BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5756
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65353|RL5_HELAN 60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1
Length = 297
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/227 (82%), Positives = 214/227 (94%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKRYQVKFKRRREGKTDY+ARKRLI QDKNKYNTPKYRL+VRFSN+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQVAYSRIEGD I+C+AY+HELP+YG+KVGLTNYAAAY TGLLLAR+LL L LD+LY+
Sbjct: 61 TCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYI 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G TEVTGEEF+V+ V+ GPGAFRCYLDVGLM+T+TGA+VFGAMKGAVDGGLNI HS KRF
Sbjct: 121 GSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PG+D+ESK+FNA++HR+HIFG HVAEYMRQL+EEDDEA+KRQFS+ +
Sbjct: 181 PGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYI 227
>sp|Q5XUC7|RL5_TOXCI 60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1
Length = 300
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/227 (82%), Positives = 206/227 (90%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKY+TPKYRLIVRFSN+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYDTPKYRLIVRFSNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQVA+SRIEGD I+C+AYSHELPKYG+KVGLTNYAAAY TGLL+ARRLLK L LDRLY
Sbjct: 61 TCQVAHSRIEGDKIVCAAYSHELPKYGVKVGLTNYAAAYCTGLLVARRLLKKLGLDRLYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G E GEE+ VE D+GP AFRC LDVGLMKTSTGA+VFGAMKGAVDGG NIPHSVKRF
Sbjct: 121 GLKEANGEEYYVEPADEGPNAFRCNLDVGLMKTSTGARVFGAMKGAVDGGFNIPHSVKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD E+K+++AE HRKHI GLHVAEYMR+L EED++AF RQFS+ +
Sbjct: 181 PGYDAEAKEYSAETHRKHILGLHVAEYMRKLEEEDEDAFNRQFSQYI 227
>sp|Q9W5R8|RL5_DROME 60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=2
SV=2
Length = 299
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/224 (81%), Positives = 203/224 (90%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVR SNKDI
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
T Q+AY+RIEGD ++C+AYSHELPKYGI+VGLTNYAAAY TGLL+ARR+L L LD LY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
GCTEVTGEEF+VE VD GPGAFRC+LDVGL +T+TGA+VFGAMKGAVDGGLNIPHSVKRF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
PGY E+K FNA++HR HIFG HVA+YMR L EED+E+FKRQFS
Sbjct: 181 PGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFS 224
>sp|Q56FG6|RL5_LYSTE 60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2
SV=1
Length = 297
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/227 (79%), Positives = 202/227 (88%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKR+QVK+KRRREGKTDYYARKRL VQDK+KYNTPKYRLIVR SNKDI
Sbjct: 1 MGFVKVVKNKQYFKRFQVKYKRRREGKTDYYARKRLTVQDKSKYNTPKYRLIVRLSNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQ+AYSRIEGD I+C+AYSHELPKYGIKVGLTNYAAAY TGLLLARRLLK L LD LY
Sbjct: 61 TCQIAYSRIEGDRIVCAAYSHELPKYGIKVGLTNYAAAYCTGLLLARRLLKQLKLDTLYT 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G TEV G+E++VE D GPGAFRCYLD GLM+T+TGA++FGAMKGAVDGGLNIPHS KRF
Sbjct: 121 GTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYDNESK FNA++HR+HIF H+A YM+ L E + E F+RQFS+ +
Sbjct: 181 PGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYI 227
>sp|O76190|RL5_BOMMO 60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1
Length = 299
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/246 (76%), Positives = 218/246 (88%), Gaps = 8/246 (3%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQVAYSRIEGDHI+C+AYSHELP+YG+KVGLTNYAAAY+TGLLLARRLL+ L LD LY
Sbjct: 61 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYT 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G T+VTG+E++VE VD GPGAFRCYLDVGL +T+TG +VFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGAVDGGLNVPHSIKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVGGWGTLSEQLGMT 284
PGYD ESK FNAE+HR HIFGLHVAEYMR L ++D+++FKRQFS+ + +LG+T
Sbjct: 181 PGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYI--------KLGVT 232
Query: 285 KSSFKC 290
+ +
Sbjct: 233 ADAIEA 238
>sp|Q1HQU2|RL5_AEDAE 60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1
Length = 297
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/228 (79%), Positives = 207/228 (90%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRLI QDKNKYNTPKYRLIVR SN+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKYRLIVRLSNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQ+AY+RIEGD I+C+AYSHELP+YG+KVGLTNYAAAY TGLL+ARR+L+ L LD LY
Sbjct: 61 TCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYT 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
GCT+VTGEE+ VE VD GPGAFRCYLDVGL +T+TGA++FGAMKGAVDGGLNIPHSVKRF
Sbjct: 121 GCTDVTGEEYLVEPVDDGPGAFRCYLDVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVG 272
PGY E+K FNAE+HR HIFG HVA+YMR L EED++A+KRQFS+ +
Sbjct: 181 PGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEEDEDAYKRQFSKYIA 228
>sp|O44248|RL5_ANOGA 60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3
Length = 325
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/227 (80%), Positives = 207/227 (91%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRLI QDKNKYNTPK+RLIVR SN+DI
