Query psy5757
Match_columns 139
No_of_seqs 102 out of 1995
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 17:15:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5757.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5757hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.3E-18 4.5E-23 126.0 8.4 105 21-138 62-173 (261)
2 3lbf_A Protein-L-isoaspartate 99.7 1.9E-16 6.5E-21 110.3 9.9 113 5-137 55-168 (210)
3 1r18_A Protein-L-isoaspartate( 99.7 1.9E-16 6.5E-21 111.8 8.0 113 4-123 59-177 (227)
4 3p9n_A Possible methyltransfer 99.7 9.5E-16 3.2E-20 105.3 10.8 113 14-138 28-148 (189)
5 2pbf_A Protein-L-isoaspartate 99.7 4.1E-16 1.4E-20 109.8 9.1 116 5-123 56-176 (227)
6 1vl5_A Unknown conserved prote 99.7 2E-16 7E-21 113.5 7.5 106 16-138 26-135 (260)
7 1nkv_A Hypothetical protein YJ 99.6 7.5E-16 2.6E-20 110.0 9.5 110 13-138 22-135 (256)
8 2yxe_A Protein-L-isoaspartate 99.6 9.3E-16 3.2E-20 107.1 9.7 105 6-124 56-161 (215)
9 4hg2_A Methyltransferase type 99.6 5.1E-17 1.7E-21 117.4 2.9 101 18-138 28-130 (257)
10 3dh0_A SAM dependent methyltra 99.6 5.4E-16 1.8E-20 108.4 7.8 108 17-138 27-138 (219)
11 3u81_A Catechol O-methyltransf 99.6 6.7E-16 2.3E-20 108.7 8.2 107 27-138 56-165 (221)
12 1xxl_A YCGJ protein; structura 99.6 8E-16 2.8E-20 109.4 8.1 111 11-138 5-119 (239)
13 1i1n_A Protein-L-isoaspartate 99.6 2E-15 6.9E-20 106.2 9.6 112 5-123 53-165 (226)
14 3e05_A Precorrin-6Y C5,15-meth 99.6 2.2E-15 7.4E-20 104.6 9.5 113 11-138 24-137 (204)
15 3kkz_A Uncharacterized protein 99.6 1.2E-15 4.2E-20 109.9 8.4 109 15-138 33-145 (267)
16 3gdh_A Trimethylguanosine synt 99.6 3E-15 1E-19 106.3 9.8 107 16-138 66-176 (241)
17 3hem_A Cyclopropane-fatty-acyl 99.6 2.7E-15 9.2E-20 110.0 9.7 96 27-138 70-178 (302)
18 3f4k_A Putative methyltransfer 99.6 1.6E-15 5.5E-20 108.4 8.2 110 14-138 32-145 (257)
19 1dl5_A Protein-L-isoaspartate 99.6 2.4E-15 8.4E-20 111.3 9.4 102 8-123 56-158 (317)
20 3jwh_A HEN1; methyltransferase 99.6 2E-15 7E-20 105.6 8.3 113 16-138 18-136 (217)
21 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.5E-15 8.6E-20 101.7 8.2 113 11-138 9-122 (178)
22 3dlc_A Putative S-adenosyl-L-m 99.6 1.5E-15 5.2E-20 105.6 7.1 95 31-138 45-143 (219)
23 3bus_A REBM, methyltransferase 99.6 2.9E-15 9.9E-20 108.0 8.7 99 27-138 59-161 (273)
24 3duw_A OMT, O-methyltransferas 99.6 3.4E-15 1.2E-19 104.9 8.8 116 16-138 46-162 (223)
25 3grz_A L11 mtase, ribosomal pr 99.6 1.8E-15 6.2E-20 105.0 7.1 107 16-138 47-154 (205)
26 3mti_A RRNA methylase; SAM-dep 99.6 1.6E-15 5.6E-20 103.6 6.6 88 16-117 9-97 (185)
27 1pjz_A Thiopurine S-methyltran 99.6 1.4E-15 4.6E-20 106.1 6.2 104 27-138 20-135 (203)
28 3jwg_A HEN1, methyltransferase 99.6 3.6E-15 1.2E-19 104.4 8.2 113 16-138 18-136 (219)
29 3tr6_A O-methyltransferase; ce 99.6 4E-15 1.4E-19 104.5 8.4 115 17-137 53-168 (225)
30 2o57_A Putative sarcosine dime 99.6 4.6E-15 1.6E-19 108.3 8.8 99 27-138 80-182 (297)
31 3ofk_A Nodulation protein S; N 99.6 1.6E-15 5.5E-20 105.9 6.1 95 27-138 49-149 (216)
32 1jg1_A PIMT;, protein-L-isoasp 99.6 6.3E-15 2.2E-19 104.5 9.2 103 6-124 70-173 (235)
33 3ntv_A MW1564 protein; rossman 99.6 3.4E-15 1.1E-19 106.0 7.6 115 11-138 55-171 (232)
34 3dr5_A Putative O-methyltransf 99.6 3.3E-15 1.1E-19 105.6 7.4 118 11-138 37-158 (221)
35 3g5t_A Trans-aconitate 3-methy 99.6 5.2E-15 1.8E-19 108.3 8.7 102 28-138 35-144 (299)
36 2fhp_A Methylase, putative; al 99.6 7.2E-15 2.5E-19 100.1 8.8 99 13-121 29-128 (187)
37 2yqz_A Hypothetical protein TT 99.6 3.7E-15 1.3E-19 106.6 7.6 111 13-138 20-136 (263)
38 3mgg_A Methyltransferase; NYSG 99.6 4.9E-15 1.7E-19 107.0 8.1 99 27-138 35-137 (276)
39 1sui_A Caffeoyl-COA O-methyltr 99.6 1.3E-14 4.6E-19 104.0 10.2 117 16-138 67-185 (247)
40 3l8d_A Methyltransferase; stru 99.6 1.6E-15 5.4E-20 107.4 5.4 103 19-138 43-148 (242)
41 4dzr_A Protein-(glutamine-N5) 99.6 2.2E-15 7.6E-20 104.5 6.0 110 4-123 3-115 (215)
42 1ws6_A Methyltransferase; stru 99.6 7.1E-15 2.4E-19 98.7 8.3 115 13-138 25-142 (171)
43 4htf_A S-adenosylmethionine-de 99.6 6E-15 2.1E-19 107.2 8.3 98 28-138 67-168 (285)
44 1vbf_A 231AA long hypothetical 99.6 1.1E-14 3.6E-19 102.8 9.2 101 6-124 49-149 (231)
45 3dtn_A Putative methyltransfer 99.6 4.7E-15 1.6E-19 104.7 7.4 97 27-138 42-143 (234)
46 3tfw_A Putative O-methyltransf 99.6 6.5E-15 2.2E-19 105.5 8.2 114 16-138 51-165 (248)
47 3njr_A Precorrin-6Y methylase; 99.6 2E-14 6.7E-19 100.3 10.0 111 10-138 38-149 (204)
48 2gb4_A Thiopurine S-methyltran 99.6 9.6E-15 3.3E-19 105.2 8.6 103 28-138 67-186 (252)
49 3eey_A Putative rRNA methylase 99.6 5.8E-15 2E-19 101.8 7.1 84 26-119 19-103 (197)
50 4df3_A Fibrillarin-like rRNA/T 99.6 3.8E-15 1.3E-19 106.1 6.2 102 27-138 75-177 (233)
51 3r3h_A O-methyltransferase, SA 99.6 1.2E-15 4.2E-20 109.2 3.7 116 16-137 48-164 (242)
52 3gu3_A Methyltransferase; alph 99.6 7.9E-15 2.7E-19 106.8 8.1 113 12-138 6-121 (284)
53 2h00_A Methyltransferase 10 do 99.6 1.4E-14 4.9E-19 103.6 9.1 87 29-123 65-154 (254)
54 3ocj_A Putative exported prote 99.6 2.8E-15 9.4E-20 110.2 5.4 105 22-138 111-222 (305)
55 3gru_A Dimethyladenosine trans 99.6 4.3E-14 1.5E-18 104.0 11.2 100 5-122 27-127 (295)
56 2p7i_A Hypothetical protein; p 99.5 3.5E-15 1.2E-19 105.6 5.1 103 16-138 30-136 (250)
57 1nv8_A HEMK protein; class I a 99.5 1.5E-14 5.2E-19 105.8 8.6 100 6-121 99-204 (284)
58 3dxy_A TRNA (guanine-N(7)-)-me 99.5 9E-15 3.1E-19 103.2 7.0 101 28-138 33-145 (218)
59 1ve3_A Hypothetical protein PH 99.5 8.8E-15 3E-19 102.5 6.9 108 16-138 25-137 (227)
60 4fsd_A Arsenic methyltransfera 99.5 4.8E-15 1.6E-19 112.3 5.9 111 27-138 81-198 (383)
61 3ujc_A Phosphoethanolamine N-m 99.5 4.7E-15 1.6E-19 106.1 5.5 97 27-138 53-154 (266)
62 3vc1_A Geranyl diphosphate 2-C 99.5 1.1E-14 3.8E-19 107.3 7.6 98 27-138 115-216 (312)
63 3lpm_A Putative methyltransfer 99.5 8.3E-15 2.8E-19 105.5 6.7 85 27-122 46-132 (259)
64 2avd_A Catechol-O-methyltransf 99.5 2.2E-14 7.4E-19 101.0 8.7 88 27-119 67-155 (229)
65 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.3E-14 4.4E-19 101.5 7.4 100 28-138 40-151 (214)
66 3g07_A 7SK snRNA methylphospha 99.5 3.1E-15 1E-19 109.6 4.1 109 28-138 45-215 (292)
67 3g5l_A Putative S-adenosylmeth 99.5 1.7E-14 6E-19 102.9 7.8 95 28-138 43-140 (253)
68 2p35_A Trans-aconitate 2-methy 99.5 1E-14 3.5E-19 104.2 6.6 94 27-138 31-127 (259)
69 2hnk_A SAM-dependent O-methylt 99.5 2E-14 6.8E-19 102.2 8.0 121 10-137 43-175 (239)
70 3bkx_A SAM-dependent methyltra 99.5 1.8E-14 6.3E-19 103.9 7.7 102 27-137 41-153 (275)
71 3ggd_A SAM-dependent methyltra 99.5 1.7E-14 5.8E-19 102.5 7.4 107 19-138 46-158 (245)
72 2fca_A TRNA (guanine-N(7)-)-me 99.5 2.7E-14 9.4E-19 100.1 8.3 100 28-138 37-148 (213)
73 3c3y_A Pfomt, O-methyltransfer 99.5 4.1E-14 1.4E-18 100.8 9.3 116 16-137 58-175 (237)
74 1kpg_A CFA synthase;, cyclopro 99.5 2.7E-14 9.3E-19 103.7 8.4 96 27-138 62-163 (287)
75 1l3i_A Precorrin-6Y methyltran 99.5 3.5E-14 1.2E-18 96.7 8.4 113 10-138 16-129 (192)
76 2esr_A Methyltransferase; stru 99.5 1.5E-14 5.3E-19 98.0 6.6 93 16-121 19-112 (177)
77 2gpy_A O-methyltransferase; st 99.5 2.4E-14 8.2E-19 101.3 7.8 120 7-137 34-154 (233)
78 1dus_A MJ0882; hypothetical pr 99.5 2.4E-14 8.1E-19 97.7 7.3 106 14-137 39-151 (194)
79 2yxd_A Probable cobalt-precorr 99.5 6.5E-14 2.2E-18 94.8 9.4 91 10-118 18-109 (183)
80 2b25_A Hypothetical protein; s 99.5 3E-14 1E-18 106.0 8.4 124 6-138 84-214 (336)
81 2xvm_A Tellurite resistance pr 99.5 3.5E-14 1.2E-18 97.5 8.1 103 18-138 23-131 (199)
82 3orh_A Guanidinoacetate N-meth 99.5 1.5E-14 5.2E-19 103.0 6.4 100 28-139 59-166 (236)
83 3fpf_A Mtnas, putative unchara 99.5 5.7E-14 2E-18 103.1 9.4 98 26-138 119-217 (298)
84 3evz_A Methyltransferase; NYSG 99.5 4.1E-14 1.4E-18 99.7 8.4 86 26-124 52-138 (230)
85 3ou2_A SAM-dependent methyltra 99.5 2.1E-14 7.1E-19 99.9 6.7 103 16-138 34-141 (218)
86 2b3t_A Protein methyltransfera 99.5 2E-13 6.7E-18 99.1 12.0 101 7-122 87-189 (276)
87 3cbg_A O-methyltransferase; cy 99.5 3.5E-14 1.2E-18 100.7 7.6 115 17-137 61-176 (232)
88 3pfg_A N-methyltransferase; N, 99.5 1.9E-14 6.4E-19 103.4 6.1 103 16-138 37-146 (263)
89 4dcm_A Ribosomal RNA large sub 99.5 3.1E-14 1.1E-18 107.9 7.4 108 18-138 213-329 (375)
90 1zq9_A Probable dimethyladenos 99.5 2E-13 6.8E-18 99.9 11.4 100 5-122 5-106 (285)
91 2nxc_A L11 mtase, ribosomal pr 99.5 1.7E-14 6E-19 103.7 5.7 106 16-138 107-213 (254)
92 1zx0_A Guanidinoacetate N-meth 99.5 5.2E-14 1.8E-18 99.8 7.9 99 27-138 58-165 (236)
93 3dli_A Methyltransferase; PSI- 99.5 8.5E-14 2.9E-18 98.7 8.6 94 26-139 38-136 (240)
94 3g89_A Ribosomal RNA small sub 99.5 4.6E-14 1.6E-18 101.4 7.1 98 28-137 79-178 (249)
95 2h1r_A Dimethyladenosine trans 99.5 1.1E-13 3.9E-18 101.8 9.3 100 5-123 19-120 (299)
96 2pxx_A Uncharacterized protein 99.5 2.7E-14 9.2E-19 99.1 5.6 91 18-123 31-121 (215)
97 2fk8_A Methoxy mycolic acid sy 99.5 8.3E-14 2.8E-18 102.7 8.4 96 27-138 88-189 (318)
98 3id6_C Fibrillarin-like rRNA/T 99.5 5.3E-14 1.8E-18 100.2 7.1 113 16-138 62-176 (232)
99 3sm3_A SAM-dependent methyltra 99.5 2.8E-14 9.6E-19 100.2 5.6 103 26-138 27-136 (235)
100 3hnr_A Probable methyltransfer 99.5 2.8E-14 9.5E-19 99.7 5.5 101 17-138 35-140 (220)
101 4azs_A Methyltransferase WBDD; 99.5 1.3E-13 4.3E-18 109.4 9.9 88 27-127 64-152 (569)
102 3lcc_A Putative methyl chlorid 99.5 1.5E-14 5E-19 102.3 3.9 95 29-138 66-166 (235)
103 2qe6_A Uncharacterized protein 99.5 2.9E-13 9.8E-18 98.5 10.8 102 29-138 77-191 (274)
104 2ex4_A Adrenal gland protein A 99.5 4.9E-14 1.7E-18 100.0 6.5 96 29-138 79-180 (241)
105 2aot_A HMT, histamine N-methyl 99.5 3.3E-14 1.1E-18 103.9 5.5 106 28-138 51-167 (292)
106 3c3p_A Methyltransferase; NP_9 99.5 6.1E-14 2.1E-18 97.7 6.6 99 28-137 55-154 (210)
107 2p8j_A S-adenosylmethionine-de 99.5 5.3E-14 1.8E-18 97.5 6.2 109 15-138 10-123 (209)
108 3mb5_A SAM-dependent methyltra 99.5 1.4E-13 4.9E-18 98.3 8.7 91 15-119 81-172 (255)
109 3bgv_A MRNA CAP guanine-N7 met 99.5 4.9E-14 1.7E-18 103.8 6.4 121 16-138 21-150 (313)
110 1xtp_A LMAJ004091AAA; SGPP, st 99.5 6.9E-14 2.4E-18 99.6 6.9 96 28-138 92-192 (254)
111 3bkw_A MLL3908 protein, S-aden 99.5 7.1E-14 2.4E-18 98.8 6.8 95 28-138 42-139 (243)
112 3ccf_A Cyclopropane-fatty-acyl 99.5 4.8E-14 1.6E-18 102.2 6.1 99 18-138 48-149 (279)
113 3thr_A Glycine N-methyltransfe 99.5 6.6E-14 2.2E-18 101.9 6.7 103 28-138 56-170 (293)
114 1u2z_A Histone-lysine N-methyl 99.5 1.9E-13 6.6E-18 105.1 9.5 115 13-138 228-354 (433)
115 1xdz_A Methyltransferase GIDB; 99.5 7E-14 2.4E-18 99.5 6.5 99 28-138 69-169 (240)
116 3uwp_A Histone-lysine N-methyl 99.5 1.3E-13 4.3E-18 105.3 8.2 118 13-138 159-283 (438)
117 3tma_A Methyltransferase; thum 99.5 2.5E-13 8.6E-18 101.8 9.9 109 16-138 192-312 (354)
118 3tqs_A Ribosomal RNA small sub 99.5 3.3E-13 1.1E-17 97.3 10.0 99 5-119 6-106 (255)
119 3fzg_A 16S rRNA methylase; met 99.5 7.1E-14 2.4E-18 96.5 6.2 97 26-137 46-146 (200)
120 1y8c_A S-adenosylmethionine-de 99.5 8E-14 2.7E-18 98.5 6.7 107 16-138 24-137 (246)
121 2vdw_A Vaccinia virus capping 99.5 5.4E-14 1.9E-18 103.7 5.8 108 29-138 48-164 (302)
122 2frn_A Hypothetical protein PH 99.5 7.5E-14 2.6E-18 101.7 6.4 97 26-137 122-219 (278)
123 1nt2_A Fibrillarin-like PRE-rR 99.5 8.7E-14 3E-18 97.5 6.4 101 27-138 55-156 (210)
124 3h2b_A SAM-dependent methyltra 99.5 4.5E-14 1.5E-18 97.6 4.9 90 30-138 42-136 (203)
125 1wy7_A Hypothetical protein PH 99.5 1E-12 3.6E-17 91.0 11.6 101 6-123 25-126 (207)
126 3m70_A Tellurite resistance pr 99.5 1.8E-13 6E-18 99.4 7.8 103 18-138 111-218 (286)
127 3m33_A Uncharacterized protein 99.5 6.3E-14 2.2E-18 98.8 5.2 92 26-138 45-137 (226)
128 3dmg_A Probable ribosomal RNA 99.5 7.5E-14 2.6E-18 106.0 6.0 78 28-121 232-310 (381)
129 2fpo_A Methylase YHHF; structu 99.4 5.1E-13 1.8E-17 92.8 9.7 92 16-121 42-134 (202)
130 2ozv_A Hypothetical protein AT 99.4 9.4E-14 3.2E-18 100.2 6.0 91 27-122 34-128 (260)
131 3q87_B N6 adenine specific DNA 99.4 2E-13 6.9E-18 92.5 7.3 91 9-125 4-94 (170)
132 3iv6_A Putative Zn-dependent a 99.4 3.9E-14 1.3E-18 102.5 3.9 108 13-138 31-143 (261)
133 3lec_A NADB-rossmann superfami 99.4 4E-13 1.4E-17 95.4 9.0 83 23-117 15-98 (230)
134 3kr9_A SAM-dependent methyltra 99.4 4.1E-13 1.4E-17 95.2 8.9 84 22-117 8-92 (225)
135 3i9f_A Putative type 11 methyl 99.4 3.7E-14 1.3E-18 95.5 3.4 90 27-138 15-107 (170)
136 3ege_A Putative methyltransfer 99.4 8.3E-14 2.8E-18 100.2 5.4 103 13-138 20-125 (261)
137 3gnl_A Uncharacterized protein 99.4 4.2E-13 1.4E-17 96.1 8.9 82 23-116 15-97 (244)
138 3fut_A Dimethyladenosine trans 99.4 6.8E-13 2.3E-17 96.5 10.0 97 5-120 24-121 (271)
139 1ne2_A Hypothetical protein TA 99.4 8.7E-13 3E-17 91.1 10.1 97 7-124 28-125 (200)
140 2ift_A Putative methylase HI07 99.4 8.3E-13 2.8E-17 91.7 9.9 94 16-120 41-136 (201)
141 3bxo_A N,N-dimethyltransferase 99.4 2.7E-13 9.3E-18 95.6 7.5 103 16-138 27-136 (239)
142 3d2l_A SAM-dependent methyltra 99.4 1.6E-13 5.5E-18 97.0 6.2 104 18-138 22-132 (243)
143 1g8a_A Fibrillarin-like PRE-rR 99.4 2E-13 7E-18 96.0 6.7 102 27-138 71-173 (227)
144 3htx_A HEN1; HEN1, small RNA m 99.4 3.8E-13 1.3E-17 109.7 8.9 113 16-136 710-828 (950)
145 3e23_A Uncharacterized protein 99.4 7.9E-14 2.7E-18 97.0 4.2 92 26-138 40-136 (211)
146 3uzu_A Ribosomal RNA small sub 99.4 2E-12 6.7E-17 94.4 11.7 102 5-118 19-123 (279)
147 3a27_A TYW2, uncharacterized p 99.4 5.1E-13 1.8E-17 97.0 8.6 80 26-119 116-196 (272)
148 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.9E-13 6.7E-18 97.3 6.0 107 28-138 45-163 (235)
149 1ri5_A MRNA capping enzyme; me 99.4 2E-13 6.7E-18 99.2 6.1 100 27-138 62-169 (298)
150 2gs9_A Hypothetical protein TT 99.4 1.5E-13 5.1E-18 95.5 5.2 98 20-138 27-127 (211)
151 2ipx_A RRNA 2'-O-methyltransfe 99.4 3.6E-13 1.2E-17 95.3 7.1 102 27-138 75-177 (233)
152 2igt_A SAM dependent methyltra 99.4 1.3E-12 4.4E-17 97.5 10.1 110 18-138 143-267 (332)
153 1jsx_A Glucose-inhibited divis 99.4 3E-13 1E-17 93.7 6.1 107 16-137 51-159 (207)
154 3tm4_A TRNA (guanine N2-)-meth 99.4 2.5E-12 8.5E-17 97.3 11.4 93 15-122 206-299 (373)
155 1i9g_A Hypothetical protein RV 99.4 9.9E-13 3.4E-17 95.1 8.8 94 13-118 85-180 (280)
156 1o54_A SAM-dependent O-methylt 99.4 8.8E-13 3E-17 95.6 8.2 88 17-118 102-190 (277)
157 1o9g_A RRNA methyltransferase; 99.4 3.9E-13 1.3E-17 96.0 6.0 117 18-138 38-209 (250)
158 1qam_A ERMC' methyltransferase 99.4 3.3E-12 1.1E-16 91.4 10.5 99 5-121 7-106 (244)
159 2b78_A Hypothetical protein SM 99.4 1.3E-12 4.6E-17 99.1 8.9 83 28-119 211-295 (385)
160 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.1E-12 7.2E-17 92.1 9.4 91 16-118 85-175 (258)
161 2fyt_A Protein arginine N-meth 99.4 9.8E-13 3.3E-17 98.3 7.8 98 27-138 62-166 (340)
162 3cgg_A SAM-dependent methyltra 99.4 4.4E-13 1.5E-17 91.4 5.4 92 27-137 44-141 (195)
163 3mq2_A 16S rRNA methyltransfer 99.4 1.2E-13 4E-18 96.6 2.6 113 17-138 17-135 (218)
164 2vdv_E TRNA (guanine-N(7)-)-me 99.4 5.8E-13 2E-17 95.1 6.1 87 28-118 48-137 (246)
165 3giw_A Protein of unknown func 99.4 1E-12 3.4E-17 95.6 7.3 105 29-138 78-195 (277)
166 1qzz_A RDMB, aclacinomycin-10- 99.4 7.4E-13 2.5E-17 99.5 6.9 96 27-137 180-281 (374)
167 3gwz_A MMCR; methyltransferase 99.4 1.7E-12 5.7E-17 97.9 8.8 97 27-138 200-302 (369)
168 2pjd_A Ribosomal RNA small sub 99.4 2.3E-13 7.9E-18 101.7 3.9 105 16-138 185-298 (343)
169 1fbn_A MJ fibrillarin homologu 99.4 9.4E-13 3.2E-17 93.1 6.8 79 27-116 72-150 (230)
170 2g72_A Phenylethanolamine N-me 99.4 1.7E-13 5.7E-18 99.9 2.8 109 28-138 70-210 (289)
171 3i53_A O-methyltransferase; CO 99.4 8E-13 2.7E-17 98.1 6.1 95 29-138 169-269 (332)
172 3dp7_A SAM-dependent methyltra 99.4 8.3E-13 2.8E-17 99.4 6.2 99 28-138 178-282 (363)
173 3q7e_A Protein arginine N-meth 99.4 1.9E-12 6.5E-17 97.1 8.1 98 27-138 64-168 (349)
174 2bm8_A Cephalosporin hydroxyla 99.4 2.7E-13 9.4E-18 96.6 3.3 111 13-138 67-182 (236)
175 3gjy_A Spermidine synthase; AP 99.3 9.3E-13 3.2E-17 97.6 5.9 81 31-121 91-171 (317)
176 1yb2_A Hypothetical protein TA 99.3 1.3E-12 4.3E-17 94.8 6.5 81 27-118 108-188 (275)
177 3g2m_A PCZA361.24; SAM-depende 99.3 1E-12 3.6E-17 96.1 6.1 107 16-138 72-185 (299)
178 2kw5_A SLR1183 protein; struct 99.3 9.7E-13 3.3E-17 90.8 5.4 95 27-138 28-126 (202)
179 3r0q_C Probable protein argini 99.3 2.4E-12 8.3E-17 97.4 8.0 97 27-138 61-164 (376)
180 3mcz_A O-methyltransferase; ad 99.3 1.3E-12 4.6E-17 97.5 6.5 97 30-138 180-282 (352)
181 2a14_A Indolethylamine N-methy 99.3 2.1E-13 7.3E-18 98.3 1.9 108 27-138 53-192 (263)
182 1m6y_A S-adenosyl-methyltransf 99.3 1.3E-11 4.3E-16 91.0 11.3 94 15-118 14-107 (301)
183 1tw3_A COMT, carminomycin 4-O- 99.3 1.6E-12 5.5E-17 97.3 6.6 97 27-138 181-283 (360)
184 2y1w_A Histone-arginine methyl 99.3 4E-12 1.4E-16 95.2 8.6 97 27-138 48-150 (348)
185 1x19_A CRTF-related protein; m 99.3 4.9E-12 1.7E-16 94.8 9.0 97 27-138 188-290 (359)
186 3p2e_A 16S rRNA methylase; met 99.3 2E-13 7E-18 96.6 1.3 100 27-138 22-134 (225)
187 1uwv_A 23S rRNA (uracil-5-)-me 99.3 7.5E-12 2.6E-16 96.3 10.1 83 27-120 284-367 (433)
188 1qyr_A KSGA, high level kasuga 99.3 3.4E-12 1.2E-16 91.9 7.6 104 9-126 3-115 (252)
189 2avn_A Ubiquinone/menaquinone 99.3 1.2E-12 4.2E-17 93.9 5.3 100 19-138 44-147 (260)
190 3e8s_A Putative SAM dependent 99.3 2.3E-12 7.8E-17 89.9 6.3 101 19-138 44-147 (227)
191 1iy9_A Spermidine synthase; ro 99.3 2E-12 7E-17 94.0 6.2 86 28-121 74-160 (275)
192 3adn_A Spermidine synthase; am 99.3 8E-13 2.7E-17 97.1 4.0 87 28-121 82-169 (294)
193 2qm3_A Predicted methyltransfe 99.3 5.7E-12 2E-16 95.2 8.8 98 28-137 171-271 (373)
194 2r3s_A Uncharacterized protein 99.3 3.6E-12 1.2E-16 94.3 7.5 96 28-137 164-265 (335)
195 2f8l_A Hypothetical protein LM 99.3 8.6E-12 2.9E-16 93.2 9.5 105 5-123 104-215 (344)
196 2yvl_A TRMI protein, hypotheti 99.3 1.1E-11 3.8E-16 87.8 9.6 106 15-138 79-185 (248)
197 2ip2_A Probable phenazine-spec 99.3 2.5E-12 8.5E-17 95.4 6.4 95 28-138 167-267 (334)
198 1uir_A Polyamine aminopropyltr 99.3 1.4E-12 4.8E-17 96.6 5.0 87 28-121 76-163 (314)
199 1ixk_A Methyltransferase; open 99.3 3E-11 1E-15 89.4 12.1 80 27-118 116-196 (315)
200 3bwc_A Spermidine synthase; SA 99.3 2.9E-12 1E-16 94.4 6.7 104 28-138 94-205 (304)
201 1wzn_A SAM-dependent methyltra 99.3 4.1E-12 1.4E-16 90.4 7.2 95 28-138 40-140 (252)
202 1g6q_1 HnRNP arginine N-methyl 99.3 2.5E-12 8.5E-17 95.6 6.3 82 27-122 36-118 (328)
203 3ajd_A Putative methyltransfer 99.3 2.5E-11 8.4E-16 88.1 11.0 85 27-119 81-166 (274)
204 2jjq_A Uncharacterized RNA met 99.3 5.2E-12 1.8E-16 97.1 7.7 94 7-119 268-363 (425)
205 3c0k_A UPF0064 protein YCCW; P 99.3 1.1E-11 3.8E-16 94.3 9.4 85 28-119 219-303 (396)
206 3bzb_A Uncharacterized protein 99.3 1.1E-11 3.7E-16 90.3 8.8 104 28-134 78-191 (281)
207 2as0_A Hypothetical protein PH 99.3 7.9E-12 2.7E-16 95.0 8.3 84 27-119 215-299 (396)
208 3k6r_A Putative transferase PH 99.3 1.8E-11 6.2E-16 89.3 9.5 83 22-118 118-201 (278)
209 2i62_A Nicotinamide N-methyltr 99.3 7.7E-13 2.6E-17 94.6 2.2 107 28-138 55-193 (265)
210 3cc8_A Putative methyltransfer 99.3 1.3E-12 4.6E-17 91.2 3.3 92 28-138 31-125 (230)
211 1p91_A Ribosomal RNA large sub 99.3 5.7E-12 1.9E-16 90.6 6.6 86 18-120 73-159 (269)
212 1inl_A Spermidine synthase; be 99.3 3.2E-12 1.1E-16 93.9 5.3 86 28-121 89-175 (296)
213 1xj5_A Spermidine synthase 1; 99.3 7.2E-12 2.5E-16 93.6 7.2 85 28-119 119-204 (334)
214 1af7_A Chemotaxis receptor met 99.3 8.9E-12 3E-16 90.7 7.5 104 29-138 105-247 (274)
215 1wxx_A TT1595, hypothetical pr 99.3 7.5E-12 2.6E-16 94.8 7.3 80 29-119 209-289 (382)
216 4e2x_A TCAB9; kijanose, tetron 99.3 7.4E-13 2.5E-17 101.0 1.8 93 28-138 106-203 (416)
217 1ej0_A FTSJ; methyltransferase 99.3 3.4E-12 1.2E-16 85.4 4.8 83 27-125 20-104 (180)
218 2yx1_A Hypothetical protein MJ 99.3 8E-12 2.7E-16 93.3 7.3 76 26-119 192-268 (336)
219 3b3j_A Histone-arginine methyl 99.3 6.1E-12 2.1E-16 98.0 6.8 96 28-138 157-258 (480)
220 3ftd_A Dimethyladenosine trans 99.3 5.7E-12 1.9E-16 90.6 6.1 98 5-120 8-106 (249)
221 2o07_A Spermidine synthase; st 99.3 4E-12 1.4E-16 93.8 5.4 86 28-121 94-180 (304)
222 1mjf_A Spermidine synthase; sp 99.3 4.6E-12 1.6E-16 92.4 5.4 85 27-121 73-164 (281)
223 3bt7_A TRNA (uracil-5-)-methyl 99.3 5.3E-11 1.8E-15 89.8 11.3 95 16-119 199-305 (369)
224 2r6z_A UPF0341 protein in RSP 99.3 1.1E-11 3.9E-16 89.4 7.0 86 27-122 81-174 (258)
225 2okc_A Type I restriction enzy 99.2 5.9E-11 2E-15 91.6 10.8 106 5-123 149-267 (445)
226 2pt6_A Spermidine synthase; tr 99.2 7.3E-12 2.5E-16 93.0 5.1 84 28-119 115-199 (321)
227 2b2c_A Spermidine synthase; be 99.2 6.7E-12 2.3E-16 93.0 4.9 87 28-121 107-193 (314)
228 1yub_A Ermam, rRNA methyltrans 99.2 1.4E-12 4.8E-17 93.2 0.8 98 5-120 6-104 (245)
229 2i7c_A Spermidine synthase; tr 99.2 1E-11 3.4E-16 90.7 5.3 86 28-121 77-163 (283)
230 2ih2_A Modification methylase 99.2 2.6E-11 8.9E-16 92.3 7.6 95 5-122 17-111 (421)
231 2plw_A Ribosomal RNA methyltra 99.2 1.9E-11 6.7E-16 84.1 6.1 80 27-122 20-119 (201)
232 4hc4_A Protein arginine N-meth 99.2 4.7E-11 1.6E-15 90.4 8.6 76 28-118 82-158 (376)
233 3ll7_A Putative methyltransfer 99.2 8.1E-11 2.8E-15 89.9 9.7 84 27-120 91-174 (410)
234 3lst_A CALO1 methyltransferase 99.2 1.2E-11 4.1E-16 92.4 4.9 94 27-138 182-281 (348)
235 2frx_A Hypothetical protein YE 99.2 1.8E-10 6.1E-15 89.8 11.5 87 21-118 109-196 (479)
236 2b9e_A NOL1/NOP2/SUN domain fa 99.2 1.3E-10 4.3E-15 86.0 10.2 83 27-118 100-183 (309)
237 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.3E-10 4.3E-15 90.0 10.6 87 19-118 97-184 (456)
238 3hp7_A Hemolysin, putative; st 99.2 1.1E-11 3.7E-16 90.9 4.2 96 28-138 84-180 (291)
239 3ldu_A Putative methylase; str 99.2 1.2E-10 4.2E-15 88.4 10.0 82 27-120 193-312 (385)
240 2ar0_A M.ecoki, type I restric 99.2 1.3E-10 4.3E-15 91.8 10.3 106 5-123 147-275 (541)
241 3sso_A Methyltransferase; macr 99.2 1.3E-11 4.5E-16 93.9 4.4 97 27-139 214-320 (419)
242 3m6w_A RRNA methylase; rRNA me 99.2 1.7E-10 5.7E-15 89.5 10.2 86 19-118 93-179 (464)
243 3v97_A Ribosomal RNA large sub 99.2 3E-10 1E-14 92.2 12.0 81 28-119 538-619 (703)
244 1vlm_A SAM-dependent methyltra 99.2 2.9E-11 1E-15 84.5 5.3 93 19-137 38-133 (219)
245 3k0b_A Predicted N6-adenine-sp 99.2 1.9E-10 6.3E-15 87.6 10.1 83 27-121 199-319 (393)
246 3ldg_A Putative uncharacterize 99.2 3E-10 1E-14 86.3 10.9 83 27-121 192-312 (384)
247 4dmg_A Putative uncharacterize 99.2 4.7E-10 1.6E-14 85.4 11.8 78 27-119 212-290 (393)
248 4a6d_A Hydroxyindole O-methylt 99.1 7.9E-11 2.7E-15 88.4 7.2 96 28-138 178-278 (353)
249 2yxl_A PH0851 protein, 450AA l 99.1 5.2E-10 1.8E-14 86.5 10.4 82 27-118 257-339 (450)
250 2nyu_A Putative ribosomal RNA 99.1 1.2E-10 4.1E-15 79.7 5.7 78 27-120 20-108 (196)
251 3lkd_A Type I restriction-modi 99.1 5.4E-10 1.9E-14 88.2 10.1 108 5-120 195-308 (542)
252 2oyr_A UPF0341 protein YHIQ; a 99.1 2.6E-10 8.7E-15 82.3 7.6 88 27-122 84-177 (258)
253 1wg8_A Predicted S-adenosylmet 99.1 1.1E-09 3.9E-14 79.5 10.7 101 16-131 11-114 (285)
254 2dul_A N(2),N(2)-dimethylguano 99.1 2.4E-10 8.2E-15 86.6 7.2 84 29-118 47-140 (378)
255 1fp2_A Isoflavone O-methyltran 99.1 5.2E-11 1.8E-15 89.1 3.3 90 27-138 186-283 (352)
256 1fp1_D Isoliquiritigenin 2'-O- 99.1 2.7E-11 9.2E-16 91.3 1.7 90 27-138 207-301 (372)
257 3reo_A (ISO)eugenol O-methyltr 99.1 4.8E-11 1.7E-15 89.9 2.9 90 27-138 201-295 (368)
258 3lcv_B Sisomicin-gentamicin re 99.1 2.3E-10 8E-15 82.5 6.1 85 26-125 129-214 (281)
259 3opn_A Putative hemolysin; str 99.1 5.5E-11 1.9E-15 84.5 2.6 56 16-74 25-80 (232)
260 3frh_A 16S rRNA methylase; met 99.0 5.1E-10 1.7E-14 79.9 7.2 80 28-124 104-183 (253)
261 2cmg_A Spermidine synthase; tr 99.0 3E-11 1E-15 87.3 0.8 76 28-117 71-147 (262)
262 3p9c_A Caffeic acid O-methyltr 99.0 2E-10 6.8E-15 86.5 4.9 90 27-138 199-293 (364)
263 1sqg_A SUN protein, FMU protei 99.0 1.7E-09 5.9E-14 83.0 10.1 89 16-118 235-324 (429)
264 3axs_A Probable N(2),N(2)-dime 99.0 2.2E-10 7.6E-15 87.1 5.0 80 28-117 51-133 (392)
265 3khk_A Type I restriction-modi 99.0 3.3E-10 1.1E-14 89.5 5.8 104 5-121 223-341 (544)
266 2wa2_A Non-structural protein 99.0 1.2E-11 4E-16 90.2 -2.8 94 27-137 80-185 (276)
267 3v97_A Ribosomal RNA large sub 99.0 2.3E-09 7.8E-14 87.0 9.7 95 16-121 179-315 (703)
268 2oxt_A Nucleoside-2'-O-methylt 99.0 2.8E-11 9.5E-16 87.7 -1.9 93 27-137 72-177 (265)
269 2zfu_A Nucleomethylin, cerebra 99.0 1.5E-10 5.2E-15 80.4 1.5 87 18-138 57-146 (215)
270 1zg3_A Isoflavanone 4'-O-methy 98.9 2.6E-10 8.9E-15 85.4 2.9 89 28-138 192-288 (358)
271 3ufb_A Type I restriction-modi 98.9 3.2E-09 1.1E-13 83.7 8.8 106 5-120 195-313 (530)
272 2qfm_A Spermine synthase; sper 98.9 6.3E-09 2.1E-13 78.2 10.0 87 28-119 187-277 (364)
273 2p41_A Type II methyltransfera 98.9 8.1E-11 2.8E-15 86.8 -0.8 94 27-139 80-187 (305)
274 3dou_A Ribosomal RNA large sub 98.9 6.2E-09 2.1E-13 71.7 8.6 74 27-119 23-101 (191)
275 3s1s_A Restriction endonucleas 98.9 1.1E-08 3.6E-13 83.7 10.9 109 5-120 293-410 (878)
276 2ld4_A Anamorsin; methyltransf 98.8 4E-10 1.4E-14 76.1 0.3 82 27-138 10-96 (176)
277 3tka_A Ribosomal RNA small sub 98.8 4.6E-08 1.6E-12 72.7 9.7 91 16-118 46-137 (347)
278 2xyq_A Putative 2'-O-methyl tr 98.7 2.5E-09 8.5E-14 78.4 0.8 67 27-120 61-134 (290)
279 3cvo_A Methyltransferase-like 98.6 7E-08 2.4E-12 67.1 6.6 85 27-118 28-131 (202)
280 1i4w_A Mitochondrial replicati 98.6 5.1E-07 1.8E-11 67.7 9.9 83 5-96 29-116 (353)
281 4gqb_A Protein arginine N-meth 98.6 4.2E-07 1.4E-11 72.8 9.9 76 30-118 358-437 (637)
282 3o4f_A Spermidine synthase; am 98.6 5.6E-07 1.9E-11 65.9 9.8 86 27-118 81-166 (294)
283 2qy6_A UPF0209 protein YFCK; s 98.5 7.4E-08 2.5E-12 69.4 3.0 110 28-138 59-208 (257)
284 3ua3_A Protein arginine N-meth 98.4 5.5E-07 1.9E-11 72.7 7.2 85 30-120 410-506 (745)
285 2k4m_A TR8_protein, UPF0146 pr 98.4 6.5E-07 2.2E-11 59.0 6.2 50 15-66 21-71 (153)
286 2zig_A TTHA0409, putative modi 98.4 1.4E-06 4.7E-11 63.8 8.3 57 14-76 223-279 (297)
287 2efj_A 3,7-dimethylxanthine me 98.4 4.5E-07 1.5E-11 68.7 5.7 86 30-125 53-165 (384)
288 3b5i_A S-adenosyl-L-methionine 98.3 1.9E-06 6.5E-11 65.2 7.8 91 30-126 53-167 (374)
289 3c6k_A Spermine synthase; sper 98.3 6.1E-06 2.1E-10 62.3 9.5 87 28-118 204-293 (381)
290 2wk1_A NOVP; transferase, O-me 98.2 1.4E-06 4.9E-11 63.5 5.4 84 28-119 105-219 (282)
291 4fzv_A Putative methyltransfer 98.2 1.1E-05 3.9E-10 60.6 10.1 86 27-118 146-232 (359)
292 4auk_A Ribosomal RNA large sub 98.2 3.2E-06 1.1E-10 63.7 6.8 73 27-120 209-281 (375)
293 1m6e_X S-adenosyl-L-methionnin 98.1 5.6E-07 1.9E-11 67.7 1.0 89 29-124 51-154 (359)
294 1g60_A Adenine-specific methyl 98.1 1.6E-05 5.5E-10 57.0 8.4 56 15-76 201-256 (260)
295 3evf_A RNA-directed RNA polyme 97.9 7.2E-06 2.5E-10 59.3 4.0 99 27-139 72-180 (277)
296 2oo3_A Protein involved in cat 97.8 1E-05 3.4E-10 58.9 2.3 91 17-121 81-171 (283)
297 3g7u_A Cytosine-specific methy 97.4 0.00038 1.3E-08 52.6 7.1 78 31-120 3-82 (376)
298 3gcz_A Polyprotein; flavivirus 97.4 6E-05 2E-09 54.6 2.2 81 26-120 87-167 (282)
299 1boo_A Protein (N-4 cytosine-s 97.4 0.0005 1.7E-08 50.8 7.1 57 14-76 240-296 (323)
300 1g55_A DNA cytosine methyltran 97.4 0.00019 6.5E-09 53.5 4.8 76 30-119 2-78 (343)
301 1eg2_A Modification methylase 97.3 0.00085 2.9E-08 49.5 7.7 58 13-76 229-289 (319)
302 2py6_A Methyltransferase FKBM; 97.3 0.00076 2.6E-08 51.4 7.5 49 28-76 225-274 (409)
303 2px2_A Genome polyprotein [con 97.3 7.5E-05 2.6E-09 53.5 1.6 36 26-61 70-108 (269)
304 3r24_A NSP16, 2'-O-methyl tran 97.3 0.0016 5.6E-08 47.7 8.5 92 2-118 72-178 (344)
305 3p8z_A Mtase, non-structural p 97.2 0.00012 4E-09 52.0 2.2 78 26-118 75-153 (267)
306 2c7p_A Modification methylase 97.1 0.0015 5.1E-08 48.4 7.2 74 30-122 11-84 (327)
307 2qrv_A DNA (cytosine-5)-methyl 96.8 0.0089 3E-07 43.6 8.9 80 28-121 14-95 (295)
308 3ubt_Y Modification methylase 96.8 0.0043 1.5E-07 45.5 7.2 72 31-120 1-72 (331)
309 4h0n_A DNMT2; SAH binding, tra 96.6 0.0045 1.5E-07 46.0 6.0 76 31-120 4-80 (333)
310 3qv2_A 5-cytosine DNA methyltr 96.5 0.0048 1.6E-07 45.7 5.5 80 28-122 8-89 (327)
311 3lkz_A Non-structural protein 96.3 0.0036 1.2E-07 45.8 3.9 37 27-64 92-128 (321)
312 3eld_A Methyltransferase; flav 96.1 0.01 3.5E-07 43.3 5.3 38 26-64 78-115 (300)
313 3me5_A Cytosine-specific methy 95.8 0.014 4.8E-07 45.5 5.6 80 30-120 88-180 (482)
314 4ft4_B DNA (cytosine-5)-methyl 94.7 0.11 3.8E-06 42.5 7.7 46 29-74 211-260 (784)
315 4fn4_A Short chain dehydrogena 94.5 0.48 1.6E-05 33.6 9.7 83 29-118 6-93 (254)
316 3swr_A DNA (cytosine-5)-methyl 94.2 0.21 7.2E-06 42.2 8.3 80 30-120 540-629 (1002)
317 1zkd_A DUF185; NESG, RPR58, st 93.9 0.41 1.4E-05 36.2 8.7 44 31-74 82-131 (387)
318 4g65_A TRK system potassium up 93.8 0.52 1.8E-05 36.3 9.4 88 16-117 221-308 (461)
319 1rjd_A PPM1P, carboxy methyl t 93.7 1.1 3.9E-05 33.0 10.8 95 28-124 96-209 (334)
320 3llv_A Exopolyphosphatase-rela 93.7 0.61 2.1E-05 29.3 8.3 73 30-118 6-79 (141)
321 2vz8_A Fatty acid synthase; tr 93.6 0.015 5.1E-07 53.3 0.5 97 28-137 1239-1342(2512)
322 3o38_A Short chain dehydrogena 93.1 0.74 2.5E-05 32.1 8.7 85 29-119 21-111 (266)
323 2gn4_A FLAA1 protein, UDP-GLCN 93.0 0.51 1.8E-05 34.5 8.0 81 28-120 19-102 (344)
324 3fwz_A Inner membrane protein 93.0 0.44 1.5E-05 30.2 6.8 71 31-117 8-79 (140)
325 3pvc_A TRNA 5-methylaminomethy 92.9 0.15 5.2E-06 41.1 5.4 87 30-117 59-179 (689)
326 4fs3_A Enoyl-[acyl-carrier-pro 92.9 0.95 3.2E-05 31.7 9.0 87 28-119 4-96 (256)
327 3ucx_A Short chain dehydrogena 92.8 1.7 5.9E-05 30.3 10.5 84 28-118 9-97 (264)
328 1f8f_A Benzyl alcohol dehydrog 92.8 2.2 7.4E-05 31.4 12.0 46 26-72 187-233 (371)
329 3nzo_A UDP-N-acetylglucosamine 92.7 1.1 3.8E-05 33.5 9.6 88 29-120 34-123 (399)
330 3ek2_A Enoyl-(acyl-carrier-pro 92.4 1.1 3.7E-05 31.2 8.7 86 28-120 12-103 (271)
331 4f3n_A Uncharacterized ACR, CO 92.3 0.14 4.9E-06 39.3 4.2 46 30-75 138-187 (432)
332 3uog_A Alcohol dehydrogenase; 92.3 2.5 8.6E-05 31.1 11.0 45 26-72 186-231 (363)
333 4g81_D Putative hexonate dehyd 92.3 0.66 2.3E-05 32.9 7.5 86 28-120 7-97 (255)
334 3t4x_A Oxidoreductase, short c 92.3 1.2 4E-05 31.3 8.8 83 29-119 9-95 (267)
335 3ic5_A Putative saccharopine d 92.3 1.1 3.7E-05 26.8 8.1 73 30-119 5-79 (118)
336 3pk0_A Short-chain dehydrogena 92.2 1.2 4E-05 31.2 8.7 85 29-119 9-98 (262)
337 3o26_A Salutaridine reductase; 92.2 0.95 3.3E-05 32.0 8.3 84 29-119 11-101 (311)
338 3gaf_A 7-alpha-hydroxysteroid 92.1 1.5 5.3E-05 30.5 9.2 85 28-119 10-99 (256)
339 3vyw_A MNMC2; tRNA wobble urid 92.0 0.15 5.1E-06 37.4 3.9 103 31-138 98-221 (308)
340 3abi_A Putative uncharacterize 91.9 1.3 4.3E-05 32.8 8.9 72 29-118 15-86 (365)
341 3h7a_A Short chain dehydrogena 91.9 1.1 3.8E-05 31.2 8.2 83 29-119 6-93 (252)
342 3fpc_A NADP-dependent alcohol 91.9 2.5 8.5E-05 30.9 10.4 45 27-72 164-209 (352)
343 4fgs_A Probable dehydrogenase 91.7 1.5 5.2E-05 31.4 8.8 82 28-119 27-113 (273)
344 3ioy_A Short-chain dehydrogena 91.6 2.9 9.9E-05 30.2 10.4 85 29-119 7-97 (319)
345 3nyw_A Putative oxidoreductase 91.5 2 7E-05 29.7 9.3 87 29-119 6-97 (250)
346 3ps9_A TRNA 5-methylaminomethy 91.3 0.83 2.8E-05 36.6 7.8 86 31-117 68-187 (676)
347 4egf_A L-xylulose reductase; s 91.3 1.5 5.1E-05 30.7 8.4 85 29-119 19-108 (266)
348 3av4_A DNA (cytosine-5)-methyl 91.3 0.68 2.3E-05 40.4 7.6 81 29-120 850-940 (1330)
349 4eso_A Putative oxidoreductase 91.3 2.2 7.4E-05 29.7 9.2 81 29-119 7-92 (255)
350 3imf_A Short chain dehydrogena 91.3 1.4 4.6E-05 30.7 8.1 84 29-119 5-93 (257)
351 3tos_A CALS11; methyltransfera 91.2 3 0.0001 29.7 12.3 91 28-118 68-191 (257)
352 4g65_A TRK system potassium up 91.2 1.1 3.6E-05 34.6 8.0 72 30-116 3-75 (461)
353 3m6i_A L-arabinitol 4-dehydrog 91.2 2.7 9.2E-05 30.8 10.0 46 27-73 177-223 (363)
354 3f9i_A 3-oxoacyl-[acyl-carrier 91.1 1.8 6.2E-05 29.7 8.6 80 28-119 12-94 (249)
355 3s2e_A Zinc-containing alcohol 91.0 1.6 5.5E-05 31.7 8.6 45 26-72 163-208 (340)
356 3grk_A Enoyl-(acyl-carrier-pro 91.0 3 0.0001 29.7 9.9 86 28-120 29-120 (293)
357 3sju_A Keto reductase; short-c 91.0 2.2 7.4E-05 30.1 9.1 84 29-119 23-111 (279)
358 3rkr_A Short chain oxidoreduct 91.0 1.7 5.8E-05 30.3 8.5 84 29-119 28-116 (262)
359 4fc7_A Peroxisomal 2,4-dienoyl 90.9 3 0.0001 29.3 9.8 84 29-118 26-114 (277)
360 3lf2_A Short chain oxidoreduct 90.8 2.6 9E-05 29.4 9.4 87 28-119 6-97 (265)
361 3qiv_A Short-chain dehydrogena 90.8 1.5 5E-05 30.3 7.9 84 29-119 8-96 (253)
362 3rku_A Oxidoreductase YMR226C; 90.8 2.8 9.6E-05 29.8 9.6 86 29-119 32-125 (287)
363 3lyl_A 3-oxoacyl-(acyl-carrier 90.8 2.3 8E-05 29.1 8.9 84 29-119 4-92 (247)
364 3gms_A Putative NADPH:quinone 90.7 1.2 4.2E-05 32.4 7.8 45 26-72 141-187 (340)
365 3l77_A Short-chain alcohol deh 90.6 2.6 8.7E-05 28.7 9.0 85 30-120 2-91 (235)
366 3tsc_A Putative oxidoreductase 90.6 2.3 7.9E-05 29.9 8.9 84 29-119 10-111 (277)
367 2yut_A Putative short-chain ox 90.6 2.6 8.8E-05 27.9 8.8 73 32-119 2-76 (207)
368 3f1l_A Uncharacterized oxidore 90.5 3 0.0001 28.8 9.4 85 28-119 10-102 (252)
369 1pqw_A Polyketide synthase; ro 90.4 1.6 5.6E-05 28.9 7.7 44 26-71 35-80 (198)
370 3sx2_A Putative 3-ketoacyl-(ac 90.4 3 0.0001 29.2 9.3 85 29-120 12-113 (278)
371 2dph_A Formaldehyde dismutase; 90.4 1.2 4.1E-05 33.2 7.6 46 26-72 182-228 (398)
372 1xu9_A Corticosteroid 11-beta- 90.0 1.8 6.1E-05 30.5 7.9 82 29-117 27-114 (286)
373 4dry_A 3-oxoacyl-[acyl-carrier 90.0 2 6.7E-05 30.5 8.1 84 29-119 32-121 (281)
374 3awd_A GOX2181, putative polyo 90.0 2.5 8.7E-05 29.0 8.6 84 29-119 12-100 (260)
375 3tjr_A Short chain dehydrogena 90.0 1.8 6E-05 31.0 7.9 86 28-120 29-119 (301)
376 3pgx_A Carveol dehydrogenase; 89.7 3.6 0.00012 28.9 9.3 85 28-119 13-115 (280)
377 3v8b_A Putative dehydrogenase, 89.7 3 0.0001 29.5 8.9 84 29-119 27-115 (283)
378 4b7c_A Probable oxidoreductase 89.6 1.2 4.2E-05 32.3 6.9 46 26-73 146-193 (336)
379 4ibo_A Gluconate dehydrogenase 89.6 1.8 6E-05 30.5 7.6 86 28-120 24-114 (271)
380 4eye_A Probable oxidoreductase 89.5 4.5 0.00015 29.4 9.9 45 26-72 156-202 (342)
381 2ae2_A Protein (tropinone redu 89.5 2.8 9.5E-05 29.1 8.5 84 29-119 8-97 (260)
382 1kol_A Formaldehyde dehydrogen 89.5 2.3 7.7E-05 31.7 8.4 46 26-72 182-228 (398)
383 1yb1_A 17-beta-hydroxysteroid 89.3 3.7 0.00013 28.7 9.1 84 29-119 30-118 (272)
384 2qq5_A DHRS1, dehydrogenase/re 89.3 3.2 0.00011 28.8 8.7 81 30-117 5-91 (260)
385 3ftp_A 3-oxoacyl-[acyl-carrier 89.3 2.7 9.3E-05 29.5 8.4 84 29-119 27-115 (270)
386 3k31_A Enoyl-(acyl-carrier-pro 89.3 2.1 7.2E-05 30.5 7.8 84 29-119 29-118 (296)
387 2eih_A Alcohol dehydrogenase; 89.2 4.7 0.00016 29.3 9.9 45 26-72 163-209 (343)
388 3v2h_A D-beta-hydroxybutyrate 89.2 3.9 0.00013 28.8 9.2 85 29-119 24-114 (281)
389 3l4b_C TRKA K+ channel protien 89.2 1.9 6.6E-05 29.2 7.3 72 31-117 1-73 (218)
390 3ged_A Short-chain dehydrogena 89.1 2.2 7.6E-05 30.0 7.7 77 31-118 3-84 (247)
391 1fmc_A 7 alpha-hydroxysteroid 89.1 3.4 0.00012 28.2 8.7 84 29-119 10-98 (255)
392 3i1j_A Oxidoreductase, short c 89.1 3 0.0001 28.5 8.3 84 29-119 13-104 (247)
393 3tox_A Short chain dehydrogena 89.1 1.5 5.2E-05 31.1 6.9 84 29-119 7-95 (280)
394 3tfo_A Putative 3-oxoacyl-(acy 89.1 3 0.0001 29.3 8.5 83 30-119 4-91 (264)
395 3gvc_A Oxidoreductase, probabl 89.0 3.2 0.00011 29.3 8.6 81 29-119 28-113 (277)
396 3op4_A 3-oxoacyl-[acyl-carrier 89.0 3.4 0.00012 28.5 8.6 81 29-119 8-93 (248)
397 1xg5_A ARPG836; short chain de 88.9 3.2 0.00011 29.0 8.6 85 29-119 31-121 (279)
398 3rd5_A Mypaa.01249.C; ssgcid, 88.9 3 0.0001 29.5 8.5 79 29-119 15-96 (291)
399 3rih_A Short chain dehydrogena 88.9 1.7 5.7E-05 31.2 7.1 85 29-119 40-129 (293)
400 1ae1_A Tropinone reductase-I; 88.7 3.5 0.00012 28.9 8.6 84 29-119 20-109 (273)
401 3enk_A UDP-glucose 4-epimerase 88.7 0.79 2.7E-05 33.0 5.3 83 30-119 5-88 (341)
402 3ip1_A Alcohol dehydrogenase, 88.7 2.9 0.0001 31.2 8.6 45 27-72 211-256 (404)
403 3jyn_A Quinone oxidoreductase; 88.5 3.3 0.00011 29.8 8.6 44 27-72 138-183 (325)
404 1y1p_A ARII, aldehyde reductas 88.4 3.5 0.00012 29.4 8.6 83 28-119 9-93 (342)
405 1pl8_A Human sorbitol dehydrog 88.4 1.2 4.1E-05 32.7 6.2 45 27-72 169-214 (356)
406 4dqx_A Probable oxidoreductase 88.3 3.9 0.00014 28.8 8.7 82 28-119 25-111 (277)
407 3jv7_A ADH-A; dehydrogenase, n 88.3 2.1 7.2E-05 31.1 7.4 46 26-72 168-214 (345)
408 1id1_A Putative potassium chan 88.2 3.5 0.00012 26.2 8.1 74 31-117 4-79 (153)
409 3svt_A Short-chain type dehydr 88.2 4.6 0.00016 28.3 9.0 86 29-119 10-101 (281)
410 3uve_A Carveol dehydrogenase ( 88.1 4.7 0.00016 28.3 9.0 85 29-120 10-115 (286)
411 1vl8_A Gluconate 5-dehydrogena 88.1 4.5 0.00015 28.3 8.9 86 28-119 19-109 (267)
412 3r1i_A Short-chain type dehydr 88.1 2.5 8.7E-05 29.8 7.6 85 28-119 30-119 (276)
413 3pxx_A Carveol dehydrogenase; 88.0 5 0.00017 28.1 9.1 84 29-119 9-109 (287)
414 1zk4_A R-specific alcohol dehy 88.0 2.6 9E-05 28.8 7.5 83 29-119 5-92 (251)
415 4da9_A Short-chain dehydrogena 87.9 5.3 0.00018 28.1 9.2 84 29-119 28-117 (280)
416 3ruf_A WBGU; rossmann fold, UD 87.9 2.5 8.6E-05 30.4 7.6 82 29-119 24-110 (351)
417 4gkb_A 3-oxoacyl-[acyl-carrier 87.9 2.4 8E-05 30.0 7.2 84 28-119 5-93 (258)
418 3qwb_A Probable quinone oxidor 87.8 3.7 0.00013 29.7 8.4 45 26-72 145-191 (334)
419 3oec_A Carveol dehydrogenase ( 87.8 4.6 0.00016 29.1 8.9 84 29-119 45-145 (317)
420 3l9w_A Glutathione-regulated p 87.6 1.7 5.7E-05 33.0 6.7 73 30-118 4-77 (413)
421 1yb5_A Quinone oxidoreductase; 87.5 4.7 0.00016 29.5 8.9 45 26-72 167-213 (351)
422 3c85_A Putative glutathione-re 87.5 3.1 0.00011 27.2 7.3 72 30-117 39-113 (183)
423 1w6u_A 2,4-dienoyl-COA reducta 87.5 3.4 0.00012 29.2 8.0 85 29-119 25-114 (302)
424 2rhc_B Actinorhodin polyketide 87.5 5.7 0.00019 27.9 9.1 84 29-119 21-109 (277)
425 3edm_A Short chain dehydrogena 87.5 5.1 0.00017 27.8 8.8 83 29-118 7-95 (259)
426 1uuf_A YAHK, zinc-type alcohol 87.5 1.1 3.6E-05 33.3 5.4 45 26-72 191-236 (369)
427 3t7c_A Carveol dehydrogenase; 87.5 5.4 0.00018 28.4 9.0 84 29-119 27-127 (299)
428 1vj0_A Alcohol dehydrogenase, 87.4 4.9 0.00017 29.7 9.1 45 27-72 193-238 (380)
429 1e3j_A NADP(H)-dependent ketos 87.4 1.4 4.9E-05 32.2 6.1 44 27-72 166-210 (352)
430 1v3u_A Leukotriene B4 12- hydr 87.4 3.9 0.00013 29.5 8.4 43 26-70 142-186 (333)
431 2jah_A Clavulanic acid dehydro 87.4 4.7 0.00016 27.7 8.5 84 29-119 6-94 (247)
432 3ai3_A NADPH-sorbose reductase 87.4 4.8 0.00017 27.8 8.6 85 29-119 6-95 (263)
433 3grp_A 3-oxoacyl-(acyl carrier 87.4 4.1 0.00014 28.5 8.2 81 29-119 26-111 (266)
434 3two_A Mannitol dehydrogenase; 87.3 0.78 2.7E-05 33.6 4.6 45 26-72 173-218 (348)
435 4dmm_A 3-oxoacyl-[acyl-carrier 87.2 5.4 0.00018 27.9 8.8 85 29-120 27-117 (269)
436 4e6p_A Probable sorbitol dehyd 87.2 5.7 0.00019 27.5 9.1 81 29-119 7-92 (259)
437 1zem_A Xylitol dehydrogenase; 87.1 5.8 0.0002 27.5 9.1 84 29-119 6-94 (262)
438 3oid_A Enoyl-[acyl-carrier-pro 87.1 5.2 0.00018 27.8 8.7 84 29-119 3-92 (258)
439 2b4q_A Rhamnolipids biosynthes 87.1 3.6 0.00012 29.0 7.8 83 29-119 28-115 (276)
440 3a28_C L-2.3-butanediol dehydr 87.1 4.8 0.00017 27.8 8.4 83 30-119 2-91 (258)
441 1wma_A Carbonyl reductase [NAD 87.0 4.7 0.00016 27.7 8.4 83 29-118 3-91 (276)
442 2bgk_A Rhizome secoisolaricire 87.0 4.2 0.00014 28.2 8.1 82 29-118 15-101 (278)
443 1iy8_A Levodione reductase; ox 87.0 5.9 0.0002 27.5 9.0 86 29-119 12-102 (267)
444 2pnf_A 3-oxoacyl-[acyl-carrier 86.9 5.2 0.00018 27.1 8.5 85 29-119 6-95 (248)
445 1yxm_A Pecra, peroxisomal tran 86.9 4.8 0.00016 28.4 8.5 89 29-119 17-110 (303)
446 2aef_A Calcium-gated potassium 86.7 4.3 0.00015 27.7 7.9 72 29-117 8-79 (234)
447 3cxt_A Dehydrogenase with diff 86.7 4.4 0.00015 28.8 8.2 84 29-119 33-121 (291)
448 1lnq_A MTHK channels, potassiu 86.7 1.9 6.6E-05 31.3 6.4 71 30-117 115-185 (336)
449 4ina_A Saccharopine dehydrogen 86.7 3.3 0.00011 31.2 7.8 78 31-118 2-85 (405)
450 3l6e_A Oxidoreductase, short-c 86.7 5.4 0.00019 27.2 8.5 80 30-119 3-87 (235)
451 3ppi_A 3-hydroxyacyl-COA dehyd 86.6 6.3 0.00021 27.5 8.9 79 29-117 29-111 (281)
452 3dii_A Short-chain dehydrogena 86.5 4.1 0.00014 28.0 7.8 78 31-119 3-85 (247)
453 1lss_A TRK system potassium up 86.5 3.9 0.00013 25.0 8.6 74 30-118 4-78 (140)
454 1xq1_A Putative tropinone redu 86.4 3.7 0.00013 28.4 7.5 83 29-118 13-101 (266)
455 3zv4_A CIS-2,3-dihydrobiphenyl 86.3 5.2 0.00018 28.1 8.4 81 29-119 4-89 (281)
456 3n74_A 3-ketoacyl-(acyl-carrie 86.2 3.6 0.00012 28.4 7.4 81 29-119 8-93 (261)
457 3ijr_A Oxidoreductase, short c 86.2 6.5 0.00022 27.8 8.9 84 29-119 46-135 (291)
458 1sby_A Alcohol dehydrogenase; 86.0 3.4 0.00012 28.4 7.2 81 29-118 4-93 (254)
459 2wsb_A Galactitol dehydrogenas 86.0 6 0.00021 27.0 8.4 81 29-119 10-95 (254)
460 1cyd_A Carbonyl reductase; sho 86.0 6.2 0.00021 26.7 8.7 79 29-119 6-86 (244)
461 3oig_A Enoyl-[acyl-carrier-pro 86.0 6.1 0.00021 27.3 8.5 87 28-119 5-97 (266)
462 2c07_A 3-oxoacyl-(acyl-carrier 85.9 7.2 0.00025 27.4 9.3 83 30-119 44-131 (285)
463 1qor_A Quinone oxidoreductase; 85.7 6 0.0002 28.4 8.6 45 26-72 137-183 (327)
464 2nwq_A Probable short-chain de 85.7 7.4 0.00025 27.3 9.2 81 31-119 22-107 (272)
465 4imr_A 3-oxoacyl-(acyl-carrier 85.6 4.4 0.00015 28.5 7.6 84 29-119 32-119 (275)
466 1geg_A Acetoin reductase; SDR 85.6 6.9 0.00024 26.9 9.1 82 31-119 3-89 (256)
467 1wly_A CAAR, 2-haloacrylate re 85.6 8.2 0.00028 27.8 9.8 45 26-72 142-188 (333)
468 1xkq_A Short-chain reductase f 85.6 5.2 0.00018 28.0 8.0 86 29-119 5-96 (280)
469 3rwb_A TPLDH, pyridoxal 4-dehy 85.6 4.2 0.00014 28.0 7.5 81 29-119 5-90 (247)
470 3kzv_A Uncharacterized oxidore 85.5 7.1 0.00024 26.9 8.9 79 31-119 3-88 (254)
471 3d3w_A L-xylulose reductase; u 85.5 6.7 0.00023 26.6 8.7 79 29-119 6-86 (244)
472 2pd4_A Enoyl-[acyl-carrier-pro 85.4 7.3 0.00025 27.2 8.8 84 29-119 5-94 (275)
473 4dkj_A Cytosine-specific methy 85.4 1.9 6.5E-05 32.7 5.9 46 31-76 11-60 (403)
474 2x9g_A PTR1, pteridine reducta 85.3 6.3 0.00021 27.7 8.4 85 29-119 22-116 (288)
475 2p91_A Enoyl-[acyl-carrier-pro 85.2 5.8 0.0002 27.9 8.2 84 29-119 20-109 (285)
476 2uyo_A Hypothetical protein ML 85.2 8.9 0.0003 27.8 10.9 90 30-125 103-195 (310)
477 3ctm_A Carbonyl reductase; alc 84.9 4.3 0.00015 28.3 7.4 84 29-119 33-121 (279)
478 4dyv_A Short-chain dehydrogena 84.9 6.5 0.00022 27.6 8.3 81 29-119 27-112 (272)
479 2cfc_A 2-(R)-hydroxypropyl-COM 84.8 6.2 0.00021 26.8 8.0 82 30-118 2-89 (250)
480 4eez_A Alcohol dehydrogenase 1 84.7 7.6 0.00026 28.0 8.8 46 27-73 161-207 (348)
481 3tzq_B Short-chain type dehydr 84.7 4.2 0.00014 28.5 7.2 82 29-120 10-96 (271)
482 3iht_A S-adenosyl-L-methionine 84.7 2.2 7.6E-05 28.3 5.1 44 18-62 28-72 (174)
483 1p0f_A NADP-dependent alcohol 84.6 4.7 0.00016 29.6 7.7 46 26-72 188-234 (373)
484 3tpc_A Short chain alcohol deh 84.5 2.7 9.4E-05 29.1 6.1 82 29-120 6-92 (257)
485 2z1n_A Dehydrogenase; reductas 84.5 7 0.00024 27.0 8.2 85 29-119 6-95 (260)
486 4iin_A 3-ketoacyl-acyl carrier 84.5 7.6 0.00026 27.0 8.5 84 29-119 28-117 (271)
487 3asu_A Short-chain dehydrogena 84.4 8 0.00027 26.6 8.6 78 32-119 2-84 (248)
488 2j8z_A Quinone oxidoreductase; 84.3 8.1 0.00028 28.2 8.8 44 26-71 159-204 (354)
489 1nff_A Putative oxidoreductase 84.1 7.3 0.00025 27.0 8.2 81 29-119 6-91 (260)
490 2zat_A Dehydrogenase/reductase 84.1 7 0.00024 26.9 8.1 84 29-119 13-101 (260)
491 3qlj_A Short chain dehydrogena 84.1 5 0.00017 28.9 7.5 84 29-119 26-124 (322)
492 2gdz_A NAD+-dependent 15-hydro 84.1 6.8 0.00023 27.1 8.0 85 29-118 6-95 (267)
493 1xhl_A Short-chain dehydrogena 84.0 6.5 0.00022 27.9 8.0 86 29-119 25-116 (297)
494 2bd0_A Sepiapterin reductase; 84.0 6.6 0.00023 26.6 7.8 82 31-119 3-96 (244)
495 1yde_A Retinal dehydrogenase/r 83.7 6.9 0.00024 27.3 8.0 80 29-119 8-92 (270)
496 2uvd_A 3-oxoacyl-(acyl-carrier 83.7 7 0.00024 26.7 7.9 83 30-119 4-92 (246)
497 4hp8_A 2-deoxy-D-gluconate 3-d 83.7 3.9 0.00013 28.8 6.5 82 28-119 7-89 (247)
498 2h6e_A ADH-4, D-arabinose 1-de 83.4 2.3 7.8E-05 31.0 5.5 45 27-72 169-214 (344)
499 1cdo_A Alcohol dehydrogenase; 83.4 5 0.00017 29.5 7.4 46 26-72 189-235 (374)
500 1spx_A Short-chain reductase f 83.3 5.7 0.0002 27.7 7.4 86 29-119 5-96 (278)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.76 E-value=1.3e-18 Score=126.02 Aligned_cols=105 Identities=10% Similarity=0.226 Sum_probs=86.1
Q ss_pred HHhcccCCCCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhh
Q psy5757 21 SIIQPHLNENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 21 ~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
..+..+++++.+|||+|||+|..+..+++... +.++++|+|+|+.|++.|++++.. +. ..+++++++|+.+
T Consensus 62 ~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----~~~v~~~~~D~~~-- 134 (261)
T 4gek_A 62 MLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----PTPVDVIEGDIRD-- 134 (261)
T ss_dssp HHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCTTT--
T ss_pred HHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----CceEEEeeccccc--
Confidence 33344578999999999999999999999874 456999999999999999999887 44 4689999999654
Q ss_pred HHHhhhccCCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 99 ETVELMMKFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
.+.+.+|+|+++.++||+..+ ....++.++|+|.
