RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5757
(139 letters)
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 45.6 bits (107), Expect = 2e-07
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARL 81
++ L+E +K L++GSGSG LT + ++ TG+VIGI+H+ +LV+ S+ N+ + L
Sbjct: 69 LLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL 128
Query: 82 LTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESW 121
L+ G ++ V P P
Sbjct: 129 LSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALI 168
Score = 25.6 bits (55), Expect = 2.2
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 77 SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATMPE 136
S++ L+ G+IK + E+M+ DR + P +M+ P I + AT+
Sbjct: 7 SHSELI----HNLRKNGIIKTDKVFEVMLATDRSHYAKCNP---YMDSPQSIGFQATISA 59
Query: 137 GSY 139
Sbjct: 60 PHM 62
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 43.2 bits (101), Expect = 2e-06
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 22 IIQPH----------LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSI 71
I P +N VLE GSGSG ++ +S+ + S G+VI E + +
Sbjct: 81 ITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK 140
Query: 72 QNI 74
+N
Sbjct: 141 KNY 143
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 39.5 bits (91), Expect = 5e-05
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
+ + +++ G G GYL ++ L+ + GI+
Sbjct: 24 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS 60
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 38.1 bits (88), Expect = 1e-04
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72
S I+ + +LE+G GSG +++ I +N G + +E + ++
Sbjct: 74 ASYIIMRCGL-----RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMD 128
Query: 73 NI 74
N+
Sbjct: 129 NL 130
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 37.3 bits (85), Expect = 2e-04
Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVN 68
L N +VL++ +G G++ N + +V+ + ++
Sbjct: 13 LKGNEEVLDVATGGGHVANAFAPF---VKKVVAFDLTEDILK 51
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 209
Score = 37.0 bits (85), Expect = 3e-04
Identities = 10/63 (15%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVP 64
K+ A I + L + +VL +G+ SG + ++++++ + +E+
Sbjct: 41 KLAAMILKGHRL---------KLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSA 90
Query: 65 QLV 67
+
Sbjct: 91 KPF 93
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 35.9 bits (82), Expect = 8e-04
Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 15/121 (12%)
Query: 5 KIGAAI-GGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHV 63
K+ AAI G+ + + +SK+L +G+ +G + ++++ + V IE+
Sbjct: 58 KLAAAIIKGLKVM---------PIKRDSKILYLGASAGTTPSHVADIADKG-IVYAIEYA 107
Query: 64 PQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123
P+ ++ +L + A I A + VE + P+ N
Sbjct: 108 PR----IMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILIKN 163
Query: 124 I 124
Sbjct: 164 A 164
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 35.0 bits (80), Expect = 0.001
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 13 ISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQ 72
+ I+ + ++VLE G+GSG LT + + GQVI E + +
Sbjct: 85 AAQIVHEG-----DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARR 139
Query: 73 NI 74
N+
Sbjct: 140 NV 141
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 34.7 bits (79), Expect = 0.002
Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 14/134 (10%)
Query: 5 KIGAAIGGISAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVP 64
K+GAAI + + VL +G SG + +S+++ G++ GIE P
Sbjct: 57 KLGAAI--------MNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP 108
Query: 65 QLVNSSIQNILHSNARLLTDGHIKFVAL-----GMIKRIETVELMMKFDRYDFLPHAPAE 119
+++ + + + G + I + + +A
Sbjct: 109 RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED-VAQPTQAKILIDNAEVY 167
Query: 120 SWMNIPVCINYTAT 133
I +
Sbjct: 168 LKRGGYGMIAVKSR 181
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 34.5 bits (78), Expect = 0.002
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 18 TYLSIIQ--PHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLV 67
+Y I PH+ ++ VL++G G+G L+ ++ +V+G++ L
Sbjct: 22 SYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSEILY 71
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus
subtilis [TaxId: 1423]}
Length = 234
Score = 34.2 bits (77), Expect = 0.002
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQ 65
+VL+IG+G+G+ S + IG++ +
Sbjct: 14 CRAEHRVLDIGAGAGHTALAFSPY---VQECIGVDATKE 49
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 34.4 bits (78), Expect = 0.003
Identities = 7/61 (11%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG 85
+ ++ +++GSG G + ++ + G+E + + G
Sbjct: 148 KMTDDDLFVDLGSGVGQVVLQVA-AATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG 206
Query: 86 H 86
Sbjct: 207 K 207
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 34.2 bits (77), Expect = 0.003
Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 8/118 (6%)
Query: 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARL 81
+I+ + VL++G G G G+ G++ +N + + R