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQ+AY+RIEGD I+C+AYSHELP+YG+KVGLTNYAAAY TGLL+ARR+L+ L LD LY
Sbjct: 61 TCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
GCT+VTGEE+ VE VD+GP AFRCYLDVGL +T+TGA+VFGAMKGAVDGGLNIPHSVKRF
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGY E+K FNAE+HR HIFGLHVA YMR L EED+EAFKRQFS+ +
Sbjct: 181 PGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYI 227
>sp|P22451|RL5_CHICK 60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2
Length = 297
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 171/227 (75%), Positives = 203/227 (89%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL LD++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EVTG+E++VESVD PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ESK+FNAE+HRKHI G +VA+YMR L EED++A+K+QFS+ +
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYI 227
>sp|P15126|RL5B_XENLA 60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-b PE=2 SV=2
Length = 296
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 207/237 (87%), Gaps = 1/237 (0%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL LD++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EVTG+E++VESVD PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVGGWGTLSEQL 281
PGYD+ESK+FN E+HRKHIF ++AEYMR L EED++A+K+QFS+ + G ++QL
Sbjct: 181 PGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKN-GVAADQL 236
>sp|P15125|RL5A_XENLA 60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-a PE=2 SV=2
Length = 296
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 207/237 (87%), Gaps = 1/237 (0%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYGIKVGLTNYAAAY TGLLLARRLL LD++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EVTG+E++VES+D PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVGGWGTLSEQL 281
PGYD+ESK+FN E+HRKHIF +VAEYMR L EED++A+K+QFS+ + G ++Q+
Sbjct: 181 PGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKN-GVTADQV 236
>sp|Q26481|RL5_STYCL 60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3
Length = 295
Score = 361 bits (927), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 171/227 (75%), Positives = 201/227 (88%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVK+KRRR+GKTDY+ARKRL+VQDKNKYNTPKYR+IVRF+NKDI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD +IC+AY+HELP+YG+KVGLTNYAAAY TGLLL+RRLL LD +Y
Sbjct: 61 VCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G TE+ G+EF VE VD PGAFR +LDVGL +T+TGAKVFGAMKGA DGGL+IPHS KRF
Sbjct: 121 GQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ES DF+AE+HR HIFG HV+ YM++L EED+EAFKRQFS+ +
Sbjct: 181 PGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYI 227
>sp|P46777|RL5_HUMAN 60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3
Length = 297
Score = 357 bits (916), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 203/227 (89%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL +D++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EVTG+E++VES+D PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ESK+FNAE+HRKHI G +VA+YMR L EED++A+K+QFS+ +
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYI 227
>sp|Q4R5M0|RL5_MACFA 60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3
Length = 297
Score = 355 bits (911), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 168/227 (74%), Positives = 203/227 (89%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+H+LPKYG+KVGLTNYAAAY TGLLLARRLL +D++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EVTG+E++VES+D PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ESK+FNAE+HRKHI G +VA+YMR L EED++A+K+QFS+ +
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYI 227
>sp|Q58DW5|RL5_BOVIN 60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3
Length = 297
Score = 355 bits (910), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 168/227 (74%), Positives = 203/227 (89%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL +D++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EVTG+E++VES+D PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ESK+F+AE+HRKHI G +VA+YMR L EED++A+K+QFS+ +
Sbjct: 181 PGYDSESKEFSAEVHRKHIMGQNVADYMRYLIEEDEDAYKKQFSQYI 227
>sp|P09895|RL5_RAT 60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3
Length = 297
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/227 (73%), Positives = 202/227 (88%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQV+F+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL +D++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EV G+E++VES+D PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ESK+FNAE+HRKHI G +VA+YMR L EED++A+K+QFS+ +
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYI 227
>sp|P47962|RL5_MOUSE 60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3
Length = 297
Score = 341 bits (874), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 167/227 (73%), Positives = 201/227 (88%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQV+F+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL +D++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EV G E++VES+D PGAF CYLD GL +T+TG KVFGA+KGAVDGGL+IPHS KRF
