BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy576
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus GN=DDX52
PE=2 SV=1
Length = 596
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 102/124 (82%)
Query: 36 AQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTG 95
A E + G PPVLVFVQS ERA+EL++ELIY+GINVDVIH+DRTQ+QRDN V SFR G
Sbjct: 400 AMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAG 459
Query: 96 RIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
+IW+LI T LL RGIDF+ V LV+NYDFP+S++ YIHRIGR GR G +GKAVTFFT+ D
Sbjct: 460 KIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDK 519
Query: 156 PLLR 159
PLLR
Sbjct: 520 PLLR 523
>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens GN=DDX52
PE=1 SV=3
Length = 599
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 102/124 (82%)
Query: 36 AQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTG 95
A E + G PPVLVFVQS ERA+EL++ELIY+GINVDVIH++RTQ+QRDN V SFR G
Sbjct: 402 AMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAG 461
Query: 96 RIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
+IW+LI T LL RGIDF+ V LV+NYDFP+S++ YIHRIGR GR G +GKA+TFFT+ D
Sbjct: 462 KIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDK 521
Query: 156 PLLR 159
PLLR
Sbjct: 522 PLLR 525
>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus GN=Ddx52
PE=2 SV=2
Length = 598
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 102/124 (82%)
Query: 36 AQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTG 95
A E + G +PPVLVFVQS ERA+EL++ELIY+GINVDVIH++RTQ+QRDN V SFR G
Sbjct: 403 AMRELVKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAG 462
Query: 96 RIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
+IW+LI T LL RGIDF+ V LV+NYDFP+S++ YIHRIGR GR G GKAVTFFT+ D
Sbjct: 463 KIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDK 522
Query: 156 PLLR 159
PLLR
Sbjct: 523 PLLR 526
>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus
GN=Ddx52 PE=2 SV=1
Length = 598
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 101/124 (81%)
Query: 36 AQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTG 95
A E + G PPVLVFVQS ERA+EL++ELIY+GINVDVIH++RTQ+QRDN V SFR G
Sbjct: 403 AMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAG 462
Query: 96 RIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
+IW+LI T LL RGIDF+ V LV+NYDFP+S++ YIHRIGR GR G GKAVTFFT+ D
Sbjct: 463 KIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDK 522
Query: 156 PLLR 159
PLLR
Sbjct: 523 PLLR 526
>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium
discoideum GN=ddx52 PE=3 SV=1
Length = 668
Score = 166 bits (420), Expect = 5e-41, Method: Composition-based stats.
Identities = 74/123 (60%), Positives = 94/123 (76%)
Query: 36 AQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTG 95
A + I G+EPP+L+F QSKERA +L+ ELI+DGINVDVIHS+RTQ QRD +V+ FR G
Sbjct: 430 AVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGINVDVIHSERTQFQRDTIVKKFRMG 489
Query: 96 RIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
+IW+LI TEL+ RG+DF+ V V+N+DFP + SYIHRIGR GR GR G A T +T D
Sbjct: 490 KIWVLICTELMARGMDFKGVNFVINFDFPHTLASYIHRIGRTGRAGRPGVAYTLYTDADT 549
Query: 156 PLL 158
P+L
Sbjct: 550 PML 552
>sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=ROK1 PE=3 SV=2
Length = 537
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 91/109 (83%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F+QS RA+ L++ELIYD +NV+VIH++RT KQR+ +R F+ G W+LITT++
Sbjct: 352 KPPIIIFLQSIPRAKALFHELIYDKLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTDV 411
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
L RG+DF+ V LV+NYD P ++ +Y+HRIGR GRGG+EGKAVTFFTK+D
Sbjct: 412 LARGVDFKGVNLVINYDVPQTSQAYVHRIGRTGRGGKEGKAVTFFTKED 460
>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp.
japonica GN=Os07g0647900 PE=2 SV=2
Length = 540
Score = 157 bits (396), Expect = 3e-38, Method: Composition-based stats.