T Consensus 135 ------~~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~ 173 (261)
T 4gek_A 135 ------IAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGA 173 (261)
T ss_dssp ------CCCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred ------ccccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcE
Confidence 235679999999999999765 3455888999885
No 2
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.68 E-value=1.9e-16 Score=110.25 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=90.6
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcccccc
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLT 83 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~ 83 (139)
+.++.++.+.....+.+.+. ..++.+|||+|||+|..+..+++... +++++|+++.+++.|++++.. +.
T Consensus 55 ~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~----- 124 (210)
T 3lbf_A 55 GQGQTISQPYMVARMTELLE--LTPQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDL----- 124 (210)
T ss_dssp TTSCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTC-----
T ss_pred CCCCEeCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCC-----
Confidence 34567778888888888885 57889999999999999999999843 999999999999999999987 44
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
.+++++.+|+.+.+. ..++||+|+++.++|++.+. .++.++|+|
T Consensus 125 -~~v~~~~~d~~~~~~------~~~~~D~i~~~~~~~~~~~~---~~~~L~pgG 168 (210)
T 3lbf_A 125 -HNVSTRHGDGWQGWQ------ARAPFDAIIVTAAPPEIPTA---LMTQLDEGG 168 (210)
T ss_dssp -CSEEEEESCGGGCCG------GGCCEEEEEESSBCSSCCTH---HHHTEEEEE
T ss_pred -CceEEEECCcccCCc------cCCCccEEEEccchhhhhHH---HHHhcccCc
Confidence 689999999765322 24679999999999988763 234444444
No 3
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.66 E-value=1.9e-16 Score=111.81 Aligned_cols=113 Identities=25% Similarity=0.364 Sum_probs=89.0
Q ss_pred hhhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCC-----CceEEEEeCCHHHHHHHHHHHHh-h
Q psy5757 4 VKIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNS-----TGQVIGIEHVPQLVNSSIQNILH-S 77 (139)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~-----~~~v~~~d~~~~~~~~a~~~~~~-~ 77 (139)
++++++++.+.....+++.+...+.++.+|||+|||+|..+..+++..+. .++++++|+++.+++.|++++.. +
T Consensus 59 ~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 138 (227)
T 1r18_A 59 IGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD 138 (227)
T ss_dssp EETTEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred cCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC
Confidence 35677889999999999999755788899999999999999999997642 35999999999999999998876 3
Q ss_pred ccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 78 NARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 78 ~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
. ..+...+++++.+|+.+.+. ...+||+|+++.+++++.
T Consensus 139 ~-~~~~~~~v~~~~~d~~~~~~------~~~~fD~I~~~~~~~~~~ 177 (227)
T 1r18_A 139 R-SMLDSGQLLIVEGDGRKGYP------PNAPYNAIHVGAAAPDTP 177 (227)
T ss_dssp H-HHHHHTSEEEEESCGGGCCG------GGCSEEEEEECSCBSSCC
T ss_pred c-cccCCCceEEEECCcccCCC------cCCCccEEEECCchHHHH
Confidence 0 00001689999999765322 125799999999988765
No 4
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=9.5e-16 Score=105.35 Aligned_cols=113 Identities=13% Similarity=-0.015 Sum_probs=83.5
Q ss_pred HHHHHHHHHhcccC-CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEE
Q psy5757 14 SAILTYLSIIQPHL-NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVA 91 (139)
Q Consensus 14 ~~~~~~~~~l~~~~-~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~ 91 (139)
.....+.+.+.... .++.+|||+|||+|..+..++... ..+++++|+|+.+++.|++++.. +. +++++++
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~ 99 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGL------SGATLRR 99 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTC------SCEEEEE
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCC------CceEEEE
Confidence 34455566664321 577899999999999999888754 33899999999999999999988 43 7899999
Q ss_pred ccchhhhHHHhhhccCCceeEEecCcccccc-cc---ceeeeee--eccCCCC
Q psy5757 92 LGMIKRIETVELMMKFDRYDFLPHAPAESWM-NI---PVCINYT--ATMPEGS 138 (139)
Q Consensus 92 ~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~-~~---p~~~~~~--~~~p~g~ 138 (139)
+|+.+... ..+.++||+|++++++|+. .+ ......+ .++|+|.
T Consensus 100 ~d~~~~~~----~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 100 GAVAAVVA----AGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp SCHHHHHH----HCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred ccHHHHHh----hccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 99765322 2235689999999999985 22 2233344 7888874
No 5
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.66 E-value=4.1e-16 Score=109.84 Aligned_cols=116 Identities=28% Similarity=0.365 Sum_probs=90.1
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcC----CCceEEEEeCCHHHHHHHHHHHHh-hcc
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMN----STGQVIGIEHVPQLVNSSIQNILH-SNA 79 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~----~~~~v~~~d~~~~~~~~a~~~~~~-~~~ 79 (139)
+.++.++.+.....+++.+...+.++.+|||+|||+|..+..+++... +.++++++|+++.+++.|++++.. +.
T Consensus 56 ~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~- 134 (227)
T 2pbf_A 56 SHGVTISAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKP- 134 (227)
T ss_dssp ETTEEECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCG-
T ss_pred CCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCc-
Confidence 456778889988888998865578889999999999999999999875 567999999999999999999877 31
Q ss_pred ccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 80 RLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 80 ~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
..+...+++++.+|+.+.+.... ...++||+|+++.+++++.
T Consensus 135 ~~~~~~~v~~~~~d~~~~~~~~~--~~~~~fD~I~~~~~~~~~~ 176 (227)
T 2pbf_A 135 ELLKIDNFKIIHKNIYQVNEEEK--KELGLFDAIHVGASASELP 176 (227)
T ss_dssp GGGSSTTEEEEECCGGGCCHHHH--HHHCCEEEEEECSBBSSCC
T ss_pred cccccCCEEEEECChHhcccccC--ccCCCcCEEEECCchHHHH
Confidence 00112689999999766331100 1135799999999988764
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.65 E-value=2e-16 Score=113.50 Aligned_cols=106 Identities=15% Similarity=0.317 Sum_probs=84.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+++.+. ..++.+|||+|||+|.++..+++... +++++|+|+.+++.|++++.. +. ++++++++|+
T Consensus 26 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDA 94 (260)
T ss_dssp HHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC
T ss_pred HHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecH
Confidence 455666664 46788999999999999999999874 999999999999999999877 44 6899999996
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
.+ + +.+.++||+|+++.++||+.++... .++.++|+|.
T Consensus 95 ~~-l-----~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~ 135 (260)
T 1vl5_A 95 EQ-M-----PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQ 135 (260)
T ss_dssp -C-C-----CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred Hh-C-----CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCE
Confidence 54 1 2235689999999999999987533 3667777764
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=7.5e-16 Score=110.02 Aligned_cols=110 Identities=13% Similarity=0.111 Sum_probs=86.6
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEE
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVA 91 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~ 91 (139)
+.....++..+. +.++.+|||+|||+|..+..+++..+ ++++++|+++.+++.|++++.. ++ ..++++++
T Consensus 22 ~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~v~~~~ 92 (256)
T 1nkv_A 22 EEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGV-----SERVHFIH 92 (256)
T ss_dssp HHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEE
T ss_pred HHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEE
Confidence 334556666654 57889999999999999999999874 3899999999999999999887 54 35899999
Q ss_pred ccchhhhHHHhhhccCCceeEEecCccccccccce---eeeeeeccCCCC
Q psy5757 92 LGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 92 ~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+|+.+ +. . .++||+|++..++|++.++. ...++.++|+|.
T Consensus 93 ~d~~~-~~-----~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~ 135 (256)
T 1nkv_A 93 NDAAG-YV-----A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGI 135 (256)
T ss_dssp SCCTT-CC-----C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEE
T ss_pred CChHh-CC-----c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeE
Confidence 99654 11 1 46799999999999998763 333777777774
No 8
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.64 E-value=9.3e-16 Score=107.12 Aligned_cols=105 Identities=23% Similarity=0.381 Sum_probs=85.6
Q ss_pred hcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccC
Q psy5757 6 IGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTD 84 (139)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~ 84 (139)
.++.++.+.....+.+.+. ..++.+|||+|||+|..+..+++..++..+++++|+++.+++.+++++.. +.
T Consensus 56 ~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------ 127 (215)
T 2yxe_A 56 YGQTISAIHMVGMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------ 127 (215)
T ss_dssp TTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------
T ss_pred CCcEeCcHHHHHHHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------
Confidence 4556677887888888774 67888999999999999999999985556999999999999999999877 44
Q ss_pred CcEEEEEccchhhhHHHhhhccCCceeEEecCcccccccc
Q psy5757 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 85 ~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~ 124 (139)
.+++++.+|+.+.+. ..++||+|+++.++|++.+
T Consensus 128 ~~v~~~~~d~~~~~~------~~~~fD~v~~~~~~~~~~~ 161 (215)
T 2yxe_A 128 DNVIVIVGDGTLGYE------PLAPYDRIYTTAAGPKIPE 161 (215)
T ss_dssp TTEEEEESCGGGCCG------GGCCEEEEEESSBBSSCCH
T ss_pred CCeEEEECCcccCCC------CCCCeeEEEECCchHHHHH
Confidence 679999999644221 1357999999999998763
No 9
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.64 E-value=5.1e-17 Score=117.45 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=79.0
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
.+.++|......+.+|||+|||+|..+..+++... +|+|+|+|+.+++.|++ .++++++++|+.+
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~- 92 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALR-----------HPRVTYAVAPAED- 92 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCC-----------CTTEEEEECCTTC-
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhh-----------cCCceeehhhhhh-
Confidence 34555554456678999999999999999999875 99999999999987643 2689999999654
Q ss_pred hHHHhhhccCCceeEEecCccccccccce--eeeeeeccCCCC
Q psy5757 98 IETVELMMKFDRYDFLPHAPAESWMNIPV--CINYTATMPEGS 138 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~~~~~~~p~--~~~~~~~~p~g~ 138 (139)
+ +.+.++||+|++..++||+..+. ....+.++|+|.
T Consensus 93 ---~--~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~ 130 (257)
T 4hg2_A 93 ---T--GLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAV 130 (257)
T ss_dssp ---C--CCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEE
T ss_pred ---h--cccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCE
Confidence 2 23467899999999999987543 334778888874
No 10
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.64 E-value=5.4e-16 Score=108.42 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=86.1
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccch
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~ 95 (139)
..++..+. +.++.+|||+|||+|..+..+++..++..+++++|+++.+++.+++++.. +. ++++++.+|+.
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~ 98 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBTT
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEecccc
Confidence 45555554 57788999999999999999999986667999999999999999999887 54 68999999965
Q ss_pred hhhHHHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+ + ..+.++||+|+++.++|++.++... .++.++|+|.
T Consensus 99 ~-~-----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 138 (219)
T 3dh0_A 99 K-I-----PLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAY 138 (219)
T ss_dssp B-C-----SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEE
T ss_pred c-C-----CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeE
Confidence 4 1 1235679999999999999876432 3566666663
No 11
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.64 E-value=6.7e-16 Score=108.67 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=82.3
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. .++++++++|+.+.++.+....
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----QDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHGGGTTTTS
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----CCceEEEECCHHHHHHHHHHhc
Confidence 35678999999999999999999876577999999999999999999987 55 3579999999766444322111
Q ss_pred cCCceeEEecCccccccccceeee--eeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVCIN--YTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~~~--~~~~~p~g~ 138 (139)
..++||+|+++...++...+.... .+.++|+|.
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~ 165 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTV 165 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCE
T ss_pred CCCceEEEEEcCCcccchHHHHHHHhccccCCCeE
Confidence 225799999999877766543221 278888885
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.63 E-value=8e-16 Score=109.36 Aligned_cols=111 Identities=14% Similarity=0.167 Sum_probs=87.2
Q ss_pred cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEE
Q psy5757 11 GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKF 89 (139)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~ 89 (139)
+++......++.+. +.++.+|||+|||+|..+..+++... +++++|+++.+++.+++++.. +. +++++
T Consensus 5 ~~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~ 73 (239)
T 1xxl_A 5 HHHHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGV------ENVRF 73 (239)
T ss_dssp -CHHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTC------CSEEE
T ss_pred ccCCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCC------CCeEE
Confidence 34445566777775 68889999999999999999998874 999999999999999999877 44 68999
Q ss_pred EEccchhhhHHHhhhccCCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 90 VALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 90 ~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
+++|+.+ + +.+.++||+|+++.++||+.++.. ..++.++|+|.
T Consensus 74 ~~~d~~~-~-----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 119 (239)
T 1xxl_A 74 QQGTAES-L-----PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGR 119 (239)
T ss_dssp EECBTTB-C-----CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred Eeccccc-C-----CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcE
Confidence 9999644 2 223568999999999999987643 23566667663
No 13
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.62 E-value=2e-15 Score=106.23 Aligned_cols=112 Identities=29% Similarity=0.439 Sum_probs=87.5
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcccccc
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLT 83 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~ 83 (139)
.+++.++.+.....+++.+..++.++.+|||+|||+|..+..+++..++.++++++|+++.+++.+++++.. +. ..+.
T Consensus 53 ~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~ 131 (226)
T 1i1n_A 53 GFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDP-TLLS 131 (226)
T ss_dssp ETTEEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCT-HHHH
T ss_pred CCCceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc-cccC
Confidence 356778888888888888865577889999999999999999999876566999999999999999998876 21 0001
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
..+++++++|+.+... ..++||+|+++.+++++.
T Consensus 132 ~~~v~~~~~d~~~~~~------~~~~fD~i~~~~~~~~~~ 165 (226)
T 1i1n_A 132 SGRVQLVVGDGRMGYA------EEAPYDAIHVGAAAPVVP 165 (226)
T ss_dssp TSSEEEEESCGGGCCG------GGCCEEEEEECSBBSSCC
T ss_pred CCcEEEEECCcccCcc------cCCCcCEEEECCchHHHH
Confidence 2589999999654221 235799999998877654
No 14
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=2.2e-15 Score=104.61 Aligned_cols=113 Identities=17% Similarity=0.188 Sum_probs=88.9
Q ss_pred cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEE
Q psy5757 11 GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKF 89 (139)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~ 89 (139)
+.......++..+. ..++.+|||+|||+|..+..+++.. +.++++++|+++.+++.|++++.. +. +++++
T Consensus 24 ~~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~ 94 (204)
T 3e05_A 24 TKQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVA------RNVTL 94 (204)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTC------TTEEE
T ss_pred ChHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCC------CcEEE
Confidence 34444456666664 5788999999999999999999997 466999999999999999999887 44 78999
Q ss_pred EEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 90 VALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 90 ~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
+.+|+.+.+. ...+||+|+++.+++.........++.++|+|.
T Consensus 95 ~~~d~~~~~~------~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~ 137 (204)
T 3e05_A 95 VEAFAPEGLD------DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGV 137 (204)
T ss_dssp EECCTTTTCT------TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCE
T ss_pred EeCChhhhhh------cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeE
Confidence 9999755322 235699999999887555555666778888885
No 15
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=1.2e-15 Score=109.90 Aligned_cols=109 Identities=20% Similarity=0.190 Sum_probs=84.3
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEcc
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALG 93 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d 93 (139)
....++..+. .+.++.+|||+|||+|..+..+++. +.++++++|+++.+++.|++++.. +. .++++++++|
T Consensus 33 ~~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d 104 (267)
T 3kkz_A 33 VTLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGL-----QNRVTGIVGS 104 (267)
T ss_dssp HHHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECC
T ss_pred HHHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCC-----CcCcEEEEcC
Confidence 3444555554 3578899999999999999999998 345999999999999999999887 54 3579999999
Q ss_pred chhhhHHHhhhccCCceeEEecCccccccccce---eeeeeeccCCCC
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+.+ + +.+.++||+|+++.++|++ ++. ...++.++|+|.
T Consensus 105 ~~~-~-----~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~ 145 (267)
T 3kkz_A 105 MDD-L-----PFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGY 145 (267)
T ss_dssp TTS-C-----CCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEE
T ss_pred hhh-C-----CCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCE
Confidence 654 2 1235689999999999998 443 233667777764
No 16
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.61 E-value=3e-15 Score=106.28 Aligned_cols=107 Identities=16% Similarity=0.078 Sum_probs=83.2
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+...+.. ..++.+|||+|||+|..+..+++... +++++|+++.+++.|++++.. ++ .++++++++|+
T Consensus 66 ~~~l~~~~~~-~~~~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~ 136 (241)
T 3gdh_A 66 AEHIAGRVSQ-SFKCDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGI-----ADKIEFICGDF 136 (241)
T ss_dssp HHHHHHHHHH-HSCCSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCH
T ss_pred HHHHHHHhhh-ccCCCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCC-----CcCeEEEECCh
Confidence 4444444442 34788999999999999999999763 999999999999999999987 43 25899999996
Q ss_pred hhhhHHHhhhccCCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
.+ +. +.++||+|++++++|+..++.. ..++.++|+|.
T Consensus 137 ~~----~~---~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~ 176 (241)
T 3gdh_A 137 LL----LA---SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGF 176 (241)
T ss_dssp HH----HG---GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHH
T ss_pred HH----hc---ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcce
Confidence 54 21 2468999999999999877643 23566788873
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.61 E-value=2.7e-15 Score=110.00 Aligned_cols=96 Identities=16% Similarity=0.083 Sum_probs=81.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
++++.+|||+|||+|..+..+++..+ ++++++|+|+.+++.|+++... ++ ..+++++++|+.+ +
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~----~---- 134 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDS-----PRRKEVRIQGWEE----F---- 134 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCC-----SSCEEEEECCGGG----C----
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCHHH----c----
Confidence 47888999999999999999999864 4999999999999999999887 54 3589999999643 1
Q ss_pred cCCceeEEecCccccccccc------------eeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIP------------VCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p------------~~~~~~~~~p~g~ 138 (139)
.++||+|+++.++|++++| .....+.++|+|.
T Consensus 135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~ 178 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGR 178 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCE
T ss_pred -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcE
Confidence 4679999999999999776 2344788899885
No 18
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.61 E-value=1.6e-15 Score=108.36 Aligned_cols=110 Identities=18% Similarity=0.212 Sum_probs=84.4
Q ss_pred HHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEc
Q psy5757 14 SAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVAL 92 (139)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~ 92 (139)
.....++..+. .+.++.+|||+|||+|..+..+++..+. +++++|+++.+++.++++... ++ ..+++++++
T Consensus 32 ~~~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~ 103 (257)
T 3f4k_A 32 EATRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANC-----ADRVKGITG 103 (257)
T ss_dssp HHHHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEEC
T ss_pred HHHHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEEC
Confidence 33445555554 3567889999999999999999999853 999999999999999999887 55 346999999
Q ss_pred cchhhhHHHhhhccCCceeEEecCccccccccce---eeeeeeccCCCC
Q psy5757 93 GMIKRIETVELMMKFDRYDFLPHAPAESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 93 d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~p~g~ 138 (139)
|+.+ + +.+.++||+|+++.++|++ ++. ...++.++|+|.
T Consensus 104 d~~~-~-----~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~ 145 (257)
T 3f4k_A 104 SMDN-L-----PFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGF 145 (257)
T ss_dssp CTTS-C-----SSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEE
T ss_pred Chhh-C-----CCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcE
Confidence 9644 2 2235689999999999998 432 333666777764
No 19
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.61 E-value=2.4e-15 Score=111.32 Aligned_cols=102 Identities=20% Similarity=0.340 Sum_probs=83.6
Q ss_pred ccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCc
Q psy5757 8 AAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGH 86 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~ 86 (139)
+..+.+.....+++.+. ++++.+|||+|||+|.++..+++.....++|+++|+++++++.|++++.. +. .+
T Consensus 56 q~~~~~~~~~~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~ 127 (317)
T 1dl5_A 56 STSSQPSLMALFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------EN 127 (317)
T ss_dssp EEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CS
T ss_pred eeccCHHHHHHHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CC
Confidence 45556677778888775 67889999999999999999999885346799999999999999999887 54 67
Q ss_pred EEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 87 IKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 87 i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
++++.+|+.+.+. ..++||+|+++.++|++.
T Consensus 128 v~~~~~d~~~~~~------~~~~fD~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 128 VIFVCGDGYYGVP------EFSPYDVIFVTVGVDEVP 158 (317)
T ss_dssp EEEEESCGGGCCG------GGCCEEEEEECSBBSCCC
T ss_pred eEEEECChhhccc------cCCCeEEEEEcCCHHHHH
Confidence 9999999655221 235799999999999876
No 20
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.61 E-value=2e-15 Score=105.58 Aligned_cols=113 Identities=11% Similarity=0.178 Sum_probs=84.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+.+.+. ..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++.. ++.. ....+++++.+|+
T Consensus 18 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 18 MNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPR-NQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCH-HHHTTEEEEECCT
T ss_pred HHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCc-ccCcceEEEeCCc
Confidence 444555553 3577899999999999999999976 345999999999999999999875 3200 0012799999995
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
.. . ..+.++||+|+++.++|++.++ ....++.++|+|.
T Consensus 94 ~~-~-----~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 136 (217)
T 3jwh_A 94 TY-Q-----DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIV 136 (217)
T ss_dssp TS-C-----CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEE
T ss_pred cc-c-----cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEE
Confidence 43 1 1224679999999999999876 3444778888873
No 21
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.60 E-value=2.5e-15 Score=101.68 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=86.0
Q ss_pred cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEE
Q psy5757 11 GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKF 89 (139)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~ 89 (139)
+..++...+++.+. ..++.+|||+|||+|..+..+++.. +.++++++|+++.+++.|++++.. +. ..++ +
T Consensus 9 t~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~-~ 79 (178)
T 3hm2_A 9 TKQHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGV-----SDRI-A 79 (178)
T ss_dssp HHHHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTC-----TTSE-E
T ss_pred cHHHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCC-----CCCE-E
Confidence 34445566666664 5778899999999999999999987 456999999999999999999887 54 2378 8
Q ss_pred EEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 90 VALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 90 ~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
+.+|..+.++ ...++||+|+++.++|+ .......++.++|+|.
T Consensus 80 ~~~d~~~~~~-----~~~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~ 122 (178)
T 3hm2_A 80 VQQGAPRAFD-----DVPDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGR 122 (178)
T ss_dssp EECCTTGGGG-----GCCSCCSEEEECC-TTC-TTHHHHHHHTCCTTCE
T ss_pred EecchHhhhh-----ccCCCCCEEEECCcccH-HHHHHHHHHhcCCCCE
Confidence 8888654332 11267999999999988 4445555777888875
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.60 E-value=1.5e-15 Score=105.59 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=76.6
Q ss_pred CeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCc
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDR 109 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~ 109 (139)
.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++.. +. ..+++++++|+.+ + +.+.++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~-~-----~~~~~~ 111 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANL-----NDRIQIVQGDVHN-I-----PIEDNY 111 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECBTTB-C-----SSCTTC
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccc-----cCceEEEEcCHHH-C-----CCCccc
Confidence 39999999999999999998 345999999999999999999887 54 3589999999654 1 223568
Q ss_pred eeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 110 YDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 110 ~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
||+|+++.++|++.++.. ..++.++|+|.
T Consensus 112 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 143 (219)
T 3dlc_A 112 ADLIVSRGSVFFWEDVATAFREIYRILKSGGK 143 (219)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred ccEEEECchHhhccCHHHHHHHHHHhCCCCCE
Confidence 999999999999977643 23666677664
No 23
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.60 E-value=2.9e-15 Score=107.98 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++..+ ++++++|+|+.+++.++++... +. ..+++++.+|+.+ + +.
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~-~-----~~ 125 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGL-----ANRVTFSYADAMD-L-----PF 125 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-C-----CS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECcccc-C-----CC
Confidence 46788999999999999999999763 4999999999999999999877 54 3579999999654 1 22
Q ss_pred cCCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
+.++||+|+++.++||+.++.. ..++.++|+|.
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 161 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGT 161 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEE
T ss_pred CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeE
Confidence 3568999999999999987643 23666677764
No 24
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.60 E-value=3.4e-15 Score=104.87 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=88.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+.. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++++++|+
T Consensus 46 ~~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 119 (223)
T 3duw_A 46 QGKFLQLLVQ-IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----NDRVEVRTGLA 119 (223)
T ss_dssp HHHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCH
T ss_pred HHHHHHHHHH-hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCH
Confidence 4444544432 45678999999999999999999985567999999999999999999987 54 34699999998
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
.+.++.+... ..++||+|++....++.........+.++|+|.
T Consensus 120 ~~~~~~~~~~-~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~ 162 (223)
T 3duw_A 120 LDSLQQIENE-KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTV 162 (223)
T ss_dssp HHHHHHHHHT-TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCE
T ss_pred HHHHHHHHhc-CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcE
Confidence 7654443221 125699999988866655555566777888874
No 25
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=1.8e-15 Score=105.00 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=86.5
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+.+.+...+.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. +. .+++++.+|+
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~ 118 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGI------YDIALQKTSL 118 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC------CCCEEEESST
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEeccc
Confidence 455666666556788999999999999999988753 34999999999999999999887 44 5599999996
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
.+. ..++||+|+++.++|++.......++.++|+|.
T Consensus 119 ~~~--------~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~ 154 (205)
T 3grz_A 119 LAD--------VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQ 154 (205)
T ss_dssp TTT--------CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEE
T ss_pred ccc--------CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCE
Confidence 541 236799999999999887777777777788774
No 26
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.59 E-value=1.6e-15 Score=103.57 Aligned_cols=88 Identities=14% Similarity=0.142 Sum_probs=69.5
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
......++...++++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.|++++.. +. +++++++++.
T Consensus 9 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~~~ 79 (185)
T 3mti_A 9 IHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGI------ENTELILDGH 79 (185)
T ss_dssp HHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEESCG
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCcH
Confidence 444555555557889999999999999999999983 3999999999999999999987 54 7899999774
Q ss_pred hhhhHHHhhhccCCceeEEecCc
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAP 117 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~ 117 (139)
.+ +.. ...++||+|+++.
T Consensus 80 ~~-l~~----~~~~~fD~v~~~~ 97 (185)
T 3mti_A 80 EN-LDH----YVREPIRAAIFNL 97 (185)
T ss_dssp GG-GGG----TCCSCEEEEEEEE
T ss_pred HH-HHh----hccCCcCEEEEeC
Confidence 43 221 1246799999984
No 27
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.59 E-value=1.4e-15 Score=106.05 Aligned_cols=104 Identities=11% Similarity=-0.020 Sum_probs=77.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccc------cccCCcEEEEEccchhhhH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNAR------LLTDGHIKFVALGMIKRIE 99 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~------~~~~~~i~~~~~d~~~~~~ 99 (139)
+.++.+|||+|||+|..+..+++... +|+|+|+|+.+++.|+++... .... .....+++++++|+.+ ++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-l~ 95 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA-LT 95 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS-ST
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc-CC
Confidence 46788999999999999999999853 999999999999999887642 0000 0012578999999765 22
Q ss_pred HHhhhccCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 100 TVELMMKFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 100 ~~~~~~~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
.. ..++||+|+++.++|+++.+. ...++.++|+|.
T Consensus 96 ---~~-~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 96 ---AR-DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp ---HH-HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred ---cc-cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 11 015799999999999987542 345788888885
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=3.6e-15 Score=104.35 Aligned_cols=113 Identities=14% Similarity=0.229 Sum_probs=83.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+.+.+. ..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++.. ++.. ....+++++.+|+
T Consensus 18 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 18 LGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPE-MQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCH-HHHTTEEEEECCS
T ss_pred HHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhcccc-ccCcceEEEeCcc
Confidence 344445553 2567899999999999999999977 346999999999999999999876 3300 0012899999996
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
.. . ....++||+|+++.++|++.++ ....++.++|+|.
T Consensus 94 ~~-~-----~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 136 (219)
T 3jwg_A 94 VY-R-----DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTV 136 (219)
T ss_dssp SS-C-----CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEE
T ss_pred cc-c-----ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEE
Confidence 43 1 1224679999999999999876 2334777888773
No 29
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=4e-15 Score=104.53 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=81.5
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccch
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~ 95 (139)
..++..+.. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++++++|+.
T Consensus 53 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~ 126 (225)
T 3tr6_A 53 AQLLALLVK-LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----SDKIGLRLSPAK 126 (225)
T ss_dssp HHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHH
T ss_pred HHHHHHHHH-hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCceEEEeCCHH
Confidence 344444432 35678999999999999999999875567999999999999999999987 54 356999999976
Q ss_pred hhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
+.++.+......++||+|+++...+.........++.++|+|
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG 168 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGG 168 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE
T ss_pred HHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCc
Confidence 644433211111679999988764433333333445555555
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=4.6e-15 Score=108.31 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=80.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++..+ ++++++|+++.+++.++++... +. .++++++++|+.+ + +.
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~-~-----~~ 146 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGL-----ADNITVKYGSFLE-I-----PC 146 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTC-----TTTEEEEECCTTS-C-----SS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEEcCccc-C-----CC
Confidence 57788999999999999999999864 3999999999999999999877 54 3689999999654 1 22
Q ss_pred cCCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
+.++||+|++..++|++.++.. ..++.++|+|.
T Consensus 147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 182 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGV 182 (297)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeE
Confidence 3568999999999999987643 23666777764
No 31
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.59 E-value=1.6e-15 Score=105.85 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=78.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
..++.+|||+|||+|..+..+++... +++++|+++.+++.++++... ..+++++++|+.+. . +
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~-~------~ 111 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKR-------WSHISWAATDILQF-S------T 111 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTT-------CSSEEEEECCTTTC-C------C
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhccc-------CCCeEEEEcchhhC-C------C
Confidence 35667999999999999999999874 999999999999999998766 35899999996541 1 3
Q ss_pred CCceeEEecCccccccccc------eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIP------VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p------~~~~~~~~~p~g~ 138 (139)
.++||+|+++.++||+.++ ....++.++|+|.
T Consensus 112 ~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~ 149 (216)
T 3ofk_A 112 AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGH 149 (216)
T ss_dssp SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999987 3444677777774
No 32
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.59 E-value=6.3e-15 Score=104.54 Aligned_cols=103 Identities=22% Similarity=0.354 Sum_probs=83.6
Q ss_pred hcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccC
Q psy5757 6 IGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTD 84 (139)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~ 84 (139)
.++.++.+.....+++.+. ..++.+|||+|||+|..+..+++..+ .+++++|+++.+++.|++++.. +.
T Consensus 70 ~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~------ 139 (235)
T 1jg1_A 70 AGQTVSAPHMVAIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV------ 139 (235)
T ss_dssp TTCEECCHHHHHHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC------
T ss_pred CCceeccHHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC------
Confidence 4556677888888888884 67888999999999999999999984 4999999999999999999887 44
Q ss_pred CcEEEEEccchhhhHHHhhhccCCceeEEecCcccccccc
Q psy5757 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 85 ~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~ 124 (139)
.+++++.+|+...+. ....||+|+++.+++++.+
T Consensus 140 ~~v~~~~~d~~~~~~------~~~~fD~Ii~~~~~~~~~~ 173 (235)
T 1jg1_A 140 KNVHVILGDGSKGFP------PKAPYDVIIVTAGAPKIPE 173 (235)
T ss_dssp CSEEEEESCGGGCCG------GGCCEEEEEECSBBSSCCH
T ss_pred CCcEEEECCcccCCC------CCCCccEEEECCcHHHHHH
Confidence 679999999633222 1235999999999887764
No 33
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=3.4e-15 Score=105.96 Aligned_cols=115 Identities=17% Similarity=0.198 Sum_probs=84.3
Q ss_pred cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEE
Q psy5757 11 GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKF 89 (139)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~ 89 (139)
..+.....+...+. ..++.+|||+|||+|..+..+++.. +.++++++|+++.+++.|++++.. ++ .+++++
T Consensus 55 ~~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~ 126 (232)
T 3ntv_A 55 VDRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHF-----ENQVRI 126 (232)
T ss_dssp CCHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEE
T ss_pred cCHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEE
Confidence 34444444444443 4577899999999999999999965 467999999999999999999987 54 358999
Q ss_pred EEccchhhhH-HHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 90 VALGMIKRIE-TVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 90 ~~~d~~~~~~-~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
+++|+.+.++ .+ .++||+|+++.............++.++|+|.
T Consensus 127 ~~~d~~~~~~~~~-----~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~ 171 (232)
T 3ntv_A 127 IEGNALEQFENVN-----DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGL 171 (232)
T ss_dssp EESCGGGCHHHHT-----TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEE
T ss_pred EECCHHHHHHhhc-----cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeE
Confidence 9999766433 21 46799999887655544444444566666653
No 34
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.58 E-value=3.3e-15 Score=105.60 Aligned_cols=118 Identities=9% Similarity=0.089 Sum_probs=84.5
Q ss_pred cChHHHHHHHHHhcccCC--CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccC-Cc
Q psy5757 11 GGISAILTYLSIIQPHLN--ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTD-GH 86 (139)
Q Consensus 11 ~~~~~~~~~~~~l~~~~~--~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~-~~ 86 (139)
..+. ...++..+..... ++.+|||+|||+|..+..+++..++.++++++|+++.+++.|+++++. +. . ++
T Consensus 37 i~~~-~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~~ 110 (221)
T 3dr5_A 37 PDEM-TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----SPSR 110 (221)
T ss_dssp CCHH-HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----CGGG
T ss_pred CCHH-HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcCc
Confidence 3443 3444444442222 334999999999999999999886678999999999999999999988 54 3 58
Q ss_pred EEEEEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 87 IKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 87 i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
++++++|+.+.+.. ...++||+|++....+.........++.++|+|.
T Consensus 111 i~~~~gda~~~l~~----~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 158 (221)
T 3dr5_A 111 VRFLLSRPLDVMSR----LANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGA 158 (221)
T ss_dssp EEEECSCHHHHGGG----SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEE
T ss_pred EEEEEcCHHHHHHH----hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcE
Confidence 99999997664332 1246899999987755444444444566666653
No 35
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.58 E-value=5.2e-15 Score=108.31 Aligned_cols=102 Identities=15% Similarity=0.258 Sum_probs=78.7
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhh-ccccccCCcEEEEEccchhhhHHHhhhc-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHS-NARLLTDGHIKFVALGMIKRIETVELMM- 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~-~~~~~~~~~i~~~~~d~~~~~~~~~~~~- 105 (139)
.++.+|||+|||+|..+..+++...+..+++|+|+|+.+++.|++++... . ...+++++++|+.+ +. ...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~v~~~~~d~~~-~~---~~~~ 106 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD----TYKNVSFKISSSDD-FK---FLGA 106 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-----CCTTEEEEECCTTC-CG---GGCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC----CCCceEEEEcCHHh-CC---cccc
Confidence 57889999999999999999987645669999999999999999998762 0 13689999999665 22 111
Q ss_pred ---cCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 106 ---KFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 106 ---~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
..++||+|+++.++||+ ++... ..+.++|+|.
T Consensus 107 ~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~ 144 (299)
T 3g5t_A 107 DSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGT 144 (299)
T ss_dssp TTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEE
T ss_pred ccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcE
Confidence 12689999999999999 66432 2566666664
No 36
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.58 E-value=7.2e-15 Score=100.14 Aligned_cols=99 Identities=16% Similarity=0.124 Sum_probs=75.1
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEE
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVA 91 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~ 91 (139)
......+.+.+.. ..++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. +. .+++++++
T Consensus 29 ~~~~~~~~~~l~~-~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~ 100 (187)
T 2fhp_A 29 DKVKESIFNMIGP-YFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKE-----PEKFEVRK 100 (187)
T ss_dssp HHHHHHHHHHHCS-CCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEE
T ss_pred HHHHHHHHHHHHh-hcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCC-----CcceEEEE
Confidence 3345556666642 3577899999999999999988854 34999999999999999999887 43 35799999
Q ss_pred ccchhhhHHHhhhccCCceeEEecCccccc
Q psy5757 92 LGMIKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 92 ~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
+|+.+....+. ...++||+|+++++++.
T Consensus 101 ~d~~~~~~~~~--~~~~~fD~i~~~~~~~~ 128 (187)
T 2fhp_A 101 MDANRALEQFY--EEKLQFDLVLLDPPYAK 128 (187)
T ss_dssp SCHHHHHHHHH--HTTCCEEEEEECCCGGG
T ss_pred CcHHHHHHHHH--hcCCCCCEEEECCCCCc
Confidence 99766333221 12467999999999763
No 37
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.58 E-value=3.7e-15 Score=106.62 Aligned_cols=111 Identities=13% Similarity=0.053 Sum_probs=84.9
Q ss_pred hHHHHHHHHHh---cccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEE
Q psy5757 13 ISAILTYLSII---QPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKF 89 (139)
Q Consensus 13 ~~~~~~~~~~l---~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~ 89 (139)
......+.+.+ ...+.++.+|||+|||+|..+..+++... +++++|+|+.+++.+++++... ..++++
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~------~~~~~~ 90 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGV------DRKVQV 90 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTS------CTTEEE
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhcc------CCceEE
Confidence 34455666666 33467788999999999999999998743 9999999999999999987222 268999
Q ss_pred EEccchhhhHHHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 90 VALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 90 ~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+++|+.+ + +.+.++||+|+++.++||+.++... .++.++|+|.
T Consensus 91 ~~~d~~~-~-----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 91 VQADARA-I-----PLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp EESCTTS-C-----CSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEE
T ss_pred EEccccc-C-----CCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcE
Confidence 9999644 2 1235679999999999999876432 3666777764
No 38
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.58 E-value=4.9e-15 Score=107.03 Aligned_cols=99 Identities=17% Similarity=0.259 Sum_probs=81.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++.. +. ++++++.+|+.+ + ..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~-~-----~~ 101 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGI------KNVKFLQANIFS-L-----PF 101 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGG-C-----CS
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEccccc-C-----CC
Confidence 4678899999999999999999986 456999999999999999999887 44 689999999654 1 22
Q ss_pred cCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+.++||+|+++.++|++.++... ..+.++|+|.
T Consensus 102 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 137 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGT 137 (276)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcE
Confidence 35689999999999999887433 3666677664
No 39
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.58 E-value=1.3e-14 Score=104.03 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=85.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+.. ..++.+|||+|||+|+.+..+++..++.++++++|+++.+++.|++++.. +. .++++++++|+
T Consensus 67 ~~~ll~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----~~~i~~~~gda 140 (247)
T 1sui_A 67 EGQFLSMLLK-LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----DHKIDFREGPA 140 (247)
T ss_dssp HHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----GGGEEEEESCH
T ss_pred HHHHHHHHHH-hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCH
Confidence 3344444432 35668999999999999999999985567999999999999999999987 54 36899999998
Q ss_pred hhhhHHHhhhc-cCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 95 IKRIETVELMM-KFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~-~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
.+.++.+.... ..++||+|+++.............++.++|+|.
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 185 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGV 185 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCC
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeE
Confidence 76444331110 146799999887643333334445677788775
No 40
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.58 E-value=1.6e-15 Score=107.40 Aligned_cols=103 Identities=13% Similarity=0.291 Sum_probs=80.7
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
+...+..+++++.+|||+|||+|..+..+++... +++++|+++.+++.++++... .+++++++|+.+ +
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~-~ 110 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEG--------PDLSFIKGDLSS-L 110 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCB--------TTEEEEECBTTB-C
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhccc--------CCceEEEcchhc-C
Confidence 4455554567889999999999999999999843 999999999999999887533 689999999654 1
Q ss_pred HHHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 99 ETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+.+.++||+|+++.++||+.++... .++.++|+|.
T Consensus 111 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 148 (242)
T 3l8d_A 111 -----PFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGY 148 (242)
T ss_dssp -----SSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEE
T ss_pred -----CCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeE
Confidence 2235689999999999999877432 3566666663
No 41
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=2.2e-15 Score=104.48 Aligned_cols=110 Identities=13% Similarity=0.099 Sum_probs=64.0
Q ss_pred hhhcccccChHHHHHHHHHhcccC---CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccc
Q psy5757 4 VKIGAAIGGISAILTYLSIIQPHL---NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR 80 (139)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~ 80 (139)
+..+..++.+. ...+.+.+.+.+ .++.+|||+|||+|..+..+++.. +.++++++|+++.+++.|++++...-
T Consensus 3 ~~~~~~~p~~~-~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-- 78 (215)
T 4dzr_A 3 VGPDCLIPRPD-TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG-- 78 (215)
T ss_dssp CSGGGGSCCHH-HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-----------------
T ss_pred CCCCccCCCcc-HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC--
Confidence 34566666665 344444443322 677899999999999999999997 46699999999999999999887611
Q ss_pred cccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 81 LLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 81 ~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
. +++++++|+.+.+.... ...++||+|++|+++++..
T Consensus 79 ---~-~~~~~~~d~~~~~~~~~--~~~~~fD~i~~npp~~~~~ 115 (215)
T 4dzr_A 79 ---A-VVDWAAADGIEWLIERA--ERGRPWHAIVSNPPYIPTG 115 (215)
T ss_dssp --------CCHHHHHHHHHHHH--HTTCCBSEEEECCCCCC--
T ss_pred ---C-ceEEEEcchHhhhhhhh--hccCcccEEEECCCCCCCc
Confidence 2 68888888766333211 1236799999999876543
No 42
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=7.1e-15 Score=98.74 Aligned_cols=115 Identities=13% Similarity=0.070 Sum_probs=80.8
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEc
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVAL 92 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~ 92 (139)
......+.+.+...++++.+|||+|||+|..+..+++... +++++|+++.+++.|++++.... . +++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~~ 95 (171)
T 1ws6_A 25 VRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTG-----L-GARVVAL 95 (171)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHT-----C-CCEEECS
T ss_pred HHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcC-----C-ceEEEec
Confidence 3345556666653344788999999999999999999864 69999999999999999987721 2 7899999
Q ss_pred cchhhhHHHhhhccCCceeEEecCcccc-ccccceeeee--eeccCCCC
Q psy5757 93 GMIKRIETVELMMKFDRYDFLPHAPAES-WMNIPVCINY--TATMPEGS 138 (139)
Q Consensus 93 d~~~~~~~~~~~~~~~~~D~vi~~~~~~-~~~~p~~~~~--~~~~p~g~ 138 (139)
|+.+...... ...++||+|++++++| ...+...... +.++|+|.
T Consensus 96 d~~~~~~~~~--~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~ 142 (171)
T 1ws6_A 96 PVEVFLPEAK--AQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGL 142 (171)
T ss_dssp CHHHHHHHHH--HTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHhhh--ccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcE
Confidence 9766333221 1234799999999886 1112222222 55666663
No 43
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.57 E-value=6e-15 Score=107.17 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=79.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++... +++++|+++.+++.|++++.. +. .++++++++|+.+. . ...
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~----~~~ 133 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGV-----SDNMQFIHCAAQDV-A----SHL 133 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CC-----GGGEEEEESCGGGT-G----GGC
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCC-----CcceEEEEcCHHHh-h----hhc
Confidence 4567999999999999999999843 999999999999999999887 44 36899999996552 1 123
Q ss_pred CCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
.++||+|+++.++||+.++... .++.++|+|.
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 168 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGV 168 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEE
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHHcCCCeE
Confidence 5789999999999999887433 3677777774
No 44
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.57 E-value=1.1e-14 Score=102.76 Aligned_cols=101 Identities=23% Similarity=0.293 Sum_probs=82.2
Q ss_pred hcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCC
Q psy5757 6 IGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG 85 (139)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~ 85 (139)
.++.+..+.....+++.+. ..++.+|||+|||+|..+..+++... +++++|+++.+++.+++++.. ..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~-------~~ 116 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELD--LHKGQKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSY-------YN 116 (231)
T ss_dssp TTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTT-------CS
T ss_pred CCCccCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhh-------cC
Confidence 3556677777888888774 57888999999999999999999873 999999999999999998765 13
Q ss_pred cEEEEEccchhhhHHHhhhccCCceeEEecCcccccccc
Q psy5757 86 HIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 86 ~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~ 124 (139)
+++++.+|+.+.+. ..++||+|+++.++|++.+
T Consensus 117 ~v~~~~~d~~~~~~------~~~~fD~v~~~~~~~~~~~ 149 (231)
T 1vbf_A 117 NIKLILGDGTLGYE------EEKPYDRVVVWATAPTLLC 149 (231)
T ss_dssp SEEEEESCGGGCCG------GGCCEEEEEESSBBSSCCH
T ss_pred CeEEEECCcccccc------cCCCccEEEECCcHHHHHH
Confidence 78999999655221 2357999999999998764
No 45
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=4.7e-15 Score=104.67 Aligned_cols=97 Identities=15% Similarity=0.267 Sum_probs=79.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
..++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++.. ..+++++++|+.+ + ..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~-~-----~~- 106 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRG-------NLKVKYIEADYSK-Y-----DF- 106 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCS-------CTTEEEEESCTTT-C-----CC-
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhcc-------CCCEEEEeCchhc-c-----CC-
Confidence 4677899999999999999999997 466999999999999999998755 2489999999654 1 11
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
.++||+|+++.++|++.++. ...++.++|+|.
T Consensus 107 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 143 (234)
T 3dtn_A 107 EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGI 143 (234)
T ss_dssp CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcE
Confidence 26899999999999998764 334677788774
No 46
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=6.5e-15 Score=105.54 Aligned_cols=114 Identities=15% Similarity=0.215 Sum_probs=85.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+.. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. .++++++++|+
T Consensus 51 ~~~~l~~l~~-~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~ 124 (248)
T 3tfw_A 51 QGQFLALLVR-LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----DQRVTLREGPA 124 (248)
T ss_dssp HHHHHHHHHH-HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCH
T ss_pred HHHHHHHHHh-hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCH
Confidence 3444444432 45678999999999999999999985577999999999999999999987 55 35899999997
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
.+.++.+ ...++||+|++..............++.++|+|.
T Consensus 125 ~~~l~~~---~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 165 (248)
T 3tfw_A 125 LQSLESL---GECPAFDLIFIDADKPNNPHYLRWALRYSRPGTL 165 (248)
T ss_dssp HHHHHTC---CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCE
T ss_pred HHHHHhc---CCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeE
Confidence 6533321 1234799999887655544445555778888874
No 47
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=2e-14 Score=100.31 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=83.2
Q ss_pred ccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEE
Q psy5757 10 IGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIK 88 (139)
Q Consensus 10 ~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~ 88 (139)
++.......++..+. +.++.+|||+|||+|.++..+++.. ++|+++|+++.+++.|+++++. +. ..+++
T Consensus 38 ~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~ 107 (204)
T 3njr_A 38 ITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDTYGL-----SPRMR 107 (204)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEE
T ss_pred CCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCC-----CCCEE
Confidence 344455556666664 5788999999999999999999983 3999999999999999999887 54 23899
Q ss_pred EEEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 89 FVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 89 ~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
++.+|+.+.+. ...+||+|+++..+.. . .....++.++|+|.
T Consensus 108 ~~~~d~~~~~~------~~~~~D~v~~~~~~~~-~-~l~~~~~~LkpgG~ 149 (204)
T 3njr_A 108 AVQGTAPAALA------DLPLPEAVFIGGGGSQ-A-LYDRLWEWLAPGTR 149 (204)
T ss_dssp EEESCTTGGGT------TSCCCSEEEECSCCCH-H-HHHHHHHHSCTTCE
T ss_pred EEeCchhhhcc------cCCCCCEEEECCcccH-H-HHHHHHHhcCCCcE
Confidence 99999765322 1246999999875521 1 33444677788874
No 48
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.56 E-value=9.6e-15 Score=105.18 Aligned_cols=103 Identities=12% Similarity=0.049 Sum_probs=75.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh----------h-cccc-ccCCcEEEEEccch
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH----------S-NARL-LTDGHIKFVALGMI 95 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~----------~-~~~~-~~~~~i~~~~~d~~ 95 (139)
.++.+|||+|||+|..+..|++... +|+|+|+|+.+++.|+++... + .... -...+++++++|+.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 5778999999999999999999864 999999999999999876531 0 0000 00257999999976
Q ss_pred hhhHHHhhhccCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
+ +. .. ..++||+|+++.++++++.+. ...++.++|+|.
T Consensus 144 ~-l~---~~-~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~ 186 (252)
T 2gb4_A 144 D-LP---RA-NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQ 186 (252)
T ss_dssp T-GG---GG-CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEE
T ss_pred c-CC---cc-cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeE
Confidence 5 22 11 126899999999999987543 234677777774
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.56 E-value=5.8e-15 Score=101.76 Aligned_cols=84 Identities=12% Similarity=0.203 Sum_probs=69.8
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.++++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++++++|+.+ +. .
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~---~- 88 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----IDRVTLIKDGHQN-MD---K- 88 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----GGGEEEECSCGGG-GG---G-
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHH-Hh---h-
Confidence 367889999999999999999999976567999999999999999999887 43 3689999999655 22 1
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
...++||+|++++++
T Consensus 89 ~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 89 YIDCPVKAVMFNLGY 103 (197)
T ss_dssp TCCSCEEEEEEEESB
T ss_pred hccCCceEEEEcCCc
Confidence 123679999999865
No 50
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.56 E-value=3.8e-15 Score=106.15 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=78.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+++|++|||+|||+|.++..+++..++.++|+++|+++++++.+++++.. ..|+..+.+|..+ ...+ ...
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-------~~ni~~V~~d~~~-p~~~--~~~ 144 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-------RRNIFPILGDARF-PEKY--RHL 144 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-------CTTEEEEESCTTC-GGGG--TTT
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-------hcCeeEEEEeccC-cccc--ccc
Confidence 68999999999999999999999998899999999999999999888766 3688889888665 3322 223
Q ss_pred CCceeEEecCccccccccc-eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIP-VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p-~~~~~~~~~p~g~ 138 (139)
.+.+|+|++....++.... .....+.++|+|.
T Consensus 145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~ 177 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDGGY 177 (233)
T ss_dssp CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEE
T ss_pred cceEEEEEEeccCChhHHHHHHHHHHhccCCCE
Confidence 4679999988776653221 2222456666664
No 51
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=1.2e-15 Score=109.16 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=83.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+.. ..++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++.. +. .++++++++|+
T Consensus 48 ~~~~l~~l~~-~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda 121 (242)
T 3r3h_A 48 QAQFMQMLIR-LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----EHKIKLRLGPA 121 (242)
T ss_dssp HHHHHHHHHH-HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----TTTEEEEESCH
T ss_pred HHHHHHHHHh-hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCH
Confidence 3444444432 45668999999999999999999886578999999999999999999988 55 36899999998
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
.+.+..+......++||+|+++.............++.++|+|
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG 164 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKG 164 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCe
Confidence 7644433211124679999998764333332333355555555
No 52
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=7.9e-15 Score=106.79 Aligned_cols=113 Identities=17% Similarity=0.227 Sum_probs=88.8
Q ss_pred ChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEE
Q psy5757 12 GISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVA 91 (139)
Q Consensus 12 ~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~ 91 (139)
.+.....+.+.+. .+.++.+|||+|||+|..+..+++..+..++++++|+++.+++.|++++... ..++++++
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~~v~~~~ 78 (284)
T 3gu3_A 6 NDDYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL------PYDSEFLE 78 (284)
T ss_dssp CHHHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS------SSEEEEEE
T ss_pred chHHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEE
Confidence 4555667777765 3577899999999999999999998754469999999999999999998761 13899999
Q ss_pred ccchhhhHHHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 92 LGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 92 ~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+|+.+ +. . .++||+|+++.++|++.++... .++.++|+|.
T Consensus 79 ~d~~~-~~---~---~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 121 (284)
T 3gu3_A 79 GDATE-IE---L---NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGK 121 (284)
T ss_dssp SCTTT-CC---C---SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEE
T ss_pred cchhh-cC---c---CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCE
Confidence 99665 22 1 3589999999999999877433 3667777764
No 53
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.56 E-value=1.4e-14 Score=103.64 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=66.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh-hHHHhhhcc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR-IETVELMMK 106 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~-~~~~~~~~~ 106 (139)
++.+|||+|||+|..+..++... +.++++++|+++.+++.|++++.. ++ ..+++++++|+.+. ...+ ...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~--~~~ 136 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNL-----SDLIKVVKVPQKTLLMDAL--KEE 136 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTCSSTTTS--TTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCC-----CccEEEEEcchhhhhhhhh--hcc
Confidence 56799999999999999999876 245999999999999999999987 54 24599999996541 1111 101
Q ss_pred -CCceeEEecCccccccc
Q psy5757 107 -FDRYDFLPHAPAESWMN 123 (139)
Q Consensus 107 -~~~~D~vi~~~~~~~~~ 123 (139)
.++||+|++|+++++..
T Consensus 137 ~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 137 SEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp CSCCBSEEEECCCCC---
T ss_pred cCCcccEEEECCCCccCc
Confidence 25799999999988654
No 54
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.56 E-value=2.8e-15 Score=110.22 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=82.5
Q ss_pred HhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHH
Q psy5757 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIET 100 (139)
Q Consensus 22 ~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~ 100 (139)
.+...+.++.+|||+|||+|..+..++....+.++++++|+++.+++.+++++.. +. ..+++++++|+.+ +
T Consensus 111 ~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~-- 182 (305)
T 3ocj_A 111 ALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----AGQITLHRQDAWK-L-- 182 (305)
T ss_dssp HHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEECCGGG-C--
T ss_pred HHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECchhc-C--
Confidence 3333467889999999999999999974444567999999999999999999887 54 3569999999655 1
Q ss_pred HhhhccCCceeEEecCcccccccccee------eeeeeccCCCC
Q psy5757 101 VELMMKFDRYDFLPHAPAESWMNIPVC------INYTATMPEGS 138 (139)
Q Consensus 101 ~~~~~~~~~~D~vi~~~~~~~~~~p~~------~~~~~~~p~g~ 138 (139)
..+ ++||+|+++.++|+++++.. ..++.++|+|.
T Consensus 183 ---~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 222 (305)
T 3ocj_A 183 ---DTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGA 222 (305)
T ss_dssp ---CCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEE
T ss_pred ---Ccc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeE
Confidence 122 78999999999999987753 33667777774
No 55
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.55 E-value=4.3e-14 Score=103.95 Aligned_cols=100 Identities=19% Similarity=0.154 Sum_probs=80.4
Q ss_pred hhcc-cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT 83 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~ 83 (139)
.+|+ ++..+.++.++++.+. +.++.+|||+|||+|.++..+++... +|+++|+|+.+++.+++++..
T Consensus 27 ~~GQnfL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~~---~V~aVEid~~li~~a~~~~~~------- 94 (295)
T 3gru_A 27 KLGQCFLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNAK---KVYVIEIDKSLEPYANKLKEL------- 94 (295)
T ss_dssp ---CCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCGGGHHHHHHHHHH-------
T ss_pred ccCccccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHhcc-------
Confidence 4577 6667788888888886 57888999999999999999999864 999999999999999998864
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCcccccc
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
.++++++++|+.+ +. . +...||+|++|.++++.
T Consensus 95 ~~~v~vi~gD~l~-~~---~--~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 95 YNNIEIIWGDALK-VD---L--NKLDFNKVVANLPYQIS 127 (295)
T ss_dssp CSSEEEEESCTTT-SC---G--GGSCCSEEEEECCGGGH
T ss_pred CCCeEEEECchhh-CC---c--ccCCccEEEEeCccccc
Confidence 3789999999765 11 1 22469999999987654
No 56
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.55 E-value=3.5e-15 Score=105.57 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=81.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+.+.+.+ ..++.+|||+|||+|.++..+++... +++++|+++.+++.|+++.. .+++++++|+.
T Consensus 30 ~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~---------~~v~~~~~d~~ 96 (250)
T 2p7i_A 30 HPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLK---------DGITYIHSRFE 96 (250)
T ss_dssp HHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSC---------SCEEEEESCGG
T ss_pred HHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhh---------CCeEEEEccHH
Confidence 4556666653 35678999999999999999998764 89999999999999988742 27899999965
Q ss_pred hhhHHHhhhccCCceeEEecCccccccccceee---ee-eeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAESWMNIPVCI---NY-TATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~-~~~~p~g~ 138 (139)
+. .+.++||+|+++.++||+.+|... .+ +.++|+|.
T Consensus 97 ~~-------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~ 136 (250)
T 2p7i_A 97 DA-------QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGR 136 (250)
T ss_dssp GC-------CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEE
T ss_pred Hc-------CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCE
Confidence 41 235689999999999999887433 36 77788774
No 57
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.55 E-value=1.5e-14 Score=105.77 Aligned_cols=100 Identities=12% Similarity=0.172 Sum_probs=74.3
Q ss_pred hcccccChHHHHHHHHHhcccC--CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccc
Q psy5757 6 IGAAIGGISAILTYLSIIQPHL--NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLL 82 (139)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~ 82 (139)
.+..++.+. ...+.+.+...+ .++.+|||+|||+|..+..++.. +.++++++|+|+.+++.|++++.. +.
T Consensus 99 ~~~lipr~~-te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l---- 171 (284)
T 1nv8_A 99 EGVFVPRPE-TEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGV---- 171 (284)
T ss_dssp TTSCCCCTT-HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTC----
T ss_pred CCceecChh-HHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC----
Confidence 345555554 333333333222 36679999999999999999998 466999999999999999999988 54
Q ss_pred cCCcEEEEEccchhhhHHHhhhccCCce---eEEecCccccc
Q psy5757 83 TDGHIKFVALGMIKRIETVELMMKFDRY---DFLPHAPAESW 121 (139)
Q Consensus 83 ~~~~i~~~~~d~~~~~~~~~~~~~~~~~---D~vi~~~~~~~ 121 (139)
..+++++++|+.+.+. ++| |+|++||++..
T Consensus 172 -~~~v~~~~~D~~~~~~--------~~f~~~D~IvsnPPyi~ 204 (284)
T 1nv8_A 172 -SDRFFVRKGEFLEPFK--------EKFASIEMILSNPPYVK 204 (284)
T ss_dssp -TTSEEEEESSTTGGGG--------GGTTTCCEEEECCCCBC
T ss_pred -CCceEEEECcchhhcc--------cccCCCCEEEEcCCCCC
Confidence 2359999999765221 356 99999988654
No 58
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.55 E-value=9e-15 Score=103.16 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=77.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +...++|+|+++.+++.|++++.. ++ .|+.++++|+.+.++. ..+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~---~~~ 102 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHK---MIP 102 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHH---HSC
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHH---HcC
Confidence 367899999999999999999987 467899999999999999999887 54 7899999997663332 234
Q ss_pred CCceeEEecCcccccccc-----------ceeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNI-----------PVCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~-----------p~~~~~~~~~p~g~ 138 (139)
.+++|.|+++.+..|... .....++.++|+|.
T Consensus 103 ~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~ 145 (218)
T 3dxy_A 103 DNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGV 145 (218)
T ss_dssp TTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEE
T ss_pred CCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcE
Confidence 678999999855444332 12333566777764
No 59
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=8.8e-15 Score=102.52 Aligned_cols=108 Identities=13% Similarity=0.202 Sum_probs=80.2
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+.+.+...+.++.+|||+|||+|..+..+++... +++++|+++.+++.++++..... .+++++++|+.
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 95 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDAR 95 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC------CCceEEECchh
Confidence 3445555555566788999999999999999999874 99999999999999999887621 57899999965
Q ss_pred hhhHHHhhhccCCceeEEecCcc--ccccccce---eeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPA--ESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~--~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+ + ..+.++||+|+++.+ +++..++. ...++.++|+|.
T Consensus 96 ~-~-----~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 137 (227)
T 1ve3_A 96 K-L-----SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGK 137 (227)
T ss_dssp S-C-----CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEE
T ss_pred c-C-----CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcE
Confidence 4 1 123468999999999 55554432 223556666663
No 60
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.55 E-value=4.8e-15 Score=112.35 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=82.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcc--ccccCCcEEEEEccchhhhHHH-h
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNA--RLLTDGHIKFVALGMIKRIETV-E 102 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~--~~~~~~~i~~~~~d~~~~~~~~-~ 102 (139)
..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. ... -++..++++++++|+.+ +... .