Sbjct: 121 GQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
PGYD+ESK+FNAE+HRKHI G +VA+YMR L EED++A+K+QFS+ +
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYI 227
>sp|Q627R7|RL5_CAEBR 60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3
SV=2
Length = 294
Score = 324 bits (831), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 152/226 (67%), Positives = 182/226 (80%), Gaps = 3/226 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MG VKV+KNK YFKRYQVK KRRREGKTDYYARKRL VQDKNKYNTPKYRLIVR +NKDI
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
Q+AYS+IEGD ++ SAY+HELP+YG+K GLTNYAAAYATGLLLARR LK + LD Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYK 120
Query: 165 GCTEVTGEEFSVESV-DKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKR 223
G E+TGE+++VE D+ P F+ LD+GL +T+TG+K+F MKG DGG+N+PHS R
Sbjct: 121 GHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESR 178
Query: 224 FPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
F G+D ESKD+NAE HR I G HVA+YM L EED++ +KRQFS+
Sbjct: 179 FFGFDQESKDYNAEAHRDRILGKHVADYMSLLKEEDEDRYKRQFSK 224
>sp|P49405|RL5_CAEEL 60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=3
SV=1
Length = 293
Score = 324 bits (830), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 151/226 (66%), Positives = 183/226 (80%), Gaps = 3/226 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR +NKD+
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
Q+AYS+IEGD ++ SAYSHELP+YG+KVGLTNYAAAYATGLLLARR LK + LD Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 165 GCTEVTGEEFSVESV-DKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKR 223
G E+TGE+++VE D+ P F+ LD+GL +T+TG+K+F MKG DGG+N+PHS R
Sbjct: 121 GHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESR 178
Query: 224 FPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
F G+D ESK++NAE HR I G HVA+YM L EED++ +KRQFS+
Sbjct: 179 FFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSK 224
>sp|Q4KTI3|RL5_SUBDO 60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1
Length = 293
Score = 320 bits (821), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 182/224 (81%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M FVKV+KNK YFKRYQVKF+RRREGKTDY ARKRL+VQDKNKYNTPKYR+++RF+N DI
Sbjct: 1 MPFVKVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+ Y++IEGD ++ SAY+HELP+YG+KVGLTNYAAAY TGLLLARRLL NL L Y
Sbjct: 61 ICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYA 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G T++ GE+F+VE + GP FR +LDVGL +T+TG +VF AMKGAVDGG++IPHS RF
Sbjct: 121 GQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
GYD ES A+ R++IFG HV++YM+ L EED+E +K FS
Sbjct: 181 VGYDEESSQLEADKLRQYIFGGHVSDYMKYLQEEDEEKYKAHFS 224
>sp|Q6UNT2|RL5_CUCSA 60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1
Length = 302
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/242 (61%), Positives = 178/242 (73%), Gaps = 3/242 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F K K K YFKRYQVKFKRRREGKTDY AR RLI QDKNKYNTPKYR +VR SNKDI
Sbjct: 1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
T Q+ + I GD ++ SAYSHELP+YG++VGLTNYAAAY TGLLLARR+LK L +D Y
Sbjct: 61 TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120
Query: 165 GCTEVTGEEFSVESVD-KGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKR 223
G E TGE++SVE D + P FR LDVGL++T+TG +VFGA+KGA+DGGL+IPHS KR
Sbjct: 121 GNVEATGEDYSVEPADTRRP--FRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKR 178
Query: 224 FPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVGGWGTLSEQLGM 283
F GY + + E+HRK+IFG HVA YMR L E++ E ++ FSE + E G+
Sbjct: 179 FAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGL 238
Query: 284 TK 285
K
Sbjct: 239 YK 240
>sp|Q6JWW5|RL5_OIKDI 60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1
Length = 303
Score = 294 bits (752), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 142/222 (63%), Positives = 176/222 (79%), Gaps = 2/222 (0%)
Query: 47 FVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITC 106
FV V+KNK YFKRYQ KFKRRREGKTDY+ARKRL VQDKNKYNTPKYRL+VR +NKDI
Sbjct: 13 FVAVLKNKAYFKRYQPKFKRRREGKTDYFARKRLCVQDKNKYNTPKYRLVVRVTNKDIIA 72
Query: 107 QVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGC 166
Q+AY+R++GD I+ SAY+HELP+YG+ VGLTNY+AAYATGLL+ RR+L+ LD +Y G
Sbjct: 73 QIAYARLQGDVIVTSAYAHELPRYGVSVGLTNYSAAYATGLLIGRRVLQKFGLDSMYEGQ 132
Query: 167 TEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPG 226
EV G+EF E+ +FRCYLD GL +TSTGA++FG +KG D G++IPHS KRFPG
Sbjct: 133 IEVDGDEFYEEADAAEKASFRCYLDTGLARTSTGARIFGVLKGCADAGIDIPHSPKRFPG 192
Query: 227 YDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
+ + NAE H+ HIFG HV +YM +L EE++EA+KRQFS
Sbjct: 193 FADGK--LNAEAHKDHIFGGHVGDYMEKLEEENEEAYKRQFS 232
>sp|A2WXX3|RL51_ORYSI 60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A
PE=2 SV=2
Length = 304
Score = 293 bits (750), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 176/224 (78%), Gaps = 1/224 (0%)
