~i~~~~ 214 (232)
|+.-.. ...+++.++....-+.+. .++.| .++++.++.||+.-. ....+..+++.....+.+.. .
T Consensus 204 ~v~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~ 281 (306)
T 3ii7_A 204 FAVGGQNGLGGLDNVEYYDIKLNEWKMVS-PMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK-V 281 (306)
T ss_dssp EEECCEETTEEBCCEEEEETTTTEEEECC-CCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE-E
T ss_pred EEEeCCCCCCCCceEEEeeCCCCcEEECC-CCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC-c
Confidence 988221 356889888865444332 23222 356667999999865 23578889998877775532 2
Q ss_pred CCcceeEEEEEEcCCC
Q psy5751 215 MGTTYMYGIAAVPSSC 230 (232)
Q Consensus 215 ~~~~~p~gi~~~~~~~ 230 (232)
..+....+++++.+.|
T Consensus 282 ~~~r~~~~~~~~~~~~ 297 (306)
T 3ii7_A 282 RAFPVTSCLICVVDTC 297 (306)
T ss_dssp ECCSCTTCEEEEEECC
T ss_pred ccccceeEEEEECCcc
Confidence 2334445566666555
No 316
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=77.32 E-value=38 Score=29.96 Aligned_cols=204 Identities=12% Similarity=0.058 Sum_probs=107.8
Q ss_pred eEEEEEeCCC-CEEEEEEcCCCCcEEEEEcCCCceeEEEeC-----------CCCCccEEEEeec-CCeEEEEeCC----
Q psy5751 2 LIGITVDCVE-GQVYYSSVADKSSIKRAHLDGKNVEDVITT-----------NIRSPEGLTFDWV-NRVLYWTDSQ---- 64 (232)
Q Consensus 2 ~~~i~~d~~~-~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-----------~~~~p~gl~~d~~-~~~ly~~d~~---- 64 (232)
..+|.+++.+ +.+|++ .... .|++-.=.|...+.+... .......|++|+. .+.+|.+...
T Consensus 23 i~~i~~~p~~~~~~y~~-~~~g-gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~ 100 (763)
T 3a0f_A 23 ISGLVAHPTEKDLIYAR-TDIG-GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQW 100 (763)
T ss_dssp EEEEEECSSSTTCEEEE-ESSS-CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTT
T ss_pred eeEEEeCCCCCCEEEEE-eccC-cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccC
Confidence 4688999977 455555 3344 688765555554444321 2235678899874 4678875431
Q ss_pred --CCeEEEEeCCCCC-CEEEEeCCC-----CCc--eEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC--
Q psy5751 65 --MDTISMANLNDDQ-PKVIVSKDL-----VNP--RGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-- 131 (232)
Q Consensus 65 --~~~I~~~~~~g~~-~~~~~~~~~-----~~p--~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-- 131 (232)
...|++.+-.|.. .+....... .+. ..|+++|.+ +.+|.... ...|++..-.|..=+.+.....
T Consensus 101 ~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~---~~~l~~S~DgG~TW~~~~~~~~~~ 177 (763)
T 3a0f_A 101 DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR---TQGLWRSTDRAQTWSRMNQLPDSS 177 (763)
T ss_dssp CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS---SSCEEEESSTTSSCEECTTSCCCS
T ss_pred CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC---CCcEEEECCCCcCccccccCcccC
Confidence 3556665544543 333221111 111 369999864 67776542 2457766544443332221100
Q ss_pred --CCCcceEEEeCCC-CEEEEEECCCCcEEEEecCCCceEEEecC----------------------CCceEEEEEE-CC
Q psy5751 132 --LKLPNSLAVDFRT-DELCWVDADSKSLECMTIRNRVRRKVYSN----------------------CTYPFGLSIT-DE 185 (232)
Q Consensus 132 --~~~p~~l~~d~~~-~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~----------------------~~~p~gla~~-~~ 185 (232)
......|++|+.+ ++||++-...+.+++..-.|..-+.+... ...+..+++. ++
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g 257 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNG 257 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESSTTCEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTS
T ss_pred CCccceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCC
Confidence 1223467888753 57888865433566654334332333211 1123445554 67
Q ss_pred EEEEEe--------CCCCcEEEEeCCCCCcceE
Q psy5751 186 KYYWTD--------WKTNRIESANKEGERAPSI 210 (232)
Q Consensus 186 ~ly~td--------~~~~~i~~~~~~g~~~~~i 210 (232)
.||.+- ...+.+++-+-.|...+.+
T Consensus 258 ~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~ 290 (763)
T 3a0f_A 258 RLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHI 290 (763)
T ss_dssp CEEEEEESSCSSSCCCCEEEEEEETTTTEEEEC
T ss_pred cEEEEeccCCCCCCCcceeEEEEeCCCCceEEC
Confidence 888873 1235677765556666644
No 317
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.93 E-value=26 Score=27.85 Aligned_cols=172 Identities=12% Similarity=0.072 Sum_probs=93.8
Q ss_pred EEEEEeCC-CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC----C--------CCccEEEEeecC-CeEEEEeCCCCeE
Q psy5751 3 IGITVDCV-EGQVYYSSVADKSSIKRAHLDGKNVEDVITTN----I--------RSPEGLTFDWVN-RVLYWTDSQMDTI 68 (232)
Q Consensus 3 ~~i~~d~~-~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~----~--------~~p~gl~~d~~~-~~ly~~d~~~~~I 68 (232)
.+|.+++. .+.||++... . .|++..-.|...+.+.... + ..+..|++++.+ +.||+... +.|
T Consensus 180 ~~i~~d~~~~~~l~vg~~~-g-gl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl 255 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSS-G-GVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGI 255 (394)
T ss_dssp EEEEECTTCTTCEEEEEET-B-EEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEE
T ss_pred eEEEECCCCCCEEEEEECC-C-CEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--CeE
Confidence 36788874 5678877533 2 4777555555443332110 0 235678888743 67877653 457
Q ss_pred EEEeCCCCCCEEEEeCCCC-----CceEEEEeCC-CCeEEEEEcC----------CCCCcEEEEeCCCCCcEEEEEcCCC
Q psy5751 69 SMANLNDDQPKVIVSKDLV-----NPRGIVVHPY-YRKLFWSDWN----------RSGPKIEWSNLDGTDREIFLKAADL 132 (232)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~~-----~p~~iavd~~-~~~ly~~d~~----------~~~~~I~~~~~~g~~~~~~~~~~~~ 132 (232)
++.+-.|..-+.+. ..+. ....++++|. .+.||+.... .....|++..-.|..-+.+... +
T Consensus 256 ~~s~D~G~tW~~~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~g--l 332 (394)
T 3b7f_A 256 YRMDRREGVWKRIG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG--L 332 (394)
T ss_dssp EEEETTTTEEECGG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBT--S
T ss_pred EEeCCCCCcceECC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCC--C
Confidence 77765554322111 1121 2246788763 4778876321 1124577654444444443322 2
Q ss_pred CC--------cceEEEeCCC-CEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE
Q psy5751 133 KL--------PNSLAVDFRT-DELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182 (232)
Q Consensus 133 ~~--------p~~l~~d~~~-~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~ 182 (232)
.. ..++++|+.+ +.||+. ...+.|++..-.|..-+.+...++....+++
T Consensus 333 p~~~~~~~~~~~~~~~~p~~~~~l~~g-~~~g~l~~S~D~G~tW~~~~~~lp~~~~v~~ 390 (394)
T 3b7f_A 333 PTDQAWLTVKRQAMTADAHAPVGVYFG-TTGGEIWASADEGEHWQCIASHLPHIYAVQS 390 (394)
T ss_dssp CCSSCCCCCCTBSEEECCSSSCCEEEE-CTTSCEEEESSTTSBCEEEECSCSCEEEEEE
T ss_pred CCccccceEEEEEEEECCCCCCEEEEE-eCCCeEEEECCCCCCceEcccCCCCeeEEEE
Confidence 22 2468998864 568876 3345688776666555666666655555554
No 318
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=76.87 E-value=21 Score=26.71 Aligned_cols=215 Identities=7% Similarity=-0.004 Sum_probs=113.7
Q ss_pred EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-EE
Q psy5751 3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-VI 81 (232)
Q Consensus 3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~ 81 (232)
.+++|++.++.|..+. .++ .|...+++............... .++......+. +....+.+...+....... ..
T Consensus 71 ~~v~~~~~~~~l~sgs-~Dg-~v~iw~~~~~~~~~~~~~h~~~~--~~~~~~~~~l~-s~~~~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGT-SSA-EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILS-SGSRSGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCE--EEEEEETTEEE-EEETTSEEEEEETTSSSCEEEE
T ss_pred EEEEECCCCCEEEEEE-CCC-cEEEeecCCceeEEEecCccceE--EEeecCCCEEE-EEecCCceEeeecCCCceeEEE
Confidence 4778888655554443 445 68888887655433333322233 34444345444 4445566666666554433 33
Q ss_pred EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc---EEEEEcCCCCCcceEEEeCCCCEEEEEE--CCCCc
Q psy5751 82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR---EIFLKAADLKLPNSLAVDFRTDELCWVD--ADSKS 156 (232)
Q Consensus 82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~---~~~~~~~~~~~p~~l~~d~~~~~Ly~~d--~~~~~ 156 (232)
..........++..+....|..+.. .+.|...++..... ..............+++.+.+..+.... ...+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGN---DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH 222 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEET---TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE
T ss_pred EcCccCceEEEEEcCCCCEEEEEec---CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE
Confidence 3345566778888875555544443 34577777654321 1111111133446777777666655432 33456
Q ss_pred EEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEe-CCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751 157 LECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD-WKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPS 228 (232)
Q Consensus 157 i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td-~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~ 228 (232)
|...+..................+++. .+.++.+- ...+.|...+.. ++....+. .+......|++-++
T Consensus 223 i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~---gH~~~V~~l~~spd 295 (318)
T 4ggc_A 223 IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GHTSRVLSLTMSPD 295 (318)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CCSSCEEEEEECTT
T ss_pred EEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCC
Confidence 777777765554444444444555553 55565553 345778877766 33333332 33445566666544
No 319
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=75.94 E-value=37 Score=29.14 Aligned_cols=167 Identities=5% Similarity=-0.034 Sum_probs=103.0
Q ss_pred eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC----CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751 2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI----RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77 (232)
Q Consensus 2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~----~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 77 (232)
..+++|.+.+..|-.+... + .+...+.++ .. ..+.... ....++++.+.++.|+.+.. .+.|...++.+..