Sbjct: 17 LIRLYTKRGDSVLDLGCGKGGDLLKYER--AGIGEYYGVDIAEVSINDARVRARNMKRRF 74
Query: 82 LTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHA--PAESWMNIPVCINYTATMPEG 137
+ F A R + F H ++I P G
Sbjct: 75 ----KVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGG 128
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 33.7 bits (76), Expect = 0.003
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 13/94 (13%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR------ 80
L VLE+G G+G +T +L+ +V+ E P+LV + + +
Sbjct: 19 LRPTDVVLEVGPGTGNMTV---KLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVL 75
Query: 81 ----LLTDGHIKFVALGMIKRIETVELMMKFDRY 110
L TD + + + + K +
Sbjct: 76 VGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLH 109
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1,
PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 34.0 bits (77), Expect = 0.004
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 25 PHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQ 65
HL ++ VL++GSG+G L ++ +VIGIE
Sbjct: 29 RHLFKDKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSSI 67
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 31.8 bits (71), Expect = 0.016
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
+ P +LE+GS G T+ + E N + +E + ++ + +
Sbjct: 12 VRAFTPFFR-PGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGIT 67
Query: 80 RLLTDGHIKFVALGMIKRIETVELMMKFDRYDFL 113
+ + + + T L D L
Sbjct: 68 YIHSRFEDAQLPRRYDNIVLTHVLEHIDDPVALL 101
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 32.0 bits (72), Expect = 0.017
Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG 85
L + +++GSG G + G E + + +I R G
Sbjct: 213 QLKKGDTFMDLGSGVGNCVVQAAL-ECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG 271
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 31.6 bits (71), Expect = 0.021
Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 13 ISAILTYLSIIQPHLN-ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSI 71
+ I L + + + + E KVL++ G G + + Q +E L
Sbjct: 26 YNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPR-QYSLLEKRSSLYKFLN 84
Query: 72 QNILHSNARLL 82
S ++L
Sbjct: 85 AKFEGSPLQIL 95
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus
subtilis, Ermc' [TaxId: 1423]}
Length = 235
Score = 31.4 bits (70), Expect = 0.022
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQ 65
LNE+ + EIGSG G+ T EL+ V IE +
Sbjct: 18 RLNEHDNIFEIGSGKGHFTL---ELVQRCNFVTAIEIDHK 54
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 31.6 bits (70), Expect = 0.022
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISE 49
+ + L++ G+G LT +
Sbjct: 28 IEKCVENNLVFDDYLDLACGTGNLTENLCP 57
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 31.4 bits (70), Expect = 0.023
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
+ + ++EIG G LT + Q+ IE
Sbjct: 18 NPQKGQAMVEIGPGLAALTE---PVGERLDQLTVIEL 51
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 31.4 bits (70), Expect = 0.025
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 25 PHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQ 65
L ++ VL++G G+G L+ ++ VIG++
Sbjct: 34 KDLFKDKIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSSI 72
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia
coli [TaxId: 562]}
Length = 245
Score = 31.5 bits (70), Expect = 0.026
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
+ +++L++GSGSG + + TG I +
Sbjct: 30 RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSS 66
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 30.9 bits (69), Expect = 0.033
Identities = 9/42 (21%), Positives = 22/42 (52%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVN 68
+ E ++++ G GSG + +++ + S+G+V E +
Sbjct: 101 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAK 142
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM
{Methylobacillus flagellatus [TaxId: 405]}
Length = 395
Score = 30.7 bits (69), Expect = 0.041
Identities = 13/103 (12%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Query: 27 LNENSKVLEIGSGSGYLT-NMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG 85
+++ K+++ G+ G +I +V IE + + +
Sbjct: 210 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFAS- 268
Query: 86 HIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCI 128
I G + V + F+ A A+ + +
Sbjct: 269 RITVHGCGAGENTIRVPFNHEGGHGGFVKPADADHEPADLIDV 311
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal
domain {Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 30.8 bits (68), Expect = 0.041
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNA 79
+S+ + +VLE G E + + +G+E P+ ++
Sbjct: 12 VSLAEAPRGG--RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILAD 69
Query: 80 RLLTDGHIKF 89
LL + F
Sbjct: 70 FLLWEPGEAF 79
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 30.8 bits (68), Expect = 0.045
Identities = 13/111 (11%), Positives = 27/111 (24%), Gaps = 4/111 (3%)
Query: 19 YLSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSN 78
P + +++IGSG + + + + + + +
Sbjct: 41 LHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQ--DITLSDFTDRNREELEKWLKKEP 98