Query: 46 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDIT 105
GFVK K Y+KR+QVKFKRRR+GKTDY AR RL QDKNKYNTPKYR +VRF+NKDIT
Sbjct: 3 GFVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDIT 62
Query: 106 CQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVG 165
Q+ Y+ I GD ++ +AYSHELP+YG++VGLTNYAAAY TGLLLARR+LK LD+ Y G
Sbjct: 63 AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEG 122
Query: 166 CTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFP 225
E TGE++ VE D+ FR LDVGL++T+TG +VFGA+KGA+DGGL+IPHS KRF
Sbjct: 123 NIEATGEDYYVEPADE-RRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 181
Query: 226 GYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
G+ + K +++IHRK+I+G HVA+YMR ++EE+ E F+ FSE
Sbjct: 182 GFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSE 225
>sp|Q5EY89|RL5_EIMTE 60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1
Length = 311
Score = 292 bits (747), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 138/228 (60%), Positives = 172/228 (75%), Gaps = 4/228 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M FVK +KNK YFKR+QVK++RRREGKTDY AR+RLI+QDKNKYN PKYR +VR +N +
Sbjct: 1 MAFVKAIKNKAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQV Y+ ++GD ++CSA S EL +YGIKVGLTNY+AAYATGLLLARRLLK L +
Sbjct: 61 LCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFK 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G + +GEE+ +E V + F+C LDVG++ T+ G +VFGAMKGA DGGL+IPHS KRF
Sbjct: 121 GLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRF 180
Query: 225 PGY----DNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
PG+ D +N E+HR I+GLHVAEYMR L EED E ++ QFS
Sbjct: 181 PGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFS 228
>sp|Q0JGY1|RL51_ORYSJ 60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A
PE=2 SV=1
Length = 304
Score = 291 bits (746), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 175/224 (78%), Gaps = 1/224 (0%)
Query: 46 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDIT 105
GFVK K Y KR+QVKFKRRR+GKTDY AR RL QDKNKYNTPKYR +VRF+NKDIT
Sbjct: 3 GFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDIT 62
Query: 106 CQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVG 165
Q+ Y+ I GD ++ +AYSHELP+YG++VGLTNYAAAY TGLLLARR+LK LD+ Y G
Sbjct: 63 AQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEG 122
Query: 166 CTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFP 225
E TGE++ VE D+ FR LDVGL++T+TG +VFGA+KGA+DGGL+IPHS KRF
Sbjct: 123 NIEATGEDYYVEPADE-RRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 181
Query: 226 GYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
G+ + K +++IHRK+I+G HVA+YMR ++EE+ E F+ FSE
Sbjct: 182 GFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSE 225
>sp|O59953|RL5_NEUCR 60S ribosomal protein L5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-5
PE=3 SV=1
Length = 301
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/227 (61%), Positives = 170/227 (74%), Gaps = 3/227 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F K+VKN Y+ R+Q K+KRRREGKTDYYARKRLI Q KNKYN PKYRL+VRF+N+DI
Sbjct: 1 MAFHKLVKNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
Q+ S I GD + SAYSHEL YGI+ GLTN+AAAYATGLLLARR+LK L LD +
Sbjct: 61 ILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFK 120
Query: 165 GCTEVTGEEFSVESVDKGPGA---FRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSV 221
G E GE E+ + G F+ +LDVGL +TSTGA+VFGAMKGA DGG+ IPHS
Sbjct: 121 GVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGASDGGIFIPHSE 180
Query: 222 KRFPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
RFPGYD ES++ +AE +K+IFG HVAEYM L+++D+E +K QF+
Sbjct: 181 NRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFN 227
>sp|O74306|RL5B_SCHPO 60S ribosomal protein L5-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl5b PE=2 SV=1
Length = 294
Score = 286 bits (733), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 177/237 (74%), Gaps = 1/237 (0%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F+K VK+ YF RYQ K++RRREGKTDYYARKRLI Q KNKYN PKYRL+VRFSN+ +
Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQ+ SR+ GD+++ A+S ELP+YGIK GL N+ AAYATGLL+ARR L + L Y
Sbjct: 61 TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G TE GE E+++ GP F+ +LDVGL +TSTG++VFGAMKGA DGGL IPHS RF
Sbjct: 121 GVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVGGWGTLSEQL 281
PG+D E+++ + E RK+I+G HVAEYM L ++D+E +++QFS + G S+QL
Sbjct: 181 PGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIAD-GIESDQL 236
>sp|P52822|RL5A_SCHPO 60S ribosomal protein L5-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl5a PE=1 SV=2
Length = 294
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 177/237 (74%), Gaps = 1/237 (0%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F+K VK+ YF RYQ K++RRREGKTDYYARKRLI Q KNKYN PKYRL+VRFSN+ +
Sbjct: 1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQ+ SR+ GD+++ A+S ELP+YGIK GL N+ AAYATGLL+ARR L + L Y
Sbjct: 61 TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G TE GE E+++ GP F+ +LDVGL +TSTG++VFGAMKGA DGGL IPHS RF