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~-l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN-LATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC-GGGCBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH-hhhccc
Confidence 35778999999999999999999986677999999999999999998764 110 00112689999999665 2110 0
Q ss_pred hhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 103 LMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
...+.++||+|+++.++||+.++... .++.++|+|.
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~ 198 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGE 198 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCE
Confidence 02345689999999999999886433 3677777774
No 61
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.54 E-value=4.7e-15 Score=106.13 Aligned_cols=97 Identities=28% Similarity=0.323 Sum_probs=77.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|..+..+++..+ ++++++|+++.+++.++++... ..+++++++|+.+ + +.+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~-~-----~~~ 117 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSG-------NNKIIFEANDILT-K-----EFP 117 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCS-------CTTEEEEECCTTT-C-----CCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhc-------CCCeEEEECcccc-C-----CCC
Confidence 46788999999999999999999863 3999999999999999988655 2689999999654 1 223
Q ss_pred CCceeEEecCcccccc--ccce---eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWM--NIPV---CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~--~~p~---~~~~~~~~p~g~ 138 (139)
.++||+|+++.++|++ .++. ...++.++|+|.
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~ 154 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGT 154 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999 5543 333666677664
No 62
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.54 E-value=1.1e-14 Score=107.32 Aligned_cols=98 Identities=10% Similarity=0.086 Sum_probs=78.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|.++..+++..+ ++++++|+++.+++.|++++.. ++ ..+++++++|+.+ + +.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~-----~~ 181 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRI-----DDHVRSRVCNMLD-T-----PF 181 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-C-----CC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhc-C-----CC
Confidence 46788999999999999999999853 3999999999999999999987 54 3589999999654 1 22
Q ss_pred cCCceeEEecCccccccccce---eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+.++||+|+++.++|++. +. ...++.++|+|.
T Consensus 182 ~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~LkpgG~ 216 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYVD-LHDLFSEHSRFLKVGGR 216 (312)
T ss_dssp CTTCEEEEEEESCGGGSC-HHHHHHHHHHHEEEEEE
T ss_pred CCCCEeEEEECCchhhCC-HHHHHHHHHHHcCCCcE
Confidence 356899999999999984 32 223666777764
No 63
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=8.3e-15 Score=105.45 Aligned_cols=85 Identities=16% Similarity=0.324 Sum_probs=68.4
Q ss_pred CC-CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 27 LN-ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 27 ~~-~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.. ++.+|||+|||+|..+..++++... +++++|+++.+++.|++++.. ++ ..+++++++|+.+.. ..
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~-----~~~v~~~~~D~~~~~----~~ 114 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQL-----EDQIEIIEYDLKKIT----DL 114 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGGG----GT
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCC-----cccEEEEECcHHHhh----hh
Confidence 56 7899999999999999999998642 999999999999999999987 54 357999999976522 12
Q ss_pred ccCCceeEEecCcccccc
Q psy5757 105 MKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~ 122 (139)
.+.++||+|++|++++..
T Consensus 115 ~~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 115 IPKERADIVTCNPPYFAT 132 (259)
T ss_dssp SCTTCEEEEEECCCC---
T ss_pred hccCCccEEEECCCCCCC
Confidence 235689999999997554
No 64
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.54 E-value=2.2e-14 Score=101.00 Aligned_cols=88 Identities=14% Similarity=0.157 Sum_probs=70.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++++++|+.+.+..+....
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----EHKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTT
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CCeEEEEEcCHHHHHHHHHhcC
Confidence 46678999999999999999999875467999999999999999999887 54 3689999999876444432211
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
..++||+|++++..
T Consensus 142 ~~~~~D~v~~d~~~ 155 (229)
T 2avd_A 142 EAGTFDVAVVDADK 155 (229)
T ss_dssp CTTCEEEEEECSCS
T ss_pred CCCCccEEEECCCH
Confidence 11579999998763
No 65
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.54 E-value=1.3e-14 Score=101.52 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++|+|+++.+++.|++++.. +. .+++++++|+.+ +.. ..+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~-~~~---~~~ 108 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSD-LTD---YFE 108 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSC-GGG---TSC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHH-HHh---hcC
Confidence 457899999999999999999987 466999999999999999999887 44 789999999765 321 123
Q ss_pred CCceeEEecCcccccccc-----------ceeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNI-----------PVCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~-----------p~~~~~~~~~p~g~ 138 (139)
.++||+|+++++.+|... ......+.++|+|.
T Consensus 109 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 151 (214)
T 1yzh_A 109 DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGE 151 (214)
T ss_dssp TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCE
T ss_pred CCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcE
Confidence 467999999988766442 22333667788874
No 66
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.54 E-value=3.1e-15 Score=109.60 Aligned_cols=109 Identities=20% Similarity=0.285 Sum_probs=77.7
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccc--------------------------
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNAR-------------------------- 80 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~-------------------------- 80 (139)
.++++|||+|||+|..+..+++..+ ..+++|+|+++.+++.|++++.. +...
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 4678999999999999999999974 45999999999999999998765 2100
Q ss_pred -------------------------cc-cCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc------cc---
Q psy5757 81 -------------------------LL-TDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN------IP--- 125 (139)
Q Consensus 81 -------------------------~~-~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~------~p--- 125 (139)
.. -..+++++++|+.+....+ .....++||+|++..+++|+. ++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~-~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDL-VEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHH-HTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCcccc-ccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 00 0048999999976532211 122356899999999998874 22
Q ss_pred eeeeeeeccCCCC
Q psy5757 126 VCINYTATMPEGS 138 (139)
Q Consensus 126 ~~~~~~~~~p~g~ 138 (139)
....++.++|+|.
T Consensus 203 l~~~~~~LkpGG~ 215 (292)
T 3g07_A 203 FRRIYRHLRPGGI 215 (292)
T ss_dssp HHHHHHHEEEEEE
T ss_pred HHHHHHHhCCCcE
Confidence 3444777777774
No 67
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.54 E-value=1.7e-14 Score=102.91 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=76.7
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|..+..+++.... +++++|+++.+++.++++... .+++++.+|+.+ + +.+.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~-~-----~~~~ 106 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTS--------PVVCYEQKAIED-I-----AIEP 106 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCC--------TTEEEEECCGGG-C-----CCCT
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhcc--------CCeEEEEcchhh-C-----CCCC
Confidence 37789999999999999999998642 899999999999999988653 689999999654 1 2235
Q ss_pred CceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
++||+|+++.++|++.++... .++.++|+|.
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 140 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGS 140 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcE
Confidence 789999999999999876433 3666777764
No 68
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=1e-14 Score=104.18 Aligned_cols=94 Identities=13% Similarity=0.248 Sum_probs=76.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
..++.+|||+|||+|..+..+++.. +.++++++|+++.+++.++++. ++++++++|+.+ + . +
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~----~--~-~ 92 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLAT----W--K-P 92 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTT----C--C-C
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhh----c--C-c
Confidence 3577899999999999999999987 3569999999999999998872 578899999654 1 1 3
Q ss_pred CCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
.++||+|+++.++||+.++... .++.++|+|.
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 127 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGV 127 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEE
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeE
Confidence 5679999999999999876433 3677777764
No 69
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.53 E-value=2e-14 Score=102.18 Aligned_cols=121 Identities=9% Similarity=0.059 Sum_probs=83.9
Q ss_pred ccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEE
Q psy5757 10 IGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIK 88 (139)
Q Consensus 10 ~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~ 88 (139)
...+.....+...+. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++
T Consensus 43 ~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~v~ 115 (239)
T 2hnk_A 43 QISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----ENKIF 115 (239)
T ss_dssp SCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEE
T ss_pred ccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCEE
Confidence 445554444444443 45678999999999999999999975466999999999999999999887 54 24599
Q ss_pred EEEccchhhhHHHhhh---------cc-C-CceeEEecCccccccccceeeeeeeccCCC
Q psy5757 89 FVALGMIKRIETVELM---------MK-F-DRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 89 ~~~~d~~~~~~~~~~~---------~~-~-~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
++.+|+.+.+..+... .+ . ++||+|+++...+..........+.++|+|
T Consensus 116 ~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG 175 (239)
T 2hnk_A 116 LKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGG 175 (239)
T ss_dssp EEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE
T ss_pred EEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCe
Confidence 9999977644432110 11 1 679999998765443333333344445544
No 70
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.53 E-value=1.8e-14 Score=103.86 Aligned_cols=102 Identities=16% Similarity=0.264 Sum_probs=78.3
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHH------HHHHHHHHHHh-hccccccCCcEEEEEcc-chhhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQ------LVNSSIQNILH-SNARLLTDGHIKFVALG-MIKRI 98 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~------~~~~a~~~~~~-~~~~~~~~~~i~~~~~d-~~~~~ 98 (139)
+.++.+|||+|||+|..+..+++..++.++++++|+++. +++.|++++.. +. .++++++++| +..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-- 113 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----GDRLTVHFNTNLSD-- 113 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----GGGEEEECSCCTTT--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----CCceEEEECChhhh--
Confidence 578899999999999999999999755569999999987 89999999877 43 3589999987 322
Q ss_pred HHHhhhccCCceeEEecCccccccccceeee--eeeccC-CC
Q psy5757 99 ETVELMMKFDRYDFLPHAPAESWMNIPVCIN--YTATMP-EG 137 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~--~~~~~p-~g 137 (139)
.. .+.+.++||+|+++.++|++.++.... ++.++| +|
T Consensus 114 ~~--~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG 153 (275)
T 3bkx_A 114 DL--GPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCD 153 (275)
T ss_dssp CC--GGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCS
T ss_pred cc--CCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCC
Confidence 11 122356899999999999998875422 334444 55
No 71
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=1.7e-14 Score=102.51 Aligned_cols=107 Identities=12% Similarity=0.091 Sum_probs=81.2
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
.+..+...+.++.+|||+|||+|..+..+++... +++++|+|+.+++.++++... .+++++++|+.+ +
T Consensus 46 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~-~ 113 (245)
T 3ggd_A 46 DLPRFELLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLV-P 113 (245)
T ss_dssp HHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTC-H
T ss_pred HHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcc--------cCceEEECcccc-c
Confidence 3444444567888999999999999999999885 899999999999999988633 589999999776 2
Q ss_pred HHHhhhcc-CCceeEEecCccccccc--cc---eeeeeeeccCCCC
Q psy5757 99 ETVELMMK-FDRYDFLPHAPAESWMN--IP---VCINYTATMPEGS 138 (139)
Q Consensus 99 ~~~~~~~~-~~~~D~vi~~~~~~~~~--~p---~~~~~~~~~p~g~ 138 (139)
... .... ...||+|+++.++|++. ++ ....++.++|+|.
T Consensus 114 ~~~-~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 158 (245)
T 3ggd_A 114 EQA-AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGA 158 (245)
T ss_dssp HHH-HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCE
T ss_pred ccc-cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCE
Confidence 211 1111 12489999999999998 33 2344778888885
No 72
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.53 E-value=2.7e-14 Score=100.14 Aligned_cols=100 Identities=15% Similarity=0.230 Sum_probs=77.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++|+|+++.+++.|++++.. ++ .|++++++|+.+ +.. ..+
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~-l~~---~~~ 105 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADT-LTD---VFE 105 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGG-HHH---HCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHH-HHh---hcC
Confidence 467899999999999999999987 467999999999999999999887 44 789999999765 321 133
Q ss_pred CCceeEEecCcccccccc-----------ceeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNI-----------PVCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~-----------p~~~~~~~~~p~g~ 138 (139)
.++||.|+++.+..|... ......+.++|+|.
T Consensus 106 ~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~ 148 (213)
T 2fca_A 106 PGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGS 148 (213)
T ss_dssp TTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCE
T ss_pred cCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCE
Confidence 567999988766555432 13334677888885
No 73
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.53 E-value=4.1e-14 Score=100.76 Aligned_cols=116 Identities=14% Similarity=0.114 Sum_probs=81.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+.. ..++++|||+|||+|+.+..+++..++.++++++|+++.+++.|++++.. +. ..+++++++|+
T Consensus 58 ~~~~l~~l~~-~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda 131 (237)
T 3c3y_A 58 AGQLMSFVLK-LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----EHKINFIESDA 131 (237)
T ss_dssp HHHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCH
T ss_pred HHHHHHHHHH-hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCH
Confidence 3444444432 35668999999999999999999986578999999999999999999987 54 35799999998
Q ss_pred hhhhHHHhhhc-cCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 95 IKRIETVELMM-KFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 95 ~~~~~~~~~~~-~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
.+.++.+.... +.++||+|++...............+.++|+|
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG 175 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGG 175 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCe
Confidence 77444332111 14679999988653322222222334444544
No 74
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.53 E-value=2.7e-14 Score=103.71 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=78.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++..+. +++++|+|+.+++.+++++.. +. ..+++++.+|+.+ +
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~----~---- 126 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGWEQ----F---- 126 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCGGG----C----
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECChhh----C----
Confidence 467889999999999999999977643 999999999999999999877 44 3689999999533 1
Q ss_pred cCCceeEEecCccccccc--cce---eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMN--IPV---CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~--~p~---~~~~~~~~p~g~ 138 (139)
+ ++||+|++..++|++. ++. ....+.++|+|.
T Consensus 127 ~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 163 (287)
T 1kpg_A 127 D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGV 163 (287)
T ss_dssp C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCE
T ss_pred C-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCE
Confidence 2 6799999999999994 332 334778889885
No 75
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.53 E-value=3.5e-14 Score=96.68 Aligned_cols=113 Identities=12% Similarity=0.175 Sum_probs=85.7
Q ss_pred ccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEE
Q psy5757 10 IGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIK 88 (139)
Q Consensus 10 ~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~ 88 (139)
.+.......++..+. ..++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++.. +. ..+++
T Consensus 16 ~~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~ 85 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGL-----GDNVT 85 (192)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTC-----CTTEE
T ss_pred CChHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCC-----CcceE
Confidence 344555566666664 5788899999999999999999987 3999999999999999999877 33 26899
Q ss_pred EEEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 89 FVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 89 ~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
++.+|+.+.++ ..++||+|+++.++++.........+.++|+|.
T Consensus 86 ~~~~d~~~~~~------~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~ 129 (192)
T 1l3i_A 86 LMEGDAPEALC------KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGR 129 (192)
T ss_dssp EEESCHHHHHT------TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEE
T ss_pred EEecCHHHhcc------cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcE
Confidence 99999654221 124799999999877766555555666666653
No 76
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=1.5e-14 Score=98.05 Aligned_cols=93 Identities=16% Similarity=0.196 Sum_probs=72.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+.+.+.+ ..++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. ++ ..+++++.+|+
T Consensus 19 ~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~ 90 (177)
T 2esr_A 19 RGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKA-----ENRFTLLKMEA 90 (177)
T ss_dssp HHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTC-----GGGEEEECSCH
T ss_pred HHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcH
Confidence 4455555542 4577899999999999999999873 34999999999999999999987 44 25799999996
Q ss_pred hhhhHHHhhhccCCceeEEecCccccc
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
.+.+. ...++||+|++++++++
T Consensus 91 ~~~~~-----~~~~~fD~i~~~~~~~~ 112 (177)
T 2esr_A 91 ERAID-----CLTGRFDLVFLDPPYAK 112 (177)
T ss_dssp HHHHH-----HBCSCEEEEEECCSSHH
T ss_pred HHhHH-----hhcCCCCEEEECCCCCc
Confidence 65322 12356999999998753
No 77
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.53 E-value=2.4e-14 Score=101.26 Aligned_cols=120 Identities=14% Similarity=0.229 Sum_probs=84.9
Q ss_pred cccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCC
Q psy5757 7 GAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDG 85 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~ 85 (139)
+..+..+.....+...+. ..++.+|||+|||+|..+..+++..+ .++++++|+++.+++.|++++.. +. ..
T Consensus 34 ~~~~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~ 105 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGL-----ES 105 (233)
T ss_dssp TCCCCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTC-----TT
T ss_pred CCCCcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC-----CC
Confidence 344556655555555553 45778999999999999999999973 56999999999999999999887 54 35
Q ss_pred cEEEEEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 86 HIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 86 ~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
+++++.+|+.+.++.. ...++||+|+++.+.+..........+.++|+|
T Consensus 106 ~v~~~~~d~~~~~~~~---~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG 154 (233)
T 2gpy_A 106 RIELLFGDALQLGEKL---ELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGG 154 (233)
T ss_dssp TEEEECSCGGGSHHHH---TTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEE
T ss_pred cEEEEECCHHHHHHhc---ccCCCccEEEECCCHHHHHHHHHHHHHHcCCCe
Confidence 7999999976643321 113579999998876533332233344444444
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=2.4e-14 Score=97.67 Aligned_cols=106 Identities=11% Similarity=0.179 Sum_probs=80.0
Q ss_pred HHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCc--EEEE
Q psy5757 14 SAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGH--IKFV 90 (139)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~--i~~~ 90 (139)
.....+++.+. ..++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++.. +. .+ ++++
T Consensus 39 ~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~~ 107 (194)
T 1dus_A 39 KGTKILVENVV--VDKDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNL------DNYDIRVV 107 (194)
T ss_dssp HHHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC------TTSCEEEE
T ss_pred hHHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCC------CccceEEE
Confidence 35566666664 4578899999999999999999883 3999999999999999999887 43 54 9999
Q ss_pred EccchhhhHHHhhhccCCceeEEecCcccccc-cc---ceeeeeeeccCCC
Q psy5757 91 ALGMIKRIETVELMMKFDRYDFLPHAPAESWM-NI---PVCINYTATMPEG 137 (139)
Q Consensus 91 ~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~-~~---p~~~~~~~~~p~g 137 (139)
.+|+.+.+ +.++||+|++++++|+. .+ .....++.++|+|
T Consensus 108 ~~d~~~~~-------~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG 151 (194)
T 1dus_A 108 HSDLYENV-------KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNG 151 (194)
T ss_dssp ECSTTTTC-------TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEE
T ss_pred ECchhccc-------ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCC
Confidence 99965521 24579999999998873 21 2233345555655
No 79
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=6.5e-14 Score=94.75 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=72.6
Q ss_pred ccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEE
Q psy5757 10 IGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIK 88 (139)
Q Consensus 10 ~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~ 88 (139)
.........+.+.+. ..++.+|||+|||+|..+..+++ +..+++++|+++.+++.+++++.. +. ++++
T Consensus 18 ~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~ 86 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI------KNCQ 86 (183)
T ss_dssp CCCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC------CSEE
T ss_pred cCHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC------CcEE
Confidence 344555566666664 56788999999999999999998 244999999999999999999887 43 6899
Q ss_pred EEEccchhhhHHHhhhccCCceeEEecCcc
Q psy5757 89 FVALGMIKRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 89 ~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
++++|+.+.+ +.++||+|+++.+
T Consensus 87 ~~~~d~~~~~-------~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 87 IIKGRAEDVL-------DKLEFNKAFIGGT 109 (183)
T ss_dssp EEESCHHHHG-------GGCCCSEEEECSC
T ss_pred EEECCccccc-------cCCCCcEEEECCc
Confidence 9999965421 2357999999988
No 80
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.52 E-value=3e-14 Score=106.04 Aligned_cols=124 Identities=23% Similarity=0.279 Sum_probs=85.0
Q ss_pred hcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-h----ccc
Q psy5757 6 IGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-S----NAR 80 (139)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~----~~~ 80 (139)
.++.+..+.....++..+. +.++.+|||+|||+|.++..+++..++.++++++|+++.+++.|++++.. + +.
T Consensus 84 ~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln- 160 (336)
T 2b25_A 84 RGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLS- 160 (336)
T ss_dssp CSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTT-
T ss_pred CCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccc-
Confidence 3445555655677777774 67889999999999999999999875567999999999999999999875 2 00
Q ss_pred cc--cCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 81 LL--TDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 81 ~~--~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
.+ ...+++++++|+.+.... .+.++||+|+++...+|. .....++.++|+|.
T Consensus 161 ~~~~~~~~v~~~~~d~~~~~~~----~~~~~fD~V~~~~~~~~~--~l~~~~~~LkpgG~ 214 (336)
T 2b25_A 161 HVEEWPDNVDFIHKDISGATED----IKSLTFDAVALDMLNPHV--TLPVFYPHLKHGGV 214 (336)
T ss_dssp CSSCCCCCEEEEESCTTCCC-----------EEEEEECSSSTTT--THHHHGGGEEEEEE
T ss_pred cccccCCceEEEECChHHcccc----cCCCCeeEEEECCCCHHH--HHHHHHHhcCCCcE
Confidence 00 025899999997653211 123569999998764443 22333455555553
No 81
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.52 E-value=3.5e-14 Score=97.52 Aligned_cols=103 Identities=13% Similarity=0.164 Sum_probs=77.7
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIK 96 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~ 96 (139)
.+.+.+. ..++.+|||+|||+|..+..+++... +++++|+++.+++.+++++.. +. ++++++.+|+.+
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~ 91 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLNN 91 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGGG
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchhh
Confidence 4445553 34667999999999999999999843 999999999999999999877 43 579999999654
Q ss_pred hhHHHhhhccCCceeEEecCccccccc--cc---eeeeeeeccCCCC
Q psy5757 97 RIETVELMMKFDRYDFLPHAPAESWMN--IP---VCINYTATMPEGS 138 (139)
Q Consensus 97 ~~~~~~~~~~~~~~D~vi~~~~~~~~~--~p---~~~~~~~~~p~g~ 138 (139)
+ .. .++||+|+++.++|++. ++ .....+.++|+|.
T Consensus 92 -~-----~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~ 131 (199)
T 2xvm_A 92 -L-----TF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGY 131 (199)
T ss_dssp -C-----CC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred -C-----CC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeE
Confidence 1 11 46799999999999986 22 2222455555553
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.52 E-value=1.5e-14 Score=102.97 Aligned_cols=100 Identities=12% Similarity=0.010 Sum_probs=75.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||||||+|..+..+++..+ .+++++|+++.+++.|+++..... .++.++.+|+.+ +....+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~------~~~~~~~~~a~~----~~~~~~~ 126 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWED----VAPTLPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHH----HGGGSCT
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC------CceEEEeehHHh----hcccccc
Confidence 6889999999999999999988753 389999999999999999887721 478888898544 2233456
Q ss_pred CceeEEecCc-----cccccccce---eeeeeeccCCCCC
Q psy5757 108 DRYDFLPHAP-----AESWMNIPV---CINYTATMPEGSY 139 (139)
Q Consensus 108 ~~~D~vi~~~-----~~~~~~~p~---~~~~~~~~p~g~~ 139 (139)
++||.|+... ..++..++. ...+++++|+|.|
T Consensus 127 ~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l 166 (236)
T 3orh_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred cCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEE
Confidence 6799987543 344444443 3458889999853
No 83
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.52 E-value=5.7e-14 Score=103.11 Aligned_cols=98 Identities=15% Similarity=0.032 Sum_probs=73.2
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.++++++|||+|||+|..+..++.+. +.++|+++|+++++++.|++++.. +. .+++++++|+.+ +
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v~gDa~~-l------ 184 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV------DGVNVITGDETV-I------ 184 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC------CSEEEEESCGGG-G------
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC------CCeEEEECchhh-C------
Confidence 37899999999999998775554443 356999999999999999999987 54 789999999755 2
Q ss_pred ccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 105 MKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
+.++||+|++.....-........++.++|+|.
T Consensus 185 -~d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~ 217 (298)
T 3fpf_A 185 -DGLEFDVLMVAALAEPKRRVFRNIHRYVDTETR 217 (298)
T ss_dssp -GGCCCSEEEECTTCSCHHHHHHHHHHHCCTTCE
T ss_pred -CCCCcCEEEECCCccCHHHHHHHHHHHcCCCcE
Confidence 246799999865421111223445777888885
No 84
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.52 E-value=4.1e-14 Score=99.67 Aligned_cols=86 Identities=20% Similarity=0.240 Sum_probs=67.0
Q ss_pred cCCCCCeEEEEccc-CChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSG-SGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G-~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.++++.+|||+||| +|.++..+++.. ..+++++|+++.+++.|++++.... . +++++++|+.. +. .
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~-~~----~ 118 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN-----S-NVRLVKSNGGI-IK----G 118 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT-----C-CCEEEECSSCS-ST----T
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC-----C-CcEEEeCCchh-hh----h
Confidence 35788999999999 999999999985 2399999999999999999988721 2 78999999532 11 1
Q ss_pred ccCCceeEEecCcccccccc
Q psy5757 105 MKFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~ 124 (139)
.+.++||+|++|+++++..+
T Consensus 119 ~~~~~fD~I~~npp~~~~~~ 138 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPL 138 (230)
T ss_dssp TCCSCEEEEEECCCCC----
T ss_pred cccCceeEEEECCCCcCCcc
Confidence 22468999999999887543
No 85
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.52 E-value=2.1e-14 Score=99.93 Aligned_cols=103 Identities=19% Similarity=0.233 Sum_probs=79.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+.+.+. .+.++.+|||+|||+|..+..+++... +++++|+++.+++.+++ .+ ..+++++++|+.
T Consensus 34 ~~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~---~~------~~~~~~~~~d~~ 100 (218)
T 3ou2_A 34 APAALERLR-AGNIRGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGR---HG------LDNVEFRQQDLF 100 (218)
T ss_dssp HHHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGG---GC------CTTEEEEECCTT
T ss_pred HHHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHh---cC------CCCeEEEecccc
Confidence 345555554 356778999999999999999999843 99999999999999987 21 268999999965
Q ss_pred hhhHHHhhhccCCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
+. .+.++||+|+++.++|++.++ ....++.++|+|.
T Consensus 101 ~~-------~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~ 141 (218)
T 3ou2_A 101 DW-------TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGV 141 (218)
T ss_dssp SC-------CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred cC-------CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeE
Confidence 42 245789999999999999886 2333566666663
No 86
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.51 E-value=2e-13 Score=99.05 Aligned_cols=101 Identities=13% Similarity=0.246 Sum_probs=77.3
Q ss_pred cccccChHHHHHHHHHhcccC-CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccC
Q psy5757 7 GAAIGGISAILTYLSIIQPHL-NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTD 84 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~l~~~~-~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~ 84 (139)
+..++.+. ...+.+.+...+ .++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.+++++.. +.
T Consensus 87 ~~~ipr~~-te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~------ 158 (276)
T 2b3t_A 87 ATLIPRPD-TECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAI------ 158 (276)
T ss_dssp TSCCCCTT-HHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTC------
T ss_pred CCcccCch-HHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC------
Confidence 44455554 344444443333 567799999999999999999887 466999999999999999999987 54
Q ss_pred CcEEEEEccchhhhHHHhhhccCCceeEEecCcccccc
Q psy5757 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 85 ~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
.+++++++|+.+.+ +.++||+|++|+++++.
T Consensus 159 ~~v~~~~~d~~~~~-------~~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 159 KNIHILQSDWFSAL-------AGQQFAMIVSNPPYIDE 189 (276)
T ss_dssp CSEEEECCSTTGGG-------TTCCEEEEEECCCCBCT
T ss_pred CceEEEEcchhhhc-------ccCCccEEEECCCCCCc
Confidence 68999999965521 24579999999987654
No 87
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.51 E-value=3.5e-14 Score=100.74 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=79.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccch
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~ 95 (139)
...+..+.. ..++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++++.+|+.
T Consensus 61 ~~~l~~l~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~ 134 (232)
T 3cbg_A 61 AQFLGLLIS-LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----AEKISLRLGPAL 134 (232)
T ss_dssp HHHHHHHHH-HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHH
T ss_pred HHHHHHHHH-hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHH
Confidence 334444332 34668999999999999999999885567999999999999999999887 54 357999999977
Q ss_pred hhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
+.+..+......++||+|+++..............+.++|+|
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG 176 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGG 176 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCe
Confidence 654443221111679999988763322222222334444444
No 88
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.51 E-value=1.9e-14 Score=103.37 Aligned_cols=103 Identities=12% Similarity=0.175 Sum_probs=79.7
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+.+.+....+++.+|||+|||+|.++..+++... +++++|+++.+++.|+++. .+++++++|+.
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~ 103 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRN----------PDAVLHHGDMR 103 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHC----------TTSEEEECCTT
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhC----------CCCEEEECChH
Confidence 4455566655567778999999999999999999864 8999999999999998874 46889999965
Q ss_pred hhhHHHhhhccCCceeEEecCc-cccccccc------eeeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAP-AESWMNIP------VCINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~-~~~~~~~p------~~~~~~~~~p~g~ 138 (139)
+ +. . .++||+|+++. ++||+.++ ....++.++|+|.
T Consensus 104 ~-~~---~---~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~ 146 (263)
T 3pfg_A 104 D-FS---L---GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGV 146 (263)
T ss_dssp T-CC---C---SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEE
T ss_pred H-CC---c---cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcE
Confidence 4 21 1 46799999998 99998643 2334666777764
No 89
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.51 E-value=3.1e-14 Score=107.86 Aligned_cols=108 Identities=13% Similarity=0.172 Sum_probs=77.1
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIK 96 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~ 96 (139)
.+++.+. ..++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.+++++.. +. -...+++++.+|+.+
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl---~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMP---EALDRCEFMINNALS 286 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCG---GGGGGEEEEECSTTT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCC---CcCceEEEEechhhc
Confidence 4455553 2455899999999999999999997 456999999999999999999987 43 011368889999765
Q ss_pred hhHHHhhhccCCceeEEecCcccccccc---c-----eeeeeeeccCCCC
Q psy5757 97 RIETVELMMKFDRYDFLPHAPAESWMNI---P-----VCINYTATMPEGS 138 (139)
Q Consensus 97 ~~~~~~~~~~~~~~D~vi~~~~~~~~~~---p-----~~~~~~~~~p~g~ 138 (139)
.+ +.++||+|++|+++|+... . ....++.++|+|.
T Consensus 287 ~~-------~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~ 329 (375)
T 4dcm_A 287 GV-------EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 329 (375)
T ss_dssp TC-------CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEE
T ss_pred cC-------CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcE
Confidence 22 3468999999999996322 1 2233556666664
No 90
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.50 E-value=2e-13 Score=99.85 Aligned_cols=100 Identities=20% Similarity=0.242 Sum_probs=79.5
Q ss_pred hhcccc-cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccc
Q psy5757 5 KIGAAI-GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLL 82 (139)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~ 82 (139)
.+|+.+ ..+.+...+++.+. ..++.+|||+|||+|.++..+++... +++++|+|+.+++.+++++.. +.
T Consensus 5 ~~gq~fl~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~---- 75 (285)
T 1zq9_A 5 GIGQHILKNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPV---- 75 (285)
T ss_dssp ---CCEECCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTT----
T ss_pred CCCcCccCCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCC----
Confidence 467755 47777888888875 57888999999999999999999864 999999999999999998865 32
Q ss_pred cCCcEEEEEccchhhhHHHhhhccCCceeEEecCcccccc
Q psy5757 83 TDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 83 ~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
.++++++++|+.+ + +..+||+|++|.+++|.
T Consensus 76 -~~~v~~~~~D~~~-~-------~~~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 76 -ASKLQVLVGDVLK-T-------DLPFFDTCVANLPYQIS 106 (285)
T ss_dssp -GGGEEEEESCTTT-S-------CCCCCSEEEEECCGGGH
T ss_pred -CCceEEEEcceec-c-------cchhhcEEEEecCcccc
Confidence 2589999999654 1 23369999999987764
No 91
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.50 E-value=1.7e-14 Score=103.74 Aligned_cols=106 Identities=21% Similarity=0.289 Sum_probs=81.5
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+++.+...+.++.+|||+|||+|.++..+++... +++++|+++.+++.+++++.. +. . +++..+|+
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~------~-v~~~~~d~ 176 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGV------R-PRFLEGSL 176 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTC------C-CEEEESCH
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECCh
Confidence 4455666655567889999999999999999988653 999999999999999999887 43 3 88999986
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
.+.+ +.++||+|++|...|++........+.++|+|.
T Consensus 177 ~~~~-------~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~ 213 (254)
T 2nxc_A 177 EAAL-------PFGPFDLLVANLYAELHAALAPRYREALVPGGR 213 (254)
T ss_dssp HHHG-------GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEE
T ss_pred hhcC-------cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCE
Confidence 5421 235799999998877765555555566666663
No 92
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=5.2e-14 Score=99.78 Aligned_cols=99 Identities=12% Similarity=-0.016 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
..++.+|||+|||+|..+..+++... .+++++|+|+.+++.|+++.... ..+++++++|+.+ +..+.+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~----~~~~~~ 125 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQ------THKVIPLKGLWED----VAPTLP 125 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGC------SSEEEEEESCHHH----HGGGSC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhc------CCCeEEEecCHHH----hhcccC
Confidence 36778999999999999999976542 28999999999999999987661 1579999999554 211334
Q ss_pred CCceeEEec-Cccccccccc--------eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPH-APAESWMNIP--------VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~-~~~~~~~~~p--------~~~~~~~~~p~g~ 138 (139)
.++||+|++ ...+ ...++ ....++.++|+|.
T Consensus 126 ~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~ 165 (236)
T 1zx0_A 126 DGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGV 165 (236)
T ss_dssp TTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEE
T ss_pred CCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeE
Confidence 578999999 4432 22222 4455778888874
No 93
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.49 E-value=8.5e-14 Score=98.75 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=74.4
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.++++.+|||+|||+|.++..+++... +++++|+|+.+++.++++ ++++.+|+.+.. .+.
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~----~~~ 97 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYL----KSL 97 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT-------------SEEECSCHHHHH----HTS
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh-------------cceeeccHHHHh----hhc
Confidence 457789999999999999999999853 899999999999887653 567788855422 133
Q ss_pred cCCceeEEecCccccccccc-----eeeeeeeccCCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGSY 139 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~~ 139 (139)
+.++||+|+++.++||+.++ ....++.++|+|.+
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 136 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYI 136 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCE
T ss_pred CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEE
Confidence 45789999999999999866 34447889999863
No 94
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.49 E-value=4.6e-14 Score=101.38 Aligned_cols=98 Identities=9% Similarity=-0.000 Sum_probs=72.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh-c
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM-M 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~ 105 (139)
.++.+|||+|||+|..+..++... +.++|+++|+++.+++.|+++... ++ .+++++++|+.+ +... .
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~----~~~~~~ 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEV----LAREAG 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHH----HTTSTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHH----hhcccc
Confidence 467899999999999999999987 467999999999999999999988 54 679999999554 2111 1
Q ss_pred cCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
..++||+|+++..-.+ ........+.++|+|
T Consensus 148 ~~~~fD~I~s~a~~~~-~~ll~~~~~~LkpgG 178 (249)
T 3g89_A 148 HREAYARAVARAVAPL-CVLSELLLPFLEVGG 178 (249)
T ss_dssp TTTCEEEEEEESSCCH-HHHHHHHGGGEEEEE
T ss_pred cCCCceEEEECCcCCH-HHHHHHHHHHcCCCe
Confidence 1367999999865322 222233344455554
No 95
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.49 E-value=1.1e-13 Score=101.80 Aligned_cols=100 Identities=19% Similarity=0.249 Sum_probs=75.5
Q ss_pred hhcccc-cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccc
Q psy5757 5 KIGAAI-GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLL 82 (139)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~ 82 (139)
.+|+.+ ..+.+...+++.+. ..++.+|||+|||+|.++..+++... +++++|+++.+++.+++++.. +.
T Consensus 19 ~~Gq~fl~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~~---~v~~vDi~~~~~~~a~~~~~~~~~---- 89 (299)
T 2h1r_A 19 FQGQHLLKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLAK---KVITIDIDSRMISEVKKRCLYEGY---- 89 (299)
T ss_dssp ----CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTSS---EEEEECSCHHHHHHHHHHHHHTTC----
T ss_pred ccccceecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCC----
Confidence 467755 47777888888875 57788999999999999999998753 999999999999999999876 33
Q ss_pred cCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 83 TDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 83 ~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
++++++.+|+.+ + +..+||+|++|++++|..
T Consensus 90 --~~v~~~~~D~~~-~-------~~~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 90 --NNLEVYEGDAIK-T-------VFPKFDVCTANIPYKISS 120 (299)
T ss_dssp --CCEEC----CCS-S-------CCCCCSEEEEECCGGGHH
T ss_pred --CceEEEECchhh-C-------CcccCCEEEEcCCccccc
Confidence 689999999654 1 234799999999987654
No 96
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.49 E-value=2.7e-14 Score=99.06 Aligned_cols=91 Identities=12% Similarity=0.213 Sum_probs=72.8
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
.+...+..++.++.+|||+|||+|.++..+++.... +++++|+++.+++.++++... ..+++++++|+.+
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~- 100 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRK- 100 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTS-
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhc-
Confidence 455666656688899999999999999999998632 899999999999999988754 3678999999654
Q ss_pred hHHHhhhccCCceeEEecCccccccc
Q psy5757 98 IETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
+ ..+.++||+|+++.+++++.
T Consensus 101 ~-----~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 101 L-----DFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp C-----CSCSSCEEEEEEESHHHHHT
T ss_pred C-----CCCCCcccEEEECcchhhhc
Confidence 1 22346799999998887654
No 97
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.49 E-value=8.3e-14 Score=102.66 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=78.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++..+. +++++|+++.+++.++++... +. ..+++++.+|+.+ +
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~----~---- 152 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASIDT-----NRSRQVLLQGWED----F---- 152 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCGGG----C----
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECChHH----C----
Confidence 467889999999999999999998633 999999999999999999887 44 3579999999543 1
Q ss_pred cCCceeEEecCccccccc--cce---eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMN--IPV---CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~--~p~---~~~~~~~~p~g~ 138 (139)
.++||+|++..++|++. ++. ....+.++|+|.
T Consensus 153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 189 (318)
T 2fk8_A 153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGR 189 (318)
T ss_dssp -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCE
T ss_pred -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcE
Confidence 16799999999999994 332 334778888885
No 98
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.49 E-value=5.3e-14 Score=100.21 Aligned_cols=113 Identities=17% Similarity=0.134 Sum_probs=76.5
Q ss_pred HHHHHHHhcc-cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQP-HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~-~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+.. .++++.+|||+|||+|.++..+++..++.++|+++|+++.+++.+.+..+. ..|+.++++|+
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-------r~nv~~i~~Da 134 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-------RPNIFPLLADA 134 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-------CTTEEEEECCT
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-------cCCeEEEEccc
Confidence 3444444431 257899999999999999999999987788999999999987666554433 26899999997
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccceeee-eeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVCIN-YTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~-~~~~~p~g~ 138 (139)
.+... . ....++||+|+++.+..+........ .+.++|+|.
T Consensus 135 ~~~~~-~--~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~ 176 (232)
T 3id6_C 135 RFPQS-Y--KSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGD 176 (232)
T ss_dssp TCGGG-T--TTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEE
T ss_pred ccchh-h--hccccceEEEEecCCChhHHHHHHHHHHHhCCCCeE
Confidence 65211 1 11135799999997753222111112 225666664
No 99
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.49 E-value=2.8e-14 Score=100.22 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=78.7
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.++++.+|||+|||+|..+..+++... +++++|+++.+++.++++... +.. .....+++++.+|+.+ + .
T Consensus 27 ~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~d~~~-~-----~ 96 (235)
T 3sm3_A 27 YLQEDDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLN-QKTGGKAEFKVENASS-L-----S 96 (235)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCC-SSSSCEEEEEECCTTS-C-----C
T ss_pred hCCCCCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCc-cccCcceEEEEecccc-c-----C
Confidence 457889999999999999999999843 999999999999999998876 320 0011368999999654 1 2
Q ss_pred ccCCceeEEecCccccccccce------eeeeeeccCCCC
Q psy5757 105 MKFDRYDFLPHAPAESWMNIPV------CINYTATMPEGS 138 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~p~------~~~~~~~~p~g~ 138 (139)
.+.++||+|+++.++|++.++. ...++.++|+|.
T Consensus 97 ~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~ 136 (235)
T 3sm3_A 97 FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAY 136 (235)
T ss_dssp SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeE
Confidence 2356899999999999998764 223566677764
No 100
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.49 E-value=2.8e-14 Score=99.70 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=80.1
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchh
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIK 96 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~ 96 (139)
..++..+. ..++.+|||+|||+|..+..+++... +++++|+++.+++.++++.. .+++++.+|+.+
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSS
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhh
Confidence 34555554 35788999999999999999999843 99999999999999988752 367889999655
Q ss_pred hhHHHhhhccCCceeEEecCcccccccccee-----eeeeeccCCCC
Q psy5757 97 RIETVELMMKFDRYDFLPHAPAESWMNIPVC-----INYTATMPEGS 138 (139)
Q Consensus 97 ~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~-----~~~~~~~p~g~ 138 (139)
+ ..+ ++||+|+++.++|++.++.. ...+.++|+|.
T Consensus 101 -~-----~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 140 (220)
T 3hnr_A 101 -F-----EVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGK 140 (220)
T ss_dssp -C-----CCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCE
T ss_pred -c-----CCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCE
Confidence 2 122 68999999999999998753 44788889885
No 101
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.49 E-value=1.3e-13 Score=109.42 Aligned_cols=88 Identities=13% Similarity=0.136 Sum_probs=73.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+..+.+|||+|||.|.++..|++.+. +|+|+|.++.+++.|+..+.. +. -++++.++++.+ +....
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~------~~~~~~~~~~~~----~~~~~ 130 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPD------FAAEFRVGRIEE----VIAAL 130 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTT------SEEEEEECCHHH----HHHHC
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCC------CceEEEECCHHH----Hhhhc
Confidence 45567999999999999999999875 999999999999999998876 43 479999999544 32233
Q ss_pred cCCceeEEecCcccccccccee
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVC 127 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~ 127 (139)
..++||+|++..++||+++|..
T Consensus 131 ~~~~fD~v~~~e~~ehv~~~~~ 152 (569)
T 4azs_A 131 EEGEFDLAIGLSVFHHIVHLHG 152 (569)
T ss_dssp CTTSCSEEEEESCHHHHHHHHC
T ss_pred cCCCccEEEECcchhcCCCHHH
Confidence 4568999999999999998753
No 102
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.48 E-value=1.5e-14 Score=102.34 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=73.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
++.+|||+|||+|..+..+++.. .+++++|+++.+++.|+++... +. ..+++++++|+.+ +. +.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~------~~ 130 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPK-----AEYFSFVKEDVFT-WR------PT 130 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGG-----GGGEEEECCCTTT-CC------CS
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCC-----CcceEEEECchhc-CC------CC
Confidence 44599999999999999997743 4899999999999999999876 33 3679999999655 11 34
Q ss_pred CceeEEecCccccccc--cce---eeeeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMN--IPV---CINYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~--~p~---~~~~~~~~p~g~ 138 (139)
++||+|+++.++|+++ ++. ...++.++|+|.
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 166 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGE 166 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEE
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcE
Confidence 5899999999999987 332 333556666663
No 103
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.48 E-value=2.9e-13 Score=98.49 Aligned_cols=102 Identities=15% Similarity=0.148 Sum_probs=77.5
Q ss_pred CCCeEEEEcccC---ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHH-----
Q psy5757 29 ENSKVLEIGSGS---GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIET----- 100 (139)
Q Consensus 29 ~~~~iLdiG~G~---G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----- 100 (139)
...+|||+|||+ |.++..+.+.. +.++|+++|+|+.+++.|++++.. ..+++++.+|+.+.-..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhccch
Confidence 447999999999 98877666655 567999999999999999998754 36799999998752110
Q ss_pred HhhhccCCceeEEecCcccccccc--c---eeeeeeeccCCCC
Q psy5757 101 VELMMKFDRYDFLPHAPAESWMNI--P---VCINYTATMPEGS 138 (139)
Q Consensus 101 ~~~~~~~~~~D~vi~~~~~~~~~~--p---~~~~~~~~~p~g~ 138 (139)
+....+++++|+|+++.++||+.+ + ....++.++|+|.
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~ 191 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSY 191 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCE
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcE
Confidence 001233458999999999999987 3 3344777888875
No 104
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.48 E-value=4.9e-14 Score=100.03 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=75.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
++.+|||+|||+|..+..+++... .+++++|+++.+++.|++++.. +. .+++++.+|+.+ + ..+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~-~-----~~~~ 144 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGK------RVRNYFCCGLQD-F-----TPEP 144 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGG------GEEEEEECCGGG-C-----CCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCC------ceEEEEEcChhh-c-----CCCC
Confidence 578999999999999999988763 3999999999999999998876 22 578999999544 1 1234
Q ss_pred CceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
++||+|+++.++|++.++. ...++.++|+|.
T Consensus 145 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 180 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGI 180 (241)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeE
Confidence 5799999999999998753 233566677664
No 105
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.48 E-value=3.3e-14 Score=103.86 Aligned_cols=106 Identities=13% Similarity=0.096 Sum_probs=70.9
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc---CCCceE--EEEeCCHHHHHHHHHHHHh-hccccccCCcEEE--EEccchhhhH
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM---NSTGQV--IGIEHVPQLVNSSIQNILH-SNARLLTDGHIKF--VALGMIKRIE 99 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~---~~~~~v--~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~--~~~d~~~~~~ 99 (139)
.++.+|||+|||+|..+..++... .+..++ +++|+|++|++.|++++.. .. ..++.+ ..++..+...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-----~~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN-----LENVKFAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS-----CTTEEEEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC-----CCcceEEEEecchhhhhh
Confidence 356799999999998776544322 134444 9999999999999998765 11 144544 4555332111
Q ss_pred HHhhhccCCceeEEecCccccccccce---eeeeeeccCCCC
Q psy5757 100 TVELMMKFDRYDFLPHAPAESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 100 ~~~~~~~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~p~g~ 138 (139)
......+.++||+|+++.++||+++|. ...++.++|+|.
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~ 167 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAK 167 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEE
T ss_pred hhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcE
Confidence 110112356899999999999999874 344778888874
No 106
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.48 E-value=6.1e-14 Score=97.71 Aligned_cols=99 Identities=10% Similarity=-0.027 Sum_probs=72.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++..++.++++++|+++.+++.|++++.. +. ..+++++++|+.+.++ . .
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~----~-~ 124 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----IDRVELQVGDPLGIAA----G-Q 124 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----GGGEEEEESCHHHHHT----T-C
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CceEEEEEecHHHHhc----c-C
Confidence 4668999999999999999999875467999999999999999999887 54 3579999999655322 1 1
Q ss_pred CCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
.+ ||+|+++.............++.++|+|
T Consensus 125 ~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG 154 (210)
T 3c3p_A 125 RD-IDILFMDCDVFNGADVLERMNRCLAKNA 154 (210)
T ss_dssp CS-EEEEEEETTTSCHHHHHHHHGGGEEEEE
T ss_pred CC-CCEEEEcCChhhhHHHHHHHHHhcCCCe
Confidence 35 9999987653322222333344455554
No 107
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.48 E-value=5.3e-14 Score=97.49 Aligned_cols=109 Identities=16% Similarity=0.056 Sum_probs=77.4
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccc
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGM 94 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~ 94 (139)
...+.++.+. ...++.+|||+|||+|..+..++... ..+++++|+|+.+++.+++++.... .+++++++|+
T Consensus 10 ~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~ 80 (209)
T 2p8j_A 10 QLYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN------FKLNISKGDI 80 (209)
T ss_dssp HHHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCT
T ss_pred hHHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC------CceEEEECch
Confidence 3455566554 35678899999999999865554443 2399999999999999999887621 4688899996
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccc--cce---eeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMN--IPV---CINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~--~p~---~~~~~~~~p~g~ 138 (139)
.+ + +.+.++||+|+++.++|++. ++. ...++.++|+|.
T Consensus 81 ~~-~-----~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 123 (209)
T 2p8j_A 81 RK-L-----PFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGL 123 (209)
T ss_dssp TS-C-----CSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred hh-C-----CCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcE
Confidence 54 1 22356899999999988883 332 223556666653
No 108
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=1.4e-13 Score=98.29 Aligned_cols=91 Identities=15% Similarity=0.244 Sum_probs=72.8
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEcc
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALG 93 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d 93 (139)
....+...+. +.++.+|||+|||+|.++..+++...+.++++++|+++.+++.|++++.. +. ..+++++++|
T Consensus 81 ~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d 153 (255)
T 3mb5_A 81 DAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----DDRVTIKLKD 153 (255)
T ss_dssp HHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----TTTEEEECSC
T ss_pred HHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----CCceEEEECc
Confidence 3445555553 57889999999999999999999965667999999999999999999987 54 2449999999
Q ss_pred chhhhHHHhhhccCCceeEEecCccc
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~ 119 (139)
+.+. .+.++||+|+++++-
T Consensus 154 ~~~~-------~~~~~~D~v~~~~~~ 172 (255)
T 3mb5_A 154 IYEG-------IEEENVDHVILDLPQ 172 (255)
T ss_dssp GGGC-------CCCCSEEEEEECSSC
T ss_pred hhhc-------cCCCCcCEEEECCCC
Confidence 6642 234679999998763
No 109
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.48 E-value=4.9e-14 Score=103.79 Aligned_cols=121 Identities=13% Similarity=0.051 Sum_probs=79.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcccc-ccCCcEEEEEcc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARL-LTDGHIKFVALG 93 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~-~~~~~i~~~~~d 93 (139)
+..+++.+.....++.+|||+|||+|..+..+++.. ..+++++|+++.+++.++++... +.+.. ....+++++++|
T Consensus 21 ~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 21 IGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 444555554334577899999999999999999853 44999999999999999998765 20000 012478999999
Q ss_pred chhhhHHHhhhccCCceeEEecCcccccc-ccc------eeeeeeeccCCCC
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAESWM-NIP------VCINYTATMPEGS 138 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~~~~-~~p------~~~~~~~~~p~g~ 138 (139)
+.+....-....+.++||+|+++.++||+ .++ .....+.++|+|.
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~ 150 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGY 150 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEE
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcE
Confidence 65411000011123489999999999998 332 2333666777764
No 110
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.48 E-value=6.9e-14 Score=99.56 Aligned_cols=96 Identities=17% Similarity=0.191 Sum_probs=75.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|..+..+++... .+++++|+++.+++.++++... ..+++++++|+.+ + ..+.
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~-~-----~~~~ 156 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAG-------MPVGKFILASMET-A-----TLPP 156 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTT-------SSEEEEEESCGGG-C-----CCCS
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccHHH-C-----CCCC
Confidence 5678999999999999999998863 2799999999999999998755 2578999999654 1 2235
Q ss_pred CceeEEecCcccccccc--c---eeeeeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNI--P---VCINYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~--p---~~~~~~~~~p~g~ 138 (139)
++||+|++..++|++.+ + ....++.++|+|.
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 192 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGY 192 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeE
Confidence 68999999999999853 2 2333566666663
No 111
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.47 E-value=7.1e-14 Score=98.81 Aligned_cols=95 Identities=15% Similarity=0.229 Sum_probs=74.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|..+..+++... .+++++|+++.+++.++++... .+++++++|+.+ + ..+.
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~-~-----~~~~ 105 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPD--------TGITYERADLDK-L-----HLPQ 105 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGG-C-----CCCT
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhh-c-----cCCC
Confidence 5778999999999999999998742 2899999999999999887644 578999999654 1 1235
Q ss_pred CceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
++||+|+++.++|++.++... .++.++|+|.
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 139 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGH 139 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcE
Confidence 689999999999999776422 2556666653
No 112
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=4.8e-14 Score=102.18 Aligned_cols=99 Identities=19% Similarity=0.327 Sum_probs=76.8
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
.+++.+. ..++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++. ++++++++|+.+
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~- 111 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNY----------PHLHFDVADARN- 111 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTT-
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhh-
Confidence 4455553 467789999999999999999983 349999999999999998764 467788898654
Q ss_pred hHHHhhhccCCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 98 IETVELMMKFDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
++ ..++||+|+++.++||+.++.. ..++.++|+|.
T Consensus 112 ~~------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~ 149 (279)
T 3ccf_A 112 FR------VDKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGR 149 (279)
T ss_dssp CC------CSSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred CC------cCCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcE
Confidence 22 1367999999999999988743 23666777764
No 113
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.47 E-value=6.6e-14 Score=101.87 Aligned_cols=103 Identities=12% Similarity=0.084 Sum_probs=77.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++... +++|+|+|+.+++.|+++... ... ....++.+..+|+.+....+ .+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~---~~ 127 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKE--PAFDKWVIEEANWLTLDKDV---PA 127 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCEEEECCGGGHHHHS---CC
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccc--cccceeeEeecChhhCcccc---cc
Confidence 5678999999999999999999853 999999999999999887643 110 01257888899865421111 24
Q ss_pred CCceeEEecC-cccccccc-------c---eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHA-PAESWMNI-------P---VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~-~~~~~~~~-------p---~~~~~~~~~p~g~ 138 (139)
.++||+|+++ .++|++.+ + ....++.++|+|.
T Consensus 128 ~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 170 (293)
T 3thr_A 128 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGL 170 (293)
T ss_dssp TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEE
T ss_pred CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeE
Confidence 5689999998 89999988 3 2344777788774
No 114
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.47 E-value=1.9e-13 Score=105.08 Aligned_cols=115 Identities=10% Similarity=-0.006 Sum_probs=82.4
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHH-------HHHHHh-hccccccC
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSS-------IQNILH-SNARLLTD 84 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a-------~~~~~~-~~~~~~~~ 84 (139)
+..+..+++.+. +.++.+|||+|||+|.++..+++..+ ..+++|+|+++.+++.| ++++.. ++ ..
T Consensus 228 p~~v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl----~~ 300 (433)
T 1u2z_A 228 PNFLSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGM----RL 300 (433)
T ss_dssp HHHHHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB----CC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC----CC
Confidence 666778887774 67889999999999999999999874 34899999999999998 777766 42 12
Q ss_pred CcEEEEEccch-hhhHHHhhhccCCceeEEecCccccccccc---eeeeeeeccCCCC
Q psy5757 85 GHIKFVALGMI-KRIETVELMMKFDRYDFLPHAPAESWMNIP---VCINYTATMPEGS 138 (139)
Q Consensus 85 ~~i~~~~~d~~-~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p---~~~~~~~~~p~g~ 138 (139)
.+++++++|.. +.+. +.. ...+||+|+++..++ ..++ ....++.++|+|.
T Consensus 301 ~nV~~i~gD~~~~~~~-~~~--~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpGG~ 354 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNR-VAE--LIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGCK 354 (433)
T ss_dssp CCEEEEESSCSTTCHH-HHH--HGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTCE
T ss_pred CceEEEEcCccccccc-ccc--ccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCCeE
Confidence 68999987543 2111 101 135699999986653 2332 2455777888875
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.47 E-value=7e-14 Score=99.48 Aligned_cols=99 Identities=10% Similarity=0.095 Sum_probs=72.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh-c
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM-M 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~ 105 (139)
.++.+|||+|||+|..+..++... +..+++++|+++.+++.|+++... ++ .+++++++|+.+ +... .
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~----~~~~~~ 137 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAET----FGQRKD 137 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHH----HTTCTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHH----hccccc
Confidence 467899999999999999999865 456999999999999999999887 54 679999999544 2111 1
Q ss_pred cCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
..++||+|++... ..........++.++|+|.
T Consensus 138 ~~~~fD~V~~~~~-~~~~~~l~~~~~~LkpgG~ 169 (240)
T 1xdz_A 138 VRESYDIVTARAV-ARLSVLSELCLPLVKKNGL 169 (240)
T ss_dssp TTTCEEEEEEECC-SCHHHHHHHHGGGEEEEEE
T ss_pred ccCCccEEEEecc-CCHHHHHHHHHHhcCCCCE
Confidence 1357999999774 2122222333455666653
No 116
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.47 E-value=1.3e-13 Score=105.26 Aligned_cols=118 Identities=8% Similarity=0.067 Sum_probs=83.0
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-h-cccc--ccCCcEE
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-S-NARL--LTDGHIK 88 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~-~~~~--~~~~~i~ 88 (139)
+..+..+++.+. +.++.+|||+|||+|..+..++...+. .+++|+|+++.+++.|+++... . .... +...+++
T Consensus 159 ~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 159 FDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 334666777664 688999999999999999999987643 3699999999999999876532 0 0000 1126899
Q ss_pred EEEccchhhhHHHhhhccCCceeEEecCccccccccc---eeeeeeeccCCCC
Q psy5757 89 FVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIP---VCINYTATMPEGS 138 (139)
Q Consensus 89 ~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p---~~~~~~~~~p~g~ 138 (139)
++++|+.+ ++ .....+.+|+|++|+.+++ +++ +...++.++|+|.
T Consensus 236 fi~GD~~~-lp---~~d~~~~aDVVf~Nn~~F~-pdl~~aL~Ei~RvLKPGGr 283 (438)
T 3uwp_A 236 LERGDFLS-EE---WRERIANTSVIFVNNFAFG-PEVDHQLKERFANMKEGGR 283 (438)
T ss_dssp EEECCTTS-HH---HHHHHHTCSEEEECCTTCC-HHHHHHHHHHHTTSCTTCE
T ss_pred EEECcccC-Cc---cccccCCccEEEEcccccC-chHHHHHHHHHHcCCCCcE
Confidence 99999766 22 1111246999999988654 222 3334788899885
No 117
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.47 E-value=2.5e-13 Score=101.84 Aligned_cols=109 Identities=15% Similarity=0.119 Sum_probs=80.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++.... .+++.++||+|||+|.++..++....+..+++|+|+++.+++.|++++.. +. ++++++++|+
T Consensus 192 a~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~------~~i~~~~~D~ 263 (354)
T 3tma_A 192 AQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL------SWIRFLRADA 263 (354)
T ss_dssp HHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC------TTCEEEECCG
T ss_pred HHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC------CceEEEeCCh
Confidence 334444443 56788999999999999999999874456999999999999999999988 55 4899999997
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccccc-----------eeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIP-----------VCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p-----------~~~~~~~~~p~g~ 138 (139)
.+ +. .+.+.||+|++|+++++.... .....+.++|+|.
T Consensus 264 ~~-~~-----~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~ 312 (354)
T 3tma_A 264 RH-LP-----RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGR 312 (354)
T ss_dssp GG-GG-----GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCE
T ss_pred hh-Cc-----cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcE
Confidence 65 22 124568999999998764431 1223556667774
No 118
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=3.3e-13 Score=97.35 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=76.7
Q ss_pred hhcc-cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT 83 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~ 83 (139)
.+|+ ++..+.++.++++.+. ..++.+|||+|||+|.++..+++... +|+++|+|+.+++.+++++..
T Consensus 6 ~~GQnFL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~---~V~avEid~~~~~~~~~~~~~------- 73 (255)
T 3tqs_A 6 RFGQHFLHDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTECD---NLALVEIDRDLVAFLQKKYNQ------- 73 (255)
T ss_dssp ---CCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTSS---EEEEEECCHHHHHHHHHHHTT-------
T ss_pred cCCcccccCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHhh-------
Confidence 4677 4567778888998886 57888999999999999999999864 999999999999999998765
Q ss_pred CCcEEEEEccchhh-hHHHhhhccCCceeEEecCccc
Q psy5757 84 DGHIKFVALGMIKR-IETVELMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 84 ~~~i~~~~~d~~~~-~~~~~~~~~~~~~D~vi~~~~~ 119 (139)
.++++++++|+.+. ++.+ ...+.+| |++|+++
T Consensus 74 ~~~v~~i~~D~~~~~~~~~---~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 74 QKNITIYQNDALQFDFSSV---KTDKPLR-VVGNLPY 106 (255)
T ss_dssp CTTEEEEESCTTTCCGGGS---CCSSCEE-EEEECCH
T ss_pred CCCcEEEEcchHhCCHHHh---ccCCCeE-EEecCCc
Confidence 36899999997762 1211 1124688 8888873
No 119
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.47 E-value=7.1e-14 Score=96.55 Aligned_cols=97 Identities=10% Similarity=-0.050 Sum_probs=74.2
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
++.+..+|||+|||+|.++..++... |.++++++|+|+.+++.+++++.. +. ..++.+ .|... .
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~-----~~~v~~--~d~~~-------~ 110 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKT-----TIKYRF--LNKES-------D 110 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCC-----SSEEEE--ECCHH-------H
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCC-----CccEEE--ecccc-------c
Confidence 45778899999999999999999987 567999999999999999999988 54 125655 55332 1
Q ss_pred ccCCceeEEecCccccccccceeee---eeeccCCC
Q psy5757 105 MKFDRYDFLPHAPAESWMNIPVCIN---YTATMPEG 137 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~p~~~~---~~~~~p~g 137 (139)
.+.++||+|++...+|.+.+..+.. +..++|+|
T Consensus 111 ~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pgg 146 (200)
T 3fzg_A 111 VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQN 146 (200)
T ss_dssp HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEE
T ss_pred CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCC
Confidence 2457799999999999996543322 45555554
No 120
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.47 E-value=8e-14 Score=98.50 Aligned_cols=107 Identities=7% Similarity=0.088 Sum_probs=79.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+.+.+.....++.+|||+|||+|..+..+++... +++++|+++.+++.++++..... .+++++++|+.
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~d~~ 94 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDIS 94 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCGG
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcC------CCeEEEecccc
Confidence 4455555543334778999999999999999998853 89999999999999999887611 27889999965
Q ss_pred hhhHHHhhhccCCceeEEecCc-ccccccc---ce---eeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAP-AESWMNI---PV---CINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~-~~~~~~~---p~---~~~~~~~~p~g~ 138 (139)
+ + ..+ ++||+|+++. ++|++.+ +. ...++.++|+|.
T Consensus 95 ~-~-----~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~ 137 (246)
T 1y8c_A 95 N-L-----NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGV 137 (246)
T ss_dssp G-C-----CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEE
T ss_pred c-C-----Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcE
Confidence 4 1 112 6799999998 9999843 22 223566666663
No 121
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.46 E-value=5.4e-14 Score=103.67 Aligned_cols=108 Identities=11% Similarity=0.082 Sum_probs=72.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhh--HHHhhhc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRI--ETVELMM 105 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~--~~~~~~~ 105 (139)
++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|+++... +........++++.+.|+.... .++....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 47899999999998777666543 23899999999999999998765 3200000013678788753211 2332233
Q ss_pred cCCceeEEecCccccccccc------eeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIP------VCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p------~~~~~~~~~p~g~ 138 (139)
+.++||+|++..++||+.++ ....++.++|+|.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~ 164 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGK 164 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCE
Confidence 45789999999999986432 3334777888874
No 122
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.46 E-value=7.5e-14 Score=101.67 Aligned_cols=97 Identities=13% Similarity=0.031 Sum_probs=73.5
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.++++.+|||+|||+|.++..+++.... +|+++|+++.+++.|++++.. +. ..+++++++|+.+..
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~-----~~~v~~~~~D~~~~~------ 188 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFP------ 188 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCC------
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECCHHHhc------
Confidence 3577899999999999999999998753 799999999999999999987 54 245999999976521
Q ss_pred ccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 105 MKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
..++||+|+++++.+. .......++.++|+|
T Consensus 189 -~~~~fD~Vi~~~p~~~-~~~l~~~~~~LkpgG 219 (278)
T 2frn_A 189 -GENIADRILMGYVVRT-HEFIPKALSIAKDGA 219 (278)
T ss_dssp -CCSCEEEEEECCCSSG-GGGHHHHHHHEEEEE
T ss_pred -ccCCccEEEECCchhH-HHHHHHHHHHCCCCe
Confidence 1467999999988443 122222344455554
No 123
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.46 E-value=8.7e-14 Score=97.53 Aligned_cols=101 Identities=13% Similarity=0.127 Sum_probs=71.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
++++.+|||+|||+|..+..+++..+ .++|+|+|+|+.+++.+.+..+. ..++.++++|+.+. ... .. .
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~-------~~~v~~~~~d~~~~-~~~-~~-~ 123 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE-------RNNIIPLLFDASKP-WKY-SG-I 123 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH-------CSSEEEECSCTTCG-GGT-TT-T
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc-------CCCeEEEEcCCCCc-hhh-cc-c
Confidence 46788999999999999999999885 66999999999988777665544 25788888886542 110 01 1
Q ss_pred CCceeEEecCccccccccc-eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIP-VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p-~~~~~~~~~p~g~ 138 (139)
.++||+|+++...+..... ....++.++|+|.
T Consensus 124 ~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~ 156 (210)
T 1nt2_A 124 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGE 156 (210)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEE
T ss_pred ccceeEEEEeccChhHHHHHHHHHHHHhCCCCE
Confidence 2679999998543311111 2344777888774
No 124
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=4.5e-14 Score=97.60 Aligned_cols=90 Identities=21% Similarity=0.199 Sum_probs=71.7
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCc
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDR 109 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~ 109 (139)
+.+|||+|||+|..+..+++... +++++|+++.+++.++++. .+++++++|+.+ + +.+.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~-~-----~~~~~~ 102 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTH----------PSVTFHHGTITD-L-----SDSPKR 102 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHC----------TTSEEECCCGGG-G-----GGSCCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccc-c-----ccCCCC
Confidence 78999999999999999999843 8999999999999998873 578899999654 2 223578
Q ss_pred eeEEecCccccccc--cce---eeeeeeccCCCC
Q psy5757 110 YDFLPHAPAESWMN--IPV---CINYTATMPEGS 138 (139)
Q Consensus 110 ~D~vi~~~~~~~~~--~p~---~~~~~~~~p~g~ 138 (139)
||+|+++.++|++. ++. ...++.++|+|.
