BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5757
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ HL E +K L++GSGSG L+ S ++ TG+VIGI+H+ +LV SI N+ +
Sbjct: 69 LELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDP 128
Query: 80 RLLTDGHIKFV 90
L+T G IK +
Sbjct: 129 SLITSGRIKLI 139
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT S ++ GQV+GI+H+ +LV+ SI N+ +
Sbjct: 69 LELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G +K +
Sbjct: 129 TLLSSGRVKLI 139
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ LNE +K L++GSGSG LT + ++ +G+VIGI+H+ +LV+ SI N+ +
Sbjct: 69 LELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 MLLSSGRVQLV 139
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT + ++ TG+VIGI+H+ +LV+ SI N+ +
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 TLLSSGRVQLV 139
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT + ++ TG+VIGI+H+ +LV+ SI N+ +
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 TLLSSGRVQLV 139
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT + ++ TG+VIGI+H+ +LV+ S+ N+ +
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 TLLSSGRVQLV 139
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT + ++ ++G+VIGI+H+ +LV+ SI N+ +
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 MLLSSGRVRLV 139
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT + ++ +G+VIGI+H+ +LV+ SI N+ +
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 MLLSSGRVQLV 139
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L ++ L+E +K L++GSGSG LT + ++ +G+VIGI+H+ +LV+ SI N+ +
Sbjct: 69 LELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDP 128
Query: 80 RLLTDGHIKFV 90
LL+ G ++ V
Sbjct: 129 MLLSSGRVRLV 139
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
L +++ HL +VL++GSG+GYLT + ++ + G+ IG+EH+P+LV SS++NI S A
Sbjct: 74 LQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAA 133
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHS 77
T L +++ +L L++GSGSGYLT + ++ G+ +GIEH+P+LV +S +N+ S
Sbjct: 72 TCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERS 131
Query: 78 -NARLLTDGHIKF 89
A L+ DG + F
Sbjct: 132 AAAALMKDGSLSF 144
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 14 SAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQN 73
+A L YL Q HL +K L++GSGSGYLT ++ ++ G V+GIEH+PQLV S +N
Sbjct: 66 AAALDYL---QNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKN 122
Query: 74 ILHSNARLLTDGHI 87
I ++ L G++
Sbjct: 123 IRKHHSEQLERGNV 136
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKF 89
N L+IGSGSGY+T + LM TG+VIG+EH+P+L+ SI++I ++ LL I+F
Sbjct: 126 NGVALDIGSGSGYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLLD--RIQF 183
Query: 90 VALGMIK 96
+ IK
Sbjct: 184 LVGDGIK 190
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNIL 75
T L ++P L L+IGSGSGYL ++ ++ G V GIEH+PQLV +S +N+L
Sbjct: 67 TALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLL 124
>sp|A6UWM1|PIMT_META3 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3
SV=1
Length = 216
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQL---VNSSIQNILHSNARLL 82
L E KVLEIG+GSGY +++E++ GQVI IE +P+L S+++ + ++N +++
Sbjct: 74 LKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKKLGYTNVKVI 132
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR----LL 82
L E KVLE+G G GY +++EL+ +G V +E +P+LV + +N+ + R +L
Sbjct: 68 LREGMKVLEVGGGCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERARYRNVSMIL 127
Query: 83 TDGHIKFVALGMIKRI 98
DG + + RI
Sbjct: 128 GDGTLGYSEQAPYDRI 143