Identities = 67/115 (58%), Positives = 90/115 (78%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTE 104
+ PPVL+FVQSKERA+ELY EL +D + DVIH+D ++QR + V + R G+ W+LI TE
Sbjct: 384 LNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATE 443
Query: 105 LLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
++ RG+DF+ V V+NYDFP SA +YIHRIGR+GR GR G+A+TFFT++D P LR
Sbjct: 444 VIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLR 498
>sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ROK1 PE=3 SV=1
Length = 558
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 92/109 (84%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F+QS RA+ L++EL+YD +NVDVIH++RT KQR+ V++ F+ G IW+LITT++
Sbjct: 368 KPPIIIFLQSIHRAKALFHELLYDKLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDV 427
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
L RG+DF+ V +V+NYD P +A +Y+HRIGR GRGG+ G+AVTFFTK+D
Sbjct: 428 LARGVDFKGVNMVINYDVPQTAQAYVHRIGRTGRGGKAGRAVTFFTKED 476
>sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ROK1 PE=3 SV=2
Length = 550
Score = 156 bits (394), Expect = 6e-38, Method: Composition-based stats.
Identities = 66/109 (60%), Positives = 93/109 (85%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F+QS RA+ L++EL+YD +NVDVIH++RT KQRD V++ F++G IW+LITT++
Sbjct: 361 KPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQRDEVIKRFKSGDIWVLITTDV 420
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
+ RG+DF+ V LV+NYD P SA +Y+HRIGR GRGG+ GKAVTFFTK+D
Sbjct: 421 IARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKED 469
>sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHR1 PE=3 SV=1
Length = 578
Score = 155 bits (391), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/109 (60%), Positives = 92/109 (84%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F+QS RA+ L++EL+YD +NVDVIH++RT KQR+ V++ F+ G IW+LITT++
Sbjct: 378 KPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDV 437
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
L RG+DF+ V LV+NYD P SA +Y+HRIGR GRGG+ GKAVTFFTK+D
Sbjct: 438 LARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKED 486
>sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ROK1 PE=3 SV=1
Length = 547
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 85/108 (78%)
Query: 48 PVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLG 107
PV++F+QS +RA+ L+ EL++DGINVD IH D T +R +V+ FR G +W+LI T++L
Sbjct: 366 PVIIFLQSIDRAKALFKELVFDGINVDQIHGDMTAAKRASVIDRFRNGEVWVLICTDVLA 425
Query: 108 RGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
RGIDFR + LV+NYD P SA SY+HRIGR GR GR GKAVTFFTK+DA
Sbjct: 426 RGIDFRGINLVINYDVPQSAQSYVHRIGRTGRAGRLGKAVTFFTKEDA 473
>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana
GN=RH57 PE=2 SV=1
Length = 541
Score = 151 bits (381), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/115 (57%), Positives = 87/115 (75%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTE 104
+ PPVL+FVQSKERA+ELY+EL + I VIHSD +R+N V FR G W+LI T+
Sbjct: 379 LNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATD 438
Query: 105 LLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
++ RG+DF+ + V+NYDFP SA +YIHRIGR+GR GR G+A+TF+T+QD P LR
Sbjct: 439 VIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLR 493
>sp|P0CR04|ROK1_CRYNJ ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ROK1 PE=3 SV=1
Length = 620
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 83/112 (74%)
Query: 48 PVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLG 107
P L+FVQS +RA+ELY L+ DGI VD +H + + +RD ++ FR G +W+L+ TE+L
Sbjct: 424 PSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFRVGAVWMLVVTEVLA 483
Query: 108 RGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
RG+DFR V++V+NYDFP + SYIHRIGR GR GR GKA+TFF +D P LR
Sbjct: 484 RGMDFRGVKVVINYDFPQTVPSYIHRIGRTGRAGRPGKAITFFNIEDGPYLR 535
>sp|P0CR05|ROK1_CRYNB ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ROK1 PE=3 SV=1
Length = 620
Score = 149 bits (375), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/112 (55%), Positives = 83/112 (74%)
Query: 48 PVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLG 107
P L+FVQS +RA+ELY L+ DGI VD +H + + +RD ++ FR G +W+L+ TE+L
Sbjct: 424 PSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFRVGAVWMLVVTEVLA 483
Query: 108 RGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
RG+DFR V++V+NYDFP + SYIHRIGR GR GR GKA+TFF +D P LR
Sbjct: 484 RGMDFRGVKVVINYDFPQTVPSYIHRIGRTGRAGRPGKAITFFNIEDGPYLR 535
>sp|Q09775|ROK1_SCHPO ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rok1 PE=3 SV=1
Length = 481
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 84/115 (73%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTE 104
++P V++FVQ ERA+ LY EL++D I+V VIH + Q +R+ + FR G IW+LI T+
Sbjct: 287 LKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATD 346
Query: 105 LLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
LL RGIDF V++V+N+DFP S SYIHRIGR GR G G+AVTFFTK+D ++
Sbjct: 347 LLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDGEYIK 401
>sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=ROK1 PE=3 SV=1
Length = 553
Score = 131 bits (329), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/109 (61%), Positives = 92/109 (84%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F+QS RA+ L++EL+YD +NVDVIH++RT KQRD V++ F+ G IW+LITT++
Sbjct: 366 KPPIIIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDV 425
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
L RG+DF+ V +V+NYD P SA +Y+HRIGR GRGGR GKAVTFFTK+D
Sbjct: 426 LARGVDFKGVNMVINYDVPQSAQAYVHRIGRTGRGGRSGKAVTFFTKED 474
>sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ROK1
PE=3 SV=1
Length = 569
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 90/109 (82%)
Query: 47 PPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELL 106
PPV++F++S RA+ L++EL+YD +NVDVIH++RTQ QR+ ++ F++G +W LI T++L
Sbjct: 375 PPVIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQREKIIERFKSGDLWCLICTDVL 434
Query: 107 GRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
RGIDF+ + LV+NYD P SA +Y+HRIGR GRGGR+G AVTFFTKQDA
Sbjct: 435 ARGIDFKGINLVINYDVPRSAQAYVHRIGRTGRGGRKGTAVTFFTKQDA 483
>sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rok1
PE=3 SV=1
Length = 742
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL+YD + V+HSD + QR ++++ FR G I
Sbjct: 503 LRPPFLIFTQTIPRAIALHSELLYDIPPEAGGSARIAVLHSDLSDTQRSDIMKGFRKGEI 562
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RG+DFR + VVNYD P+S Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 563 WILVTTDLLARGVDFRGINGVVNYDIPNSPAVYVHRVGRTGRAGREGGVAVTYYTKEDIP 622
Query: 157 LLR 159
++
Sbjct: 623 YVK 625
>sp|Q1E306|ROK1_COCIM ATP-dependent RNA helicase ROK1 OS=Coccidioides immitis (strain RS)
GN=ROK1 PE=3 SV=1
Length = 730
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL+YD + V+HS+ + +R +V+ FR G I
Sbjct: 499 LRPPFLIFTQTIARAIALHSELMYDIPAEAGGSSRIAVLHSELSDSKRSDVMAGFRKGEI 558
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
W+LITT+LL RG+DFR + VVNYD P+S+ SY+HR+GR GR GREG AVTF+TK+D P
Sbjct: 559 WVLITTDLLARGVDFRGINGVVNYDIPNSSASYVHRVGRTGRAGREGGVAVTFYTKEDIP 618
Query: 157 LLR 159
++
Sbjct: 619 YVK 621
>sp|Q2UQW3|ROK1_ASPOR ATP-dependent RNA helicase rok1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rok1 PE=3 SV=1
Length = 725
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL YD + V+HSD + QR ++++FR G I
Sbjct: 491 LRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEI 550
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RGIDFR + VVNYD P+SA Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 551 WILVTTDLLARGIDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTYYTKEDIP 610
Query: 157 LLR 159
++
Sbjct: 611 YVK 613
>sp|Q0CMB0|ROK1_ASPTN ATP-dependent RNA helicase rok1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rok1 PE=3 SV=2
Length = 749
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL+YD + V+HS+ + QR +++ FR G I
Sbjct: 514 LRPPFLIFTQTIPRAVALHSELLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEI 573
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RG+DFR + VVNYD P+SA Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 574 WILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTYYTKEDIP 633
Query: 157 LLR 159
++
Sbjct: 634 YVK 636
>sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rok1 PE=3 SV=1
Length = 738
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL YD + V+HSD + QR ++++FR G I
Sbjct: 504 LRPPFLIFTQTIPRAVALHSELRYDIPTEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEI 563