T Consensus 88 V~~vawSPdG~~LAs~s~d-g-~V~iwd~~~-~l-~~l~~~~~~~~~sv~svafSPDG~~LAsgs~-DGtVkIWd~~~~~ 162 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNN-G-NVSVFKDNK-ML-TNLDSKGNLSSRTYHCFEWNPIESSIVVGNE-DGELQFFSIRKNS 162 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-S-CEEEEETTE-EE-EECCCSSCSTTTCEEEEEECSSSSCEEEEET-TSEEEEEECCCCT
T ss_pred EEEEEECCCCCEEEEEeCC-C-cEEEEeCCc-ee-eeccCCCccccccEEEEEEcCCCCEEEEEcC-CCEEEEEECCCCc
Confidence 4688999966666655544 3 577777554 11 1112111 24788999998888886654 5789999998875
Q ss_pred C--------EEEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE---EEEEcCCCCCcceEEEeCC
Q psy5751 78 P--------KVIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE---IFLKAADLKLPNSLAVDFR 143 (232)
Q Consensus 78 ~--------~~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~---~~~~~~~~~~p~~l~~d~~ 143 (232)
. ..+- ..+......++..| +| |-.+.. ...|+..++++.... ..+....-....++++.
T Consensus 163 l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg-Laass~---D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV-LVAALS---NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp TTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE-EEEEET---TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred cccccceeeeeeecccccccccEEEEEEcC-Cc-EEEEeC---CCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 3 2221 22345778999998 55 433332 355888888877632 12221113467899998
Q ss_pred CCEEEEEECCCCcEEEEecCCCceEEEe-cCCCceEEEEE
Q psy5751 144 TDELCWVDADSKSLECMTIRNRVRRKVY-SNCTYPFGLSI 182 (232)
Q Consensus 144 ~~~Ly~~d~~~~~i~~~~~~g~~~~~~~-~~~~~p~gla~ 182 (232)
++.|-.+ . .+.|...+..+.....+. .......++++
T Consensus 236 g~~LASa-~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 236 DYKVVLT-C-PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp TTEEEEE-C-SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred CCEEEEE-e-CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 3666555 3 578999999987764443 33333345555
No 320
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=75.47 E-value=44 Score=29.73 Aligned_cols=204 Identities=13% Similarity=0.077 Sum_probs=109.0
Q ss_pred eEEEEEeCCC-CEEEEEEcCCCCcEEEEEcCCCceeEEEeC------CCCCccEEEEeec-CCeEEEEeCC-C----CeE
Q psy5751 2 LIGITVDCVE-GQVYYSSVADKSSIKRAHLDGKNVEDVITT------NIRSPEGLTFDWV-NRVLYWTDSQ-M----DTI 68 (232)
Q Consensus 2 ~~~i~~d~~~-~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~------~~~~p~gl~~d~~-~~~ly~~d~~-~----~~I 68 (232)
..+|++++.+ +.+|+.... . .|+|-.=.|...+.+... .......|++|+. .+.+|++-.. . ..|
T Consensus 17 i~~i~~~p~~~~~~~a~~~~-g-gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 17 ITGIVAHPKTKDLLYARTDI-G-GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp EEEEEECSSSTTCEEEEESS-S-CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred EEEEEECCCCCCEEEEEecC-C-CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEE
Confidence 4578898864 566665433 3 588766556555443321 1235788999973 3578876432 2 566
Q ss_pred EEEeCCCCCCEEEEe-CCC----C---CceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC----CCCc
Q psy5751 69 SMANLNDDQPKVIVS-KDL----V---NPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD----LKLP 135 (232)
Q Consensus 69 ~~~~~~g~~~~~~~~-~~~----~---~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~----~~~p 135 (232)
++.+-.|..=+.+.. ... . ....++++|.+ +.+|... . ...|++..-.|..=+.+..... -...
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~--~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-R--TEGIWKSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-S--SSCEEEESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-c--cCCEEEECCCCcccCCCccCccccCCCCCe
Confidence 666544443222221 111 0 23479999865 4555543 1 2447766554544333221100 1223
Q ss_pred ceEEEeCCC-CEEEEEECCCCcEEEEecCCCce-EEEecC-----------C-------CceEEEEEE--CCEEEEEe--
Q psy5751 136 NSLAVDFRT-DELCWVDADSKSLECMTIRNRVR-RKVYSN-----------C-------TYPFGLSIT--DEKYYWTD-- 191 (232)
Q Consensus 136 ~~l~~d~~~-~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~-----------~-------~~p~gla~~--~~~ly~td-- 191 (232)
..|++++.+ +.||++......|++. .|+++. +.+... + ..|..++++ .+.||.+-
T Consensus 172 ~~i~~~p~~~~~~~~~~~~~~~v~~S-~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~ 250 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATAPQGMYVT-HDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYAD 250 (789)
T ss_dssp EEEEECTTSTTCEEEEESSTTCEEEE-SSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEES
T ss_pred EEEEECCCCCCEEEEEEcCCCeEEEE-cCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEec
Confidence 567888754 5888876543567765 454432 332210 1 122666664 78888872
Q ss_pred ------CCCCcEEEEeCCCCCcceEE
Q psy5751 192 ------WKTNRIESANKEGERAPSIA 211 (232)
Q Consensus 192 ------~~~~~i~~~~~~g~~~~~i~ 211 (232)
...+.|++-.-.|...+.+.
T Consensus 251 ~~~p~~g~~g~l~~S~DgG~tW~~~~ 276 (789)
T 1sqj_A 251 YPGPWGVTFGEVWRQNRTSGAWDDIT 276 (789)
T ss_dssp SCSSSCCCCCCEEEEETTTCCEEECC
T ss_pred CCCCCCCCCceEEEEeCCCCceEECc
Confidence 24566777666677666443
No 321
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=74.29 E-value=0.98 Score=36.18 Aligned_cols=176 Identities=11% Similarity=0.040 Sum_probs=71.9
Q ss_pred CCCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEE-EEeecCCeEEEEeCCCCeEEEEeC-CCCCCEEEEeCC-
Q psy5751 10 VEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGL-TFDWVNRVLYWTDSQMDTISMANL-NDDQPKVIVSKD- 85 (232)
Q Consensus 10 ~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl-~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~~- 85 (232)
.++.||++... + .|+.++.. |....+.-.. .+.+. ++. ++.+|++....+.|+..|. +|...... ...
T Consensus 8 ~~~~v~~gs~d-g-~v~a~d~~tG~~~W~~~~~---~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLD-G-SLHAVSKRTGSIKWTLKED---PVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTI 79 (369)
T ss_dssp CTTEEEEEETT-S-EEEEEETTTCCEEEEEECC---CSCCCC-------CCEEECTTTCCEEEC-----CCSEEC-SCCH
T ss_pred eCCEEEEEcCC-C-EEEEEECCCCCEEEEecCC---CceecceEc--CCCEEEEeCCCCEEEEEECCCCceeeee-eccC
Confidence 36788887643 3 68888865 4333333221 12111 222 3557777667788998887 44433221 101
Q ss_pred ----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751 86 ----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT 161 (232)
Q Consensus 86 ----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~ 161 (232)
...| ++. .++.||+... .+.++..+.......-.... +....+.+.++.||++. ..+.|..++
T Consensus 80 ~~~~~~sp---~~~-~~~~v~~g~~---dg~v~a~D~~tG~~~w~~~~-----~~~~~~~p~~~~v~~~~-~dg~v~a~d 146 (369)
T 2hz6_A 80 PELVQASP---CRS-SDGILYMGKK---QDIWYVIDLLTGEKQQTLSS-----AFADSLSPSTSLLYLGR-TEYTITMYD 146 (369)
T ss_dssp HHHHTTCS---CC------CCCCEE---EEEEEEECCC---------------------------EEEEE-EEEEEECCC
T ss_pred ccccccCc---eEe-cCCEEEEEeC---CCEEEEEECCCCcEEEEecC-----CCcccccccCCEEEEEe-cCCEEEEEE
Confidence 1112 121 1456665432 23466666653322111111 11122333567888763 345677777
Q ss_pred cCCCceE-EE-ecCCCceEEEEEEC-----CEEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751 162 IRNRVRR-KV-YSNCTYPFGLSITD-----EKYYWTDWKTNRIESANKE-GERAPSI 210 (232)
Q Consensus 162 ~~g~~~~-~~-~~~~~~p~gla~~~-----~~ly~td~~~~~i~~~~~~-g~~~~~i 210 (232)
.+.++.. .+ .... .+.++.. +.+|++.. .+.|..++.. |+.....