Sbjct: 121 GVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERVGGWGTLSEQL 281
PG+D E+++ + E RK+I+G HVAEYM L ++D+E +++QFS + G S+QL
Sbjct: 181 PGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIAD-GIESDQL 236
>sp|Q8LBI1|RL51_ARATH 60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=2
Length = 301
Score = 285 bits (730), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 172/225 (76%), Gaps = 3/225 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M FVK K+ YFKRYQVKF+RRR+GKTDY AR RLI QDKNKYNTPKYR +VRF+NKDI
Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
Q+ + I GD + SAY+HELP+YG+ VGLTNYAAAY TGLLLARR+LK L +D Y
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 165 GCTEVTGEEFSVESVD-KGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKR 223
G E TGE+FSVE D + P FR LDVGL++T+TG +VFGA+KGA+DGGL+IPHS KR
Sbjct: 121 GNVEATGEDFSVEPTDSRRP--FRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKR 178
Query: 224 FPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
F G+ E+K +AEIHR +I+G HV+ YM+ L E++ E + FS
Sbjct: 179 FAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFS 223
>sp|P49227|RL52_ARATH 60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2
SV=3
Length = 301
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 172/225 (76%), Gaps = 3/225 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M FVK K+ YFKRYQVKF+RRR+GKTDY AR RLI QDKNKYNTPKYR +VRF+NKDI
Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
Q+ + I GD + SAY+HELP+YG+ VGLTNYAAAY TGLLLARR+LK L +D Y
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 165 GCTEVTGEEFSVESVD-KGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKR 223
G E TGE+FSVE D + P FR LDVGL++T+TG +VFGA+KGA+DGGL+IPHS KR
Sbjct: 121 GNVEATGEDFSVEPTDSRRP--FRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKR 178
Query: 224 FPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
F G+ E+K +AEIHR +I+G HV+ YM+ L E++ E + FS
Sbjct: 179 FAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFS 223
>sp|Q8L4L4|RL52_ORYSJ 60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B
PE=3 SV=1
Length = 304
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 174/227 (76%), Gaps = 4/227 (1%)
Query: 43 LEMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNK 102
L+ GFVK K YFKR+QVKFKRRR+GKTDY AR RL QDKNKYNTPKYR + +NK
Sbjct: 3 LQGGFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNK 59
Query: 103 DITCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRL 162
DIT Q+ Y+ I GD ++ +AYSHELP+YG++VGLTNYAAAY TGLLLARR+L LD+
Sbjct: 60 DITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQE 119
Query: 163 YVGCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVK 222
Y G E TGE++ VE D+ FR LDVGL++T+TG +VFGA+KGA+DGGL+IPHS K
Sbjct: 120 YEGNVEATGEDYYVEPADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDK 178
Query: 223 RFPGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
RF G+ + K +++IHRK+I+G HVA+YMR ++EE+ E F+ FSE
Sbjct: 179 RFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSE 225
>sp|O22608|RL5_DUNSA 60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1
Length = 271
Score = 281 bits (720), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/227 (59%), Positives = 172/227 (75%), Gaps = 2/227 (0%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MG+VKVVK YF RYQVK++RRR+GKTDY AR RL+ QDKNKYNT KYRL+VRFSNK++
Sbjct: 1 MGYVKVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
TCQ+ YS I+GD ++ +AYS ELP YG+KVGLTNY+AAY GLL+ARR+L LNL Y
Sbjct: 61 TCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYK 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G E GE+++VE V+ GP F C LD GL +TSTG+KVF AMKGA+DGGL+IPH+ KRF
Sbjct: 121 GQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHNEKRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
GY + K + E+ +K+I+G HVAEY + EE+ E ++ FS V
Sbjct: 181 VGYAD--KKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYV 225
>sp|Q4N655|RL5_THEPA 60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1
Length = 306
Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/227 (59%), Positives = 166/227 (73%), Gaps = 3/227 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F++VVKNK YF+R+QVKF+RRREGKTDYYAR+RL+ QDKNKY++PKYRL+VR +NK +
Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+ S + GD + SA S EL YG+KVGLTNYAAAY TGLLLARRLL L LD +V
Sbjct: 61 ICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFV 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G E GE + VE D F+ LDVG+ +TG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRF 180
Query: 225 PGY---DNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
PGY D + ++A+ HR IFG HVA YM L EED E +KRQFS
Sbjct: 181 PGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFS 227
>sp|Q4UDE7|RL5_THEAN 60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1
Length = 306
Score = 278 bits (711), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/227 (59%), Positives = 166/227 (73%), Gaps = 3/227 (1%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F++VVKNK YF+R+QVKF+RRREGKTDYYAR+RL+ QDKNKY++PKYRL+VR +NK +