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RG+DFR + VVNYD P+SA Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 564 WILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKEDIP 623
Query: 157 LLR 159
++
Sbjct: 624 YVK 626
>sp|Q4WRH5|ROK1_ASPFU ATP-dependent RNA helicase rok1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rok1
PE=3 SV=1
Length = 739
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL YD + V+HSD + QR ++++FR G I
Sbjct: 506 LRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEI 565
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RG+DFR + VVNYD P+SA Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 566 WILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKEDIP 625
Query: 157 LLR 159
++
Sbjct: 626 YVK 628
>sp|A1D1E3|ROK1_NEOFI ATP-dependent RNA helicase rok1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rok1
PE=3 SV=1
Length = 738
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL YD + V+HSD + QR ++++FR G I
Sbjct: 505 LRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEI 564
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RG+DFR + VVNYD P+SA Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 565 WILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKEDIP 624
Query: 157 LLR 159
++
Sbjct: 625 YVK 627
>sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ROK1 PE=1 SV=1
Length = 564
Score = 127 bits (318), Expect = 4e-29, Method: Composition-based stats.
Identities = 65/110 (59%), Positives = 90/110 (81%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F++S RA+ LY+EL+YD INVDVIH++RT QRD ++ F+TG +W LI T++
Sbjct: 372 KPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDV 431
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
L RGIDF+ V LV+NYD P S+ +Y+HRIGR GRGGR GKA+TF+TKQD+
Sbjct: 432 LARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDS 481
>sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ROK1 PE=3 SV=1
Length = 564
Score = 126 bits (317), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/110 (59%), Positives = 90/110 (81%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F++S RA+ LY+EL+YD INVDVIH++RT QRD ++ F+TG +W LI T++
Sbjct: 372 KPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDV 431
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
L RGIDF+ V LV+NYD P S+ +Y+HRIGR GRGGR GKA+TF+TKQD+
Sbjct: 432 LARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDS 481
>sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=ROK1 PE=3 SV=1
Length = 570
Score = 126 bits (316), Expect = 6e-29, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 92/110 (83%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PPV++F++S RA+ LY+E++YD +NVDVIH++RTQ QR+ ++ F++G +W LITT++
Sbjct: 381 KPPVIIFLESITRAKALYHEMMYDSLNVDVIHAERTQVQRNKIIERFKSGDLWCLITTDV 440
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
L RG+DF+ V LV+NYD P +A +Y+HRIGR GRGGR GKAVTF+TK+D+
Sbjct: 441 LARGVDFKGVNLVINYDVPRTAQAYVHRIGRTGRGGRSGKAVTFYTKEDS 490
>sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rok1 PE=3 SV=2
Length = 729
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP L+F Q+ RA L++EL YD + V+HS+ + QR +++ FR G I
Sbjct: 498 LRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEI 557
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WIL+TT+LL RG+DFR + VVNYD P+SA Y+HR+GR GR GREG AVT++TK+D P
Sbjct: 558 WILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKEDIP 617
Query: 157 LLR 159
++
Sbjct: 618 YVK 620
>sp|A4RMV8|ROK1_MAGO7 ATP-dependent RNA helicase ROK1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=ROK1 PE=3 SV=1
Length = 775
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 83/131 (63%), Gaps = 11/131 (8%)
Query: 37 QDETILLGIEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVV 89
+DET L PP LVFVQ+ ERA L+ EL YD V V+HS + R V+
Sbjct: 543 EDETPL---RPPFLVFVQTIERATALHEELKYDIPAAAGGASRVAVLHSSMPESARAAVI 599
Query: 90 RSFRTGRIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVT 148
R FR +W+LITT++L RG+DF V VVNYD P SA +Y+HR GR GR GR+G AVT
Sbjct: 600 RRFRAADVWVLITTDVLARGVDFAGVNGVVNYDVPGSAAAYVHRAGRTGRAGRKGGIAVT 659
Query: 149 FFTKQDAPLLR 159
F+TK+D P ++
Sbjct: 660 FYTKEDIPFVK 670
>sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=ROK1 PE=3 SV=1
Length = 579
Score = 125 bits (315), Expect = 8e-29, Method: Composition-based stats.