T Consensus 147 ~~tG~~~W~~~~~~~---~~~~~~~~~~~~~~v~~~~~-dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 147 TKTRELRWNATYFDY---AASLPEDDVDYKMSHFVSNG-DGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp SSSSSCCCEEEEEEE---CCBCCCCCTTCCCCEEEEET-SCEEEEECTTTCCEEEEE
T ss_pred CCCCCEEEeEecccc---cCccccCCccccceEEEECC-CCEEEEEECCCCcEEEEe
Confidence 7644321 11 1111 1122222 66777654 4678888875 5544433
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=73.24 E-value=30 Score=26.79 Aligned_cols=187 Identities=12% Similarity=-0.010 Sum_probs=94.6
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCCCEEEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQPKVIV 82 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~ 82 (232)
++.+.. .+.+|++.. .+ .|++-.=.|...+.+.........++++++ .+.+|.... .+.+++.+-. |..=..+-
T Consensus 126 ~i~~~~-~~~~~~~~~-~g-~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 126 LIKALG-NGSAEMITN-VG-AIYRTKDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp EEEEEE-TTEEEEEET-TC-CEEEESSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEE
T ss_pred EEEEEC-CCCEEEEeC-Cc-cEEEEcCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECC
Confidence 455443 466776553 33 576643334454444433334567788876 345554443 4567776544 44333333
Q ss_pred eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCC---CCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADL---KLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~---~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
........++++++ .+.+|.... .+.+++...|+...-..+....+ ....++++++. +.+|.+-. .+.+++
T Consensus 201 ~~~~~~~~~~~~~~-~g~~~~~~~---~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~-~~~~~~g~-~g~i~~ 274 (327)
T 2xbg_A 201 RTTSRRLHNMGFTP-DGRLWMIVN---GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP-NEVWLAGG-AGALLC 274 (327)
T ss_dssp CCSSSCEEEEEECT-TSCEEEEET---TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS-SCEEEEES-TTCEEE
T ss_pred CCCCCccceeEECC-CCCEEEEeC---CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC-CEEEEEeC-CCeEEE
Confidence 22334567888887 577776653 34566654442211110111001 12345666654 67776643 455655
Q ss_pred EecCCCce-EEEecC--C-CceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 160 MTIRNRVR-RKVYSN--C-TYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 160 ~~~~g~~~-~~~~~~--~-~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
. .|++.. +.+... . .....+++. ++. +|+-...+.|.+.+..
T Consensus 275 S-~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~~ 321 (327)
T 2xbg_A 275 S-QDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVTD 321 (327)
T ss_dssp E-SSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECCC
T ss_pred e-CCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcCc
Confidence 4 454433 333222 1 233567764 555 4455556778777653
No 323
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.02 E-value=45 Score=28.73 Aligned_cols=187 Identities=14% Similarity=0.096 Sum_probs=114.1
Q ss_pred CCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEe--ecCCeEEEEeCC-----C-Ce-----------EE-
Q psy5751 11 EGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFD--WVNRVLYWTDSQ-----M-DT-----------IS- 69 (232)
Q Consensus 11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d--~~~~~ly~~d~~-----~-~~-----------I~- 69 (232)
..+||+-|..+. ||.|++++--...+++. ++.....|+++. +.++.+|..... + ++ ++
T Consensus 142 GrylfiNdkan~-RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 142 GKYLFINDKANS-RVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEETTTT-EEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eEEEEEecCCCc-ceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 357777777777 99999999866656654 566788899887 456666654322 1 11 11
Q ss_pred EEeCCCCCC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCC------------cEEEEe---------------CCC
Q psy5751 70 MANLNDDQP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGP------------KIEWSN---------------LDG 120 (232)
Q Consensus 70 ~~~~~g~~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~------------~I~~~~---------------~~g 120 (232)
.+|.+.-.. ++.+.. ++.....++..++.|.+-.+.+.+ -+...+ ++|
T Consensus 221 ~iD~~tm~v~~Qv~v~g---nld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 221 AIDAETMEMAFQVIVDG---NLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEETTTCSEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEcCCccEEEEEEEcCC---ChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 122221111 122222 444566788788888876443311 111111 121
Q ss_pred ---------------CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC-------C---ce-EEEe--c
Q psy5751 121 ---------------TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN-------R---VR-RKVY--S 172 (232)
Q Consensus 121 ---------------~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-------~---~~-~~~~--~ 172 (232)
....-.+.. -..|.|+-++|++.++|.+.-...++..++++. . -+ ...+ +
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~--pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e 375 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPV--PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE 375 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEE--SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB
T ss_pred CCeeEEccccccccCCceEEEEeC--CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc
Confidence 111122222 368999999999999999988889999998872 1 11 1122 2
Q ss_pred CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751 173 NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE 203 (232)
Q Consensus 173 ~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~ 203 (232)
..-.|.-.+++ .|+.|.|-+-...|..-+.+
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred CCCcccEEEECCCCceEeeeeecceEEEEecc
Confidence 45668888997 68999999888888776643
No 324
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=71.55 E-value=53 Score=28.90 Aligned_cols=204 Identities=14% Similarity=0.047 Sum_probs=110.6
Q ss_pred EEEEEeCCC-CEEEEEEcCCCCcEEEEEcCCCceeEEEeC-C-----CCCccEEEEeec-CCeEEEEeCC--------CC
Q psy5751 3 IGITVDCVE-GQVYYSSVADKSSIKRAHLDGKNVEDVITT-N-----IRSPEGLTFDWV-NRVLYWTDSQ--------MD 66 (232)
Q Consensus 3 ~~i~~d~~~-~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~-----~~~p~gl~~d~~-~~~ly~~d~~--------~~ 66 (232)
.+|++++.+ +.+|+.- ... .|+|-.-.|...+.+... . ......|++|+. .+.||++-.. ..
T Consensus 26 ~~i~~~p~~~~~~~~~~-~~g-gv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 26 PGIVFNETEKDLIYARA-AIG-GAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CEEEECSSSTTCEEEEC-SSS-CEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eEEEECCCCCCEEEEEe-cCC-cEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 478999865 5666543 334 689877666665554321 1 234678999973 4688887532 24
Q ss_pred eEEEEeCCCCCCEEEEe-CCC--C-----CceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCC-----
Q psy5751 67 TISMANLNDDQPKVIVS-KDL--V-----NPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADL----- 132 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~-~~~--~-----~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~----- 132 (232)
.|++..-.|..=+.+.. ... . ....|+++|.+ +.||..... ..-|++..-.|..=+.+......
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~--g~gl~~S~DgG~tW~~~~~~~~~~~~~~ 181 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC--GNGLWRSTDYGVTWSKVESFPNPGTYIY 181 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST--TCCEEEESSTTSSCEECTTCCCCCCCBS
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc--CCcEEEeCCCCcceecccCCCCCccccc
Confidence 56666544543233322 111 0 12579999865 677776521 13477655444433322110000
Q ss_pred ----------CCcceEEEeCCC-------CEEEEEECCC-CcEEEEecCCCceEEEecCCC---ceEEEEEE-CCEEEEE
Q psy5751 133 ----------KLPNSLAVDFRT-------DELCWVDADS-KSLECMTIRNRVRRKVYSNCT---YPFGLSIT-DEKYYWT 190 (232)
Q Consensus 133 ----------~~p~~l~~d~~~-------~~Ly~~d~~~-~~i~~~~~~g~~~~~~~~~~~---~p~gla~~-~~~ly~t 190 (232)
..-..+++|+.+ ++||++.... ..|++. .|++..=.....+. .+..+++. .+.||++
T Consensus 182 ~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 182 DPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDGGVTWKAVPGQPKGLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp CTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SSTTSCCEECTTCCCSSEEEEEEECTTSEEEEE
T ss_pred CcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCCCCceEECCCCCCcccceEEEECCCCeEEEE
Confidence 011237787753 4899886443 357665 56554322222222 22334454 7788886
Q ss_pred eC---------CCCcEEEEeCCCCCcceEE
Q psy5751 191 DW---------KTNRIESANKEGERAPSIA 211 (232)
Q Consensus 191 d~---------~~~~i~~~~~~g~~~~~i~ 211 (232)
-. ..+.|++.+..|...+.+.
T Consensus 261 ~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~ 290 (737)
T 2cn3_A 261 YGDTCGPYDGNGKGQVWKFNTRTGEWIDIT 290 (737)
T ss_dssp EESSCCSSCCSCCEEEEEEETTTCCEEECC
T ss_pred ecCCCCccccccCceEEEEeCCCCCEEEcc
Confidence 32 3457888777777776553
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=71.02 E-value=31 Score=26.03 Aligned_cols=206 Identities=14% Similarity=0.104 Sum_probs=112.6
Q ss_pred CCEEEEEEcCCC----CcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCCC-----CeEEEEeCCCCCCEE
Q psy5751 11 EGQVYYSSVADK----SSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQM-----DTISMANLNDDQPKV 80 (232)
Q Consensus 11 ~~~ly~~d~~~~----~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~ 80 (232)
++.||+.--... ..++++++.....+++-... ...-.++++. ++.||+..... ..++++|+....-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 577877632111 25888888766554442211 1112334433 67888864321 357777876544233
Q ss_pred EEeCCCCCc---eEEEEeCCCCeEEEEEcCCC-----CCcEEEEeCCCCCcEEEEEcCCCCCcc---eEEEeCCCCEEEE
Q psy5751 81 IVSKDLVNP---RGIVVHPYYRKLFWSDWNRS-----GPKIEWSNLDGTDREIFLKAADLKLPN---SLAVDFRTDELCW 149 (232)
Q Consensus 81 ~~~~~~~~p---~~iavd~~~~~ly~~d~~~~-----~~~I~~~~~~g~~~~~~~~~~~~~~p~---~l~~d~~~~~Ly~ 149 (232)
+. .+..| .++++. ++.||+...... ...+++.++....-+.+.. +..|. .+++. +++||+
T Consensus 139 ~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~iyv 209 (302)
T 2xn4_A 139 VA--PMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE---MSTRRSGAGVGVL--NNLLYA 209 (302)
T ss_dssp EC--CCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEEE
T ss_pred cC--CCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC---CccccccccEEEE--CCEEEE
Confidence 22 23333 244554 789998742111 3458888877554333321 22221 22222 479998
Q ss_pred EECC-----CCcEEEEecCCCceEEEecCCCc---eEEEEEECCEEEEEeCCC-----CcEEEEeCCCCCcceEEeccCC
Q psy5751 150 VDAD-----SKSLECMTIRNRVRRKVYSNCTY---PFGLSITDEKYYWTDWKT-----NRIESANKEGERAPSIALDMMG 216 (232)
Q Consensus 150 ~d~~-----~~~i~~~~~~g~~~~~~~~~~~~---p~gla~~~~~ly~td~~~-----~~i~~~~~~g~~~~~i~~~~~~ 216 (232)
.-.. ...+++.+++...-+.+.. +.. -.++++.++.||+.-..+ ..+..+++.....+.+..+...