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 7 GAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQL 66
G I + L ++ P E KVL++G+GSGY + +++EL+ G+V +E +P+L
Sbjct: 88 GQTISAPGVVGRMLQLLDPQPGE--KVLDVGAGSGYQSALLAELVTPGGRVYAVERIPEL 145
Query: 67 VNSSIQNILHSNAR 80
+ +N+ + R
Sbjct: 146 AEYARENLEKTGYR 159
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTG-----QVIGIEHVPQLVNSSIQNI 74
L ++ HL +++L++GSGSGYLT + + G +++GIEH +LV S N+
Sbjct: 69 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANL 128
Query: 75 LHSNARLLTDGHIKFV 90
+ +L G + V
Sbjct: 129 NTDDRSMLDSGQLLIV 144
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 11/78 (14%)
Query: 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
AI+T L +P KVLE+G+GSGY +++EL+ G+VI +E +P+L + + N+
Sbjct: 72 AIMTELLDPRP----GHKVLEVGAGSGYHAAVVAELVKPDGRVITVERIPELADFARNNL 127
Query: 75 LHSNARLLTDGHIKFVAL 92
+ G+ +FV +
Sbjct: 128 KKT-------GYDRFVKV 138
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSS 70
L E KVLE+G+G GY + +E++ +G+VI IE++P+L +
Sbjct: 74 LREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERA 117
>sp|Q8PW90|PIMT_METMA Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pcm PE=3 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR----L 81
L E KVLEIG+GSGY ++SEL+ TG + +E V L N + +N+ + + L
Sbjct: 100 ELAEGHKVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKEAGYKNVTVL 159
Query: 82 LTDGHIKFVALGMIKRI 98
L +G + + RI
Sbjct: 160 LENGSMGYPGYAPYDRI 176
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
L+E KVLEIG+GSGY +++EL+ TG + +E + LVN + +N+
Sbjct: 95 ELSEGHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNL 143
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR----L 81
L+E KVLEIG+GSGY ++ EL+ +G V +E + LV+ + +N+ + L
Sbjct: 111 ELSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYENVTVL 170
Query: 82 LTDGHIKFVALGMIKRI 98
L DG + + RI
Sbjct: 171 LDDGSMGYSKCAPYDRI 187
>sp|A6UR90|PIMT_METVS Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pcm
PE=3 SV=1
Length = 209
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNIL---HSNARLL- 82
L++ VLEIG+GSGY ++ E++ +G++ IE V +L NS+ +N+L ++N ++
Sbjct: 74 LDKGQNVLEIGTGSGYHAAVVLEIIGKSGKLTTIERVFELFNSAKENLLKFGYNNIEVIY 133
Query: 83 ---TDGHIK 88
T GHI+
Sbjct: 134 GDGTKGHIE 142
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
L KVLE+G+GSGY +++EL+ G V IE +P+L + + +
Sbjct: 72 ELRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAERARERL 120
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
L E +VLEIG+G GY + +E++ G V+ +E +P+L + +N+
Sbjct: 74 LREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEIAKRNL 121
>sp|Q6M116|PIMT_METMP Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=pcm PE=3 SV=1
Length = 212
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
L+E VLE+G+GSGY ++S+++ +G+V IE +P+L +S + +
Sbjct: 74 LDEGQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPELFENSKKTL 121
>sp|A6VI91|PIMT_METM7 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1
Length = 212
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH 76
L+ VLE+G+GSGY ++SE++ +G V IE +P+L S Q +L
Sbjct: 74 LDVGQNVLEVGTGSGYHAAVVSEIVGESGNVTTIERIPELFEKSKQVLLE 123
>sp|A4G087|PIMT_METM5 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1
Length = 212
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72
L+ VLE+G+GSGY ++SE++ +G+V IE +P+L S Q
Sbjct: 74 LDVGQNVLEVGTGSGYHAAVVSEIVGESGKVTTIERIPELFEKSKQ 119
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
+ E +LEIGSGSGY +++EL G+V +E +P+LV+ + N+
