BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5768
(652 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/651 (41%), Positives = 383/651 (58%), Gaps = 60/651 (9%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W V + TI A D T RE VV+ IAVDWIA NIYW+D +V
Sbjct: 1932 IYW--VDMGLSTISRAKRDQTWREDVVTNGIGRVEG-----IAVDWIAGNIYWTDQGFDV 1984
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEVARL G +RYV+IS G+D+P A+ V PE GYLFW+E G+ P I R+ LDG ++ +L
Sbjct: 1985 IEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTERMVLVN 2044
Query: 172 EIIMPIKDITLDLKFFSAFYRN--------------------LSKGNIHIISLSNLSD-- 209
I I++D + ++ + LS N+ + S+S D
Sbjct: 2045 VSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGENREVVLSSDNMDMFSVSVFEDYI 2104
Query: 210 --------------------VSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
++S++ LKDIK++++ Q GTN C NNGGC +
Sbjct: 2105 YWSDRTHANGSIKRGSKDNATESVSLRTGIGVQLKDIKVFNRARQKGTNVCAQNNGGCQQ 2164
Query: 250 LCLYNGVSA-VCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIR 308
LCL+ G CACAHG++++DG SC +YD +++YS + SIH++D+++LN+P +
Sbjct: 2165 LCLFRGGGRRTCACAHGMLSEDGVSCRDYDGYLLYSERTILKSIHLSDENNLNAPIKPFE 2224
Query: 309 NSTMMKNIIELSYDYKRKT-----LFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAY 363
++ MKN+I L++DY+ T +FYSDI G I + +G+ R ++E GSVEGLAY
Sbjct: 2225 DAEHMKNVIALAFDYRYGTKGSNRIFYSDIHFGNIQQINDDGTGRRTIVENVGSVEGLAY 2284
Query: 364 EYVHNYLYWTCNNDATINKIDLDSPKA---QRIVVVRLGQHDKPRGIDIDSCDSRIYWTN 420
+ LYWT +TI + +D + +R V+ + D PR +D C + ++WTN
Sbjct: 2285 HRGWDTLYWTSYTTSTITRHTVDQSRLGAFERETVITMSGDDHPRAFVLDECQNLMFWTN 2344
Query: 421 WNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
WN PSI RA SG II DI PN LA+DH+AEK+++ DA LDKIERC+YDG++
Sbjct: 2345 WNEQHPSIMRATLSGANVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERCEYDGSH 2404
Query: 481 RIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI-RRPMGIVAI 539
R V+ K P+HPF +AVYG++IFWTDWV AV RANKY G ++ LR +I ++PMGI+A+
Sbjct: 2405 RHVILKSEPVHPFGLAVYGDYIFWTDWVRRAVQRANKYVGTDMKLLRVDIPQQPMGIIAV 2464
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHD-F 598
+++ D+C +PCR NG C D+C L G V CSC +VL ED +N+ C+ HD F
Sbjct: 2465 ANDTDSCELSPCRVNNGGCQDLCLLTPKGHVNCSCRGERVLQEDFTCKALNSTCNVHDEF 2524
Query: 599 KCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
+C +G CI F++TCD V +C DKSDE YC+ R C+ G+ C N +C+ S
Sbjct: 2525 ECGNGDCIDFSRTCDGVVHCKDKSDEKQSYCSSRKCKKGFLHCMNGRCVAS 2575
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 174/661 (26%), Positives = 283/661 (42%), Gaps = 84/661 (12%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
+I VCN G T+L E L IA+ P GK+F+++ Q+ +E MDG
Sbjct: 305 RIFVCNKNGLTCVTLLDLE------LYNPKGIALDPAMGKVFFTDY-GQIPKVERCDMDG 357
Query: 72 TKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG-G 129
R +V K +P I +D +++ +YW+D + IEV G+ R+ +I G
Sbjct: 358 QNRTKLVDSKIVFPH------GITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTIIQGIL 411
Query: 130 VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSA 189
++ L V YL+ + S AQ+ I+ + +
Sbjct: 412 IEHLYGLTV--FENYLYATNS---------------DNANAQQKTSVIRVNRFNSTEYQV 454
Query: 190 FYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
R G +HI V + + +P D + K GGC++
Sbjct: 455 VTRVDKGGALHIYHQRRQPTVRSHACEP--DQFGKP-------------------GGCSD 493
Query: 250 LCLYNGV--SAVCACAHGV-VAQDGKSCS--EYDAFIMYS--RVNRIDSIHMTDKSDLNS 302
+CL S C C G + DGKSC E++ F++Y R I + M K
Sbjct: 494 ICLLGNSHKSRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKV---- 549
Query: 303 PFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGL 361
P E + + N L + + ++++D I +G+ +L+ +VEG+
Sbjct: 550 PDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGI 609
Query: 362 AYEYVHNYLYWTCNN-DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTN 420
A +++ N LYWT + TI+ L+ R ++ G+ PR I +D + +YWT+
Sbjct: 610 AVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIE-GKMTHPRAIVVDPLNGWMYWTD 668
Query: 421 W-----NSHLPSIQRAFFSGFGTESIITTDITM-PNALALDHQAEKLFWGDARLDKIERC 474
W +S I+RA+ G IT+ + PN L+LD A+ L+W DA D+IE
Sbjct: 669 WEEDPKDSKRGKIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMV 728
Query: 475 DYDGTNRIVLSKISPL-HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRP 533
+GT R ++ + L H F + Y F+FWT++ ++ R ++ + + +L +N R P
Sbjct: 729 YLNGTERKIVYEGPELNHAFGLCHYSSFLFWTEYRSGSIYRLDQSS--KAVSLLRNERPP 786
Query: 534 MGIVAISD-NLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTV 592
+ + + D CR NG C +C G+ C+C ++L D+ +C N
Sbjct: 787 IFEIRMYDAQQQQVGSNKCRVNNGGCSSLCLATPRGRQ-CACAEDQILGADSVTCEANPS 845
Query: 593 ------CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
C +F C + CI CD +C D SDE C C FKC NN+C
Sbjct: 846 YIPPPQCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRC 905
Query: 647 I 647
I
Sbjct: 906 I 906
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 255/563 (45%), Gaps = 33/563 (5%)
Query: 34 TSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHI 93
++ L ++V V +FW++ I +A +DG+ + V+ P +
Sbjct: 1652 SADLPNAHGLSVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVIQGLDKPHC------L 1705
Query: 94 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKI 153
V + +YW+D I VA + G R +L + P LA+D L+W SG
Sbjct: 1706 VVHPLHGKLYWTDGDN--ISVANMDGSNRTLLFT-NQRGPVGLAIDYPESKLYWISSGN- 1761
Query: 154 PLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTI 213
I R LDG ++ K L + ++ + + + N D + +
Sbjct: 1762 GTINRCNLDGSDLEVIVAVKSQLSKATALAIMGDKLWWADQAS---ERMGTCNKKDGTEV 1818
Query: 214 SMKPYGDSYLKDIKIYSKD-AQTGTNPCGVNNGGCAELCLYNG-VSAVCACAHGVVAQDG 271
++ + + +K+Y + Q G+NPC VNNG C++LCL S C C G + G
Sbjct: 1819 TVLRNSTTLVMLMKVYDESIQQAGSNPCSVNNGDCSQLCLPTSETSRSCMCTAGYSLKSG 1878
Query: 272 -KSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFY 330
+SC +F++YS I I + D +D + + +++ + + + + T+++
Sbjct: 1879 QQSCEGVGSFLLYSVHEGIRGIPL-DPNDKSDALVPVSGTSLA---VGIDFHAENDTIYW 1934
Query: 331 SDIQKGTINSVFFNGS-NHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPK 389
D+ TI+ + + V+ G VEG+A +++ +YWT D + I++
Sbjct: 1935 VDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWT---DQGFDVIEVARLN 1991
Query: 390 AQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITM 448
R VV+ G DKPR I + ++WT W + P I+R+ G ++ I+
Sbjct: 1992 GSFRYVVISQGL-DKPRAITVHPEKGYLFWTEWGQY-PRIERSRLDGTERMVLVNVSISW 2049
Query: 449 PNALALDHQAEKLFWGDARLDKIERCDYD-GTNRIVLSKISPLHPFDMAVYGEFIFWTDW 507
PN +++D++ KL+W DAR DKIER D + G NR V+ + F ++V+ ++I+W+D
Sbjct: 2050 PNGISVDYEDGKLYWCDARTDKIERIDLETGENREVVLSSDNMDMFSVSVFEDYIYWSD- 2108
Query: 508 VIHA---VLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKL 564
HA + R +K E +LR I + + + + C NG C +C
Sbjct: 2109 RTHANGSIKRGSKDNATESVSLRTGIGVQLKDIKVFNRARQKGTNVCAQNNGGCQQLCLF 2168
Query: 565 DETGQVVCSCFTGKVLMEDNRSC 587
G+ C+C G +L ED SC
Sbjct: 2169 RGGGRRTCACAHG-MLSEDGVSC 2190
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 175/348 (50%), Gaps = 19/348 (5%)
Query: 309 NSTMMK----NIIELSYDYKRKTLFYSDI--QKGTINSVFFNGSNHRVLLERQG--SVEG 360
N T++K N + L +DY+ + ++++D+ Q I + NGSN +VL R G + +G
Sbjct: 3045 NYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHINGSNVQVL-HRTGLSNPDG 3103
Query: 361 LAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTN 420
LA ++V LYW TI L+ A R V+V G + PR + +D + +YWT+
Sbjct: 3104 LAVDWVGGNLYWCDKGRDTIEVSKLNG--AYRTVLVNSGLRE-PRALVVDVQNGYLYWTD 3160
Query: 421 WNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
W H I + G I+ T IT PN L LD+ +++W DAR D IE DG+N
Sbjct: 3161 WGDH-SLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFASLDGSN 3219
Query: 481 R-IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGI-VA 538
R VLS+ P H F + ++ ++I+WTDW ++ RA+K TG L + RPM I +
Sbjct: 3220 RHTVLSQDIP-HIFALTLFEDYIYWTDWETKSINRAHKTTGANKTLLISTLHRPMDIHIY 3278
Query: 539 ISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDF 598
PC+ N C ++C L G C+C T L D ++C N C+ F
Sbjct: 3279 HPYRQPDVPNHPCKTNNAGCSNLCLLSPGGGHKCACPTNFYLGSDGKTCVSN--CTASQF 3336
Query: 599 KCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
C + CIPF CD +C D+SDE C CRPG F+C C
Sbjct: 3337 VCKNDKCIPFWWKCDTEDDCGDRSDE-PEDCPEFKCRPGQFQCSTGIC 3383
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/603 (25%), Positives = 258/603 (42%), Gaps = 90/603 (14%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDG--TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
+ ++W++V + + +G T E V+ +Y T L AVDWIA NIYW +
Sbjct: 1306 QSSLYWTDVVEDKIYRGKLLENGALTSFEVVI---QYGLATPEGL--AVDWIAGNIYWVE 1360
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKK 165
+ IEVA+L G R L++G ++ P A+A+DP G LFW++ +P I A + G
Sbjct: 1361 SNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDPRYGILFWTDWDASLPRIEAASMSGAG 1420
Query: 166 QTILAQEIIMPIKDITLDLKFFS-----------AFYRNLSKGNIHIISLS--------- 205
+ + +E L + + A Y L G HI L
Sbjct: 1421 RRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIYSALYDGTGHIEVLRGHEYLSHPF 1480
Query: 206 ----------------------------NLSDVSTISMKPYGDSYLKDIKIYSKDAQT-G 236
N++ V + +P+ D+++Y Q
Sbjct: 1481 AVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPF------DLQVYHPSRQPLA 1534
Query: 237 TNPCGVNNGG--CAELCLYN-GVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSI 292
NPC N G C+ LCL N + CAC H + + +D +C E+ F++Y+R I +
Sbjct: 1535 PNPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTCYEFKKFLLYARQMEIRGV 1594
Query: 293 HMTDKSDLNSPFES-IRNSTM--MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-H 348
D+++P+ + I + T+ + N+ + YD + +++SD++ TI F NG+
Sbjct: 1595 ------DIDNPYYNYIISFTVPDIDNVTVVDYDAVEQRIYWSDVRTQTIKRAFINGTGVE 1648
Query: 349 RVLLERQGSVEGLAYEYVHNYLYWTC--NNDATINKIDLDSPKAQRIVVVRLGQHDKPRG 406
V+ + GL+ ++V L+WT N IN LD + V+ L DKP
Sbjct: 1649 TVVSADLPNAHGLSVDWVSRNLFWTSYDTNKKQINVARLDG-SFKNAVIQGL---DKPHC 1704
Query: 407 IDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466
+ + ++YWT+ ++ I A G +++ T+ P LA+D+ KL+W +
Sbjct: 1705 LVVHPLHGKLYWTDGDN----ISVANMDG-SNRTLLFTNQRGPVGLAIDYPESKLYWISS 1759
Query: 467 RLDKIERCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVY 524
I RC+ DG++ IV K +A+ G+ ++W D + NK G EV
Sbjct: 1760 GNGTINRCNLDGSDLEVIVAVKSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVT 1819
Query: 525 TLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDN 584
LR + M + +++ PC NG+C +C C C G L
Sbjct: 1820 VLRNSTTLVMLMKVYDESIQQAGSNPCSVNNGDCSQLCLPTSETSRSCMCTAGYSLKSGQ 1879
Query: 585 RSC 587
+SC
Sbjct: 1880 QSC 1882
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 172/359 (47%), Gaps = 31/359 (8%)
Query: 247 CAELCLYNGVSAVCACAHG-VVAQDGKSCSEYDAF---IMYS---RVNRIDSIHMTDKSD 299
C++ C + + C+C G ++ DG+SC D F I++S + RID +H D S
Sbjct: 1231 CSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNRHEIRRID-LHRGDYSV 1289
Query: 300 LNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI--NSVFFNG---SNHRVLLER 354
L ++N I L + + +L+++D+ + I + NG S V+
Sbjct: 1290 L---------VPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFEVVIQYG 1340
Query: 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS 414