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~ 288 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNAWRQVAD-MNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMST 288 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSS
T ss_pred ECCCCCCcccceEEEEeCCCCCEeeCCC-CCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCc
Confidence 8332 3579999998765454432 222 236667799999985422 4589999987777755322333
Q ss_pred cceeEEEEEEcC
Q psy5751 217 TTYMYGIAAVPS 228 (232)
Q Consensus 217 ~~~p~gi~~~~~ 228 (232)
+..-.++++..+
T Consensus 289 ~r~~~~~~~~~~ 300 (302)
T 2xn4_A 289 GRSYAGVTVIDK 300 (302)
T ss_dssp CCBSCEEEEEEC
T ss_pred ccccceEEEecc
Confidence 444456666643
No 326
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=70.27 E-value=35 Score=26.37 Aligned_cols=191 Identities=8% Similarity=0.013 Sum_probs=98.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCC-CceeEEEeC-CC-CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDG-KNVEDVITT-NI-RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV 80 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-~~~~~~~~~-~~-~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 80 (232)
++.++. +.+|++-. .. .|++ ..++ ...+.+... .+ ..+.+|+... .+.+|.+.. .+.|++..-.|..=..
T Consensus 84 ~i~~~~--~~~~~~g~-~g-~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~S~DgG~tW~~ 156 (327)
T 2xbg_A 84 SVSFQG--NEGWIVGE-PP-IMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMITN-VGAIYRTKDSGKNWQA 156 (327)
T ss_dssp EEEEET--TEEEEEEE-TT-EEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEET-TCCEEEESSTTSSEEE
T ss_pred EEEecC--CeEEEEEC-CC-eEEE-ECCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEeC-CccEEEEcCCCCCCEE
Confidence 567764 66776532 23 5666 5564 333333221 11 3456777654 466776654 4567765444443233
Q ss_pred EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751 81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC 159 (232)
Q Consensus 81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~ 159 (232)
+.........++++++ .+.+|.... .+.+++..-. |..-+.+.... -.....+++++. +.+|.+-. .+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~-~~~~~~~g~---~G~~~~S~d~gG~tW~~~~~~~-~~~~~~~~~~~~-g~~~~~~~-~G~~~~ 229 (327)
T 2xbg_A 157 LVQEAIGVMRNLNRSP-SGEYVAVSS---RGSFYSTWEPGQTAWEPHNRTT-SRRLHNMGFTPD-GRLWMIVN-GGKIAF 229 (327)
T ss_dssp EECSCCCCEEEEEECT-TSCEEEEET---TSSEEEEECTTCSSCEEEECCS-SSCEEEEEECTT-SCEEEEET-TTEEEE
T ss_pred eecCCCcceEEEEEcC-CCcEEEEEC---CCcEEEEeCCCCCceeECCCCC-CCccceeEECCC-CCEEEEeC-CceEEE
Confidence 3332233567888887 566665543 3458877644 44434332222 345567888776 67776543 455666
Q ss_pred EecCCCce-EEEecC-CC---ceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751 160 MTIRNRVR-RKVYSN-CT---YPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSI 210 (232)
Q Consensus 160 ~~~~g~~~-~~~~~~-~~---~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i 210 (232)
...|++.. +.+... +. ....+++. ++.+|.+-. .+.+++ +.| |...+.+
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~-S~DgG~tW~~~ 285 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLC-SQDGGQTWQQD 285 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEE-ESSTTSSCEEC
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEE-eCCCCcccEEc
Confidence 54453321 111111 11 23456554 566777644 355543 445 5555544
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=69.55 E-value=55 Score=28.24 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=87.1
Q ss_pred CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-------C---CCEEEE-e-CCCCCceEEEEeCCCCeEEEEEcCCCC
Q psy5751 43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-------D---QPKVIV-S-KDLVNPRGIVVHPYYRKLFWSDWNRSG 110 (232)
Q Consensus 43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-------~---~~~~~~-~-~~~~~p~~iavd~~~~~ly~~d~~~~~ 110 (232)
.+.|.|+.+++.++.+|++......+.+++.+- + ....+. + +-.-.|.-.++|+ +|..|.+-.- .
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfi--d 398 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFI--D 398 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETT--T
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeee--c
Confidence 479999999999999999999999999998762 1 122222 2 2344899999998 7899988754 4
Q ss_pred CcEEEEeCC-------CCCcEEEEEc-CCCCCcceEEE------eCCCCEEEEEECC------------CCcEEEEecCC
Q psy5751 111 PKIEWSNLD-------GTDREIFLKA-ADLKLPNSLAV------DFRTDELCWVDAD------------SKSLECMTIRN 164 (232)
Q Consensus 111 ~~I~~~~~~-------g~~~~~~~~~-~~~~~p~~l~~------d~~~~~Ly~~d~~------------~~~i~~~~~~g 164 (232)
.+|.+.+++ |.....++.. +-..+|..+.. ++++++|...+-- -..-..++++|
T Consensus 399 SqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp TEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred ceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 567777754 3332223321 11456666644 6776777655421 12346678888
Q ss_pred CceEEEec--CCCceE
Q psy5751 165 RVRRKVYS--NCTYPF 178 (232)
Q Consensus 165 ~~~~~~~~--~~~~p~ 178 (232)
.+.+.++. ....|+
T Consensus 479 dkM~lv~D~P~~~EPH 494 (638)
T 3sbq_A 479 DEMKLVHDGPTFAEPH 494 (638)
T ss_dssp SSCEEEEEEEESSCCC
T ss_pred CceEEEecCCCCCCCc
Confidence 88887765 345554
No 328
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=67.55 E-value=58 Score=27.77 Aligned_cols=97 Identities=5% Similarity=-0.104 Sum_probs=53.0
Q ss_pred EEEEeCCCCeEEEEEcC------------------------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE
Q psy5751 91 GIVVHPYYRKLFWSDWN------------------------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAV 140 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~------------------------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~ 140 (232)
++++||.++.+|+.... ...+.|..+++......--.... . ...+-.+
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~-~~~~g~~ 493 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-L-PLWAGVL 493 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-S-CCCSCCE
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-C-CCcccce
Confidence 67899988999986421 01245666766544332222221 1 1122233
Q ss_pred eCCCCEEEEEECCCCcEEEEecCCCceEEEec----CCCceEEEEE-ECCEEEEEeC
Q psy5751 141 DFRTDELCWVDADSKSLECMTIRNRVRRKVYS----NCTYPFGLSI-TDEKYYWTDW 192 (232)
Q Consensus 141 d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----~~~~p~gla~-~~~~ly~td~ 192 (232)
...++.+|+. ...+.+..++.+.++..--.. ....| +++ .++++|++-.
T Consensus 494 ~tagglvf~g-~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P--~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 494 ATAGNLVFTG-TGDGYFKAFDAKSGKELWKFQTGSGIVSPP--ITWEQDGEQYLGVT 547 (582)
T ss_dssp EETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred EeCCCEEEEE-CCCCcEEEEECCCCCEEEEecCCCCcccCc--eEEEECCEEEEEEE
Confidence 3345788886 456788888887554322221 12234 344 5788888744
No 329
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=62.80 E-value=23 Score=28.45 Aligned_cols=71 Identities=13% Similarity=0.184 Sum_probs=53.0
Q ss_pred CCEEEEEECCCC--cEEEEecCCCceE-EE-ec-----CCCceE-EEEE-ECCEEEEEeCCCCcEEEEeCCCCCcceEEe
Q psy5751 144 TDELCWVDADSK--SLECMTIRNRVRR-KV-YS-----NCTYPF-GLSI-TDEKYYWTDWKTNRIESANKEGERAPSIAL 212 (232)
Q Consensus 144 ~~~Ly~~d~~~~--~i~~~~~~g~~~~-~~-~~-----~~~~p~-gla~-~~~~ly~td~~~~~i~~~~~~g~~~~~i~~ 212 (232)
...||.-+...+ .|..++++..+.. .+ .+ +...+. ++-+ ..+.+|+++.....|..++..|+..+.+.+
T Consensus 39 k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~k~~~ 118 (369)
T 3s9j_A 39 KEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGEIIRNYNF 118 (369)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTTCCEEEEEEC
T ss_pred cEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCCceEEEEEec
Confidence 357888888888 9999999977532 33 33 344453 4544 588999999988899999999999887765
Q ss_pred cc
Q psy5751 213 DM 214 (232)
Q Consensus 213 ~~ 214 (232)
..