Sbjct: 1 MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+ S + GD + SA S EL YG+KVGLTNYAAAY TGLLLARRLL L LD +V
Sbjct: 61 ICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFV 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G E GE + VE D F+ LDVG+ +TG +VFGA+KGA DGGL++PHS KRF
Sbjct: 121 GKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRF 180
Query: 225 PGY---DNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
PGY D + ++A+ HR IFG HVA YM L EED E +K+QFS
Sbjct: 181 PGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKKQFS 227
>sp|Q54XX3|RL5_DICDI 60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1
SV=1
Length = 292
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/227 (61%), Positives = 171/227 (75%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVK K Y+ RYQV+F+RRREGKTDY R RLI QDKNKYN+PKYRL+ R +N D+
Sbjct: 1 MGFVKVVKTKAYYSRYQVQFRRRREGKTDYQQRHRLITQDKNKYNSPKYRLVARITNTDV 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
QV YS+I GD ++C+AY+HELP++G+KVGLTNYA+ YATGLLLARRLL L L LY
Sbjct: 61 IAQVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYK 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G +V G+ F V+ VD P F+ LDVGL +TSTGAKVF +KGAVDGG+ +PH RF
Sbjct: 121 GAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSERV 271
GY+ ESK NAE R +IFG HVA YM L ED++A+K+ FS+ +
Sbjct: 181 AGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYI 227
>sp|P26321|RL5_YEAST 60S ribosomal protein L5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL5 PE=1 SV=4
Length = 297
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 167/223 (74%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
M F K K+ Y R+Q F+RRREGKTDYY RKRL+ Q K KYNTPKYRL+VRF+NKDI
Sbjct: 1 MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+ S I GD ++ +AYSHELP+YGI GLTN+AAAYATGLL+ARR L+ L LD Y
Sbjct: 61 ICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYK 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G EV GE E+V+ GP F+ +LD+GL +T+TGA+VFGA+KGA DGGL +PHS RF
Sbjct: 121 GVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRF 180
Query: 225 PGYDNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQF 267
PG+D E+++ + E+ R +IFG HV++YM +L+++D+E F F
Sbjct: 181 PGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELF 223
>sp|Q231U7|RL5_TETTS 60S ribosomal protein L5 OS=Tetrahymena thermophila (strain SB210)
GN=RPL5 PE=1 SV=2
Length = 301
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 168/230 (73%), Gaps = 5/230 (2%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKV+K K YFKR+Q K++RRREG TDYYARKRLI+QDK+KYNTPKYRL+ R +N I
Sbjct: 1 MGFVKVLKTKAYFKRFQTKYRRRREGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
Q+ Y+ ++ D ++C+A S+EL ++G+ GL +YAAAYATGLLLARRLLK + LD +Y
Sbjct: 61 IAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYA 120
Query: 165 GCTEVTGEEFSVESVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRF 224
G T+V G F+V+ K F+ LD GL++T+TG +VFG +KGA DGG+NIPHS RF
Sbjct: 121 GQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRF 180
Query: 225 PGY-----DNESKDFNAEIHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
PGY + ES + E H+ IFG H+ YM+ L + +EAF++QFS+
Sbjct: 181 PGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSK 230
>sp|Q95276|RL5_PIG 60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3
Length = 125
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/125 (77%), Positives = 112/125 (89%)
Query: 45 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDI 104
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL++QDKNKYNTPKYR+IVR +N+DI
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 105 TCQVAYSRIEGDHIICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYV 164
CQ+AY+RIEGD I+C+AY+HELPKYG+KVGLTNYAAAY TGLLLARRLL + ++Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYG 120
Query: 165 GCTEV 169
G EV
Sbjct: 121 GQVEV 125
>sp|Q2FSH0|RL18_METHJ 50S ribosomal protein L18P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl18p PE=3 SV=1
Length = 175
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 102/193 (52%), Gaps = 47/193 (24%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY V F+RRREG+T+Y+AR RL+V K R++VR +N+ I CQ+ + +EGD
Sbjct: 6 RYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHMEGDRT 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+A S EL K+G + L N AAY TG+LLA R LK G+E ++
Sbjct: 59 HVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK--------------AGQEGAI-- 102
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
LD+GL + + GA+VF A+KGAV+ G +IPH+ + P D K
Sbjct: 103 -----------LDIGLHRATPGARVFAALKGAVEAGFDIPHNEEILPA-DERCK------ 144
Query: 239 HRKHIFGLHVAEY 251
G H+AEY
Sbjct: 145 ------GEHIAEY 151
>sp|A7I5Q8|RL18_METB6 50S ribosomal protein L18P OS=Methanoregula boonei (strain 6A8)
GN=rpl18p PE=3 SV=1
Length = 174
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 34/170 (20%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY V F+RRREG+TDYY R +L+V D R++VR +N+ I Q+ + +EGD