+ EGLA +++ +YW ++ +++I++ + G + PR I +D
Sbjct: 1341 LATPEGLAVDWIAGNIYWV---ESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDPRYG 1397
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESI--ITTDITMPNALALDHQAEKLFWGDARLDKIE 472
++WT+W++ LP I+ A SG G +I T PN L +D+ +++ W DAR D I
Sbjct: 1398 ILFWTDWDASLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1457
Query: 473 RCDYDGTNRI-VLSKISPL-HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
YDGT I VL L HPF + +YG ++WTDW + + +ANK+TG V +++
Sbjct: 1458 SALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1517
Query: 531 RRPMGIVAISDNLDACAKTPCRHLNGN--CDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
+P + + A PC G C +C ++ + C+C L +DN +C
Sbjct: 1518 TQPFDLQVYHPSRQPLAPNPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTC 1576
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 47/265 (17%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W++VT Q I ++G+ + V+ + +AVDW+ N+YW D +
Sbjct: 3068 IYWTDVTTQGSMIRRMHINGSNVQ-VLHRTGLSNPDG----LAVDWVGGNLYWCDKGRDT 3122
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEV++L G YR VL++ G+ +P AL VD ++GYL+W++ G LI + G+DG ++++
Sbjct: 3123 IEVSKLNGAYRTVLVNSGLREPRALVVDVQNGYLYWTDWGDHSLIGKIGMDGTNRSVIVD 3182
Query: 172 EIIMPIKDITLD---------------LKFFSAFYRN----LSKGNIHIISLS------- 205
I +TLD ++F S N LS+ HI +L+
Sbjct: 3183 TKITWPNGLTLDYINSRIYWADAREDYIEFASLDGSNRHTVLSQDIPHIFALTLFEDYIY 3242
Query: 206 ---------NLSDVSTISMKPYGDSYLK---DIKIYS--KDAQTGTNPCGVNNGGCAELC 251
N + +T + K S L DI IY + +PC NN GC+ LC
Sbjct: 3243 WTDWETKSINRAHKTTGANKTLLISTLHRPMDIHIYHPYRQPDVPNHPCKTNNAGCSNLC 3302
Query: 252 LYN-GVSAVCACAHGV-VAQDGKSC 274
L + G CAC + DGK+C
Sbjct: 3303 LLSPGGGHKCACPTNFYLGSDGKTC 3327
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 169/384 (44%), Gaps = 34/384 (8%)
Query: 227 KIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSE-YDAFIMY-S 284
K+ K++ N C + G C++LC S VC+CA + D +E + I+Y +
Sbjct: 3813 KVPDKNSCQDVNEC-LRFGTCSQLCNNTKGSHVCSCAKNFMKTDNMCKAEGSEHQILYIA 3871
Query: 285 RVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI------ 338
N+I S++ + NS +E I + K +++++ G I
Sbjct: 3872 DDNKIRSMYPFNP---NSAYEPAFQGDENVRIDAMDIYVKGNKIYWTNWHTGRISYCELP 3928
Query: 339 -----------NSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387
N +G + + G+A ++V +YWT D+ + I++
Sbjct: 3929 ASSAASTASNRNRRQIDGGVTHLNISGLKMPRGIAVDWVAGNIYWT---DSGRDVIEVAQ 3985
Query: 388 PKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDIT 447
K + + G D+P I +D +YW++W +H P I+ A G E+++ +I
Sbjct: 3986 MKGENRKTLISGMIDEPHAIVVDPLRGTMYWSDWGNH-PKIETAAMDGTLRETLVQDNIQ 4044
Query: 448 MPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL--SKISPLHPFDMAVYGEFIFWT 505
P LA+D+ E+L+W DA+L I +GT+ +V +K HPF + ++ ++I+
Sbjct: 4045 WPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVVAIDNKKGLSHPFSIDIFEDYIYGV 4104
Query: 506 DWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLD 565
++ + + + +K+ + V L + +V PC C+ +C L
Sbjct: 4105 TYINNRIFKIHKFGHKSVTNLTSGLNHATDVVLYHQYKQPEVTNPCDR--KKCEWLCLLS 4162
Query: 566 ETGQVVCSCFTGKVLMEDNRSCTI 589
+G VC+C GK L DN +C +
Sbjct: 4163 PSGP-VCTCPNGKRL--DNGTCVL 4183
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 120/289 (41%), Gaps = 64/289 (22%)
Query: 39 KISSIAVWPVKGKMFWSNV-TKQVVTIEMAF--------------MDGTKRETVVSQKKY 83
+I ++ ++ K++W+N T ++ E+ +DG +S K
Sbjct: 3899 RIDAMDIYVKGNKIYWTNWHTGRISYCELPASSAASTASNRNRRQIDGGVTHLNISGLKM 3958
Query: 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG 143
P IAVDW+A NIYW+D +VIEVA++ G+ R LISG +D+P A+ VDP G
Sbjct: 3959 PR------GIAVDWVAGNIYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLRG 4012
Query: 144 YLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIIS 203
++WS+ G P I A +DG + L Q+ I + +D ++ + I I
Sbjct: 4013 TMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4072
Query: 204 LSNLSDVSTISMKP---------------YGDSYLK------------------------ 224
L+ V I K YG +Y+
Sbjct: 4073 LNGTDPVVAIDNKKGLSHPFSIDIFEDYIYGVTYINNRIFKIHKFGHKSVTNLTSGLNHA 4132
Query: 225 -DIKIYSKDAQTG-TNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDG 271
D+ +Y + Q TNPC + C LCL + VC C +G +G
Sbjct: 4133 TDVVLYHQYKQPEVTNPC--DRKKCEWLCLLSPSGPVCTCPNGKRLDNG 4179
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 143/403 (35%), Gaps = 79/403 (19%)
Query: 294 MTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE 353
M + +N + + T + N L+ D+ L++ D + TI NG+ +R +L
Sbjct: 3079 MIRRMHINGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGA-YRTVLV 3137
Query: 354 RQGSVE--GLAYEYVHNYLYWTCNND-ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDID 410
G E L + + YLYWT D + I KI +D IV ++ P G+ +D
Sbjct: 3138 NSGLREPRALVVDVQNGYLYWTDWGDHSLIGKIGMDGTNRSVIVDTKITW---PNGLTLD 3194
Query: 411 SCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDK 470
+SRIYW + + I+ A G ++++ DI P+ AL + ++W D
Sbjct: 3195 YINSRIYWAD--AREDYIEFASLDGSNRHTVLSQDI--PHIFALTLFEDYIYWTDWETKS 3250
Query: 471 IERC-DYDGTNRIVL-------SKISPLHPF------------DMAVYGEFIFWTDWVIH 510
I R G N+ +L I HP+ + A + H
Sbjct: 3251 INRAHKTTGANKTLLISTLHRPMDIHIYHPYRQPDVPNHPCKTNNAGCSNLCLLSPGGGH 3310
Query: 511 -AVLRANKYTGEEVYTLRKNIRRPMGIVA-------------------ISDNLDACAKTP 550
N Y G + T N + SD + C +
Sbjct: 3311 KCACPTNFYLGSDGKTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDRSDEPEDCPEFK 3370
Query: 551 CRHLNGNCDDICKLDETGQVVCS---CFTGKVLMEDNRSCTINT--------VCSEHDFK 599
CR GQ CS C + + + C N+ VC FK
Sbjct: 3371 CR--------------PGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFK 3416
Query: 600 CSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
C++ CIP C+ NC D DE C C P F+C
Sbjct: 3417 CTNTNRCIPGIFRCNGQDNCGDGEDEKD--CPEVTCAPNQFQC 3457
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP-GYFK 640
E N +C+ T CS + F C+ G CIP + TCD +C D+SDE CA C P F
Sbjct: 924 ESNSTCSART-CSPNQFSCASGRCIPISWTCDLDDDCGDRSDESA-SCAYPTCFPLTQFT 981
Query: 641 CDNNKCI 647
C+N +CI
Sbjct: 982 CNNGRCI 988
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 592 VCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C +F+C D G CIP CD +C D SDE C R C P F+C NN+C+
Sbjct: 3490 TCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCV 3546
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 592 VCSEHDFKCSDGMCIPFNQ-TCDRVYNCHDKSDEGI--LYCAMRD--CRPGYFKCDNNKC 646
C H+F+C++G C+ +Q CD ++CHD SDE C+ + C +F C N KC
Sbjct: 2855 TCGPHEFRCANGRCLSNSQWECDGEFDCHDHSDEAPKNPRCSSPESKCNDSFFMCKNGKC 2914
Query: 647 I 647
I
Sbjct: 2915 I 2915
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD---CRPGYFKCDNNKCI 647
C + F C G CIP TCD+ +C + DE +C+ R C P F+C+N++CI
Sbjct: 2690 CPANYFACPSGRCIPMTWTCDKEDDCENGEDE--THCSERQDKFCYPVQFECNNHRCI 2745
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + F+C + C+P CD +C D SDE C R C F C N +CI
Sbjct: 3532 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDE--ESCTPRPCSESEFSCANGRCI 3585
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
CS + FKC+ G CIP + TCD +C D SDE C + RP
Sbjct: 1013 CSSNQFKCNSGRCIPVHWTCDGDNDCGDYSDETHANCTNQATRP 1056
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCS 601
C NG C C + +VCSC G L DN++C I + C++H KCS
Sbjct: 1183 CSLNNGGCSHNCTVAPGEGIVCSCPLGMELGADNKTCQIQSYCAKH-LKCS 1232
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN 643
C ++C +G CIP CD +C D +DE +R C F+C+N
Sbjct: 3610 CEFDQYQCKNGHCIPMRWRCDADADCMDGTDEEDCGTGVRTCPLDEFQCNN 3660
Score = 32.7 bits (73), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 593 CSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKC-DNNKCI 647
C +F+C DG+CIP CD +C D SDE C P F C D+ +CI
Sbjct: 1060 CHTDEFQCRLDGLCIPMRWRCDGDTDCMDSSDEKNCEGVTHVCDPNVKFGCKDSARCI 1117
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 582 EDNRSCTINTVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED + C C+ + F+C+ CIP CDR +C D SDE C C F+
Sbjct: 3440 EDEKDCP-EVTCAPNQFQCAITKRCIPRVWVCDRDNDCVDGSDE-PANCTQMTCGVDEFR 3497
Query: 641 C-DNNKCI 647
C D+ +CI
Sbjct: 3498 CKDSGRCI 3505
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/651 (41%), Positives = 377/651 (57%), Gaps = 62/651 (9%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W V + TI A D T RE VV+ IAVDWIA NIYW+D +V
Sbjct: 1937 IYW--VDMGLSTISRAKRDQTWREDVVTNGIGRVEG-----IAVDWIAGNIYWTDQGFDV 1989
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEVARL G +RYV+IS G+D+P A+ V PE GYLFW+E G P I R+ LDG ++ +L
Sbjct: 1990 IEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGHYPRIERSRLDGTERVVLVN 2049
Query: 172 EIIMPIKDITLDLKFFSAFYRN--------------------LSKGNIHIISLSNLSDVS 211
I I++D + ++ + LS N+ + S+S D
Sbjct: 2050 VSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREVVLSSNNMDMFSVSVFEDFI 2109
Query: 212 TISMKPYGDS----------------------YLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
S + + + LKDIK++++D Q GTN C V NGGC +
Sbjct: 2110 YWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFNRDRQKGTNVCAVANGGCQQ 2169
Query: 250 LCLYNGVSA-VCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIR 308
LCLY G CACAHG++A+DG SC EY +++YS + SIH++D+ +LN+P +
Sbjct: 2170 LCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTILKSIHLSDERNLNAPVQPFE 2229
Query: 309 NSTMMKNIIELSYDYKRKT-------LFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGL 361
+ MKN+I L++DY+ T +F+SDI G I + +GS ++E GSVEGL
Sbjct: 2230 DPEHMKNVIALAFDYRAGTSPGTPNRIFFSDIHFGNIQQINDDGSGRTTIVENVGSVEGL 2289
Query: 362 AYEYVHNYLYWTCNNDATINK--IDLDSPKA-QRIVVVRLGQHDKPRGIDIDSCDSRIYW 418
AY + LYWT +TI + +D P A +R V+ + D PR +D C + ++W
Sbjct: 2290 AYHRGWDTLYWTSYTTSTITRHTVDQTRPGAFERETVITMSGDDHPRAFVLDECQNLMFW 2349
Query: 419 TNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDG 478
TNWN PSI RA SG ++I DI PN LA+DH+AEKL++ DA LDKIERC+YDG
Sbjct: 2350 TNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDG 2409
Query: 479 TNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI-RRPMGIV 537
++R V+ K P+HPF +AVYGE IFWTDWV AV RANKY G ++ LR +I ++PMGI+
Sbjct: 2410 SHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKYVGSDMKLLRVDIPQQPMGII 2469
Query: 538 AISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHD 597
A++++ ++C +PCR NG C D+C L G V CSC G++L ED +N+ C D
Sbjct: 2470 AVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQEDFTCRAVNSSCRAQD 2529
Query: 598 -FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
F+C++G CI F+ TCD V +C DKSDE YC R C+ + +C+N +C+
Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCNNGRCV 2580
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 176/635 (27%), Positives = 295/635 (46%), Gaps = 87/635 (13%)
Query: 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFM 69
Q +I +L+ Y I+S D ++ + A + +++WS+V Q I+ AF+
Sbjct: 1591 QMEIRGVDLDAPYYNYIISFTVPDIDNVTVLDYDAR---EQRVYWSDVRTQA--IKRAFI 1645
Query: 70 DGTKRETVVSQKKYPAVTACNLH-IAVDWIAQNIYWS--DPKENVIEVARLTGQYRYVLI 126
+GT ETVVS P N H +AVDW+++N++W+ D + I VARL G ++ ++
Sbjct: 1646 NGTGVETVVS-ADLP-----NAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVV 1699
Query: 127 SGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKF 186