T Consensus 119 ~~ 120 (369)
T 3s9j_A 119 QT 120 (369)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 330
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=61.59 E-value=76 Score=27.04 Aligned_cols=77 Identities=9% Similarity=-0.066 Sum_probs=47.5
Q ss_pred eEEEeCCCCEEEEEEC--------------------------------CCCcEEEEecCCCceEEEec-CCCc-eEEEEE
Q psy5751 137 SLAVDFRTDELCWVDA--------------------------------DSKSLECMTIRNRVRRKVYS-NCTY-PFGLSI 182 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~--------------------------------~~~~i~~~~~~g~~~~~~~~-~~~~-p~gla~ 182 (232)
++++|+..+.+|+... ..+.|..+|+..++..--.. .... --.++.
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t 495 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT 495 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe
Confidence 6789998899988642 13568888887554321121 1111 112344
Q ss_pred ECCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751 183 TDEKYYWTDWKTNRIESANKE-GERAPSIALDM 214 (232)
Q Consensus 183 ~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~ 214 (232)
.++.+|+... .+.+..++.. |+.+..++.+.
T Consensus 496 agglvf~g~~-dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 496 AGNLVFTGTG-DGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp TTTEEEEECT-TSEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEECC-CCcEEEEECCCCCEEEEecCCC
Confidence 5788888654 5788888875 67766666554
No 331
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=54.55 E-value=1.2e+02 Score=27.01 Aligned_cols=206 Identities=10% Similarity=0.059 Sum_probs=107.3
Q ss_pred eEEEEEeCCC-CEEEEEEcC-C----CCcEEEEEcCCCceeEEEeC-CC-------CCccEEEEeecC-CeEEEEeCCCC
Q psy5751 2 LIGITVDCVE-GQVYYSSVA-D----KSSIKRAHLDGKNVEDVITT-NI-------RSPEGLTFDWVN-RVLYWTDSQMD 66 (232)
Q Consensus 2 ~~~i~~d~~~-~~ly~~d~~-~----~~~i~~~~~~g~~~~~~~~~-~~-------~~p~gl~~d~~~-~~ly~~d~~~~ 66 (232)
..+|++++.+ +.+|++-.. . . .|++-.=.|...+++... .. .....|++++.. +.+|... ..+
T Consensus 66 i~~ia~dp~~~~~i~~~~g~~~~~~~~-~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~ 143 (789)
T 1sqj_A 66 TESIALDPNNPDRLYLAQGRYVGDEWA-AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTE 143 (789)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTSSCC-EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSS
T ss_pred eeEEEECCCCCCEEEEEeCccCCCccc-EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccC
Confidence 3578888744 567776432 1 3 677654344444444321 10 123579998754 4566543 335
Q ss_pred eEEEEeCCCCCCEEEEe-C----CCCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC---------
Q psy5751 67 TISMANLNDDQPKVIVS-K----DLVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD--------- 131 (232)
Q Consensus 67 ~I~~~~~~g~~~~~~~~-~----~~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~--------- 131 (232)
.|++.+-.|..=+.+.. . .......++++|.+ +.||+..... ..|++..-.|..=+.+.....
T Consensus 144 gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~--~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~ 221 (789)
T 1sqj_A 144 GIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP--QGMYVTHDGGVSWEPVAGQPSSWLNRTTGA 221 (789)
T ss_dssp CEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST--TCEEEESSTTSSCEECTTCCCSCCHHHHHT
T ss_pred CEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC--CeEEEEcCCCcCcccCCCCcCccccccccc
Confidence 67765544443232221 0 11234578888754 5788876431 447765444443332211100
Q ss_pred -------CCCcceEEEeCCCCEEEEEE--------CCCCcEEEEecCCCceEEEecCCC---------------ceEEEE
Q psy5751 132 -------LKLPNSLAVDFRTDELCWVD--------ADSKSLECMTIRNRVRRKVYSNCT---------------YPFGLS 181 (232)
Q Consensus 132 -------~~~p~~l~~d~~~~~Ly~~d--------~~~~~i~~~~~~g~~~~~~~~~~~---------------~p~gla 181 (232)
...|..+++++..+.||.+- ...+.|++..-.|..-+.+..... .-.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~la 301 (789)
T 1sqj_A 222 FPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLS 301 (789)
T ss_dssp STTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEE
T ss_pred cCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEE
Confidence 11237888988668998872 245678887655554343322111 113667
Q ss_pred EE---CCEEEEEeCCC------CcEEEEeCCCCCcceEE
Q psy5751 182 IT---DEKYYWTDWKT------NRIESANKEGERAPSIA 211 (232)
Q Consensus 182 ~~---~~~ly~td~~~------~~i~~~~~~g~~~~~i~ 211 (232)
++ .+.||++-... ..|++=.-.|...+.+.
T Consensus 302 v~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 302 VDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp EETTEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred ECCCCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 74 45688765321 45555444466665443
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=47.99 E-value=88 Score=23.69 Aligned_cols=168 Identities=13% Similarity=0.134 Sum_probs=86.6
Q ss_pred CCEEEEEEcCC---C---CcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCC------CCeEEEEeCCCCC
Q psy5751 11 EGQVYYSSVAD---K---SSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ------MDTISMANLNDDQ 77 (232)
Q Consensus 11 ~~~ly~~d~~~---~---~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~------~~~I~~~~~~g~~ 77 (232)
++.||+.--.. . ..++++++.....+++.... ...-.++++ .++.||+.... .+.++++|+....
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56787764321 1 25778888766554432111 111123334 36889986532 3568888887654
Q ss_pred CEEEEeCCCCCc---eEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCcc---eEEEeCCCCEEE
Q psy5751 78 PKVIVSKDLVNP---RGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLPN---SLAVDFRTDELC 148 (232)
Q Consensus 78 ~~~~~~~~~~~p---~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p~---~l~~d~~~~~Ly 148 (232)
=..+. .+..| .++++. ++.||+...... ...+++.++....-+.+.. +..|. .+++ .+++||
T Consensus 187 W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~--~~~~i~ 257 (318)
T 2woz_A 187 WKDLA--PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE---FPQERSSISLVS--LAGSLY 257 (318)
T ss_dssp EEEEC--CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC---CSSCCBSCEEEE--ETTEEE
T ss_pred EEECC--CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCC---CCCcccceEEEE--ECCEEE
Confidence 22222 23333 245554 789998753211 2346777776554333221 22221 2222 247888
Q ss_pred EEEC--------------CCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEE
Q psy5751 149 WVDA--------------DSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYW 189 (232)
Q Consensus 149 ~~d~--------------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~ 189 (232)
+.-. ....+++.++....=+.+........+.++.++++|+
T Consensus 258 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~~iyi 312 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKEIRYASGASCLATRLNL 312 (318)
T ss_dssp EECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEESCCGGGTTCEEEEEEEEG
T ss_pred EECCeeccCCCCceeccceeeeEEEEeCCCCEehhhcccccccccceeeCCEEEE
Confidence 8721 1356888888765444443222223345556666665
No 333
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=44.44 E-value=1.7e+02 Score=25.87 Aligned_cols=164 Identities=13% Similarity=0.086 Sum_probs=87.2
Q ss_pred CCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCCEEEEe-C----------CCCCceEEEEeCC-CCeEEEEEcC---
Q psy5751 44 RSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQPKVIVS-K----------DLVNPRGIVVHPY-YRKLFWSDWN--- 107 (232)
Q Consensus 44 ~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~----------~~~~p~~iavd~~-~~~ly~~d~~--- 107 (232)
..+.+|++++.+ +.+|+. ...+.|++.+-.|..=+.+.. . .......|++||. .+.+|.+...
T Consensus 21 g~i~~i~~~p~~~~~~y~~-~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYAR-TDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp SCEEEEEECSSSTTCEEEE-ESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CceeEEEeCCCCCCEEEEE-eccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Confidence 477889998866 445554 344567777655543122221 1 2234678999985 3778876532
Q ss_pred -CCCCcEEEEeCCCCCcEEEEEcCCC-----CCc--ceEEEeCCC-CEEEEEECCCCcEEEEecCCCceEEEecCCC---
Q psy5751 108 -RSGPKIEWSNLDGTDREIFLKAADL-----KLP--NSLAVDFRT-DELCWVDADSKSLECMTIRNRVRRKVYSNCT--- 175 (232)
Q Consensus 108 -~~~~~I~~~~~~g~~~~~~~~~~~~-----~~p--~~l~~d~~~-~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~--- 175 (232)
.....|++..-.|..=+.+...... ... ..|++++.+ +.+|... ..+.|++..-.|..=+.+.. +.