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~ 136 (203)
T 3h2b_A 103 WAGLLAWYSLIHMGPGELPDALVALRMAVEDGGG 136 (203)
T ss_dssp EEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEE
T ss_pred eEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcE
Confidence 99999999999986 332 333566666663
No 125
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.46 E-value=1e-12 Score=91.02 Aligned_cols=101 Identities=19% Similarity=0.110 Sum_probs=76.8
Q ss_pred hcccccChHHHHHHHHHhccc-CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccC
Q psy5757 6 IGAAIGGISAILTYLSIIQPH-LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTD 84 (139)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~ 84 (139)
+++....+.....+...+... ..++.+|||+|||+|.++..+++... .+++++|+++.+++.+++++.... .
T Consensus 25 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~ 97 (207)
T 1wy7_A 25 LEQYRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFK-----G 97 (207)
T ss_dssp GTCCCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGT-----T
T ss_pred eeeecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcC-----C
Confidence 344455565666666555321 34678999999999999999998742 289999999999999999987611 2
Q ss_pred CcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 85 ~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
+++++++|+.+ + ..+||+|++|+++|+..
T Consensus 98 -~~~~~~~d~~~-~--------~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 98 -KFKVFIGDVSE-F--------NSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp -SEEEEESCGGG-C--------CCCCSEEEECCCCSSSS
T ss_pred -CEEEEECchHH-c--------CCCCCEEEEcCCCcccc
Confidence 79999999654 1 13799999999988765
No 126
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.45 E-value=1.8e-13 Score=99.43 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=78.4
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
.+++.+. ..++.+|||+|||+|..+..+++... +++++|+++.+++.+++++.... .+++++++|+.+
T Consensus 111 ~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~- 178 (286)
T 3m70_A 111 DVVDAAK--IISPCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKEN------LNISTALYDINA- 178 (286)
T ss_dssp HHHHHHH--HSCSCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCGGG-
T ss_pred HHHHHhh--ccCCCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcC------CceEEEEecccc-
Confidence 3444443 24778999999999999999999853 99999999999999999987721 278999999654
Q ss_pred hHHHhhhccCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 98 IETVELMMKFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
+. ..++||+|+++.++||+..+. ....+.++|+|.
T Consensus 179 ~~------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 179 AN------IQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp CC------CCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred cc------ccCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 11 146799999999999987553 223555666653
No 127
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.45 E-value=6.3e-14 Score=98.81 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=68.9
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
...++.+|||+|||+|..+..+++... +++++|+++.+++.++++ . ++++++++|+.+.++ .
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~--~--------~~~~~~~~d~~~~~~-----~ 106 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARAN--A--------PHADVYEWNGKGELP-----A 106 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHH--C--------TTSEEEECCSCSSCC-----T
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHh--C--------CCceEEEcchhhccC-----C
Confidence 357889999999999999999999843 999999999999999887 2 678899999643222 2
Q ss_pred c-CCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 106 K-FDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 106 ~-~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
+ .++||+|+++.. ........++.++|+|.
T Consensus 107 ~~~~~fD~v~~~~~---~~~~l~~~~~~LkpgG~ 137 (226)
T 3m33_A 107 GLGAPFGLIVSRRG---PTSVILRLPELAAPDAH 137 (226)
T ss_dssp TCCCCEEEEEEESC---CSGGGGGHHHHEEEEEE
T ss_pred cCCCCEEEEEeCCC---HHHHHHHHHHHcCCCcE
Confidence 3 468999999832 22223344566666664
No 128
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.45 E-value=7.5e-14 Score=105.96 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=66.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|.++..+++... +++++|+|+.+++.|++++.. +. +++++++|+.+... +
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~-------~v~~~~~D~~~~~~------~ 295 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANAL-------KAQALHSDVDEALT------E 295 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTTTTSC------T
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCC-------CeEEEEcchhhccc------c
Confidence 3678999999999999999999843 999999999999999999987 32 48899999765211 2
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|++|+++|+
T Consensus 296 ~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 296 EARFDIIVTNPPFHV 310 (381)
T ss_dssp TCCEEEEEECCCCCT
T ss_pred CCCeEEEEECCchhh
Confidence 468999999999998
No 129
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.45 E-value=5.1e-13 Score=92.85 Aligned_cols=92 Identities=16% Similarity=0.119 Sum_probs=70.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+.+.+.. ..++.+|||+|||+|..+..++.... .+|+++|+++.+++.|++++.. +. .+++++++|+
T Consensus 42 ~~~l~~~l~~-~~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~D~ 112 (202)
T 2fpo_A 42 RETLFNWLAP-VIVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKA------GNARVVNSNA 112 (202)
T ss_dssp HHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCH
T ss_pred HHHHHHHHHh-hcCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEECCH
Confidence 3344444432 12678999999999999998777653 2899999999999999999987 43 6899999996
Q ss_pred hhhhHHHhhhccCCceeEEecCccccc
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
.+.++ ...++||+|++++++|+
T Consensus 113 ~~~~~-----~~~~~fD~V~~~~p~~~ 134 (202)
T 2fpo_A 113 MSFLA-----QKGTPHNIVFVDPPFRR 134 (202)
T ss_dssp HHHHS-----SCCCCEEEEEECCSSST
T ss_pred HHHHh-----hcCCCCCEEEECCCCCC
Confidence 55222 13457999999999773
No 130
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=9.4e-14 Score=100.20 Aligned_cols=91 Identities=10% Similarity=0.182 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh---hccccccCCcEEEEEccchhhhHHH-h
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH---SNARLLTDGHIKFVALGMIKRIETV-E 102 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~---~~~~~~~~~~i~~~~~d~~~~~~~~-~ 102 (139)
..++.+|||+|||+|..+..++.+. +..+++++|+++.+++.|++++.. .- + .++++++++|+.+..... .
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~---l-~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAA---F-SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTT---T-GGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCC---C-cceEEEEeCCHHHHhhhhhh
Confidence 4567899999999999999999998 356999999999999999999764 11 1 246999999977632211 1
Q ss_pred hhccCCceeEEecCcccccc
Q psy5757 103 LMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~~~~ 122 (139)
...+.++||+|++|+++++.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp TTCCTTCEEEEEECCCC---
T ss_pred hccCCCCcCEEEECCCCcCC
Confidence 11235679999999988765
No 131
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.45 E-value=2e-13 Score=92.51 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=70.0
Q ss_pred cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEE
Q psy5757 9 AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIK 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~ 88 (139)
.++.+. ...+++.+.....++.+|||+|||+|.++..+++.. +++++|+|+.+++. . .+++
T Consensus 4 ~~P~~~-~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~------~--------~~~~ 64 (170)
T 3q87_B 4 YEPGED-TYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES------H--------RGGN 64 (170)
T ss_dssp CCCCHH-HHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT------C--------SSSC
T ss_pred cCcCcc-HHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc------c--------cCCe
Confidence 344443 556666664222567799999999999999999876 89999999999887 2 5678
Q ss_pred EEEccchhhhHHHhhhccCCceeEEecCccccccccc
Q psy5757 89 FVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIP 125 (139)
Q Consensus 89 ~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p 125 (139)
++++|+.+.+ +.++||+|++|+++|+..++
T Consensus 65 ~~~~d~~~~~-------~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 65 LVRADLLCSI-------NQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp EEECSTTTTB-------CGGGCSEEEECCCCBTTCCC
T ss_pred EEECChhhhc-------ccCCCCEEEECCCCccCCcc
Confidence 9999965522 23679999999999987665
No 132
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.45 E-value=3.9e-14 Score=102.50 Aligned_cols=108 Identities=12% Similarity=0.092 Sum_probs=74.4
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEc
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVAL 92 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~ 92 (139)
+.....+++.+. +.++.+|||+|||+|.++..+++... +|+++|+|+.+++.|++++.... .+.++...
T Consensus 31 ~~~~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~------v~~~~~~~ 99 (261)
T 3iv6_A 31 PSDRENDIFLEN--IVPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRC------VTIDLLDI 99 (261)
T ss_dssp CCHHHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSC------CEEEECCT
T ss_pred HHHHHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhcc------ceeeeeec
Confidence 345566666664 57889999999999999999999864 99999999999999999875510 12222222
Q ss_pred cchhhhHHHhhhccCCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 93 GMIKRIETVELMMKFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 93 d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
+.. .. ....++||+|+++.++|++..+ ....++.+ |+|.
T Consensus 100 ~~~--~~----~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~ 143 (261)
T 3iv6_A 100 TAE--IP----KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGT 143 (261)
T ss_dssp TSC--CC----GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSE
T ss_pred ccc--cc----cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcE
Confidence 210 00 0113579999999999987532 23335566 8874
No 133
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=4e-13 Score=95.43 Aligned_cols=83 Identities=17% Similarity=0.224 Sum_probs=66.9
Q ss_pred hcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHH
Q psy5757 23 IQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETV 101 (139)
Q Consensus 23 l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~ 101 (139)
+..+++++.+|+|+|||+|.++..+++.. +..+|+++|+++.+++.|++++.. ++ ..+++++++|..+.+.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl-----~~~I~~~~gD~l~~~~-- 86 (230)
T 3lec_A 15 VANYVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGL-----TSKIDVRLANGLSAFE-- 86 (230)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCC--
T ss_pred HHHhCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECchhhccc--
Confidence 34456888999999999999999999986 455899999999999999999988 65 4579999999766432
Q ss_pred hhhccCCceeEEecCc
Q psy5757 102 ELMMKFDRYDFLPHAP 117 (139)
Q Consensus 102 ~~~~~~~~~D~vi~~~ 117 (139)
+.++||+|+...
T Consensus 87 ----~~~~~D~IviaG 98 (230)
T 3lec_A 87 ----EADNIDTITICG 98 (230)
T ss_dssp ----GGGCCCEEEEEE
T ss_pred ----cccccCEEEEeC
Confidence 123699876433
No 134
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.44 E-value=4.1e-13 Score=95.16 Aligned_cols=84 Identities=18% Similarity=0.226 Sum_probs=67.3
Q ss_pred HhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHH
Q psy5757 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIET 100 (139)
Q Consensus 22 ~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~ 100 (139)
.+..+++++.+|+|+|||+|.++..+++.. +..+|+++|+++.+++.|++++.. ++ ..+++++.+|..+.++
T Consensus 8 ~l~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~i~~~~~d~l~~l~- 80 (225)
T 3kr9_A 8 LVASFVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGL-----KEKIQVRLANGLAAFE- 80 (225)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCC-
T ss_pred HHHHhCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECchhhhcc-
Confidence 334456888999999999999999999986 456899999999999999999998 65 3579999999765332
Q ss_pred HhhhccCCceeEEecCc
Q psy5757 101 VELMMKFDRYDFLPHAP 117 (139)
Q Consensus 101 ~~~~~~~~~~D~vi~~~ 117 (139)
+.++||+|+...
T Consensus 81 -----~~~~~D~IviaG 92 (225)
T 3kr9_A 81 -----ETDQVSVITIAG 92 (225)
T ss_dssp -----GGGCCCEEEEEE
T ss_pred -----cCcCCCEEEEcC
Confidence 112699887544
No 135
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.44 E-value=3.7e-14 Score=95.47 Aligned_cols=90 Identities=11% Similarity=0.113 Sum_probs=72.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
..++.+|||+|||+|..+..+++... +++++|+++.+++.++++ . ++++++.+| . +.+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~--~--------~~v~~~~~d----~-----~~~ 72 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEK--F--------DSVITLSDP----K-----EIP 72 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHH--C--------TTSEEESSG----G-----GSC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHh--C--------CCcEEEeCC----C-----CCC
Confidence 56778999999999999999999884 999999999999999887 2 678888887 1 123
Q ss_pred CCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
.++||+|+++.++|++.++.. ..++.++|+|.
T Consensus 73 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 107 (170)
T 3i9f_A 73 DNSVDFILFANSFHDMDDKQHVISEVKRILKDDGR 107 (170)
T ss_dssp TTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEE
T ss_pred CCceEEEEEccchhcccCHHHHHHHHHHhcCCCCE
Confidence 568999999999999987643 23566666663
No 136
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=8.3e-14 Score=100.15 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=77.5
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEc
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVAL 92 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~ 92 (139)
+.....+.+.+. ..++.+|||+|||+|..+..+++. .++++|+|+|+.+++.++++ .+++++++
T Consensus 20 ~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~~ 83 (261)
T 3ege_A 20 IRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVH-----------PQVEWFTG 83 (261)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCC-----------TTEEEECC
T ss_pred HHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhc-----------cCCEEEEC
Confidence 344555555554 467889999999999999999983 34999999999888766443 37899999
Q ss_pred cchhhhHHHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 93 GMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 93 d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
|+.+ + +.+.++||+|+++.++|++.++... .++.++ +|.
T Consensus 84 d~~~-~-----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~ 125 (261)
T 3ege_A 84 YAEN-L-----ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGT 125 (261)
T ss_dssp CTTS-C-----CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSC
T ss_pred chhh-C-----CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcE
Confidence 9654 2 2235689999999999999876533 366667 663
No 137
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=4.2e-13 Score=96.07 Aligned_cols=82 Identities=21% Similarity=0.208 Sum_probs=66.2
Q ss_pred hcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHH
Q psy5757 23 IQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETV 101 (139)
Q Consensus 23 l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~ 101 (139)
+..+++++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++.. ++ ..+++++++|..+.+.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~I~v~~gD~l~~~~-- 86 (244)
T 3gnl_A 15 VASYITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGL-----TEQIDVRKGNGLAVIE-- 86 (244)
T ss_dssp HHTTCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCC--
T ss_pred HHHhCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEecchhhccC--
Confidence 34456888999999999999999999986 455899999999999999999988 65 3579999999766332
Q ss_pred hhhccCCceeEEecC
Q psy5757 102 ELMMKFDRYDFLPHA 116 (139)
Q Consensus 102 ~~~~~~~~~D~vi~~ 116 (139)
+.++||+|+..
T Consensus 87 ----~~~~~D~Ivia 97 (244)
T 3gnl_A 87 ----KKDAIDTIVIA 97 (244)
T ss_dssp ----GGGCCCEEEEE
T ss_pred ----ccccccEEEEe
Confidence 12359988754
No 138
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.44 E-value=6.8e-13 Score=96.47 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=77.7
Q ss_pred hhcc-cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT 83 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~ 83 (139)
.+|+ ++..+.++.++++.+. ..++ +|||+|||+|.++..+++... +|+++|+|+.+++.+++++..
T Consensus 24 ~~GQnfL~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~------- 90 (271)
T 3fut_A 24 RFGQNFLVSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSG------- 90 (271)
T ss_dssp TSSCCEECCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTT-------
T ss_pred cCCccccCCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCC-------
Confidence 4677 4457778888888886 5777 999999999999999999874 999999999999999988754
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCcccc
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
.+++++++|+.+ +. .. ....+|.|++|++++
T Consensus 91 -~~v~vi~~D~l~-~~---~~-~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 91 -LPVRLVFQDALL-YP---WE-EVPQGSLLVANLPYH 121 (271)
T ss_dssp -SSEEEEESCGGG-SC---GG-GSCTTEEEEEEECSS
T ss_pred -CCEEEEECChhh-CC---hh-hccCccEEEecCccc
Confidence 689999999765 21 11 112579999999854
No 139
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.44 E-value=8.7e-13 Score=91.12 Aligned_cols=97 Identities=19% Similarity=0.200 Sum_probs=69.2
Q ss_pred cccccChHHHHHHHHHhccc-CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCC
Q psy5757 7 GAAIGGISAILTYLSIIQPH-LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG 85 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~l~~~-~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~ 85 (139)
++..........+...+... ..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.|++++ .
T Consensus 28 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~----------~ 95 (200)
T 1ne2_A 28 EQYPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNC----------G 95 (200)
T ss_dssp --CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHC----------T
T ss_pred eecCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhc----------C
Confidence 34445555555666555321 3467899999999999999999873 237999999999999998875 3
Q ss_pred cEEEEEccchhhhHHHhhhccCCceeEEecCcccccccc
Q psy5757 86 HIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 86 ~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~ 124 (139)
+++++++|+.+ + .++||+|++++++|+..+
T Consensus 96 ~~~~~~~d~~~-~--------~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 96 GVNFMVADVSE-I--------SGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp TSEEEECCGGG-C--------CCCEEEEEECCCC-----
T ss_pred CCEEEECcHHH-C--------CCCeeEEEECCCchhccC
Confidence 67899999654 1 157999999999998864
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=8.3e-13 Score=91.73 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=70.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+.+++.. ..++.+|||+|||+|.++..++.... .+|+++|+|+.+++.|++++.. +. ..++++++.+|+
T Consensus 41 ~~~l~~~l~~-~~~~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~v~~~~~d~ 113 (201)
T 2ift_A 41 KETLFNWLMP-YIHQSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKC----SSEQAEVINQSS 113 (201)
T ss_dssp HHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTC----CTTTEEEECSCH
T ss_pred HHHHHHHHHH-hcCCCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCC----CccceEEEECCH
Confidence 3445555542 12678999999999999998777653 3899999999999999999987 32 015899999996
Q ss_pred hhhhHHHhhhccCCc-eeEEecCcccc
Q psy5757 95 IKRIETVELMMKFDR-YDFLPHAPAES 120 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~-~D~vi~~~~~~ 120 (139)
.+... ....++ ||+|+++++++
T Consensus 114 ~~~~~----~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 114 LDFLK----QPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp HHHTT----SCCSSCCEEEEEECCCSS
T ss_pred HHHHH----hhccCCCCCEEEECCCCC
Confidence 55221 112467 99999999976
No 141
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.43 E-value=2.7e-13 Score=95.56 Aligned_cols=103 Identities=11% Similarity=0.180 Sum_probs=76.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+.+.+.....++.+|||+|||+|..+..+++... +++++|+++.+++.++++. ++++++++|+.
T Consensus 27 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~ 93 (239)
T 3bxo_A 27 ASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL----------PDATLHQGDMR 93 (239)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC----------TTCEEEECCTT
T ss_pred HHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC----------CCCEEEECCHH
Confidence 3345555554456788999999999999999999985 8999999999999998863 56888999965
Q ss_pred hhhHHHhhhccCCceeEEe-cCccccccccc------eeeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLP-HAPAESWMNIP------VCINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi-~~~~~~~~~~p------~~~~~~~~~p~g~ 138 (139)
+ +. ..++||+|+ +..++||+.++ ....++.++|+|.
T Consensus 94 ~-~~------~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 136 (239)
T 3bxo_A 94 D-FR------LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGV 136 (239)
T ss_dssp T-CC------CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEE
T ss_pred H-cc------cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeE
Confidence 4 11 145799999 45588988543 2233556666663
No 142
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.43 E-value=1.6e-13 Score=96.97 Aligned_cols=104 Identities=13% Similarity=0.283 Sum_probs=77.1
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
...+.+...++++.+|||+|||+|..+..+++. . +++++|+++.+++.|+++..... .+++++++|+.+
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~- 90 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMRE- 90 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGGG-
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChhh-
Confidence 344455545677899999999999999999887 3 99999999999999999887611 478899999654
Q ss_pred hHHHhhhccCCceeEEecCc-cccccccc------eeeeeeeccCCCC
Q psy5757 98 IETVELMMKFDRYDFLPHAP-AESWMNIP------VCINYTATMPEGS 138 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~-~~~~~~~p------~~~~~~~~~p~g~ 138 (139)
+ .. .++||+|+++. ++||+.++ ....++.++|+|.
T Consensus 91 ~-----~~-~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 132 (243)
T 3d2l_A 91 L-----EL-PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGK 132 (243)
T ss_dssp C-----CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEE
T ss_pred c-----CC-CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeE
Confidence 1 11 26799999987 88888432 1223555666663
No 143
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.43 E-value=2e-13 Score=96.03 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|.++..+++..++.++++++|+++.+++.++++++. ..+++++++|+.+... + ...
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-------~~~v~~~~~d~~~~~~-~--~~~ 140 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-------RRNIVPILGDATKPEE-Y--RAL 140 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-------CTTEEEEECCTTCGGG-G--TTT
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-------cCCCEEEEccCCCcch-h--hcc
Confidence 45788999999999999999999875556999999999999999888765 2689999999765211 1 111
Q ss_pred CCceeEEecCccccccccc-eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIP-VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p-~~~~~~~~~p~g~ 138 (139)
.++||+|+++.+..+.... ....++.++|+|.
T Consensus 141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~ 173 (227)
T 1g8a_A 141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGY 173 (227)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEE
T ss_pred cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCE
Confidence 3479999998763222111 3333555666653
No 144
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.43 E-value=3.8e-13 Score=109.66 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=83.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
+..+.+.+. ..++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++.. ......+..+++++++|+
T Consensus 710 le~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 710 VEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 334444443 24788999999999999999999885456999999999999999987653 110001236899999997
Q ss_pred hhhhHHHhhhccCCceeEEecCcccccccccee-----eeeeeccCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMNIPVC-----INYTATMPE 136 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~-----~~~~~~~p~ 136 (139)
.+ + ....++||+|++..++||+.++.. ..++.++|+
T Consensus 788 ~d-L-----p~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 788 LE-F-----DSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp TS-C-----CTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred Hh-C-----CcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 65 2 123568999999999999998653 235666664
No 145
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.43 E-value=7.9e-14 Score=96.99 Aligned_cols=92 Identities=18% Similarity=0.246 Sum_probs=71.1
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.+.++.+|||+|||+|.++..+++... +++++|+++.+++.++++. +++++.+|+.+ + .
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~----~--~- 98 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRL-----------GRPVRTMLFHQ----L--D- 98 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH-----------TSCCEECCGGG----C--C-
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhc-----------CCceEEeeecc----C--C-
Confidence 467788999999999999999998843 9999999999999998875 24466777543 2 1
Q ss_pred cCCceeEEecCccccccc--cc---eeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMN--IP---VCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~--~p---~~~~~~~~~p~g~ 138 (139)
..++||+|+++.++|++. ++ ....++.++|+|.
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 136 (211)
T 3e23_A 99 AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGL 136 (211)
T ss_dssp CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcE
Confidence 357899999999999987 32 2333566666663
No 146
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.43 E-value=2e-12 Score=94.42 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=76.3
Q ss_pred hhcc-cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHhhccccc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNS-TGQVIGIEHVPQLVNSSIQNILHSNARLL 82 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~-~~~v~~~d~~~~~~~~a~~~~~~~~~~~~ 82 (139)
.+|+ ++..+.+..++++.+. ..++.+|||+|||+|.++..+++.... .++|+++|+|+.+++.++++. .
T Consensus 19 ~~GQ~fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~------ 89 (279)
T 3uzu_A 19 RFGQNFLVDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G------ 89 (279)
T ss_dssp CCSCCEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G------
T ss_pred cCCccccCCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C------
Confidence 4677 4557777888888886 578889999999999999999998852 244999999999999999884 3
Q ss_pred cCCcEEEEEccchhh-hHHHhhhccCCceeEEecCcc
Q psy5757 83 TDGHIKFVALGMIKR-IETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 83 ~~~~i~~~~~d~~~~-~~~~~~~~~~~~~D~vi~~~~ 118 (139)
.+++++++|+.+. ++.+... .....+.|++|++
T Consensus 90 --~~v~~i~~D~~~~~~~~~~~~-~~~~~~~vv~NlP 123 (279)
T 3uzu_A 90 --ELLELHAGDALTFDFGSIARP-GDEPSLRIIGNLP 123 (279)
T ss_dssp --GGEEEEESCGGGCCGGGGSCS-SSSCCEEEEEECC
T ss_pred --CCcEEEECChhcCChhHhccc-ccCCceEEEEccC
Confidence 6899999997762 1211000 0003467888887
No 147
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=5.1e-13 Score=96.99 Aligned_cols=80 Identities=21% Similarity=0.147 Sum_probs=68.2
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.+.++.+|||+|||+|.++..+++..+ .++|+++|+++.+++.|+++++. ++ .+++++.+|+.+. +
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~~~d~~~~-~----- 182 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKL------NNVIPILADNRDV-E----- 182 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTC------SSEEEEESCGGGC-C-----
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEECChHHc-C-----
Confidence 367889999999999999999999874 56999999999999999999988 54 6889999997652 2
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
..++||+|+++++.
T Consensus 183 -~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 183 -LKDVADRVIMGYVH 196 (272)
T ss_dssp -CTTCEEEEEECCCS
T ss_pred -ccCCceEEEECCcc
Confidence 13579999999985
No 148
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.42 E-value=1.9e-13 Score=97.34 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=72.8
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||||||+|.++..+++.. +...++|+|+++.+++.|++++.. .........|+.++++|+.+.++. ..+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~---~~~ 120 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPN---FFY 120 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHH---HCC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhh---hCC
Confidence 566789999999999999999987 467999999999999999887653 100001136899999997653332 123
Q ss_pred CCceeEEecCccccccc-----------cceeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMN-----------IPVCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~-----------~p~~~~~~~~~p~g~ 138 (139)
.++||.|+++.+-.|.. .......+.++|+|.
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~ 163 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGL 163 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEE
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCE
Confidence 56899998876655532 122334566667664
No 149
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=2e-13 Score=99.22 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=75.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++.. +. ..+++++++|+.+. + ..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~---~~- 129 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKR-----RFKVFFRAQDSYGR-H---MD- 129 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCC-----SSEEEEEESCTTTS-C---CC-
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCC-----CccEEEEECCcccc-c---cC-
Confidence 4788999999999999999988864 34899999999999999999877 33 25789999996541 1 10
Q ss_pred cCCceeEEecCcccccc----ccc---eeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWM----NIP---VCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~----~~p---~~~~~~~~~p~g~ 138 (139)
+.++||+|+++.++|+. .++ ....++.++|+|.
T Consensus 130 ~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~ 169 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGY 169 (298)
T ss_dssp CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 35689999999999883 222 2333566667663
No 150
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.42 E-value=1.5e-13 Score=95.48 Aligned_cols=98 Identities=14% Similarity=0.201 Sum_probs=72.7
Q ss_pred HHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhH
Q psy5757 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIE 99 (139)
Q Consensus 20 ~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 99 (139)
...+.....++.+|||+|||+|..+..+ .. .+++++|+++.+++.++++. .+++++++|+.+ +
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l--~~---~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~-~- 89 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL--PY---PQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEA-L- 89 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC--CC---SEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTS-C-
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC--CC---CeEEEEeCCHHHHHHHHHhC----------CCcEEEEccccc-C-
Confidence 3444433457889999999999998877 11 28999999999999998874 467788888544 1
Q ss_pred HHhhhccCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 100 TVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 100 ~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+.+.++||+|+++.++|++.++... ..+.++|+|.
T Consensus 90 ----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 127 (211)
T 2gs9_A 90 ----PFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGA 127 (211)
T ss_dssp ----CSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEE
T ss_pred ----CCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCE
Confidence 2235689999999999999876432 2566666663
No 151
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.42 E-value=3.6e-13 Score=95.26 Aligned_cols=102 Identities=18% Similarity=0.095 Sum_probs=72.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|.++..+++..++.++++++|+++.+++.+.++.+. ..+++++.+|+.+.. .+ +..
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-------~~~v~~~~~d~~~~~-~~--~~~ 144 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-------RTNIIPVIEDARHPH-KY--RML 144 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-------CTTEEEECSCTTCGG-GG--GGG
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-------cCCeEEEEcccCChh-hh--ccc
Confidence 46788999999999999999999975556999999999988888777765 268999999976521 11 123
Q ss_pred CCceeEEecCccccccccc-eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIP-VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p-~~~~~~~~~p~g~ 138 (139)
.++||+|+++.+..+.... ....++.++|+|.
T Consensus 145 ~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~ 177 (233)
T 2ipx_A 145 IAMVDVIFADVAQPDQTRIVALNAHTFLRNGGH 177 (233)
T ss_dssp CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEE
T ss_pred CCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeE
Confidence 4679999998762111110 2223556666653
No 152
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.41 E-value=1.3e-12 Score=97.49 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=78.3
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCC-cEEEEEccch
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDG-HIKFVALGMI 95 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~-~i~~~~~d~~ 95 (139)
.+.+.+.. ..++.+|||+|||+|.++..+++... +|+++|+|+.+++.|++++.. ++ .. +++++++|+.
T Consensus 143 ~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl-----~~~~v~~i~~D~~ 213 (332)
T 2igt_A 143 WLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGL-----EQAPIRWICEDAM 213 (332)
T ss_dssp HHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTC-----TTSCEEEECSCHH
T ss_pred HHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECcHH
Confidence 34444431 34678999999999999999999653 999999999999999999987 54 12 5999999987
Q ss_pred hhhHHHhhhccCCceeEEecCccc-cc---------cccc---eeeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAE-SW---------MNIP---VCINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~-~~---------~~~p---~~~~~~~~~p~g~ 138 (139)
+....... ..++||+|+++++. .. ..+. .....+.++|+|.
T Consensus 214 ~~l~~~~~--~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~ 267 (332)
T 2igt_A 214 KFIQREER--RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKAL 267 (332)
T ss_dssp HHHHHHHH--HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCC
T ss_pred HHHHHHHh--cCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcE
Confidence 64332211 14579999999873 21 1111 2223567788885
No 153
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.41 E-value=3e-13 Score=93.71 Aligned_cols=107 Identities=13% Similarity=0.046 Sum_probs=75.4
Q ss_pred HHHHHHHhccc-CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEcc
Q psy5757 16 ILTYLSIIQPH-LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALG 93 (139)
Q Consensus 16 ~~~~~~~l~~~-~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d 93 (139)
...+.+.+... ..++.+|||+|||+|..+..++... +..+++++|+++.+++.+++++.. +. .+++++++|
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d 123 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL------ENIEPVQSR 123 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC------SSEEEEECC
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEecc
Confidence 34445544311 1247899999999999999999987 456999999999999999999887 44 569999999
Q ss_pred chhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCC
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEG 137 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g 137 (139)
+.+. . +.++||+|+++.. +..........+.++|+|
T Consensus 124 ~~~~-~------~~~~~D~i~~~~~-~~~~~~l~~~~~~L~~gG 159 (207)
T 1jsx_A 124 VEEF-P------SEPPFDGVISRAF-ASLNDMVSWCHHLPGEQG 159 (207)
T ss_dssp TTTS-C------CCSCEEEEECSCS-SSHHHHHHHHTTSEEEEE
T ss_pred hhhC-C------ccCCcCEEEEecc-CCHHHHHHHHHHhcCCCc
Confidence 6541 1 2467999998764 222222333344455554
No 154
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.40 E-value=2.5e-12 Score=97.25 Aligned_cols=93 Identities=19% Similarity=0.191 Sum_probs=73.4
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEcc
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALG 93 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d 93 (139)
....++... ..++.+|||+|||+|.++..++... +.++++|+|+|+.+++.|++++.. ++ .++++++++|
T Consensus 206 la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl-----~~~i~~~~~D 276 (373)
T 3tm4_A 206 IANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGV-----LDKIKFIQGD 276 (373)
T ss_dssp HHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTC-----GGGCEEEECC
T ss_pred HHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECC
Confidence 344444444 4778899999999999999999986 355899999999999999999988 54 3689999999
Q ss_pred chhhhHHHhhhccCCceeEEecCcccccc
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
+.+ ++ .+.++||+|++|++++..
T Consensus 277 ~~~-~~-----~~~~~fD~Ii~npPyg~r 299 (373)
T 3tm4_A 277 ATQ-LS-----QYVDSVDFAISNLPYGLK 299 (373)
T ss_dssp GGG-GG-----GTCSCEEEEEEECCCC--
T ss_pred hhh-CC-----cccCCcCEEEECCCCCcc
Confidence 765 22 234689999999997653
No 155
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.40 E-value=9.9e-13 Score=95.11 Aligned_cols=94 Identities=18% Similarity=0.159 Sum_probs=72.5
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc--CCcEEEE
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT--DGHIKFV 90 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~--~~~i~~~ 90 (139)
+.....++..+. +.++.+|||+|||+|.++..+++...+.++++++|+++.+++.|++++.... + ..+++++
T Consensus 85 ~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----g~~~~~v~~~ 158 (280)
T 1i9g_A 85 PKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCY----GQPPDNWRLV 158 (280)
T ss_dssp HHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHH----TSCCTTEEEE
T ss_pred HHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc----CCCCCcEEEE
Confidence 444556666664 6788899999999999999999986556799999999999999999986520 1 2689999
Q ss_pred EccchhhhHHHhhhccCCceeEEecCcc
Q psy5757 91 ALGMIKRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 91 ~~d~~~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
++|+.+. ..+.++||+|+++..
T Consensus 159 ~~d~~~~------~~~~~~~D~v~~~~~ 180 (280)
T 1i9g_A 159 VSDLADS------ELPDGSVDRAVLDML 180 (280)
T ss_dssp CSCGGGC------CCCTTCEEEEEEESS
T ss_pred ECchHhc------CCCCCceeEEEECCc
Confidence 9996542 122457999999764
No 156
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.40 E-value=8.8e-13 Score=95.60 Aligned_cols=88 Identities=14% Similarity=0.228 Sum_probs=70.1
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccch
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~ 95 (139)
..++..+. +.++.+|||+|||+|.++..+++...+.++++++|+++.+++.|++++.. +. .++++++.+|+.
T Consensus 102 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~ 174 (277)
T 1o54_A 102 SFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----IERVTIKVRDIS 174 (277)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----GGGEEEECCCGG
T ss_pred HHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHH
Confidence 34444443 56788999999999999999999965567999999999999999999877 43 257999999965
Q ss_pred hhhHHHhhhccCCceeEEecCcc
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
+. .+.++||+|+++++
T Consensus 175 ~~-------~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 175 EG-------FDEKDVDALFLDVP 190 (277)
T ss_dssp GC-------CSCCSEEEEEECCS
T ss_pred Hc-------ccCCccCEEEECCc
Confidence 52 12357999999875
No 157
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.39 E-value=3.9e-13 Score=96.04 Aligned_cols=117 Identities=13% Similarity=0.053 Sum_probs=77.0
Q ss_pred HHHHHhcccC--CCCCeEEEEcccCChhHHHHHHH--cCCCceEEEEeCCHHHHHHHHHHHHhhccccccCC-c------
Q psy5757 18 TYLSIIQPHL--NENSKVLEIGSGSGYLTNMISEL--MNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG-H------ 86 (139)
Q Consensus 18 ~~~~~l~~~~--~~~~~iLdiG~G~G~~~~~l~~~--~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~-~------ 86 (139)
.+++.+...+ .++.+|||+|||+|.++..+++. . +..+++|+|+|+.+++.|++++..... .... +
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~--~~~~~~~~~~~~ 114 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSP--AGLTARELERRE 114 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSH--HHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhh--ccccccchhhhh
Confidence 4444443322 25679999999999999999988 3 245899999999999999988765100 0001 1
Q ss_pred -------------------EE-------------EEEccchhhhHHHhhhccCCceeEEecCccccccccc---------
Q psy5757 87 -------------------IK-------------FVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIP--------- 125 (139)
Q Consensus 87 -------------------i~-------------~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p--------- 125 (139)
++ ++++|+.+....... ....+||+|++|++++...+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~ 193 (250)
T 1o9g_A 115 QSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAV-LAGSAPDVVLTDLPYGERTHWEGQVPGQPV 193 (250)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHH-HTTCCCSEEEEECCGGGSSSSSSCCCHHHH
T ss_pred hhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccc-cCCCCceEEEeCCCeeccccccccccccHH
Confidence 55 888997653211000 023479999999987765432
Q ss_pred ---eeeeeeeccCCCC
Q psy5757 126 ---VCINYTATMPEGS 138 (139)
Q Consensus 126 ---~~~~~~~~~p~g~ 138 (139)
....++.++|+|.
T Consensus 194 ~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 194 AGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHSCTTCE
T ss_pred HHHHHHHHHhcCCCcE
Confidence 2334677888874
No 158
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.39 E-value=3.3e-12 Score=91.39 Aligned_cols=99 Identities=20% Similarity=0.269 Sum_probs=72.7
Q ss_pred hhcccc-cChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc
Q psy5757 5 KIGAAI-GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT 83 (139)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~ 83 (139)
.+|+.+ ..+.....+.+.+. ..++.+|||+|||+|.++..+++... +++++|+|+.+++.+++++..
T Consensus 7 ~~gQ~fl~d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~------- 74 (244)
T 1qam_A 7 KHSQNFITSKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRCN---FVTAIEIDHKLCKTTENKLVD------- 74 (244)
T ss_dssp ---CCBCCCHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHTTT-------
T ss_pred cCCccccCCHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcCC---eEEEEECCHHHHHHHHHhhcc-------
Confidence 456643 45666677776664 46788999999999999999999874 999999999999999988754
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCccccc
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
.++++++++|+.+ +. .. ....+ .|++|+++++
T Consensus 75 ~~~v~~~~~D~~~-~~---~~-~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 75 HDNFQVLNKDILQ-FK---FP-KNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CCSEEEECCCGGG-CC---CC-SSCCC-EEEEECCGGG
T ss_pred CCCeEEEEChHHh-CC---cc-cCCCe-EEEEeCCccc
Confidence 3689999999655 11 11 11235 6888887653
No 159
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.38 E-value=1.3e-12 Score=99.12 Aligned_cols=83 Identities=11% Similarity=0.063 Sum_probs=67.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCC-cEEEEEccchhhhHHHhhhc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDG-HIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~-~i~~~~~d~~~~~~~~~~~~ 105 (139)
.++++|||+|||+|.++..++.... .+|+++|+|+.+++.|++++.. ++ .. +++++++|+.+.++.+..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~-- 281 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARR-- 281 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHH--
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHH--
Confidence 6778999999999999999998642 2899999999999999999988 54 23 899999998775443321
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
...+||+|+++|+.
T Consensus 282 ~~~~fD~Ii~DPP~ 295 (385)
T 2b78_A 282 HHLTYDIIIIDPPS 295 (385)
T ss_dssp TTCCEEEEEECCCC
T ss_pred hCCCccEEEECCCC
Confidence 23579999999885
No 160
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.38 E-value=2.1e-12 Score=92.10 Aligned_cols=91 Identities=20% Similarity=0.252 Sum_probs=70.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...++..+. +.++.+|||+|||+|.++..+++...+.++++++|+++.+++.|++++.... +.+++++..+|+.
T Consensus 85 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----g~~~v~~~~~d~~ 158 (258)
T 2pwy_A 85 ASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW----QVENVRFHLGKLE 158 (258)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC----CCCCEEEEESCGG
T ss_pred HHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc----CCCCEEEEECchh
Confidence 345555553 5788999999999999999999996556699999999999999999987620 1368999999965
Q ss_pred hhhHHHhhhccCCceeEEecCcc
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
+. ..+.++||+|+++..
T Consensus 159 ~~------~~~~~~~D~v~~~~~ 175 (258)
T 2pwy_A 159 EA------ELEEAAYDGVALDLM 175 (258)
T ss_dssp GC------CCCTTCEEEEEEESS
T ss_pred hc------CCCCCCcCEEEECCc
Confidence 52 123457999998654
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.38 E-value=9.8e-13 Score=98.35 Aligned_cols=98 Identities=13% Similarity=0.237 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|.++..+++.. ..+++++|+++ +++.|+++++. ++ .++++++.+|+.+ + ..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~-----~~~i~~~~~d~~~-~-----~~ 127 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKL-----EDTITLIKGKIEE-V-----HL 127 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTC-----TTTEEEEESCTTT-S-----CC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCC-----CCcEEEEEeeHHH-h-----cC
Confidence 4678899999999999999999974 24899999996 99999999877 44 3689999999654 1 22
Q ss_pred cCCceeEEecCcc---ccccccce---eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPA---ESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~---~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+.++||+|++++. +++...+. ....+.++|+|.
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 166 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGS 166 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcE
Confidence 3468999999883 33322221 222456666663
No 162
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=4.4e-13 Score=91.37 Aligned_cols=92 Identities=17% Similarity=0.279 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
++++.+|||+|||+|..+..+++... +++++|+++.+++.++++. .+++++++|+.+ + ..+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~----------~~~~~~~~d~~~-~-----~~~ 104 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDF----------PEARWVVGDLSV-D-----QIS 104 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHC----------TTSEEEECCTTT-S-----CCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhC----------CCCcEEEccccc-C-----CCC
Confidence 57888999999999999999999843 9999999999999998874 457888898654 1 123
Q ss_pred CCceeEEecC-ccccccccc-----eeeeeeeccCCC
Q psy5757 107 FDRYDFLPHA-PAESWMNIP-----VCINYTATMPEG 137 (139)
Q Consensus 107 ~~~~D~vi~~-~~~~~~~~p-----~~~~~~~~~p~g 137 (139)
.++||+|+++ ..+|++..+ .....+.++|+|
T Consensus 105 ~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G 141 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADG 141 (195)
T ss_dssp CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCC
Confidence 4679999998 678877432 222244555555
No 163
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.38 E-value=1.2e-13 Score=96.63 Aligned_cols=113 Identities=8% Similarity=0.017 Sum_probs=73.7
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccch
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~ 95 (139)
....+.+. ..++.+|||+|||+|.++..+++.. +.++++++|+++.+++.+.+.... ... ...++++++++|+.
T Consensus 17 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~--~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 17 DAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAK--GGLPNLLYLWATAE 91 (218)
T ss_dssp HHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGG--TCCTTEEEEECCST
T ss_pred HHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhh--cCCCceEEEecchh
Confidence 34445553 5778899999999999999999986 467999999999988864433322 000 11368999999966
Q ss_pred hhhHHHhhhccCCceeEEecCcccc--ccccce---eeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPAES--WMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~~~--~~~~p~---~~~~~~~~p~g~ 138 (139)
+ ++ .....+.++++++....+ ++.++. ...++.++|+|.
T Consensus 92 ~-l~---~~~~~d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 135 (218)
T 3mq2_A 92 R-LP---PLSGVGELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGAS 135 (218)
T ss_dssp T-CC---SCCCEEEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEE
T ss_pred h-CC---CCCCCCEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcE
Confidence 5 22 111114466555555553 665553 333667777764
No 164
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=5.8e-13 Score=95.08 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=64.9
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhh-cccc--ccCCcEEEEEccchhhhHHHhhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHS-NARL--LTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~-~~~~--~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.+++++... .... .+..|++++.+|+.+.+.. .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~---~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPN---F 123 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGG---T
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHH---h
Confidence 467899999999999999999988 4668999999999999999987651 0000 0236899999997653332 1
Q ss_pred ccCCceeEEecCcc
Q psy5757 105 MKFDRYDFLPHAPA 118 (139)
Q Consensus 105 ~~~~~~D~vi~~~~ 118 (139)
.+.+++|.|+.+.+
T Consensus 124 ~~~~~~d~v~~~~p 137 (246)
T 2vdv_E 124 FEKGQLSKMFFCFP 137 (246)
T ss_dssp SCTTCEEEEEEESC
T ss_pred ccccccCEEEEECC
Confidence 23467898876544
No 165
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.38 E-value=1e-12 Score=95.57 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=73.1
Q ss_pred CCCeEEEEcccC--ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 29 ENSKVLEIGSGS--GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 29 ~~~~iLdiG~G~--G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
...++||+|||+ +..+..++.+..|.++|+++|.|+.|+..|+.++... ...+++++++|+.+.-..+.....
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~-----~~~~~~~v~aD~~~~~~~l~~~~~ 152 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST-----PEGRTAYVEADMLDPASILDAPEL 152 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC-----SSSEEEEEECCTTCHHHHHTCHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC-----CCCcEEEEEecccChhhhhccccc
Confidence 346899999997 5566666666557889999999999999999987651 125799999998762111110100
Q ss_pred CCcee-----EEecCccccccccce------eeeeeeccCCCC
Q psy5757 107 FDRYD-----FLPHAPAESWMNIPV------CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D-----~vi~~~~~~~~~~p~------~~~~~~~~p~g~ 138 (139)
...|| .|+++.++||+.+.. ...+..++|+|.
T Consensus 153 ~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~ 195 (277)
T 3giw_A 153 RDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSY 195 (277)
T ss_dssp HTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCE
T ss_pred ccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcE
Confidence 12243 688999999999853 233666777774
No 166
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.37 E-value=7.4e-13 Score=99.53 Aligned_cols=96 Identities=13% Similarity=0.024 Sum_probs=76.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.|++++.. ++ .++++++.+|+.+.+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~------- 245 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGL-----ADRVTVAEGDFFKPL------- 245 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCC-------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCCcC-------
Confidence 3567899999999999999999998 4679999999 9999999999877 54 358999999965411
Q ss_pred cCCceeEEecCccccccccce-----eeeeeeccCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPV-----CINYTATMPEG 137 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g 137 (139)
+ ..||+|+++.++|++.++. ...++.++|+|
T Consensus 246 ~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG 281 (374)
T 1qzz_A 246 P-VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGG 281 (374)
T ss_dssp S-CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred C-CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCc
Confidence 1 2399999999999888763 22355666666
No 167
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.37 E-value=1.7e-12 Score=97.90 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.|++++.. ++ .++++++.+|+.+ ..
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l-----~~~v~~~~~d~~~-------~~ 265 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGL-----ADRCEILPGDFFE-------TI 265 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTT-------CC
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCc-----CCceEEeccCCCC-------CC
Confidence 3567899999999999999999997 5679999999 9999999999877 54 3689999999653 11
Q ss_pred cCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
+. .||+|++..++|++.++. ...++.++|+|.
T Consensus 266 p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~ 302 (369)
T 3gwz_A 266 PD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSR 302 (369)
T ss_dssp CS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCE
T ss_pred CC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCE
Confidence 22 799999999999998774 334777888874
No 168
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.37 E-value=2.3e-13 Score=101.74 Aligned_cols=105 Identities=15% Similarity=0.120 Sum_probs=77.9
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+++.+. ..++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.+++++.. +. +.+++.+|+
T Consensus 185 ~~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~-------~~~~~~~d~ 254 (343)
T 2pjd_A 185 SQLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGV-------EGEVFASNV 254 (343)
T ss_dssp HHHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTC-------CCEEEECST
T ss_pred HHHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC-------CCEEEEccc
Confidence 344555553 2356799999999999999999987 456999999999999999999877 33 356788886
Q ss_pred hhhhHHHhhhccCCceeEEecCccccccc--------cceeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPAESWMN--------IPVCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~~~~~~--------~p~~~~~~~~~p~g~ 138 (139)
.+. ..++||+|++++++|+-. ......++.++|+|.
T Consensus 255 ~~~--------~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~ 298 (343)
T 2pjd_A 255 FSE--------VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGE 298 (343)
T ss_dssp TTT--------CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred ccc--------ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcE
Confidence 431 246799999999999621 123344667777764
No 169
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.37 E-value=9.4e-13 Score=93.05 Aligned_cols=79 Identities=18% Similarity=0.302 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.+++++.. ..++.++.+|+.+..... ...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~~~--~~~ 141 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE-------RENIIPILGDANKPQEYA--NIV 141 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT-------CTTEEEEECCTTCGGGGT--TTS
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc-------CCCeEEEECCCCCccccc--ccC
Confidence 45788999999999999999999974 55999999999999999988765 368999999976511101 112
Q ss_pred CCceeEEecC
Q psy5757 107 FDRYDFLPHA 116 (139)
Q Consensus 107 ~~~~D~vi~~ 116 (139)
++||+|++.
T Consensus 142 -~~~D~v~~~ 150 (230)
T 1fbn_A 142 -EKVDVIYED 150 (230)
T ss_dssp -CCEEEEEEC
T ss_pred -ccEEEEEEe
Confidence 579999943
No 170
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.37 E-value=1.7e-13 Score=99.85 Aligned_cols=109 Identities=10% Similarity=-0.057 Sum_probs=68.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcc-cc---------c-c------------
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNA-RL---------L-T------------ 83 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~-~~---------~-~------------ 83 (139)
.++.+|||+|||+|..+..++.... .+|+|+|+|+.+++.|++++.. ... .| + +
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 3678999999999995544444332 3999999999999999886542 000 00 0 0
Q ss_pred -CCcEEEEEccchhhhHHHhhhccCCceeEEecCccccc----cccc---eeeeeeeccCCCC
Q psy5757 84 -DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW----MNIP---VCINYTATMPEGS 138 (139)
Q Consensus 84 -~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~----~~~p---~~~~~~~~~p~g~ 138 (139)
...++++..|+.+..+.-....+.++||+|+++.++|| +.++ ....++.++|+|.
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~ 210 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGH 210 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 01145666775541110000122356999999999999 4443 3344788888875
No 171
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.36 E-value=8e-13 Score=98.08 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=78.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.|++++.. ++ .++++++.+|+.+. .+.
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-------~p~ 234 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGL-----SGRAQVVVGSFFDP-------LPA 234 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTSC-------CCC
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCc-----CcCeEEecCCCCCC-------CCC
Confidence 46799999999999999999988 4679999999 9999999999877 54 36899999996531 122
Q ss_pred CceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
.||+|++..++|++.++ ....++.++|+|.
T Consensus 235 -~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 269 (332)
T 3i53_A 235 -GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGV 269 (332)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCE
T ss_pred -CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999886 2334778888885
No 172
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.36 E-value=8.3e-13 Score=99.37 Aligned_cols=99 Identities=11% Similarity=0.091 Sum_probs=79.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.|++++.. +. .++++++.+|+.+.- .+.+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~----~~~p 246 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSG-----SERIHGHGANLLDRD----VPFP 246 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTT-----GGGEEEEECCCCSSS----CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCc-----ccceEEEEccccccC----CCCC
Confidence 456799999999999999999998 4679999999 9999999999876 43 368999999965410 0112
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
+.||+|++..++|++.++. ...++.++|+|.
T Consensus 247 -~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 282 (363)
T 3dp7_A 247 -TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSK 282 (363)
T ss_dssp -CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCE
T ss_pred -CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 5799999999999888763 334778888885
No 173
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.36 E-value=1.9e-12 Score=97.06 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=73.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++++|||+|||+|.++..+++.. ..+|+|+|++ ++++.|+++... ++ ..+++++++|+.+ + +.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~-~-----~~ 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANKL-----DHVVTIIKGKVEE-V-----EL 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTTC-----TTTEEEEESCTTT-C-----CC
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcCC-----CCcEEEEECcHHH-c-----cC
Confidence 3578899999999999999999983 3499999999 599999999887 55 3569999999655 1 23
Q ss_pred cCCceeEEecCcccccc---ccce---eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWM---NIPV---CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~---~~p~---~~~~~~~~p~g~ 138 (139)
+.++||+|++++..+++ ..+. ....+.++|+|.
T Consensus 130 ~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~ 168 (349)
T 3q7e_A 130 PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGL 168 (349)
T ss_dssp SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEE
T ss_pred CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCE
Confidence 35789999998865544 2222 222566777764
No 174
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.36 E-value=2.7e-13 Score=96.56 Aligned_cols=111 Identities=14% Similarity=0.006 Sum_probs=75.0
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHH---cCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEE
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISEL---MNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKF 89 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~---~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~ 89 (139)
+.....+...+. ..++.+|||+|||+|+.+..+++. ..+.++|+++|+++.+++.|+. . ..++++
T Consensus 67 p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~-------~~~v~~ 134 (236)
T 2bm8_A 67 PDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D-------MENITL 134 (236)
T ss_dssp HHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G-------CTTEEE
T ss_pred HHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c-------CCceEE
Confidence 655555555554 235679999999999999999998 3456799999999999887761 1 268999
Q ss_pred EEccchhhhHHHhhhccCCceeEEecCccccc-cccceeeeee-eccCCCC
Q psy5757 90 VALGMIKRIETVELMMKFDRYDFLPHAPAESW-MNIPVCINYT-ATMPEGS 138 (139)
Q Consensus 90 ~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~-~~~p~~~~~~-~~~p~g~ 138 (139)
+++|+.+. ..+.. ....+||+|+++.. |- ........++ .++|+|.
T Consensus 135 ~~gD~~~~-~~l~~-~~~~~fD~I~~d~~-~~~~~~~l~~~~r~~LkpGG~ 182 (236)
T 2bm8_A 135 HQGDCSDL-TTFEH-LREMAHPLIFIDNA-HANTFNIMKWAVDHLLEEGDY 182 (236)
T ss_dssp EECCSSCS-GGGGG-GSSSCSSEEEEESS-CSSHHHHHHHHHHHTCCTTCE
T ss_pred EECcchhH-HHHHh-hccCCCCEEEECCc-hHhHHHHHHHHHHhhCCCCCE
Confidence 99997663 10111 11236999998766 32 1111222244 7888885
No 175
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=9.3e-13 Score=97.59 Aligned_cols=81 Identities=10% Similarity=0.045 Sum_probs=65.4
Q ss_pred CeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCce
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDRY 110 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 110 (139)
.+|||||||+|.++..+++.. +..+++++|+++.+++.|++++... ..++++++++|+.+.+. ..+.++|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~-----~~~rv~v~~~Da~~~l~----~~~~~~f 160 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIP-----RAPRVKIRVDDARMVAE----SFTPASR 160 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCC-----CTTTEEEEESCHHHHHH----TCCTTCE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcccc-----CCCceEEEECcHHHHHh----hccCCCC
Confidence 399999999999999999976 4569999999999999999988651 13789999999776433 2234689
Q ss_pred eEEecCccccc
Q psy5757 111 DFLPHAPAESW 121 (139)
Q Consensus 111 D~vi~~~~~~~ 121 (139)
|+|+++...++
T Consensus 161 DvIi~D~~~~~ 171 (317)
T 3gjy_A 161 DVIIRDVFAGA 171 (317)
T ss_dssp EEEEECCSTTS
T ss_pred CEEEECCCCcc
Confidence 99999876553
No 176
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.35 E-value=1.3e-12 Score=94.78 Aligned_cols=81 Identities=19% Similarity=0.279 Sum_probs=65.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|..+..+++...+..+++++|+++.+++.|++++.... +.++++++.+|+.+. .+
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----g~~~v~~~~~d~~~~-------~~ 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY----DIGNVRTSRSDIADF-------IS 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS----CCTTEEEECSCTTTC-------CC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC----CCCcEEEEECchhcc-------Cc
Confidence 5678899999999999999999985455699999999999999999987620 236899999996552 12
Q ss_pred CCceeEEecCcc
Q psy5757 107 FDRYDFLPHAPA 118 (139)
Q Consensus 107 ~~~~D~vi~~~~ 118 (139)
.++||+|+++.+
T Consensus 177 ~~~fD~Vi~~~~ 188 (275)
T 1yb2_A 177 DQMYDAVIADIP 188 (275)
T ss_dssp SCCEEEEEECCS
T ss_pred CCCccEEEEcCc
Confidence 457999999653
No 177
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.35 E-value=1e-12 Score=96.05 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=76.5
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...++..+. .++.+|||+|||+|..+..+++... +++++|+++.+++.|++++.. +. --..+++++++|+
T Consensus 72 ~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~ 142 (299)
T 3g2m_A 72 AREFATRTG---PVSGPVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPA---DVRDRCTLVQGDM 142 (299)
T ss_dssp HHHHHHHHC---CCCSCEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCH---HHHTTEEEEECBT
T ss_pred HHHHHHhhC---CCCCcEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhccc---ccccceEEEeCch
Confidence 344444443 3445999999999999999999853 899999999999999999876 21 0015799999996
Q ss_pred hhhhHHHhhhccCCceeEEec-Cccccccccc-----eeeeeeeccCCCC
Q psy5757 95 IKRIETVELMMKFDRYDFLPH-APAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~-~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
.+ ++ ..++||+|++ ..++|++... ....++.++|+|.
T Consensus 143 ~~-~~------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 185 (299)
T 3g2m_A 143 SA-FA------LDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGK 185 (299)
T ss_dssp TB-CC------CSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEE
T ss_pred hc-CC------cCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcE
Confidence 55 21 1467998884 5678877532 2344667777764
No 178
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.34 E-value=9.7e-13 Score=90.78 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=69.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
++++ +|||+|||+|..+..+++... +++++|+++.+++.++++..... .+++++.+|+.+ + ..+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~-~-----~~~ 91 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKG------VKITTVQSNLAD-F-----DIV 91 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHT------CCEEEECCBTTT-B-----SCC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcC------CceEEEEcChhh-c-----CCC
Confidence 4666 999999999999999998743 99999999999999999887621 378899999654 1 123
Q ss_pred CCceeEEecCccccc-cccc---eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESW-MNIP---VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~-~~~p---~~~~~~~~~p~g~ 138 (139)
.++||+|+++.. |+ ..++ .....+.++|+|.
T Consensus 92 ~~~fD~v~~~~~-~~~~~~~~~~l~~~~~~L~pgG~ 126 (202)
T 2kw5_A 92 ADAWEGIVSIFC-HLPSSLRQQLYPKVYQGLKPGGV 126 (202)
T ss_dssp TTTCSEEEEECC-CCCHHHHHHHHHHHHTTCCSSEE
T ss_pred cCCccEEEEEhh-cCCHHHHHHHHHHHHHhcCCCcE
Confidence 467999998643 33 1122 2333666777764
No 179
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.34 E-value=2.4e-12 Score=97.39 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|.++..+++... .+|+++|++ .+++.|+++++. ++ ..+++++++|+.+ +. .
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~-----~ 126 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNL-----DHIVEVIEGSVED-IS-----L 126 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTC-----TTTEEEEESCGGG-CC-----C
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCC-----CCeEEEEECchhh-cC-----c
Confidence 46788999999999999999999853 399999999 999999999887 55 3569999999654 21 1
Q ss_pred cCCceeEEecCcccccccc---c---eeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNI---P---VCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~---p---~~~~~~~~~p~g~ 138 (139)
+ ++||+|++++..|++.. + ....++.++|+|.
T Consensus 127 ~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 127 P-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp S-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred C-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeE
Confidence 2 68999999887666532 2 2233566777764
No 180
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.34 E-value=1.3e-12 Score=97.46 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
+.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++... +. .++++++.+|+.+... ...+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~-----~~~~ 247 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDL-----GGRVEFFEKNLLDARN-----FEGG 247 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC-----GGGEEEEECCTTCGGG-----GTTC
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCC-----CCceEEEeCCcccCcc-----cCCC
Confidence 7899999999999999999988 4679999999 8899999998877 44 3579999999765210 0234
Q ss_pred ceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 109 RYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 109 ~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
.||+|++..++|++.++. ...++.++|+|.
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 282 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGA 282 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEE
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCE
Confidence 599999999999988752 223555666653
No 181
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.34 E-value=2.1e-13 Score=98.29 Aligned_cols=108 Identities=11% Similarity=0.030 Sum_probs=72.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcc-cc---------c-------------
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNA-RL---------L------------- 82 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~-~~---------~------------- 82 (139)
..++.+|||+|||+|.++..++.... .+|+|+|+|+.+++.|+++++. ... .| +
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 35678999999999988777665542 2799999999999999987654 100 00 0
Q ss_pred cCCcEE-EEEccchhhhHHHhhhccCCceeEEecCccccccc----c---ceeeeeeeccCCCC
Q psy5757 83 TDGHIK-FVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN----I---PVCINYTATMPEGS 138 (139)
Q Consensus 83 ~~~~i~-~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~----~---p~~~~~~~~~p~g~ 138 (139)
...++. ++++|+.+..+ + ......+||+|+++.++|++. + .....++.++|+|.
T Consensus 131 ~~~~i~~~~~~D~~~~~~-~-~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~ 192 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNP-L-APAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGH 192 (263)
T ss_dssp HHHHEEEEEECCTTSSST-T-TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred HHhhhheEEeccccCCCC-C-CccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcE
Confidence 001343 78888655211 0 011245899999999999862 2 23445788888885
No 182
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.34 E-value=1.3e-11 Score=91.04 Aligned_cols=94 Identities=10% Similarity=0.194 Sum_probs=73.4
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccc
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGM 94 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~ 94 (139)
....+++.+. ..++.++||+|||+|..+..+++..+ .++|+++|+|+.+++.|++++.. .+ .+++++++|+
T Consensus 14 Ll~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~-----~g-~~v~~v~~d~ 84 (301)
T 1m6y_A 14 MVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKE-----FS-DRVSLFKVSY 84 (301)
T ss_dssp THHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGG-----GT-TTEEEEECCG
T ss_pred HHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHh-----cC-CcEEEEECCH
Confidence 4667777775 57888999999999999999999974 56999999999999999999876 22 5899999997
Q ss_pred hhhhHHHhhhccCCceeEEecCcc
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
.+ +..........+||.|++++.
T Consensus 85 ~~-l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 85 RE-ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp GG-HHHHHHHTTCSCEEEEEEECS
T ss_pred HH-HHHHHHhcCCCCCCEEEEcCc
Confidence 65 332111112257999998875
No 183
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.34 E-value=1.6e-12 Score=97.32 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=76.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++.. +. .++++++.+|+.+.+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~------- 246 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGL-----SDRVDVVEGDFFEPL------- 246 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTC-----TTTEEEEECCTTSCC-------
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCCCC-------
Confidence 3567899999999999999999988 4679999999 8999999999877 54 358999999965421
Q ss_pred cCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
+ ..||+|+++.++|++.++. ...++.++|+|.
T Consensus 247 ~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~ 283 (360)
T 1tw3_A 247 P-RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGR 283 (360)
T ss_dssp S-SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEE
T ss_pred C-CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcE
Confidence 1 2499999999999887663 223555666663
No 184
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.33 E-value=4e-12 Score=95.23 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|.++..+++.. ..+|+++|+++ +++.|+++++. ++ .++++++.+|+.+ +.
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~l-----~~~v~~~~~d~~~-~~------ 112 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEE-VS------ 112 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTT-CC------
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcCC-----CCcEEEEEcchhh-CC------
Confidence 3578899999999999999999874 34999999996 88999988877 54 3689999999654 11
Q ss_pred cCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
..++||+|+++..++++..+. ....+.++|+|.
T Consensus 113 ~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 150 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGN 150 (348)
T ss_dssp CSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEE
T ss_pred CCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeE
Confidence 125799999998866554321 122466677764
No 185
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.33 E-value=4.9e-12 Score=94.80 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=77.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++.. +. ..+++++.+|+.+.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-------- 252 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGV-----ADRMRGIAVDIYKE-------- 252 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC-----TTTEEEEECCTTTS--------
T ss_pred CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCC-----CCCEEEEeCccccC--------
Confidence 4677899999999999999999997 4679999999 9999999999877 44 34699999996541
Q ss_pred cCCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
+....|+|++..++|++.++ ....++.++|+|.
T Consensus 253 ~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~ 290 (359)
T 1x19_A 253 SYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGR 290 (359)
T ss_dssp CCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCE
T ss_pred CCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCE
Confidence 12334999999999988762 2334777788874
No 186
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.33 E-value=2e-13 Score=96.61 Aligned_cols=100 Identities=14% Similarity=0.063 Sum_probs=70.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCC-HHHHHHH---HHHHHh-hccccccCCcEEEEEccchhhhHHH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHV-PQLVNSS---IQNILH-SNARLLTDGHIKFVALGMIKRIETV 101 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~-~~~~~~a---~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~ 101 (139)
..++.+|||+|||+|..+..+++.. +..+|+|+|+| +.+++.| +++... +. .++.++++|+.+ ++
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v~~~~~d~~~-l~-- 91 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGL------SNVVFVIAAAES-LP-- 91 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSEEEECCBTTB-CC--
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCeEEEEcCHHH-hh--
Confidence 3677899999999999999999765 46799999999 6666665 776665 43 689999999665 22
Q ss_pred hhhccCCceeEEecCcccccc-----cc---ceeeeeeeccCCCC
Q psy5757 102 ELMMKFDRYDFLPHAPAESWM-----NI---PVCINYTATMPEGS 138 (139)
Q Consensus 102 ~~~~~~~~~D~vi~~~~~~~~-----~~---p~~~~~~~~~p~g~ 138 (139)
.. .++.+|.+.++.+..+. .+ .....++.++|+|.
T Consensus 92 -~~-~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~ 134 (225)
T 3p2e_A 92 -FE-LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAH 134 (225)
T ss_dssp -GG-GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEE
T ss_pred -hh-ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcE
Confidence 11 23678888887653321 11 23344677777774
No 187
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.33 E-value=7.5e-12 Score=96.31 Aligned_cols=83 Identities=22% Similarity=0.322 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|.++..+++... +|+|+|+++.+++.|++++.. ++ .+++++.+|+.+.+..+. .
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~~~---~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~d~~~~l~~~~--~ 352 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQAA---SVVGVEGVPALVEKGQQNARLNGL------QNVTFYHENLEEDVTKQP--W 352 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCTTSCCSSSG--G
T ss_pred CCCCCEEEECCCCCCHHHHHHHhhCC---EEEEEeCCHHHHHHHHHHHHHcCC------CceEEEECCHHHHhhhhh--h
Confidence 35678999999999999999999843 999999999999999999987 54 689999999766332211 1
Q ss_pred cCCceeEEecCcccc
Q psy5757 106 KFDRYDFLPHAPAES 120 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~ 120 (139)
..++||+|+++|+..