G ++QP L V P G L+W++ I + A +DG T+L P+ L + F
Sbjct: 1700 QG-LEQPHGLVVHPLRGKLYWTDGDNISM---ANMDGSNHTLLFSGQKGPVG---LAIDF 1752
Query: 187 FSAFYRNLSKGNIHIISLSNL--SDVSTI-----------SMKPYGD------------- 220
+ +S GN H I+ NL S++ I ++ GD
Sbjct: 1753 PESKLYWISSGN-HTINRCNLDGSELEVIDTMRSQLGKATALAIMGDKLWWADQVSEKMG 1811
Query: 221 -----------------SYLKDIKIYSKDAQ---TGTNPCGVNNGGCAELCLYNG-VSAV 259
+ + +K+Y + Q GTNPC VNNG C++LCL +
Sbjct: 1812 TCNKADGSGSVVLRNSTTLVMHMKVYDESIQLEHEGTNPCSVNNGDCSQLCLPTSETTRS 1871
Query: 260 CACAHGVVAQDG-KSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIE 318
C C G + G ++C +F++YS I I + D +D + + +++ +
Sbjct: 1872 CMCTAGYSLRSGQQACEGVGSFLLYSVHEGIRGIPL-DPNDKSDALVPVSGTSLA---VG 1927
Query: 319 LSYDYKRKTLFYSDIQKGTINSVFFNGS-NHRVLLERQGSVEGLAYEYVHNYLYWTCNND 377
+ + + T+++ D+ TI+ + + V+ G VEG+A +++ +YWT D
Sbjct: 1928 IDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWT---D 1984
Query: 378 ATINKIDLDSPKAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF 436
+ I++ R VV+ G DKPR I + ++WT W H P I+R+ G
Sbjct: 1985 QGFDVIEVARLNGSFRYVVISQGL-DKPRAITVHPEKGYLFWTEW-GHYPRIERSRLDGT 2042
Query: 437 GTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD-GTNRIVLSKISPLHPFDM 495
++ I+ PN +++D+Q KL+W DAR+DKIER D + G NR V+ + + F +
Sbjct: 2043 ERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREVVLSSNNMDMFSV 2102
Query: 496 AVYGEFIFWTDWVIHA---VLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCR 552
+V+ +FI+W+D HA + R K + LR I + + + + C
Sbjct: 2103 SVFEDFIYWSD-RTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFNRDRQKGTNVCA 2161
Query: 553 HLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
NG C +C GQ C+C G +L ED SC
Sbjct: 2162 VANGGCQQLCLYRGGGQRACACAHG-MLAEDGASC 2195
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 205/415 (49%), Gaps = 35/415 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQDG-----KSCSEYDAFIMYSRVNRIDSIHMTDKSDLN 301
C++LC+ S C C G + G K+ ++ + F++++ + +++
Sbjct: 2993 CSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLDGS---- 3048
Query: 302 SPFESIRNSTMMK----NIIELSYDYKRKTLFYSDI--QKGTINSVFFNGSNHRVLLERQ 355
N T++K N + L +DY+ + ++++D+ Q I + NGSN +VL R
Sbjct: 3049 -------NYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVL-HRT 3100
Query: 356 G--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
G + +GLA ++V LYW TI L+ A R V+V G + PR + +D +
Sbjct: 3101 GLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNG--AYRTVLVSSGLRE-PRALVVDVQN 3157
Query: 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIER 473
+YWT+W H I R G G I+ T IT PN L +D+ E+++W DAR D IE
Sbjct: 3158 GYLYWTDWGDH-SLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEF 3216
Query: 474 CDYDGTNR-IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532
DG+NR +VLS+ P H F + ++ ++++WTDW ++ RA+K TG L + R
Sbjct: 3217 ASLDGSNRHVVLSQDIP-HIFALTLFEDYVYWTDWETKSINRAHKTTGANKTLLISTLHR 3275
Query: 533 PMGI-VAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINT 591
PM + V + PC+ NG C ++C L G C+C T L D R+C N
Sbjct: 3276 PMDLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLGGDGRTCVSN- 3334
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
C+ F C + CIPF CD +C D SDE C CRPG F+C C
Sbjct: 3335 -CTASQFVCKNDKCIPFWWKCDTEDDCGDHSDE-PPDCPEFKCRPGQFQCSTGIC 3387
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 160/631 (25%), Positives = 273/631 (43%), Gaps = 81/631 (12%)
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
+A+DW+ N Y+ D ++ I V G L+ + P +A+DP G +F+++ G
Sbjct: 285 QMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGKVFFTDYG 344
Query: 152 KIPLIARAGLDGKKQTILA-QEIIMP---IKDITLDLKFFSAFYRNL-------SKGNIH 200
+IP + R +DG+ +T L +I+ P D+ L +++ Y + KG
Sbjct: 345 QIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQT 404
Query: 201 II------------------------SLSNLSDVSTISMKPYGDSYLK---------DIK 227
II + + S I + + + + +
Sbjct: 405 IIQGILIEHLYGLTVFENYLYATNSDNANTQQKTSVIRVNRFNSTEYQVVTRVDKGGALH 464
Query: 228 IYSKDAQTGTNPCGVNN------GGCAELCLY--NGVSAVCACAHGV-VAQDGKSCS--E 276
IY + Q N GGC+++CL + + C C G + DGKSC E
Sbjct: 465 IYHQRRQPRVRSHACENDQYGKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPE 524
Query: 277 YDAFIMYS--RVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ 334
++ F++Y R I + M K P E + + N L + + ++++D
Sbjct: 525 HELFLVYGKGRPGIIRGMDMGAKV----PDEHMIPIENLMNPRALDFHAETGFIYFADTT 580
Query: 335 KGTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCNN-DATINKIDLDSPKAQR 392
I +G+ +L+ +VEG+A +++ + LYWT + TI+ L+ R
Sbjct: 581 SYLIGRQKIDGTERETILKDGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTR 640
Query: 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNW-----NSHLPSIQRAFFSGFGTESIITTDIT 447
++ G+ PR I +D + +YWT+W +S ++RA+ G + +T+
Sbjct: 641 KTLIE-GKMTHPRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTV 699
Query: 448 M-PNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPL-HPFDMAVYGEFIFWT 505
+ PN L+LD A +L+W DA D+IE +GT+R ++ + L H F + +G ++FWT
Sbjct: 700 LWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWT 759
Query: 506 DWVIHAVLRANK--YTGEEVYTLRKNIRRPMGIVAISDNLDACAKT-PCRHLNGNCDDIC 562
++ +V R + TL ++ R P+ + + D T CR NG C +C
Sbjct: 760 EYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLC 819
Query: 563 KLDETGQVVCSCFTGKVLMEDNRSCTINTV------CSEHDFKCSDGMCIPFNQTCDRVY 616
L G C+C +VL D +C N C +F C++ CI CD
Sbjct: 820 -LATPGSRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANNRCIQERWKCDGDN 878
Query: 617 NCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
+C D SDE C C FKC+NN+CI
Sbjct: 879 DCLDNSDEAPALCHQHTCPSDRFKCENNRCI 909
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 256/610 (41%), Gaps = 102/610 (16%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDG--TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
+ ++W++V + + +G T E V+ +Y T L AVDWIA NIYW +
Sbjct: 1309 QSALYWTDVVEDKIYRGKLLDNGALTSFEVVI---QYGLATPEGL--AVDWIAGNIYWVE 1363
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKK 165
+ IEVA+L G R L++G ++ P A+A+DP G LFW++ +P I A + G
Sbjct: 1364 SNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAG 1423
Query: 166 QTILAQEIIMPIKDITLDLKFFS-----------AFYRNLSKGNIHIISLS--------- 205
+ + +E L + + A Y G+ H+ L
Sbjct: 1424 RRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPF 1483
Query: 206 ----------------------------NLSDVSTISMKPYGDSYLKDIKIYSKDAQT-G 236
N++ V + +P+ D+++Y Q
Sbjct: 1484 AVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPF------DLQVYHPSRQPMA 1537
Query: 237 TNPCGVNNG--GCAELCLYNGVSAV-CACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSI 292
NPC N G C+ LCL N V CAC H + + +D +C E+ F++Y+R I +
Sbjct: 1538 PNPCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFKKFLLYARQMEIRGV 1597
Query: 293 HMTDKSDLNSPFES-IRNSTM--MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-H 348
DL++P+ + I + T+ + N+ L YD + + +++SD++ I F NG+
Sbjct: 1598 ------DLDAPYYNYIISFTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVE 1651
Query: 349 RVLLERQGSVEGLAYEYVHNYLYWTC--NNDATINKIDLDSPKAQRIVVVRLGQHDKPRG 406
V+ + GLA ++V L+WT N IN LD + VV L Q P G
Sbjct: 1652 TVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDG-SFKNAVVQGLEQ---PHG 1707
Query: 407 IDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466
+ + ++YWT+ + +I A G +++ + P LA+D KL+W +
Sbjct: 1708 LVVHPLRGKLYWTDGD----NISMANMDG-SNHTLLFSGQKGPVGLAIDFPESKLYWISS 1762
Query: 467 RLDKIERCDYDG-------TNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYT 519
I RC+ DG T R L K + L A+ G+ ++W D V + NK
Sbjct: 1763 GNHTINRCNLDGSELEVIDTMRSQLGKATAL-----AIMGDKLWWADQVSEKMGTCNKAD 1817
Query: 520 GEEVYTLRKN--IRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTG 577
G LR + + M + S L+ PC NG+C +C C C G
Sbjct: 1818 GSGSVVLRNSTTLVMHMKVYDESIQLEHEGTNPCSVNNGDCSQLCLPTSETTRSCMCTAG 1877
Query: 578 KVLMEDNRSC 587
L ++C
Sbjct: 1878 YSLRSGQQAC 1887
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 31/359 (8%)
Query: 247 CAELCLYNGVSAVCACAHG-VVAQDGKSCSEYDAF---IMYS---RVNRIDSIHMTDKSD 299
C++ C N S C+C G V+ DG+SC D F I++S + RID +H D S
Sbjct: 1234 CSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNRHEIRRID-LHKGDYSV 1292
Query: 300 LNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI--NSVFFNG---SNHRVLLER 354
L ++N I L + + L+++D+ + I + NG S V+
Sbjct: 1293 L---------VPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFEVVIQYG 1343
Query: 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS 414
+ EGLA +++ +YW ++ +++I++ + G + PR I +D D
Sbjct: 1344 LATPEGLAVDWIAGNIYWV---ESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDG 1400
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESI--ITTDITMPNALALDHQAEKLFWGDARLDKIE 472
++WT+W++ LP I+ A SG G +I T PN L +D+ +++ W DAR D I
Sbjct: 1401 ILFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1460
Query: 473 RCDYDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
YDG+ + + + HPF + +YG ++WTDW + + +ANK+TG V +++
Sbjct: 1461 SARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1520
Query: 531 RRPMGIVAISDNLDACAKTPCRHLNGN--CDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
+P + + A PC G C +C ++ V C+C L +DN +C
Sbjct: 1521 TQPFDLQVYHPSRQPMAPNPCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDNTTC 1579
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 47/265 (17%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W++VT Q I ++G+ + V+ + +AVDW+ N+YW D +
Sbjct: 3072 IYWTDVTTQGSMIRRMHLNGSNVQ-VLHRTGLSNPDG----LAVDWVGGNLYWCDKGRDT 3126
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEV++L G YR VL+S G+ +P AL VD ++GYL+W++ G LI R G+DG ++I+
Sbjct: 3127 IEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSLIGRIGMDGSGRSIIVD 3186
Query: 172 EIIMPIKDITLD---------------LKFFSAFYRN----LSKGNIHIISLS------- 205
I +T+D ++F S N LS+ HI +L+
Sbjct: 3187 TKITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIPHIFALTLFEDYVY 3246
Query: 206 ---------NLSDVSTISMKPYGDSYLK---DIKIYS--KDAQTGTNPCGVNNGGCAELC 251
N + +T + K S L D+ ++ + +PC VNNGGC+ LC
Sbjct: 3247 WTDWETKSINRAHKTTGANKTLLISTLHRPMDLHVFHALRQPDVPNHPCKVNNGGCSNLC 3306
Query: 252 LYN-GVSAVCACAHGV-VAQDGKSC 274
L + G CAC + DG++C
Sbjct: 3307 LLSPGGGHKCACPTNFYLGGDGRTC 3331
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 160/367 (43%), Gaps = 40/367 (10%)
Query: 245 GGCAELCLYNGVSAVCACA------HGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKS 298
G C++LC +C+CA H +G SEY + + N I S+
Sbjct: 3833 GTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEG---SEYQVLYI-ADDNEIRSLF---PG 3885
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTIN-------SVFFNGSNHRVL 351
+S +E I + K +++++ GTI+ + + HR
Sbjct: 3886 HPHSAYEQTFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQ 3945
Query: 352 LERQGS---------VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHD 402
++R + G+A ++V +YWT D+ + I++ K + + G D
Sbjct: 3946 IDRGVTHLNISGLKMPRGIAIDWVAGNVYWT---DSGRDVIEVAQMKGENRKTLISGMID 4002
Query: 403 KPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLF 462