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S~DgG~TW~~~~~-~~~~~ 177 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRSTDRAQTWSRMNQ-LPDSS 177 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEESSTTSSCEECTT-SCCCS
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEECCCCcCcccccc-CcccC
Confidence 1235677766555554443321101 011 369999864 6777663 34567766433433233321 11
Q ss_pred ----ceEEEEEE---CCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751 176 ----YPFGLSIT---DEKYYWTDWKTNRIESANKEGERAPSI 210 (232)
Q Consensus 176 ----~p~gla~~---~~~ly~td~~~~~i~~~~~~g~~~~~i 210 (232)
....|+++ .+.+|++-...+.|++-.-.|...+.+
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~tW~~~ 219 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWDGGANWSQV 219 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESSTTCEEEESSSSSSCEEC
T ss_pred CCccceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCCcccc
Confidence 12345553 457888866543454443335655543
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=40.35 E-value=1.2e+02 Score=22.89 Aligned_cols=186 Identities=13% Similarity=0.066 Sum_probs=101.3
Q ss_pred CCEEEEEEcCC-C--CcEEEEEcCCCceeEEEeCCCCCc---cEEEEeecCCeEEEEeCC---------CCeEEEEeCCC
Q psy5751 11 EGQVYYSSVAD-K--SSIKRAHLDGKNVEDVITTNIRSP---EGLTFDWVNRVLYWTDSQ---------MDTISMANLND 75 (232)
Q Consensus 11 ~~~ly~~d~~~-~--~~i~~~~~~g~~~~~~~~~~~~~p---~gl~~d~~~~~ly~~d~~---------~~~I~~~~~~g 75 (232)
++.||+.--.. . ..+.++++.....+++ . .+..+ .++++. ++.||+.... .+.++++|+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~-~-~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL-A-DLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEEC-C-CCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeEC-C-CCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 45566553211 1 2688888876655443 2 22222 233333 6789887432 24688888766
Q ss_pred CCCEEEEeCCCCCc---eEEEEeCCCCeEEEEEcC---CCCCcEEEEeCCCCCcEEEEEcCCCCCc---ceEEEeCCCCE
Q psy5751 76 DQPKVIVSKDLVNP---RGIVVHPYYRKLFWSDWN---RSGPKIEWSNLDGTDREIFLKAADLKLP---NSLAVDFRTDE 146 (232)
Q Consensus 76 ~~~~~~~~~~~~~p---~~iavd~~~~~ly~~d~~---~~~~~I~~~~~~g~~~~~~~~~~~~~~p---~~l~~d~~~~~ 146 (232)
..-..+. .+..| .++++. ++.||+.-.. .....+++.++....-+.+.. +..| ...++. +++
T Consensus 100 ~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~ 170 (308)
T 1zgk_A 100 NQWSPCA--PMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP---MLTRRIGVGVAVL--NRL 170 (308)
T ss_dssp TEEEECC--CCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE--TTE
T ss_pred CeEeECC--CCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCC---CCccccceEEEEE--CCE
Confidence 4322221 22222 244444 7899987421 112457888776543222211 2222 123332 479
Q ss_pred EEEEECC-----CCcEEEEecCCCceEEEecCCCce---EEEEEECCEEEEEeCC-----CCcEEEEeCCCCCcceE
Q psy5751 147 LCWVDAD-----SKSLECMTIRNRVRRKVYSNCTYP---FGLSITDEKYYWTDWK-----TNRIESANKEGERAPSI 210 (232)
Q Consensus 147 Ly~~d~~-----~~~i~~~~~~g~~~~~~~~~~~~p---~gla~~~~~ly~td~~-----~~~i~~~~~~g~~~~~i 210 (232)
||+.-.. ...+++.+++...-+.+. .++.| .++++.++.||+.-.. ...+.++++.....+.+
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCC-CCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 9987321 457899988865444332 22223 3566679999998543 35688999887666644
No 335
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=39.68 E-value=1.9e+02 Score=25.04 Aligned_cols=131 Identities=23% Similarity=0.264 Sum_probs=73.7
Q ss_pred EEEEcCCCceeEEEeCCCCCccEE-EEeecCCeE---EEEeCC-----------CCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 26 KRAHLDGKNVEDVITTNIRSPEGL-TFDWVNRVL---YWTDSQ-----------MDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~p~gl-~~d~~~~~l---y~~d~~-----------~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
....++|...+.+...+.....-| |+|+.++.| +.-+.. ++.+.+.|+||..+..++...
T Consensus 275 ~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs----- 349 (620)
T 2zuy_A 275 GTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA----- 349 (620)
T ss_dssp EEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT-----
T ss_pred eEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEee-----
Confidence 345566665555555444333333 567766532 223432 367999999999877666522
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEcCCCCCcceEE-EeCCCCEEEEEECC---CCcEEEEecC
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKAADLKLPNSLA-VDFRTDELCWVDAD---SKSLECMTIR 163 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~~~~~~p~~l~-~d~~~~~Ly~~d~~---~~~i~~~~~~ 163 (232)
+++|. +|.+.|+........+...+++.. ..+++.-...-..|.|.+ .|...+.++|.-.. .++-+..+++
T Consensus 350 -~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~~~~D~Gr~~~~Did 426 (620)
T 2zuy_A 350 -MAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHAGTDVGRGMAAHID 426 (620)
T ss_dssp -EEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCEEEEECCC
T ss_pred -eEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEecCcccCCceEEEecC
Confidence 68886 566666543222344677777655 456654332123455664 56667788777532 3555555555
No 336
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=37.49 E-value=1.3e+02 Score=22.46 Aligned_cols=190 Identities=16% Similarity=0.114 Sum_probs=106.3
Q ss_pred CCEEEEEEcCCC----CcEEEEEcCCCc---eeEEEeCC-CCCccEEEEeecCCeEEEEeCC-----CCeEEEEeCCCCC
Q psy5751 11 EGQVYYSSVADK----SSIKRAHLDGKN---VEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ-----MDTISMANLNDDQ 77 (232)
Q Consensus 11 ~~~ly~~d~~~~----~~i~~~~~~g~~---~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~ 77 (232)
++.||+.--..+ ..++++++.... .+++.... ...-.++++. ++.||+.... ...++++|+....
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 567887643211 268888988665 54442211 1122233333 6789987532 3568888887654
Q ss_pred CEEEEeCCCC-CceEEEEeCCCCeEEEEEcCC---CCCcEEEEeCCCCCcEEEEEcCCCCCcc---eEEEeCCCCEEEEE
Q psy5751 78 PKVIVSKDLV-NPRGIVVHPYYRKLFWSDWNR---SGPKIEWSNLDGTDREIFLKAADLKLPN---SLAVDFRTDELCWV 150 (232)
Q Consensus 78 ~~~~~~~~~~-~p~~iavd~~~~~ly~~d~~~---~~~~I~~~~~~g~~~~~~~~~~~~~~p~---~l~~d~~~~~Ly~~ 150 (232)
-..+..-... .-.++++. ++.||+.-... ....+++.++....-+.+.. +..|. .+++. +++||+.
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~ 212 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP---MATKRSGAGVALL--NDHIYVV 212 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE--TTEEEEE
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC---CCcccccceEEEE--CCEEEEE
Confidence 3333321111 11244444 78899874321 13568888887654333321 22221 22222 4789988
Q ss_pred ECC-----CCcEEEEecCCCceEEEecCCCce---EEEEEECCEEEEEeCCC-----CcEEEEeCCCCCcceE
Q psy5751 151 DAD-----SKSLECMTIRNRVRRKVYSNCTYP---FGLSITDEKYYWTDWKT-----NRIESANKEGERAPSI 210 (232)
Q Consensus 151 d~~-----~~~i~~~~~~g~~~~~~~~~~~~p---~gla~~~~~ly~td~~~-----~~i~~~~~~g~~~~~i 210 (232)
-.. ...+++.+++...-+.+. .++.| .++++.++.||+.-..+ ..+.++++.....+.+
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSWTTVT-SMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred eCCCCCcccceEEEEeCCCCcEEECC-CCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 432 457999999876555443 22222 36666799999985432 4678888887766655
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=36.00 E-value=1.5e+02 Score=22.80 Aligned_cols=189 Identities=8% Similarity=0.017 Sum_probs=99.6
Q ss_pred CCEEEEEEc-CCCCcEEEEEcCC-CceeEEEeCCCC-Cc---cEEEEeecCCeEEEEeCC----------CCeEEEEeCC
Q psy5751 11 EGQVYYSSV-ADKSSIKRAHLDG-KNVEDVITTNIR-SP---EGLTFDWVNRVLYWTDSQ----------MDTISMANLN 74 (232)
Q Consensus 11 ~~~ly~~d~-~~~~~i~~~~~~g-~~~~~~~~~~~~-~p---~gl~~d~~~~~ly~~d~~----------~~~I~~~~~~ 74 (232)
++.||+.-- ..+ .++++++.. ....+.+.. +. .| .++++. ++.||+.-.. .+.++++|+.
T Consensus 19 ~~~iyv~GG~~~~-~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGT-AWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTT-CEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCC-eEEEEccccCCCCeeECCC-CCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 678888643 234 799999873 222233322 22 22 233333 6789986432 2468888876
Q ss_pred CCCCEEEEeCCCC-Cc---eEEEEeCCCCeEEEEEcCCC-------------------------------------CCcE
Q psy5751 75 DDQPKVIVSKDLV-NP---RGIVVHPYYRKLFWSDWNRS-------------------------------------GPKI 113 (232)
Q Consensus 75 g~~~~~~~~~~~~-~p---~~iavd~~~~~ly~~d~~~~-------------------------------------~~~I 113 (232)
...=..+. .+. .| ..+++. ++.||+.-.... ...+
T Consensus 95 ~~~W~~~~--~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (357)
T 2uvk_A 95 TNSWVKLM--SHAPMGMAGHVTFVH--NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL 170 (357)
T ss_dssp TTEEEECS--CCCSSCCSSEEEEEE--TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE
T ss_pred CCcEEECC--CCCCcccccceEEEE--CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE
Confidence 54322221 222 22 234443 789998764211 2468
Q ss_pred EEEeCCCCCcEEEEEcCCCCCc--ceEEEeCCCCEEEEEEC------CCCcEEEEecC--CCceEEEecCCCce-----E
Q psy5751 114 EWSNLDGTDREIFLKAADLKLP--NSLAVDFRTDELCWVDA------DSKSLECMTIR--NRVRRKVYSNCTYP-----F 178 (232)
Q Consensus 114 ~~~~~~g~~~~~~~~~~~~~~p--~~l~~d~~~~~Ly~~d~------~~~~i~~~~~~--g~~~~~~~~~~~~p-----~ 178 (232)
++.++....=+.+.... ...- .++++. +++||+.-. ....+++.+++ ...-+.+ ..+..| .
