BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5761
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4F777|HMGN5_RAT High mobility group nucleosome-binding domain-containing protein 5
OS=Rattus norvegicus GN=Hmgn5 PE=2 SV=1
Length = 429
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 78/114 (68%)
Query: 21 GRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRK 80
G++D + +G++D + +G++D + EG++D + EG++D + EG++D + EG++D
Sbjct: 251 GKEDLHEEDGKEDLHEEDGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLH 310
Query: 81 KPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDMY 134
+ EG++D + EG++D + EG++D + +G++ + + EG++D + EG++D++
Sbjct: 311 EEEGKEDLHEEEGKEDLHEEEGKEDLHEEDGKEGQHEEEGKEDLHEEEGKEDLH 364
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 81/120 (67%)
Query: 12 GRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRK 71
G++D + +G++D + +G++D + EG++D + EG++D + EG++D + EG++D
Sbjct: 251 GKEDLHEEDGKEDLHEEDGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLH 310
Query: 72 KPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 131
+ EG++D + EG++D + EG++D + +G++ + + EG++D + EG++D + +G++
Sbjct: 311 EEEGKEDLHEEEGKEDLHEEEGKEDLHEEDGKEGQHEEEGKEDLHEEEGKEDLHEEDGKE 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 84/126 (66%)
Query: 5 ERLEKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKP 64
E L + +G++D + +G++D + EG++D + EG++D + EG++D + EG++D +
Sbjct: 253 EDLHEEDGKEDLHEEDGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEE 312
Query: 65 EGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDR 124
EG++D + EG++D + EG++D + +G++ + + EG++D + EG++D + +G++ +
Sbjct: 313 EGKEDLHEEEGKEDLHEEEGKEDLHEEDGKEGQHEEEGKEDLHEEEGKEDLHEEDGKEGQ 372
Query: 125 KKPEGR 130
+ +G+
Sbjct: 373 HEEDGK 378
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 82/127 (64%), Gaps = 6/127 (4%)
Query: 5 ERLEKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKP 64
E L + +G++D + EG++D + EG++D + EG++D + EG++D + EG++D +
Sbjct: 262 EDLHEEDGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEEEGKEDLHEE 321
Query: 65 EGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ------DRKKP 118
EG++D + EG++D + +G++ + + EG++D + EG++D + +G++ +KK
Sbjct: 322 EGKEDLHEEEGKEDLHEEDGKEGQHEEEGKEDLHEEEGKEDLHEEDGKEGQHEEDGKKKA 381
Query: 119 EGRQDRK 125
+G +DRK
Sbjct: 382 DGNEDRK 388
>sp|Q99PL5|RRBP1_MOUSE Ribosome-binding protein 1 OS=Mus musculus GN=Rrbp1 PE=2 SV=2
Length = 1605
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 26 KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR- 79
KK EG Q++ KKPEG ++ KK EG Q++ KK EG Q++ KK EG Q++ KK EG Q++
Sbjct: 571 KKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 630
Query: 80 KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQD 132
KK EG Q++ KK EG Q++ KK EG Q++ KK EG Q++ KK EG Q++ KK EG Q+
Sbjct: 631 KKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKKGEGAQNQGKKGEGAQN 688
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 81/119 (68%), Gaps = 12/119 (10%)
Query: 26 KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR-KKPEGRQDR- 79
KK EG Q++ KKPEG ++ KK EG Q++ KK EG Q++ KK EG Q++ KK EG Q++
Sbjct: 430 KKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQA 489
Query: 80 KKPEGRQDR-KKPEGRQDR-KKPEGRQDRKK--PEGRQDR-KKPEGRQDR-KKPEGRQD 132
KK EG Q++ KK EG Q++ KK EG Q++ K EG Q++ KK E Q++ KK EG Q+
Sbjct: 490 KKGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQN 548
>sp|Q1ELU5|LAT4A_LACTA M-zodatoxin-Lt4a OS=Lachesana tarabaevi PE=1 SV=1
Length = 207
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 7 LEKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQDRKKPEGRQDRKKP 64
L K +GR+D ++ G +RK E + +K +GR+D ++ G +RK E + +K
Sbjct: 57 LRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKV 116
Query: 65 EGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQ 122
+GR+D ++ G +RK E + +K +GR+D ++ G +RK E + +K +GR+
Sbjct: 117 QGREDSEEAGRGGINRKLMEMVNNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGRE 176
Query: 123 DRKKPEGRQD 132