Sbjct: 6 RYLVAFRRRREGRTDYYQRTKLVVADAP-------RMVVRRTNRHIIVQLVTAEMEGDKT 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+ SA S EL KYG N AAY TGLL A + K G++ ++
Sbjct: 59 LVSANSAELEKYGYTGATANTPAAYLTGLLFAAKAKK--------------AGQDSAI-- 102
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYD 228
LD+GL + + GA+VF A+KGAVDGGL IP+ P D
Sbjct: 103 -----------LDIGLNRATPGARVFAALKGAVDGGLEIPYGESILPSED 141
>sp|O26130|RL18_METTH 50S ribosomal protein L18P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl18p PE=3 SV=1
Length = 192
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 101/210 (48%), Gaps = 50/210 (23%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY++ F+RRREGKTDY AR +++ T K RL+VR + + Q+ + GD
Sbjct: 6 RYKLAFRRRREGKTDYRARYKMV-------ETGKSRLVVRITTYHVIAQIINVGMNGDET 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+ SA+S +L K G G +N AAAY TG L +R LK
Sbjct: 59 LVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALKE---------------------- 96
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
G LD+GL G+KVF A+KGAVD GLN+PH P +ES+
Sbjct: 97 -----GIEEAVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGESVLP---DESR------ 142
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
I G H+ EY L D+E +++FS
Sbjct: 143 ----IRGEHIMEYAESL---DEEELRKRFS 165
>sp|Q8ZVV7|RL18_PYRAE 50S ribosomal protein L18P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl18p PE=3 SV=1
Length = 205
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 103/210 (49%), Gaps = 47/210 (22%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY+V F+RRREG T+Y R++L++ K RL+VR +NK I Q+ ++ +GD
Sbjct: 6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQIVVAKPQGDVT 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
I A + L K+G + N AAAY GL V G +
Sbjct: 59 IVGADTRILAKFGWRGDENNVAAAYLLGL---------------------VVGYKARARR 97
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
V++ LD+GL + + GA+VF +KGA+D GL IPH + P D
Sbjct: 98 VEE------AILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLPDEDR--------- 142
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
I G HVAEY +L EE+ EA+K +FS
Sbjct: 143 ----IKGKHVAEYAEKLKEENPEAYKARFS 168
>sp|A8M9I3|RL18_CALMQ 50S ribosomal protein L18P OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rpl18p
PE=3 SV=1
Length = 207
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 101/212 (47%), Gaps = 48/212 (22%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY+VKF+RRREGKTDYY R+ +++ K RL+VRFSN+ + QV S +GD
Sbjct: 6 RYKVKFRRRREGKTDYYKRRIMVISGKP-------RLVVRFSNRYVLAQVIVSAPQGDFT 58
Query: 119 ICSAYSHEL-PKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVE 177
+ A S EL K+G G N AAY GLL+ R L
Sbjct: 59 VAEASSRELVKKFGWLGGTGNTPAAYLVGLLIGYRALSK--------------------- 97
Query: 178 SVDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAE 237
G LDVGL + + G ++F +KGAVD GL +PH + P D
Sbjct: 98 ------GIKLAVLDVGLHRVTKGGRLFAVVKGAVDAGLEVPHDEEVQPSED--------- 142
Query: 238 IHRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
+ G H+A+Y L + + E +K +FS+
Sbjct: 143 ----RLNGEHIAQYAADLKQSNPELYKIRFSK 170
>sp|B8GKF2|RL18_METPE 50S ribosomal protein L18P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl18p PE=3 SV=1
Length = 175
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 34/168 (20%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY V F+RRREGKTDYY R +LIV ++ R++VR +N+ I Q+ + +EGD
Sbjct: 6 RYFVPFRRRREGKTDYYKRGKLIVAEQP-------RMVVRKTNRHIIVQMIVAEMEGDKT 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+ +A S EL YG K +N AAY TG+L A +K LN D
Sbjct: 59 LVTANSAELLDYGYKGSTSNTPAAYLTGMLFA---VKALNADH----------------- 98
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPG 226
P A LD+GL + + GAKVF A+KGAV+ GL++PH + P
Sbjct: 99 ----PAAI---LDIGLNRATYGAKVFAALKGAVEAGLDVPHGEEILPA 139
>sp|A5UL69|RL18_METS3 50S ribosomal protein L18P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl18p PE=3 SV=1
Length = 193
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 99/210 (47%), Gaps = 50/210 (23%)
Query: 60 YQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHII 119
Y+V F+RRREGKTDY AR +L+ DK+ RL+VR SN T QV EGD +
Sbjct: 7 YKVPFRRRREGKTDYAARMKLVDYDKS-------RLVVRLSNAHATVQVIDYAPEGDITL 59
Query: 120 CSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVESV 179
SA S +L YG G +N +A Y TG L A+R L
Sbjct: 60 ASAVSKQLANYGYLGGASNTSAVYLTGYLCAKRAL------------------------- 94
Query: 180 DKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEIH 239
G LD+GL G+KVF A+KGAVD GL+IP+ P +ES+
Sbjct: 95 --AKGVDSAILDIGLKSAIKGSKVFAALKGAVDAGLDIPYGEAVLP---DESR------- 142
Query: 240 RKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
I G HVA Y L DD+ + FS+
Sbjct: 143 ---INGEHVANYAESL---DDDEIAKLFSK 166
>sp|Q975J9|RL18_SULTO 50S ribosomal protein L18P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl18p PE=3 SV=1
Length = 196
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 103/211 (48%), Gaps = 49/211 (23%)
Query: 60 YQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHII 119
Y+VK++RRREGKT+YY R ++ + RL+VR +NK I Q+A +GD I+
Sbjct: 7 YRVKYRRRREGKTNYYKRYTYVINNTT-------RLVVRLTNKYIIAQIAKFNPKGDVIV 59