T Consensus 353 ~~~~fD~Vv~dPPr~ 367 (433)
T 1uwv_A 353 AKNGFDKVLLDPARA 367 (433)
T ss_dssp GTTCCSEEEECCCTT
T ss_pred hcCCCCEEEECCCCc
Confidence 235799999999854
No 188
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.33 E-value=3.4e-12 Score=91.90 Aligned_cols=104 Identities=13% Similarity=-0.003 Sum_probs=76.3
Q ss_pred cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEE
Q psy5757 9 AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIK 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~ 88 (139)
++..+.++.++++.+. ..++.+|||+|||+|.++. +. .. .+.+|+++|+|+.+++.+++++.. .++++
T Consensus 3 fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~-------~~~v~ 70 (252)
T 1qyr_A 3 FLNDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL-------GPKLT 70 (252)
T ss_dssp EECCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT-------GGGEE
T ss_pred CcCCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc-------CCceE
Confidence 4556778888888885 5788899999999999999 65 44 322399999999999999887654 25899
Q ss_pred EEEccchhh-hHHHhhhccCCceeEEecCcc--------ccccccce
Q psy5757 89 FVALGMIKR-IETVELMMKFDRYDFLPHAPA--------ESWMNIPV 126 (139)
Q Consensus 89 ~~~~d~~~~-~~~~~~~~~~~~~D~vi~~~~--------~~~~~~p~ 126 (139)
++++|+.+. ++..... + +..|.|++|++ +||+..+.
T Consensus 71 ~i~~D~~~~~~~~~~~~-~-~~~~~vvsNlPY~i~~~il~~ll~~~~ 115 (252)
T 1qyr_A 71 IYQQDAMTFNFGELAEK-M-GQPLRVFGNLPYNISTPLMFHLFSYTD 115 (252)
T ss_dssp EECSCGGGCCHHHHHHH-H-TSCEEEEEECCTTTHHHHHHHHHTTGG
T ss_pred EEECchhhCCHHHhhcc-c-CCceEEEECCCCCccHHHHHHHHhcCC
Confidence 999998762 2222100 0 23589999998 66766543
No 189
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=1.2e-12 Score=93.88 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=71.2
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
+.+.+...+.++.+|||+|||+|..+..+++... +++++|+|+.+++.++++.. .+ ++.+|+.+ +
T Consensus 44 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~---------~~--~~~~d~~~-~ 108 (260)
T 2avn_A 44 IGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGV---------KN--VVEAKAED-L 108 (260)
T ss_dssp HHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTC---------SC--EEECCTTS-C
T ss_pred HHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcC---------CC--EEECcHHH-C
Confidence 3444444445788999999999999999998753 99999999999999988742 12 67788544 1
Q ss_pred HHHhhhccCCceeEEecCcc-ccccccce---eeeeeeccCCCC
Q psy5757 99 ETVELMMKFDRYDFLPHAPA-ESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~-~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+.+.++||+|++..+ +|+..++. ....+.++|+|.
T Consensus 109 -----~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 147 (260)
T 2avn_A 109 -----PFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGL 147 (260)
T ss_dssp -----CSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEE
T ss_pred -----CCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeE
Confidence 123568999999864 55655543 223566666664
No 190
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.32 E-value=2.3e-12 Score=89.85 Aligned_cols=101 Identities=18% Similarity=0.225 Sum_probs=70.4
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
++..+. ..++.+|||+|||+|..+..+++... +++++|+++.+++.++++ .++.+...|+.+ +
T Consensus 44 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~-~ 106 (227)
T 3e8s_A 44 ILLAIL--GRQPERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAA-----------GAGEVHLASYAQ-L 106 (227)
T ss_dssp HHHHHH--HTCCSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHT-----------CSSCEEECCHHH-H
T ss_pred HHHHhh--cCCCCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHh-----------cccccchhhHHh-h
Confidence 444443 25668999999999999999999843 999999999999999876 245577777544 2
Q ss_pred HHHhhhccCCceeEEecCcccccccccee---eeeeeccCCCC
Q psy5757 99 ETVELMMKFDRYDFLPHAPAESWMNIPVC---INYTATMPEGS 138 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~~~~~~~p~~---~~~~~~~p~g~ 138 (139)
.... .....+||+|+++.++| ..++.. ..++.++|+|.
T Consensus 107 ~~~~-~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~ 147 (227)
T 3e8s_A 107 AEAK-VPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGA 147 (227)
T ss_dssp HTTC-SCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEE
T ss_pred cccc-cccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeE
Confidence 1101 11234599999999999 555432 22555666653
No 191
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.32 E-value=2e-12 Score=94.05 Aligned_cols=86 Identities=16% Similarity=0.172 Sum_probs=67.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++++|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. +. .+..++++++++|+.+.+.. .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~--~~~~~rv~v~~~D~~~~l~~-----~ 145 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAG--KLDDPRVDVQVDDGFMHIAK-----S 145 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHT--TTTSTTEEEEESCSHHHHHT-----C
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHhh-----C
Confidence 466899999999999999999874 345999999999999999998754 11 02247899999998764331 2
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|+++...++
T Consensus 146 ~~~fD~Ii~d~~~~~ 160 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPV 160 (275)
T ss_dssp CSCEEEEEESCSSCC
T ss_pred CCCeeEEEECCCCCC
Confidence 467999999987654
No 192
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=8e-13 Score=97.12 Aligned_cols=87 Identities=15% Similarity=0.181 Sum_probs=64.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
++.++|||+|||+|..+..+++.. +..+++++|+|+.+++.|++++.. +. ..+..++++++++|+.+.+. ..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~-~~~~~~rv~~~~~D~~~~l~-----~~ 154 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVN-----QT 154 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHS-SCTTCTTCCEECSCSCC--------CC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhccc-ccccCCceEEEEChHHHHHh-----hc
Confidence 567899999999999999999875 345999999999999999999865 21 00124689999999876433 13
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|+++...++
T Consensus 155 ~~~fDvIi~D~~~p~ 169 (294)
T 3adn_A 155 SQTFDVIISDCTDPI 169 (294)
T ss_dssp CCCEEEEEECC----
T ss_pred CCCccEEEECCCCcc
Confidence 468999999887554
No 193
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.32 E-value=5.7e-12 Score=95.20 Aligned_cols=98 Identities=10% Similarity=0.074 Sum_probs=75.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+| |+|.++..++... +..+++++|+++.+++.|++++.. ++ .+++++++|+.+.++ . ..
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~l~---~-~~ 238 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGY------EDIEIFTFDLRKPLP---D-YA 238 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTC------CCEEEECCCTTSCCC---T-TT
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC------CCEEEEEChhhhhch---h-hc
Confidence 4678999999 9999999998875 345999999999999999999988 54 489999999765222 1 01
Q ss_pred CCceeEEecCccccccc--cceeeeeeeccCCC
Q psy5757 107 FDRYDFLPHAPAESWMN--IPVCINYTATMPEG 137 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~--~p~~~~~~~~~p~g 137 (139)
.++||+|++++++++.. ......++.++|+|
T Consensus 239 ~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 239 LHKFDTFITDPPETLEAIRAFVGRGIATLKGPR 271 (373)
T ss_dssp SSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTT
T ss_pred cCCccEEEECCCCchHHHHHHHHHHHHHcccCC
Confidence 35799999999887542 12233466777877
No 194
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.32 E-value=3.6e-12 Score=94.34 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=74.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++++|++ .+++.|++++.. ++ ..+++++.+|+.+. +.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~------~~- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGV-----ASRYHTIAGSAFEV------DY- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTC-----GGGEEEEESCTTTS------CC-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCC-----CcceEEEecccccC------CC-
Confidence 667899999999999999999997 46699999999 999999999877 54 35799999996541 11
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEG 137 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g 137 (139)
.+.||+|+++.++|++.++. ...++.++|+|
T Consensus 230 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG 265 (335)
T 2r3s_A 230 GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEG 265 (335)
T ss_dssp CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCc
Confidence 23499999999999886542 22245555555
No 195
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.31 E-value=8.6e-12 Score=93.17 Aligned_cols=105 Identities=9% Similarity=0.116 Sum_probs=78.3
Q ss_pred hhcccccChHHHHHHHHHhccc--CCCCCeEEEEcccCChhHHHHHHHcCCC----ceEEEEeCCHHHHHHHHHHHHh-h
Q psy5757 5 KIGAAIGGISAILTYLSIIQPH--LNENSKVLEIGSGSGYLTNMISELMNST----GQVIGIEHVPQLVNSSIQNILH-S 77 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~iLdiG~G~G~~~~~l~~~~~~~----~~v~~~d~~~~~~~~a~~~~~~-~ 77 (139)
.+|..+++..+...+...+... ..++.+|||+|||+|.++..+++..... .+++|+|+++.+++.|+.++.. +
T Consensus 104 ~~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g 183 (344)
T 2f8l_A 104 QVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR 183 (344)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT
T ss_pred ccCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC
Confidence 3577777776544444444211 2356799999999999999999887422 5899999999999999999876 3
Q ss_pred ccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 78 NARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 78 ~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
. +++++++|.... ...++||+|++||+++++.
T Consensus 184 ~-------~~~i~~~D~l~~-------~~~~~fD~Ii~NPPfg~~~ 215 (344)
T 2f8l_A 184 Q-------KMTLLHQDGLAN-------LLVDPVDVVISDLPVGYYP 215 (344)
T ss_dssp C-------CCEEEESCTTSC-------CCCCCEEEEEEECCCSEES
T ss_pred C-------CceEEECCCCCc-------cccCCccEEEECCCCCCcC
Confidence 2 578899996541 1246799999999987764
No 196
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=1.1e-11 Score=87.84 Aligned_cols=106 Identities=20% Similarity=0.224 Sum_probs=76.1
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEcc
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALG 93 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d 93 (139)
....+...+. +.++.+|||+|||+|..+..+++.. .+++++|+++.+++.|+++... +. .+++++..+|
T Consensus 79 ~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d 148 (248)
T 2yvl_A 79 DSFYIALKLN--LNKEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNL-----GKNVKFFNVD 148 (248)
T ss_dssp HHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTC-----CTTEEEECSC
T ss_pred hHHHHHHhcC--CCCCCEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCC-----CCcEEEEEcC
Confidence 3444444443 5678899999999999999999983 3999999999999999999877 43 3689999999
Q ss_pred chhhhHHHhhhccCCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
+.+.+ .+.+.||+|++++.-. ........+.++|+|.
T Consensus 149 ~~~~~------~~~~~~D~v~~~~~~~--~~~l~~~~~~L~~gG~ 185 (248)
T 2yvl_A 149 FKDAE------VPEGIFHAAFVDVREP--WHYLEKVHKSLMEGAP 185 (248)
T ss_dssp TTTSC------CCTTCBSEEEECSSCG--GGGHHHHHHHBCTTCE
T ss_pred hhhcc------cCCCcccEEEECCcCH--HHHHHHHHHHcCCCCE
Confidence 65522 0235799999976411 1122333566777764
No 197
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.31 E-value=2.5e-12 Score=95.36 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=76.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++.. ++ .++++++.+|+.+. .
T Consensus 167 ~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-------~- 230 (334)
T 2ip2_A 167 RG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLA-----GERVSLVGGDMLQE-------V- 230 (334)
T ss_dssp TT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHH-----TTSEEEEESCTTTC-------C-
T ss_pred CC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCC-----CCcEEEecCCCCCC-------C-
Confidence 44 899999999999999999988 4669999999 9999999998876 54 36899999996541 1
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
.+.||+|++..++|++.++. ...++.++|+|.
T Consensus 231 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~ 267 (334)
T 2ip2_A 231 PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGR 267 (334)
T ss_dssp CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCE
T ss_pred CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 25699999999999776653 333677788774
No 198
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.31 E-value=1.4e-12 Score=96.57 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=67.8
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++++|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. +. ..+..++++++++|+.+.++. .
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~-----~ 148 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLER-----T 148 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHH-----C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHh-----c
Confidence 566899999999999999999875 345999999999999999998754 11 001136899999997663331 2
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|+++...|+
T Consensus 149 ~~~fD~Ii~d~~~~~ 163 (314)
T 1uir_A 149 EERYDVVIIDLTDPV 163 (314)
T ss_dssp CCCEEEEEEECCCCB
T ss_pred CCCccEEEECCCCcc
Confidence 467999999988776
No 199
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.31 E-value=3e-11 Score=89.40 Aligned_cols=80 Identities=11% Similarity=0.130 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|..+..+++..+..++++++|+++.+++.+++++.+ +. .+++++++|+.+ +. .
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~-~~---~-- 183 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLH-IG---E-- 183 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGG-GG---G--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhh-cc---c--
Confidence 57889999999999999999999886567999999999999999999988 54 689999999765 22 1
Q ss_pred cCCceeEEecCcc
Q psy5757 106 KFDRYDFLPHAPA 118 (139)
Q Consensus 106 ~~~~~D~vi~~~~ 118 (139)
..++||+|+++++
T Consensus 184 ~~~~fD~Il~d~P 196 (315)
T 1ixk_A 184 LNVEFDKILLDAP 196 (315)
T ss_dssp GCCCEEEEEEECC
T ss_pred ccccCCEEEEeCC
Confidence 2357999999765
No 200
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.31 E-value=2.9e-12 Score=94.42 Aligned_cols=104 Identities=14% Similarity=0.079 Sum_probs=72.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. .. ....++++++.+|+.+... ...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~----~~~ 166 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVR----QTP 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHH----SSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHH----hcc
Confidence 567899999999999999999874 345999999999999999998742 10 0124789999999665222 113
Q ss_pred CCceeEEecCcccccccc-------ceeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNI-------PVCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~-------p~~~~~~~~~p~g~ 138 (139)
.++||+|+++.+.++.+. .....++.++|+|.
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~ 205 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGI 205 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEEEEEE
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcE
Confidence 568999999887665332 12333566666664
No 201
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=4.1e-12 Score=90.41 Aligned_cols=95 Identities=18% Similarity=0.245 Sum_probs=68.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|..+..+++... +++++|+|+.+++.|+++..... .+++++++|+.+ +. ..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~-~~------~~ 103 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERN------LKIEFLQGDVLE-IA------FK 103 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT------CCCEEEESCGGG-CC------CC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcC------CceEEEECChhh-cc------cC
Confidence 4678999999999999999998743 99999999999999999987611 368999999654 11 12
Q ss_pred CceeEEecCc-ccccccc--c---eeeeeeeccCCCC
Q psy5757 108 DRYDFLPHAP-AESWMNI--P---VCINYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~-~~~~~~~--p---~~~~~~~~~p~g~ 138 (139)
++||+|++.. .+++... + ....++.++|+|.
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 140 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGV 140 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeE
Confidence 5799999763 3444321 1 1223555566653
No 202
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.31 E-value=2.5e-12 Score=95.65 Aligned_cols=82 Identities=16% Similarity=0.301 Sum_probs=65.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|.++..+++.. ..+|+++|++ .+++.|++++.. ++ .++++++.+|+.+ + ..
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~~-----~~~i~~~~~d~~~-~-----~~ 101 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNGF-----SDKITLLRGKLED-V-----HL 101 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTTC-----TTTEEEEESCTTT-S-----CC
T ss_pred hcCCCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcCC-----CCCEEEEECchhh-c-----cC
Confidence 3577899999999999999999874 2389999999 599999999887 54 3679999999655 2 12
Q ss_pred cCCceeEEecCcccccc
Q psy5757 106 KFDRYDFLPHAPAESWM 122 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~ 122 (139)
+.++||+|++++..+.+
T Consensus 102 ~~~~~D~Ivs~~~~~~l 118 (328)
T 1g6q_1 102 PFPKVDIIISEWMGYFL 118 (328)
T ss_dssp SSSCEEEEEECCCBTTB
T ss_pred CCCcccEEEEeCchhhc
Confidence 34689999998764443
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.30 E-value=2.5e-11 Score=88.11 Aligned_cols=85 Identities=15% Similarity=0.163 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|..+..+++..+..++++++|+++.+++.+++++.. +. .+++++++|+.+....+ ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~--~~ 152 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDYL--LK 152 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHHH--HH
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchhh--hh
Confidence 57889999999999999999999875447999999999999999999988 54 68999999976522111 01
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
..++||+|+++++.
T Consensus 153 ~~~~fD~Vl~d~Pc 166 (274)
T 3ajd_A 153 NEIFFDKILLDAPC 166 (274)
T ss_dssp TTCCEEEEEEEECC
T ss_pred ccccCCEEEEcCCC
Confidence 24579999998764
No 204
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.30 E-value=5.2e-12 Score=97.08 Aligned_cols=94 Identities=14% Similarity=0.144 Sum_probs=73.0
Q ss_pred ccccc-ChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccC
Q psy5757 7 GAAIG-GISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTD 84 (139)
Q Consensus 7 ~~~~~-~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~ 84 (139)
+.++. .+.....+..++.. +.++.+|||+|||+|.++..+++... +|+++|+++.+++.|++++.. ++
T Consensus 268 ~~F~q~n~~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl------ 337 (425)
T 2jjq_A 268 NSFFQTNSYQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNV------ 337 (425)
T ss_dssp TSCCCSBHHHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTC------
T ss_pred ccccccCHHHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCC------
Confidence 34443 33445555565544 57788999999999999999998754 999999999999999999987 54
Q ss_pred CcEEEEEccchhhhHHHhhhccCCceeEEecCccc
Q psy5757 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 85 ~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~ 119 (139)
. ++++.+|+.+.+. ++||+|+++++.
T Consensus 338 ~-v~~~~~d~~~~~~--------~~fD~Vv~dPPr 363 (425)
T 2jjq_A 338 D-AEFEVASDREVSV--------KGFDTVIVDPPR 363 (425)
T ss_dssp C-EEEEECCTTTCCC--------TTCSEEEECCCT
T ss_pred c-EEEEECChHHcCc--------cCCCEEEEcCCc
Confidence 5 9999999765211 279999999984
No 205
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.30 E-value=1.1e-11 Score=94.26 Aligned_cols=85 Identities=20% Similarity=0.207 Sum_probs=66.7
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|.++..+++... .+|+++|+++.+++.|++++..+- +..++++++.+|+.+.+..+.. ..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ng---l~~~~v~~~~~D~~~~~~~~~~--~~ 291 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNK---LDLSKAEFVRDDVFKLLRTYRD--RG 291 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTT---CCGGGEEEEESCHHHHHHHHHH--TT
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECCHHHHHHHHHh--cC
Confidence 5778999999999999999999742 399999999999999999998721 1012899999998774443211 24
Q ss_pred CceeEEecCccc
Q psy5757 108 DRYDFLPHAPAE 119 (139)
Q Consensus 108 ~~~D~vi~~~~~ 119 (139)
.+||+|+++++.
T Consensus 292 ~~fD~Ii~dpP~ 303 (396)
T 3c0k_A 292 EKFDVIVMDPPK 303 (396)
T ss_dssp CCEEEEEECCSS
T ss_pred CCCCEEEECCCC
Confidence 579999999874
No 206
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.29 E-value=1.1e-11 Score=90.28 Aligned_cols=104 Identities=17% Similarity=0.146 Sum_probs=66.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHH-----Hh-hccccccCCcEEEEEccchhhhHH
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH-VPQLVNSSIQNI-----LH-SNARLLTDGHIKFVALGMIKRIET 100 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~-~~~~~~~a~~~~-----~~-~~~~~~~~~~i~~~~~d~~~~~~~ 100 (139)
.++.+|||+|||+|..+..+++... .+|+++|+ ++.+++.|+++. .. +.. .-...+++++..+..+....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~-~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSE-TVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccc-cCCCCCeEEEEecCCCccHH
Confidence 5778999999999999999888642 38999999 899999999998 33 220 00003677776553321222
Q ss_pred HhhhccCCceeEEecCccccccccce---eeeeeecc
Q psy5757 101 VELMMKFDRYDFLPHAPAESWMNIPV---CINYTATM 134 (139)
Q Consensus 101 ~~~~~~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~ 134 (139)
+......++||+|++..++++..++. ....+.++
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLA 191 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred HHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhc
Confidence 21111246799999977777654432 22345555
No 207
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.29 E-value=7.9e-12 Score=95.03 Aligned_cols=84 Identities=18% Similarity=0.340 Sum_probs=67.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.+++++|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++.. ++ ..+++++++|+.+.+..+..
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~-----~~~v~~~~~d~~~~~~~~~~-- 285 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGV-----EDRMKFIVGSAFEEMEKLQK-- 285 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHH--
T ss_pred hhCCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEECCHHHHHHHHHh--
Confidence 3478899999999999999999873 23899999999999999999987 54 23899999997764433211
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
...+||+|+++++.
T Consensus 286 ~~~~fD~Vi~dpP~ 299 (396)
T 2as0_A 286 KGEKFDIVVLDPPA 299 (396)
T ss_dssp TTCCEEEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 24679999999874
No 208
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.29 E-value=1.8e-11 Score=89.25 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=69.2
Q ss_pred HhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHH
Q psy5757 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIET 100 (139)
Q Consensus 22 ~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~ 100 (139)
.+...++++++|||+|||+|.++..++.... ++|+++|++|.+++.++++++. ++ ..+++++.+|+.+ +.
T Consensus 118 ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v-----~~~v~~~~~D~~~-~~- 188 (278)
T 3k6r_A 118 RMAKVAKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRD-FP- 188 (278)
T ss_dssp HHHHHCCTTCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTT-CC-
T ss_pred HHHHhcCCCCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEeCcHHH-hc-
Confidence 3444568899999999999999999998864 3899999999999999999998 65 4679999999765 21
Q ss_pred HhhhccCCceeEEecCcc
Q psy5757 101 VELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 101 ~~~~~~~~~~D~vi~~~~ 118 (139)
..+.||.|+++++
T Consensus 189 -----~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 189 -----GENIADRILMGYV 201 (278)
T ss_dssp -----CCSCEEEEEECCC
T ss_pred -----cccCCCEEEECCC
Confidence 2357999999976
No 209
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.28 E-value=7.7e-13 Score=94.56 Aligned_cols=107 Identities=12% Similarity=-0.002 Sum_probs=72.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcc-cc---------c-c------------
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNA-RL---------L-T------------ 83 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~-~~---------~-~------------ 83 (139)
.++.+|||+|||+|..+..++.... .+++++|+++.+++.+++++.. +.. .| + +
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 5667999999999999999887653 4899999999999999988755 100 00 0 0
Q ss_pred CCcE-EEEEccchhhhHHHhhhccCCceeEEecCcccc----ccccce---eeeeeeccCCCC
Q psy5757 84 DGHI-KFVALGMIKRIETVELMMKFDRYDFLPHAPAES----WMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 84 ~~~i-~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~----~~~~p~---~~~~~~~~p~g~ 138 (139)
..++ +++++|+.+... . .....++||+|+++.++| +..++. ...++.++|+|.
T Consensus 133 ~~~v~~~~~~d~~~~~~-~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~ 193 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQP-L-GGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGF 193 (265)
T ss_dssp HHHEEEEEECCTTSSST-T-TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhheeEEEeeeccCCC-C-CccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcE
Confidence 0127 889999665211 0 011126799999999999 433332 333666777764
No 210
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.28 E-value=1.3e-12 Score=91.18 Aligned_cols=92 Identities=21% Similarity=0.272 Sum_probs=68.9
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. .+++.+|+.+ + ..+.+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~-~---~~~~~~ 91 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL------------DHVVLGDIET-M---DMPYEE 91 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS------------SEEEESCTTT-C---CCCSCT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC------------CcEEEcchhh-c---CCCCCC
Confidence 57789999999999999999998 3 49999999999999887653 2467777543 1 112234
Q ss_pred CceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
++||+|+++.++|++.++... ..+.++|+|.
T Consensus 92 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~ 125 (230)
T 3cc8_A 92 EQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGV 125 (230)
T ss_dssp TCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEE
T ss_pred CccCEEEECChhhhcCCHHHHHHHHHHHcCCCCE
Confidence 689999999999999876422 2555666653
No 211
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=5.7e-12 Score=90.61 Aligned_cols=86 Identities=15% Similarity=0.314 Sum_probs=64.9
Q ss_pred HHHHHhcccC-CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchh
Q psy5757 18 TYLSIIQPHL-NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIK 96 (139)
Q Consensus 18 ~~~~~l~~~~-~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~ 96 (139)
.+.+.+...+ .++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|+++. .++.+..+|+.+
T Consensus 73 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~ 141 (269)
T 1p91_A 73 AIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHR 141 (269)
T ss_dssp HHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTS
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhh
Confidence 3444444333 577899999999999999999986 3459999999999999998763 467788888543
Q ss_pred hhHHHhhhccCCceeEEecCcccc
Q psy5757 97 RIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 97 ~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
+ +.+.++||+|+++.+.+
T Consensus 142 -~-----~~~~~~fD~v~~~~~~~ 159 (269)
T 1p91_A 142 -L-----PFSDTSMDAIIRIYAPC 159 (269)
T ss_dssp -C-----SBCTTCEEEEEEESCCC
T ss_pred -C-----CCCCCceeEEEEeCChh
Confidence 1 22346899999877643
No 212
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.28 E-value=3.2e-12 Score=93.91 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=64.2
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. +. .+..++++++++|+.+.+. ..
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~l~-----~~ 160 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSC--GFDDPRAEIVIANGAEYVR-----KF 160 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHGG-----GC
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhcc--ccCCCceEEEECcHHHHHh-----hC
Confidence 456899999999999999999875 345999999999999999998754 11 0223789999999765332 12
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|++++..+|
T Consensus 161 ~~~fD~Ii~d~~~~~ 175 (296)
T 1inl_A 161 KNEFDVIIIDSTDPT 175 (296)
T ss_dssp SSCEEEEEEEC----
T ss_pred CCCceEEEEcCCCcc
Confidence 467999999876553
No 213
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.28 E-value=7.2e-12 Score=93.55 Aligned_cols=85 Identities=20% Similarity=0.141 Sum_probs=65.8
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.|++++.. +. .+..++++++++|+.+.+. ..+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~--gl~~~rv~~~~~D~~~~l~----~~~ 191 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAI--GYEDPRVNLVIGDGVAFLK----NAA 191 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHG--GGGSTTEEEEESCHHHHHH----TSC
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEECCHHHHHH----hcc
Confidence 566899999999999999999875 356999999999999999998764 10 0123689999999765332 112
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
.++||+|++++..
T Consensus 192 ~~~fDlIi~d~~~ 204 (334)
T 1xj5_A 192 EGSYDAVIVDSSD 204 (334)
T ss_dssp TTCEEEEEECCCC
T ss_pred CCCccEEEECCCC
Confidence 4679999998763
No 214
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.28 E-value=8.9e-12 Score=90.72 Aligned_cols=104 Identities=11% Similarity=0.191 Sum_probs=72.0
Q ss_pred CCCeEEEEcccCCh----hHHHHHHHcCC---CceEEEEeCCHHHHHHHHHHHHh-hc-c--------ccc---c-----
Q psy5757 29 ENSKVLEIGSGSGY----LTNMISELMNS---TGQVIGIEHVPQLVNSSIQNILH-SN-A--------RLL---T----- 83 (139)
Q Consensus 29 ~~~~iLdiG~G~G~----~~~~l~~~~~~---~~~v~~~d~~~~~~~~a~~~~~~-~~-~--------~~~---~----- 83 (139)
+..+|||+|||||. ++..+++..+. ..+++|+|+|+.+++.|+++... .. + ..+ .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 55566666432 34899999999999999987521 00 0 000 0
Q ss_pred --------CCcEEEEEccchhhhHHHhhhcc-CCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 84 --------DGHIKFVALGMIKRIETVELMMK-FDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 84 --------~~~i~~~~~d~~~~~~~~~~~~~-~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
..+++|.+.|+.+ . +.+ .++||+|+|..+++++.++ ....+..++|+|-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~-~-----~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~ 247 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLE-K-----QYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGL 247 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTC-S-----SCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEE
T ss_pred ceeechhhcccCeEEecccCC-C-----CCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcE
Confidence 0368899998654 1 111 3579999999999998766 3444778888874
No 215
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.28 E-value=7.5e-12 Score=94.84 Aligned_cols=80 Identities=13% Similarity=0.252 Sum_probs=66.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
++.+|||+|||+|.++..++.... +|+++|+++.+++.|++++.. +. .+++++++|+.+.+..+.. ..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~~~~~--~~ 277 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFR---EVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLRRLEK--EG 277 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEE---EEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHHHHHH--TT
T ss_pred CCCeEEEeeeccCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHHHHHh--cC
Confidence 778999999999999999999843 999999999999999999988 54 6699999998774443211 24
Q ss_pred CceeEEecCccc
Q psy5757 108 DRYDFLPHAPAE 119 (139)
Q Consensus 108 ~~~D~vi~~~~~ 119 (139)
.+||+|+++++.
T Consensus 278 ~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 278 ERFDLVVLDPPA 289 (382)
T ss_dssp CCEEEEEECCCC
T ss_pred CCeeEEEECCCC
Confidence 679999999874
No 216
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.27 E-value=7.4e-13 Score=101.00 Aligned_cols=93 Identities=14% Similarity=0.135 Sum_probs=67.9
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEE--EEEccchhhhHHHhhhc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIK--FVALGMIKRIETVELMM 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~--~~~~d~~~~~~~~~~~~ 105 (139)
.++.+|||+|||+|.++..+++... +++++|+|+.+++.|+++- . .... +...+ ...+..
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~-~--------~~~~~~~~~~~----~~~l~~-- 167 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKG-I--------RVRTDFFEKAT----ADDVRR-- 167 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTT-C--------CEECSCCSHHH----HHHHHH--
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcC-C--------Ccceeeechhh----Hhhccc--
Confidence 5778999999999999999998754 9999999999999988761 1 1111 11122 222222
Q ss_pred cCCceeEEecCccccccccceee---eeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPVCI---NYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g~ 138 (139)
+.++||+|+++.++||+.+|... .++.++|+|.
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~ 203 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGV 203 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEE
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeE
Confidence 34689999999999999987543 3677777774
No 217
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.27 E-value=3.4e-12 Score=85.41 Aligned_cols=83 Identities=11% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh--HHHhhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI--ETVELM 104 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~ 104 (139)
..++.+|||+|||+|..+..+++..++..+++++|+++ ++. ..+++++.+|+.+.- ..+...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~---------------~~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP---------------IVGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC---------------CTTEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc---------------cCcEEEEEcccccchhhhhhhcc
Confidence 57788999999999999999999965556999999997 532 257888999976521 111111
Q ss_pred ccCCceeEEecCccccccccc
Q psy5757 105 MKFDRYDFLPHAPAESWMNIP 125 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~p 125 (139)
.+.++||+|+++.++|+...+
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~ 104 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTP 104 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCH
T ss_pred CCCCceeEEEECCCccccCCC
Confidence 235689999999998876543
No 218
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.27 E-value=8e-12 Score=93.25 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=63.6
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.+.++.+|||+|||+|.++.. ++. ..+|+++|+|+.+++.|++++.. ++ ..+++++++|+.+.+
T Consensus 192 ~~~~~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l-----~~~v~~~~~D~~~~~------ 256 (336)
T 2yx1_A 192 KVSLNDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKL-----EHKIIPILSDVREVD------ 256 (336)
T ss_dssp HCCTTCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCC------
T ss_pred hcCCCCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECChHHhc------
Confidence 456889999999999999999 773 34999999999999999999988 44 358999999965521
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
++||+|+++++.
T Consensus 257 ---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 257 ---VKGNRVIMNLPK 268 (336)
T ss_dssp ---CCEEEEEECCTT
T ss_pred ---CCCcEEEECCcH
Confidence 679999999763
No 219
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.27 E-value=6.1e-12 Score=98.02 Aligned_cols=96 Identities=14% Similarity=0.173 Sum_probs=71.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|.++..+++.. ..+|+++|+++ +++.|++++.. ++ .++++++.+|+.+ +. .
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl-----~~~v~~~~~d~~~-~~------~ 221 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEE-VS------L 221 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTC-----TTTEEEEESCTTT-CC------C
T ss_pred cCCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCC-----CCcEEEEECchhh-Cc------c
Confidence 567899999999999999998853 34999999998 99999999887 54 3689999999654 11 1
Q ss_pred CCceeEEecCccccccccc-----eeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIP-----VCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p-----~~~~~~~~~p~g~ 138 (139)
.++||+|++++.+++...+ .....+.++|+|.
T Consensus 222 ~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~ 258 (480)
T 3b3j_A 222 PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGN 258 (480)
T ss_dssp SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEE
T ss_pred CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCE
Confidence 2579999999885544322 1112456666663
No 220
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.27 E-value=5.7e-12 Score=90.55 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=75.0
Q ss_pred hhcc-cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT 83 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~ 83 (139)
.+|+ ++..+.+..++++.+. ..++.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++ ..
T Consensus 8 ~~GQnfl~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~-~~------- 75 (249)
T 3ftd_A 8 SFGQHLLVSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI-GD------- 75 (249)
T ss_dssp CCCSSCEECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS-CC-------
T ss_pred cccccccCCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc-cC-------
Confidence 4677 5567778888888886 5678899999999999999999983 23999999999999999877 32
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCcccc
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
.+++++++|+.+ +. .....+. ..|++|++++
T Consensus 76 -~~v~~i~~D~~~-~~---~~~~~~~-~~vv~NlPy~ 106 (249)
T 3ftd_A 76 -ERLEVINEDASK-FP---FCSLGKE-LKVVGNLPYN 106 (249)
T ss_dssp -TTEEEECSCTTT-CC---GGGSCSS-EEEEEECCTT
T ss_pred -CCeEEEEcchhh-CC---hhHccCC-cEEEEECchh
Confidence 689999999765 21 1111123 3888888754
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.27 E-value=4e-12 Score=93.78 Aligned_cols=86 Identities=15% Similarity=0.163 Sum_probs=65.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. .. .+..++++++++|+.+.++ ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~--~~~~~rv~v~~~Da~~~l~-----~~ 165 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAI--GYSSSKLTLHVGDGFEFMK-----QN 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHH-----TC
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHh-----hC
Confidence 566899999999999999999875 345999999999999999998754 10 0224789999999765333 13
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|+++...++
T Consensus 166 ~~~fD~Ii~d~~~~~ 180 (304)
T 2o07_A 166 QDAFDVIITDSSDPM 180 (304)
T ss_dssp SSCEEEEEEECC---
T ss_pred CCCceEEEECCCCCC
Confidence 467999999887654
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=4.6e-12 Score=92.40 Aligned_cols=85 Identities=18% Similarity=0.168 Sum_probs=65.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccc-------cCCcEEEEEccchhhhH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLL-------TDGHIKFVALGMIKRIE 99 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~-------~~~~i~~~~~d~~~~~~ 99 (139)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++ ... ..+ ..++++++.+|+.+.+.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~-~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KID-NGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTT-TTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhc-cccccccccCCCCcEEEEECchHHHhc
Confidence 356689999999999999999998 3 459999999999999999987 300 001 24789999999765333
Q ss_pred HHhhhccCCceeEEecCccccc
Q psy5757 100 TVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 100 ~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
. .++||+|+++++.++
T Consensus 149 ---~---~~~fD~Ii~d~~~~~ 164 (281)
T 1mjf_A 149 ---N---NRGFDVIIADSTDPV 164 (281)
T ss_dssp ---H---CCCEEEEEEECCCCC
T ss_pred ---c---cCCeeEEEECCCCCC
Confidence 1 467999999987554
No 223
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.26 E-value=5.3e-11 Score=89.80 Aligned_cols=95 Identities=13% Similarity=0.164 Sum_probs=70.4
Q ss_pred HHHHHHHhcccCC-CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEcc
Q psy5757 16 ILTYLSIIQPHLN-ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALG 93 (139)
Q Consensus 16 ~~~~~~~l~~~~~-~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d 93 (139)
...+..++.+... .+.+|||+|||+|.++..+++... +|+++|+++.+++.|++++.. ++ .+++++.+|
T Consensus 199 ~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~---~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~d 269 (369)
T 3bt7_A 199 NIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFD---RVLATEIAKPSVAAAQYNIAANHI------DNVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSS---EEEEECCCHHHHHHHHHHHHHTTC------CSEEEECCC
T ss_pred HHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCC------CceEEEECC
Confidence 3444444433332 357899999999999999998654 999999999999999999987 54 689999999
Q ss_pred chhhhHHHhhhc----------cCCceeEEecCccc
Q psy5757 94 MIKRIETVELMM----------KFDRYDFLPHAPAE 119 (139)
Q Consensus 94 ~~~~~~~~~~~~----------~~~~~D~vi~~~~~ 119 (139)
+.+.+..+.... ...+||+|+.+|+.
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr 305 (369)
T 3bt7_A 270 AEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPR 305 (369)
T ss_dssp SHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT
T ss_pred HHHHHHHHhhccccccccccccccCCCCEEEECcCc
Confidence 876443321100 01379999999874
No 224
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.25 E-value=1.1e-11 Score=89.44 Aligned_cols=86 Identities=13% Similarity=0.102 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCH-------HHHHHHHHHHHh-hccccccCCcEEEEEccchhhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVP-------QLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~-------~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
..++.+|||+|||+|..+..+++... +|+++|+++ .+++.|+++... +. ..+++++++|+.+.+
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g~---~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-----~~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLGL---TVTAFEQHPAVACLLSDGIRRALLNPETQDT-----AARINLHFGNAAEQM 152 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTTC---CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH-----HTTEEEEESCHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhCC---EEEEEECChhhhHHHHHHHHHHHhHHHhhCC-----ccCeEEEECCHHHHH
Confidence 34668999999999999999999753 899999999 999999888776 44 235999999976643
Q ss_pred HHHhhhccCCceeEEecCcccccc
Q psy5757 99 ETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
+.+... .++||+|+++|.+++.
T Consensus 153 ~~~~~~--~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 153 PALVKT--QGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHHH--HCCCSEEEECCCC---
T ss_pred Hhhhcc--CCCccEEEECCCCCCc
Confidence 322110 1579999999988763
No 225
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.24 E-value=5.9e-11 Score=91.57 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=82.0
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcC------------CCceEEEEeCCHHHHHHHHH
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMN------------STGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~------------~~~~v~~~d~~~~~~~~a~~ 72 (139)
+.|+.+++..++..+.+.+. ..++.+|+|+|||+|.+...+++... ...+++|+|+++.+++.|+.
T Consensus 149 ~~G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~ 226 (445)
T 2okc_A 149 GAGQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASM 226 (445)
T ss_dssp CCGGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHH
T ss_pred cCCcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHH
Confidence 35778888888888888886 36678999999999999999988641 12389999999999999999
Q ss_pred HHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 73 NILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 73 ~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
++.. +. ...+.++.++|..... ...+||+|++||+++...
T Consensus 227 nl~l~g~----~~~~~~i~~gD~l~~~-------~~~~fD~Iv~NPPf~~~~ 267 (445)
T 2okc_A 227 NLYLHGI----GTDRSPIVCEDSLEKE-------PSTLVDVILANPPFGTRP 267 (445)
T ss_dssp HHHHTTC----CSSCCSEEECCTTTSC-------CSSCEEEEEECCCSSCCC
T ss_pred HHHHhCC----CcCCCCEeeCCCCCCc-------ccCCcCEEEECCCCCCcc
Confidence 9876 43 1116778999965411 124799999999987543
No 226
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.23 E-value=7.3e-12 Score=93.03 Aligned_cols=84 Identities=18% Similarity=0.186 Sum_probs=65.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.|++++.. .. .+..++++++++|+.+.++. .
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~--~~~~~~v~~~~~D~~~~l~~-----~ 186 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLEN-----V 186 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHH-----C
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEEccHHHHHhh-----c
Confidence 466899999999999999999875 345999999999999999998764 10 02236899999997653321 2
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
.++||+|++++..
T Consensus 187 ~~~fDvIi~d~~~ 199 (321)
T 2pt6_A 187 TNTYDVIIVDSSD 199 (321)
T ss_dssp CSCEEEEEEECCC
T ss_pred CCCceEEEECCcC
Confidence 4679999998753
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.23 E-value=6.7e-12 Score=92.98 Aligned_cols=87 Identities=11% Similarity=0.143 Sum_probs=65.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.... ..+..++++++++|+.+.+.. ..
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~-~~~~~~rv~~~~~D~~~~l~~-----~~ 179 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMS-CGFSHPKLDLFCGDGFEFLKN-----HK 179 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTS-GGGGCTTEEEECSCHHHHHHH-----CT
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhc-cccCCCCEEEEEChHHHHHHh-----cC
Confidence 456899999999999999999875 35699999999999999999876410 001236899999997663331 34
Q ss_pred CceeEEecCccccc
Q psy5757 108 DRYDFLPHAPAESW 121 (139)
Q Consensus 108 ~~~D~vi~~~~~~~ 121 (139)
++||+|+++...++
T Consensus 180 ~~fD~Ii~d~~~~~ 193 (314)
T 2b2c_A 180 NEFDVIITDSSDPV 193 (314)
T ss_dssp TCEEEEEECCC---
T ss_pred CCceEEEEcCCCCC
Confidence 67999999886443
No 228
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.22 E-value=1.4e-12 Score=93.19 Aligned_cols=98 Identities=20% Similarity=0.316 Sum_probs=75.5
Q ss_pred hhcc-cccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcccccc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLT 83 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~ 83 (139)
.+|+ ++..+.....+++.+. ..++.+|||+|||+|.++..+++... +++++|+|+.+++.++++...
T Consensus 6 ~~gq~fl~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~~---~v~~id~~~~~~~~a~~~~~~------- 73 (245)
T 1yub_A 6 KYSQNFLTSEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKISK---QVTSIELDSHLFNLSSEKLKL------- 73 (245)
T ss_dssp CSCCCBCCCTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHSS---EEEESSSSCSSSSSSSCTTTT-------
T ss_pred ccCCCCCCCHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhCC---eEEEEECCHHHHHHHHHHhcc-------
Confidence 4677 5566777888888875 56788999999999999999999863 999999999999888776643
Q ss_pred CCcEEEEEccchhhhHHHhhhccCCceeEEecCcccc
Q psy5757 84 DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 84 ~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
.++++++++|+.+ +. .. ..++| .|++|++++
T Consensus 74 ~~~v~~~~~D~~~-~~---~~-~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 74 NTRVTLIHQDILQ-FQ---FP-NKQRY-KIVGNIPYH 104 (245)
T ss_dssp CSEEEECCSCCTT-TT---CC-CSSEE-EEEEECCSS
T ss_pred CCceEEEECChhh-cC---cc-cCCCc-EEEEeCCcc
Confidence 3689999999765 21 11 12468 788887654
No 229
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.22 E-value=1e-11 Score=90.71 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=66.8
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++++|||+|||+|..+..+++.. +..+++++|+++.+++.|++++.. +. .+..++++++++|+.+.+.. .
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~l~~-----~ 148 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLEN-----V 148 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHH-----C
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhcc--ccCCCcEEEEECChHHHHHh-----C
Confidence 466899999999999999999875 355999999999999999998764 10 01247899999997663331 2
Q ss_pred CCceeEEecCccccc
Q psy5757 107 FDRYDFLPHAPAESW 121 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~ 121 (139)
.++||+|+++...++
T Consensus 149 ~~~fD~Ii~d~~~~~ 163 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPI 163 (283)
T ss_dssp CSCEEEEEEECCCTT
T ss_pred CCCceEEEEcCCCCC
Confidence 467999999876544
No 230
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.21 E-value=2.6e-11 Score=92.31 Aligned_cols=95 Identities=14% Similarity=0.192 Sum_probs=72.3
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccC
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTD 84 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~ 84 (139)
..|+.++++..+..+.+.+. ..++.+|||+|||+|.++..++++..+..+++|+|+++.+++.|
T Consensus 17 ~~g~~~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------- 80 (421)
T 2ih2_A 17 SLGRVETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------- 80 (421)
T ss_dssp ----CCCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------
T ss_pred cCceEeCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------
Confidence 45778888888888888885 24567999999999999999999864456999999999877544
Q ss_pred CcEEEEEccchhhhHHHhhhccCCceeEEecCcccccc
Q psy5757 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 85 ~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
.+++++++|+.+. . ..++||+|++||++...
T Consensus 81 ~~~~~~~~D~~~~-~------~~~~fD~Ii~NPPy~~~ 111 (421)
T 2ih2_A 81 PWAEGILADFLLW-E------PGEAFDLILGNPPYGIV 111 (421)
T ss_dssp TTEEEEESCGGGC-C------CSSCEEEEEECCCCCCB
T ss_pred CCCcEEeCChhhc-C------ccCCCCEEEECcCccCc
Confidence 3678899996551 1 23579999999997544
No 231
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.21 E-value=1.9e-11 Score=84.10 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=58.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh-------
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNS-TGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI------- 98 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~-~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 98 (139)
++++.+|||+|||+|.++..+++..++ .++++++|+++.. . .++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~-------~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P-------IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C-------CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C-------CCCceEEEccccchhhhhhccc
Confidence 577889999999999999999998743 5799999999721 1 257888888876521
Q ss_pred ------------HHHhhhccCCceeEEecCcccccc
Q psy5757 99 ------------ETVELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 99 ------------~~~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
..+....+..+||+|+++.++|+.
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~ 119 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI 119 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCC
Confidence 011111234679999999988874
No 232
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.21 E-value=4.7e-11 Score=90.37 Aligned_cols=76 Identities=14% Similarity=0.225 Sum_probs=62.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.+++.|||+|||+|.++..+++.+.. +|+++|.++ +++.|++.++. ++ .++++++.+++.+ +. .
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~-~~~~a~~~~~~n~~-----~~~i~~i~~~~~~-~~---l--- 146 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASA-IWQQAREVVRFNGL-----EDRVHVLPGPVET-VE---L--- 146 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECST-THHHHHHHHHHTTC-----TTTEEEEESCTTT-CC---C---
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChH-HHHHHHHHHHHcCC-----CceEEEEeeeeee-ec---C---
Confidence 57899999999999999999887753 899999995 88999998887 65 5789999999655 21 1
Q ss_pred CCceeEEecCcc
Q psy5757 107 FDRYDFLPHAPA 118 (139)
Q Consensus 107 ~~~~D~vi~~~~ 118 (139)
.+++|+|++.+.
T Consensus 147 pe~~DvivsE~~ 158 (376)
T 4hc4_A 147 PEQVDAIVSEWM 158 (376)
T ss_dssp SSCEEEEECCCC
T ss_pred CccccEEEeecc
Confidence 367999999665
No 233
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.20 E-value=8.1e-11 Score=89.93 Aligned_cols=84 Identities=18% Similarity=0.154 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|..+..+++... +|+++|+|+.+++.|++++.... .+..+++++++|+.+.+... .
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g~---~V~~VD~s~~~l~~Ar~N~~~~~---~gl~~i~~i~~Da~~~L~~~----~ 160 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKAS---QGIYIERNDETAVAARHNIPLLL---NEGKDVNILTGDFKEYLPLI----K 160 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTCS---EEEEEESCHHHHHHHHHHHHHHS---CTTCEEEEEESCGGGSHHHH----H
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHhHHHhc---cCCCcEEEEECcHHHhhhhc----c
Confidence 44589999999999999999998764 99999999999999999997620 02368999999987744321 1
Q ss_pred CCceeEEecCcccc
Q psy5757 107 FDRYDFLPHAPAES 120 (139)
Q Consensus 107 ~~~~D~vi~~~~~~ 120 (139)
..+||+|+++|+..
T Consensus 161 ~~~fDvV~lDPPrr 174 (410)
T 3ll7_A 161 TFHPDYIYVDPARR 174 (410)
T ss_dssp HHCCSEEEECCEEC
T ss_pred CCCceEEEECCCCc
Confidence 24699999999854
No 234
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.20 E-value=1.2e-11 Score=92.42 Aligned_cols=94 Identities=12% Similarity=0.050 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
+.++.+|||+|||+|..+..+++.. +..+++++|++ .++. +++... +. .++++++.+|+.+ ..
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~--~~~~~~~~~-----~~~v~~~~~d~~~-------~~ 245 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVA--RHRLDAPDV-----AGRWKVVEGDFLR-------EV 245 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHT--TCCCCCGGG-----TTSEEEEECCTTT-------CC
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhh--cccccccCC-----CCCeEEEecCCCC-------CC
Confidence 4567899999999999999999998 46789999994 4444 333322 22 3679999999642 12
Q ss_pred cCCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
+ +||+|++..++|++.++. ...++.++|+|.
T Consensus 246 p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~ 281 (348)
T 3lst_A 246 P--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGR 281 (348)
T ss_dssp C--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCE
T ss_pred C--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 2 799999999999998872 334788888885
No 235
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.20 E-value=1.8e-10 Score=89.77 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=69.9
Q ss_pred HHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhH
Q psy5757 21 SIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIE 99 (139)
Q Consensus 21 ~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~ 99 (139)
..+.....++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++++.+ +. .+++++++|+.+ +.
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~-~~ 181 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRV-FG 181 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTT-HH
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHH-hh
Confidence 44442223889999999999999999999986567999999999999999999988 54 689999999765 22
Q ss_pred HHhhhccCCceeEEecCcc
Q psy5757 100 TVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 100 ~~~~~~~~~~~D~vi~~~~ 118 (139)
. . ..++||+|+++++
T Consensus 182 ~---~-~~~~fD~Il~D~P 196 (479)
T 2frx_A 182 A---A-VPEMFDAILLDAP 196 (479)
T ss_dssp H---H-STTCEEEEEEECC
T ss_pred h---h-ccccCCEEEECCC
Confidence 1 1 2357999999765
No 236
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.20 E-value=1.3e-10 Score=85.99 Aligned_cols=83 Identities=10% Similarity=0.201 Sum_probs=67.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.+++.+|||+|||+|+.+..+++.....++|+++|+++.+++.+++++++ +. .+++++++|+.+.... ..
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~---~~ 170 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPS---DP 170 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTT---CG
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCcc---cc
Confidence 57889999999999999999999876567999999999999999999988 54 7899999997652110 00
Q ss_pred cCCceeEEecCcc
Q psy5757 106 KFDRYDFLPHAPA 118 (139)
Q Consensus 106 ~~~~~D~vi~~~~ 118 (139)
...+||.|+++++
T Consensus 171 ~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 171 RYHEVHYILLDPS 183 (309)
T ss_dssp GGTTEEEEEECCC
T ss_pred ccCCCCEEEEcCC
Confidence 1246999998776
No 237
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.20 E-value=1.3e-10 Score=90.04 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=71.1
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~ 97 (139)
....+. ..++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++++.+ +. .++.++++|+.+.
T Consensus 97 ~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------~nv~v~~~Da~~l 168 (456)
T 3m4x_A 97 VGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------SNAIVTNHAPAEL 168 (456)
T ss_dssp HHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------SSEEEECCCHHHH
T ss_pred HHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeCCHHHh
Confidence 344443 57889999999999999999999886667999999999999999999998 65 7899999996652
Q ss_pred hHHHhhhccCCceeEEecCcc
Q psy5757 98 IETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~ 118 (139)
... ..++||+|+++++
T Consensus 169 ~~~-----~~~~FD~Il~DaP 184 (456)
T 3m4x_A 169 VPH-----FSGFFDRIVVDAP 184 (456)
T ss_dssp HHH-----HTTCEEEEEEECC
T ss_pred hhh-----ccccCCEEEECCC
Confidence 111 1367999999876
No 238
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.19 E-value=1.1e-11 Score=90.90 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=69.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEE-EccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFV-ALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~-~~d~~~~~~~~~~~~~ 106 (139)
.++.+|||+|||||.++..+++... .+|+|+|+++.|++++.+.- +++... ..|+.. +.. ...+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~----------~rv~~~~~~ni~~-l~~--~~l~ 148 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQD----------DRVRSMEQYNFRY-AEP--VDFT 148 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTC----------TTEEEECSCCGGG-CCG--GGCT
T ss_pred ccccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhC----------cccceecccCcee-cch--hhCC
Confidence 3678999999999999999988742 39999999999998864431 333222 234222 110 1112
Q ss_pred CCceeEEecCccccccccceeeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~~~~~~~~~p~g~ 138 (139)
..+||+++++.+||++.......++.++|+|.
T Consensus 149 ~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~ 180 (291)
T 3hp7_A 149 EGLPSFASIDVSFISLNLILPALAKILVDGGQ 180 (291)
T ss_dssp TCCCSEEEECCSSSCGGGTHHHHHHHSCTTCE
T ss_pred CCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCE
Confidence 34599999999999988878888888999885
No 239
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.19 E-value=1.2e-10 Score=88.39 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcC-------------------------------------CCceEEEEeCCHHHHHH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMN-------------------------------------STGQVIGIEHVPQLVNS 69 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~-------------------------------------~~~~v~~~d~~~~~~~~ 69 (139)
..++.++||++||+|.++..++.... +..+++|+|+++.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 46778999999999999999988752 12479999999999999
Q ss_pred HHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCcccc
Q psy5757 70 SIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 70 a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
|++++.. ++ ..++++.++|+.+ +. ..++||+|++||+++
T Consensus 273 Ar~Na~~~gl-----~~~i~~~~~D~~~-l~------~~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 273 ARENAEIAGV-----DEYIEFNVGDATQ-FK------SEDEFGFIITNPPYG 312 (385)
T ss_dssp HHHHHHHHTC-----GGGEEEEECCGGG-CC------CSCBSCEEEECCCCC
T ss_pred HHHHHHHcCC-----CCceEEEECChhh-cC------cCCCCcEEEECCCCc
Confidence 9999988 65 3579999999765 21 235799999999975
No 240
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.18 E-value=1.3e-10 Score=91.83 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=80.5
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCC-----------------CceEEEEeCCHHHH
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNS-----------------TGQVIGIEHVPQLV 67 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~-----------------~~~v~~~d~~~~~~ 67 (139)
+.|+.+++..++..+.+.+. ..++.+|+|.+||+|.+...+++.... ..+++|+|+++.++
T Consensus 147 ~~G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~ 224 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTR 224 (541)
T ss_dssp ---CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHH
T ss_pred cCCeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHH
Confidence 35778888888888888886 367789999999999999998876521 13799999999999
Q ss_pred HHHHHHHHh-hccccccCCc-----EEEEEccchhhhHHHhhhccCCceeEEecCccccccc
Q psy5757 68 NSSIQNILH-SNARLLTDGH-----IKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123 (139)
Q Consensus 68 ~~a~~~~~~-~~~~~~~~~~-----i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~ 123 (139)
+.|+.++.. +. .+ .++.++|.+.... ....+||+|++||+++...
T Consensus 225 ~lA~~nl~l~gi------~~~~~~~~~I~~gDtL~~~~-----~~~~~fD~Vv~NPPf~~~~ 275 (541)
T 2ar0_A 225 RLALMNCLLHDI------EGNLDHGGAIRLGNTLGSDG-----ENLPKAHIVATNPPFGSAA 275 (541)
T ss_dssp HHHHHHHHTTTC------CCBGGGTBSEEESCTTSHHH-----HTSCCEEEEEECCCCTTCS
T ss_pred HHHHHHHHHhCC------CccccccCCeEeCCCccccc-----ccccCCeEEEECCCccccc
Confidence 999999876 44 33 7788999654211 1246799999999977543
No 241
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.18 E-value=1.3e-11 Score=93.90 Aligned_cols=97 Identities=18% Similarity=0.250 Sum_probs=68.3
Q ss_pred CCCCCeEEEEccc------CChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHH
Q psy5757 27 LNENSKVLEIGSG------SGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIET 100 (139)
Q Consensus 27 ~~~~~~iLdiG~G------~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 100 (139)
..++.+||||||| +|..+..+++...+.++++++|+++.+. .. .++++++++|+.+ ++.
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~-------~~rI~fv~GDa~d-lpf 278 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VD-------ELRIRTIQGDQND-AEF 278 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GC-------BTTEEEEECCTTC-HHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hc-------CCCcEEEEecccc-cch
Confidence 3567899999999 7888888888765678999999999862 11 3789999999766 221
Q ss_pred H-hhhccCCceeEEecCccccccccc---eeeeeeeccCCCCC
Q psy5757 101 V-ELMMKFDRYDFLPHAPAESWMNIP---VCINYTATMPEGSY 139 (139)
Q Consensus 101 ~-~~~~~~~~~D~vi~~~~~~~~~~p---~~~~~~~~~p~g~~ 139 (139)
. ......++||+|+++.+ |+..++ ....++.++|+|.|
T Consensus 279 ~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvl 320 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLY 320 (419)
T ss_dssp HHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEE
T ss_pred hhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEE
Confidence 1 00011367999999865 554443 34447888888753
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.17 E-value=1.7e-10 Score=89.50 Aligned_cols=86 Identities=10% Similarity=0.101 Sum_probs=69.8
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~ 97 (139)
+...+. ..++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++++.+ +. . ++++++|+.+
T Consensus 93 ~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~- 162 (464)
T 3m6w_A 93 VGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRA- 162 (464)
T ss_dssp HHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHH-
T ss_pred HHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHH-
Confidence 344443 57889999999999999999999986667999999999999999999998 55 5 8899999665
Q ss_pred hHHHhhhccCCceeEEecCcc
Q psy5757 98 IETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~ 118 (139)
+.. ...++||+|+++++
T Consensus 163 l~~----~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 163 LAE----AFGTYFHRVLLDAP 179 (464)
T ss_dssp HHH----HHCSCEEEEEEECC
T ss_pred hhh----hccccCCEEEECCC
Confidence 221 11467999998776
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.17 E-value=3e-10 Score=92.15 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=66.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.++++|||+|||+|.++..++.... .+|+++|+|+.+++.|++++.. ++ ..++++++++|+.+.+.. .
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl----~~~~v~~i~~D~~~~l~~-----~ 606 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGL----TGRAHRLIQADCLAWLRE-----A 606 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTC----CSTTEEEEESCHHHHHHH-----C
T ss_pred cCCCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEEecCHHHHHHh-----c
Confidence 4688999999999999999998653 2799999999999999999988 54 114899999998764432 2
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
.++||+|+++++.
T Consensus 607 ~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 607 NEQFDLIFIDPPT 619 (703)
T ss_dssp CCCEEEEEECCCS
T ss_pred CCCccEEEECCcc
Confidence 4679999999973
No 244
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.17 E-value=2.9e-11 Score=84.55 Aligned_cols=93 Identities=17% Similarity=0.245 Sum_probs=66.8
Q ss_pred HHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh
Q psy5757 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 19 ~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 98 (139)
.+..+.. ..++.+|||+|||+|..+..+++. +++|+++.+++.++++ +++++.+|+.+ +
T Consensus 38 ~~~~l~~-~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~------------~~~~~~~d~~~-~ 96 (219)
T 1vlm_A 38 ELQAVKC-LLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR------------GVFVLKGTAEN-L 96 (219)
T ss_dssp HHHHHHH-HCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT------------TCEEEECBTTB-C
T ss_pred HHHHHHH-hCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc------------CCEEEEccccc-C
Confidence 3344443 234889999999999998877543 9999999999988775 35678888543 1
Q ss_pred HHHhhhccCCceeEEecCccccccccceee---eeeeccCCC
Q psy5757 99 ETVELMMKFDRYDFLPHAPAESWMNIPVCI---NYTATMPEG 137 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~~~~~~~p~~~---~~~~~~p~g 137 (139)
+.+.++||+|+++.++|++.++... ..+.++|+|
T Consensus 97 -----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 133 (219)
T 1vlm_A 97 -----PLKDESFDFALMVTTICFVDDPERALKEAYRILKKGG 133 (219)
T ss_dssp -----CSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEE
T ss_pred -----CCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCc
Confidence 1234679999999999999876422 245555655
No 245
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=1.9e-10 Score=87.64 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=67.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCC-------------------------------------CceEEEEeCCHHHHHH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNS-------------------------------------TGQVIGIEHVPQLVNS 69 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~-------------------------------------~~~v~~~d~~~~~~~~ 69 (139)
..++..+||++||+|.++..++..... ..+++|+|+++.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 467789999999999999988876531 1469999999999999
Q ss_pred HHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccc
Q psy5757 70 SIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 70 a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
|++++.. ++ ..+++++++|+.+ +. ..++||+|++||+++.
T Consensus 279 Ar~Na~~~gl-----~~~I~~~~~D~~~-~~------~~~~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 279 AKQNAVEAGL-----GDLITFRQLQVAD-FQ------TEDEYGVVVANPPYGE 319 (393)
T ss_dssp HHHHHHHTTC-----TTCSEEEECCGGG-CC------CCCCSCEEEECCCCCC
T ss_pred HHHHHHHcCC-----CCceEEEECChHh-CC------CCCCCCEEEECCCCcc
Confidence 9999988 65 3469999999765 21 1357999999999753
No 246
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.16 E-value=3e-10 Score=86.25 Aligned_cols=83 Identities=11% Similarity=0.093 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCC-------------------------------------CceEEEEeCCHHHHHH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNS-------------------------------------TGQVIGIEHVPQLVNS 69 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~-------------------------------------~~~v~~~d~~~~~~~~ 69 (139)
.+++..++|.+||+|.+...++..... ..+++|+|+|+.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 467889999999999999988876531 1469999999999999
Q ss_pred HHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccc
Q psy5757 70 SIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 70 a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
|++++.. ++ ..+++++++|+.+ +. ..++||+|++||+++.
T Consensus 272 Ar~Na~~~gl-----~~~I~~~~~D~~~-l~------~~~~fD~Iv~NPPYG~ 312 (384)
T 3ldg_A 272 ARKNAREVGL-----EDVVKLKQMRLQD-FK------TNKINGVLISNPPYGE 312 (384)
T ss_dssp HHHHHHHTTC-----TTTEEEEECCGGG-CC------CCCCSCEEEECCCCTT
T ss_pred HHHHHHHcCC-----CCceEEEECChHH-CC------ccCCcCEEEECCchhh
Confidence 9999988 65 3569999999765 21 1247999999999764
No 247
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.15 E-value=4.7e-10 Score=85.40 Aligned_cols=78 Identities=9% Similarity=0.073 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.+++++|||+|||+|.++..+++... .|+++|+|+.+++.|++++.. +. . ..+.++|+.+.+.. .
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~------~-~~~~~~D~~~~l~~----~ 277 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGL------R-VDIRHGEALPTLRG----L 277 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTC------C-CEEEESCHHHHHHT----C
T ss_pred hcCCCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCC------C-CcEEEccHHHHHHH----h
Confidence 45689999999999999999999753 699999999999999999988 54 2 24668997664332 1
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
.+.||+|+++++.
T Consensus 278 -~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 278 -EGPFHHVLLDPPT 290 (393)
T ss_dssp -CCCEEEEEECCCC
T ss_pred -cCCCCEEEECCCc
Confidence 2349999999874
No 248
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.15 E-value=7.9e-11 Score=88.35 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=76.7
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.+..+|+|+|||+|..+..++++. |..+++..|. |++++.|++++.... .++++++.+|+.+ .+.
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~-----~~rv~~~~gD~~~--------~~~ 242 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQE-----EEQIDFQEGDFFK--------DPL 242 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTT--------SCC
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcc-----cCceeeecCcccc--------CCC
Confidence 456799999999999999999999 5778888887 789999988876522 3799999999654 123
Q ss_pred CceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 108 DRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
..+|++++..++|.++++. ...+++++|+|.
T Consensus 243 ~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~ 278 (353)
T 4a6d_A 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGG 278 (353)
T ss_dssp CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCE
T ss_pred CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCE
Confidence 4589999999999988874 334777888875
No 249
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.11 E-value=5.2e-10 Score=86.45 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
..++.+|||+|||+|..+..+++..+..++++++|+++.+++.+++++.. +. .+++++++|+.+. . ...
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~-~---~~~ 326 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKA-P---EII 326 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCC-S---SSS
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhc-c---hhh
Confidence 57889999999999999999999885447999999999999999999988 54 6899999996552 1 111
Q ss_pred cCCceeEEecCcc
Q psy5757 106 KFDRYDFLPHAPA 118 (139)
Q Consensus 106 ~~~~~D~vi~~~~ 118 (139)
+.++||+|+++++
T Consensus 327 ~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 327 GEEVADKVLLDAP 339 (450)
T ss_dssp CSSCEEEEEEECC
T ss_pred ccCCCCEEEEcCC
Confidence 2357999998654
No 250
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.09 E-value=1.2e-10 Score=79.73 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=55.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCC--------ceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEE-Eccchhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNST--------GQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFV-ALGMIKR 97 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~--------~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~-~~d~~~~ 97 (139)
++++.+|||+|||+|.++..+++..+.. ++++++|+++.. . ..+++++ .+|+.+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~------~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------P------LEGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------C------CTTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------c------CCCCeEEEeccCCCH
Confidence 5788999999999999999999997532 699999999731 1 2567888 8886542
Q ss_pred h-H-HHhhhccCCceeEEecCcccc
Q psy5757 98 I-E-TVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 98 ~-~-~~~~~~~~~~~D~vi~~~~~~ 120 (139)
. . .+....+.++||+|+++.+++
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~ 108 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPN 108 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCC
Confidence 1 1 111112235799999976544
No 251
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.09 E-value=5.4e-10 Score=88.19 Aligned_cols=108 Identities=15% Similarity=0.023 Sum_probs=84.2
Q ss_pred hhcccccChHHHHHHHHHhcccC--CCCCeEEEEcccCChhHHHHHHHcC--CCceEEEEeCCHHHHHHHHHHHHh-hcc
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHL--NENSKVLEIGSGSGYLTNMISELMN--STGQVIGIEHVPQLVNSSIQNILH-SNA 79 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~--~~~~~iLdiG~G~G~~~~~l~~~~~--~~~~v~~~d~~~~~~~~a~~~~~~-~~~ 79 (139)
+.|+.+++++++..+.+.+.... .++.+|+|.+||||.+...+++... ...+++|+|+++.++..|+.++.. +.
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi- 273 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV- 273 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC-
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC-
Confidence 35888999999999999886322 4678999999999999999998863 245899999999999999999876 43
Q ss_pred ccccCCcEEEEEccchhh-hHHHhhhccCCceeEEecCcccc
Q psy5757 80 RLLTDGHIKFVALGMIKR-IETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 80 ~~~~~~~i~~~~~d~~~~-~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
..+++++.++|.+.. ++. ....+||+|++||++.