Sbjct: 64 ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERIPELVDLARNNL 111
>sp|A9A8I9|PIMT_METM6 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1
Length = 212
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72
LN VLE+G+GSGY ++S+++ +G+V +E +P+L S Q
Sbjct: 74 LNMGQNVLEVGTGSGYQAAVVSKIVGESGKVTTVERIPELFEKSKQ 119
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
AI+ ++ ++P +N VLE+G+GSG+ +I+E++ G V IE +P+LV + +N+
Sbjct: 71 AIMLEIADLKPGMN----VLEVGTGSGWNAALIAEIVK--GDVYSIERIPELVEFAKRNL 124
Query: 75 LHSNAR----LLTDGHIKF 89
+ + +L DG F
Sbjct: 125 ERAGVKNVHVILGDGSKGF 143
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
L + +VLEIG+GSGY ++S L+ +G + IE +P+LV + + I
Sbjct: 64 ELKDGDRVLEIGTGSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRI 112
>sp|Q57636|PIMT_METJA Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pcm PE=1 SV=1
Length = 215
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNS---SIQNILHSNARLLT 83
L KVLEIG+G GY + +E++ G V+ IE +P+L +++ + + N ++
Sbjct: 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV 134
Query: 84 -DGHIKFVALGMIKRIET 100
DG + + L RI T
Sbjct: 135 GDGTLGYEPLAPYDRIYT 152
>sp|B1YC47|PIMT_PYRNV Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)
GN=pcm PE=3 SV=1
Length = 207
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 32 KVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI-----------LHSNAR 80
K+LE+G+GSGY + +E M G+V +E V +L + QNI H + R
Sbjct: 75 KILEVGAGSGYQAAVCAEAMERRGRVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGR 134
Query: 81 LLTDGHIKFVAL 92
+ H F A+
Sbjct: 135 SGLERHAPFDAI 146
>sp|A6LNM3|PIMT_THEM4 Protein-L-isoaspartate O-methyltransferase OS=Thermosipho
melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3
SV=1
Length = 198
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQL 66
L E KVLEIG+GSGY ++S L+ +G + IE + QL
Sbjct: 64 LKEKDKVLEIGTGSGYNAAVMSLLVGKSGHIYTIERIKQL 103
>sp|Q8TZR3|PIMT_PYRFU Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pcm
PE=1 SV=2
Length = 219
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
AI+ ++ ++P +N +LE+G+GSG+ +ISE++ + V IE +P+LV + +N+
Sbjct: 71 AIMLEIANLKPGMN----ILEVGTGSGWNAALISEIVKT--DVYTIERIPELVEFAKRNL 124
Query: 75 LHSNAR----LLTDGHIKF 89
+ + +L DG F
Sbjct: 125 ERAGVKNVHVILGDGSKGF 143
>sp|Q2LUT4|PIMT_SYNAS Protein-L-isoaspartate O-methyltransferase OS=Syntrophus
aciditrophicus (strain SB) GN=pcm PE=3 SV=1
Length = 218
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSS 70
L KVLEIG+GSGY T +++EL + QV IE + L N++
Sbjct: 76 DLKGREKVLEIGTGSGYQTALLAELAD---QVFSIERIASLANNA 117
>sp|Q8ZYN0|PIMT_PYRAE Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=pcm PE=3 SV=1
Length = 205
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 7 GAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQL 66
GA I + +I+P K+LE+G+GSGY + +E + G++ IE V +L
Sbjct: 52 GATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIEKKGRIYTIEIVKEL 109
Query: 67 VNSSIQNI 74
+ QN+
Sbjct: 110 AVFAAQNL 117
>sp|A1RSC6|PIMT_PYRIL Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=pcm PE=3 SV=1
Length = 207
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 32 KVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
K+LE+G+GSGY + +E + G+V IE V +L + QNI
Sbjct: 75 KILEVGTGSGYQAAVCAEAIERKGKVYTIEIVKELAIYAAQNI 117
>sp|B1XQE1|PIMT_SYNP2 Protein-L-isoaspartate O-methyltransferase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=pcm PE=3 SV=1
Length = 222
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSS 70
HL +SKVLEIG+G GY +++E+ +V +E VP+L +