Query: 120 CSAYSHELP-KYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+A+S EL K+G K L N AAY TG LL R LK G E
Sbjct: 60 VAAHSMELAKKFGWKGDLNNTPAAYLTGYLLGVRALK--------AGIKEAVA------- 104
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
D+GL G+++F A+KGA+D GL+IP + I
Sbjct: 105 ------------DIGLFVPVKGSRIFTAIKGAIDAGLSIPVG--------------DLGI 138
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
I G+H+A Y ++L E+ E FKR FS+
Sbjct: 139 KEDRIKGVHIASYAQKLEAENPELFKRLFSK 169
>sp|A1RWR7|RL18_THEPD 50S ribosomal protein L18P OS=Thermofilum pendens (strain Hrk 5)
GN=rpl18p PE=3 SV=1
Length = 196
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 101/210 (48%), Gaps = 47/210 (22%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY+V KRRREGKT+YY R++LI+ K RL+VR ++ Q+A + +GD +
Sbjct: 6 RYRVPLKRRREGKTNYYKRRKLIISGKP-------RLVVRVLSRTAIVQIAKATPKGDVV 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
I SA+S+EL KYG K N A Y G L A++ LK G TE
Sbjct: 59 IASAHSNELKKYGWKGYRRNTPALYLLGFLAAKKALKQ--------GVTE---------- 100
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
+D+GL + ++VF A+KGA+D GL IP P D
Sbjct: 101 ---------AIVDIGLHRPVKASRVFAAVKGALDAGLKIPVGDGVLPEDD---------- 141
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
+ G H+A Y + L E + E FK +FS
Sbjct: 142 ---RVRGEHIANYAKMLKESNPELFKLRFS 168
>sp|B1L785|RL18_KORCO 50S ribosomal protein L18P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl18p PE=3 SV=1
Length = 195
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 103/211 (48%), Gaps = 49/211 (23%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY+VKF+RRREGKTDY R L+ + K R++VR +N+ I Q + EGD +
Sbjct: 6 RYKVKFRRRREGKTDYMKRLALL-------KSRKPRVVVRRTNRYIIVQFIGFKGEGDEV 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
I A+S EL KYG G N AAY TG L A R K G TE
Sbjct: 59 IAYAFSKELEKYGWPYGGKNLPAAYLTGYLAAMRAKK--------AGVTE---------- 100
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
LD+G ++ G++++ A+KG +D G+++PHS + P D
Sbjct: 101 ---------AILDIGRFPSTKGSRLYAALKGVLDAGIDVPHSPEILPDED---------- 141
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFSE 269
I G H+A + +L EE + +RQFS+
Sbjct: 142 ---RIRGEHIASFAEKLEEEG--SLERQFSD 167
>sp|A4WMD6|RL18_PYRAR 50S ribosomal protein L18P OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl18p PE=3 SV=1
Length = 205
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 47/210 (22%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY+V F+RRREG T+Y R++L++ K RL+VR +NK I Q+ ++ GD
Sbjct: 6 RYKVPFRRRREGLTNYRKRRKLVISKKP-------RLVVRKTNKHIIAQIVVAKPIGDET 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+ A + L K+G + N +AAY GL V G + +
Sbjct: 59 VAGADTRILTKFGWRGDENNTSAAYLLGL---------------------VVGYKARMRG 97
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
V++ LD+GL + + GA+VF +KGA+D GL IPH + P +
Sbjct: 98 VEE------AILDIGLHRPTPGARVFAVLKGALDAGLKIPHGEEVLPSDER--------- 142
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
I G H+AEY +L EE+ +A+K +FS
Sbjct: 143 ----IRGEHIAEYAAKLKEENPDAYKARFS 168
>sp|A6UWV7|RL18_META3 50S ribosomal protein L18P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl18p PE=3 SV=1
Length = 194
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 97/210 (46%), Gaps = 47/210 (22%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
+Y+V F+RRREGKT++ R + TP RL+ R S +I Q+ GD I
Sbjct: 6 KYRVPFRRRREGKTNFRLRLK-----LLLSRTP--RLVARKSLNNIVAQIVEYDEVGDKI 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+ SA+S E+ K G K N AAY TGLLL ++ LK
Sbjct: 59 VVSAHSKEIVKLGYKGHCGNVPAAYLTGLLLGKKALKE---------------------- 96
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
G LD+GL + GA V +KGAVD G++IPHS + PG D
Sbjct: 97 -----GNEEAILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGED---------- 141
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
I G HV EY L ED+E + +QFS
Sbjct: 142 ---RINGSHVKEYAELLKVEDEEKYNKQFS 168
>sp|A3MSJ3|RL18_PYRCJ 50S ribosomal protein L18P OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl18p PE=3 SV=1
Length = 205
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 47/210 (22%)
Query: 59 RYQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNKDITCQVAYSRIEGDHI 118
RY+V F+RRREG T+Y R++L++ K RL+VR +NK + Q+ +R GD
Sbjct: 6 RYKVPFRRRREGVTNYRKRRKLLLSRKP-------RLVVRKTNKHLIAQIVIARPHGDET 58
Query: 119 ICSAYSHELPKYGIKVGLTNYAAAYATGLLLARRLLKNLNLDRLYVGCTEVTGEEFSVES 178
+ + L K+G K N +AAY GL++ +
Sbjct: 59 VVGLDTRVLSKFGWKGDENNTSAAYLLGLIVGYKA------------------------- 93
Query: 179 VDKGPGAFRCYLDVGLMKTSTGAKVFGAMKGAVDGGLNIPHSVKRFPGYDNESKDFNAEI 238
+ G LD+GL + + GA+VF MKG +D G+ +PH + P +
Sbjct: 94 --RAKGIKEAILDIGLHRPTPGARVFAVMKGVIDAGVEVPHGEEVVPSEER--------- 142
Query: 239 HRKHIFGLHVAEYMRQLSEEDDEAFKRQFS 268
I G HVAEY ++L EE EA+K +FS
Sbjct: 143 ----IRGEHVAEYAKRLKEEAPEAYKARFS 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,586,061
Number of Sequences: 539616
Number of extensions: 5723950
Number of successful extensions: 12040
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11734
Number of HSP's gapped (non-prelim): 125
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)