T Consensus 274 ---~~~~~~I~~gDtL~~d~p~----~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 274 ---PIENQFLHNADTLDEDWPT----QEPTNFDGVLMNPPYS 308 (542)
T ss_dssp ---CGGGEEEEESCTTTSCSCC----SSCCCBSEEEECCCTT
T ss_pred ---CcCccceEecceecccccc----cccccccEEEecCCcC
Confidence 124788999996541 110 1346799999999976
No 252
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.09 E-value=2.6e-10 Score=82.34 Aligned_cols=88 Identities=9% Similarity=0.129 Sum_probs=65.3
Q ss_pred CCCC--CeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hcccccc---CCcEEEEEccchhhhHH
Q psy5757 27 LNEN--SKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLT---DGHIKFVALGMIKRIET 100 (139)
Q Consensus 27 ~~~~--~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~---~~~i~~~~~d~~~~~~~ 100 (139)
++++ .+|||+|||+|..+..++.... +|+++|+++.+...++++++. .....++ ..+++++++|..+.+..
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 3566 8999999999999999999854 899999999987777777654 2100011 15799999997663332
Q ss_pred HhhhccCCceeEEecCcccccc
Q psy5757 101 VELMMKFDRYDFLPHAPAESWM 122 (139)
Q Consensus 101 ~~~~~~~~~~D~vi~~~~~~~~ 122 (139)
+ .++||+|+++|.+++-
T Consensus 161 ~-----~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 161 I-----TPRPQVVYLDPMFPHK 177 (258)
T ss_dssp C-----SSCCSEEEECCCCCCC
T ss_pred C-----cccCCEEEEcCCCCCc
Confidence 1 2369999999998763
No 253
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=99.09 E-value=1.1e-09 Score=79.53 Aligned_cols=101 Identities=14% Similarity=0.133 Sum_probs=75.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+++.+. ++++..+||.+||.|+.+..+++. .++|+|+|.|+.+++.|++ +.. ++++++++|+.
T Consensus 11 l~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~--------~rv~lv~~~f~ 76 (285)
T 1wg8_A 11 YQEALDLLA--VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL--------PGLTVVQGNFR 76 (285)
T ss_dssp HHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC--------TTEEEEESCGG
T ss_pred HHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc--------CCEEEEECCcc
Confidence 566777775 578899999999999999999998 3599999999999999998 643 58999999977
Q ss_pred hhhHHHhhhccCCceeEEecCcc---ccccccceeeeee
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPA---ESWMNIPVCINYT 131 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~---~~~~~~p~~~~~~ 131 (139)
+ +..+-.....+++|.|+++.- +|+-..-.++.|+
T Consensus 77 ~-l~~~L~~~g~~~vDgIL~DLGvSS~Qld~~~RGFSf~ 114 (285)
T 1wg8_A 77 H-LKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQ 114 (285)
T ss_dssp G-HHHHHHHTTCSCEEEEEEECSCCHHHHHCGGGCCCSS
T ss_pred h-HHHHHHHcCCCCcCEEEeCCccccccccccccCcccc
Confidence 6 443222333467999997654 3332222455554
No 254
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.08 E-value=2.4e-10 Score=86.62 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=64.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcc----------ccccCCcEEEEEccchhhh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA----------RLLTDGHIKFVALGMIKRI 98 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~----------~~~~~~~i~~~~~d~~~~~ 98 (139)
++.+|||+|||+|..+..++++.+ ..+|+++|+++.+++.++++++.+.. ...+..+++++++|+.+.+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 678999999999999999999863 34899999999999999999987300 0002345999999976633
Q ss_pred HHHhhhccCCceeEEecCcc
Q psy5757 99 ETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 99 ~~~~~~~~~~~~D~vi~~~~ 118 (139)
... .++||+|+.+|.
T Consensus 126 ~~~-----~~~fD~I~lDP~ 140 (378)
T 2dul_A 126 AER-----HRYFHFIDLDPF 140 (378)
T ss_dssp HHS-----TTCEEEEEECCS
T ss_pred Hhc-----cCCCCEEEeCCC
Confidence 321 346999998875
No 255
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.07 E-value=5.2e-11 Score=89.06 Aligned_cols=90 Identities=16% Similarity=0.192 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++ . ++++++.+|+.+. .+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~---~--------~~v~~~~~d~~~~-------~p 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG---S--------NNLTYVGGDMFTS-------IP 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC---B--------TTEEEEECCTTTC-------CC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc---C--------CCcEEEeccccCC-------CC
Confidence 4567899999999999999999988 4669999999 888876653 1 5699999996431 12
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccC---CCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMP---EGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p---~g~ 138 (139)
.||+|+++.++|++.++. ...++.++| +|.
T Consensus 246 --~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~ 283 (352)
T 1fp2_A 246 --NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGK 283 (352)
T ss_dssp --CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCE
T ss_pred --CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcE
Confidence 399999999999888765 333777888 774
No 256
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.07 E-value=2.7e-11 Score=91.28 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ .++++++.+|+.+. .+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~-------~~ 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP-----------LSGIEHVGGDMFAS-------VP 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTC-------CC
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh-----------cCCCEEEeCCcccC-------CC
Confidence 3567899999999999999999998 4678999999 888876543 15799999996541 12
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
.+|+|+++.++|++.++. ...++.++|+|.
T Consensus 267 --~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~ 301 (372)
T 1fp1_D 267 --QGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGK 301 (372)
T ss_dssp --CEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred --CCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCE
Confidence 299999999999998764 333666677663
No 257
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.07 E-value=4.8e-11 Score=89.92 Aligned_cols=90 Identities=13% Similarity=0.148 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++ .++++++.+|+.+. .+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~-------~p 260 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFDG-------VP 260 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTC-------CC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCCC-------CC
Confidence 3456899999999999999999998 5779999999 887765542 26899999996541 12
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
. . |+|++..++|++.++. ...+++++|+|.
T Consensus 261 ~-~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 295 (368)
T 3reo_A 261 K-G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGK 295 (368)
T ss_dssp C-C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCE
T ss_pred C-C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCE
Confidence 2 2 9999999999888763 334778888884
No 258
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.06 E-value=2.3e-10 Score=82.47 Aligned_cols=85 Identities=11% Similarity=0.022 Sum_probs=70.7
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.+.+..+|||+|||+|-++..++... +.++++++|+++.+++.+++++.. +. +..+.+.|... .
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~-------~~~~~v~D~~~-------~ 193 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNV-------PHRTNVADLLE-------D 193 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTC-------CEEEEECCTTT-------S
T ss_pred ccCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCC-------CceEEEeeecc-------c
Confidence 34567799999999999999999876 578999999999999999999988 43 47888888543 2
Q ss_pred ccCCceeEEecCccccccccc
Q psy5757 105 MKFDRYDFLPHAPAESWMNIP 125 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~p 125 (139)
.+..++|+++++.++|++.+-
T Consensus 194 ~p~~~~DvaL~lkti~~Le~q 214 (281)
T 3lcv_B 194 RLDEPADVTLLLKTLPCLETQ 214 (281)
T ss_dssp CCCSCCSEEEETTCHHHHHHH
T ss_pred CCCCCcchHHHHHHHHHhhhh
Confidence 345789999999999988653
No 259
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.05 E-value=5.5e-11 Score=84.53 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=43.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHH
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNI 74 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~ 74 (139)
...+++.+. ...++.+|||+|||+|.++..+++... .+|+|+|+++.+++.++++.
T Consensus 25 L~~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 25 LEKALKEFH-LEINGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp HHHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTC
T ss_pred HHHHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhC
Confidence 444555543 124567999999999999999999842 29999999999999887754
No 260
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.04 E-value=5.1e-10 Score=79.88 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=65.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.+..+|||+|||+|.++.++. +..+++++|+|+.+++.+++++.... .+..+.+.|... ..+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g------~~~~~~v~D~~~-------~~~~ 166 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD------WDFTFALQDVLC-------APPA 166 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT------CEEEEEECCTTT-------SCCC
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeeccc-------CCCC
Confidence 567899999999999999888 45699999999999999999987721 577888888543 1234
Q ss_pred CceeEEecCcccccccc
Q psy5757 108 DRYDFLPHAPAESWMNI 124 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~ 124 (139)
+++|+++++.++|++.+
T Consensus 167 ~~~DvvLllk~lh~LE~ 183 (253)
T 3frh_A 167 EAGDLALIFKLLPLLER 183 (253)
T ss_dssp CBCSEEEEESCHHHHHH
T ss_pred CCcchHHHHHHHHHhhh
Confidence 68999999999888754
No 261
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.04 E-value=3e-11 Score=87.35 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=60.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
..+++|||+|||+|..+..+++. + .+++++|+++.+++.|++++.. .. .+..++++++.+|+.+.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~--~~~~~rv~~~~~D~~~~~-------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHE--VKNNKNFTHAKQLLDLDI-------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHH--HHTCTTEEEESSGGGSCC--------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhcc--ccCCCeEEEEechHHHHH--------
Confidence 45689999999999999999988 4 5999999999999999887643 10 022468999999965421
Q ss_pred CCceeEEecCc
Q psy5757 107 FDRYDFLPHAP 117 (139)
Q Consensus 107 ~~~~D~vi~~~ 117 (139)
++||+|+++.
T Consensus 138 -~~fD~Ii~d~ 147 (262)
T 2cmg_A 138 -KKYDLIFCLQ 147 (262)
T ss_dssp -CCEEEEEESS
T ss_pred -hhCCEEEECC
Confidence 5799999985
No 262
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.03 E-value=2e-10 Score=86.49 Aligned_cols=90 Identities=16% Similarity=0.127 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+.+..+|||+|||+|..+..+++.. |..+++++|+ +.+++.+++ .++++++.+|+.+. .+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~~-------~p 258 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFKE-------VP 258 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTC-------CC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCCC-------CC
Confidence 4567899999999999999999998 5679999999 777765542 26899999996541 12
Q ss_pred CCceeEEecCccccccccce-----eeeeeeccCCCC
Q psy5757 107 FDRYDFLPHAPAESWMNIPV-----CINYTATMPEGS 138 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p~g~ 138 (139)
. . |+|++..++|++.++. ...+++++|+|.
T Consensus 259 ~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~ 293 (364)
T 3p9c_A 259 S-G-DTILMKWILHDWSDQHCATLLKNCYDALPAHGK 293 (364)
T ss_dssp C-C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCE
T ss_pred C-C-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCE
Confidence 2 2 9999999999887653 334778888874
No 263
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.02 E-value=1.7e-09 Score=83.02 Aligned_cols=89 Identities=11% Similarity=0.082 Sum_probs=69.4
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM 94 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~ 94 (139)
...+...+. ..++.+|||+|||+|..+..+++..+ .++++++|+++.+++.+++++.. +. +++++++|+
T Consensus 235 s~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~ 304 (429)
T 1sqg_A 235 AQGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDG 304 (429)
T ss_dssp HHTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCT
T ss_pred HHHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCch
Confidence 334445554 57889999999999999999999884 47999999999999999999987 43 478889997
Q ss_pred hhhhHHHhhhccCCceeEEecCcc
Q psy5757 95 IKRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 95 ~~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
.+.... .+.++||+|+++++
T Consensus 305 ~~~~~~----~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 305 RYPSQW----CGEQQFDRILLDAP 324 (429)
T ss_dssp TCTHHH----HTTCCEEEEEEECC
T ss_pred hhchhh----cccCCCCEEEEeCC
Confidence 652211 12357999998765
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.02 E-value=2.2e-10 Score=87.12 Aligned_cols=80 Identities=10% Similarity=-0.010 Sum_probs=64.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCc-EEEEEccchhhhH-HHhhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGH-IKFVALGMIKRIE-TVELM 104 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~-i~~~~~d~~~~~~-~~~~~ 104 (139)
.++.+|||++||+|.++..++.+.+-..+|+++|+++.+++.++++++. ++ ..+ ++++.+|+.+.+. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----~~~~v~v~~~Da~~~l~~~---- 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----PEDRYEIHGMEANFFLRKE---- 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHHHSC----
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCceEEEEeCCHHHHHHHh----
Confidence 4578999999999999999999753124899999999999999999998 54 234 9999999766332 2
Q ss_pred ccCCceeEEecCc
Q psy5757 105 MKFDRYDFLPHAP 117 (139)
Q Consensus 105 ~~~~~~D~vi~~~ 117 (139)
..++||+|+.+|
T Consensus 122 -~~~~fD~V~lDP 133 (392)
T 3axs_A 122 -WGFGFDYVDLDP 133 (392)
T ss_dssp -CSSCEEEEEECC
T ss_pred -hCCCCcEEEECC
Confidence 135799999999
No 265
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.01 E-value=3.3e-10 Score=89.47 Aligned_cols=104 Identities=16% Similarity=0.113 Sum_probs=78.1
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCC--------------CceEEEEeCCHHHHHHH
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNS--------------TGQVIGIEHVPQLVNSS 70 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~--------------~~~v~~~d~~~~~~~~a 70 (139)
+.|+.+++++++..+.+.+.+ .++ +|+|.+||||.+...+++.... ..+++|+|+++.++..|
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p--~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA 299 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEP--YKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLA 299 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCC--CSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhc--CCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHH
Confidence 457889999999999998863 343 9999999999998888665410 34899999999999999
Q ss_pred HHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccc
Q psy5757 71 IQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 71 ~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
+.++.. +. ..++.+.++|.+... ..+..+||+|++||++..
T Consensus 300 ~~Nl~l~gi-----~~~i~i~~gDtL~~~-----~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 300 AMNMVIRGI-----DFNFGKKNADSFLDD-----QHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHHTTC-----CCBCCSSSCCTTTSC-----SCTTCCEEEEEECCCSSC
T ss_pred HHHHHHhCC-----CcccceeccchhcCc-----ccccccccEEEECCCcCC
Confidence 999877 54 234444777754311 112457999999999873
No 266
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.00 E-value=1.2e-11 Score=90.17 Aligned_cols=94 Identities=11% Similarity=0.017 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEE--EccchhhhHHHhhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFV--ALGMIKRIETVELM 104 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~~ 104 (139)
++++.+|||+|||+|.++..+++. . +|+|+|+++ ++..+++...... .. ..+++++ ++|+.+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gVD~s~-m~~~a~~~~~~~~--~~-~~~v~~~~~~~D~~~-------- 143 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P---NVREVKAYT-LGTSGHEKPRLVE--TF-GWNLITFKSKVDVTK-------- 143 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T---TEEEEEEEC-CCCTTSCCCCCCC--CT-TGGGEEEECSCCGGG--------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C---CEEEEECch-hhhhhhhchhhhh--hc-CCCeEEEeccCcHhh--------
Confidence 467889999999999999999988 3 899999997 5332221110000 00 1278888 888544
Q ss_pred ccCCceeEEecCcccccccc----------ceeeeeeeccCCC
Q psy5757 105 MKFDRYDFLPHAPAESWMNI----------PVCINYTATMPEG 137 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~~~~~----------p~~~~~~~~~p~g 137 (139)
.+.++||+|+++.+ ++... .....++.++|+|
T Consensus 144 l~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG 185 (276)
T 2wa2_A 144 MEPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQ 185 (276)
T ss_dssp CCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred CCCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCC
Confidence 12467999999877 43222 1233467788888
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.98 E-value=2.3e-09 Score=86.98 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=71.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHc-----------------------------------------CCC
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELM-----------------------------------------NST 54 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~-----------------------------------------~~~ 54 (139)
...++.... .+++..++|.+||||.+...++... .+.
T Consensus 179 Aa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 179 AAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 344444443 4677899999999999999888753 112
Q ss_pred ceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccc
Q psy5757 55 GQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 55 ~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
.+++|+|+++.+++.|++++.. ++ ...+++.++|+.+ +. .+...+++|+|++||++..
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv-----~~~i~~~~~D~~~-~~---~~~~~~~~d~Iv~NPPYG~ 315 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGI-----GELITFEVKDVAQ-LT---NPLPKGPYGTVLSNPPYGE 315 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEECCGGG-CC---CSCTTCCCCEEEECCCCCC
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhh-Cc---cccccCCCCEEEeCCCccc
Confidence 5899999999999999999998 66 3459999999765 21 1111237999999999764
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=2.8e-11 Score=87.69 Aligned_cols=93 Identities=10% Similarity=0.063 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEE--EccchhhhHHHhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFV--ALGMIKRIETVEL 103 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~--~~d~~~~~~~~~~ 103 (139)
++++.+|||+|||+|.++..+++. . +|+|+|+++ ++..+++.... .. . ..+++++ ++|+.+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gvD~s~-m~~~a~~~~~~~~~---~-~~~v~~~~~~~D~~~------- 135 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-P---HVMDVRAYT-LGVGGHEVPRITES---Y-GWNIVKFKSRVDIHT------- 135 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-T---TEEEEEEEC-CCCSSCCCCCCCCB---T-TGGGEEEECSCCTTT-------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-C---cEEEEECch-hhhhhhhhhhhhhc---c-CCCeEEEecccCHhH-------
Confidence 567889999999999999999987 3 899999997 43222111000 00 0 0278888 888654
Q ss_pred hccCCceeEEecCcccccccc----------ceeeeeeeccCCC
Q psy5757 104 MMKFDRYDFLPHAPAESWMNI----------PVCINYTATMPEG 137 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~~~~~~----------p~~~~~~~~~p~g 137 (139)
.+.++||+|+++.+ +.... .....++.++|+|
T Consensus 136 -l~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG 177 (265)
T 2oxt_A 136 -LPVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNP 177 (265)
T ss_dssp -SCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCC
Confidence 12467999999877 33222 1233467888888
No 269
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.95 E-value=1.5e-10 Score=80.45 Aligned_cols=87 Identities=11% Similarity=0.041 Sum_probs=60.2
Q ss_pred HHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 18 TYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 18 ~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
.+++.+. ...++.+|||+|||+|..+..++ .+++++|+++. +++++.+|+.+
T Consensus 57 ~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~~~d~~~- 108 (215)
T 2zfu_A 57 RIARDLR-QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVTVCDMAQ- 108 (215)
T ss_dssp HHHHHHH-TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEEESCTTS-
T ss_pred HHHHHHh-ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEEEecccc-
Confidence 3455554 24577899999999999888773 38999999974 34467777544
Q ss_pred hHHHhhhccCCceeEEecCccccccccce---eeeeeeccCCCC
Q psy5757 98 IETVELMMKFDRYDFLPHAPAESWMNIPV---CINYTATMPEGS 138 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~~~~~~~p~---~~~~~~~~p~g~ 138 (139)
+ +.+.++||+|+++.++|+ .++. ...++.++|+|.
T Consensus 109 ~-----~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~ 146 (215)
T 2zfu_A 109 V-----PLEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGL 146 (215)
T ss_dssp C-----SCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEE
T ss_pred C-----CCCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeE
Confidence 1 223567999999999986 4442 223566666663
No 270
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.95 E-value=2.6e-10 Score=85.41 Aligned_cols=89 Identities=19% Similarity=0.221 Sum_probs=69.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ .++++++.+|+.+ . .
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~-------~--~ 249 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG-----------NENLNFVGGDMFK-------S--I 249 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC-----------CSSEEEEECCTTT-------C--C
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc-----------CCCcEEEeCccCC-------C--C
Confidence 466899999999999999999998 4678999999 677765543 1569999999643 1 1
Q ss_pred CceeEEecCccccccccce-----eeeeeeccC---CCC
Q psy5757 108 DRYDFLPHAPAESWMNIPV-----CINYTATMP---EGS 138 (139)
Q Consensus 108 ~~~D~vi~~~~~~~~~~p~-----~~~~~~~~p---~g~ 138 (139)
..||+|+++.++|++.++. ...++.++| +|.
T Consensus 250 ~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~ 288 (358)
T 1zg3_A 250 PSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGK 288 (358)
T ss_dssp CCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCE
T ss_pred CCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcE
Confidence 2499999999999988765 233677777 764
No 271
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.94 E-value=3.2e-09 Score=83.67 Aligned_cols=106 Identities=14% Similarity=0.079 Sum_probs=80.7
Q ss_pred hhcccccChHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCC------------CceEEEEeCCHHHHHHHHH
Q psy5757 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNS------------TGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~------------~~~v~~~d~~~~~~~~a~~ 72 (139)
+.|+++++++++..+.+.+. ..++.+|+|.+||||++...+.+.... ...++|+|+++.+...|+.
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 45889999999999999987 467789999999999999888775521 2369999999999999999
Q ss_pred HHHh-hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCcccc
Q psy5757 73 NILH-SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 73 ~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
++.. +. ...++.++|..... .....+..+||+|++||+|.
T Consensus 273 Nl~lhg~------~~~~I~~~dtL~~~--~~~~~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 273 NLLLHGL------EYPRIDPENSLRFP--LREMGDKDRVDVILTNPPFG 313 (530)
T ss_dssp HHHHHTC------SCCEEECSCTTCSC--GGGCCGGGCBSEEEECCCSS
T ss_pred HHHhcCC------ccccccccccccCc--hhhhcccccceEEEecCCCC
Confidence 8876 54 45567778765311 11112235799999999975
No 272
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.94 E-value=6.3e-09 Score=78.21 Aligned_cols=87 Identities=14% Similarity=0.191 Sum_probs=66.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccC---CcEEEEEccchhhhHHHhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTD---GHIKFVALGMIKRIETVEL 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~---~~i~~~~~d~~~~~~~~~~ 103 (139)
.++++||++|||+|..+..+++.. + .+++++|+++.+++.|++++.. +. ..+.. ++++++++|+.+.+.+...
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~-~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCG-DVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC-----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhcc-ccccccCCCcEEEEECcHHHHHHhhhc
Confidence 356899999999999999999876 3 5999999999999999999764 10 00111 3799999998886553211
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
..++||+|+++++-
T Consensus 264 --~~~~fDvII~D~~d 277 (364)
T 2qfm_A 264 --EGREFDYVINDLTA 277 (364)
T ss_dssp --HTCCEEEEEEECCS
T ss_pred --cCCCceEEEECCCC
Confidence 24679999999853
No 273
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.92 E-value=8.1e-11 Score=86.84 Aligned_cols=94 Identities=13% Similarity=0.095 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeC----CHHHHHHHHHHHHhhccccccCCcEEEEEc-cchhhhHHH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH----VPQLVNSSIQNILHSNARLLTDGHIKFVAL-GMIKRIETV 101 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~----~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~ 101 (139)
++++.+|||+|||+|.++..+++. . +|+++|+ ++..++.+. ... ...++++++.+ |+.+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~---~V~gvD~~~~~~~~~~~~~~--~~~-----~~~~~v~~~~~~D~~~----- 143 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-K---NVREVKGLTKGGPGHEEPIP--MST-----YGWNLVRLQSGVDVFF----- 143 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-T---TEEEEEEECCCSTTSCCCCC--CCS-----TTGGGEEEECSCCTTT-----
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-C---CEEEEeccccCchhHHHHHH--hhh-----cCCCCeEEEecccccc-----
Confidence 567889999999999999999987 3 8999999 543321110 111 11257899988 8543
Q ss_pred hhhccCCceeEEecCccc---cccccc------eeeeeeeccCCCCC
Q psy5757 102 ELMMKFDRYDFLPHAPAE---SWMNIP------VCINYTATMPEGSY 139 (139)
Q Consensus 102 ~~~~~~~~~D~vi~~~~~---~~~~~p------~~~~~~~~~p~g~~ 139 (139)
.+.++||+|+++.++ ||..+. ....++.++|+|.+
T Consensus 144 ---l~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~ 187 (305)
T 2p41_A 144 ---IPPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQF 187 (305)
T ss_dssp ---SCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEE
T ss_pred ---CCcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEE
Confidence 124679999998775 343322 23346888999853
No 274
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.92 E-value=6.2e-09 Score=71.70 Aligned_cols=74 Identities=18% Similarity=0.367 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh--HHHhhh
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI--ETVELM 104 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~ 104 (139)
++++.+|||+|||+|.++..+++. .++|+|+|+++.. . .++++++++|+.+.- ..+...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~---------~-------~~~v~~~~~D~~~~~~~~~~~~~ 83 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME---------E-------IAGVRFIRCDIFKETIFDDIDRA 83 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC---------C-------CTTCEEEECCTTSSSHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc---------c-------CCCeEEEEccccCHHHHHHHHHH
Confidence 578899999999999999999998 3499999999731 1 268999999987521 111111
Q ss_pred cc---CCceeEEecCccc
Q psy5757 105 MK---FDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~---~~~~D~vi~~~~~ 119 (139)
.. .++||+|+++...
T Consensus 84 ~~~~~~~~~D~Vlsd~~~ 101 (191)
T 3dou_A 84 LREEGIEKVDDVVSDAMA 101 (191)
T ss_dssp HHHHTCSSEEEEEECCCC
T ss_pred hhcccCCcceEEecCCCc
Confidence 11 1389999998753
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.91 E-value=1.1e-08 Score=83.67 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=75.2
Q ss_pred hhcccccChHHHHHHHHH----hcccCCCCCeEEEEcccCChhHHHHHHHcC--CCceEEEEeCCHHHHHHH--HHHHHh
Q psy5757 5 KIGAAIGGISAILTYLSI----IQPHLNENSKVLEIGSGSGYLTNMISELMN--STGQVIGIEHVPQLVNSS--IQNILH 76 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~----l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~--~~~~v~~~d~~~~~~~~a--~~~~~~ 76 (139)
+.|++++++.++..+.+. +.....++.+|+|.|||+|.+...+++..+ ...+++|+|+++.+++.| +.++..
T Consensus 293 k~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~l 372 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLF 372 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTS
T ss_pred cCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHH
Confidence 457888888888888877 322335678999999999999999998773 135899999999999999 444432
Q ss_pred -hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCcccc
Q psy5757 77 -SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 77 -~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
... -+.....+...|+.+ .. .....+||+|++||++.
T Consensus 373 N~Ll--hGi~~~~I~~dD~L~-~~----~~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 373 PQLV--SSNNAPTITGEDVCS-LN----PEDFANVSVVVMNPPYV 410 (878)
T ss_dssp TTTC--BTTBCCEEECCCGGG-CC----GGGGTTEEEEEECCBCC
T ss_pred hhhh--cCCCcceEEecchhc-cc----ccccCCCCEEEECCCcc
Confidence 110 011233555566443 11 11246799999999984
No 276
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.84 E-value=4e-10 Score=76.14 Aligned_cols=82 Identities=11% Similarity=-0.002 Sum_probs=61.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhh-c
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELM-M 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~ 105 (139)
+.++.+|||+|||. +++|+++.+++.|+++... +++++++|+.+ +. .. .
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~-~~---~~~~ 59 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN---------EGRVSVENIKQ-LL---QSAH 59 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT---------TSEEEEEEGGG-GG---GGCC
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc---------CcEEEEechhc-Cc---cccC
Confidence 57899999999985 2389999999999887532 47889999654 22 20 1
Q ss_pred cCCceeEEecCcccccc-ccce---eeeeeeccCCCC
Q psy5757 106 KFDRYDFLPHAPAESWM-NIPV---CINYTATMPEGS 138 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~-~~p~---~~~~~~~~p~g~ 138 (139)
+.++||+|+++.++||+ .++. ...++.++|+|.
T Consensus 60 ~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGC 96 (176)
T ss_dssp CSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEE
T ss_pred CCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEE
Confidence 45789999999999999 6653 334778888875
No 277
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.78 E-value=4.6e-08 Score=72.73 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=70.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
...+++.+. .+++..++|..+|.|+.+..+++..++.++|+|+|.++.+++.++ ++. ..+++++++++.
T Consensus 46 l~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~--------~~Rv~lv~~nF~ 114 (347)
T 3tka_A 46 LDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID--------DPRFSIIHGPFS 114 (347)
T ss_dssp THHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC--------CTTEEEEESCGG
T ss_pred HHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc--------CCcEEEEeCCHH
Confidence 345666664 578899999999999999999999878889999999999999884 432 378999999977
Q ss_pred hhhHHHhhhccC-CceeEEecCcc
Q psy5757 96 KRIETVELMMKF-DRYDFLPHAPA 118 (139)
Q Consensus 96 ~~~~~~~~~~~~-~~~D~vi~~~~ 118 (139)
+ +.++...... +++|.|+.+.-
T Consensus 115 ~-l~~~L~~~g~~~~vDgILfDLG 137 (347)
T 3tka_A 115 A-LGEYVAERDLIGKIDGILLDLG 137 (347)
T ss_dssp G-HHHHHHHTTCTTCEEEEEEECS
T ss_pred H-HHHHHHhcCCCCcccEEEECCc
Confidence 6 3332222222 36999988875
No 278
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=2.5e-09 Score=78.37 Aligned_cols=67 Identities=10% Similarity=0.205 Sum_probs=48.9
Q ss_pred CCCCCeEEEEcccC------ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEE-EEccchhhhH
Q psy5757 27 LNENSKVLEIGSGS------GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKF-VALGMIKRIE 99 (139)
Q Consensus 27 ~~~~~~iLdiG~G~------G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~-~~~d~~~~~~ 99 (139)
++++.+|||+|||+ |. ..+++..++.++|+++|+++. + +++++ +++|+.+ +.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------------v------~~v~~~i~gD~~~-~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------------V------SDADSTLIGDCAT-VH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------------B------CSSSEEEESCGGG-CC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------------C------CCCEEEEECcccc-CC
Confidence 57889999999966 44 556666655679999999986 1 35677 9999654 11
Q ss_pred HHhhhccCCceeEEecCcccc
Q psy5757 100 TVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 100 ~~~~~~~~~~~D~vi~~~~~~ 120 (139)
..++||+|+++...+
T Consensus 120 ------~~~~fD~Vvsn~~~~ 134 (290)
T 2xyq_A 120 ------TANKWDLIISDMYDP 134 (290)
T ss_dssp ------CSSCEEEEEECCCCC
T ss_pred ------ccCcccEEEEcCCcc
Confidence 125799999987543
No 279
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.63 E-value=7e-08 Score=67.14 Aligned_cols=85 Identities=18% Similarity=0.104 Sum_probs=61.7
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--------
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR-------- 97 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~-------- 97 (139)
+.+.++|||+|| |+-+..+++.. .++|+++|.+++..+.|+++++. +. -...+++++.+|+.+.
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g~---~~~~~I~~~~gda~~~~~wg~p~~ 100 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANPP---AEGTEVNIVWTDIGPTGDWGHPVS 100 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSCC---CTTCEEEEEECCCSSBCGGGCBSS
T ss_pred hhCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCCceEEEEeCchhhhccccccc
Confidence 356789999998 57888888742 56999999999999999999988 41 0026899999996542
Q ss_pred ------hHHHhh---hc-cCCceeEEecCcc
Q psy5757 98 ------IETVEL---MM-KFDRYDFLPHAPA 118 (139)
Q Consensus 98 ------~~~~~~---~~-~~~~~D~vi~~~~ 118 (139)
++++.. .. ..++||+|+....
T Consensus 101 ~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 101 DAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp STTGGGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred chhhhhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 232211 11 2357999998876
No 280
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.56 E-value=5.1e-07 Score=67.75 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=66.4
Q ss_pred hhcc-cccChHHHHHHHHHhcccCC----CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhcc
Q psy5757 5 KIGA-AIGGISAILTYLSIIQPHLN----ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79 (139)
Q Consensus 5 ~~~~-~~~~~~~~~~~~~~l~~~~~----~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~ 79 (139)
.+|+ ++..+.++.++++.+...-. ++..|||||+|.|.+|..|++...+ .+++++|+++.++...++.+ .
T Consensus 29 ~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~-~--- 103 (353)
T 1i4w_A 29 FYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF-E--- 103 (353)
T ss_dssp GGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT-T---
T ss_pred CCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc-c---
Confidence 4677 55678888899988862111 3589999999999999999997532 28999999999999888876 3
Q ss_pred ccccCCcEEEEEccchh
Q psy5757 80 RLLTDGHIKFVALGMIK 96 (139)
Q Consensus 80 ~~~~~~~i~~~~~d~~~ 96 (139)
.++++++.+|+.+
T Consensus 104 ----~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 104 ----GSPLQILKRDPYD 116 (353)
T ss_dssp ----TSSCEEECSCTTC
T ss_pred ----CCCEEEEECCccc
Confidence 3789999999876
No 281
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.55 E-value=4.2e-07 Score=72.85 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=55.0
Q ss_pred CCeEEEEcccCChhHHHH---HHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 30 NSKVLEIGSGSGYLTNMI---SELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l---~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
...|+|+|||+|.++.+. +++...+.+|+++|.++ +...|++..+. ++ .++|+++++|+.+ +.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~-----~dkVtVI~gd~ee-v~------ 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW-----GSQVTVVSSDMRE-WV------ 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT-----GGGEEEEESCTTT-CC------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC-----CCeEEEEeCccee-cc------
Confidence 347999999999984444 44444445789999997 45566666665 55 5789999999766 22
Q ss_pred cCCceeEEecCcc
Q psy5757 106 KFDRYDFLPHAPA 118 (139)
Q Consensus 106 ~~~~~D~vi~~~~ 118 (139)
..+++|+|||=+-
T Consensus 425 LPEKVDIIVSEwM 437 (637)
T 4gqb_A 425 APEKADIIVSELL 437 (637)
T ss_dssp CSSCEEEEECCCC
T ss_pred CCcccCEEEEEcC
Confidence 2368999998664
No 282
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.55 E-value=5.6e-07 Score=65.90 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.+..++||-||.|.|...+.+++..+ ..+++.+|+++..++.+++.+.......+..++++++.+|+.+.+. ..
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~-----~~ 154 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN-----QT 154 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTS-----CS
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHh-----hc
Confidence 35668999999999999999998763 4499999999999999999875411111446899999999887544 23
Q ss_pred CCceeEEecCcc
Q psy5757 107 FDRYDFLPHAPA 118 (139)
Q Consensus 107 ~~~~D~vi~~~~ 118 (139)
.++||+|+....
T Consensus 155 ~~~yDvIi~D~~ 166 (294)
T 3o4f_A 155 SQTFDVIISDCT 166 (294)
T ss_dssp SCCEEEEEESCC
T ss_pred cccCCEEEEeCC
Confidence 568999998875
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.46 E-value=7.4e-08 Score=69.40 Aligned_cols=110 Identities=15% Similarity=0.044 Sum_probs=66.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc------CCC-----ceEEEEeCCH---HHHH-----------HHHHHHHhhc----
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM------NST-----GQVIGIEHVP---QLVN-----------SSIQNILHSN---- 78 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~------~~~-----~~v~~~d~~~---~~~~-----------~a~~~~~~~~---- 78 (139)
++..+|||+|+|+|+.+..+++.. .|. .+++++|..| +.+. .|++.+..+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 345699999999999998887764 443 5899999876 4433 4444443210
Q ss_pred ---ccccc--CCcEEEEEccchhhhHHHhhhccCCceeEEecCcc-c--c---ccccceeeeeeeccCCCC
Q psy5757 79 ---ARLLT--DGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPA-E--S---WMNIPVCINYTATMPEGS 138 (139)
Q Consensus 79 ---~~~~~--~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~-~--~---~~~~p~~~~~~~~~p~g~ 138 (139)
+..+. ..+++++.+|+.+.++++... ....||+|+..+- . + |-.+.....++.++|+|.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~-~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~ 208 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDS-LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGT 208 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGG-GTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccc-cCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcE
Confidence 00011 146789999987765543111 1137999998741 1 1 223334455667777664
No 284
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.41 E-value=5.5e-07 Score=72.67 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=58.2
Q ss_pred CCeEEEEcccCChhHHHHHHHc---C---------CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 30 NSKVLEIGSGSGYLTNMISELM---N---------STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~---~---------~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
+..|+|+|||+|.++.+.++.. + ...+|+++|.++.+...+++....++ .++++++.+|+.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~-----~d~VtVI~gd~ee- 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTW-----KRRVTIIESDMRS- 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTT-----TTCSEEEESCGGG-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCC-----CCeEEEEeCchhh-
Confidence 4579999999999975443332 1 23499999999988877666655544 3679999999776
Q ss_pred hHHHhhhccCCceeEEecCcccc
Q psy5757 98 IETVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 98 ~~~~~~~~~~~~~D~vi~~~~~~ 120 (139)
+.--......+++|+|||=+--.
T Consensus 484 v~lp~~~~~~ekVDIIVSElmGs 506 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELLGS 506 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCCBT
T ss_pred cccccccCCCCcccEEEEecccc
Confidence 32100011247899999877633
No 285
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.40 E-value=6.5e-07 Score=59.03 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=38.9
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCC-hhHHHHHHHcCCCceEEEEeCCHHH
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSG-YLTNMISELMNSTGQVIGIEHVPQL 66 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G-~~~~~l~~~~~~~~~v~~~d~~~~~ 66 (139)
+...+.+.+.....++.++||+|||+| ..+..|++..+. .|+++|+++.+
T Consensus 21 m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~A 71 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSH 71 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSS
T ss_pred HHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccc
Confidence 345566666655677789999999999 699999985443 89999999753
No 286
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.39 E-value=1.4e-06 Score=63.78 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=47.7
Q ss_pred HHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh
Q psy5757 14 SAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH 76 (139)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~ 76 (139)
..+.++++... .++..|||++||+|.++..+++... +++|+|+++.+++.|++++..
T Consensus 223 ~l~~~~i~~~~---~~~~~vlD~f~GsGt~~~~a~~~g~---~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 223 ELAERLVRMFS---FVGDVVLDPFAGTGTTLIAAARWGR---RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHC---CTTCEEEETTCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHH
Confidence 34555555543 6788999999999999999888764 999999999999999999876
No 287
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.38 E-value=4.5e-07 Score=68.74 Aligned_cols=86 Identities=14% Similarity=0.041 Sum_probs=51.9
Q ss_pred CCeEEEEcccCChhHHHHHHHc----------------CCCceEEEEeCC-----------HHHHHHHHHHHHhhccccc
Q psy5757 30 NSKVLEIGSGSGYLTNMISELM----------------NSTGQVIGIEHV-----------PQLVNSSIQNILHSNARLL 82 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~----------------~~~~~v~~~d~~-----------~~~~~~a~~~~~~~~~~~~ 82 (139)
..+|+|+||++|..+..++... .|+-+|+..|+. +...+.+++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 5789999999999999887761 245577788865 3333322221110
Q ss_pred cCCcEEEEEccchhhhHHHhhhccCCceeEEecCccccccccc
Q psy5757 83 TDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIP 125 (139)
Q Consensus 83 ~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p 125 (139)
..+.-++.+..-..+.+ -.+..++|+|+|+.++||+.+.
T Consensus 127 -~~~~~f~~gvpgSFy~r---lfp~~S~d~v~Ss~aLHWls~~ 165 (384)
T 2efj_A 127 -KIGSCLIGAMPGSFYSR---LFPEESMHFLHSCYCLHWLSQV 165 (384)
T ss_dssp -CTTSEEEEECCSCTTSC---CSCTTCEEEEEEESCTTBCSSS
T ss_pred -CCCceEEEecchhhhhc---cCCCCceEEEEecceeeecCCC
Confidence 01223444332211111 2346789999999999998864
No 288
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.31 E-value=1.9e-06 Score=65.15 Aligned_cols=91 Identities=13% Similarity=0.082 Sum_probs=51.4
Q ss_pred CCeEEEEcccCChhHHHHHHHc--------------CCCceEEEEeCCHHHHHHHHHHHHh-hccc------c-cc-CCc
Q psy5757 30 NSKVLEIGSGSGYLTNMISELM--------------NSTGQVIGIEHVPQLVNSSIQNILH-SNAR------L-LT-DGH 86 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~--------------~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~------~-~~-~~~ 86 (139)
..+|+|+|||+|..+..++... .|+-+++..|+...-....=+.+.. ..+. . .. .+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999999998873321 2456777878665544433333222 0000 0 00 001
Q ss_pred -EEEEEccchhhhHHHhhhccCCceeEEecCccccccccce
Q psy5757 87 -IKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPV 126 (139)
Q Consensus 87 -i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~p~ 126 (139)
+.-+.+++. .+ ..+.+++|+|+|+.++||+.+..
T Consensus 133 f~~gvpgSFy---~r---lfP~~S~d~v~Ss~aLHWls~~p 167 (374)
T 3b5i_A 133 FVAGVPGSFY---RR---LFPARTIDFFHSAFSLHWLSQVP 167 (374)
T ss_dssp EEEEEESCTT---SC---CSCTTCEEEEEEESCTTBCSSCC
T ss_pred EEEecChhhh---cc---cCCCcceEEEEecceeeeeccCc
Confidence 111223321 11 13467899999999999998543
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.26 E-value=6.1e-06 Score=62.35 Aligned_cols=87 Identities=14% Similarity=0.151 Sum_probs=65.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-h--ccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-S--NARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~--~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
.+.++||-+|.|.|...+.+.+.. + .+++.+|+++..++.+++.+.. . .......++++++.+|+.+.+.+...
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~-~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~- 280 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK- 280 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH-
T ss_pred CCCCeEEEECCCcHHHHHHHHhcC-C-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh-
Confidence 456899999999999999999864 3 4899999999999999998643 1 10111235689999998886654432
Q ss_pred ccCCceeEEecCcc
Q psy5757 105 MKFDRYDFLPHAPA 118 (139)
Q Consensus 105 ~~~~~~D~vi~~~~ 118 (139)
..++||+|+....
T Consensus 281 -~~~~yDvIIvDl~ 293 (381)
T 3c6k_A 281 -EGREFDYVINDLT 293 (381)
T ss_dssp -HTCCEEEEEEECC
T ss_pred -ccCceeEEEECCC
Confidence 2467999998754
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.24 E-value=1.4e-06 Score=63.47 Aligned_cols=84 Identities=13% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcC----CCceEEEEeCCHH--------------------------HHHHHHHHHHh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMN----STGQVIGIEHVPQ--------------------------LVNSSIQNILH- 76 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~----~~~~v~~~d~~~~--------------------------~~~~a~~~~~~- 76 (139)
.....|||+|+..|+.+..+++..+ +.++++++|..+. .++.+++++.+
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3456999999999999999887653 3569999995321 35667888877
Q ss_pred hccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCccc
Q psy5757 77 SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 77 ~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~~ 119 (139)
++ ..++++++.+|+.+.+++ .+.++||+|+.....
T Consensus 185 gl----~~~~I~li~Gda~etL~~----~~~~~~d~vfIDaD~ 219 (282)
T 2wk1_A 185 DL----LDEQVRFLPGWFKDTLPT----APIDTLAVLRMDGDL 219 (282)
T ss_dssp TC----CSTTEEEEESCHHHHSTT----CCCCCEEEEEECCCS
T ss_pred CC----CcCceEEEEeCHHHHHhh----CCCCCEEEEEEcCCc
Confidence 43 127899999997765543 234679999988763
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.22 E-value=1.1e-05 Score=60.61 Aligned_cols=86 Identities=12% Similarity=0.089 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.++|++|||++||.|+-+..++..+. .+.+++.|+++.-+...++++.+ +........++.+...|... +.. .
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~-~~~----~ 219 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK-WGE----L 219 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGG-HHH----H
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhh-cch----h
Confidence 68899999999999999999998774 56899999999999999999887 43111112578888888765 321 1
Q ss_pred cCCceeEEecCcc
Q psy5757 106 KFDRYDFLPHAPA 118 (139)
Q Consensus 106 ~~~~~D~vi~~~~ 118 (139)
..++||.|+...+
T Consensus 220 ~~~~fD~VLlDaP 232 (359)
T 4fzv_A 220 EGDTYDRVLVDVP 232 (359)
T ss_dssp STTCEEEEEEECC
T ss_pred ccccCCEEEECCc
Confidence 3467999987766
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.20 E-value=3.2e-06 Score=63.72 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
+++|+++||+||..|+++..++++.. +|+++|..+ +-.. +.. .++++++.+|+.. +. .+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~---~V~aVD~~~-l~~~----l~~-------~~~V~~~~~d~~~-~~-----~~ 267 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM---WVYSVDNGP-MAQS----LMD-------TGQVTWLREDGFK-FR-----PT 267 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC---EEEEECSSC-CCHH----HHT-------TTCEEEECSCTTT-CC-----CC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC---EEEEEEhhh-cChh----hcc-------CCCeEEEeCcccc-cc-----CC
Confidence 57899999999999999999999864 999999764 1111 111 3789999999655 21 12
Q ss_pred CCceeEEecCcccc
Q psy5757 107 FDRYDFLPHAPAES 120 (139)
Q Consensus 107 ~~~~D~vi~~~~~~ 120 (139)
...+|+|+|..+.+
T Consensus 268 ~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 268 RSNISWMVCDMVEK 281 (375)
T ss_dssp SSCEEEEEECCSSC
T ss_pred CCCcCEEEEcCCCC
Confidence 35799999998754
No 293
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.11 E-value=5.6e-07 Score=67.67 Aligned_cols=89 Identities=10% Similarity=0.062 Sum_probs=56.7
Q ss_pred CCCeEEEEcccCChhHHHHHHH---------------cCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEcc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISEL---------------MNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALG 93 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~---------------~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d 93 (139)
...+|+|+||++|..+..++.. ..|+-+|+..|...+....+-+.+.... ...+.-++.+.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~~~~~~f~~gv 126 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----DVDGVCFINGV 126 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----SCTTCEEEEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc----ccCCCEEEEec
Confidence 3457999999999888776555 2456788999988777776655543300 00122333332
Q ss_pred chhhhHHHhhhccCCceeEEecCcccccccc
Q psy5757 94 MIKRIETVELMMKFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 94 ~~~~~~~~~~~~~~~~~D~vi~~~~~~~~~~ 124 (139)
.-..+.+ -.+..++|+++|+.++||+.+
T Consensus 127 pgSFy~r---lfp~~S~d~v~Ss~aLHWls~ 154 (359)
T 1m6e_X 127 PGSFYGR---LFPRNTLHFIHSSYSLMWLSQ 154 (359)
T ss_dssp ESCSSSC---CSCTTCBSCEEEESCTTBCSS
T ss_pred chhhhhc---cCCCCceEEEEehhhhhhccc
Confidence 1111111 235678999999999999886
No 294
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.09 E-value=1.6e-05 Score=56.98 Aligned_cols=56 Identities=23% Similarity=0.201 Sum_probs=46.8
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh
Q psy5757 15 AILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH 76 (139)
Q Consensus 15 ~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~ 76 (139)
.+.+++.... .++..|||..||+|.++.+..+... +++|+|+++..++.+++++..
T Consensus 201 l~~~~i~~~~---~~~~~vlD~f~GsGtt~~~a~~~gr---~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 201 LIERIIRASS---NPNDLVLDCFMGSGTTAIVAKKLGR---NFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHHC---CTTCEEEESSCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhC---CCCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHh
Confidence 4445555443 7888999999999999999888764 999999999999999999876
No 295
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.94 E-value=7.2e-06 Score=59.33 Aligned_cols=99 Identities=12% Similarity=-0.007 Sum_probs=59.6
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
++++.+|||+|||.|.++..+++..+ ...+.++|+.-.+ . ...... .+.. .++..+..++.. . ..+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl-~---~~pi~~--~~~g-~~ii~~~~~~dv-~-----~l~ 137 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDG-H---EKPMNV--QSLG-WNIITFKDKTDI-H-----RLE 137 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTT-C---CCCCCC--CBTT-GGGEEEECSCCT-T-----TSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccC-c---cccccc--CcCC-CCeEEEecccee-h-----hcC
Confidence 57888999999999999999988753 2367888876321 0 000000 0000 144445555311 1 123
Q ss_pred CCceeEEecCcccc----ccccce-----eeeeeeccCC-CCC
Q psy5757 107 FDRYDFLPHAPAES----WMNIPV-----CINYTATMPE-GSY 139 (139)
Q Consensus 107 ~~~~D~vi~~~~~~----~~~~p~-----~~~~~~~~p~-g~~ 139 (139)
..++|+|+|+.+.+ |..... .+..+.++|+ |++
T Consensus 138 ~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~F 180 (277)
T 3evf_A 138 PVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNF 180 (277)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 56799999998766 544432 4446777888 753
No 296
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.76 E-value=1e-05 Score=58.87 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=69.3
Q ss_pred HHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchh
Q psy5757 17 LTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIK 96 (139)
Q Consensus 17 ~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~ 96 (139)
..+.+.+.. ..+..+||+-+|||.++..+.+... +++.+|.++..++..++++.. ..+++++..|+..
T Consensus 81 ~~yf~~l~~--~n~~~~LDlfaGSGaLgiEaLS~~d---~~vfvE~~~~a~~~L~~Nl~~-------~~~~~V~~~D~~~ 148 (283)
T 2oo3_A 81 LEYISVIKQ--INLNSTLSYYPGSPYFAINQLRSQD---RLYLCELHPTEYNFLLKLPHF-------NKKVYVNHTDGVS 148 (283)
T ss_dssp HHHHHHHHH--HSSSSSCCEEECHHHHHHHHSCTTS---EEEEECCSHHHHHHHTTSCCT-------TSCEEEECSCHHH
T ss_pred HHHHHHHHH--hcCCCceeEeCCcHHHHHHHcCCCC---eEEEEeCCHHHHHHHHHHhCc-------CCcEEEEeCcHHH
Confidence 344555542 2345689999999999999988553 999999999999988888765 3679999999766
Q ss_pred hhHHHhhhccCCceeEEecCccccc
Q psy5757 97 RIETVELMMKFDRYDFLPHAPAESW 121 (139)
Q Consensus 97 ~~~~~~~~~~~~~~D~vi~~~~~~~ 121 (139)
.+..+. .+..++|+|+..|++..
T Consensus 149 ~L~~l~--~~~~~fdLVfiDPPYe~ 171 (283)
T 2oo3_A 149 KLNALL--PPPEKRGLIFIDPSYER 171 (283)
T ss_dssp HHHHHC--SCTTSCEEEEECCCCCS
T ss_pred HHHHhc--CCCCCccEEEECCCCCC
Confidence 554331 12346999999999874
No 297
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.44 E-value=0.00038 Score=52.56 Aligned_cols=78 Identities=15% Similarity=0.030 Sum_probs=56.6
Q ss_pred CeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh-HHHhh-hccCC
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI-ETVEL-MMKFD 108 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~-~~~~~ 108 (139)
.+++|+.||.|+++..+....-. .+.++|+++.+++..+.++ ++..++++|+.+.. ..+.. .....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~--~v~avE~d~~a~~t~~~N~----------~~~~~~~~DI~~~~~~~~~~~~~~~~ 70 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD--VKMAVEIDQHAINTHAINF----------PRSLHVQEDVSLLNAEIIKGFFKNDM 70 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHC----------TTSEEECCCGGGCCHHHHHHHHCSCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCc--EEEEEeCCHHHHHHHHHhC----------CCCceEecChhhcCHHHHHhhcccCC
Confidence 58999999999999999887742 6789999999888777664 45667888877621 12211 11235
Q ss_pred ceeEEecCcccc
Q psy5757 109 RYDFLPHAPAES 120 (139)
Q Consensus 109 ~~D~vi~~~~~~ 120 (139)
.+|+++..++.+
T Consensus 71 ~~D~i~ggpPCQ 82 (376)
T 3g7u_A 71 PIDGIIGGPPCQ 82 (376)
T ss_dssp CCCEEEECCCCC
T ss_pred CeeEEEecCCCC
Confidence 699999998844
No 298
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.41 E-value=6e-05 Score=54.64 Aligned_cols=81 Identities=19% Similarity=0.087 Sum_probs=49.0
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhc
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMM 105 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 105 (139)
.++++++|||+|||.|.++..+++..+ ...++++|+...+...+... .. . ..++.....++. +. ..
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~-----~-g~~ii~~~~~~d--v~----~l 152 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TT-----L-GWNLIRFKDKTD--VF----NM 152 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CB-----T-TGGGEEEECSCC--GG----GS
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-cc-----C-CCceEEeeCCcc--hh----hc
Confidence 357888999999999999999997653 34788999874321111000 00 0 123333332211 11 12
Q ss_pred cCCceeEEecCcccc
Q psy5757 106 KFDRYDFLPHAPAES 120 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~ 120 (139)
+..++|+|+|..+.+
T Consensus 153 ~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 153 EVIPGDTLLCDIGES 167 (282)
T ss_dssp CCCCCSEEEECCCCC
T ss_pred CCCCcCEEEecCccC
Confidence 356799999998865
No 299
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.39 E-value=0.0005 Score=50.79 Aligned_cols=57 Identities=18% Similarity=0.205 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh
Q psy5757 14 SAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH 76 (139)
Q Consensus 14 ~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~ 76 (139)
..+.+++.... .++..|||..||+|.++.+..+... +.+++|+++..++.+++++..
T Consensus 240 ~l~~~~i~~~~---~~~~~VlDpF~GsGtt~~aa~~~gr---~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 240 KLPEFFIRMLT---EPDDLVVDIFGGSNTTGLVAERESR---KWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHHHHC---CTTCEEEETTCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHHHHhC---CCCCEEEECCCCCCHHHHHHHHcCC---CEEEEeCCHHHHHHHHHHHHh
Confidence 44556655543 7889999999999999998887764 999999999999999999876
No 300
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.38 E-value=0.00019 Score=53.50 Aligned_cols=76 Identities=18% Similarity=0.151 Sum_probs=54.7
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhH-HHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIE-TVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~~~~~ 108 (139)
..+++|+.||.|+++..+....-.-..++++|+++.+++..+.++. +..++.+|+.+... .+. ..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~----------~~~~~~~Di~~~~~~~~~----~~ 67 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP----------HTQLLAKTIEGITLEEFD----RL 67 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSCEECSCGGGCCHHHHH----HH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc----------ccccccCCHHHccHhHcC----cC
Confidence 3579999999999999998875211178999999999998888763 33467788765221 121 11
Q ss_pred ceeEEecCccc
Q psy5757 109 RYDFLPHAPAE 119 (139)
Q Consensus 109 ~~D~vi~~~~~ 119 (139)
.+|+++..++.
T Consensus 68 ~~D~l~~gpPC 78 (343)
T 1g55_A 68 SFDMILMSPPC 78 (343)
T ss_dssp CCSEEEECCC-
T ss_pred CcCEEEEcCCC
Confidence 58999999983
No 301
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.32 E-value=0.00085 Score=49.55 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=47.1
Q ss_pred hHHHHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCH---HHHHHHHHHHHh
Q psy5757 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVP---QLVNSSIQNILH 76 (139)
Q Consensus 13 ~~~~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~---~~~~~a~~~~~~ 76 (139)
...+.+++.... .++..|||..||+|.++.+..+... +.+++|+++ ..++.+++++..
T Consensus 229 ~~l~~~~i~~~~---~~~~~vlDpF~GsGtt~~aa~~~~r---~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 229 AAVIERLVRALS---HPGSTVLDFFAGSGVTARVAIQEGR---NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHHHHS---CTTCEEEETTCTTCHHHHHHHHHTC---EEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhC---CCCCEEEecCCCCCHHHHHHHHcCC---cEEEEECCccHHHHHHHHHHHHHH
Confidence 344556665553 7889999999999999999988875 999999999 999999999876
No 302
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.31 E-value=0.00076 Score=51.40 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=42.5
Q ss_pred CCCCeEEEEcccCChhHHHHH-HHcCCCceEEEEeCCHHHHHHHHHHHHh
Q psy5757 28 NENSKVLEIGSGSGYLTNMIS-ELMNSTGQVIGIEHVPQLVNSSIQNILH 76 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~-~~~~~~~~v~~~d~~~~~~~~a~~~~~~ 76 (139)
+++..++|+||+.|..+..++ +..++.++|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 678899999999999999988 4454346999999999999999998875
No 303
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.29 E-value=7.5e-05 Score=53.54 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=28.0
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHH--cCC-CceEEEEe
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISEL--MNS-TGQVIGIE 61 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~--~~~-~~~v~~~d 61 (139)
.++++++|||+||+.|+++..+++. ... .+.++++|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D 108 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP 108 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc
Confidence 4688999999999999999999998 421 23455555
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.28 E-value=0.0016 Score=47.67 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=55.8
Q ss_pred hhhhhcccccChH-------HHHHHHHHhcc---cCCCCCeEEEEcccC----ChhHHHHHHHcCCC-ceEEEEeCCHHH
Q psy5757 2 NLVKIGAAIGGIS-------AILTYLSIIQP---HLNENSKVLEIGSGS----GYLTNMISELMNST-GQVIGIEHVPQL 66 (139)
Q Consensus 2 ~~~~~~~~~~~~~-------~~~~~~~~l~~---~~~~~~~iLdiG~G~----G~~~~~l~~~~~~~-~~v~~~d~~~~~ 66 (139)
|+.+||+.+.-|. ...++...+.. -++.+++|||+|+|+ .--+ .+++++.++ +.++++|+.+-
T Consensus 72 ~l~nyg~~~~lp~g~~~nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS-~VLr~~~p~g~~VVavDL~~~- 149 (344)
T 3r24_A 72 DLQNYGENAVIPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF- 149 (344)
T ss_dssp CCCCCSCCTTSCTTCCHHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-
T ss_pred ccccCCCCCCCCCCcEeeHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH-HHHHHhCCCCcEEEEeeCccc-
Confidence 4567777765544 12344444421 246789999999842 2222 344444565 69999999862
Q ss_pred HHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCcc
Q psy5757 67 VNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 67 ~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
.. ... .++++|... . ....+||+|+|..+
T Consensus 150 --------~s-------da~-~~IqGD~~~-~------~~~~k~DLVISDMA 178 (344)
T 3r24_A 150 --------VS-------DAD-STLIGDCAT-V------HTANKWDLIISDMY 178 (344)
T ss_dssp --------BC-------SSS-EEEESCGGG-E------EESSCEEEEEECCC
T ss_pred --------cc-------CCC-eEEEccccc-c------ccCCCCCEEEecCC
Confidence 11 123 458899543 1 12467999999876
No 305
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.24 E-value=0.00012 Score=52.00 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=52.4
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEc-cchhhhHHHhhh
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVAL-GMIKRIETVELM 104 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~ 104 (139)
.+++++.|+|+||++|+++.+++...+.. +|+|+|+-..-.+.= ...+. ++-..++|..+ |+..
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~-~V~avdvG~~ghe~P-~~~~s-----~gwn~v~fk~gvDv~~-------- 139 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVT-EVRGYTKGGPGHEEP-VPMST-----YGWNIVKLMSGKDVFY-------- 139 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEE-EEEEECCCSTTSCCC-CCCCC-----TTTTSEEEECSCCGGG--------
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCC-EEEEEecCCCCccCc-chhhh-----cCcCceEEEeccceee--------
Confidence 36788999999999999999999887543 899999864211000 00111 22267889888 8522
Q ss_pred ccCCceeEEecCcc
Q psy5757 105 MKFDRYDFLPHAPA 118 (139)
Q Consensus 105 ~~~~~~D~vi~~~~ 118 (139)
.+...+|+++|...
T Consensus 140 ~~~~~~DtllcDIg 153 (267)
T 3p8z_A 140 LPPEKCDTLLCDIG 153 (267)
T ss_dssp CCCCCCSEEEECCC
T ss_pred cCCccccEEEEecC
Confidence 12356899988765
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.13 E-value=0.0015 Score=48.41 Aligned_cols=74 Identities=11% Similarity=-0.059 Sum_probs=54.1
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCc
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDR 109 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~ 109 (139)
+.+++|+.||.|+++..+....-. .+.++|+++.+++..+.++.. .. ++|+.+... . ....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~--~v~~~e~d~~a~~t~~~N~~~----------~~--~~Di~~~~~----~-~~~~ 71 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAE--CVYSNEWDKYAQEVYEMNFGE----------KP--EGDITQVNE----K-TIPD 71 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCE--EEEEECCCHHHHHHHHHHHSC----------CC--BSCGGGSCG----G-GSCC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCe--EEEEEeCCHHHHHHHHHHcCC----------CC--cCCHHHcCH----h-hCCC
Confidence 468999999999999999887642 688999999998888887643 11 577655211 1 1235
Q ss_pred eeEEecCcccccc
Q psy5757 110 YDFLPHAPAESWM 122 (139)
Q Consensus 110 ~D~vi~~~~~~~~ 122 (139)
+|+++..++.+-+
T Consensus 72 ~D~l~~gpPCQ~f 84 (327)
T 2c7p_A 72 HDILCAGFPCQAF 84 (327)
T ss_dssp CSEEEEECCCTTT
T ss_pred CCEEEECCCCCCc
Confidence 8999999885543
No 307
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.81 E-value=0.0089 Score=43.64 Aligned_cols=80 Identities=9% Similarity=0.036 Sum_probs=56.4
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCce-EEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhH-HHhhhc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQ-VIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIE-TVELMM 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~-v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~~ 105 (139)
+...+++|+.||.|+++..+.+..- +.. +.++|+++.+.+..+.+. ++..++.+|+.+... .+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~----------~~~~~~~~DI~~i~~~~i~--- 79 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRH----------QGKIMYVGDVRSVTQKHIQ--- 79 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHT----------TTCEEEECCGGGCCHHHHH---
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhC----------CCCceeCCChHHccHHHhc---
Confidence 4556899999999999999988763 223 699999998877666553 344577888776222 221
Q ss_pred cCCceeEEecCccccc
Q psy5757 106 KFDRYDFLPHAPAESW 121 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~ 121 (139)
....+|+++..++.+-
T Consensus 80 ~~~~~Dll~ggpPCQ~ 95 (295)
T 2qrv_A 80 EWGPFDLVIGGSPCND 95 (295)
T ss_dssp HTCCCSEEEECCCCGG
T ss_pred ccCCcCEEEecCCCcc
Confidence 1246899999887443
No 308
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.79 E-value=0.0043 Score=45.49 Aligned_cols=72 Identities=17% Similarity=0.117 Sum_probs=52.5
Q ss_pred CeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCce
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDRY 110 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 110 (139)
++++|+-||-|+++..+-+..-. .+.++|+++.+.+.-+.+. + -+++.+|+.+ +. . .....+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~----------~-~~~~~~DI~~-i~---~-~~~~~~ 62 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNH----------S-AKLIKGDISK-IS---S-DEFPKC 62 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHC----------C-SEEEESCGGG-CC---G-GGSCCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHC----------C-CCcccCChhh-CC---H-hhCCcc
Confidence 57999999999999998876632 6789999998877766653 2 2467788655 21 1 123468
Q ss_pred eEEecCcccc
Q psy5757 111 DFLPHAPAES 120 (139)
Q Consensus 111 D~vi~~~~~~ 120 (139)
|+++..++.+
T Consensus 63 D~l~ggpPCQ 72 (331)
T 3ubt_Y 63 DGIIGGPPSQ 72 (331)
T ss_dssp SEEECCCCGG
T ss_pred cEEEecCCCC
Confidence 9999988744
No 309
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.58 E-value=0.0045 Score=45.95 Aligned_cols=76 Identities=16% Similarity=0.079 Sum_probs=53.0
Q ss_pred CeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhH-HHhhhccCCc
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIE-TVELMMKFDR 109 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~~~~~~ 109 (139)
.+++|+.||.|+++..+.+..-.--.+.++|+++.+.+.-+.++. ...++.+|+.+.-. .+ +...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~~DI~~~~~~~~----~~~~ 69 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP----------ETNLLNRNIQQLTPQVI----KKWN 69 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSCEECCCGGGCCHHHH----HHTT
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC----------CCceeccccccCCHHHh----ccCC
Confidence 479999999999999998875211268899999988887777653 33456778665211 12 1125
Q ss_pred eeEEecCcccc
Q psy5757 110 YDFLPHAPAES 120 (139)
Q Consensus 110 ~D~vi~~~~~~ 120 (139)
+|+++..++.+
T Consensus 70 ~D~l~ggpPCQ 80 (333)
T 4h0n_A 70 VDTILMSPPCQ 80 (333)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEecCCCc
Confidence 89999888744
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.47 E-value=0.0048 Score=45.72 Aligned_cols=80 Identities=13% Similarity=-0.014 Sum_probs=54.8
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceE-EEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhh-HHHhhhc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQV-IGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRI-ETVELMM 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v-~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~~ 105 (139)
....+++|+.||.|+++..+.+..-.--.+ .++|+++.+.+..+.++.. . ++.+|+.+.- ..+.
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~----------~-~~~~DI~~~~~~~i~--- 73 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE----------E-VQVKNLDSISIKQIE--- 73 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC----------C-CBCCCTTTCCHHHHH---
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC----------C-cccCChhhcCHHHhc---
Confidence 345689999999999999998875211156 7999999988887777633 1 4567765521 1221
Q ss_pred cCCceeEEecCcccccc
Q psy5757 106 KFDRYDFLPHAPAESWM 122 (139)
Q Consensus 106 ~~~~~D~vi~~~~~~~~ 122 (139)
...+|+++..++.+-+
T Consensus 74 -~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 74 -SLNCNTWFMSPPCQPY 89 (327)
T ss_dssp -HTCCCEEEECCCCTTC
T ss_pred -cCCCCEEEecCCccCc
Confidence 1258999988884433
No 311
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.30 E-value=0.0036 Score=45.78 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=31.8
Q ss_pred CCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCH
Q psy5757 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVP 64 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~ 64 (139)
++++..|||+||++|+++.+++...+.. +|+|+|+-.
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~-~V~avdvG~ 128 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQ-EVRGYTKGG 128 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEE-EEEEECCCS
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCC-EEEEEEcCC
Confidence 5788899999999999999888877543 899999864
No 312
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.06 E-value=0.01 Score=43.32 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=31.5
Q ss_pred cCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCH
Q psy5757 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVP 64 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~ 64 (139)
.++++++|||+||+.|+++..+++..+ -..|.++|+..