Identities = 64/110 (58%), Positives = 91/110 (82%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PPV++F++S RA+ L++EL+YD +NVDVIH++RTQ QRD ++ F++G +W LI T++
Sbjct: 383 KPPVIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQRDKIIERFKSGDLWCLICTDV 442
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
L RG+DF+ V LV+NYD P SA +Y+HRIGR GRGGR GKA+TF+TKQD+
Sbjct: 443 LARGVDFKGVNLVINYDVPRSAQAYVHRIGRTGRGGRSGKAITFYTKQDS 492
>sp|Q7SFC8|ROK1_NEUCR ATP-dependent RNA helicase rok-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rok-1 PE=3 SV=1
Length = 781
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 10/135 (7%)
Query: 33 PVQAQDETILLGIEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQR 85
PV + D L PP LVF Q+ ERAQ L++EL YD V V+HS R
Sbjct: 534 PVSSADSGPPL--RPPFLVFTQTIERAQALHDELKYDIPLEAGGSARVAVLHSSLPDSVR 591
Query: 86 DNVVRSFRTGRIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK 145
++ FR+G +W+LITT++L RG+DF V VVNYD P SA +Y+HR GR GR GREG
Sbjct: 592 SKIMARFRSGEVWVLITTDVLARGVDFAGVNGVVNYDVPVSAAAYVHRAGRTGRAGREGG 651
Query: 146 -AVTFFTKQDAPLLR 159
AVTF+TK D P ++
Sbjct: 652 VAVTFYTKDDIPFVK 666
>sp|Q4IPI1|ROK1_GIBZE ATP-dependent RNA helicase ROK1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ROK1 PE=3
SV=1
Length = 693
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 78/123 (63%), Gaps = 8/123 (6%)
Query: 45 IEPPVLVFVQSKERAQELYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRI 97
+ PP LVF Q+ +RA L+ EL YD + +HS T R +++R FR G I
Sbjct: 471 LRPPFLVFTQTIDRATALHEELQYDIPLEAGGAARIAALHSGLTDSARSSIMRKFRAGDI 530
Query: 98 WILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAP 156
WILITT++L RG+DF V VVNYD P S+ Y+HR GR GR GREG AVTF+TK+D P
Sbjct: 531 WILITTDVLARGVDFAGVNGVVNYDVPGSSAGYVHRAGRTGRAGREGGIAVTFYTKEDIP 590
Query: 157 LLR 159
++
Sbjct: 591 FVK 593
>sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ROK1 PE=3 SV=1
Length = 565
Score = 120 bits (302), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 89/110 (80%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+PP+++F++S RA+ LY+EL+YD INVDVIH++RT QR+ ++ F+TG +W LI T++
Sbjct: 374 KPPIIIFLESIARAKALYHELMYDRINVDVIHAERTAIQREKIIERFKTGELWCLICTDV 433
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
L RGIDF+ V LV+NYD P++A +Y+HRIGR GRGGR GKAVT +TK D+
Sbjct: 434 LARGIDFKGVNLVINYDVPTTAQAYVHRIGRTGRGGRSGKAVTLYTKLDS 483
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 71/111 (63%)
Query: 49 VLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLGR 108
+L+FV++K ++ +L DG IH D+TQ +RD V+ F++GR I+ T++ R
Sbjct: 413 ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAAR 472
Query: 109 GIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
G+D + ++ VVNYDFP++ YIHRIGR GR G +G A TFFT +A R
Sbjct: 473 GLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAR 523
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%)
Query: 46 EPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTEL 105
+P LVFV++K A L L G IH DRTQ++R++ +RSF+TG I++ T++
Sbjct: 351 QPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDV 410
Query: 106 LGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
RG+D V V+NYD P S Y+HRIGR GR G+ G A FFT+ D L +
Sbjct: 411 ASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAK 464
>sp|Q2HCV7|ROK1_CHAGB ATP-dependent RNA helicase ROK1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=ROK1 PE=3 SV=1
Length = 667
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 8/106 (7%)
Query: 62 LYNELIYD-------GINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLGRGIDFRT 114
L++EL YD V V+HS R ++ FR G +W+L+TT++L RG+DF
Sbjct: 455 LHDELKYDIPLEAGGSARVAVLHSSMADSARSKIMARFRAGEVWVLVTTDVLARGVDFAG 514