T Consensus 171 ~~yd~~~~~W~~~~~~p-~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~-~~~~~~~~~~~~ 246 (357)
T 2uvk_A 171 LSFDPSTQQWSYAGESP-WYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL-APVSSPDGVAGG 246 (357)
T ss_dssp EEEETTTTEEEEEEECS-SCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEEC-CCSSTTTCCBSC
T ss_pred EEEeCCCCcEEECCCCC-CCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEec-CCCCCCcccccc
Confidence 88888765444443322 1111 233333 578998732 14568888774 2222222 222222 2
Q ss_pred EEEEECCEEEEEeCCC----------------------CcEEEEeCCCCCcceEE
Q psy5751 179 GLSITDEKYYWTDWKT----------------------NRIESANKEGERAPSIA 211 (232)
Q Consensus 179 gla~~~~~ly~td~~~----------------------~~i~~~~~~g~~~~~i~ 211 (232)
.+++.++.||+.-..+ ..+.++++.....+.+.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 4667899999975421 25778888877777653
No 338
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=31.94 E-value=2.6e+02 Score=24.46 Aligned_cols=119 Identities=13% Similarity=0.053 Sum_probs=67.8
Q ss_pred CccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCCEEEEeC-C-----CCCceEEEEeCC-CCeEEEEEcC------CCC
Q psy5751 45 SPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQPKVIVSK-D-----LVNPRGIVVHPY-YRKLFWSDWN------RSG 110 (232)
Q Consensus 45 ~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~-----~~~p~~iavd~~-~~~ly~~d~~------~~~ 110 (232)
.+.+|++++.+ +.||+ -...+.|++.+-.|..=+.+... . ......|++||. .+.||++... ...
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEE-EecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 78899999865 45665 44446788887666542333221 1 123568999984 4788887531 113
Q ss_pred CcEEEEeCCCCCcEEEEEcCCCC-------CcceEEEeCCC-CEEEEEECCCCcEEEEecCC
Q psy5751 111 PKIEWSNLDGTDREIFLKAADLK-------LPNSLAVDFRT-DELCWVDADSKSLECMTIRN 164 (232)
Q Consensus 111 ~~I~~~~~~g~~~~~~~~~~~~~-------~p~~l~~d~~~-~~Ly~~d~~~~~i~~~~~~g 164 (232)
..|++..-.|..=+.+....... ....|++|+.+ +.||........|++..-.|
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG 164 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYG 164 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTT
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCC
Confidence 46777665555544433221010 12579999864 67777642224577654334
No 339
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=29.88 E-value=1.8e+02 Score=21.84 Aligned_cols=187 Identities=10% Similarity=0.100 Sum_probs=103.0
Q ss_pred CCEEEEEEcC---------CCCcEEEEEcCCCceeEEEeCCC-CCccEEEEeecCCeEEEEeCC-----CCeEEEEeCCC
Q psy5751 11 EGQVYYSSVA---------DKSSIKRAHLDGKNVEDVITTNI-RSPEGLTFDWVNRVLYWTDSQ-----MDTISMANLND 75 (232)
Q Consensus 11 ~~~ly~~d~~---------~~~~i~~~~~~g~~~~~~~~~~~-~~p~gl~~d~~~~~ly~~d~~-----~~~I~~~~~~g 75 (232)
++.||+.--. .+ .++++++.....+++-.... ..-.++++. ++.||+.... ...++++|+..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~-~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSS-ALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECC-CEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecc-eEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 5677776322 12 58888887665433321111 111233333 6789987432 35688888765
Q ss_pred CCCEEEEeCCCCCc---eEEEEeCCCCeEEEEEcCC---CCCcEEEEeCCCCCcEEEEEcCCCCCc---ceEEEeCCCCE
Q psy5751 76 DQPKVIVSKDLVNP---RGIVVHPYYRKLFWSDWNR---SGPKIEWSNLDGTDREIFLKAADLKLP---NSLAVDFRTDE 146 (232)
Q Consensus 76 ~~~~~~~~~~~~~p---~~iavd~~~~~ly~~d~~~---~~~~I~~~~~~g~~~~~~~~~~~~~~p---~~l~~d~~~~~ 146 (232)
..-..+. .+..| ...++. ++.||+.-... ....+++.++....-+.+.. +..| .++++. +++
T Consensus 147 ~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~--~~~ 217 (308)
T 1zgk_A 147 DEWHLVA--PMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA---MNTIRSGAGVCVL--HNC 217 (308)
T ss_dssp TEEEECC--CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE--TTE
T ss_pred CeEeECC--CCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC---CCCccccceEEEE--CCE
Confidence 4322221 22222 244554 78999874321 13468888876543332211 2222 123333 478
Q ss_pred EEEEECC-----CCcEEEEecCCCceEEEecCCCce---EEEEEECCEEEEEeCC-----CCcEEEEeCCCCCcceE
Q psy5751 147 LCWVDAD-----SKSLECMTIRNRVRRKVYSNCTYP---FGLSITDEKYYWTDWK-----TNRIESANKEGERAPSI 210 (232)
Q Consensus 147 Ly~~d~~-----~~~i~~~~~~g~~~~~~~~~~~~p---~gla~~~~~ly~td~~-----~~~i~~~~~~g~~~~~i 210 (232)
||+.-.. ...+++.+++...-+.+. .++.| .++++.+++||+.-.. ...+..+++.....+.+
T Consensus 218 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 218 IYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCCccceEEEEeCCCCcEEECC-CCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 9988432 367999998866444432 23332 3666778999998442 35678888887777655
No 340
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.41 E-value=2.9e+02 Score=24.23 Aligned_cols=116 Identities=9% Similarity=0.079 Sum_probs=65.1
Q ss_pred eecCCeEEEEe----------CCCCeEEEEeCCCC--------CCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCc
Q psy5751 52 DWVNRVLYWTD----------SQMDTISMANLNDD--------QPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPK 112 (232)
Q Consensus 52 d~~~~~ly~~d----------~~~~~I~~~~~~g~--------~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~ 112 (232)
+...+.+|+.- ..+++|..+++++. ..+.++. .....+.+++.. .+.|+++.......+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~~~~~~~~~ 373 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT--KDRVFLATYDNVVAK 373 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC--SSCEEEEEEETTEEE
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE--CCEEEEEEEECCEEE
Confidence 44477888732 24678999998762 2344443 333455677776 567777765434557
Q ss_pred EEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECC---CCcEEEEecCCCceEEE
Q psy5751 113 IEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDAD---SKSLECMTIRNRVRRKV 170 (232)
Q Consensus 113 I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~---~~~i~~~~~~g~~~~~~ 170 (232)
+.+.++.+.. .+.++..+......+..++++++.++++-+. -..++.+++. +..+.+
T Consensus 374 l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l 435 (711)
T 4hvt_A 374 VVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKII 435 (711)
T ss_dssp EEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEE
T ss_pred EEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEE
Confidence 8888775432 2221211102233445555666666665332 4578888887 444444
No 341
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=28.97 E-value=2.8e+02 Score=23.84 Aligned_cols=132 Identities=20% Similarity=0.240 Sum_probs=76.0
Q ss_pred EEEEcCCCceeEEEeCCCCCc-cEEEEeecCCeE--EE-EeCC-----------CCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751 26 KRAHLDGKNVEDVITTNIRSP-EGLTFDWVNRVL--YW-TDSQ-----------MDTISMANLNDDQPKVIVSKDLVNPR 90 (232)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~p-~gl~~d~~~~~l--y~-~d~~-----------~~~I~~~~~~g~~~~~~~~~~~~~p~ 90 (232)
....++|...+.+...+.... .=.|+|+.++.| -| .|.. ++.+.+.|+||..+..++...
T Consensus 271 ~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs----- 345 (591)
T 2zux_A 271 GIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS----- 345 (591)
T ss_dssp EEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT-----
T ss_pred eEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEee-----
Confidence 345566665444444332222 224567767654 33 3332 368999999999887666522
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEcCCCCCcceEE-EeCCCCEEEEEECC---CCcEEEEecCC
Q psy5751 91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKAADLKLPNSLA-VDFRTDELCWVDAD---SKSLECMTIRN 164 (232)
Q Consensus 91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~~~~~~p~~l~-~d~~~~~Ly~~d~~---~~~i~~~~~~g 164 (232)
+++|. +|.+.|+........+...+++.. ..+++.-...-..|.|.+ .|...+.++|.-.. .++-+..+++.
T Consensus 346 -~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp 423 (591)
T 2zux_A 346 -MAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDP 423 (591)
T ss_dssp -EEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCT
T ss_pred -eEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCC
Confidence 57886 666666653323345677777765 356665443123455664 56666788777543 35666666653
No 342
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=28.88 E-value=1.8e+02 Score=21.58 Aligned_cols=175 Identities=9% Similarity=0.045 Sum_probs=100.8
Q ss_pred cEEEEEcCCCceeEEEeCCCCCc---cEEEEeecCCeEEEEeCC-----CCeEEEEeCCCCC---CEEEEeCCCCCc---
Q psy5751 24 SIKRAHLDGKNVEDVITTNIRSP---EGLTFDWVNRVLYWTDSQ-----MDTISMANLNDDQ---PKVIVSKDLVNP--- 89 (232)
Q Consensus 24 ~i~~~~~~g~~~~~~~~~~~~~p---~gl~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~---~~~~~~~~~~~p--- 89 (232)
.++++++.......+- .+..+ .++++ .++.||+.... ...++++|+.... -+.+. .+..|
T Consensus 32 ~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~--~~p~~r~~ 105 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLP--SITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA--PMNVRRGL 105 (301)
T ss_dssp CEEEEETTTTEEEECC--CCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC--CCSSCCBS
T ss_pred EEEEEcCCCCeEEeCC--CCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC--CCCCCccc
Confidence 6888888766543332 12222 23333 36789887532 3578899987665 34442 22222
Q ss_pred eEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCC-CCCcceEEEeCCCCEEEEEEC-----CCCcEEEE
Q psy5751 90 RGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAAD-LKLPNSLAVDFRTDELCWVDA-----DSKSLECM 160 (232)
Q Consensus 90 ~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~-~~~p~~l~~d~~~~~Ly~~d~-----~~~~i~~~ 160 (232)
.++++. ++.||+.-.... ...+++.++....-+.+..... ...+ +.++. +++||+.-. ....+++.