+P I +D +YW++W +H P I+ A G E+++ +I P LA+D+ E+L+
Sbjct: 4003 EPHAIVVDPLRGTMYWSDWGNH-PKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLY 4061
Query: 463 WGDARLDKIERCDYDGTNRIVL--SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTG 520
W DA+L I +GT+ IV SK HPF + V+ ++I+ ++ + V + +K+
Sbjct: 4062 WADAKLSVIGSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGH 4121
Query: 521 EEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580
+ L + +V + PC C+ +C L +G VC+C GK L
Sbjct: 4122 SPLINLTGGLSHASDVVLYHQHKQPEVTNPCDRK--KCEWLCLLSPSGP-VCTCPNGKRL 4178
Query: 581 MEDNRSC 587
DN +C
Sbjct: 4179 --DNGTC 4183
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 61/301 (20%)
Query: 22 YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81
Y+ T +ES +I ++ V G+++W+N TI + T ++
Sbjct: 3891 YEQTFQGDES------VRIDAMDVHVKAGRVYWTNW--HTGTISYRSLPPAAPPTTSNRH 3942
Query: 82 KYP---AVTACNLH-------IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVD 131
+ VT N+ IA+DW+A N+YW+D +VIEVA++ G+ R LISG +D
Sbjct: 3943 RRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGENRKTLISGMID 4002
Query: 132 QPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFY 191
+P A+ VDP G ++WS+ G P I A +DG + L Q+ I + +D ++
Sbjct: 4003 EPHAIVVDPLRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYW 4062
Query: 192 RNL---------------------SKGNIHIISLSNLSD----VSTISMKPY-------- 218
+ +G H S+ D V+ I+ + +
Sbjct: 4063 ADAKLSVIGSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHS 4122
Query: 219 -------GDSYLKDIKIYSKDAQTG-TNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQD 270
G S+ D+ +Y + Q TNPC + C LCL + VC C +G +
Sbjct: 4123 PLINLTGGLSHASDVVLYHQHKQPEVTNPC--DRKKCEWLCLLSPSGPVCTCPNGKRLDN 4180
Query: 271 G 271
G
Sbjct: 4181 G 4181
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 592 VCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C +F+C D G CIP CD +C D SDE C R C P F+C NN+C+
Sbjct: 3494 TCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCV 3550
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 586 SCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNK 645
C N+ C + +F C + +CIP + CD +C D SDE C C P F+C N +
Sbjct: 2812 GCLYNSTCDDREFMCQNRLCIPKHFVCDHDRDCADGSDESP-ECEYPTCGPNEFRCANGR 2870
Query: 646 CILS 649
C+ S
Sbjct: 2871 CLSS 2874
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP-GYFK 640
E N +C+ T C + F C+ G CIP + TCD +C D+SDE CA C P F
Sbjct: 927 ESNATCSART-CPPNQFSCASGRCIPISWTCDLDDDCGDRSDESA-SCAYPTCFPLTQFT 984
Query: 641 CDNNKCI 647
C+N +CI
Sbjct: 985 CNNGRCI 991
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + CT C F+C G CIP CD +C D SDE +R C F+C+
Sbjct: 3606 DEKDCTPR--CDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCN 3663
Query: 643 NNKC 646
N C
Sbjct: 3664 NTLC 3667
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + F+C + C+P CD +C D SDE C R C F C N +CI
Sbjct: 3536 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDE--ESCTPRPCSESEFSCANGRCI 3589
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 93 IAVDW-IAQN-IYWSDPKENVIEVARLTGQYRY----VLISGGVDQPSALAVDPESGYLF 146
IA+D+ ++Q+ +YW+D E+ I +L V+I G+ P LAVD +G ++
Sbjct: 1301 IALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFEVVIQYGLATPEGLAVDWIAGNIY 1360
Query: 147 WSESGKIPLIARAGLDGK-KQTILAQEIIMPIKDITLDLKFFSAFY 191
W ES + I A LDG + T+LA +I P + I LD + F+
Sbjct: 1361 WVES-NLDQIEVAKLDGTLRTTLLAGDIEHP-RAIALDPRDGILFW 1404
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 50/135 (37%), Gaps = 24/135 (17%)
Query: 507 WVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDE 566
WV Y+ E K R P+ N AC C ++ CD K D+
Sbjct: 2672 WVCDGANDCGDYSDERDCPGVKRPRCPL-------NYFACPSGRCIPMSWTCD---KEDD 2721
Query: 567 TGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGI 626
C G ED C N CSE F+C + CI CD +C D SDE
Sbjct: 2722 -------CENG----EDETHC--NKFCSEAQFECQNHRCISKQWLCDGSDDCGDGSDEAA 2768
Query: 627 LYCAMRDCRPGYFKC 641
+C + C P F C
Sbjct: 2769 -HCEGKTCGPSSFSC 2782
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
CS FKC+ G CIP + TCD +C D SDE C + RP
Sbjct: 1016 CSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRP 1059
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + F C G CIP + TCD+ +C + DE +C + C F+C N++CI
Sbjct: 2697 CPLNYFACPSGRCIPMSWTCDKEDDCENGEDE--THCN-KFCSEAQFECQNHRCI 2748
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFK 599
SD + C + C NG C C + +VCSC G L DN +C I + C++H K
Sbjct: 1177 SDEGELCDQ--CSLNNGGCSHNCSVAPGEGIVCSCPLGMELGSDNHTCQIQSYCAKH-LK 1233
Query: 600 CS 601
CS
Sbjct: 1234 CS 1235
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKCDNNKCIL 648
C +F+C++ +C P CD +C D SDE CA C P F+C N++ L
Sbjct: 3654 TCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECARFICPPNRPFRCKNDRVCL 3711
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
T C +F+C DG CI + C++ +C D SDE + C+ DC YF+
Sbjct: 2604 TACGVGEFRCRDGSCIGNSSRCNQFVDCEDASDE--MNCSATDCS-SYFR 2650
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 582 EDNRSCTINTVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED R C C+ + F+CS CIP CDR +C D SDE C C F+
Sbjct: 3444 EDERDCP-EVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDE-PANCTQMTCGVDEFR 3501
Query: 641 C-DNNKCI 647
C D+ +CI
Sbjct: 3502 CKDSGRCI 3509
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 593 CSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKC-DNNKCI 647
C +F+C DG+CIP CD +C D SDE C P F C D+ +CI
Sbjct: 1063 CHSDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGVTHVCDPNVKFGCKDSARCI 1120
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 592 VCSEHDFKCSDGMCIPFNQ-TCDRVYNCHDKSDE 624
C ++F+C++G C+ Q CD +CHD SDE
Sbjct: 2858 TCGPNEFRCANGRCLSSRQWECDGENDCHDHSDE 2891
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/651 (40%), Positives = 376/651 (57%), Gaps = 62/651 (9%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W V + TI A D T RE VV+ IAVDWIA NIYW+D +V
Sbjct: 1936 IYW--VDMGLSTISRAKRDQTWREDVVTNGIGRVEG-----IAVDWIAGNIYWTDQGFDV 1988
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEVARL G +RYV+IS G+D+P A+ V PE GYLFW+E G+ P I R+ LDG ++ +L
Sbjct: 1989 IEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGTERVVLVN 2048
Query: 172 EIIMPIKDITLDLKFFSAFYRN--------------------LSKGNIHIISLSNLSDVS 211
I I++D + ++ + LS N+ + S+S D
Sbjct: 2049 VSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVLSSNNMDMFSVSVFEDFI 2108
Query: 212 TISMKPYGDS----------------------YLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
S + + + LKDIK++++D Q GTN C V NGGC +
Sbjct: 2109 YWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFNRDRQKGTNVCAVANGGCQQ 2168
Query: 250 LCLYNGVSA-VCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIR 308
LCLY G CACAHG++A+DG SC EY +++YS + SIH++D+ +LN+P +
Sbjct: 2169 LCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTILKSIHLSDERNLNAPVQPFE 2228
Query: 309 NSTMMKNIIELSYDYKRKT-------LFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGL 361
+ MKN+I L++DY+ T +F+SDI G I + +GS ++E GSVEGL
Sbjct: 2229 DPEHMKNVIALAFDYRAGTSPGTPNRIFFSDIHFGNIQQINDDGSRRITIVENVGSVEGL 2288
Query: 362 AYEYVHNYLYWTCNNDATINK--IDLDSPKA-QRIVVVRLGQHDKPRGIDIDSCDSRIYW 418
AY + LYWT +TI + +D P A +R V+ + D PR +D C + ++W
Sbjct: 2289 AYHRGWDTLYWTSYTTSTITRHTVDQTRPGAFERETVITMSGDDHPRAFVLDECQNLMFW 2348
Query: 419 TNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDG 478
TNWN PSI RA SG ++I DI PN LA+DH+AEKL++ DA LDKIERC+YDG
Sbjct: 2349 TNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDG 2408
Query: 479 TNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI-RRPMGIV 537
++R V+ K P+HPF +AVYGE IFWTDWV AV RANK+ G + LR +I ++PMGI+
Sbjct: 2409 SHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKHVGSNMKLLRVDIPQQPMGII 2468
Query: 538 AISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHD 597
A++++ ++C +PCR NG C D+C L G V CSC G++L +D +N+ C D
Sbjct: 2469 AVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQDDLTCRAVNSSCRAQD 2528
Query: 598 -FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
F+C++G CI F+ TCD V +C DKSDE YC R C+ + +C N +C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSNGRCV 2579
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 173/635 (27%), Positives = 292/635 (45%), Gaps = 87/635 (13%)
Query: 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFM 69
Q +I +L+ Y I+S D ++ + A + +++WS+V Q I+ AF+
Sbjct: 1590 QMEIRGVDLDAPYYNYIISFTVPDIDNVTVLDYDAR---EQRVYWSDVRTQA--IKRAFI 1644
Query: 70 DGTKRETVVSQKKYPAVTACNLH-IAVDWIAQNIYWS--DPKENVIEVARLTGQYRYVLI 126
+GT ETVVS P N H +AVDW+++N++W+ D + I VARL G ++ ++
Sbjct: 1645 NGTGVETVVS-ADLP-----NAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVV 1698
Query: 127 SGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKF 186
G ++QP L V P G L+W++ I + A +DG +T+L P+ L + F
Sbjct: 1699 QG-LEQPHGLVVHPLRGKLYWTDGDNISM---ANMDGSNRTLLFSGQKGPVG---LAIDF 1751
Query: 187 FSAFYRNLSKGNIHIISLSNLSDVS-------------TISMKPYGD------------- 220
+ +S GN H I+ NL ++ GD
Sbjct: 1752 PESKLYWISSGN-HTINRCNLDGSGLEVIDAMRSQLGKATALAIMGDKLWWADQVSEKMG 1810
Query: 221 -----------------SYLKDIKIYSKDAQ---TGTNPCGVNNGGCAELCLYNG-VSAV 259
+ + +K+Y + Q GTNPC VNNG C++LCL +
Sbjct: 1811 TCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDHKGTNPCSVNNGDCSQLCLPTSETTRS 1870
Query: 260 CACAHGVVAQDG-KSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIE 318
C C G + G ++C +F++YS I I + D +D + + +++ +
Sbjct: 1871 CMCTAGYSLRSGQQACEGVGSFLLYSVHEGIRGIPL-DPNDKSDALVPVSGTSLA---VG 1926
Query: 319 LSYDYKRKTLFYSDIQKGTINSVFFNGS-NHRVLLERQGSVEGLAYEYVHNYLYWTCNND 377
+ + + T+++ D+ TI+ + + V+ G VEG+A +++ +YWT D
Sbjct: 1927 IDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWT---D 1983
Query: 378 ATINKIDLDSPKAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF 436
+ I++ R VV+ G DKPR I + ++WT W + P I+R+ G
Sbjct: 1984 QGFDVIEVARLNGSFRYVVISQGL-DKPRAITVHPEKGYLFWTEWGQY-PRIERSRLDGT 2041
Query: 437 GTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD-GTNRIVLSKISPLHPFDM 495
++ I+ PN +++D+Q KL+W DAR DKIER D + G NR V+ + + F +
Sbjct: 2042 ERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVLSSNNMDMFSV 2101
Query: 496 AVYGEFIFWTDWVIHA---VLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCR 552
+V+ +FI+W+D HA + R +K + LR I + + + + C
Sbjct: 2102 SVFEDFIYWSD-RTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFNRDRQKGTNVCA 2160
Query: 553 HLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
NG C +C GQ C+C G +L ED SC
Sbjct: 2161 VANGGCQQLCLYRGRGQRACACAHG-MLAEDGASC 2194
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 203/415 (48%), Gaps = 35/415 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQDG-----KSCSEYDAFIMYSRVNRIDSIHMTDKSDLN 301
C++ C+ S C C G + G K+ ++ + F++++ + +++
Sbjct: 2992 CSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLDGS---- 3047
Query: 302 SPFESIRNSTMMK----NIIELSYDYKRKTLFYSDI--QKGTINSVFFNGSNHRVLLERQ 355
N T++K N + L +DY+ + ++++D+ Q I + NGSN +VL R
Sbjct: 3048 -------NYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVL-HRT 3099