Query: 79 ARLLTDGHIKFVAL--GMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVC 127
+KF G R E E ++ L P
Sbjct: 99 GAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAV 149
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 30.6 bits (68), Expect = 0.049
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 27 LNENSKVLEIGSGSGYLTNMI 47
L E V EIG+G G+LT +
Sbjct: 27 LKETDTVYEIGTGKGHLTTKL 47
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Bacillus subtilis [TaxId: 1423]}
Length = 204
Score = 30.2 bits (67), Expect = 0.051
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHI 87
N+N +E+G+G G + +++ N IGIE ++ +++Q + S
Sbjct: 28 NDNPIHIEVGTGKGQFISGMAK-QNPDINYIGIELFKSVIVTAVQKVKDSE----AQNVK 82
Query: 88 KFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPV 126
+K +F P + +
Sbjct: 83 LLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRL 121
>d1yzha1 c.66.1.53 (A:8-211) tRNA
(guanine-N(7)-)-methyltransferase TrmB {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 204
Score = 30.2 bits (67), Expect = 0.055
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 28 NENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
N+N +E+GSG G + +++ N IGI+
Sbjct: 30 NDNPIHVEVGSGKGAFVSGMAK-QNPDINYIGIDI 63
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 30.2 bits (67), Expect = 0.062
Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSN 78
+N +++G G+G +T EL +V I+ P+ ++++ N+
Sbjct: 31 PGKNDVAVDVGCGTGGVTL---ELAGRVRRVYAIDRNPEAISTTEMNLQRHG 79
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 30.0 bits (66), Expect = 0.080
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 5/49 (10%)
Query: 25 PHLNENSKVLEIGSGSGYLT-----NMISELMNSTGQVIGIEHVPQLVN 68
K+L IG G+G + + ++ +E + +
Sbjct: 36 GDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIA 84
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 28.1 bits (61), Expect = 0.26
Identities = 11/87 (12%), Positives = 21/87 (24%), Gaps = 3/87 (3%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDG 85
++ ++VL G + +S V+G E V
Sbjct: 17 NVVPGARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGD 73
Query: 86 HIKFVALGMIKRIETVELMMKFDRYDF 112
+ A G+ + D
Sbjct: 74 FKVYAAPGIEIWCGDFFALTARDIGHC 100
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO)
{Haemophilus influenzae [TaxId: 727]}
Length = 225
Score = 28.2 bits (61), Expect = 0.35
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Query: 22 IIQPHLNENSKVLEIGSGSGYLTN-MISELMNSTGQVIGIEHVPQLVNSSIQNILHSNAR 80
+ + + +S V ++G G T + ++IGI++ +V Q+I ++
Sbjct: 32 LAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSE 91
Query: 81 LLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWM 122
+ + + IK V L + +
Sbjct: 92 IPVEILCNDIRHVEIKNASMVILNFTLQFLPPEDRIALLTKI 133
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 27.8 bits (60), Expect = 0.45
Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
E +VL++ G+G T ++E +V+G++
Sbjct: 39 KREVRRVLDLACGTGIPTLELAERGY---EVVGLDL 71
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 27.5 bits (60), Expect = 0.46
Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 24 QPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILH 76
+ L++ KVLEIG+G GY T +I+E+++ +V+ +E ++ N + + + +
Sbjct: 65 ELDLHKGQKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSY 114
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 27.6 bits (60), Expect = 0.53
Identities = 9/41 (21%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
+ + ++ + VL+IG G GY T+ ++ G++
Sbjct: 77 LRERLDDKATAVLDIGCGEGYYTHAFAD-ALPEITTFGLDV 116
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 27.1 bits (59), Expect = 0.61
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 93 GMIKRIETVELMMKFDRYDFLPHAPAE-SWMNIPVCINYTATM 134
G+I+ E +K+ RY + + + ++ P+ I T+
Sbjct: 19 GIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTV 61
Score = 25.2 bits (54), Expect = 3.0
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 22 IIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSN 78
+ +L +LE+G+GSG+ +ISE++ V IE +P+LV + +N+ +
Sbjct: 71 LEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAG 125
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 27.2 bits (59), Expect = 0.67
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISEL 50
L +++ H +VL++ G+G + M+ E
Sbjct: 49 LGLLRQH--GCHRVLDVACGTGVDSIMLVEE 77
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 27.0 bits (58), Expect = 0.80
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 21 SIIQPHLNENSKVLEIGSGSGYLTNM 46
S ++ +L +VL++G G+G +
Sbjct: 34 SFLEEYLKNPCRVLDLGGGTGKWSLF 59
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 26.5 bits (57), Expect = 1.1
Identities = 7/38 (18%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 14 SAILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELM 51
S +L ++ P + L++G G+G + ++
Sbjct: 20 SDVLAAAKVVAP-----GRTLDLGCGNGRNSLYLAANG 52
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 226
Score = 25.9 bits (55), Expect = 1.7
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 16 ILTYLSIIQPHLNENSKVLEIGSGSGYLTNMISELMN 52