Query: 115 VRLVVNYDFPSSAISYIHRIGRAGRGGREGK-AVTFFTKQDAPLLR 159
V VVNYD P+SA +Y+HR GR GR GREG AVTF+TK D P ++
Sbjct: 515 VNGVVNYDVPTSAAAYVHRAGRTGRAGREGGVAVTFYTKDDIPFVK 560
>sp|Q8H136|RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana
GN=RH14 PE=1 SV=2
Length = 619
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 32 SPVQAQD--ETILLGIEP--PVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDN 87
+P++ Q E IL EP V++F +K +L L IH D++Q +RDN
Sbjct: 385 APMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDN 443
Query: 88 VVRSFRTGRIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAV 147
V+ FR+GR +L+ T++ RG+D + +R VVNYDFP+ Y+HRIGR GR G G+A
Sbjct: 444 VLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAF 503
Query: 148 TFFTKQDA 155
TFF QD+
Sbjct: 504 TFFGDQDS 511
>sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1
PE=2 SV=1
Length = 402
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 72/110 (65%)
Query: 50 LVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLGRG 109
++F ++ + L ++ + V +H D Q +RD ++R FR+G +LITT++L RG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 110 IDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
ID + V LV+NYD PS+ +YIHRIGR+GR GR+G A+ F T+ DA L+
Sbjct: 332 IDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLK 381
>sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana
GN=RH37 PE=2 SV=2
Length = 633
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%)
Query: 34 VQAQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFR 93
+ AQ E + G + LVFV++K A L N L +G IH DRTQ++R+ +++F+
Sbjct: 406 LHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFK 465
Query: 94 TGRIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQ 153
+GR IL+ T++ RG+D V VVN+D P+ Y+HRIGR GR G+ G A FF
Sbjct: 466 SGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDG 525
Query: 154 DAPLLR 159
+ L R
Sbjct: 526 NTSLAR 531
>sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana
GN=RH46 PE=2 SV=2
Length = 645
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 39 ETILLGIEP--PVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGR 96
E IL EP +++F +K +L L IH D++Q +RD+V+ FR+GR
Sbjct: 397 EQILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGR 455
Query: 97 IWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
+L+ T++ RG+D + +R+VVNYDFP+ Y+HRIGR GR G G A TFF QDA
Sbjct: 456 TPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDA 514
>sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana
GN=RH52 PE=2 SV=1
Length = 646
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 73/126 (57%)
Query: 34 VQAQDETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFR 93
+ AQ E G + LVFV++K+ A L N L +G IH DR+Q++R+ +RSF+
Sbjct: 393 LHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFK 452
Query: 94 TGRIWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQ 153
TGR IL+ T++ RG+D V VVN+D P+ Y+HRIGR GR G G A FF
Sbjct: 453 TGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDN 512
Query: 154 DAPLLR 159
+ + +
Sbjct: 513 NTTMAK 518
>sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp.
japonica GN=Os01g0172200 PE=2 SV=1
Length = 708
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 39 ETILLGIEP--PVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGR 96
+ IL EP +++F +K +L L IH D++Q +RD+V+ FR+GR
Sbjct: 416 DQILRSQEPGSKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGR 474
Query: 97 IWILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDA 155
IL+ T++ RG+D + +R+VVNYDFP+ Y+HRIGR GR G G A TFF QD+
Sbjct: 475 CPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDS 533
>sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp.