Query: 356 G--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
G + +GLA ++V LYW TI L+ A R V+V G + PR + +D +
Sbjct: 3100 GLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNG--AYRTVLVSSGLRE-PRALVVDVQN 3156
Query: 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIER 473
+YWT+W H I R G I+ T IT PN L LD+ E+++W DAR D IE
Sbjct: 3157 GYLYWTDWGDH-SLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEF 3215
Query: 474 CDYDGTNR-IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532
DG+NR +VLS+ P H F + ++ ++++WTDW ++ RA+K TG L + R
Sbjct: 3216 ASLDGSNRHVVLSQDIP-HIFALTLFEDYVYWTDWETKSINRAHKTTGTNKTLLISTLHR 3274
Query: 533 PMGI-VAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINT 591
PM + V + PC+ NG C ++C L G C+C T L D R+C N
Sbjct: 3275 PMDLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLGSDGRTCVSN- 3333
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
C+ F C + CIPF CD +C D SDE C CRPG F+C C
Sbjct: 3334 -CTASQFVCKNDKCIPFWWKCDTEDDCGDHSDE-PPDCPEFKCRPGQFQCSTGIC 3386
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 163/631 (25%), Positives = 273/631 (43%), Gaps = 81/631 (12%)
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
+A+DW+ N Y+ D ++ I V G L+ + P +A+DP G +F+++ G
Sbjct: 284 QMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGKVFFTDYG 343
Query: 152 KIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVS 211
+IP + R +DG+ +T L I+ ITLDL ++ + I ++ +
Sbjct: 344 QIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQT 403
Query: 212 TIS----MKPYG----DSYLKDIKIYSKDAQTGTNPCGVNN------------------- 244
I YG ++YL + +AQ T+ VN
Sbjct: 404 IIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALH 463
Query: 245 -----------------------GGCAELCLY--NGVSAVCACAHGV-VAQDGKSCS--E 276
GGC+++CL + + C C G + DGKSC E
Sbjct: 464 IYHQRRQPRVRSHACENDQYGKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPE 523
Query: 277 YDAFIMYS--RVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ 334
++ F++Y R I + M K P E + + N L + + ++++D
Sbjct: 524 HELFLVYGKGRPGIIRGMDMGAKV----PDEHMIPIENLMNPRALDFHAETGFIYFADTT 579
Query: 335 KGTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCNN-DATINKIDLDSPKAQR 392
I +G+ +L+ +VEG+A +++ + LYWT + TI+ L+ R
Sbjct: 580 SYLIGRQKIDGTERETILKDGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTR 639
Query: 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNW-----NSHLPSIQRAFFSGFGTESIITTDIT 447
++ G+ PR I +D + +YWT+W +S ++RA+ G + +T+
Sbjct: 640 KTLIE-GKMTHPRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTV 698
Query: 448 M-PNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPL-HPFDMAVYGEFIFWT 505
+ PN L+LD A +L+W DA D+IE +GT+R ++ + L H F + +G ++FWT
Sbjct: 699 LWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWT 758
Query: 506 DWVIHAVLRANKYTG--EEVYTLRKNIRRPMGIVAISDNLDACAKT-PCRHLNGNCDDIC 562
++ +V R + G TL ++ R P+ + + D T CR NG C +C
Sbjct: 759 EYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLC 818
Query: 563 KLDETGQVVCSCFTGKVLMEDNRSCTINTV------CSEHDFKCSDGMCIPFNQTCDRVY 616
L G C+C +VL D +C N C +F C++ CI CD
Sbjct: 819 -LATPGSRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDN 877
Query: 617 NCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
+C D SDE C C FKC+NN+CI
Sbjct: 878 DCLDNSDEAPALCHQHTCPSDRFKCENNRCI 908
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 153/605 (25%), Positives = 255/605 (42%), Gaps = 92/605 (15%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDG--TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
+ ++W++V + + +G T E V+ +Y T L AVDWIA NIYW +
Sbjct: 1308 QSALYWTDVVEDKIYRGKLLDNGALTSFEVVI---QYGLATPEGL--AVDWIAGNIYWVE 1362
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKK 165
+ IEVA+L G R L++G ++ P A+A+DP G LFW++ +P I A + G
Sbjct: 1363 SNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAG 1422
Query: 166 QTILAQEIIMPIKDITLDLKFFS-----------AFYRNLSKGNIHIISLS--------- 205
+ + +E L + + A Y G+ H+ L
Sbjct: 1423 RRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPF 1482
Query: 206 ----------------------------NLSDVSTISMKPYGDSYLKDIKIYSKDAQT-G 236
N++ V + +P+ D+++Y Q
Sbjct: 1483 AVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPF------DLQVYHPSRQPMA 1536
Query: 237 TNPCGVN--NGGCAELCLYNGVSAV-CACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSI 292
NPC N G C+ LCL N V CAC H + + +D +C E+ F++Y+R I +
Sbjct: 1537 PNPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFKKFLLYARQMEIRGV 1596
Query: 293 HMTDKSDLNSPFES-IRNSTM--MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-H 348
DL++P+ + I + T+ + N+ L YD + + +++SD++ I F NG+
Sbjct: 1597 ------DLDAPYYNYIISFTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVE 1650
Query: 349 RVLLERQGSVEGLAYEYVHNYLYWTC--NNDATINKIDLDSPKAQRIVVVRLGQHDKPRG 406
V+ + GLA ++V L+WT N IN LD + VV L Q P G
Sbjct: 1651 TVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDG-SFKNAVVQGLEQ---PHG 1706
Query: 407 IDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466
+ + ++YWT+ + +I A G +++ + P LA+D KL+W +
Sbjct: 1707 LVVHPLRGKLYWTDGD----NISMANMDG-SNRTLLFSGQKGPVGLAIDFPESKLYWISS 1761
Query: 467 RLDKIERCDYDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVY 524
I RC+ DG+ V+ + +A+ G+ ++W D V + +K G
Sbjct: 1762 GNHTINRCNLDGSGLEVIDAMRSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSV 1821
Query: 525 TLRKN--IRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLME 582
LR + + M + S LD PC NG+C +C C C G L
Sbjct: 1822 VLRNSTTLVMHMKVYDESIQLDHKGTNPCSVNNGDCSQLCLPTSETTRSCMCTAGYSLRS 1881
Query: 583 DNRSC 587
++C
Sbjct: 1882 GQQAC 1886
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 171/359 (47%), Gaps = 31/359 (8%)
Query: 247 CAELCLYNGVSAVCACAHG-VVAQDGKSCSEYDAF---IMYS---RVNRIDSIHMTDKSD 299
C++ C N S C+C G V+ DG+SC D F I++S + RID +H D S
Sbjct: 1233 CSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNRHEIRRID-LHKGDYSV 1291
Query: 300 LNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI--NSVFFNG---SNHRVLLER 354
L ++N I L + + L+++D+ + I + NG S V+
Sbjct: 1292 L---------VPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFEVVIQYG 1342
Query: 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS 414
+ EGLA +++ +YW ++ +++I++ + G + PR I +D D
Sbjct: 1343 LATPEGLAVDWIAGNIYWV---ESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDG 1399
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESI--ITTDITMPNALALDHQAEKLFWGDARLDKIE 472
++WT+W++ LP I+ A SG G ++ T PN L +D+ +++ W DAR D I
Sbjct: 1400 ILFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1459
Query: 473 RCDYDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
YDG+ + + + HPF + +YG ++WTDW + + +ANK+TG V +++
Sbjct: 1460 SARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1519
Query: 531 RRPMGIVAISDNLDACAKTPCRHLNGN--CDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
+P + + A PC G C +C ++ V C+C L +DN +C
Sbjct: 1520 TQPFDLQVYHPSRQPMAPNPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTC 1578
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 51/267 (19%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W++VT Q I ++G+ + V+ + +AVDW+ N+YW D +
Sbjct: 3071 IYWTDVTTQGSMIRRMHLNGSNVQ-VLHRTGLSNPDG----LAVDWVGGNLYWCDKGRDT 3125
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEV++L G YR VL+S G+ +P AL VD ++GYL+W++ G LI R G+DG ++++
Sbjct: 3126 IEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSLIGRIGMDGSSRSVIVD 3185
Query: 172 EIIMPIKDITLDL---KFFSAFYR-------NLSKGNIHIISLSNLSDVSTISMKP---- 217
I +TLD + + A R +L N H++ ++ + +++
Sbjct: 3186 TKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIPHIFALTLFEDYVY 3245
Query: 218 YGDSYLKDIKIYSKDAQTGTN----------------------------PCGVNNGGCAE 249
+ D K I K TGTN PC VNNGGC+
Sbjct: 3246 WTDWETKSINRAHK--TTGTNKTLLISTLHRPMDLHVFHALRQPDVPNHPCKVNNGGCSN 3303
Query: 250 LCLYN-GVSAVCACAHGV-VAQDGKSC 274
LCL + G CAC + DG++C
Sbjct: 3304 LCLLSPGGGHKCACPTNFYLGSDGRTC 3330
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 160/367 (43%), Gaps = 40/367 (10%)
Query: 245 GGCAELCLYNGVSAVCACA------HGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKS 298
G C++LC +C+CA H +G SEY + + N I S+
Sbjct: 3832 GTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEG---SEYQVLYI-ADDNEIRSLF---PG 3884
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTIN-------SVFFNGSNHRVL 351
+S +E I + K +++++ GTI+ + + HR
Sbjct: 3885 HPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQ 3944
Query: 352 LERQGS---------VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHD 402
++R + G+A ++V +YWT D+ + I++ K + + G D
Sbjct: 3945 IDRGVTHLNISGLKMPRGIAIDWVAGNVYWT---DSGRDVIEVAQMKGENRKTLISGMID 4001
Query: 403 KPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLF 462
+P I +D +YW++W +H P I+ A G E+++ +I P LA+D+ E+L+
Sbjct: 4002 EPHAIVVDPLRGTMYWSDWGNH-PKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLY 4060
Query: 463 WGDARLDKIERCDYDGTNRIVL--SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTG 520
W DA+L I +GT+ IV SK HPF + V+ ++I+ ++ + V + +K+
Sbjct: 4061 WADAKLSVIGSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGH 4120
Query: 521 EEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580
+ L + +V + PC C+ +C L +G VC+C GK L
Sbjct: 4121 SPLVNLTGGLSHASDVVLYHQHKQPEVTNPCDRK--KCEWLCLLSPSGP-VCTCPNGKRL 4177
Query: 581 MEDNRSC 587
DN +C
Sbjct: 4178 --DNGTC 4182
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 55/284 (19%)
Query: 39 KISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYP---AVTACNLH--- 92
+I ++ V G+++W+N TI + T ++ + VT N+
Sbjct: 3901 RIDAMDVHVKAGRVYWTNW--HTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLK 3958
Query: 93 ----IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWS 148
IA+DW+A N+YW+D +VIEVA++ G+ R LISG +D+P A+ VDP G ++WS
Sbjct: 3959 MPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLRGTMYWS 4018
Query: 149 ESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNL-------------- 194
+ G P I A +DG + L Q+ I + +D ++ +
Sbjct: 4019 DWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTD 4078
Query: 195 -------SKGNIHIISLSNLSD----VSTISMKPY---------------GDSYLKDIKI 228
+G H S+ D V+ I+ + + G S+ D+ +
Sbjct: 4079 PIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLVNLTGGLSHASDVVL 4138
Query: 229 YSKDAQTG-TNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDG 271
Y + Q TNPC + C LCL + VC C +G +G
Sbjct: 4139 YHQHKQPEVTNPC--DRKKCEWLCLLSPSGPVCTCPNGKRLDNG 4180
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 592 VCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C +F+C D G CIP CD +C D SDE C R C P F+C NN+C+
Sbjct: 3493 TCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCV 3549
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP-GYFK 640
E N +C+ T C + F C+ G CIP + TCD +C D+SDE CA C P F
Sbjct: 926 ESNATCSART-CPPNQFSCASGRCIPISWTCDLDDDCGDRSDESA-SCAYPTCFPLTQFT 983
Query: 641 CDNNKCI 647
C+N +CI
Sbjct: 984 CNNGRCI 990
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 586 SCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNK 645