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~ 115 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGI 115 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecc
Confidence 467889999999999999999998653 23788999864
No 313
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.85 E-value=0.014 Score=45.46 Aligned_cols=80 Identities=11% Similarity=0.034 Sum_probs=54.7
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhH----------
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIE---------- 99 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---------- 99 (139)
..+++|+.||.|+++..+.+.... .+.++|+++.+.+.-+.++.. .++..++.+|+.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~--~v~avE~d~~A~~ty~~N~~~-------~p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQ--CVFTSEWNKHAVRTYKANHYC-------DPATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEE--EEEEECCCHHHHHHHHHHSCC-------CTTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHhccc-------CCCcceeccchhhhhhccccccchhh
Confidence 358999999999999999876532 689999999888777766532 1344567788665210
Q ss_pred ---HHhhhccCCceeEEecCcccc
Q psy5757 100 ---TVELMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 100 ---~~~~~~~~~~~D~vi~~~~~~ 120 (139)
.+. .....+|+++..++.+
T Consensus 159 ~~~~i~--~~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 159 AAEHIR--QHIPEHDVLLAGFPCQ 180 (482)
T ss_dssp HHHHHH--HHSCCCSEEEEECCCC
T ss_pred HHhhhh--hcCCCCCEEEecCCCc
Confidence 000 1124589999888744
No 314
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.71 E-value=0.11 Score=42.51 Aligned_cols=46 Identities=13% Similarity=0.071 Sum_probs=35.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCC---C-ceEEEEeCCHHHHHHHHHHH
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNS---T-GQVIGIEHVPQLVNSSIQNI 74 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~---~-~~v~~~d~~~~~~~~a~~~~ 74 (139)
+..+++|+.||-|+++..+.+.... . -.+.++|+++.+++--+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3458999999999999988776410 0 06789999999888777765
No 315
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.49 E-value=0.48 Score=33.63 Aligned_cols=83 Identities=20% Similarity=0.311 Sum_probs=54.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--h
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE--L 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~--~ 103 (139)
+++.+|-=|+++| .+..+++.+ ...++|+.+|.+++.++.+.+.+... -.++..+..|+.+. .+++. .
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~------g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM------GKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4567776665554 455555544 22459999999999988888777661 14688888998862 22221 1
Q ss_pred hccCCceeEEecCcc
Q psy5757 104 MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~ 118 (139)
...++++|+++.|.-
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 224578999998875
No 316
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.20 E-value=0.21 Score=42.23 Aligned_cols=80 Identities=15% Similarity=0.051 Sum_probs=53.6
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhh------
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVEL------ 103 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~------ 103 (139)
..+++|+.||.|+++..+.+..-. -.+.++|+++.+.+.-+.+. ++..++.+|+.+.......
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~----------p~~~~~~~DI~~l~~~~~~~di~~~ 608 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNN----------PGSTVFTEDCNILLKLVMAGETTNS 608 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHC----------TTSEEECSCHHHHHHHHHHTCSBCT
T ss_pred CCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhC----------CCCccccccHHHHhhhccchhhhhh
Confidence 348999999999999999887631 16889999998887666653 4556777775442111100
Q ss_pred ---hc-cCCceeEEecCcccc
Q psy5757 104 ---MM-KFDRYDFLPHAPAES 120 (139)
Q Consensus 104 ---~~-~~~~~D~vi~~~~~~ 120 (139)
.. ..+.+|+++..++-+
T Consensus 609 ~~~~lp~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 609 RGQRLPQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp TCCBCCCTTTCSEEEECCCCT
T ss_pred hhhhcccCCCeeEEEEcCCCc
Confidence 01 123589999888744
No 317
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.89 E-value=0.41 Score=36.20 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=33.2
Q ss_pred CeEEEEcccCChhHHHHHHHcC------CCceEEEEeCCHHHHHHHHHHH
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN------STGQVIGIEHVPQLVNSSIQNI 74 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~------~~~~v~~~d~~~~~~~~a~~~~ 74 (139)
-.|+|+|+|+|.+..-+.+... ...+++.+|+|+...+.=++.+
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 3699999999999888876542 2348999999987766444444
No 318
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.80 E-value=0.52 Score=36.33 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=60.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 16 ~~~~~~~l~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
+......+...-++-++++-+| .|..+..+++.+....++.-+|.+++.++.+.+.+ ++..+++||++
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~G--gG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l----------~~~~Vi~GD~t 288 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVG--GGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL----------ENTIVFCGDAA 288 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEEC--CSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC----------TTSEEEESCTT
T ss_pred HHHHHHhhccccccccEEEEEc--chHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC----------CCceEEecccc
Confidence 5555555543334556787765 56677888888866679999999998888776654 66789999988
Q ss_pred hhhHHHhhhccCCceeEEecCc
Q psy5757 96 KRIETVELMMKFDRYDFLPHAP 117 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~ 117 (139)
+ ..-+ .++.-+..|++++.-
T Consensus 289 d-~~~L-~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 289 D-QELL-TEENIDQVDVFIALT 308 (461)
T ss_dssp C-HHHH-HHTTGGGCSEEEECC
T ss_pred c-hhhH-hhcCchhhcEEEEcc
Confidence 7 2222 333456678887643
No 319
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.73 E-value=1.1 Score=32.96 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=59.8
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hc-cccc--------------cCCcEEEEE
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SN-ARLL--------------TDGHIKFVA 91 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~-~~~~--------------~~~~i~~~~ 91 (139)
.+...|+.+|||.......+....+ ..+++-+|. |+.++.-++.+.. +. +..+ ..++.+++.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 3557899999999999999887653 345555555 6777777766655 21 0001 126789999
Q ss_pred ccchh-hh-HHHhhhc-cCCceeEEecCcccccccc
Q psy5757 92 LGMIK-RI-ETVELMM-KFDRYDFLPHAPAESWMNI 124 (139)
Q Consensus 92 ~d~~~-~~-~~~~~~~-~~~~~D~vi~~~~~~~~~~ 124 (139)
.|+.+ .+ ..+.... ..+...++++=.+++++..
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~ 209 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHN 209 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCH
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCH
Confidence 99886 22 2221122 2245677777777776653
No 320
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.68 E-value=0.61 Score=29.27 Aligned_cols=73 Identities=7% Similarity=0.009 Sum_probs=45.1
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
.++++-+|+ |..+..+++.+. ...+|+.+|.+++.++.+++ ..+.++.+|..+ ...+ .....+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~------------~~~~~~~gd~~~-~~~l-~~~~~~ 69 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED------------EGFDAVIADPTD-ESFY-RSLDLE 69 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------------TTCEEEECCTTC-HHHH-HHSCCT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH------------CCCcEEECCCCC-HHHH-HhCCcc
Confidence 357888887 556776666552 13389999999887665543 235677788765 2222 122334
Q ss_pred ceeEEecCcc
Q psy5757 109 RYDFLPHAPA 118 (139)
Q Consensus 109 ~~D~vi~~~~ 118 (139)
.+|+++....
T Consensus 70 ~~d~vi~~~~ 79 (141)
T 3llv_A 70 GVSAVLITGS 79 (141)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEEecC
Confidence 6788776554
No 321
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=93.60 E-value=0.015 Score=53.33 Aligned_cols=97 Identities=18% Similarity=0.136 Sum_probs=48.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCC----CceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNS----TGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVEL 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~----~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 103 (139)
.+..+|||+|+|+|..+..+.+.... ..+.+..|+++...+.++++++. -+++.-..|..+ . .
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~--------~di~~~~~d~~~-~----~ 1305 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ--------LHVTQGQWDPAN-P----A 1305 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH--------HTEEEECCCSSC-C----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh--------cccccccccccc-c----c
Confidence 34679999999999988887776542 13677889998877777776644 112221112111 0 0
Q ss_pred hccCCceeEEecCcccccccc---ceeeeeeeccCCC
Q psy5757 104 MMKFDRYDFLPHAPAESWMNI---PVCINYTATMPEG 137 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~~~~~~---p~~~~~~~~~p~g 137 (139)
......||+|+...++|--.+ -+......++|+|
T Consensus 1306 ~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G 1342 (2512)
T 2vz8_A 1306 PGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGG 1342 (2512)
T ss_dssp C-----CCEEEEECC--------------------CC
T ss_pred cCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCc
Confidence 001245999999998884332 2333345566666
No 322
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.11 E-value=0.74 Score=32.13 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-cCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGS-GSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~-G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.|+ |+| .+..+++.+ ....+|+.++.+++.++.+.+.+.. ....++.++..|+.+. +..+..
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLAD-----LGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----TCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-----cCCCceEEEEeCCCCHHHHHHHHHH
Confidence 4667887776 444 344444433 1234899999998888777776655 1125789999998762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+++|++|.|...
T Consensus 95 ~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCcEEEECCCc
Confidence 1123578999998864
No 323
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.03 E-value=0.51 Score=34.53 Aligned_cols=81 Identities=15% Similarity=0.195 Sum_probs=52.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcCC--Cc-eEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMNS--TG-QVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELM 104 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~~--~~-~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 104 (139)
..+++||-.| |+|..+..+++.+-. .. +|++++.++.......+.+.. .++.++.+|+.+ ...+..-
T Consensus 19 ~~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~--------~~v~~~~~Dl~d-~~~l~~~ 88 (344)
T 2gn4_A 19 LDNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND--------PRMRFFIGDVRD-LERLNYA 88 (344)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC--------TTEEEEECCTTC-HHHHHHH
T ss_pred hCCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC--------CCEEEEECCCCC-HHHHHHH
Confidence 3457887655 678888888776522 22 899999987665554443322 578899999876 3332222
Q ss_pred ccCCceeEEecCcccc
Q psy5757 105 MKFDRYDFLPHAPAES 120 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~ 120 (139)
.+.+|+||.+....
T Consensus 89 --~~~~D~Vih~Aa~~ 102 (344)
T 2gn4_A 89 --LEGVDICIHAAALK 102 (344)
T ss_dssp --TTTCSEEEECCCCC
T ss_pred --HhcCCEEEECCCCC
Confidence 24589999887643
No 324
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.02 E-value=0.44 Score=30.15 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=43.4
Q ss_pred CeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCc
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDR 109 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~ 109 (139)
.+++-+|+ |..+..+++.+. ....++++|.+++.++.+++ ..+.++.+|..+ ...+ .......
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~------------~g~~~i~gd~~~-~~~l-~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE------------RGVRAVLGNAAN-EEIM-QLAHLEC 71 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------------TTCEEEESCTTS-HHHH-HHTTGGG
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------------cCCCEEECCCCC-HHHH-HhcCccc
Confidence 46777776 556666655542 13389999999988776653 245678888765 2212 1223345
Q ss_pred eeEEecCc
Q psy5757 110 YDFLPHAP 117 (139)
Q Consensus 110 ~D~vi~~~ 117 (139)
.|+++...
T Consensus 72 ad~vi~~~ 79 (140)
T 3fwz_A 72 AKWLILTI 79 (140)
T ss_dssp CSEEEECC
T ss_pred CCEEEEEC
Confidence 78777544
No 325
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.94 E-value=0.15 Score=41.08 Aligned_cols=87 Identities=14% Similarity=-0.029 Sum_probs=51.3
Q ss_pred CCeEEEEcccCChhHHHHHHHcC------C-----CceEEEEeC---CHHHHHHHHH-----------HHHhhc------
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN------S-----TGQVIGIEH---VPQLVNSSIQ-----------NILHSN------ 78 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~------~-----~~~v~~~d~---~~~~~~~a~~-----------~~~~~~------ 78 (139)
.-+|+|+|.|+|.....+.+.+. | ..+++.+|. +.+.+..+-. .+..+-
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 34899999999998888877541 1 257899998 4444443221 111100
Q ss_pred -cccccC--CcEEEEEccchhhhHHHhhhccCCceeEEecCc
Q psy5757 79 -ARLLTD--GHIKFVALGMIKRIETVELMMKFDRYDFLPHAP 117 (139)
Q Consensus 79 -~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~ 117 (139)
|..+.. -++++..+|+.+.++++... ...++|.++...
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~-~~~~~da~flD~ 179 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDS-LNNQVDAWFLDG 179 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGG-GTTCEEEEEECS
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccc-cCCceeEEEECC
Confidence 111211 25678889987766543211 135799998854
No 326
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.90 E-value=0.95 Score=31.72 Aligned_cols=87 Identities=8% Similarity=0.014 Sum_probs=55.3
Q ss_pred CCCCeEEEEcccCC-hhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh-
Q psy5757 28 NENSKVLEIGSGSG-YLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE- 102 (139)
Q Consensus 28 ~~~~~iLdiG~G~G-~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~- 102 (139)
.+++.+|--|++++ +.+..+++.+ ...++|+..+.+++..+.+.+.+.. ....++.++..|+.+. ..++.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ-----LNQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGG-----GTCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----cCCCcEEEEEccCCCHHHHHHHHH
Confidence 46788888886442 4455555443 1234899999998888888777766 1125788888888762 11111
Q ss_pred -hhccCCceeEEecCccc
Q psy5757 103 -LMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 -~~~~~~~~D~vi~~~~~ 119 (139)
....++++|+++.|...
T Consensus 79 ~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHHCCCSEEEECCCC
T ss_pred HHHHHhCCCCEEEecccc
Confidence 11235689999988653
No 327
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.79 E-value=1.7 Score=30.33 Aligned_cols=84 Identities=10% Similarity=0.147 Sum_probs=53.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
..++.+|--|++.| .+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+.
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT------GRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 35677887776554 445554444 12348999999988887777666551 14788888898762 22211
Q ss_pred hhccCCceeEEecCcc
Q psy5757 103 LMMKFDRYDFLPHAPA 118 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~ 118 (139)
....++.+|+++.|..
T Consensus 82 ~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHHcCCCcEEEECCC
Confidence 1123467999999874
No 328
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.77 E-value=2.2 Score=31.44 Aligned_cols=46 Identities=15% Similarity=0.302 Sum_probs=36.0
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH
Confidence 367899999999875 6777788877652 269999999988887754
No 329
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=92.68 E-value=1.1 Score=33.49 Aligned_cols=88 Identities=16% Similarity=0.221 Sum_probs=55.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCC--ceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNST--GQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~--~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.+++||-.| |+|..+..+++.+-.. .+|++++.++.......+.+.... .....+++++.+|+.+. ..+..-..
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~v~~~~~Dl~d~-~~~~~~~~ 109 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSF--GYINGDFQTFALDIGSI-EYDAFIKA 109 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHT--CCCSSEEEEECCCTTSH-HHHHHHHH
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhc--CCCCCcEEEEEEeCCCH-HHHHHHHH
Confidence 357787765 5788888888876322 389999999887776655554310 01125788999998762 22211112
Q ss_pred CCceeEEecCcccc
Q psy5757 107 FDRYDFLPHAPAES 120 (139)
Q Consensus 107 ~~~~D~vi~~~~~~ 120 (139)
...+|+|+.+....
T Consensus 110 ~~~~D~Vih~Aa~~ 123 (399)
T 3nzo_A 110 DGQYDYVLNLSALK 123 (399)
T ss_dssp CCCCSEEEECCCCC
T ss_pred hCCCCEEEECCCcC
Confidence 34689999877643
No 330
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.39 E-value=1.1 Score=31.21 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=52.5
Q ss_pred CCCCeEEEEccc-CChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh
Q psy5757 28 NENSKVLEIGSG-SGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL 103 (139)
Q Consensus 28 ~~~~~iLdiG~G-~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~ 103 (139)
.+++++|-.|++ +|..+..+++.+. ...+|+.++.++...+.+++.... ..++.++..|+.+. +..+..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-------FGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-------TTCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH-------cCCcEEEECCCCCHHHHHHHHH
Confidence 567788888874 3666666666552 234899998886555544444333 13567888888762 222111
Q ss_pred --hccCCceeEEecCcccc
Q psy5757 104 --MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 104 --~~~~~~~D~vi~~~~~~ 120 (139)
....+.+|++|.|....
T Consensus 85 ~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp HHHHHCSCEEEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCccC
Confidence 11345799999987643
No 331
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.33 E-value=0.14 Score=39.26 Aligned_cols=46 Identities=15% Similarity=0.248 Sum_probs=35.1
Q ss_pred CCeEEEEcccCChhHHHHHHHcC----CCceEEEEeCCHHHHHHHHHHHH
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN----STGQVIGIEHVPQLVNSSIQNIL 75 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~----~~~~v~~~d~~~~~~~~a~~~~~ 75 (139)
.-.|+|+|+|+|.+..-+.+.+. ...+++-+|+|+.+.+.=++.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 46899999999998888876552 12379999999887766666554
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.31 E-value=2.5 Score=31.07 Aligned_cols=45 Identities=18% Similarity=0.311 Sum_probs=35.3
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++.+||-+|+|. |..+..+++..+ +++++++.+++.++.+++
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHH
Confidence 367899999999764 667777777765 399999999888877655
No 333
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.30 E-value=0.66 Score=32.89 Aligned_cols=86 Identities=19% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
.+++.+|--|+ +++.+..+++.+ ...++|+..|.+++.++.+.+.+... -.++..+..|+.+. .+.+.
T Consensus 7 L~gKvalVTGa-s~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~------g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 7 LTGKTALVTGS-ARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK------GYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp CTTCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT------TCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHHHH
Confidence 35666666554 455566666655 22459999999999888877777651 14677888888762 22221
Q ss_pred hhccCCceeEEecCcccc
Q psy5757 103 LMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~~ 120 (139)
....++++|+++.|.-..
T Consensus 80 ~~~~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQ 97 (255)
T ss_dssp HHHTTCCCCEEEECCCCC
T ss_pred HHHHCCCCcEEEECCCCC
Confidence 122467899999988643
No 334
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=92.30 E-value=1.2 Score=31.28 Aligned_cols=83 Identities=17% Similarity=0.163 Sum_probs=52.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhhh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVELM 104 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~~ 104 (139)
.++.+|--| |+|..+..+++.+ ....+|+.++.+++.++.+.+.+.. .. ..++.++..|..+. +..+..
T Consensus 9 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~~- 81 (267)
T 3t4x_A 9 KGKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-----DAILQPVVADLGTEQGCQDVIE- 81 (267)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-----TCEEEEEECCTTSHHHHHHHHH-
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----CceEEEEecCCCCHHHHHHHHH-
Confidence 456777665 4566666666655 2234899999998877776666554 21 24677788887752 222222
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
..+.+|+++.|...
T Consensus 82 -~~g~id~lv~nAg~ 95 (267)
T 3t4x_A 82 -KYPKVDILINNLGI 95 (267)
T ss_dssp -HCCCCSEEEECCCC
T ss_pred -hcCCCCEEEECCCC
Confidence 34679999988763
No 335
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.26 E-value=1.1 Score=26.76 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=45.4
Q ss_pred CCeEEEEcccCChhHHHHHHHcCC-C-ceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNS-T-GQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKF 107 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~-~-~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 107 (139)
.++|+-+|+ |..+..+++.+.. . .+++.++.+++..+.+. . .++.++..|..+ ...+... .
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--------~~~~~~~~d~~~-~~~~~~~--~ 67 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--------MGVATKQVDAKD-EAGLAKA--L 67 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--------TTCEEEECCTTC-HHHHHHH--T
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--------CCCcEEEecCCC-HHHHHHH--H
Confidence 467888887 7777776665521 2 48999999987665543 2 345567777654 2222211 2
Q ss_pred CceeEEecCccc
Q psy5757 108 DRYDFLPHAPAE 119 (139)
Q Consensus 108 ~~~D~vi~~~~~ 119 (139)
..+|+|+.....
T Consensus 68 ~~~d~vi~~~~~ 79 (118)
T 3ic5_A 68 GGFDAVISAAPF 79 (118)
T ss_dssp TTCSEEEECSCG
T ss_pred cCCCEEEECCCc
Confidence 458998877653
No 336
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.20 E-value=1.2 Score=31.22 Aligned_cols=85 Identities=13% Similarity=0.188 Sum_probs=53.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+.. ....++.++..|+.+. +..+..
T Consensus 9 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 9 QGRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-----LGSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----TSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----hCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 456666655 45666666666552 234899999998888777766655 1125788899998762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 83 ~~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 83 VEEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1123579999988763
No 337
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=92.16 E-value=0.95 Score=32.04 Aligned_cols=84 Identities=10% Similarity=0.116 Sum_probs=54.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh---hHHHhh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR---IETVEL 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~---~~~~~~ 103 (139)
.++.+|-.|+ +|+.+..+++.+ ....+|+.++.++...+.+.+.+.. + ..++.++..|+.+. +..+..
T Consensus 11 ~~k~vlITGa-s~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGG-NKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN------HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CCceEEEEccCCCcHHHHHHHHH
Confidence 4566776654 566666666655 2244999999998887777776655 2 25788999888763 122111
Q ss_pred --hccCCceeEEecCccc
Q psy5757 104 --MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 --~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 84 ~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHhCCCCCEEEECCcc
Confidence 1123579999999864
No 338
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=92.15 E-value=1.5 Score=30.47 Aligned_cols=85 Identities=11% Similarity=0.122 Sum_probs=52.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
..++.+|--|+ +|..+..+++.+- ...+|+.++.+++..+.+.+.+... ..++.++..|+.+. +..+..
T Consensus 10 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 10 LNDAVAIVTGA-AAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA------GGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CTTCEEEECSC-SSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHH
Confidence 35567776665 4555555555441 1238999999988877776666551 15788888888762 121111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 83 ~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1123578999998764
No 339
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=92.05 E-value=0.15 Score=37.42 Aligned_cols=103 Identities=18% Similarity=0.179 Sum_probs=53.0
Q ss_pred CeEEEEcccCChhHHHHHH---HcCCCc--eEEEEeCCH--------HHHHHHHHHHHhhccccccCC--cEEEEEccch
Q psy5757 31 SKVLEIGSGSGYLTNMISE---LMNSTG--QVIGIEHVP--------QLVNSSIQNILHSNARLLTDG--HIKFVALGMI 95 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~---~~~~~~--~v~~~d~~~--------~~~~~a~~~~~~~~~~~~~~~--~i~~~~~d~~ 95 (139)
-+|+|+|-|+|........ ...+.. +.+.+|..+ +......+.+..... ++... .+++..+|+.
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p-~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVP-EYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCS-EEECSSEEEEEEESCHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCc-cccCCcEEEEEEechHH
Confidence 4799999999986554432 233444 456777421 111222221211000 01123 3567789977
Q ss_pred hhhHHHhhhccCCceeEEecCcc------ccccccceeeeeeeccCCCC
Q psy5757 96 KRIETVELMMKFDRYDFLPHAPA------ESWMNIPVCINYTATMPEGS 138 (139)
Q Consensus 96 ~~~~~~~~~~~~~~~D~vi~~~~------~~~~~~p~~~~~~~~~p~g~ 138 (139)
+.++++ ...++|+++...- -.|-.+.....++...|+|.
T Consensus 177 ~~l~~l----~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~ 221 (308)
T 3vyw_A 177 KRIKEV----ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGY 221 (308)
T ss_dssp HHGGGC----CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEE
T ss_pred HHHhhh----cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcE
Confidence 655543 2346999987651 22333334445566666553
No 340
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=91.91 E-value=1.3 Score=32.84 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=45.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
..++|+-+|| |..+..+++.+.....++..|.+...++.+++ .+..+..|+.+ ...+... ..
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~-------------~~~~~~~d~~d-~~~l~~~--~~ 76 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE-------------FATPLKVDASN-FDKLVEV--MK 76 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT-------------TSEEEECCTTC-HHHHHHH--HT
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc-------------cCCcEEEecCC-HHHHHHH--Hh
Confidence 4578999988 77777777777555689999999776655422 33445556554 2322221 23
Q ss_pred ceeEEecCcc
Q psy5757 109 RYDFLPHAPA 118 (139)
Q Consensus 109 ~~D~vi~~~~ 118 (139)
..|+|++..+
T Consensus 77 ~~DvVi~~~p 86 (365)
T 3abi_A 77 EFELVIGALP 86 (365)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEEecC
Confidence 4788887665
No 341
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.89 E-value=1.1 Score=31.20 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=53.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|++ |..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA------GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECcCCCHHHHHHHHHHH
Confidence 45677776655 55555655554 12348999999988887777766551 15788889998762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
... +.+|+++.|...
T Consensus 79 ~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHH-SCEEEEEECCCC
T ss_pred Hhh-CCceEEEECCCc
Confidence 112 579999998864
No 342
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.86 E-value=2.5 Score=30.88 Aligned_cols=45 Identities=13% Similarity=0.323 Sum_probs=34.5
Q ss_pred CCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
++++.+||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGA-GRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTC-SSEEEECCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECCCHHHHHHHHH
Confidence 68899999999763 6667777776542 279999999888777765
No 343
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.67 E-value=1.5 Score=31.37 Aligned_cols=82 Identities=12% Similarity=0.102 Sum_probs=51.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
.+++.+|--|+++| .+..+++.+ ...++|+..+.+++.++.+.+.+. .+...+..|+.+. .+++.
T Consensus 27 L~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---------~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 27 LNAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---------GGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp TTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTCEEEECCTTCHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------CCeEEEEecCCCHHHHHHHHHH
Confidence 35667777665554 555555554 224599999999988877655542 3556777887752 22221
Q ss_pred hhccCCceeEEecCccc
Q psy5757 103 LMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~ 119 (139)
....++++|+++.|.-.
T Consensus 97 ~~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHHSCEEEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11235789999988753
No 344
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.56 E-value=2.9 Score=30.20 Aligned_cols=85 Identities=9% Similarity=0.088 Sum_probs=54.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|--|++ |+.+..+++.+ ....+|+.++.+++.++.+.+.+.. +. ..++.++..|+.+. +..+..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-----GPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEEECCCCCHHHHHHHHHH
Confidence 45678777765 55555555544 2234899999999888877766654 21 13788899998762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 81 ~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHTCCEEEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 1124578999999864
No 345
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=91.51 E-value=2 Score=29.75 Aligned_cols=87 Identities=17% Similarity=0.142 Sum_probs=52.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|++ |..+..+++.+. ...+|+.++.+++.++.+.+.+.... -...++.++..|+.+. +..+..
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN---KHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC---TTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---cccCcceEEeccCCCHHHHHHHHHHH
Confidence 45677776655 455555554441 12389999999888877766665410 0125678888888762 111111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 82 ~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1123579999988864
No 346
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.30 E-value=0.83 Score=36.62 Aligned_cols=86 Identities=13% Similarity=-0.026 Sum_probs=51.3
Q ss_pred CeEEEEcccCChhHHHHHHHcC-----------CCceEEEEeC---CHHHHHHHHH-----------HHHhhc-------
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN-----------STGQVIGIEH---VPQLVNSSIQ-----------NILHSN------- 78 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~-----------~~~~v~~~d~---~~~~~~~a~~-----------~~~~~~------- 78 (139)
-+|+|+|-|+|.......+.+. .+.+++++|. +++.+..+-. .+..+.
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 4899999999998877766541 1246899998 7666663322 111110
Q ss_pred cccccC--CcEEEEEccchhhhHHHhhhccCCceeEEecCc
Q psy5757 79 ARLLTD--GHIKFVALGMIKRIETVELMMKFDRYDFLPHAP 117 (139)
Q Consensus 79 ~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~ 117 (139)
+..+.. -.+++..+|+.+.++++... ...++|+++...
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~-~~~~~d~~~~D~ 187 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDS-LNQKVDAWFLDG 187 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGG-GTTCEEEEEECC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccc-cCCcccEEEECC
Confidence 000111 34567788977766543211 135699998854
No 347
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=91.28 E-value=1.5 Score=30.73 Aligned_cols=85 Identities=9% Similarity=0.105 Sum_probs=53.1
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--| |+|..+..+++.+- ...+|+.++.+++.++.+.+.+.... ..++.++..|+.+. +..+..
T Consensus 19 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 19 DGKRALITG-ATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-----GTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 456666655 45566666666552 23489999999888877766654411 25788888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 93 ~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHTSCSEEEEECCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1123578999988763
No 348
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.26 E-value=0.68 Score=40.36 Aligned_cols=81 Identities=14% Similarity=0.038 Sum_probs=53.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHh------
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVE------ 102 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~------ 102 (139)
...+++|+.||.|+++..+.+..- .-.+.++|+++.+++.-+.+. ++..++.+|+.+......
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~-~~vv~avEid~~A~~ty~~N~----------p~~~~~~~DI~~l~~~~~~gdi~~ 918 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGI-SETLWAIEMWDPAAQAFRLNN----------PGTTVFTEDCNVLLKLVMAGEVTN 918 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTS-EEEEEEECCSHHHHHHHHHHC----------TTSEEECSCHHHHHHHHTTTCSBC
T ss_pred CCceEEecccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhC----------CCCcEeeccHHHHhHhhhccchhh
Confidence 346899999999999999887652 116889999998887766653 344566777554221110
Q ss_pred ---hhcc-CCceeEEecCcccc
Q psy5757 103 ---LMMK-FDRYDFLPHAPAES 120 (139)
Q Consensus 103 ---~~~~-~~~~D~vi~~~~~~ 120 (139)
...+ .+.+|+++..++.+
T Consensus 919 ~~~~~lp~~~~vDvl~GGpPCQ 940 (1330)
T 3av4_A 919 SLGQRLPQKGDVEMLCGGPPCQ 940 (1330)
T ss_dssp SSCCBCCCTTTCSEEEECCCCT
T ss_pred hhhhhccccCccceEEecCCCc
Confidence 0001 13589999888744
No 349
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.26 E-value=2.2 Score=29.70 Aligned_cols=81 Identities=9% Similarity=0.053 Sum_probs=50.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++...+.+. .++.++..|+.+. +..+..
T Consensus 7 ~gk~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 7 QGKKAIVIGG-THGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHHHHH
Confidence 4567777765 455566665554 223489999999877766555441 4678888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 77 GQTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHHSSEEEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1124579999988753
No 350
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.26 E-value=1.4 Score=30.75 Aligned_cols=84 Identities=19% Similarity=0.215 Sum_probs=53.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
+++.+|-.| |+|..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 5 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 5 KEKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF------PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS------TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 456676655 4566666666655 22348999999988887777666441 14788888898762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 78 ~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 78 DEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123578999988763
No 351
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=91.22 E-value=3 Score=29.69 Aligned_cols=91 Identities=9% Similarity=-0.023 Sum_probs=55.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHH---c---CCCceEEEEe-----CCHH-------------------HHHHHHHHHH--
Q psy5757 28 NENSKVLEIGSGSGYLTNMISEL---M---NSTGQVIGIE-----HVPQ-------------------LVNSSIQNIL-- 75 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~---~---~~~~~v~~~d-----~~~~-------------------~~~~a~~~~~-- 75 (139)
.-...|+|+|+-.|..+..++.. . .+..+++++| ..+. ..+..++.+.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 33458999999999988886653 1 2456999999 2210 0111222111
Q ss_pred -hhccccccCCcEEEEEccchhhhHHHhhhccCCceeEEecCcc
Q psy5757 76 -HSNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPA 118 (139)
Q Consensus 76 -~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~vi~~~~ 118 (139)
...+.....++++++.|++.+.++.+....+..++|+++....
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D 191 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD 191 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc
Confidence 0000011137899999998887765533344567999988775
No 352
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.20 E-value=1.1 Score=34.58 Aligned_cols=72 Identities=10% Similarity=0.129 Sum_probs=49.1
Q ss_pred CCeEEEEcccCChhHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNS-TGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~-~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
.|+|+-+| .|..+..+++.+.. .-.|+.+|.+++.++.+.+.+ .+..++||+.+ ..-+ ..+.-+
T Consensus 3 ~M~iiI~G--~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----------~~~~i~Gd~~~-~~~L-~~Agi~ 67 (461)
T 4g65_A 3 AMKIIILG--AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----------DLRVVNGHASH-PDVL-HEAGAQ 67 (461)
T ss_dssp CEEEEEEC--CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----------SCEEEESCTTC-HHHH-HHHTTT
T ss_pred cCEEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----------CcEEEEEcCCC-HHHH-HhcCCC
Confidence 46777655 56788888888743 337999999999888776543 45678899876 2222 233455
Q ss_pred ceeEEecC
Q psy5757 109 RYDFLPHA 116 (139)
Q Consensus 109 ~~D~vi~~ 116 (139)
..|++++.
T Consensus 68 ~ad~~ia~ 75 (461)
T 4g65_A 68 DADMLVAV 75 (461)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEE
Confidence 67877653
No 353
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.17 E-value=2.7 Score=30.79 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=36.6
Q ss_pred CCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQN 73 (139)
Q Consensus 27 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~ 73 (139)
++++++||-+|+|. |..+..+++..+. ..|++++.+++..+.+++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh
Confidence 68899999999863 6677777777653 1499999999999988876
No 354
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.07 E-value=1.8 Score=29.73 Aligned_cols=80 Identities=14% Similarity=0.090 Sum_probs=50.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhh
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELM 104 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~ 104 (139)
.+++++|-.|+ +|..+..+++.+. ...+|+.++.+++.++...+.+. .++.+...|..+. +.++..
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~- 80 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---------DNYTIEVCNLANKEECSNLIS- 80 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------SSEEEEECCTTSHHHHHHHHH-
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---------cCccEEEcCCCCHHHHHHHHH-
Confidence 46677876665 5666666666552 23489999999877766554432 4677888887752 222211
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
..+.+|+++.|...
T Consensus 81 -~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 81 -KTSNLDILVCNAGI 94 (249)
T ss_dssp -TCSCCSEEEECCC-
T ss_pred -hcCCCCEEEECCCC
Confidence 23569999988763
No 355
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.03 E-value=1.6 Score=31.72 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=36.8
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-.|+|. |..+..+++..+. +|++++.+++..+.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL--RVAAVDIDDAKLNLARR 208 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHH
Confidence 367899999999874 7788888887754 99999999988887755
No 356
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.02 E-value=3 Score=29.70 Aligned_cols=86 Identities=16% Similarity=0.068 Sum_probs=51.2
Q ss_pred CCCCeEEEEcccCC-hhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh
Q psy5757 28 NENSKVLEIGSGSG-YLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G-~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~ 103 (139)
..++.+|--|+++| +.+..+++.+ ....+|+.++.++...+.+++.... ..++.++..|+.+. +..+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE-------LGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH-------HTCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-------cCCceEEECCCCCHHHHHHHHH
Confidence 45678888887643 3555555444 1234899999886655555444433 14577888888762 222211
Q ss_pred --hccCCceeEEecCcccc
Q psy5757 104 --MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 104 --~~~~~~~D~vi~~~~~~ 120 (139)
...++.+|++|.|....
T Consensus 102 ~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHHHHTSCCSEEEECCCCC
T ss_pred HHHHhcCCCCEEEECCccC
Confidence 12346799999887643
No 357
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.02 E-value=2.2 Score=30.13 Aligned_cols=84 Identities=8% Similarity=0.124 Sum_probs=52.1
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 23 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGV-SSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA------GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4567777664 555666665554 12348999999988887776666551 14688888898762 121111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 96 ~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 96 VERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHCSCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCC
Confidence 1123578999988764
No 358
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.01 E-value=1.7 Score=30.30 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=54.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--h
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE--L 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~--~ 103 (139)
.++.+|-.| |+|..+..+++.+ ....+|+.++.+++.++...+.+... ..++.++..|+.+. +..+. .
T Consensus 28 ~~k~vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 28 SGQVAVVTG-ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA------GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh------CCceeEEEecCCCHHHHHHHHHHH
Confidence 456777666 4566777776655 22348999999988887777766551 15688888888762 22111 1
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+++|++|.+...
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1123578999998765
No 359
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=90.95 E-value=3 Score=29.31 Aligned_cols=84 Identities=11% Similarity=0.115 Sum_probs=53.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+++..+.+.+.+.... ..++.++..|+.+. +..+..
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 26 RDKVAFITGG-GSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-----GRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4567777665 566666666655 234589999999877766665554311 25788888998762 111111
Q ss_pred hccCCceeEEecCcc
Q psy5757 104 MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~ 118 (139)
....+.+|+++.|..
T Consensus 100 ~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 100 LKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 112357999999886
No 360
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.84 E-value=2.6 Score=29.37 Aligned_cols=87 Identities=6% Similarity=0.017 Sum_probs=53.3
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
..++.+|--|++ +..+..+++.+ ....+|+.++.+++.++.+.+.+.... ...++.++..|+.+. ...+..
T Consensus 6 l~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF----PGARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc----CCceEEEEeCCCCCHHHHHHHHHH
Confidence 345677777655 55555555544 123489999999888877766664410 123588888888762 122111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 81 ~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHCSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1123578999998864
No 361
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.82 E-value=1.5 Score=30.29 Aligned_cols=84 Identities=18% Similarity=0.234 Sum_probs=53.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+- ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD------GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4567777765 5566666666552 2348999999988888777666551 15678888898762 122111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1123478999998754
No 362
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=90.78 E-value=2.8 Score=29.80 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=53.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc----CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM----NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE 102 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~----~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~ 102 (139)
.++.+|-.|++ |..+..+++.+ ....+|+..+.+++.++.+.+.+.... ...++.++..|+.+. +..+.
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~d~~~v~~~~ 106 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF----PNAKVHVAQLDITQAEKIKPFI 106 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC----TTCEEEEEECCTTCGGGHHHHH
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC----CCCeEEEEECCCCCHHHHHHHH
Confidence 35677777754 55566665544 212389999999888877766665410 025688888888762 22221
Q ss_pred hh--ccCCceeEEecCccc
Q psy5757 103 LM--MKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 ~~--~~~~~~D~vi~~~~~ 119 (139)
.. ...+.+|++|.|...
T Consensus 107 ~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 107 ENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp HTSCGGGCSCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCc
Confidence 11 123579999998764
No 363
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.75 E-value=2.3 Score=29.10 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=53.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--h
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE--L 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~--~ 103 (139)
.++.+|-.| |+|..+..+++.+- ...+|+.++.++...+...+.+... ..++.++..|+.+. +..+. .
T Consensus 4 ~~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 4 NEKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK------GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHHH
Confidence 356677666 45666666666552 2348999999988887777666551 14688888888762 22211 1
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+++|+++.|...
T Consensus 77 ~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 77 KAENLAIDILVNNAGI 92 (247)
T ss_dssp HHTTCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1234578999998764
No 364
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.73 E-value=1.2 Score=32.37 Aligned_cols=45 Identities=20% Similarity=0.333 Sum_probs=35.9
Q ss_pred cCCCCCeEEEEccc--CChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSG--SGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G--~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-.|+| .|..+..+++..+. +|++++.+++.++.+++
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNF--RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 36889999999987 56777777777653 99999999887777765
No 365
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=90.65 E-value=2.6 Score=28.67 Aligned_cols=85 Identities=9% Similarity=0.094 Sum_probs=52.4
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--h
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL--M 104 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~--~ 104 (139)
++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+.... ..++.++..|+.+. +..+.. .
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-----GVEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 35566666 45666666666552 23489999999888777766665311 25788888998762 111110 1
Q ss_pred ccCCceeEEecCcccc
Q psy5757 105 MKFDRYDFLPHAPAES 120 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~~ 120 (139)
...+.+|+++.|....
T Consensus 76 ~~~g~id~li~~Ag~~ 91 (235)
T 3l77_A 76 ERFGDVDVVVANAGLG 91 (235)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HhcCCCCEEEECCccc
Confidence 1124689999987643
No 366
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=90.59 E-value=2.3 Score=29.85 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=50.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeC-------------CHHHHHHHHHHHHhhccccccCCcEEEEEccc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEH-------------VPQLVNSSIQNILHSNARLLTDGHIKFVALGM 94 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~-------------~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~ 94 (139)
.++.+|--|++ +..+..+++.+ ....+|+.++. +++.++.+.+.+... ..++.++..|+
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~ 82 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA------NRRIVAAVVDT 82 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEEEEECCT
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc------CCeEEEEECCC
Confidence 45677776654 45555555544 12348999987 566666655554441 25688888888
Q ss_pred hhh--hHHHhh--hccCCceeEEecCccc
Q psy5757 95 IKR--IETVEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 95 ~~~--~~~~~~--~~~~~~~D~vi~~~~~ 119 (139)
.+. +..+.. ....+++|+++.|...
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 83 RDFDRLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 762 122111 1123579999998864
No 367
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=90.57 E-value=2.6 Score=27.87 Aligned_cols=73 Identities=14% Similarity=0.205 Sum_probs=47.6
Q ss_pred eEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhhccCCc
Q psy5757 32 KVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELMMKFDR 109 (139)
Q Consensus 32 ~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~~~~~ 109 (139)
++|-.| |+|..+..+++.+-.+ +|+.++.++...+...+.+ .. +++..|+.+. +..+... .+.
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~----------~~-~~~~~D~~~~~~~~~~~~~--~~~ 66 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREV----------GA-RALPADLADELEAKALLEE--AGP 66 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHH----------TC-EECCCCTTSHHHHHHHHHH--HCS
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhc----------cC-cEEEeeCCCHHHHHHHHHh--cCC
Confidence 455554 6888999999998666 9999999876655443322 12 6677787651 2222111 346
Q ss_pred eeEEecCccc
Q psy5757 110 YDFLPHAPAE 119 (139)
Q Consensus 110 ~D~vi~~~~~ 119 (139)
+|+++.+...
T Consensus 67 id~vi~~ag~ 76 (207)
T 2yut_A 67 LDLLVHAVGK 76 (207)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999988753
No 368
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.53 E-value=3 Score=28.81 Aligned_cols=85 Identities=12% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc--hh--hhHHH
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM--IK--RIETV 101 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~--~~--~~~~~ 101 (139)
..++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++.+.+.+.. +- .++.++..|+ .+ .+.++
T Consensus 10 l~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~ 82 (252)
T 3f1l_A 10 LNDRIILVTGA-SDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG------RQPQWFILDLLTCTSENCQQL 82 (252)
T ss_dssp TTTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS------CCCEEEECCTTTCCHHHHHHH
T ss_pred cCCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC------CCceEEEEecccCCHHHHHHH
Confidence 34567777665 555666666554 2234899999998888777666654 21 4677888887 33 12221
Q ss_pred h--hhccCCceeEEecCccc
Q psy5757 102 E--LMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 102 ~--~~~~~~~~D~vi~~~~~ 119 (139)
. .....+.+|+++.|...
T Consensus 83 ~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 83 AQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHHCSCCSEEEECCCC
T ss_pred HHHHHHhCCCCCEEEECCcc
Confidence 1 11234679999998764
No 369
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=90.43 E-value=1.6 Score=28.89 Aligned_cols=44 Identities=14% Similarity=0.176 Sum_probs=30.7
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSI 71 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~ 71 (139)
.++++++||..|+ |.|.....++...+ ++|++++.+++..+.++
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Confidence 3678899999984 34455555555544 38999999987766553
No 370
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=90.42 E-value=3 Score=29.22 Aligned_cols=85 Identities=8% Similarity=0.128 Sum_probs=51.1
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCC------------HHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHV------------PQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~------------~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+ ++.++...+.+... ..++.++..|+.
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI------GSRIVARQADVR 84 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH------TCCEEEEECCTT
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc------CCeEEEEeCCCC
Confidence 4567777664 555566665554 123489999876 55565555554441 157888999987
Q ss_pred hh--hHHHhh--hccCCceeEEecCcccc
Q psy5757 96 KR--IETVEL--MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 96 ~~--~~~~~~--~~~~~~~D~vi~~~~~~ 120 (139)
+. +..+.. ....+.+|++|.|....
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 62 222111 11235799999988643
No 371
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.38 E-value=1.2 Score=33.25 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=36.1
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++.+||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 368899999999875 7778888887642 289999999887777653
No 372
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=90.01 E-value=1.8 Score=30.55 Aligned_cols=82 Identities=13% Similarity=0.120 Sum_probs=51.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++...+.+.. + ..++.++..|+.+. +..+..
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~v~~~~~~ 99 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------AASAHYIAGTMEDMTFAEQFVAQ 99 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------CSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------CCceEEEeCCCCCHHHHHHHHHH
Confidence 456777666 55667777666551 234899999998877766555544 2 14688888898761 222111
Q ss_pred -hccCCceeEEecCc
Q psy5757 104 -MMKFDRYDFLPHAP 117 (139)
Q Consensus 104 -~~~~~~~D~vi~~~ 117 (139)
....+.+|++|.|.
T Consensus 100 ~~~~~g~iD~li~na 114 (286)
T 1xu9_A 100 AGKLMGGLDMLILNH 114 (286)
T ss_dssp HHHHHTSCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 11234689999883
No 373
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.00 E-value=2 Score=30.46 Aligned_cols=84 Identities=15% Similarity=0.198 Sum_probs=52.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.| |+|..+..+++.+ ....+|+.++.+++.++.+.+.+.. +- ..+.++..|+.+. +..+..
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 104 (281)
T 4dry_A 32 EGRIALVTG-GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG------NIVRAVVCDVGDPDQVAALFAA 104 (281)
T ss_dssp --CEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS------SCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC------CeEEEEEcCCCCHHHHHHHHHH
Confidence 456666655 4566666666655 2234899999998888777666654 22 3457888888762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 105 ~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 105 VRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1124578999998864
No 374
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=89.99 E-value=2.5 Score=29.04 Aligned_cols=84 Identities=11% Similarity=0.156 Sum_probs=52.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.| |+|..+..+++.+- ...+|+.++.++...+...+.+... ..++.++..|+.+. +..+..
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME------GHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHHH
Confidence 456777766 55667777766552 2348999999987666555555431 14688888998762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 85 ~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 85 HEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123468999988753
No 375
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.98 E-value=1.8 Score=31.02 Aligned_cols=86 Identities=3% Similarity=-0.042 Sum_probs=54.5
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
..++.+|-.|++ |..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ------GFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHH
Confidence 356678777655 55556665554 12348999999988888777766551 14788888898762 222111
Q ss_pred -hccCCceeEEecCcccc
Q psy5757 104 -MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~~ 120 (139)
....+.+|++|.|....
T Consensus 102 ~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHSSCSEEEECCCCC
T ss_pred HHHhCCCCCEEEECCCcC
Confidence 11234789999987643
No 376
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.70 E-value=3.6 Score=28.86 Aligned_cols=85 Identities=9% Similarity=0.100 Sum_probs=51.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeC-------------CHHHHHHHHHHHHhhccccccCCcEEEEEcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEH-------------VPQLVNSSIQNILHSNARLLTDGHIKFVALG 93 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~-------------~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d 93 (139)
..++.+|--|++ |..+..+++.+ ....+|+.++. +++.++.+.+.+... ..++.++..|
T Consensus 13 l~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D 85 (280)
T 3pgx_A 13 LQGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ------GRKALTRVLD 85 (280)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT------TCCEEEEECC
T ss_pred cCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc------CCeEEEEEcC
Confidence 355677776655 55555555544 22348999987 566666666555441 1467888888
Q ss_pred chhh--hHHHhh--hccCCceeEEecCccc
Q psy5757 94 MIKR--IETVEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 94 ~~~~--~~~~~~--~~~~~~~D~vi~~~~~ 119 (139)
+.+. +..+.. ....+.+|+++.|...
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 8762 222111 1124579999998764
No 377
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.65 E-value=3 Score=29.54 Aligned_cols=84 Identities=11% Similarity=0.124 Sum_probs=52.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
+++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGA-GSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA------GGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4566776664 455666666554 22348999999988777776666441 14688888898762 122111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1124579999998764
No 378
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.62 E-value=1.2 Score=32.25 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=34.8
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQN 73 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~ 73 (139)
.++++++||-.|+ |.|.....+++..+ ++|++++.+++..+.+.+.
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~ 193 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLVEE 193 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHH
Confidence 3688999999997 35666777777665 3999999998877776443
No 379
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=89.58 E-value=1.8 Score=30.54 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=54.2
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
..++.+|--| |+|..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+.
T Consensus 24 l~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 24 LGGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV------GHDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp CTTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT------TCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHHH
Confidence 3556776665 5566666666655 22348999999988877776666541 14688888888762 22211
Q ss_pred hhccCCceeEEecCcccc
Q psy5757 103 LMMKFDRYDFLPHAPAES 120 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~~ 120 (139)
.....+.+|+++.|....
T Consensus 97 ~~~~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 97 LDEQGIDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHTCCCCEEEECCCCC
T ss_pred HHHHCCCCCEEEECCCCC
Confidence 112345799999987643
No 380
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.52 E-value=4.5 Score=29.43 Aligned_cols=45 Identities=22% Similarity=0.288 Sum_probs=35.3
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-.|+ |.|..+..+++..+. +|++++.+++..+.+++
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 3678999999997 356777777777653 99999999887777765
No 381
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.51 E-value=2.8 Score=29.08 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=51.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+- ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK------GFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4567776664 5666666666552 2348999999987776655554431 14678888888762 222111
Q ss_pred hccC-CceeEEecCccc
Q psy5757 104 MMKF-DRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~-~~~D~vi~~~~~ 119 (139)
.... +.+|+++.|...
T Consensus 81 ~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHTTTCCCEEEECCCC
T ss_pred HHHcCCCCCEEEECCCC
Confidence 1123 578999988763
No 382
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.45 E-value=2.3 Score=31.68 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=35.7
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++.+||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHH
Confidence 367899999999764 6777788887642 279999999988887754
No 383
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.34 E-value=3.7 Score=28.70 Aligned_cols=84 Identities=7% Similarity=0.026 Sum_probs=52.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++++|-.| |+|..+..+++.+. ...+|+.++.++...+...+.+... ..++.++..|+.+. +.++..
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------GAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc------CCeEEEEEeeCCCHHHHHHHHHHH
Confidence 456777766 45667777766552 2348999999987776665555441 14688888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 103 ~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHTCCCSEEEECCCC
T ss_pred HHHCCCCcEEEECCCc
Confidence 1124578999988753
No 384
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=89.32 E-value=3.2 Score=28.79 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=50.6
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhhc-
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELMM- 105 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~- 105 (139)
++.+|--| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+....
T Consensus 5 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 5 GQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL------GGQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH------SSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc------CCceEEEECCCCCHHHHHHHHHHHH
Confidence 45666655 56666776666552 2348999999987776665555431 14678888888762 22221111
Q ss_pred --cCCceeEEecCc
Q psy5757 106 --KFDRYDFLPHAP 117 (139)
Q Consensus 106 --~~~~~D~vi~~~ 117 (139)
..+++|+++.|.
T Consensus 78 ~~~~g~id~lvnnA 91 (260)
T 2qq5_A 78 REQQGRLDVLVNNA 91 (260)
T ss_dssp HHHTTCCCEEEECC
T ss_pred HhcCCCceEEEECC
Confidence 156789999987
No 385
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=89.30 E-value=2.7 Score=29.54 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=52.1
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--| |+|..+..+++.+ ....+|+.++.+++..+...+.+... ..++.++..|+.+. +..+..
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA------GLEGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEEeCCCHHHHHHHHHHH
Confidence 455666555 5666666666655 22348999999988877776666551 13577788887752 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
...++.+|++|.|...
T Consensus 100 ~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1124578999998763
No 386
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.25 E-value=2.1 Score=30.54 Aligned_cols=84 Identities=17% Similarity=0.057 Sum_probs=50.4
Q ss_pred CCCeEEEEcccC-ChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGS-GYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~-G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.|+++ ...+..+++.+ ....+|+.++.++...+.+.+.... ..++.++..|+.+. +..+..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-------LGVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-------HTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-------cCCeEEEEcCCCCHHHHHHHHHH
Confidence 467888888754 35555555544 1234899999987655555544443 13457788887762 222211
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 102 ~~~~~g~iD~lVnnAG~ 118 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAF 118 (296)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1123578999998864
No 387
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.21 E-value=4.7 Score=29.25 Aligned_cols=45 Identities=16% Similarity=0.223 Sum_probs=34.9
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.+++++++|-.|+ |.|.....+++..+ +++++++.+++.++.+++
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHh
Confidence 3678899999998 45667777777664 389999999888877754
No 388
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=89.19 E-value=3.9 Score=28.83 Aligned_cols=85 Identities=13% Similarity=0.185 Sum_probs=51.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeC-CHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEH-VPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~-~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
.++.+|--|+ +|..+..+++.+ ....+|+..+. +++.++...+.+... ...++.++..|+.+. +..+.
T Consensus 24 ~~k~~lVTGa-s~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 24 MTKTAVITGS-TSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-----SSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT-----CSSCEEEECCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc-----cCCcEEEEeCCCCCHHHHHHHHHH
Confidence 4567777665 455566666554 22348999987 666666655555441 125788888888762 22211
Q ss_pred hhccCCceeEEecCccc
Q psy5757 103 LMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~ 119 (139)
.....+.+|+++.|...
T Consensus 98 ~~~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 98 VADRFGGADILVNNAGV 114 (281)
T ss_dssp HHHHTSSCSEEEECCCC
T ss_pred HHHHCCCCCEEEECCCC
Confidence 11234579999988764
No 389
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.15 E-value=1.9 Score=29.17 Aligned_cols=72 Identities=14% Similarity=0.061 Sum_probs=43.1
Q ss_pred CeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCc
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDR 109 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~ 109 (139)
++|+-+|+ |..+..+++.+. ....++.+|.+++.++...+. .+..++.+|..+ ...+. .+....
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-----------~~~~~i~gd~~~-~~~l~-~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-----------LKATIIHGDGSH-KEILR-DAEVSK 65 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-----------SSSEEEESCTTS-HHHHH-HHTCCT
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----------cCCeEEEcCCCC-HHHHH-hcCccc
Confidence 35666664 667777776552 234899999998877654432 235577888765 22221 222345
Q ss_pred eeEEecCc
Q psy5757 110 YDFLPHAP 117 (139)
Q Consensus 110 ~D~vi~~~ 117 (139)
.|+++...
T Consensus 66 ad~vi~~~ 73 (218)
T 3l4b_C 66 NDVVVILT 73 (218)
T ss_dssp TCEEEECC
T ss_pred CCEEEEec
Confidence 67776554
No 390
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=89.10 E-value=2.2 Score=29.99 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=46.2
Q ss_pred CeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--hhc
Q psy5757 31 SKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE--LMM 105 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~--~~~ 105 (139)
+.+|--|++ ++.+..+++.+ ...++|+.+|.+++..+...+. ..++..+..|+.+. ..++. ...
T Consensus 3 K~vlVTGas-~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----------RPNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----------CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEecCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 456655554 44555555544 2235999999997665543322 25677888888762 22221 122
Q ss_pred cCCceeEEecCcc
Q psy5757 106 KFDRYDFLPHAPA 118 (139)
Q Consensus 106 ~~~~~D~vi~~~~ 118 (139)
.++++|+++.|..
T Consensus 72 ~~g~iDiLVNNAG 84 (247)
T 3ged_A 72 KLQRIDVLVNNAC 84 (247)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 3578999998875
No 391
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=89.10 E-value=3.4 Score=28.24 Aligned_cols=84 Identities=11% Similarity=0.147 Sum_probs=52.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++++|-.| |+|..+..+++.+- ...+|+.++.++...+...+.+... ..++.++..|+.+. +..+..
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL------GGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh------CCceEEEEcCCCCHHHHHHHHHHH
Confidence 456776655 67778888877662 2358999999987766655555431 14678888887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 83 ~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 83 ISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 1113468999988753
No 392
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.07 E-value=3 Score=28.53 Aligned_cols=84 Identities=13% Similarity=0.150 Sum_probs=52.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccc--hh--hhHHHh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGM--IK--RIETVE 102 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~--~~--~~~~~~ 102 (139)
+++.+|-.|+ +|..+..+++.+- ...+|+.++.+++.++.+.+.+.. +. .+..++..|. .+ .+..+.
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ------PQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS------CCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC------CCceEEEeccccCCHHHHHHHH
Confidence 4567776664 5666666666552 234899999998888887777665 32 4566776665 32 122211
Q ss_pred h--hccCCceeEEecCccc
Q psy5757 103 L--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 ~--~~~~~~~D~vi~~~~~ 119 (139)
. ....+.+|++|.|...
T Consensus 86 ~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHhCCCCCEEEECCcc
Confidence 1 1123578999998764
No 393
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=89.07 E-value=1.5 Score=31.09 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=52.1
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 7 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 7 EGKIAIVTGA-SSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG------GGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT------TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4566766664 455666666554 12348999999988777776665441 14678888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 80 ~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123579999988763
No 394
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.05 E-value=3 Score=29.29 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=52.0
Q ss_pred CCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--h
Q psy5757 30 NSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL--M 104 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~--~ 104 (139)
++.+|--|+ +|+.+..+++.+ ....+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+.. .
T Consensus 4 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 4 DKVILITGA-SGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA------GGTALAQVLDVTDRHSVAAFAQAAV 76 (264)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 456666554 456666666655 22348999999988887777666551 14677888888762 222111 1
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
...+.+|+++.|...
T Consensus 77 ~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 124579999988754
No 395
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=89.00 E-value=3.2 Score=29.31 Aligned_cols=81 Identities=10% Similarity=0.083 Sum_probs=49.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|++ |..+..+++.+ ....+|+.++.+++.++.+.+.+ . .++.++..|+.+. +..+..
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~--------~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-G--------CGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-C--------SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-C--------CcceEEEecCCCHHHHHHHHHHH
Confidence 45667766654 55555555544 22348999999987776655543 1 4677888887762 122111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 98 ~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 98 VAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1124578999988764
No 396
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=88.97 E-value=3.4 Score=28.49 Aligned_cols=81 Identities=23% Similarity=0.215 Sum_probs=49.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+++..+...+.+. .+..++..|+.+. +..+..
T Consensus 8 ~gk~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~ 77 (248)
T 3op4_A 8 EGKVALVTGA-SRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG---------DNGKGMALNVTNPESIEAVLKAI 77 (248)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------ccceEEEEeCCCHHHHHHHHHHH
Confidence 4567776664 455666666554 223489999999877766655442 3456777887752 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 78 ~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 78 TDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123578999998764
No 397
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.95 E-value=3.2 Score=29.02 Aligned_cols=85 Identities=11% Similarity=0.066 Sum_probs=51.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
+++.+|-.| |+|..+..+++.+. ...+|+.++.++..++...+.+.. +. ..++.++..|+.+. +..+..
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-----PGTLIPYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-----CceEEEEEecCCCHHHHHHHHHH
Confidence 346677666 56677777766552 234899999998777666555544 21 24677888887752 221111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 105 ~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 105 IRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCC
Confidence 1123468999988753
No 398
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=88.91 E-value=3 Score=29.47 Aligned_cols=79 Identities=11% Similarity=0.108 Sum_probs=50.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhhc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELMM 105 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~ 105 (139)
+++.+|--|+ +|..+..+++.+. ...+|+.++.++...+.+.+.+ ..++.++..|+.+. +..+...
T Consensus 15 ~gk~vlVTGa-s~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~v~~~~~~- 83 (291)
T 3rd5_A 15 AQRTVVITGA-NSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---------AGQVEVRELDLQDLSSVRRFADG- 83 (291)
T ss_dssp TTCEEEEECC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---------SSEEEEEECCTTCHHHHHHHHHT-
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------cCCeeEEEcCCCCHHHHHHHHHh-
Confidence 5567776664 5666666666552 2348999999977665544332 25788899998762 2222222
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
.+.+|+++.|...
T Consensus 84 -~~~iD~lv~nAg~ 96 (291)
T 3rd5_A 84 -VSGADVLINNAGI 96 (291)
T ss_dssp -CCCEEEEEECCCC
T ss_pred -cCCCCEEEECCcC
Confidence 2578999998764
No 399
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=88.85 E-value=1.7 Score=31.16 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=53.1
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--h
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE--L 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~--~ 103 (139)
.++.+|--| |+|..+..+++.+ ....+|+.++.+++.++.+.+.+.. ....++.++..|+.+. +..+. .
T Consensus 40 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 40 SARSVLVTG-GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE-----LGAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT-----SSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----hCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 455666555 5566666666655 2234899999998877777666654 1125788899998762 11211 1
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
...++.+|++|.|...
T Consensus 114 ~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 114 VDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1124578999988763
No 400
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.75 E-value=3.5 Score=28.87 Aligned_cols=84 Identities=11% Similarity=0.111 Sum_probs=51.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK------GLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHHHH
Confidence 4567777664 5666666666552 2348999999987776665555431 14678888887752 222111
Q ss_pred hccC-CceeEEecCccc
Q psy5757 104 MMKF-DRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~-~~~D~vi~~~~~ 119 (139)
.... +.+|+++.|...
T Consensus 93 ~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHTTSCCCEEEECCCC
T ss_pred HHHcCCCCcEEEECCCC
Confidence 1123 678999998763
No 401
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.72 E-value=0.79 Score=32.98 Aligned_cols=83 Identities=13% Similarity=0.129 Sum_probs=48.2
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
+++||-.| |+|..+..+++.+- ...+|++++.++.......+.+.... ..++.++.+|+.+ ...+..-....
T Consensus 5 ~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d-~~~~~~~~~~~ 77 (341)
T 3enk_A 5 KGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-----GKTPAFHETDVSD-ERALARIFDAH 77 (341)
T ss_dssp SCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-----SCCCEEECCCTTC-HHHHHHHHHHS
T ss_pred CcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-----CCCceEEEeecCC-HHHHHHHHhcc
Confidence 46777655 67888888777652 23489999876544333333332200 2568888899876 22221111113
Q ss_pred ceeEEecCccc
Q psy5757 109 RYDFLPHAPAE 119 (139)
Q Consensus 109 ~~D~vi~~~~~ 119 (139)
.+|+|+.+...
T Consensus 78 ~~d~vih~A~~ 88 (341)
T 3enk_A 78 PITAAIHFAAL 88 (341)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECccc
Confidence 58999887753
No 402
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.66 E-value=2.9 Score=31.22 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
++++.+||-+|+|. |..+..+++..+. .+|++++.+++.++.+++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGA-SKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 67889999999853 5666677776642 289999999988887765
No 403
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.54 E-value=3.3 Score=29.83 Aligned_cols=44 Identities=16% Similarity=0.265 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
++++++||-.|+ |.|.....+++..+. +|++++.+++.++.+++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 678899999883 356677777777653 89999999988887764
No 404
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.41 E-value=3.5 Score=29.35 Aligned_cols=83 Identities=16% Similarity=0.147 Sum_probs=50.2
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEE-EccchhhhHHHhhhc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFV-ALGMIKRIETVELMM 105 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~-~~d~~~~~~~~~~~~ 105 (139)
.++++||-.| |+|..+..+++.+- ...+|++++.++.......+.+.... ..+++++ .+|+.+ ...+..
T Consensus 9 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~d-~~~~~~-- 79 (342)
T 1y1p_A 9 PEGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-----PGRFETAVVEDMLK-QGAYDE-- 79 (342)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-----TTTEEEEECSCTTS-TTTTTT--
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-----CCceEEEEecCCcC-hHHHHH--
Confidence 4567888765 56877777776552 23489999988766554444332210 1467887 788765 221111
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
-.+.+|+|+++...
T Consensus 80 ~~~~~d~vih~A~~ 93 (342)
T 1y1p_A 80 VIKGAAGVAHIASV 93 (342)
T ss_dssp TTTTCSEEEECCCC
T ss_pred HHcCCCEEEEeCCC
Confidence 12358999887753
No 405
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=88.36 E-value=1.2 Score=32.66 Aligned_cols=45 Identities=22% Similarity=0.369 Sum_probs=34.8
Q ss_pred CCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
++++.+||-+|+|. |..+..+++..+. .+|++++.+++..+.+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 67899999999864 6677777776642 289999999887777754
No 406
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=88.33 E-value=3.9 Score=28.79 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=49.9
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
..++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++...+.+ ..++.++..|+.+. +..+..
T Consensus 25 l~~k~vlVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 25 LNQRVCIVTGG-GSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---------GSKAFGVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp TTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceEEEEecCCCHHHHHHHHHH
Confidence 34567777665 455666666554 22348999999987666554442 14677888888762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+++|+++.|...
T Consensus 95 ~~~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 95 TTAKWGRVDVLVNNAGF 111 (277)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1123578999998764
No 407
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.31 E-value=2.1 Score=31.15 Aligned_cols=46 Identities=20% Similarity=0.259 Sum_probs=36.3
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++.+||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH
Confidence 468899999999864 677777887763 3499999999988887755
No 408
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.22 E-value=3.5 Score=26.15 Aligned_cols=74 Identities=11% Similarity=0.051 Sum_probs=43.3
Q ss_pred CeEEEEcccCChhHHHHHHHcC-CCceEEEEeCC-HHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN-STGQVIGIEHV-PQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~-~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
.+++-+|+ |..+..+++.+. ....++.+|.+ ++..+...+.. ...+.++.+|..+ ...+ .....+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---------~~~~~~i~gd~~~-~~~l-~~a~i~ 70 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---------GDNADVIPGDSND-SSVL-KKAGID 70 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---------CTTCEEEESCTTS-HHHH-HHHTTT
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---------cCCCeEEEcCCCC-HHHH-HHcChh
Confidence 46777664 777777776652 13389999997 45444443322 1356788888765 2222 122345
Q ss_pred ceeEEecCc
Q psy5757 109 RYDFLPHAP 117 (139)
Q Consensus 109 ~~D~vi~~~ 117 (139)
..|+|+..-
T Consensus 71 ~ad~vi~~~ 79 (153)
T 1id1_A 71 RCRAILALS 79 (153)
T ss_dssp TCSEEEECS
T ss_pred hCCEEEEec
Confidence 577777654
No 409
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=88.20 E-value=4.6 Score=28.32 Aligned_cols=86 Identities=10% Similarity=0.161 Sum_probs=53.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.++.+++.++.+.+.+.. +. ...++.++..|+.+. +..+..