japonica GN=PL10B PE=2 SV=1
Length = 638
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 68/111 (61%)
Query: 49 VLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLGR 108
LVFV++K A L N L +G IH DRTQ++R+ +RSF++G IL+ T++ R
Sbjct: 431 TLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAAR 490
Query: 109 GIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
G+D V V+N+D P+ Y+HRIGR GR G+ G A FF + + PL R
Sbjct: 491 GLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLAR 541
>sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana
GN=RH11 PE=2 SV=1
Length = 612
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 68/111 (61%)
Query: 49 VLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLGR 108
LVFV++K A L N L + IH DRTQ++R+ +RSF+TGR IL+ T++ R
Sbjct: 411 TLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAAR 470
Query: 109 GIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQDAPLLR 159
G+D V VVN+D P+ Y+HRIGR GR G+ G A FF + +A L R
Sbjct: 471 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLAR 521
>sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17
PE=2 SV=1
Length = 650
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 70/113 (61%)
Query: 39 ETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIW 98
E I+ E ++FV++K R +L + DG IH D++Q +RD V+ FR+G+
Sbjct: 332 EEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAP 391
Query: 99 ILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFT 151
ILI T++ RG+D V+ V+NYD+P+S+ Y+HRIGR R +G A TFFT
Sbjct: 392 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
>sp|Q75C39|DBP5_ASHGO ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP5
PE=3 SV=2
Length = 466
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
Query: 50 LVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIWILITTELLGRG 109
++FVQ+K+ A LY EL +G V ++H D RD ++ FR GR +LITT +L RG
Sbjct: 319 IIFVQTKQTANMLYTELKREGHQVSILHGDLQSADRDRLIGDFREGRSKVLITTNVLARG 378
Query: 110 IDFRTVRLVVNYDFPSSA------ISYIHRIGRAGRGGREGKAVTFF 150
ID TV +VVNYD P +A +Y+HRIGR GR GR G A++F
Sbjct: 379 IDIPTVSMVVNYDLPMTANGQPDPSTYVHRIGRTGRFGRTGVAISFI 425
>sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17
PE=1 SV=2
Length = 729
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 70/113 (61%)
Query: 39 ETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIW 98
E I+ E ++FV++K R +L + DG IH D++Q +RD V+ FR+G+
Sbjct: 411 EEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAP 470
Query: 99 ILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFT 151
ILI T++ RG+D V+ V+NYD+P+S+ Y+HRIGR R +G A TFFT
Sbjct: 471 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 523
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5
PE=2 SV=1
Length = 614
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%)
Query: 39 ETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIW 98
E I+ E +VFV++K R EL ++ DG IH D++Q++RD V+ F+ G+
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 99 ILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFT 151
ILI T++ RG+D V+ V+NYD+P+S+ YIHRIGR R + G A TFFT
Sbjct: 394 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
>sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes GN=DDX5
PE=2 SV=1
Length = 614
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%)
Query: 39 ETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIW 98
E I+ E +VFV++K R EL ++ DG IH D++Q++RD V+ F+ G+
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 99 ILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
ILI T++ RG+D V+ V+NYD+P+S+ YIHRIGR R + G A TFFT +
Sbjct: 394 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
>sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5
PE=1 SV=2
Length = 614
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%)
Query: 39 ETILLGIEPPVLVFVQSKERAQELYNELIYDGINVDVIHSDRTQKQRDNVVRSFRTGRIW 98
E I+ E +VFV++K R EL ++ DG IH D++Q++RD V+ F+ G+
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 99 ILITTELLGRGIDFRTVRLVVNYDFPSSAISYIHRIGRAGRGGREGKAVTFFTKQD 154
ILI T++ RG+D V+ V+NYD+P+S+ YIHRIGR R + G A TFFT +
Sbjct: 394 ILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,403,278
Number of Sequences: 539616
Number of extensions: 2298949
Number of successful extensions: 8619
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 6501
Number of HSP's gapped (non-prelim): 2159
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)