C N+ C + +F C + CIP + CD +C D SDE C C P F+C N +
Sbjct: 2811 GCLYNSTCDDREFMCQNRQCIPKHFVCDHDRDCADGSDESP-ECEYPTCGPSEFRCANGR 2869
Query: 646 CILS 649
C+ S
Sbjct: 2870 CLSS 2873
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + CT C F+C G CIP CD +C D SDE +R C F+C+
Sbjct: 3605 DEKDCTPR--CDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCN 3662
Query: 643 NNKC 646
N C
Sbjct: 3663 NTLC 3666
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + F+C + C+P CD +C D SDE C R C F C N +CI
Sbjct: 3535 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDE--ESCTPRPCSESEFSCANGRCI 3588
Score = 40.0 bits (92), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 93 IAVDW-IAQN-IYWSDPKENVIEVARLTGQYRY----VLISGGVDQPSALAVDPESGYLF 146
IA+D+ ++Q+ +YW+D E+ I +L V+I G+ P LAVD +G ++
Sbjct: 1300 IALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFEVVIQYGLATPEGLAVDWIAGNIY 1359
Query: 147 WSESGKIPLIARAGLDGK-KQTILAQEIIMPIKDITLDLKFFSAFY 191
W ES + I A LDG + T+LA +I P + I LD + F+
Sbjct: 1360 WVES-NLDQIEVAKLDGTLRTTLLAGDIEHP-RAIALDPRDGILFW 1403
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
CS FKC+ G CIP + TCD +C D SDE C + RP
Sbjct: 1015 CSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRP 1058
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 51/141 (36%), Gaps = 24/141 (17%)
Query: 501 FIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDD 560
+ WV Y+ E K R P+ N AC C ++ CD
Sbjct: 2665 LCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPL-------NYFACPSGRCIPMSWTCD- 2716
Query: 561 ICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHD 620
K D+ C G ED C N CSE F+C + CI CD +C D
Sbjct: 2717 --KEDD-------CEHG----EDETHC--NKFCSEAQFECQNHRCISKQWLCDGSDDCGD 2761
Query: 621 KSDEGILYCAMRDCRPGYFKC 641
SDE +C + C P F C
Sbjct: 2762 GSDEAA-HCEGKTCGPSSFSC 2781
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
T C +F+C DG CI + C++ +C D SDE + C+ DC YF+
Sbjct: 2603 TACGVGEFRCRDGTCIGNSSRCNQFVDCEDASDE--MNCSATDCS-SYFR 2649
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKCDNNKCIL 648
C +F+C++ +C P CD +C D SDE CA C P F+C N++ L
Sbjct: 3653 TCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECARFVCPPNRPFRCKNDRVCL 3710
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
F C G CIP + TCD+ +C DE +C + C F+C N++CI
Sbjct: 2701 FACPSGRCIPMSWTCDKEDDCEHGEDE--THCN-KFCSEAQFECQNHRCI 2747
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCS 601
C NG C C + +VCSC G L DN +C I + C++H KCS
Sbjct: 1185 CSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTCQIQSYCAKH-LKCS 1234
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 582 EDNRSCTINTVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED R C C+ + F+CS CIP CDR +C D SDE C C F+
Sbjct: 3443 EDERDCP-EVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDE-PANCTQMTCGVDEFR 3500
Query: 641 C-DNNKCI 647
C D+ +CI
Sbjct: 3501 CKDSGRCI 3508
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 593 CSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKC-DNNKCI 647
C +F+C DG+CIP CD +C D SDE C P F C D+ +CI
Sbjct: 1062 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGVTHVCDPSVKFGCKDSARCI 1119
Score = 32.7 bits (73), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 592 VCSEHDFKCSDGMCIPFNQ-TCDRVYNCHDKSDE 624
C +F+C++G C+ Q CD +CHD+SDE
Sbjct: 2857 TCGPSEFRCANGRCLSSRQWECDGENDCHDQSDE 2890
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/608 (39%), Positives = 361/608 (59%), Gaps = 53/608 (8%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
IAVDWIA NIYW+D N+IEVARL G +RYV+IS G+DQP ++AV PE G LFW+E G+
Sbjct: 1958 IAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGLLFWTEWGQ 2017
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRN------------------- 193
+P I +A LDG ++ +L I I++D + ++ +
Sbjct: 2018 MPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREM 2077
Query: 194 -LSKGNIHIISLSNL------SD----------------VSTISMKPYGDSYLKDIKIYS 230
LS N+ + S++ SD TI+M+ LK++KI++
Sbjct: 2078 VLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKNDATETITMRTGLGVNLKEVKIFN 2137
Query: 231 KDAQTGTNPCGVNNGGCAELCLYNGVSA-VCACAHGVVAQDGKSCSEYDAFIMYSRVNRI 289
+ + GTN C +NGGC +LCLY G S CACAHG +A+DG +C ++ +++YS +
Sbjct: 2138 RVREKGTNVCARDNGGCKQLCLYRGNSRRTCACAHGYLAEDGVTCLRHEGYLLYSGRTIL 2197
Query: 290 DSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKT-----LFYSDIQKGTINSVFFN 344
SIH++D+++LNSP N KN+I L++DY ++ +FYSD G I + N
Sbjct: 2198 KSIHLSDETNLNSPIRPYENPRYFKNVIALAFDYNQRRKGTNRIFYSDAHFGNIQLIKDN 2257
Query: 345 GSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINK--IDLDSPKA-QRIVVVRLGQH 401
+ +V++E GSVEGLAY + LYWT + ++I + +D P A R V+ + +
Sbjct: 2258 WEDRQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSED 2317
Query: 402 DKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKL 461
D P + +D C + ++WTNWN PSI R+ +G + +++TDI PN L +D++AEKL
Sbjct: 2318 DHPHVLALDECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKL 2377
Query: 462 FWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGE 521
++ D L KIERC+YDG+ R V+ K P +AVY +IFW+DW A+LR+NKYTG
Sbjct: 2378 YFSDGSLGKIERCEYDGSQRHVIVKSGPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGG 2437
Query: 522 EVYTLRKNI-RRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580
+ LR +I +PMGI+A++++ ++C +PC LNG C D+C L G+V CSC ++L
Sbjct: 2438 DTKILRSDIPHQPMGIIAVANDTNSCELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRIL 2497
Query: 581 MEDNRSCTINTVCSEH-DFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYF 639
+EDNR T N+ C+ + +F+C +G CI + TCD + +C DKSDE +LYC R CR G+
Sbjct: 2498 LEDNRCVTKNSSCNAYSEFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFK 2557
Query: 640 KCDNNKCI 647
C N +CI
Sbjct: 2558 PCYNRRCI 2565
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 165/589 (28%), Positives = 279/589 (47%), Gaps = 77/589 (13%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYW--SDPK 108
+++W+++ Q TI+ AF++GT ETV+S + ++ +AVDW+++N+YW S+
Sbjct: 1619 RLYWTDIKTQ--TIKRAFINGTGLETVIS-RDIQSIRG----LAVDWVSRNLYWISSEFD 1671
Query: 109 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTI 168
E I VARL G + +I G +D+P LA P G L+W++ I + A +DG I
Sbjct: 1672 ETQINVARLDGSLKTSIIHG-IDKPQCLAAHPVRGKLYWTDGNTINM---ANMDGSNSKI 1727
Query: 169 LAQEIIMPIKDITLDLKFFSAFY----------RNLSKGNIHII---------------- 202
L Q P+ +++D ++ NL GN+ +I
Sbjct: 1728 LFQNQKEPVG-LSIDYVENKLYWISSGNGTINRCNLDGGNLEVIESMKEELTKATALTIM 1786
Query: 203 ------SLSNLSDVSTISMKPYGD--------SYLKDIKIYSKDAQTGTNPCGVNNGGCA 248
+ NL+ + T S + + S + +K+Y K+AQ G+N C +NNGGC+
Sbjct: 1787 DKKLWWADQNLAQLGTCSKRDGRNPTILRNKTSGVVHMKVYDKEAQQGSNSCQLNNGGCS 1846
Query: 249 ELCLYNG-VSAVCACAHGVVAQDGK-SCSEYDAFIMYSRVNRIDSIHM--TDKSDLNSPF 304
+LCL + C C G Q + SC ++F+MYS I I + +DK D P
Sbjct: 1847 QLCLPTSETTRTCMCTVGYYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPSDKMDALMPI 1906
Query: 305 ESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGS-NHRVLLERQGSVEGLAY 363
+ + + + + T++++D+ I+ + + ++ G VEG+A
Sbjct: 1907 SGTSFA------VGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIITNGLGRVEGIAV 1960
Query: 364 EYVHNYLYWTCNNDATINKIDLDSPKAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
+++ +YWT D N I++ R V++ G D+PR I + ++WT W
Sbjct: 1961 DWIAGNIYWT---DHGFNLIEVARLNGSFRYVIISQGL-DQPRSIAVHPEKGLLFWTEW- 2015
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD-GTNR 481
+P I +A G +++ I PN +++D++ KL+W DAR DKIER D + G NR
Sbjct: 2016 GQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNR 2075
Query: 482 IVLSKISPLHPFDMAVYGEFIFWTDWVIHA---VLRANKYTGEEVYTLRKNIRRPMGIVA 538
++ S + F +AV+G +I+W+D HA V R +K E T+R + + V
Sbjct: 2076 EMVLSGSNVDMFSVAVFGAYIYWSDRA-HANGSVRRGHKNDATETITMRTGLGVNLKEVK 2134
Query: 539 ISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
I + + C NG C +C + C+C G L ED +C
Sbjct: 2135 IFNRVREKGTNVCARDNGGCKQLCLYRGNSRRTCACAHG-YLAEDGVTC 2182
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 165/666 (24%), Positives = 277/666 (41%), Gaps = 122/666 (18%)
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
+A+DW+ +N+Y+ D + I V G LI + P A+AVDP +G LF+++ G
Sbjct: 287 QMAIDWLTRNLYFVDHVGDRIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKLFFTDYG 346
Query: 152 KIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVS 211
+ + R +DG +T + + LDL ++ +L + ++ + +
Sbjct: 347 NVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRHT 406
Query: 212 TISMKP----YGDSYLKD----------------------------------IKIYSKDA 233
I + YG + +D I+IY K
Sbjct: 407 VIQGRQVRHLYGITVFEDYLYATNSDNYNIVRINRFNGTDIHSLIKIENAWGIRIYQKRT 466
Query: 234 Q--TGTNPCGVNN----GGCAELCLYNGV--SAVCACAHGV-VAQDGKSCS--EYDAFIM 282
Q ++ C V+ GGC+ +CL + + C C G + DG+SC + + F+
Sbjct: 467 QPTVRSHACEVDPYGMPGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLF 526
Query: 283 YSR----VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI 338
Y + + R ++ + P E++ N + E +Y ++++D I
Sbjct: 527 YGKGRPGIVRGMDLNTKIADEYMIPIENLVNPRALDFHAETNY------IYFADTTSFLI 580
Query: 339 NSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCNNDA---TINKIDLDSPKAQRIV 394
+G+ +L+ +VEG+A +++ N LYWT ND TIN L+ R
Sbjct: 581 GRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWT--NDGHRKTINVARLEKASQSRKT 638
Query: 395 VVRLGQHDKPRGIDIDSCDSRIYWTNW-----NSHLPSIQRAFFSGFGTESIITTDITMP 449
++ G+ PRGI +D + +YWT+W + + I++A+ GF + +T+ + P
Sbjct: 639 LLE-GEMSHPRGIVVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWP 697
Query: 450 NALALDHQAEKLFWGDARLDKIERCDYDGTNR-IVLSKISPLHPFDMAVYGEFIFWTDWV 508
N L LD L+W DA D IE+ +GT+R IV S HPF ++ +G ++FWTD++
Sbjct: 698 NGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKIVYSGRELNHPFGLSHHGNYVFWTDYM 757
Query: 509 IHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETG 568
++ + + T E TL ++ R P+ + I D CR NG C +C L G
Sbjct: 758 NGSIFQLDLITSE--VTLLRHERPPLFGLQIYDPRKQQGDNMCRVNNGGCSTLC-LAIPG 814
Query: 569 QVVCSCFTGKVLMEDNRSCTINT------------------------------------- 591
VC+C ++L E+ +CT N
Sbjct: 815 GRVCACADNQLLDENGTTCTFNPGEALPHICKAGEFRCKNRHCIQARWKCDGDDDCLDGS 874
Query: 592 ----------VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
C + FKC + CIP CD +C DE C R C+ F C
Sbjct: 875 DEDSVNCFNHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSC 934
Query: 642 DNNKCI 647
N +CI
Sbjct: 935 GNGRCI 940
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 241/559 (43%), Gaps = 88/559 (15%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SG 151
+ VDWIA NIYW D + IEVA+L G R LI+G ++ P A+A+DP G LFW++
Sbjct: 1340 LTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWTDWDA 1399
Query: 152 KIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFS-----------AFYRNLSKGN-- 198
P I A + G + + +++ L + F A Y L G
Sbjct: 1400 NFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARSDAIYSALYDGTNM 1459
Query: 199 IHII---------------------------SLS--------NLSDVSTISMKPYGDSYL 223
I II +LS N+S + S +P+
Sbjct: 1460 IEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPF----- 1514