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA----NGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC----SSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC----CCceEEEEeCCCCCHHHHHHHHHH
Confidence 4567777665 555566665554 2234899999998888777766655 21 012788888998762 122111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 85 ~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1123578999998864
No 410
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=88.14 E-value=4.7 Score=28.31 Aligned_cols=85 Identities=8% Similarity=0.119 Sum_probs=50.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCC----------------HHHHHHHHHHHHhhccccccCCcEEEEE
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHV----------------PQLVNSSIQNILHSNARLLTDGHIKFVA 91 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~----------------~~~~~~a~~~~~~~~~~~~~~~~i~~~~ 91 (139)
.++.+|--|+++ ..+..+++.+ ....+|+.+|.+ ++.++...+.+... ..++.++.
T Consensus 10 ~~k~~lVTGas~-gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 82 (286)
T 3uve_A 10 EGKVAFVTGAAR-GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH------NRRIVTAE 82 (286)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT------TCCEEEEE
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc------CCceEEEE
Confidence 456777776554 4555555544 223489999876 55566555554441 15788888
Q ss_pred ccchhh--hHHHhh--hccCCceeEEecCcccc
Q psy5757 92 LGMIKR--IETVEL--MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 92 ~d~~~~--~~~~~~--~~~~~~~D~vi~~~~~~ 120 (139)
.|+.+. +..+.. ....+.+|++|.|....
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 888762 222111 11235799999988643
No 411
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=88.12 E-value=4.5 Score=28.26 Aligned_cols=86 Identities=13% Similarity=0.035 Sum_probs=51.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
..++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++.+.+.+.... ..++.++..|+.+. +..+..
T Consensus 19 l~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 92 (267)
T 1vl8_A 19 LRGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-----GVETMAFRCDVSNYEEVKKLLEA 92 (267)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHH
Confidence 34567776664 5666666666552 23489999999877766655542200 14677888887751 221111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 93 ~~~~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 93 VKEKFGKLDTVVNAAGI 109 (267)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1123568999988753
No 412
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=88.10 E-value=2.5 Score=29.80 Aligned_cols=85 Identities=8% Similarity=0.025 Sum_probs=53.1
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
..++.+|--|++ |..+..+++.+ ....+|+.++.+++.++...+.+... ..++.++..|+.+. +..+..
T Consensus 30 l~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 30 LSGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV------GGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp CTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHHH
Confidence 456777776654 55566665554 12348999999988777766666541 14678888888762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 103 ~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1123579999998764
No 413
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.00 E-value=5 Score=28.06 Aligned_cols=84 Identities=8% Similarity=0.083 Sum_probs=50.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCC------------HHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHV------------PQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~------------~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
.++.+|--|++ |..+..+++.+ ....+|+.++.+ ...++.+...+... ..++.++..|+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT------GRKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT------TSCEEEEECCTT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc------CCceEEEEccCC
Confidence 45677776654 55566655554 123489999876 55566555555441 257888888887
Q ss_pred hh--hHHHhh--hccCCceeEEecCccc
Q psy5757 96 KR--IETVEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 96 ~~--~~~~~~--~~~~~~~D~vi~~~~~ 119 (139)
+. +.++.. ....+.+|++|.|...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 62 111111 1123578999998764
No 414
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=87.97 E-value=2.6 Score=28.78 Aligned_cols=83 Identities=10% Similarity=0.047 Sum_probs=50.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
+++.+|-.| |+|..+..+++.+. ...+|+.++.+++..+...+.+.. ..+++++..|+.+. +..+..
T Consensus 5 ~~k~vlVtG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (251)
T 1zk4_A 5 DGKVAIITG-GTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-------PDQIQFFQHDSSDEDGWTKLFDAT 76 (251)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-------TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-------cCceEEEECCCCCHHHHHHHHHHH
Confidence 346676655 56777777776552 234899999987766555444322 14688888887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 77 ~~~~~~id~li~~Ag~ 92 (251)
T 1zk4_A 77 EKAFGPVSTLVNNAGI 92 (251)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1123468999988753
No 415
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.91 E-value=5.3 Score=28.13 Aligned_cols=84 Identities=12% Similarity=0.063 Sum_probs=49.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeC-CHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEH-VPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~-~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|--|+ +|..+..+++.+- ...+|+.++. +++..+...+.+... ..++.++..|+.+. +..+..
T Consensus 28 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 28 ARPVAIVTGG-RRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL------GARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT------TCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCCEEEEecC-CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHH
Confidence 4566776664 5555666665542 2348988885 666666655555441 15788888888762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1123578999988764
No 416
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=87.91 E-value=2.5 Score=30.44 Aligned_cols=82 Identities=16% Similarity=0.198 Sum_probs=48.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHH----HHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQ----LVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVEL 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~----~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 103 (139)
.+++||-.| |+|..+..+++.+- ...+|++++.++. .+.......... ...+++++.+|+.+ ...+..
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d-~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE-----QWSRFCFIEGDIRD-LTTCEQ 96 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH-----HHTTEEEEECCTTC-HHHHHH
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc-----cCCceEEEEccCCC-HHHHHH
Confidence 457888765 67888888877652 2348999987533 222222211110 01578999999876 333322
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
- .+.+|+||.....
T Consensus 97 ~--~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 97 V--MKGVDHVLHQAAL 110 (351)
T ss_dssp H--TTTCSEEEECCCC
T ss_pred H--hcCCCEEEECCcc
Confidence 2 2368999887753
No 417
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=87.91 E-value=2.4 Score=30.01 Aligned_cols=84 Identities=12% Similarity=0.087 Sum_probs=49.0
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
.+++.+|--|+++| .+..+++.+ ...++|+.++.+++..+.+.+..+. ..++.++..|+.+. ..++.
T Consensus 5 L~gKvalVTGas~G-IG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~v~~ 76 (258)
T 4gkb_A 5 LQDKVVIVTGGASG-IGGAISMRLAEERAIPVVFARHAPDGAFLDALAQR-------QPRATYLPVELQDDAQCRDAVAQ 76 (258)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhc-------CCCEEEEEeecCCHHHHHHHHHH
Confidence 35677777776655 444444433 1234888888876554444333333 25677888888762 12211
Q ss_pred hhccCCceeEEecCccc
Q psy5757 103 LMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~ 119 (139)
....++++|+++.|.-.
T Consensus 77 ~~~~~G~iDiLVNnAGi 93 (258)
T 4gkb_A 77 TIATFGRLDGLVNNAGV 93 (258)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 12235789999998864
No 418
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.80 E-value=3.7 Score=29.69 Aligned_cols=45 Identities=16% Similarity=0.338 Sum_probs=34.1
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-.|+ |.|..+..+++..+ ++|++++.+++.++.+++
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 3678899999984 35666777777664 489999999887776654
No 419
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.79 E-value=4.6 Score=29.05 Aligned_cols=84 Identities=10% Similarity=0.136 Sum_probs=49.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCC------------HHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHV------------PQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~------------~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
.++.+|--|+ +|..+..+++.+ ....+|+.+|.+ ++.++.+.+.+... ..++.++..|+.
T Consensus 45 ~gk~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~ 117 (317)
T 3oec_A 45 QGKVAFITGA-ARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ------GRRIIARQADVR 117 (317)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEEEEECCTT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc------CCeEEEEECCCC
Confidence 4556666554 555666666655 223489998875 55555554444431 146888888887
Q ss_pred hh--hHHHhh--hccCCceeEEecCccc
Q psy5757 96 KR--IETVEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 96 ~~--~~~~~~--~~~~~~~D~vi~~~~~ 119 (139)
+. +..+.. ...++.+|++|.|...
T Consensus 118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 118 DLASLQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 62 222111 1124579999998763
No 420
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.65 E-value=1.7 Score=33.01 Aligned_cols=73 Identities=14% Similarity=0.167 Sum_probs=46.0
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
.++|+-+|+ |.++..+++.+. ....++.+|.+++.++.+++ ..+.++.+|..+ ...+ ..+..+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~------------~g~~vi~GDat~-~~~L-~~agi~ 67 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK------------FGMKVFYGDATR-MDLL-ESAGAA 67 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH------------TTCCCEESCTTC-HHHH-HHTTTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh------------CCCeEEEcCCCC-HHHH-HhcCCC
Confidence 356777665 666666666552 13489999999998887753 234578888776 2222 223345
Q ss_pred ceeEEecCcc
Q psy5757 109 RYDFLPHAPA 118 (139)
Q Consensus 109 ~~D~vi~~~~ 118 (139)
..|+|+....
T Consensus 68 ~A~~viv~~~ 77 (413)
T 3l9w_A 68 KAEVLINAID 77 (413)
T ss_dssp TCSEEEECCS
T ss_pred ccCEEEECCC
Confidence 6777766543
No 421
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=87.52 E-value=4.7 Score=29.49 Aligned_cols=45 Identities=18% Similarity=0.244 Sum_probs=32.8
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-.|+ |.|.....+++..+ ++|++++.+++..+.+++
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHH
Confidence 3678899999996 34556666666654 489999999887775543
No 422
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.51 E-value=3.1 Score=27.19 Aligned_cols=72 Identities=11% Similarity=0.069 Sum_probs=40.7
Q ss_pred CCeEEEEcccCChhHHHHHHHcCC--CceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhc-c
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNS--TGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMM-K 106 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~--~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~-~ 106 (139)
+++|+-+|+ |..+..+++.+.. ..+|+++|.+++.++.+++ ..+.++.+|..+ ...+ ... .
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~------------~g~~~~~gd~~~-~~~l-~~~~~ 102 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS------------EGRNVISGDATD-PDFW-ERILD 102 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH------------TTCCEEECCTTC-HHHH-HTBCS
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH------------CCCCEEEcCCCC-HHHH-HhccC
Confidence 457888775 5555555554421 2379999999877665543 133456666543 1211 122 2
Q ss_pred CCceeEEecCc
Q psy5757 107 FDRYDFLPHAP 117 (139)
Q Consensus 107 ~~~~D~vi~~~ 117 (139)
.+.+|+|+...
T Consensus 103 ~~~ad~vi~~~ 113 (183)
T 3c85_A 103 TGHVKLVLLAM 113 (183)
T ss_dssp CCCCCEEEECC
T ss_pred CCCCCEEEEeC
Confidence 34578777643
No 423
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=87.49 E-value=3.4 Score=29.19 Aligned_cols=85 Identities=8% Similarity=0.120 Sum_probs=52.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++++|-.| |+|..+..+++.+. ...+|+.++.++...+...+.+.... ..++.++..|+.+. +..+..
T Consensus 25 ~~k~vlITG-asggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 25 QGKVAFITG-GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-----GNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCceEEEEeCCCCHHHHHHHHHHH
Confidence 456777666 45666777666552 23489999999877766655554310 15688889998751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 99 ~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 99 IKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHTCSCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1124578999988764
No 424
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=87.49 E-value=5.7 Score=27.85 Aligned_cols=84 Identities=10% Similarity=0.093 Sum_probs=51.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
+++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA------GVEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHHHH
Confidence 4567777664 5666666666552 2348999999987776665555431 14677888887752 121111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 94 ~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 94 VERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHTCSCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1124578999988753
No 425
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.48 E-value=5.1 Score=27.81 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=48.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEE-eCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGI-EHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~-d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|--|++ |..+..+++.+. ...+|+.+ +.+++..+.+.+.+... ..++.++..|+.+. +..+..
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL------GRSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT------TSCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHHH
Confidence 45677777654 455555555541 23477777 66666666665555441 14678888888762 222111
Q ss_pred -hccCCceeEEecCcc
Q psy5757 104 -MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~ 118 (139)
....+.+|+++.|..
T Consensus 80 ~~~~~g~id~lv~nAg 95 (259)
T 3edm_A 80 AADKFGEIHGLVHVAG 95 (259)
T ss_dssp HHHHHCSEEEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 112357999998875
No 426
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.48 E-value=1.1 Score=33.29 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=35.6
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++.+||-+|+|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga--~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 368899999999874 6677777777653 89999999888887765
No 427
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.45 E-value=5.4 Score=28.36 Aligned_cols=84 Identities=11% Similarity=0.124 Sum_probs=50.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCC------------HHHHHHHHHHHHhhccccccCCcEEEEEccch
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHV------------PQLVNSSIQNILHSNARLLTDGHIKFVALGMI 95 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~------------~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~ 95 (139)
.++.+|--|++ +..+..+++.+ ....+|+.++.+ ++.++.+.+.+... ..++.++..|+.
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL------GRRIIASQVDVR 99 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEEEEECCTT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc------CCceEEEECCCC
Confidence 45677777655 45555555544 223489999876 55565555554441 157888889987
Q ss_pred hh--hHHHhh--hccCCceeEEecCccc
Q psy5757 96 KR--IETVEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 96 ~~--~~~~~~--~~~~~~~D~vi~~~~~ 119 (139)
+. +..+.. ....+.+|++|.|...
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 62 122111 1124579999988764
No 428
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.43 E-value=4.9 Score=29.71 Aligned_cols=45 Identities=20% Similarity=0.258 Sum_probs=33.8
Q ss_pred CCCCCeEEEEccc-CChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSG-SGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~G-~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
++++.+||-+|+| .|..+..+++..+ -.+|++++.+++..+.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH
Confidence 6788999999965 3566667777654 1389999999988877763
No 429
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=87.43 E-value=1.4 Score=32.16 Aligned_cols=44 Identities=18% Similarity=0.359 Sum_probs=34.4
Q ss_pred CCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHH
Confidence 67899999999763 5667777776653 79999999988887754
No 430
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.42 E-value=3.9 Score=29.52 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=31.9
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSS 70 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a 70 (139)
.+++++++|-.|+ |.|.....+++..+ ++|++++.+++.++.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH
Confidence 3678899999997 34555556666554 3899999998877776
No 431
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=87.40 E-value=4.7 Score=27.74 Aligned_cols=84 Identities=10% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 6 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 6 QGKVALITGA-SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA------GAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4567777664 5666666666552 2348999999987777665555431 14678888888762 221111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 79 VEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123578999988753
No 432
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=87.39 E-value=4.8 Score=27.84 Aligned_cols=85 Identities=13% Similarity=0.128 Sum_probs=50.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
+++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++.+.+.+.... ..++.++..|+.+. +..+..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 6 SGKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-----GVRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4567776664 5666666666552 23489999999877666555543310 14678888888762 221111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 80 ~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 80 RSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123468999988753
No 433
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=87.36 E-value=4.1 Score=28.55 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=49.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++++|--| |+|..+..+++.+ ....+|+..+.+++.++...+.+ ..++.++..|+.+. +..+..
T Consensus 26 ~gk~vlVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 26 TGRKALVTG-ATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---------GKDVFVFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceEEEEeecCCHHHHHHHHHHH
Confidence 456677665 4566666666655 22348999999987766554432 14678888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 96 ~~~~g~iD~lvnnAg~ 111 (266)
T 3grp_A 96 EREMEGIDILVNNAGI 111 (266)
T ss_dssp HHHHTSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123579999998763
No 434
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.29 E-value=0.78 Score=33.56 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=35.8
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++.+||-+|+|. |..+..+++..+ ++|++++.+++..+.+++
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHh
Confidence 368899999999864 677777787765 389999999888877755
No 435
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=87.19 E-value=5.4 Score=27.92 Aligned_cols=85 Identities=14% Similarity=0.142 Sum_probs=50.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeC-CHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEH-VPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~-~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|--| |+|..+..+++.+- ...+|+..+. ++...+...+.+... ..++.++..|+.+. +..+..
T Consensus 27 ~~k~vlVTG-as~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~d~~~v~~~~~~ 99 (269)
T 4dmm_A 27 TDRIALVTG-ASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA------GGEAFAVKADVSQESEVEALFAA 99 (269)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHH
Confidence 456666655 55666666666552 2348888887 666666655555441 14688888898762 222111
Q ss_pred -hccCCceeEEecCcccc
Q psy5757 104 -MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~~ 120 (139)
....+.+|+++.|....
T Consensus 100 ~~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 11235789999987643
No 436
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=87.17 E-value=5.7 Score=27.47 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=50.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--h
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE--L 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~--~ 103 (139)
.++.+|-.| |+|..+..+++.+ ....+|+.++.+++..+...+.+. .++.++..|+.+. +..+. .
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---------PAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CCceEEEeeCCCHHHHHHHHHHH
Confidence 456777766 4566666666554 223489999999876665554431 4677888887751 22111 1
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 77 ~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 77 VEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHSSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1234579999998764
No 437
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=87.15 E-value=5.8 Score=27.50 Aligned_cols=84 Identities=8% Similarity=0.083 Sum_probs=51.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+- ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK------GVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHH
Confidence 4567776665 5566666666552 2348999999987776665555441 14678888887752 111111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 1123578999998754
No 438
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=87.12 E-value=5.2 Score=27.75 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=50.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEE-eCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGI-EHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~-d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
+++.+|--| |+|..+..+++.+- ...+|+.. +.+++..+.+.+.+... ..++.++..|+.+. +..+..
T Consensus 3 ~~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 3 QNKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL------GVKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 345666555 55666666666552 23477775 78877777666665541 14688888898762 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+++|+++.|...
T Consensus 76 ~~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 76 IDETFGRLDVFVNNAAS 92 (258)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1123578999998853
No 439
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=87.08 E-value=3.6 Score=28.99 Aligned_cols=83 Identities=12% Similarity=0.092 Sum_probs=50.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++...+.+.. ..++.++..|+.+. +..+..
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-------YGDCQAIPADLSSEAGARRLAQAL 99 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-------SSCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCceEEEEeeCCCHHHHHHHHHHH
Confidence 4567776664 5666666666552 234899999998766655544432 13677788887762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 100 ~~~~g~iD~lvnnAg~ 115 (276)
T 2b4q_A 100 GELSARLDILVNNAGT 115 (276)
T ss_dssp HHHCSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 1124578999988763
No 440
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=87.05 E-value=4.8 Score=27.79 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=47.8
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHH--HHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQL--VNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~--~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
++.+|-.|+ +|..+..+++.+. ...+|+.++.+++. ++...+.+... ..++.++..|+.+. +..+..
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~ 74 (258)
T 3a28_C 2 SKVAMVTGG-AQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA------DQKAVFVGLDVTDKANFDSAIDE 74 (258)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHH
Confidence 356666664 5556666655441 12389999988765 55544444331 14678888888752 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 75 ~~~~~g~iD~lv~nAg~ 91 (258)
T 3a28_C 75 AAEKLGGFDVLVNNAGI 91 (258)
T ss_dssp HHHHHTCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 1123578999988764
No 441
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.03 E-value=4.7 Score=27.69 Aligned_cols=83 Identities=14% Similarity=0.112 Sum_probs=51.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC--CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN--STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~--~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
+++++|-.| |+|..+..+++.+- ...+|+.++.++...+.+.+.+... ..++.++..|+.+. +..+..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE------GLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc------CCeeEEEECCCCCHHHHHHHHHH
Confidence 345666555 67777777777652 2358999999887766665555441 14678888887751 222111
Q ss_pred -hccCCceeEEecCcc
Q psy5757 104 -MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~ 118 (139)
....+.+|++|.+..
T Consensus 76 ~~~~~g~id~li~~Ag 91 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAG 91 (276)
T ss_dssp HHHHHSSEEEEEECCC
T ss_pred HHHhcCCCCEEEECCc
Confidence 112346999998875
No 442
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=86.98 E-value=4.2 Score=28.24 Aligned_cols=82 Identities=16% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++++|-.| |+|..+..+++.+- ...+|+.++.++...+...+.+.. ..++.++..|+.+. +..+..
T Consensus 15 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 15 QDKVAIITG-GAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-------PDVISFVHCDVTKDEDVRNLVDTT 86 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-------TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-------CCceEEEECCCCCHHHHHHHHHHH
Confidence 456777766 46677777766552 234899999887665544333322 13688888998761 222111
Q ss_pred hccCCceeEEecCcc
Q psy5757 104 MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~ 118 (139)
....+.+|++|.+..
T Consensus 87 ~~~~~~id~li~~Ag 101 (278)
T 2bgk_A 87 IAKHGKLDIMFGNVG 101 (278)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 111346899998775
No 443
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=86.97 E-value=5.9 Score=27.47 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=51.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++.+.+.+... ....++.++..|+.+. +..+..
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET----APDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----CTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCceEEEEEccCCCHHHHHHHHHHH
Confidence 4567777665 5666666666552 2348999999987776665554331 0014678888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 87 ~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 87 TERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1123568999988753
No 444
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=86.95 E-value=5.2 Score=27.14 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=51.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.| |+|..+..+++.+- ...+|+.++.+++..+...+.+.... ..++.++..|+.+. +..+..
T Consensus 6 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 6 QGKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-----GVKAHGVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-----CCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence 456666555 56777777776552 23489999999877666555443200 14678888887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 80 ~~~~~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGI 95 (248)
T ss_dssp HHHSSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 1123568999988753
No 445
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=86.87 E-value=4.8 Score=28.42 Aligned_cols=89 Identities=9% Similarity=0.137 Sum_probs=52.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+...... ....++.++..|+.+. +..+..
T Consensus 17 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTG-GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP-TKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT-TCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc-cCCccEEEEecCCCCHHHHHHHHHHH
Confidence 456777766 56777777766552 2348999999987776665554331000 0024688888998762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 95 ~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 95 LDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123468999998763
No 446
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.73 E-value=4.3 Score=27.67 Aligned_cols=72 Identities=8% Similarity=-0.092 Sum_probs=45.3
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
..++++-+|+ |..+..+++.+...+.++.+|.+++.++.+. . ++.++.+|..+ ...+ ..+..+
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~----~---------~~~~i~gd~~~-~~~l-~~a~i~ 70 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR----S---------GANFVHGDPTR-VSDL-EKANVR 70 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH----T---------TCEEEESCTTC-HHHH-HHTTCT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh----c---------CCeEEEcCCCC-HHHH-HhcCcc
Confidence 4457887776 7899999998854334889999987765543 2 35677888765 2222 122344
Q ss_pred ceeEEecCc
Q psy5757 109 RYDFLPHAP 117 (139)
Q Consensus 109 ~~D~vi~~~ 117 (139)
..|+++...
T Consensus 71 ~ad~vi~~~ 79 (234)
T 2aef_A 71 GARAVIVDL 79 (234)
T ss_dssp TCSEEEECC
T ss_pred hhcEEEEcC
Confidence 567776543
No 447
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=86.71 E-value=4.4 Score=28.79 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=51.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+- ...+|+.++.+++.++.+.+.+... ..++.++..|+.+. +..+..
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA------GINAHGYVCDVTDEDGIQAMVAQI 105 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHH
Confidence 4567776664 5666666666552 2348999999987776665555431 14677888887752 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 106 ~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 106 ESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHTCCCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCc
Confidence 1134579999988753
No 448
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=86.70 E-value=1.9 Score=31.30 Aligned_cols=71 Identities=8% Similarity=-0.055 Sum_probs=46.9
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCCc
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDR 109 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~~ 109 (139)
.++++-+| .|..+..+++.....+.++.+|.+++.++ +++ .++.++.+|..+ .+.+ ..+..+.
T Consensus 115 ~~~viI~G--~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~------------~~~~~i~gd~~~-~~~L-~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICG--WSESTLECLRELRGSEVFVLAEDENVRKK-VLR------------SGANFVHGDPTR-VSDL-EKANVRG 177 (336)
T ss_dssp -CEEEEES--CCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH------------TTCEEEESCTTS-HHHH-HHTCSTT
T ss_pred cCCEEEEC--CcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh------------CCcEEEEeCCCC-HHHH-HhcChhh
Confidence 34677766 48888999988743334899999998776 432 356788899776 2222 2334556
Q ss_pred eeEEecCc
Q psy5757 110 YDFLPHAP 117 (139)
Q Consensus 110 ~D~vi~~~ 117 (139)
.|.++...
T Consensus 178 a~~vi~~~ 185 (336)
T 1lnq_A 178 ARAVIVDL 185 (336)
T ss_dssp EEEEEECC
T ss_pred ccEEEEcC
Confidence 78877644
No 449
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=86.70 E-value=3.3 Score=31.17 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=47.7
Q ss_pred CeEEEEcccCChhHHHHHHHcCCC----ceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchh--hhHHHhhh
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNST----GQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIK--RIETVELM 104 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~----~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~~ 104 (139)
++|+-+|| |..+..+++.+... .+++..+.+++..+...+.+... ...++..+..|+.+ .+..+...
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~-----~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK-----GYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT-----TCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh-----cCCceEEEEecCCCHHHHHHHHHh
Confidence 36888887 56777777765322 27899999988777665555430 01357777778654 12222111
Q ss_pred ccCCceeEEecCcc
Q psy5757 105 MKFDRYDFLPHAPA 118 (139)
Q Consensus 105 ~~~~~~D~vi~~~~ 118 (139)
..+|+|+.+..
T Consensus 75 ---~~~DvVin~ag 85 (405)
T 4ina_A 75 ---VKPQIVLNIAL 85 (405)
T ss_dssp ---HCCSEEEECSC
T ss_pred ---hCCCEEEECCC
Confidence 13798887754
No 450
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=86.70 E-value=5.4 Score=27.24 Aligned_cols=80 Identities=8% Similarity=-0.007 Sum_probs=49.0
Q ss_pred CCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--h
Q psy5757 30 NSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL--M 104 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~--~ 104 (139)
++.+|-.|+ +|..+..+++.+ ....+|+.++.+++.++...+.+. .++.++..|+.+. +..+.. .
T Consensus 3 ~k~vlVTGa-s~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 3 LGHIIVTGA-GSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---------NAVIGIVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------CCceEEECCCCCHHHHHHHHHHHH
Confidence 345666664 455666666554 223489999999887776655542 3578888888762 221111 1
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
...+.+|+++.|...
T Consensus 73 ~~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 73 EWGGLPELVLHCAGT 87 (235)
T ss_dssp HHHCSCSEEEEECCC
T ss_pred HhcCCCcEEEECCCC
Confidence 123578999988764
No 451
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=86.60 E-value=6.3 Score=27.55 Aligned_cols=79 Identities=11% Similarity=0.125 Sum_probs=49.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELM- 104 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~- 104 (139)
.++.+|-.|+ +|..+..+++.+ ....+|+.++.+++.++.+.+.+ ..++.++..|+.+. +..+...
T Consensus 29 ~~k~vlVTGa-s~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 29 EGASAIVSGG-AGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---------GNRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp TTEEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---------CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4556776665 555666666554 22348999999987776665544 14688888888762 2222111
Q ss_pred ccCCceeEEecCc
Q psy5757 105 MKFDRYDFLPHAP 117 (139)
Q Consensus 105 ~~~~~~D~vi~~~ 117 (139)
...+.+|+++.+.
T Consensus 99 ~~~~~id~lv~~a 111 (281)
T 3ppi_A 99 NQLGRLRYAVVAH 111 (281)
T ss_dssp TTSSEEEEEEECC
T ss_pred HHhCCCCeEEEcc
Confidence 2345789999883
No 452
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=86.53 E-value=4.1 Score=28.03 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=45.7
Q ss_pred CeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--hc
Q psy5757 31 SKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL--MM 105 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~--~~ 105 (139)
+.+|-.| |+|..+..+++.+ ....+|+.++.+++..+...+. ..++.++..|+.+. +..+.. ..
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 71 (247)
T 3dii_A 3 RGVIVTG-GGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----------RPNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----------CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cccCCeEEeeCCCHHHHHHHHHHHHH
Confidence 4566655 4555666666654 1234899999997655544332 14567888888762 222111 11
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
..+.+|+++.|...
T Consensus 72 ~~g~id~lv~nAg~ 85 (247)
T 3dii_A 72 KLQRIDVLVNNACR 85 (247)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 23579999998853
No 453
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.53 E-value=3.9 Score=24.98 Aligned_cols=74 Identities=11% Similarity=0.122 Sum_probs=40.9
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhccCC
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFD 108 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 108 (139)
+++|+-+|+ |..+..+++.+. ...+++.+|.+++.++.+++. ..+.++.+|..+ ...+. .....
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-----------~~~~~~~~d~~~-~~~l~-~~~~~ 68 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-----------IDALVINGDCTK-IKTLE-DAGIE 68 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------CSSEEEESCTTS-HHHHH-HTTTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-----------cCcEEEEcCCCC-HHHHH-HcCcc
Confidence 467888766 666666665542 123899999998766554332 133455666443 22111 11234
Q ss_pred ceeEEecCcc
Q psy5757 109 RYDFLPHAPA 118 (139)
Q Consensus 109 ~~D~vi~~~~ 118 (139)
.+|+|+....
T Consensus 69 ~~d~vi~~~~ 78 (140)
T 1lss_A 69 DADMYIAVTG 78 (140)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEEeeC
Confidence 5787766543
No 454
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=86.44 E-value=3.7 Score=28.41 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=50.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELM- 104 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~- 104 (139)
.++++|-.| |+|..+..+++.+- ...+|+.++.++..++...+.+... ..++.++..|+.+. +..+...
T Consensus 13 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 13 KAKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------GFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeeEEEECCCCCHHHHHHHHHHH
Confidence 456676655 56777777776552 2348999999887666655555431 14678888887752 2221111
Q ss_pred -ccC-CceeEEecCcc
Q psy5757 105 -MKF-DRYDFLPHAPA 118 (139)
Q Consensus 105 -~~~-~~~D~vi~~~~ 118 (139)
... +.+|++|.+..
T Consensus 86 ~~~~~~~id~li~~Ag 101 (266)
T 1xq1_A 86 SSMFGGKLDILINNLG 101 (266)
T ss_dssp HHHHTTCCSEEEEECC
T ss_pred HHHhCCCCcEEEECCC
Confidence 011 56899998875
No 455
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=86.30 E-value=5.2 Score=28.14 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=49.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|++ +..+..+++.+ ....+|+.++.+++.++...+.. ..++.++..|+.+. +..+..
T Consensus 4 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~ 73 (281)
T 3zv4_A 4 TGEVALITGGA-SGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---------GGNAVGVVGDVRSLQDQKRAAERC 73 (281)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---------BTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 45677777654 55555555554 12348999999987666544432 14678888888762 121111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 74 ~~~~g~iD~lvnnAg~ 89 (281)
T 3zv4_A 74 LAAFGKIDTLIPNAGI 89 (281)
T ss_dssp HHHHSCCCEEECCCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1124578999999864
No 456
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=86.21 E-value=3.6 Score=28.38 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=49.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|++ |..+..+++.+ ....+|+.++.+++.++...+.+ ..++.++..|+.+. +.++..
T Consensus 8 ~~k~vlITGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 8 EGKVALITGAG-SGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---------GDAALAVAADISKEADVDAAVEAA 77 (261)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------CTTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---------CCceEEEEecCCCHHHHHHHHHHH
Confidence 45677777765 45555555544 12348999999987776665543 14678888887762 121111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 78 ~~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 78 LSKFGKVDILVNNAGI 93 (261)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCcc
Confidence 1123468999998764
No 457
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.19 E-value=6.5 Score=27.82 Aligned_cols=84 Identities=10% Similarity=0.063 Sum_probs=48.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHH-HHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQL-VNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVE-- 102 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~-~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-- 102 (139)
+++.+|--|+ +|..+..+++.+- ...+|+.++.++.. .+.+.+..... ..++.++..|+.+. +..+.
T Consensus 46 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGG-DSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE------GVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT------TCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHH
Confidence 4567777665 5556666666552 23488899887653 33344433331 14788888998762 12211
Q ss_pred hhccCCceeEEecCccc
Q psy5757 103 LMMKFDRYDFLPHAPAE 119 (139)
Q Consensus 103 ~~~~~~~~D~vi~~~~~ 119 (139)
.....+.+|++|.|...
T Consensus 119 ~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHHSSCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11124578999988653
No 458
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=86.04 E-value=3.4 Score=28.42 Aligned_cols=81 Identities=11% Similarity=0.077 Sum_probs=46.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHcCC-Cce-EEEEeCCHH--HHHHHHHHHHhhccccccCCcEEEEEccchhh---hHHH
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMNS-TGQ-VIGIEHVPQ--LVNSSIQNILHSNARLLTDGHIKFVALGMIKR---IETV 101 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~~-~~~-v~~~d~~~~--~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~ 101 (139)
+++++|-.|+ +|..+..+++.+-. ..+ |+.++.++. .++...+.. ...++.++..|+.+. +.++
T Consensus 4 ~~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~--------~~~~~~~~~~D~~~~~~~~~~~ 74 (254)
T 1sby_A 4 TNKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN--------PKVNITFHTYDVTVPVAESKKL 74 (254)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC--------TTSEEEEEECCTTSCHHHHHHH
T ss_pred CCcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC--------CCceEEEEEEecCCChHHHHHH
Confidence 4567877775 67777777776632 234 888887752 222222111 114678888888752 2221
Q ss_pred hh--hccCCceeEEecCcc
Q psy5757 102 EL--MMKFDRYDFLPHAPA 118 (139)
Q Consensus 102 ~~--~~~~~~~D~vi~~~~ 118 (139)
.. ....+.+|++|.|..
T Consensus 75 ~~~~~~~~g~id~lv~~Ag 93 (254)
T 1sby_A 75 LKKIFDQLKTVDILINGAG 93 (254)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCc
Confidence 11 112346899998875
No 459
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=86.02 E-value=6 Score=26.98 Aligned_cols=81 Identities=9% Similarity=0.083 Sum_probs=48.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcE-EEEEccchhh--hHHHhhh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHI-KFVALGMIKR--IETVELM 104 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i-~~~~~d~~~~--~~~~~~~ 104 (139)
.++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++...+.+. .++ .++..|+.+. +..+...
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~ 79 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---------AAVAARIVADVTDAEAMTAAAAE 79 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------ccceeEEEEecCCHHHHHHHHHH
Confidence 456777666 55677777766552 23489999998776655544431 345 7788887752 2221110
Q ss_pred -ccCCceeEEecCccc
Q psy5757 105 -MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 -~~~~~~D~vi~~~~~ 119 (139)
...+.+|++|.+...
T Consensus 80 ~~~~~~id~li~~Ag~ 95 (254)
T 2wsb_A 80 AEAVAPVSILVNSAGI 95 (254)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhhCCCcEEEECCcc
Confidence 013568999988753
No 460
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=85.97 E-value=6.2 Score=26.72 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=47.7
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhh-cc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELM-MK 106 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~ 106 (139)
+++++|-.| |+|..+..+++.+. ...+|+.++.++...+...+.. .+++++..|+.+ ...+..- ..
T Consensus 6 ~~~~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~D~~~-~~~~~~~~~~ 73 (244)
T 1cyd_A 6 SGLRALVTG-AGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----------PGIEPVCVDLGD-WDATEKALGG 73 (244)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------TTCEEEECCTTC-HHHHHHHHTT
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------cCCCcEEecCCC-HHHHHHHHHH
Confidence 456777665 56777777766552 2348999999876554433221 345667888776 2222111 12
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
.+.+|+++.+...
T Consensus 74 ~~~id~vi~~Ag~ 86 (244)
T 1cyd_A 74 IGPVDLLVNNAAL 86 (244)
T ss_dssp CCCCSEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 4568999988763
No 461
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=85.96 E-value=6.1 Score=27.33 Aligned_cols=87 Identities=14% Similarity=0.044 Sum_probs=50.9
Q ss_pred CCCCeEEEEcccCC-hhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh
Q psy5757 28 NENSKVLEIGSGSG-YLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL 103 (139)
Q Consensus 28 ~~~~~iLdiG~G~G-~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~ 103 (139)
..++++|-.|++.+ +.+..+++.+ ....+|+.++.++...+.+.+.... ....++.++..|+.+. +..+..
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGT-----LDRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHT-----SSSCCCEEEECCCSSSHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHh-----cCCCCceEEeCCCCCHHHHHHHHH
Confidence 35678888887632 2444444444 1234899998887655555555444 1124788888888761 222211
Q ss_pred --hccCCceeEEecCccc
Q psy5757 104 --MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 --~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.+...
T Consensus 80 ~~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHhCCeeEEEEcccc
Confidence 1123578999988764
No 462
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=85.87 E-value=7.2 Score=27.37 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCeEEEEcccCChhHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--h
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNS-TGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL--M 104 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~-~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~--~ 104 (139)
++.+|-.| |+|..+..+++.+.. ..+|+.++.+++..+.+.+.+... ..++.++..|+.+. +..+.. .
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF------GYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc------CCceeEEECCCCCHHHHHHHHHHHH
Confidence 45676665 567788888877632 347888888877666655555431 14678888887762 222111 1
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
...+.+|++|.+...
T Consensus 117 ~~~~~id~li~~Ag~ 131 (285)
T 2c07_A 117 TEHKNVDILVNNAGI 131 (285)
T ss_dssp HHCSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 124568999988763
No 463
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.73 E-value=6 Score=28.41 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=32.8
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-.|+ |.|.....+++..+ ++|++++.+++..+.+++
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH
Confidence 3678899999984 34555666666554 389999999887777755
No 464
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=85.66 E-value=7.4 Score=27.31 Aligned_cols=81 Identities=7% Similarity=0.028 Sum_probs=48.7
Q ss_pred CeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhh--c
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELM--M 105 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~--~ 105 (139)
+.+|-.|+ +|..+..+++.+. ...+|+.++.+++.++...+.+.. ..++.++..|+.+. +..+... .
T Consensus 22 k~vlVTGa-s~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~ 93 (272)
T 2nwq_A 22 STLFITGA-TSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-------KTRVLPLTLDVRDRAAMSAAVDNLPE 93 (272)
T ss_dssp CEEEESST-TTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-------TSCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred cEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56666664 4555555555441 234899999998776665544422 13678888888762 2222111 1
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
..+.+|++|.|...
T Consensus 94 ~~g~iD~lvnnAG~ 107 (272)
T 2nwq_A 94 EFATLRGLINNAGL 107 (272)
T ss_dssp GGSSCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 23568999998754
No 465
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.58 E-value=4.4 Score=28.52 Aligned_cols=84 Identities=18% Similarity=0.098 Sum_probs=51.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELM- 104 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~- 104 (139)
.++.+|--| |+|..+..+++.+ ....+|+.++.+++..+.+.+.+... ..++.++..|+.+. ...+...
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 32 RGRTALVTG-SSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS------GGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT------TCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHH
Confidence 456677655 5566666666655 22348999999887777666665441 15688888887752 1221110
Q ss_pred ccCCceeEEecCccc
Q psy5757 105 MKFDRYDFLPHAPAE 119 (139)
Q Consensus 105 ~~~~~~D~vi~~~~~ 119 (139)
...+.+|+++.|...
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 105 EAIAPVDILVINASA 119 (275)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 011578999988864
No 466
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=85.57 E-value=6.9 Score=26.93 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=49.8
Q ss_pred CeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--hc
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL--MM 105 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~--~~ 105 (139)
+.+|-.| |+|..+..+++.+. ...+|+.++.+++..+...+.+... ..++.++..|+.+. +..+.. ..
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 3 KVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA------GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4566655 45666666666552 2348999999987766665555431 14677888888762 222111 11
Q ss_pred cCCceeEEecCccc
Q psy5757 106 KFDRYDFLPHAPAE 119 (139)
Q Consensus 106 ~~~~~D~vi~~~~~ 119 (139)
..+.+|++|.|...
T Consensus 76 ~~g~id~lv~nAg~ 89 (256)
T 1geg_A 76 TLGGFDVIVNNAGV 89 (256)
T ss_dssp HTTCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 24579999998753
No 467
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=85.57 E-value=8.2 Score=27.77 Aligned_cols=45 Identities=16% Similarity=0.205 Sum_probs=33.3
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.+++++++|-.|+ |.|.....+++..+ ++|++++.+++.++.+++
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 3678899999985 45556666666654 489999999877777654
No 468
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.56 E-value=5.2 Score=28.03 Aligned_cols=86 Identities=15% Similarity=0.199 Sum_probs=51.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.| |+|..+..+++.+- ...+|+.++.+++.++.+.+.+.. +. ...++.++..|+.+. +..+..
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (280)
T 1xkq_A 5 SNKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV----SEKQVNSVVADVTTEDGQDQIINS 79 (280)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC----CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC----CCcceEEEEecCCCHHHHHHHHHH
Confidence 345666655 56666666666552 234899999998777666555543 10 002688888998762 121111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 80 ~~~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 80 TLKQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 1123568999998753
No 469
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=85.55 E-value=4.2 Score=28.00 Aligned_cols=81 Identities=11% Similarity=0.097 Sum_probs=49.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|++ |..+..+++.+ ....+|+.++.+++.++.+.+.+ ..++.++..|+.+. +..+..
T Consensus 5 ~gk~vlVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~ 74 (247)
T 3rwb_A 5 AGKTALVTGAA-QGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---------GKKARAIAADISDPGSVKALFAEI 74 (247)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---------CTTEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceEEEEcCCCCHHHHHHHHHHH
Confidence 45677777654 55555555544 22348999999987766655443 14677888887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 75 ~~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 75 QALTGGIDILVNNASI 90 (247)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHCCCCCEEEECCCC
Confidence 1123578999988864
No 470
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=85.47 E-value=7.1 Score=26.92 Aligned_cols=79 Identities=11% Similarity=0.102 Sum_probs=48.0
Q ss_pred CeEEEEcccCChhHHHHHHHcC---CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 31 SKVLEIGSGSGYLTNMISELMN---STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~---~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
+.+|-.| |+|..+..+++.+- ....|+..+.+++.++...+.+. .++.++..|+.+. +..+..
T Consensus 3 k~~lVTG-as~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 72 (254)
T 3kzv_A 3 KVILVTG-VSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG---------DRFFYVVGDITEDSVLKQLVNAA 72 (254)
T ss_dssp CEEEECS-TTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG---------GGEEEEESCTTSHHHHHHHHHHH
T ss_pred CEEEEEC-CCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC---------CceEEEECCCCCHHHHHHHHHHH
Confidence 4556555 45566666665541 23488889999877766555431 4678888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+++|+++.|...
T Consensus 73 ~~~~g~id~lvnnAg~ 88 (254)
T 3kzv_A 73 VKGHGKIDSLVANAGV 88 (254)
T ss_dssp HHHHSCCCEEEEECCC
T ss_pred HHhcCCccEEEECCcc
Confidence 1124578999988764
No 471
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=85.46 E-value=6.7 Score=26.61 Aligned_cols=79 Identities=15% Similarity=0.173 Sum_probs=46.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhh-cc
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELM-MK 106 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~ 106 (139)
+++++|-.| |+|..+..+++.+. ...+|+.++.++..++...+.. .+++++..|+.+ .+.+..- ..
T Consensus 6 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~D~~~-~~~~~~~~~~ 73 (244)
T 3d3w_A 6 AGRRVLVTG-AGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----------PGIEPVCVDLGD-WEATERALGS 73 (244)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------TTCEEEECCTTC-HHHHHHHHTT
T ss_pred CCcEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------CCCCEEEEeCCC-HHHHHHHHHH
Confidence 456777665 45666666666552 2348999998876554433221 345566788776 2222111 12
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
.+.+|++|.+...
T Consensus 74 ~~~id~vi~~Ag~ 86 (244)
T 3d3w_A 74 VGPVDLLVNNAAV 86 (244)
T ss_dssp CCCCCEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 4568999988763
No 472
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=85.41 E-value=7.3 Score=27.16 Aligned_cols=84 Identities=13% Similarity=0.091 Sum_probs=48.8
Q ss_pred CCCeEEEEccc-CChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSG-SGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G-~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.|++ +|..+..+++.+. ...+|+.++.++. .+...+.+.... .++.++..|+.+. +..+..
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------~~~~~~~~D~~~~~~v~~~~~~ 77 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL------NSPYVYELDVSKEEHFKSLYNS 77 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT------TCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc------CCcEEEEcCCCCHHHHHHHHHH
Confidence 45678888875 3777777777662 2458999998865 222222222211 2366777887751 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 78 ~~~~~g~id~lv~nAg~ 94 (275)
T 2pd4_A 78 VKKDLGSLDFIVHSVAF 94 (275)
T ss_dssp HHHHTSCEEEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 1124579999998864
No 473
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=85.37 E-value=1.9 Score=32.71 Aligned_cols=46 Identities=17% Similarity=0.075 Sum_probs=35.9
Q ss_pred CeEEEEcccCChhHHHHHHHcCCCce----EEEEeCCHHHHHHHHHHHHh
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNSTGQ----VIGIEHVPQLVNSSIQNILH 76 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~~~~----v~~~d~~~~~~~~a~~~~~~ 76 (139)
.+++|+.||.|+.+..+-+...+--. |.++|+++.+++.-+.+...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 48999999999999999876521013 88999999988877777643
No 474
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=85.33 E-value=6.3 Score=27.72 Aligned_cols=85 Identities=13% Similarity=0.131 Sum_probs=49.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCH-HHHHHHHHHHHhhccccccCCcEEEEEccchh----h--hHH
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVP-QLVNSSIQNILHSNARLLTDGHIKFVALGMIK----R--IET 100 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~-~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~----~--~~~ 100 (139)
.++.+|-.| |+|..+..+++.+- ...+|+.++.++ +..+.+.+.+.... ..++.++..|+.+ . +..
T Consensus 22 ~~k~~lVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 22 EAPAAVVTG-AAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-----SNTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp CCCEEEETT-CSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-----TTCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-----CCceEEEEeecCCccCCHHHHHH
Confidence 456666655 45666666665541 124899999887 66665555543100 1467888888765 1 222
Q ss_pred Hhh--hccCCceeEEecCccc
Q psy5757 101 VEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 101 ~~~--~~~~~~~D~vi~~~~~ 119 (139)
+.. ....+.+|++|.|...
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 111 1123578999998764
No 475
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=85.24 E-value=5.8 Score=27.88 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=47.9
Q ss_pred CCCeEEEEcccC-ChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGS-GYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~-G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.|+++ |..+..+++.+. ...+|+.++.++...+.++ .+... ..++.++..|+.+. +..+..
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~l~~~------~~~~~~~~~Dl~~~~~v~~~~~~ 92 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVR-EIAKG------FGSDLVVKCDVSLDEDIKNLKKF 92 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHH------TTCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHh------cCCeEEEEcCCCCHHHHHHHHHH
Confidence 456788877752 667777766552 2348999998875222222 22221 12356777887751 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 93 ~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 93 LEENWGSLDIIVHSIAY 109 (285)
T ss_dssp HHHHTSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1124578999998764
No 476
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=85.18 E-value=8.9 Score=27.82 Aligned_cols=90 Identities=7% Similarity=0.036 Sum_probs=58.1
Q ss_pred CCeEEEEcccCChhHHHHHHHcCCCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhhhH-HHhhh-cc
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKRIE-TVELM-MK 106 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~-~~~~~-~~ 106 (139)
...||++|||.=.....+. .+...+++-+| .|..+...++.+.. +. ....+.+++..|+.+.+. .+... ..
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~---~~~~~~~~v~~Dl~d~~~~~l~~~g~d 176 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGV---TPTADRREVPIDLRQDWPPALRSAGFD 176 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTC---CCSSEEEEEECCTTSCHHHHHHHTTCC
T ss_pred CCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCC---CCCCCeEEEecchHhhHHHHHHhccCC
Confidence 3579999999877644443 12235888888 58889988888864 21 124678899999886443 22111 12
Q ss_pred CCceeEEecCccccccccc
Q psy5757 107 FDRYDFLPHAPAESWMNIP 125 (139)
Q Consensus 107 ~~~~D~vi~~~~~~~~~~p 125 (139)
.+.--++++-.++|++...
T Consensus 177 ~~~Pt~~i~Egvl~Yl~~~ 195 (310)
T 2uyo_A 177 PSARTAWLAEGLLMYLPAT 195 (310)
T ss_dssp TTSCEEEEECSCGGGSCHH
T ss_pred CCCCEEEEEechHhhCCHH
Confidence 2345677777778887753
No 477
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=84.92 E-value=4.3 Score=28.28 Aligned_cols=84 Identities=13% Similarity=0.008 Sum_probs=47.6
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+. ...+|+.++.++...+...+.+... ..++.++..|+.+. +.++..
T Consensus 33 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~ 105 (279)
T 3ctm_A 33 KGKVASVTGS-SGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY------GVHSKAYKCNISDPKSVEETISQQ 105 (279)
T ss_dssp TTCEEEETTT-TSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH------CSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcceEEEeecCCHHHHHHHHHHH
Confidence 4567776664 5555555555441 1238999887765554444443331 14678888887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.+...
T Consensus 106 ~~~~g~id~li~~Ag~ 121 (279)
T 3ctm_A 106 EKDFGTIDVFVANAGV 121 (279)
T ss_dssp HHHHSCCSEEEECGGG
T ss_pred HHHhCCCCEEEECCcc
Confidence 1123468999988764
No 478
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=84.87 E-value=6.5 Score=27.59 Aligned_cols=81 Identities=11% Similarity=0.080 Sum_probs=49.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.| |+|..+..+++.+ ....+|+.++.+++.++.+.+.+. .++.++..|+.+. +..+..
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~ 96 (272)
T 4dyv_A 27 GKKIAIVTG-AGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---------DDALCVPTDVTDPDSVRALFTAT 96 (272)
T ss_dssp -CCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---------SCCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CCeEEEEecCCCHHHHHHHHHHH
Confidence 345566554 5566666666655 223489999999877666554431 4677888888762 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 97 ~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 97 VEKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123579999998764
No 479
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=84.79 E-value=6.2 Score=26.84 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=49.7
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHH-HhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNI-LHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~-~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
++.+|-.| |+|..+..+++.+. ...+|+.++.++..++...+.+ ... ..++.++..|+.+. +.++..
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 74 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY------ADKVLRVRADVADEGDVNAAIAAT 74 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHH
Confidence 35566666 55777777766552 2348999999987766655544 221 14688888888761 222111
Q ss_pred hccCCceeEEecCcc
Q psy5757 104 MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~ 118 (139)
....+.+|+++.+..
T Consensus 75 ~~~~~~id~li~~Ag 89 (250)
T 2cfc_A 75 MEQFGAIDVLVNNAG 89 (250)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 112346899998875
No 480
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=84.72 E-value=7.6 Score=28.05 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcccCC-hhHHHHHHHcCCCceEEEEeCCHHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGSG-YLTNMISELMNSTGQVIGIEHVPQLVNSSIQN 73 (139)
Q Consensus 27 ~~~~~~iLdiG~G~G-~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~~ 73 (139)
.+++.+||-+|+|.. .....+++... .++|+++|.+++.++.+++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhhc
Confidence 678999999998854 45555555442 35999999999877766553
No 481
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=84.72 E-value=4.2 Score=28.46 Aligned_cols=82 Identities=13% Similarity=0.165 Sum_probs=49.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|+ +|..+..+++.+- ...+|+.++.+++.++.+.+.+. .++.++..|+.+. +.++..
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 79 (271)
T 3tzq_B 10 ENKVAIITGA-CGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG---------RGAVHHVVDLTNEVSVRALIDFT 79 (271)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC---------TTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---------CCeEEEECCCCCHHHHHHHHHHH
Confidence 4567776665 4555656555541 23489999988776665554431 4567788887752 222111
Q ss_pred hccCCceeEEecCcccc
Q psy5757 104 MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~~ 120 (139)
....+.+|+++.|....
T Consensus 80 ~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 80 IDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 11235789999987643
No 482
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=84.69 E-value=2.2 Score=28.28 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=32.7
Q ss_pred HHHHHhcccC-CCCCeEEEEcccCChhHHHHHHHcCCCceEEEEeC
Q psy5757 18 TYLSIIQPHL-NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62 (139)
Q Consensus 18 ~~~~~l~~~~-~~~~~iLdiG~G~G~~~~~l~~~~~~~~~v~~~d~ 62 (139)
.++++..... .-...|||+|-|+|.+---+.+.+ |...++.+|-
T Consensus 28 ~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR 72 (174)
T 3iht_A 28 ACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHV-QGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHC-CSSCEEEEES
T ss_pred HHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhC-CCCcEEEEEe
Confidence 3444443323 234579999999999999999999 4669999993
No 483
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=84.59 E-value=4.7 Score=29.62 Aligned_cols=46 Identities=15% Similarity=0.290 Sum_probs=34.7
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH
Confidence 367889999999763 5667777776642 279999999888877754
No 484
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=84.50 E-value=2.7 Score=29.06 Aligned_cols=82 Identities=10% Similarity=0.218 Sum_probs=43.2
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|--|++ |..+..+++.+ ....+|+.++.+++..+.+.+.+ ..++.++..|+.+. +..+..
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---------GAAVRFRNADVTNEADATAALAFA 75 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSCC---------------------CEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---------CCceEEEEccCCCHHHHHHHHHHH
Confidence 45677776654 55556665554 12348999998876655444332 14577888887762 222111
Q ss_pred hccCCceeEEecCcccc
Q psy5757 104 MMKFDRYDFLPHAPAES 120 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~~ 120 (139)
....+.+|+++.|....
T Consensus 76 ~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 76 KQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 11245799999987643
No 485
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=84.50 E-value=7 Score=26.98 Aligned_cols=85 Identities=9% Similarity=0.008 Sum_probs=50.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+- ...+|+.++.+++..+.+.+.+.... ...++.++..|+.+. +..+..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 6 QGKLAVVTAG-SSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV----SGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CCCeEEEEEccCCCHHHHHHHHHHH
Confidence 4567776664 5666666666552 23489999999877766555543310 012688888888752 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+ +|+++.|...
T Consensus 81 ~~~~g-id~lv~~Ag~ 95 (260)
T 2z1n_A 81 RDLGG-ADILVYSTGG 95 (260)
T ss_dssp HHTTC-CSEEEECCCC
T ss_pred HHhcC-CCEEEECCCC
Confidence 11234 8999988763
No 486
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=84.46 E-value=7.6 Score=27.01 Aligned_cols=84 Identities=8% Similarity=0.014 Sum_probs=49.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeC-CHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEH-VPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~-~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++++|-.|+ +|..+..+++.+- ...+|+.++. ++...+...+.+... ..++.++..|+.+. +.++..
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 28 TGKNVLITGA-SKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK------GYKAAVIKFDAASESDFIEAIQT 100 (271)
T ss_dssp SCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHHH
Confidence 4567776654 5556666666552 2348888887 555555555555441 14788888888762 121111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 101 ~~~~~g~id~li~nAg~ 117 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGV 117 (271)
T ss_dssp HHHHHSSCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 1123579999998764
No 487
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=84.39 E-value=8 Score=26.62 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=46.0
Q ss_pred eEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhhh--cc
Q psy5757 32 KVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVELM--MK 106 (139)
Q Consensus 32 ~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~--~~ 106 (139)
.+|-.| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+. .++.++..|+.+. +..+... ..
T Consensus 2 ~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 71 (248)
T 3asu_A 2 IVLVTG-ATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---------DNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_dssp EEEETT-TTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred EEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 344444 45666666665541 23489999999876655444331 4677888888761 2222111 12
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
.+.+|+++.|...
T Consensus 72 ~g~iD~lvnnAg~ 84 (248)
T 3asu_A 72 WCNIDILVNNAGL 84 (248)
T ss_dssp TCCCCEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 3579999998764
No 488
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=84.26 E-value=8.1 Score=28.17 Aligned_cols=44 Identities=9% Similarity=0.086 Sum_probs=32.0
Q ss_pred cCCCCCeEEEEcc--cCChhHHHHHHHcCCCceEEEEeCCHHHHHHHH
Q psy5757 26 HLNENSKVLEIGS--GSGYLTNMISELMNSTGQVIGIEHVPQLVNSSI 71 (139)
Q Consensus 26 ~~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~ 71 (139)
.++++++||-.|+ |.|.....+++..+ ++|++++.+++.++.++
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Confidence 3678899999884 34555566666554 48999999988877774
No 489
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=84.13 E-value=7.3 Score=26.98 Aligned_cols=81 Identities=10% Similarity=0.062 Sum_probs=47.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+. ...+|+.++.+++..+...+.+. .++.++..|+.+. +..+..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~ 75 (260)
T 1nff_A 6 TGKVALVSGG-ARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---------DAARYVHLDVTQPAQWKAAVDTA 75 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---------cCceEEEecCCCHHHHHHHHHHH
Confidence 4567776664 5666666666541 23489999998766655443331 2477788887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 76 ~~~~g~iD~lv~~Ag~ 91 (260)
T 1nff_A 76 VTAFGGLHVLVNNAGI 91 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123468999988763
No 490
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=84.10 E-value=7 Score=26.95 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=50.8
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++...+.+... ..++.++..|+.+. +..+..
T Consensus 13 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 85 (260)
T 2zat_A 13 ENKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE------GLSVTGTVCHVGKAEDRERLVAMA 85 (260)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHHH
Confidence 456676655 56666777766552 2348999999987766655555431 13677788887651 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 86 ~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 86 VNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123478999988753
No 491
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=84.09 E-value=5 Score=28.86 Aligned_cols=84 Identities=12% Similarity=0.097 Sum_probs=49.5
Q ss_pred CCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCC----------HHHHHHHHHHHHhhccccccCCcEEEEEccchhh
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHV----------PQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR 97 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~----------~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~ 97 (139)
.++.+|-.| |+|..+..+++.+ ....+|+.++.+ ....+...+.+... ..++.++..|+.+.
T Consensus 26 ~gk~vlVTG-as~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~ 98 (322)
T 3qlj_A 26 DGRVVIVTG-AGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA------GGEAVADGSNVADW 98 (322)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT------TCEEEEECCCTTSH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc------CCcEEEEECCCCCH
Confidence 456676665 4566666666655 223489998876 45555555555441 14677888888762
Q ss_pred --hHHHhh--hccCCceeEEecCccc
Q psy5757 98 --IETVEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 98 --~~~~~~--~~~~~~~D~vi~~~~~ 119 (139)
+..+.. ...++.+|++|.|...
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 111111 1123578999998864
No 492
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=84.08 E-value=6.8 Score=27.14 Aligned_cols=85 Identities=11% Similarity=0.124 Sum_probs=50.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.| |+|..+..+++.+- ...+|+.++.+++..+.+.+.+... ....++.++..|+.+. +..+..
T Consensus 6 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 6 NGKVALVTG-AAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ----FEPQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----cCCCceEEEecCCCCHHHHHHHHHHH
Confidence 356777766 45666666666552 2348999999987666554444320 0014678888888762 222111
Q ss_pred hccCCceeEEecCcc
Q psy5757 104 MMKFDRYDFLPHAPA 118 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~ 118 (139)
....+.+|+++.|..
T Consensus 81 ~~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 81 VDHFGRLDILVNNAG 95 (267)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 112356899998875
No 493
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.04 E-value=6.5 Score=27.95 Aligned_cols=86 Identities=16% Similarity=0.192 Sum_probs=52.0
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+.. +. ...++.++..|+.+. +..+..
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV----PAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----CCceEEEEecCCCCHHHHHHHHHH
Confidence 456666555 56667777766552 234899999998777666555543 10 001688888898762 122111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 1123578999998753
No 494
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=83.96 E-value=6.6 Score=26.61 Aligned_cols=82 Identities=6% Similarity=0.036 Sum_probs=50.1
Q ss_pred CeEEEEcccCChhHHHHHHHcCC-Cc-------eEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHH
Q psy5757 31 SKVLEIGSGSGYLTNMISELMNS-TG-------QVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IET 100 (139)
Q Consensus 31 ~~iLdiG~G~G~~~~~l~~~~~~-~~-------~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~ 100 (139)
+.+|-.| |+|..+..+++.+-. .. +|+.++.++..++...+.+... ..++.++..|+.+. +..
T Consensus 3 k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~ 75 (244)
T 2bd0_A 3 HILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE------GALTDTITADISDMADVRR 75 (244)
T ss_dssp EEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT------TCEEEEEECCTTSHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc------CCeeeEEEecCCCHHHHHH
Confidence 4566555 567777777766522 22 6899999987776665555431 14688888898762 222
Q ss_pred Hhh--hccCCceeEEecCccc
Q psy5757 101 VEL--MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 101 ~~~--~~~~~~~D~vi~~~~~ 119 (139)
+.. ....+.+|++|.+...
T Consensus 76 ~~~~~~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 76 LTTHIVERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHhCCCCCEEEEcCCc
Confidence 111 1123568999988753
No 495
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=83.73 E-value=6.9 Score=27.32 Aligned_cols=80 Identities=14% Similarity=0.142 Sum_probs=47.9
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
.++.+|-.|+ +|..+..+++.+- ...+|+.++.+++..+...+.+ .++.++..|+.+. +..+..
T Consensus 8 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~ 76 (270)
T 1yde_A 8 AGKVVVVTGG-GRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------PGAVFILCDVTQEDDVKTLVSET 76 (270)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------cCCeEEEcCCCCHHHHHHHHHHH
Confidence 4567776664 5666666666552 2348999999976655443321 3477788887751 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|++|.|...
T Consensus 77 ~~~~g~iD~lv~nAg~ 92 (270)
T 1yde_A 77 IRRFGRLDCVVNNAGH 92 (270)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123578999988754
No 496
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=83.72 E-value=7 Score=26.71 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=49.7
Q ss_pred CCeEEEEcccCChhHHHHHHHcC-CCceEEEEeC-CHHHHHHHHHHHHhhccccccCCcEEEEEccchhh--hHHHhh--
Q psy5757 30 NSKVLEIGSGSGYLTNMISELMN-STGQVIGIEH-VPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKR--IETVEL-- 103 (139)
Q Consensus 30 ~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~-~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~-- 103 (139)
++.+|-.| |+|..+..+++.+. ...+|+.++. +++..+.+.+.+... ..++.++..|+.+. +..+..
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL------GSDAIAVRADVANAEDVTNMVKQT 76 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 45666554 56777777766552 2348888888 777666655555431 14677888887752 222111
Q ss_pred hccCCceeEEecCccc
Q psy5757 104 MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 ~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 77 VDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1123468999988763
No 497
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=83.70 E-value=3.9 Score=28.84 Aligned_cols=82 Identities=13% Similarity=0.150 Sum_probs=46.6
Q ss_pred CCCCeEEEEcccCChhHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHHHhhccccccCCcEEEEEccchhhhHHHhhhcc
Q psy5757 28 NENSKVLEIGSGSGYLTNMISELM-NSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMK 106 (139)
Q Consensus 28 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 106 (139)
.+++.+|-=|++ +..+..+++.+ ...++|+..|.+.. +.+.+.+... -.++..+..|+.+. .....-..
T Consensus 7 L~GKvalVTGas-~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~------g~~~~~~~~Dv~d~-~~v~~~~~ 76 (247)
T 4hp8_A 7 LEGRKALVTGAN-TGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD------GGNASALLIDFADP-LAAKDSFT 76 (247)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT------TCCEEEEECCTTST-TTTTTSST
T ss_pred CCCCEEEEeCcC-CHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh------CCcEEEEEccCCCH-HHHHHHHH
Confidence 356666665544 45555555544 22348988888743 2233333331 14678888887762 22222223
Q ss_pred CCceeEEecCccc
Q psy5757 107 FDRYDFLPHAPAE 119 (139)
Q Consensus 107 ~~~~D~vi~~~~~ 119 (139)
+.++|+++.|.-.
T Consensus 77 ~g~iDiLVNNAGi 89 (247)
T 4hp8_A 77 DAGFDILVNNAGI 89 (247)
T ss_dssp TTCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 4679999988754
No 498
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=83.45 E-value=2.3 Score=30.98 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=34.3
Q ss_pred CCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 27 LNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 27 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
+ ++.+||-+|+|. |..+..+++...+.++|++++.+++..+.+++
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 5 889999999863 56777777776112489999999888877765
No 499
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=83.38 E-value=5 Score=29.48 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.3
Q ss_pred cCCCCCeEEEEcccC-ChhHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q psy5757 26 HLNENSKVLEIGSGS-GYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72 (139)
Q Consensus 26 ~~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~v~~~d~~~~~~~~a~~ 72 (139)
.++++++||-+|+|. |..+..+++..+. .+|++++.+++.++.+++
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGA-KRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 367889999999753 5666777776642 279999999888887754
No 500
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.34 E-value=5.7 Score=27.67 Aligned_cols=86 Identities=14% Similarity=0.182 Sum_probs=50.4
Q ss_pred CCCeEEEEcccCChhHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHHHh-hccccccCCcEEEEEccchhh--hHHHhh-
Q psy5757 29 ENSKVLEIGSGSGYLTNMISELMN-STGQVIGIEHVPQLVNSSIQNILH-SNARLLTDGHIKFVALGMIKR--IETVEL- 103 (139)
Q Consensus 29 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~v~~~d~~~~~~~~a~~~~~~-~~~~~~~~~~i~~~~~d~~~~--~~~~~~- 103 (139)
.++.+|-.| |+|..+..+++.+. ...+|+.++.+++.++.+.+.+.. .. ...++.++..|+.+. +..+..
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~ 79 (278)
T 1spx_A 5 AEKVAIITG-SSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV----SEQNVNSVVADVTTDAGQDEILST 79 (278)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc----CCCceeEEecccCCHHHHHHHHHH
Confidence 345666555 45666766666552 234899999998777766555521 00 014678888888752 222111
Q ss_pred -hccCCceeEEecCccc
Q psy5757 104 -MMKFDRYDFLPHAPAE 119 (139)
Q Consensus 104 -~~~~~~~D~vi~~~~~ 119 (139)
....+.+|+++.|...
T Consensus 80 ~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 80 TLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHSCCCEEEECCC-
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1123478999988753
Done!