Sbjct: 85 HLTPSSKVLEIGTGCGYQAAILAEIAQ---EVFTVEVVPELARQA 126
>sp|Q0W2W0|PIMT_UNCMA Protein-L-isoaspartate O-methyltransferase OS=Uncultured
methanogenic archaeon RC-I GN=pcm PE=3 SV=1
Length = 188
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVN---SSIQNILHSNAR-L 81
+ E +KVLEIG+G GY +++ L ++G V +E +P+L + S + + N +
Sbjct: 46 DIREGNKVLEIGTGLGYHAAVMAVLAGASGVVYTVERIPELADMARSVLSRLGFDNVKVF 105
Query: 82 LTDG 85
L DG
Sbjct: 106 LRDG 109
>sp|A3DMG3|PIMT_STAMF Protein-L-isoaspartate O-methyltransferase OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pcm PE=3
SV=1
Length = 225
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 12/65 (18%)
Query: 33 VLEIGSGSGYLTNMISELM-----NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHI 87
VLEIG+GSGY +++E++ N G V +E +P+L + +N+ + G+I
Sbjct: 83 VLEIGTGSGYQAAVLAEIVAKQDPNRRGHVYTVERIPELAEFAKKNLERT-------GYI 135
Query: 88 KFVAL 92
++V +
Sbjct: 136 EYVTV 140
>sp|Q9UXX0|PIMT_PYRAB Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pcm PE=3 SV=2
Length = 216
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR----LL 82
L E VLE+G+GSG+ +IS ++ + V IE +P+LV + +N+ + + +L
Sbjct: 75 LKEGMNVLEVGTGSGWNAALISYIVKT--DVYSIERIPELVEFAKRNLERAGVKNVHVIL 132
Query: 83 TDGHIKF 89
DG F
Sbjct: 133 GDGSKGF 139
>sp|Q57598|TRMI_METJA tRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase TrmI
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=trmI PE=3
SV=1
Length = 282
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
I + + E V+E G+GSG LT +S + TG+VI + P+ + +N+L A
Sbjct: 80 IARAGIREGETVVEAGTGSGALTMYLSNAVGKTGKVITYDIRPEFAKVARKNLLRVGA 137
>sp|C3L3G5|PRMA_CLOB6 Ribosomal protein L11 methyltransferase OS=Clostridium botulinum
(strain 657 / Type Ba4) GN=prmA PE=3 SV=1
Length = 312
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSN 78
++ ++ H+ E+ V +IG GSG L+ ++L VIG++ P V SS +NI ++N
Sbjct: 167 INALEKHIKEDRTVFDIGCGSGILSIAAAKL--GAKHVIGVDLDPVAVKSSKENIKYNN 223
>sp|A3MY16|PIMT_PYRCJ Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1
Length = 207
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 7 GAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQL 66
GA I + +I+P K+LE+G+GSGY + +E + G+V +E V +L
Sbjct: 52 GATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIERQGKVYTVEIVREL 109
Query: 67 VNSSIQNI 74
+ QN+
Sbjct: 110 AIFAAQNL 117
>sp|Q1D6W9|PIMT_MYXXD Protein-L-isoaspartate O-methyltransferase OS=Myxococcus xanthus
(strain DK 1622) GN=pcm PE=3 SV=1
Length = 212
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSS 70
L + +VLEIG+GSGY T ++S L +V +E VP+L S+
Sbjct: 69 QLQGDERVLEIGTGSGYQTALLSLLCR---EVYSVEIVPELAQSA 110
>sp|A7HHV3|PIMT2_ANADF Protein-L-isoaspartate O-methyltransferase 2 OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=pcm2 PE=3 SV=2
Length = 243
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74
L +VLE+GSGSGY +++ L G V GIE P+L S++ +
Sbjct: 108 LRGGERVLEVGSGSGYAAAVLAHL---AGAVYGIELEPELHARSVETL 152
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNST-------GQVIGIEHVPQLV 67
A++T + ++P + KVLE+G+GSGY +++E++ + G V IE +P+L
Sbjct: 75 AMMTEYADLKPGM----KVLEVGAGSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELA 130
Query: 68 NSSIQNI 74
+ +N+
Sbjct: 131 EFARRNL 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,794,792
Number of Sequences: 539616
Number of extensions: 1830126
Number of successful extensions: 7349
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 7026
Number of HSP's gapped (non-prelim): 509
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)