Query: 224 KDIKIYSKDAQ-TGTNPCGVNNGG--CAELCLYN-GVSAVCACAHGV-VAQDGKSCSEYD 278
D++IY Q NPC N+G C+ +CL N SA CAC H + ++ D K+C E
Sbjct: 1515 -DLQIYHPSRQPQAPNPCAANDGKGPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK 1573
Query: 279 AFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELS---YDYKRKTLFYSDIQK 335
F++Y+R + I + D+++P+ + + + +I +++ +D + L+++DI+
Sbjct: 1574 KFLLYARRSEIRGV------DIDNPYFNFITAFTVPDIDDVTVIDFDASEERLYWTDIKT 1627
Query: 336 GTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCN--NDATINKIDLDSPKAQR 392
TI F NG+ ++ R S+ GLA ++V LYW + ++ IN LD
Sbjct: 1628 QTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDGSLKTS 1687
Query: 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNAL 452
I+ DKP+ + ++YWT+ N +I A G ++ I+ + P L
Sbjct: 1688 II----HGIDKPQCLAAHPVRGKLYWTDGN----TINMANMDGSNSK-ILFQNQKEPVGL 1738
Query: 453 ALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISP--LHPFDMAVYGEFIFWTDWVIH 510
++D+ KL+W + I RC+ DG N V+ + + + + ++W D +
Sbjct: 1739 SIDYVENKLYWISSGNGTINRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLA 1798
Query: 511 AVLRANKYTGEEVYTLRKNIRRPMGIV--AISDNLDACAKTPCRHLNGNCDDICKLDETG 568
+ +K G LR + G+V + D C+ NG C +C
Sbjct: 1799 QLGTCSKRDGRNPTILRN---KTSGVVHMKVYDKEAQQGSNSCQLNNGGCSQLCLPTSET 1855
Query: 569 QVVCSCFTGKVLMEDNRSC 587
C C G L ++ SC
Sbjct: 1856 TRTCMCTVGYYLQKNRMSC 1874
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 177/363 (48%), Gaps = 31/363 (8%)
Query: 243 NNGGCAELCLYNGVSAVCACAHG-VVAQDGKSCSE---YDAFIMYS---RVNRIDSIHMT 295
N+ C+++C + + C+C G + DG+SC+ ++AFI++S + RID +H
Sbjct: 1220 NHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIRHEIRRID-LHKR 1278
Query: 296 DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSD-----IQKGTINSVFFNGSNHRV 350
D S L ++N I L + + + L+++D I +G ++ + V
Sbjct: 1279 DYSLL---------VPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIEVV 1329
Query: 351 LLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDID 410
+ + EGL +++ +YW D+ +++I++ + G + PR I +D
Sbjct: 1330 VEHGLATPEGLTVDWIAGNIYWI---DSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALD 1386
Query: 411 SCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDIT--MPNALALDHQAEKLFWGDARL 468
++WT+W+++ P I+ A SG G ++I T PN L +DH +++ W DAR
Sbjct: 1387 PRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARS 1446
Query: 469 DKIERCDYDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTL 526
D I YDGTN I + + HPF +++YG ++WTDW + + +ANK+TG+ V +
Sbjct: 1447 DAIYSALYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLSKANKWTGQNVSVI 1506
Query: 527 RKNIRRPMGIVAISDNLDACAKTPCRHLNGN--CDDICKLDETGQVVCSCFTGKVLMEDN 584
+K +P + + A PC +G C +C ++ C+C L D
Sbjct: 1507 QKTSAQPFDLQIYHPSRQPQAPNPCAANDGKGPCSHMCLINHNRSAACACPHLMKLSSDK 1566
Query: 585 RSC 587
++C
Sbjct: 1567 KTC 1569
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 184/417 (44%), Gaps = 34/417 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQDG-----KSCSEYDAFIMYSRVNRIDSIHMTDKSDLN 301
C++ C+ + C C G Q KS S+ + F++ + + I I TD S
Sbjct: 2978 CSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILADHHEIRKIS-TDGS--- 3033
Query: 302 SPFESIRNSTMMK----NIIELSYDYKRKTLFYSDIQK---GTINSVFFNGSNHRVLLER 354
N T++K N+I + +DY+ + +++ D + IN + NGS+ +V+
Sbjct: 3034 -------NYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDIKVV-HN 3085
Query: 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS 414
LA +++ LYW+ I L+ +V RL PR + +D
Sbjct: 3086 TAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRL---KFPRDLSLDPQAG 3142
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERC 474
+YW + + P I R G +I T I+ P AL +D+ +L+W D + IE
Sbjct: 3143 YLYWIDCCEY-PHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFS 3199
Query: 475 DYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPM 534
+ DG++R + + ++ ++I+WTD ++ RA+K +G + +L +
Sbjct: 3200 NMDGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLIYSWHAIT 3259
Query: 535 GI-VAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVC 593
I V S +K C NG C +C L C+C T L DNR+C N C
Sbjct: 3260 DIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTCLSN--C 3317
Query: 594 SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
+ F+C CIPF CD V +C D SDE C C+PG F+C C L +
Sbjct: 3318 TASQFRCKTDKCIPFWWKCDTVDDCGDGSDEPD-DCPEFRCQPGRFQCGTGLCALPA 3373
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 40/222 (18%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+AVDWI +N+YWSD ++ +IEV++L G Y +L+S + P L++DP++GYL+W + +
Sbjct: 3092 LAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQAGYLYWIDCCE 3151
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDL---KFFSA-----FYRNLSKGNIHIISL 204
P I R G+DG Q+++ + I +T+D + + A + N+ + H +
Sbjct: 3152 YPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADENHIEFSNMDGSHRHKVPN 3211
Query: 205 SNLSDVSTISM-------------------KPYGDSYLK---------DIKIYS--KDAQ 234
++ V +++ K G L DI++Y +
Sbjct: 3212 QDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLIYSWHAITDIQVYHSYRQPD 3271
Query: 235 TGTNPCGVNNGGCAELCLYN-GVSAVCACAHGV-VAQDGKSC 274
+ C +NNGGC+ LCL G + CAC +A D ++C
Sbjct: 3272 VSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTC 3313
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 379 TINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGT 438
+IN L+ P R++ G+ P I ++ +YWT H I+ A G
Sbjct: 4007 SINVGQLNGPNCTRLLTNMAGE---PYAIAVNPKRGMMYWTVVGDH-SHIEEAAMDGTLR 4062
Query: 439 ESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDG--TNRIVLSKISPLHPFDMA 496
++ ++ P LA+D+ +E+++W D L I YDG + V SK LHP +
Sbjct: 4063 RILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSSKQGLLHPHRID 4122
Query: 497 VYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNG 556
++ ++I+ + V R K+ V L NI + G++ PC L+
Sbjct: 4123 IFEDYIYGAG-PKNGVFRVQKFGHGSVEYLALNIDKTKGVLISHRYKQLDLPNPC--LDL 4179
Query: 557 NCDDICKLDETGQVVCSCFTGKVLM 581
C+ +C L+ +G C C GK L+
Sbjct: 4180 ACEFLCLLNPSG-ATCVCPEGKYLI 4203
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 179/474 (37%), Gaps = 98/474 (20%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
+I V L+G +TT+++ + +IA+ P G +FW++ IE A M G
Sbjct: 1358 QIEVAKLDGSLRTTLIA------GAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSG 1411
Query: 72 TKRETVVSQKKYPA----VTACNLHIAVDWI----------------------------- 98
R+T+ K A +T + + W
Sbjct: 1412 AGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARSDAIYSALYDGTNMIEIIRGHEYLSH 1471
Query: 99 -------AQNIYWSDPKENVIEVA-RLTGQYRYVLISGGVDQPSALAV-----DPESGYL 145
+YW+D + N + A + TGQ +I QP L + P++
Sbjct: 1472 PFAVSLYGSEVYWTDWRTNTLSKANKWTGQ-NVSVIQKTSAQPFDLQIYHPSRQPQAPNP 1530
Query: 146 FWSESGKIPLIARAGLDGKKQTILAQEIIMPI---KDITLDLKFFSAFYR-------NLS 195
+ GK P ++ + A +M + K ++K F + R ++
Sbjct: 1531 CAANDGKGPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMKKFLLYARRSEIRGVDID 1590
Query: 196 KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNG 255
+ I+ + D+ +++ + S + ++Y D +T T NG E +
Sbjct: 1591 NPYFNFITAFTVPDIDDVTVIDFDAS---EERLYWTDIKTQTIKRAFINGTGLETVISRD 1647
Query: 256 VSAVCACAHGVVAQDGK-SCSEYDAFIMYSRVNRIDS------IHMTDKSDLNSPFESIR 308
+ ++ A V+++ SE+D + V R+D IH DK
Sbjct: 1648 IQSIRGLAVDWVSRNLYWISSEFDETQI--NVARLDGSLKTSIIHGIDKPQC-------- 1697
Query: 309 NSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHN 368
L+ R L+++D TIN +GSN ++L + Q GL+ +YV N
Sbjct: 1698 ----------LAAHPVRGKLYWTD--GNTINMANMDGSNSKILFQNQKEPVGLSIDYVEN 1745
Query: 369 YLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
LYW + + TIN+ +LD + V+ + + + + D +++W + N
Sbjct: 1746 KLYWISSGNGTINRCNLD---GGNLEVIESMKEELTKATALTIMDKKLWWADQN 1796
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 93 IAVDWIAQNIYWSDPKEN---------------VIEVARLTGQYRYVLISGGVDQPSALA 137
IAVDW+A NIYW+D I V +L G L++ +P A+A
Sbjct: 3974 IAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIA 4033
Query: 138 VDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFS 188
V+P+ G ++W+ G I A +DG + IL Q+ + + +D +FS
Sbjct: 4034 VNPKRGMMYWTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVD--YFS 4082
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V L G T +L+N + + +IAV P +G M+W+ V IE A MDGT
Sbjct: 4008 INVGQLNGPNCTRLLTNMAGEPY------AIAVNPKRGMMYWT-VVGDHSHIEEAAMDGT 4060
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVI 112
R +V QK T +AVD+ ++ IYW+D + ++I
Sbjct: 4061 LRRILV-QKNLQRPTG----LAVDYFSERIYWADFELSII 4095
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP-GYFK 640
E N++CT T C F C +G CIP CDR +C D++DE + C C P F
Sbjct: 917 ESNQTCTART-CQVDQFSCGNGRCIPRAWLCDREDDCGDQTDE-MASCEFPTCEPLTQFV 974
Query: 641 CDNNKCILS 649
C + +CI S
Sbjct: 975 CKSGRCISS 983
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 593 CSEHDFKCSDGMCIPFNQ-TCDRVYNCHDKSDEGIL----YCAMRDCRPGYFKCDNNKCI 647
C +F C+DG C+ Q CD ++C D SDE L A + C +F C N +CI
Sbjct: 2845 CGTEEFSCADGRCLLNTQWQCDGDFDCPDHSDEAPLNPKCKSAEQSCNSSFFMCKNGRCI 2904
Query: 648 LSS 650
S
Sbjct: 2905 PSG 2907
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 582 EDNRSCTINTVCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED R C N+ CS F+C + CI CD +C D SDE C + C P F+
Sbjct: 3426 EDERDCPENS-CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA--NCDKKTCGPHEFQ 3482
Query: 641 CDNNKCI 647
C NN CI
Sbjct: 3483 CKNNNCI 3489
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D R+C T CS+ F+CS+G CIP CD +C DE A C + C
Sbjct: 3545 DERNC--ETSCSKDQFRCSNGQCIPAKWKCDGHEDCKYGEDEKSCEPASPTCSSREYICA 3602
Query: 643 NNKCILSS 650
++ CI +S
Sbjct: 3603 SDGCISAS 3610
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
C H+F+C + CIP + CD +C D SDE C + C F C N C+ S
Sbjct: 3475 TCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDE--ENCKPQTCTLKDFLCANGDCVSS 3530
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 591 TVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCIL 648
T C E F+C + CIP CD +++C D SDE CR F C+N+ C L
Sbjct: 3630 TECKEDQFRCKNKAHCIPIRWLCDGIHDCVDGSDEENCERGGNICRADEFLCNNSLCKL 3688
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCR--PGYFKCDNN 644
C + +F CS+ CIP + CDR+ +C D SDE + CR P + C++N
Sbjct: 3762 CKKDEFACSNKKCIPMDLQCDRLDDCGDGSDE-------QGCRIAPTEYTCEDN 3808
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
D C ++T C+ +F+C+DG CIP + C++ +C D SDE
Sbjct: 2582 DELDCKVST-CATVEFRCADGTCIPRSARCNQNIDCADASDE 2622
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCS 601
C NG C + C + +VCSC G L +DN++C I CS H KCS
Sbjct: 1176 CSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNH-LKCS 1225
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 592 VCSEHDFKCSDGM-CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
VC FKC+ CIP N C+ +C D+ DE C C P YF+C K +S
Sbjct: 3395 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDE--RDCPENSCSPDYFQCKTTKHCIS 3451
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD------CRPGYFKC 641
C ++ F+CS G CIP + CD +C D SDE + C + C F+C
Sbjct: 1006 CFDNQFRCSSGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQC 1060
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +C T C+ DF C++G C+ CD ++C D SDE C F+C