D ++ G +D
Sbjct: 177 DTEEARGLKD 186
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 12 GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQD 69
G +RK E + +K +GR+D ++ G +RK E + +K +GR+D ++ G +
Sbjct: 72 GGINRKLMEMVNNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGREDSEEAGRGGIN 131
Query: 70 RKKPEGRQDRKKPEGRQD----------RKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 119
RK E + +K +GR+D RK E + +K +GR+D ++ G +D+ K
Sbjct: 132 RKLMEMVNNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGREDTEEARGLKDKFKSM 191
Query: 120 G 120
G
Sbjct: 192 G 192
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 1 MISDERLEKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQDRKKPEGR 58
M+++ R K +GR+D ++ G +RK E + +K +GR+D ++ G +RK E
Sbjct: 81 MVNNLR--KVQGREDSEEAGRGGINRKLMEMVNNLRKVQGREDSEEAGRGGINRKLMEMV 138
Query: 59 QDRKKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEG 111
+ +K +GR+D ++ G +RK E + +K +GR+D ++ G +D+ K G
Sbjct: 139 NNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGREDTEEARGLKDKFKSMG 192
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 30 GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPE-GRQD 87
G DRK E + +K +GR+D ++ G +RK E + +K +GR+D ++ G +
Sbjct: 44 GGIDRKLMEVVNNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGREDSEEAGRGGIN 103
Query: 88 RKKPEGRQDRKKPEGRQDRKKPE-GRQDRKKPEGRQDRKKPEGRQD 132
RK E + +K +GR+D ++ G +RK E + +K +GR+D
Sbjct: 104 RKLMEMVNNLRKVQGREDSEEAGRGGINRKLMEMVNNLRKVQGRED 149
>sp|Q3SYK4|VRTN_MOUSE Vertnin OS=Mus musculus GN=Vrtn PE=2 SV=1
Length = 740
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 12/62 (19%)
Query: 7 LEKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEG 66
++ P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+
Sbjct: 562 MQIPSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQA 609
Query: 67 RQ 68
+
Sbjct: 610 ME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 19 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 77
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 28 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 86
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 37 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 95
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 46 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 104
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 55 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 113
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 64 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 122
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 73 PEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 131
P Q R+KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 565 PSLSQRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 12/55 (21%)
Query: 5 ERLEKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 59
+R +KP+GRQ KPEGRQ KPE +Q KPEGRQ KPEGRQ +P+ +
Sbjct: 569 QRRQKPQGRQ---KPEGRQ---KPEEQQ---KPEGRQ---KPEGRQKPVEPQAME 611
>sp|P12114|SQT1_CAEEL Cuticle collagen sqt-1 OS=Caenorhabditis elegans GN=sqt-1 PE=3 SV=2
Length = 324
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 15 DRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 74
D + P GR K P G Q P G+ P G PEG P G+Q R+ P+
Sbjct: 231 DAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPD 284
Query: 75 GRQDRKKPEGR 85
G Q P+GR
Sbjct: 285 GTQGETGPDGR 295
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 24 DRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 83
D + P GR K P G Q P G+ P G PEG P G+Q R+ P+
Sbjct: 231 DAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPD 284
Query: 84 GRQDRKKPEGR 94
G Q P+GR
Sbjct: 285 GTQGETGPDGR 295
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 33 DRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 92
D + P GR K P G Q P G+ P G PEG P G+Q R+ P+
Sbjct: 231 DAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPD 284
Query: 93 GRQDRKKPEGR 103
G Q P+GR