I T ++ ++ + KVL++ G G + ++ +
Sbjct: 24 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF 60
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 68
Score = 24.7 bits (54), Expect = 1.8
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 28 NENSKVLEIGSGSGYLTNMISELMNSTG 55
++ +K+LEI S GY + IS L + G
Sbjct: 3 SDQTKILEICSILGYSS--ISLLKANLG 28
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 25.7 bits (55), Expect = 2.3
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 13 ISAILTYLSIIQPHLNENSKVLEIGSGSG----YLTNMISELMNSTGQVIGIE 61
I I+ YL +N +L+ G+ + N + + G++
Sbjct: 101 IGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVD 153
>d1smyd_ e.29.1.2 (D:) RNA-polymerase beta-prime {Thermus thermophilus
[TaxId: 274]}
Length = 1504
Score = 25.9 bits (56), Expect = 2.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 56 QVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFVALGMIKRIETVE 102
+ G E V + + IQ + + L D HI+ V M+K +E +
Sbjct: 1336 EAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTD 1382
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 25.2 bits (54), Expect = 2.7
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 21 SIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEH 62
++I P+ +VL++ +GSG L S ++
Sbjct: 7 NMIGPYF-NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNR 47
>d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 109
Score = 24.5 bits (53), Expect = 3.0
Identities = 4/25 (16%), Positives = 8/25 (32%)
Query: 109 RYDFLPHAPAESWMNIPVCINYTAT 133
+ + E + C N T +
Sbjct: 40 TLLYTIMSKPEDLKVVKNCANTTRS 64
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 25.3 bits (54), Expect = 3.0
Identities = 15/110 (13%), Positives = 38/110 (34%), Gaps = 2/110 (1%)
Query: 32 KVLEIGSGSGYL-TNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSNARLLTDGHIKFV 90
V I +G + + L+ +V GI N+ L+ N + +G++K
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61
Query: 91 ALGMIKRIETVELMMKFDRYD-FLPHAPAESWMNIPVCINYTATMPEGSY 139
+ V+++ + + + A + ++ + G+
Sbjct: 62 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTL 111
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 24.8 bits (53), Expect = 3.7
Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 77 SNARLLTDGHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMNIPVCINYTATM 134
+N L+ + G+I + M + DR + P P +M+ P I T+
Sbjct: 11 NNEDLIR----QLKDHGVIASDAVAQAMKETDRKHYSPRNP---YMDAPQPIGGGVTI 61
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 24.7 bits (53), Expect = 3.8
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 29 ENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQNILHSN 78
V++ G+G+G L L + I+ P + ++ +N N
Sbjct: 48 GGRSVIDAGTGNGILACGSYLLGAESVTAFDID--PDAIETAKRNCGGVN 95
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 24.6 bits (52), Expect = 5.3
Identities = 7/42 (16%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 32 KVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLVNSSIQN 73
+VLE+G G + + + IE +
Sbjct: 56 RVLEVGFGMAIAASKVQ--EAPIDEHWIIECNDGVFQRLRDW 95
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 232
Score = 24.3 bits (52), Expect = 5.4
Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 8/81 (9%)
Query: 13 ISAILTYLSIIQPHLNENSKVLEIGS---GSGYLTNMISELMNSTGQVIGIEHVPQLVNS 69
+ L ++P ++E+G GS ++++M QVIGI+
Sbjct: 69 QAVYHDMLWELRP-----RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQI 123
Query: 70 SIQNILHSNARLLTDGHIKFV 90
++ + +
Sbjct: 124 PASDMENITLHQGDCSDLTTF 144
>d1unld_ a.74.1.1 (D:) CDK5 activator 1 (NCK5a, p25) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 150
Score = 24.0 bits (52), Expect = 5.5
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 20 LSIIQPHLNENSKVLEIGSGSGYLTNMISELMNSTG 55
LS+I +SK+L+I + Y T + S+L N +G
Sbjct: 118 LSVINLM---SSKMLQINADPHYFTQVFSDLKNESG 150
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 194
Score = 24.2 bits (51), Expect = 6.3
Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
Query: 27 LNENSKVLEIGSGSGYLTNMISELMNSTGQVIGIEHVPQLV--NSSIQNILHSNARLLTD 84
++++ +L++G G G + +++ + ST +L N + N+ + + R++
Sbjct: 50 VDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS 109
Query: 85 GHIKFVALGMIKRIETVELMMKFDRYDFLPHAPAESWMN 123
+ V +I T + + +
Sbjct: 110 DLYENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLK 148
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 24.3 bits (51), Expect = 6.4
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 26 HLNENSKVLEIGSGSGYLTNMISE 49
L + +EIG G+G +
Sbjct: 33 CLLPEGRGVEIGVGTGRFAVPLKI 56
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.391
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 504,101
Number of extensions: 21352
Number of successful extensions: 106
Number of sequences better than 10.0: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 62
Length of query: 139
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 62
Effective length of database: 1,350,386
Effective search space: 83723932
Effective search space used: 83723932
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.3 bits)