T Consensus 106 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 106 AGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVVA--SGVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEEE--TTEEEEECCBCSSCBCCCEEEE
T ss_pred eeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEEE--CCEEEEECCCCCCcccceEEEE
Confidence 244444 789998853211 3468888887655444433220 1122 22222 478998732 24679999
Q ss_pred ecCCCceEEEecCCCce---EEEEEECCEEEEEeCC-----CCcEEEEeCCCCCcceE
Q psy5751 161 TIRNRVRRKVYSNCTYP---FGLSITDEKYYWTDWK-----TNRIESANKEGERAPSI 210 (232)
Q Consensus 161 ~~~g~~~~~~~~~~~~p---~gla~~~~~ly~td~~-----~~~i~~~~~~g~~~~~i 210 (232)
++....-+.+. .++.| .+++..+++||+.-.. ...+..+++.....+.+
T Consensus 181 d~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 181 DPHTGHWTNVT-PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp ETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred eCCCCcEEeCC-CCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 98876555443 23333 3566678999998543 35688888887766655
No 343
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=27.48 E-value=1.1e+02 Score=24.04 Aligned_cols=63 Identities=11% Similarity=0.061 Sum_probs=31.2
Q ss_pred CCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEE-EEECCEEEEEeCCCCcEEEEeCC-CCCcc
Q psy5751 144 TDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL-SITDEKYYWTDWKTNRIESANKE-GERAP 208 (232)
Q Consensus 144 ~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gl-a~~~~~ly~td~~~~~i~~~~~~-g~~~~ 208 (232)
++.||++. ..+.|..++...++..--.+. ....+. ++.++.+|++....+.|+.++.. |+...
T Consensus 9 ~~~v~~gs-~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 9 ETLLFVST-LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT 73 (369)
T ss_dssp TTEEEEEE-TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSE
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee
Confidence 46777774 356788888665443322221 111111 23566678876677888888874 55543
No 344
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=25.84 E-value=2.5e+02 Score=22.35 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=43.9
Q ss_pred eEEEEEcCCCCC--cEEEEeCCCCCcEEEEEcCCCCCcceE-----EEe-CCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751 100 KLFWSDWNRSGP--KIEWSNLDGTDREIFLKAADLKLPNSL-----AVD-FRTDELCWVDADSKSLECMTIRNRVRRKV 170 (232)
Q Consensus 100 ~ly~~d~~~~~~--~I~~~~~~g~~~~~~~~~~~~~~p~~l-----~~d-~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~ 170 (232)
.||..+.. .+ .|..++|+.....--+.-. -..|+|+ .+. ...+.+|+++....+|..++..|.....+
T Consensus 41 yL~~~N~~--~~~~~i~~iDL~~~kl~k~i~~e-kEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~k~ 116 (369)
T 3s9j_A 41 YLHFENTQ--KSLYDIVIFDIENQQIAKRIPLH-KTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGEIIRNY 116 (369)
T ss_dssp EEEEEECS--TTCCEEEEEETTTTEEEEEEECB-SSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTTCCEEEEE
T ss_pred EEEEeCCC--CCcCcEEEEECCCCceeeeeccc-cCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCCceEEEEE
Confidence 55555543 44 8999999977644222222 3456553 121 23478888888888899999999877665
No 345
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=23.91 E-value=3.7e+02 Score=23.57 Aligned_cols=154 Identities=10% Similarity=-0.027 Sum_probs=79.6
Q ss_pred cEEEEeecC-CeEEEEeCC-----CCeEEEEeCCCCCCEEEEeCCCCCc-eEEEEeCCC-CeEEEEEcCCCCCcEEEEeC
Q psy5751 47 EGLTFDWVN-RVLYWTDSQ-----MDTISMANLNDDQPKVIVSKDLVNP-RGIVVHPYY-RKLFWSDWNRSGPKIEWSNL 118 (232)
Q Consensus 47 ~gl~~d~~~-~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~p-~~iavd~~~-~~ly~~d~~~~~~~I~~~~~ 118 (232)
..|++|+.+ +.+|++-.. .+.|++.+-.|..=+.+.. .. .| ..|+++|.+ +.||+... .+.+++..-
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~-p~-~~~~~l~~~P~~~~~l~a~~~---~~gly~S~D 167 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDL-PF-HPLTQMMYSPQNSDYLLALST---ENGLWVSKN 167 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEEC-SS-CBSSCCEEETTEEEEEEEEBT---TCCEEEESS
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccC-CC-CCceEEEEecCCCCEEEEEEC---CCCEEEEeC
Confidence 579999854 378888642 4567766555543333321 22 23 368899865 45666542 345887554
Q ss_pred CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-------Cc--EEEEecCCCceEEEecCCCceEEEEEECCEEEE
Q psy5751 119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-------KS--LECMTIRNRVRRKVYSNCTYPFGLSITDEKYYW 189 (232)
Q Consensus 119 ~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-------~~--i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~ 189 (232)
.|..=+.+ ... .....+... +.+|+..... ++ +.+.+--|...+.+. ....++++.+++|++
T Consensus 168 gG~TW~~i-~~~----v~~~~f~~~-~~Iy~~~~~~~~~~~~~g~l~L~~S~D~g~t~~~l~---~~i~~f~~~~~yl~v 238 (685)
T 3f6k_A 168 FGGKWEEI-HKA----VCLAKWGSD-NTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIG---VKIYSFGLGGRFLFA 238 (685)
T ss_dssp TTSSEEEE-ESS----EEEEEECST-TCEEEEECSSSCTTTTTTSEEEEEESSTTSSCEEEE---EEEEEEEEETTEEEE
T ss_pred CCCCcEEe-ecC----ccccccCCC-CeEEEEeeccccccCCCCceEEEEecCCCCCceEee---ccceeeeeeeeEEEE
Confidence 44443333 322 123345543 5777764322 12 222222233333332 223567778889988
Q ss_pred EeCCC---CcEEEEeCC-CCCcceEEecc
Q psy5751 190 TDWKT---NRIESANKE-GERAPSIALDM 214 (232)
Q Consensus 190 td~~~---~~i~~~~~~-g~~~~~i~~~~ 214 (232)
+.... .....++.+ |.......+|.
T Consensus 239 a~~~~~g~~~~l~VS~D~G~tf~~a~fP~ 267 (685)
T 3f6k_A 239 SVMADKDTTRRIHVSTDQGDTWSMAQLPS 267 (685)
T ss_dssp EEECTTSSCEEEEEESSTTSSCEECBSCC
T ss_pred EEecCCCceEEEEEECcCCcceeEeeCCC
Confidence 75322 233446666 55444455543
No 346
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=23.43 E-value=3.5e+02 Score=23.09 Aligned_cols=221 Identities=8% Similarity=-0.001 Sum_probs=0.0
Q ss_pred EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC------CCCeEEEEeCCCCC
Q psy5751 4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS------QMDTISMANLNDDQ 77 (232)
Q Consensus 4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~------~~~~I~~~~~~g~~ 77 (232)
+.++.. ++.||+.--.....+.++++......++..-....-.--+.-..+++||+... ....+.++|+....
T Consensus 247 ~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 247 GISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred cccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Q ss_pred CEEE-----EeCCCCCceEEEEeCCCCeEEEEEcCC-------CCCcEEEEeCCCCCcEEEEEcCCCC---------Ccc
Q psy5751 78 PKVI-----VSKDLVNPRGIVVHPYYRKLFWSDWNR-------SGPKIEWSNLDGTDREIFLKAADLK---------LPN 136 (232)
Q Consensus 78 ~~~~-----~~~~~~~p~~iavd~~~~~ly~~d~~~-------~~~~I~~~~~~g~~~~~~~~~~~~~---------~p~ 136 (232)
-..+ ..-...+-.+++.. ++.+|+..... ....+++.+.....-....... .. ...
T Consensus 326 W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~-~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTADKQGLYRS--DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR-QSNRGVAPDAMCGN 402 (656)
T ss_dssp EEEETTSCSGGGCCCCTTGGGTT--TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEEC-EETTEECCCCBTCE
T ss_pred ceeCCCccccccccccccceeec--CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcc-ccccccCCCCCCCc
Q ss_pred eEEEeCCCCEEEEEECCCC-----------cEEEEecCCCceEEEe-cCCCceE---EEEEE-CCEEEEEeCCC------
Q psy5751 137 SLAVDFRTDELCWVDADSK-----------SLECMTIRNRVRRKVY-SNCTYPF---GLSIT-DEKYYWTDWKT------ 194 (232)
Q Consensus 137 ~l~~d~~~~~Ly~~d~~~~-----------~i~~~~~~g~~~~~~~-~~~~~p~---gla~~-~~~ly~td~~~------ 194 (232)
.+.++..+++||+.=.... .|++.+++...-..+. ..+..+. +.++. +++||+.-...
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Q ss_pred -----CcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751 195 -----NRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS 229 (232)
Q Consensus 195 -----~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~ 229 (232)
..+..+++.....+.+. +...+..-++.++..+.
T Consensus 483 ~~~~~~~v~~ydp~t~~W~~~~-~~~~~R~~hs~a~ll~d 521 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDTFYKQN-PNSIVRVYHSISLLLPD 521 (656)
T ss_dssp CCSBCCCCEEEEGGGTEEEECC-CCSSCCCTTEEEEECTT
T ss_pred CCCcccceEEEcCCCCceeecC-CCCCccccccHhhcCCC
Done!