Sbjct: 285 GTQGETGPDGR 295
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 42 DRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 101
D + P GR K P G Q P G+ P G PEG P G+Q R+ P+
Sbjct: 231 DAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPD 284
Query: 102 GRQDRKKPEGR 112
G Q P+GR
Sbjct: 285 GTQGETGPDGR 295
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 51 DRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 110
D + P GR K P G Q P G+ P G PEG P G+Q R+ P+
Sbjct: 231 DAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPD 284
Query: 111 GRQDRKKPEGR 121
G Q P+GR
Sbjct: 285 GTQGETGPDGR 295
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 60 DRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 119
D + P GR K P G Q P G+ P G PEG P G+Q R+ P+
Sbjct: 231 DAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPD 284
Query: 120 GRQDRKKPEGR 130
G Q P+GR
Sbjct: 285 GTQGETGPDGR 295
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 8 EKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGR 67
E P GR K P G Q P G+ P G PEG P G+Q R+ P+G
Sbjct: 233 EHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEG------PSGKQGRQGPDGT 286
Query: 68 QDRKKPEGR 76
Q P+GR
Sbjct: 287 QGETGPDGR 295
>sp|Q01133|FMRA_CALPA Antho-RFamide neuropeptides OS=Calliactis parasitica PE=1 SV=1
Length = 334
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 57/84 (67%)
Query: 20 EGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDR 79
+GR R++ +GR R++ +GR R++ +GR R++ +GR R++ +GR R++ +GR R
Sbjct: 143 QGRFGREEDQGRFGREEDQGRFGREEDQGRFGREEEQGRFGREEDQGRFGREEEQGRFGR 202
Query: 80 KKPEGRQDRKKPEGRQDRKKPEGR 103
++ +GR R++ +GR R++ +GR
Sbjct: 203 EEDQGRFGREEDQGRFGREEEQGR 226
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 53/78 (67%)
Query: 8 EKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGR 67
E+ +GR R++ +GR R++ +GR R++ +GR R++ +GR R++ +GR R++ +GR
Sbjct: 149 EEDQGRFGREEDQGRFGREEDQGRFGREEEQGRFGREEDQGRFGREEEQGRFGREEDQGR 208
Query: 68 QDRKKPEGRQDRKKPEGR 85
R++ +GR R++ +GR
Sbjct: 209 FGREEDQGRFGREEEQGR 226
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 78/125 (62%), Gaps = 10/125 (8%)
Query: 6 RLEKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 65
R + +GR R++ +GR R++ +GR R++ +GR R++ +GR R++ +GR R++ +
Sbjct: 112 RFGREQGRFGREEDQGRFGREEDQGRFGREE-QGRFGREEDQGRFGREEDQGRFGREEDQ 170
Query: 66 GRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRK 125
GR GR++ + GR R++ +GR R++ +GR R++ +GR R++ +GR R+
Sbjct: 171 GRF------GREEEQ---GRFGREEDQGRFGREEEQGRFGREEDQGRFGREEDQGRFGRE 221
Query: 126 KPEGR 130
+ +GR
Sbjct: 222 EEQGR 226
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 5 ERLEKPE--GRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRK 62
ERL+K E RQ++++ E + + + + +++ + R +++ RQ++++ + ++ K
Sbjct: 2745 ERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELK 2804
Query: 63 KPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQ 122
+ E + ++ + + +++ RQ++++ + + K+ E Q+R + E R++ E R
Sbjct: 2805 RQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQE--QERLQKEEELKRQEQE-RL 2861
Query: 123 DRKKPE 128
+RKK E
Sbjct: 2862 ERKKIE 2867
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 13 RQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE--GRQDRKKPEGRQDRKKPEGRQDR 70
RQ++++ + ++ K+ E Q+R + E ++ +K E RQ++++ + + K+ E + +
Sbjct: 2741 RQEQERLQKEEELKRQE--QERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798
Query: 71 KKPE-GRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPEGRQDRKKPE 128
K+ E RQ++++ E + + + + +++ + R +++ RQ++++ + ++ K+ E
Sbjct: 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQE 2857
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,858,899
Number of Sequences: 539616
Number of extensions: 3409771
Number of successful extensions: 50152
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 904
Number of HSP's that attempted gapping in prelim test: 16886
Number of HSP's gapped (non-prelim): 16371
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)