Sbjct: 3506 DEENCKPQT-CTLKDFLCANGDCVSSRFWCDGDFDCADGSDERN---CETSCSKDQFRCS 3561
Query: 643 NNKCI 647
N +CI
Sbjct: 3562 NGQCI 3566
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 582 EDNRSCT-INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED +SC + CS ++ C+ CI + C+ Y+C D SDE + C + +C+ F+
Sbjct: 3582 EDEKSCEPASPTCSSREYICASDGCISASLKCNGEYDCADGSDE--MDC-VTECKEDQFR 3638
Query: 641 CDN 643
C N
Sbjct: 3639 CKN 3641
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/649 (38%), Positives = 375/649 (57%), Gaps = 60/649 (9%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W+++ + I A D T +E VV+ IAVDWIA NIYW+D N+
Sbjct: 1924 IYWTDMG--LNKISRAKRDQTWKEDVVTNGLGRVEG-----IAVDWIAGNIYWTDHGFNL 1976
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171
IEVARL G +RYV+IS G+DQP ++AV PE G+LFW+E G++P I +A LDG ++ ++
Sbjct: 1977 IEVARLNGSFRYVIISQGLDQPRSIAVHPEKGFLFWTEWGQVPCIGKARLDGSEKVMIVS 2036
Query: 172 EIIMPIKDITLDLKFFSAFYRN--------------------LSKGNIHIISLSNL---- 207
I I++D + ++ + LS N+ + S++
Sbjct: 2037 VGITWPNGISIDYEENKLYWCDARSDKIERIDLDTGANREVLLSGSNVDLFSVAVFGAYI 2096
Query: 208 --SD----------------VSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
SD T++M+ LK+IKI+++ + GTN C NGGC +
Sbjct: 2097 YWSDRAHANGSVRRGHKNDATETVTMRTGLGVNLKEIKIFNRVREKGTNVCAKENGGCQQ 2156
Query: 250 LCLYNGVSA-VCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIR 308
LCLY G S CACAHG +A DG +C ++ +++YS + SIH++D+++LNSP
Sbjct: 2157 LCLYRGNSRRTCACAHGYLAGDGVTCLRHEGYLLYSGRTILKSIHLSDETNLNSPVRPYE 2216
Query: 309 NSTMMKNIIELSYDYKRKT-----LFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAY 363
N KNII L++DY ++ +FYSD G I + N + +V++E GSVEGLAY
Sbjct: 2217 NPNYFKNIIALAFDYNQRREGTNRIFYSDAHFGNIQLIKDNWEDRQVIVENVGSVEGLAY 2276
Query: 364 EYVHNYLYWTCNNDATINK--IDLDSPKA-QRIVVVRLGQHDKPRGIDIDSCDSRIYWTN 420
+ LYWT ++ ++I + +D P A R V+ + + D P + +D C + ++WTN
Sbjct: 2277 HRAWDTLYWTSSSTSSITRHTVDQTRPGAIDREAVITMSEDDHPHVLALDECQNLMFWTN 2336
Query: 421 WNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
WN PSI RA +G +++TDI PN L +DH+AEKL++ D L KIERC+YDG+
Sbjct: 2337 WNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQ 2396
Query: 481 RIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI-RRPMGIVAI 539
R V+ K P +AVY +IFW+DW A+LR+NKYTG E LR +I +PMGI+A+
Sbjct: 2397 RHVIVKSGPGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGIIAV 2456
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEH-DF 598
+++ ++C +PC LNG C D+C L G+V CSC +VL+ +NR T N+ C+ + +F
Sbjct: 2457 ANDTNSCELSPCALLNGGCHDLCLLTPDGRVNCSCRGDRVLLANNRCVTKNSSCNIYSEF 2516
Query: 599 KCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
+C +G C+ + TCD + +C DKSDE +LYC R CR G+ C N +C+
Sbjct: 2517 ECGNGDCVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCV 2565
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/589 (28%), Positives = 278/589 (47%), Gaps = 77/589 (13%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYW--SDPK 108
+++W+++ Q TI AF++GT ETV+S + ++ +AVDW+++N+YW S+
Sbjct: 1619 RLYWTDIKTQ--TITRAFINGTGLETVIS-RDIQSIRG----LAVDWVSRNLYWISSEFD 1671
Query: 109 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTI 168
E I VARL G + +I G +D+P LA P G L+W++ I + A +DG I
Sbjct: 1672 ETQINVARLDGSLKTSIIHG-IDKPQCLAAHPVRGKLYWTDGNTINM---ANMDGSNSKI 1727
Query: 169 LAQEIIMPIKDITLDLKFFSAFY----------RNLSKGNIHII---------------- 202
L Q P+ +++D ++ NL GN+ +I
Sbjct: 1728 LFQNQKEPVG-LSIDYVENKLYWISSGNGTINRCNLDGGNLEVIESMKEELTKATALTIM 1786
Query: 203 ------SLSNLSDVSTISMKP-YGDSYLKD-------IKIYSKDAQTGTNPCGVNNGGCA 248
+ NL+ + T + + S L++ +K+Y K+AQ G+N C VNNGGC+
Sbjct: 1787 DKKLWWADQNLAQLGTCNKRDGRNPSILRNKTSGVVHMKVYDKEAQQGSNSCQVNNGGCS 1846
Query: 249 ELCLYNG-VSAVCACAHGVVAQDGK-SCSEYDAFIMYSRVNRIDSIHMT--DKSDLNSPF 304
+LCL + C C G Q + SC ++F+MYS I I + DK D P
Sbjct: 1847 QLCLPTSETTRTCMCTVGYYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPRDKVDALMPI 1906
Query: 305 ESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGS-NHRVLLERQGSVEGLAY 363
+ + + + + T++++D+ I+ + + V+ G VEG+A
Sbjct: 1907 SGAAFA------VGIDFHAENDTIYWTDMGLNKISRAKRDQTWKEDVVTNGLGRVEGIAV 1960
Query: 364 EYVHNYLYWTCNNDATINKIDLDSPKAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
+++ +YWT D N I++ R V++ G D+PR I + ++WT W
Sbjct: 1961 DWIAGNIYWT---DHGFNLIEVARLNGSFRYVIISQGL-DQPRSIAVHPEKGFLFWTEW- 2015
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD-GTNR 481
+P I +A G I++ IT PN +++D++ KL+W DAR DKIER D D G NR
Sbjct: 2016 GQVPCIGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIERIDLDTGANR 2075
Query: 482 IVLSKISPLHPFDMAVYGEFIFWTDWVIHA---VLRANKYTGEEVYTLRKNIRRPMGIVA 538
VL S + F +AV+G +I+W+D HA V R +K E T+R + + +
Sbjct: 2076 EVLLSGSNVDLFSVAVFGAYIYWSDRA-HANGSVRRGHKNDATETVTMRTGLGVNLKEIK 2134
Query: 539 ISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
I + + C NG C +C + C+C G L D +C
Sbjct: 2135 IFNRVREKGTNVCAKENGGCQQLCLYRGNSRRTCACAHG-YLAGDGVTC 2182
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 168/674 (24%), Positives = 276/674 (40%), Gaps = 132/674 (19%)
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
+A DW+ +NIY+ D + I V G LI + P A+A DP +G LF+++ G
Sbjct: 287 QMAFDWLTRNIYFVDHVSDRIFVCNFNGSVCVTLIESELHNPKAIAADPIAGKLFFTDYG 346
Query: 152 KIPLIARAGLDGKKQTILAQEIIMPIKDITLDL--------------------------- 184
+P I R LDG +T + + LDL
Sbjct: 347 NVPKIERCDLDGMNRTRIVYSKAEQPSALALDLVNRLVYWVDLYLDYVGVVDYQGKNRHT 406
Query: 185 -------------KFFSAFYRNLSKGNIHIISLS--NLSDV-STISMKPYGDSYLKDIKI 228
F + S N +II ++ N +D+ S I M+ + I+
Sbjct: 407 IVQGRQVKHLYGITVFEDYLYATSSDNFNIIRINRFNGTDIHSIIKMES-----ARGIRT 461
Query: 229 YSKDAQ--TGTNPCGVNN----GGCAELCLYNGV--SAVCACAHGV-VAQDGKSCS--EY 277
Y K Q ++ C V+ GGC+ +CL + + C C G + DG+SC +
Sbjct: 462 YQKRTQPTVRSHACEVDAYGMPGGCSHICLLSSSYKTRTCRCRTGFNMGSDGRSCKRPKN 521
Query: 278 DAFIMYSR----VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDI 333
+ F+ Y + + R ++ + P E++ N + E +Y ++++D
Sbjct: 522 ELFLFYGKGRPGIVRGMDLNTKIADECMIPIENLVNPRALDFHAEANY------IYFADT 575
Query: 334 QKGTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCNNDA---TINKIDLDSPK 389
I +G+ +L+ +VEG+A +++ N LYWT ND TIN L+
Sbjct: 576 TSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWT--NDGHRKTINVARLEKAS 633
Query: 390 AQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNW-----NSHLPSIQRAFFSGFGTESIITT 444
R ++ G PR I +D + +YWT+W + + I++A+ G + +T+
Sbjct: 634 QSRKTLLE-GGMSHPRAIVVDPVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTS 692
Query: 445 DITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPL-HPFDMAVYGEFIF 503
+ PN L LD L+W DA D IE+ +GT+R V+ L HPF ++ +G ++F
Sbjct: 693 KMLWPNGLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVVYSGKELNHPFGLSHHGNYVF 752
Query: 504 WTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICK 563
WTD++ ++ + + T E TL ++ R P+ + I D CR NG C +C
Sbjct: 753 WTDYMNGSIFQLDLMTNE--VTLLRHERAPLFGLQIYDPRKQQGDNMCRINNGGCGTLCL 810
Query: 564 LDETGQVVCSCFTGKVLMEDNRSCTINT-------------------------------- 591
G+V C+C ++L E+ +CT N
Sbjct: 811 AIPAGRV-CACADNQLLDENGTTCTFNPEEIRFHICKPGEFRCKNKHCIQARWKCDGDDD 869
Query: 592 ---------------VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
C + FKC + CIP CD +C DE C R C+
Sbjct: 870 CLDGSDEDSVTCFNHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQA 929
Query: 637 GYFKCDNNKCILSS 650
F C N +CI ++
Sbjct: 930 DQFSCGNGRCIPTA 943
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 242/559 (43%), Gaps = 88/559 (15%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SG 151
+ VDWIA NIYW D + IEV++L G R LI+G ++ P A+A+DP G LFW++
Sbjct: 1340 LTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDPRYGILFWTDWDA 1399
Query: 152 KIPLIARAGLDGKKQTILAQEIIMPI--KDITLDL-------------KFFSAFYRNLSK 196
P I A + G + + +++ +T+D +SAFY +
Sbjct: 1400 NFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDARSDAIYSAFYDGTNM 1459
Query: 197 GNI--------HIISLS-------------------------NLSDVSTISMKPYGDSYL 223
I H ++S N+S + S +P+
Sbjct: 1460 IEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPF----- 1514
Query: 224 KDIKIYSKDAQ-TGTNPCGVNN--GGCAELCLYN-GVSAVCACAHGV-VAQDGKSCSEYD 278
D++IY Q NPC N G C+ LCL N SA CAC H + ++ D K+C E
Sbjct: 1515 -DLQIYHPSRQPQAPNPCAANEGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTCYEMK 1573
Query: 279 AFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELS---YDYKRKTLFYSDIQK 335
F++Y+R + I + D+++P+ + + + +I +++ +D + L+++DI+
Sbjct: 1574 KFLLYARRSEIRGV------DIDNPYVNFITAFTVPDIDDVAVIDFDASEERLYWTDIKT 1627
Query: 336 GTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCN--NDATINKIDLDSPKAQR 392
TI F NG+ ++ R S+ GLA ++V LYW + ++ IN LD
Sbjct: 1628 QTITRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDGSLKTS 1687
Query: 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNAL 452
I+ DKP+ + ++YWT+ N +I A G ++ I+ + P L
Sbjct: 1688 II----HGIDKPQCLAAHPVRGKLYWTDGN----TINMANMDGSNSK-ILFQNQKEPVGL 1738
Query: 453 ALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISP--LHPFDMAVYGEFIFWTDWVIH 510
++D+ KL+W + I RC+ DG N V+ + + + + ++W D +
Sbjct: 1739 SIDYVENKLYWISSGNGTINRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLA 1798
Query: 511 AVLRANKYTGEEVYTLRKNIRRPMGIV--AISDNLDACAKTPCRHLNGNCDDICKLDETG 568
+ NK G LR + G+V + D C+ NG C +C
Sbjct: 1799 QLGTCNKRDGRNPSILRN---KTSGVVHMKVYDKEAQQGSNSCQVNNGGCSQLCLPTSET 1855
Query: 569 QVVCSCFTGKVLMEDNRSC 587
C C G L ++ SC
Sbjct: 1856 TRTCMCTVGYYLQKNRMSC 1874
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 171/359 (47%), Gaps = 31/359 (8%)
Query: 247 CAELCLYNGVSAVCACAHG-VVAQDGKSCSE---YDAFIMYS---RVNRIDSIHMTDKSD 299
C+++C C+C G + DG+SC+ ++AFI++S + RID +H D S
Sbjct: 1224 CSQVCEQQKHMVKCSCYEGWALGTDGESCTSVDSFEAFIIFSIRHEIRRID-LHKGDYSL 1282
Query: 300 LNSPFESIRNSTMMKNIIELSYDYKRKTLFYSD-----IQKGTINSVFFNGSNHRVLLER 354
L ++N I L + + + L+++D I +G ++ + V+
Sbjct: 1283 L---------VPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIEVVVEHG 1333
Query: 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS 414
+ EGL +++ +YW D+ +++I++ + G + PR I +D
Sbjct: 1334 LATPEGLTVDWIAGNIYWI---DSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDPRYG 1390
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESIITTDIT--MPNALALDHQAEKLFWGDARLDKIE 472
++WT+W+++ P I+ A SG G ++I T PN L +DH ++ W DAR D I
Sbjct: 1391 ILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDARSDAIY 1450
Query: 473 RCDYDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
YDGTN I + + HPF +++YG ++WTDW + + +ANK+TG+ V ++K
Sbjct: 1451 SAFYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLAKANKWTGQNVSVIQKTS 1510
Query: 531 RRPMGIVAISDNLDACAKTPC--RHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
+P + + A PC G C +C ++ C+C L D ++C
Sbjct: 1511 AQPFDLQIYHPSRQPQAPNPCAANEGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTC 1569
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 184/417 (44%), Gaps = 34/417 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQDG-----KSCSEYDAFIMYSRVNRIDSIHMTDKSDLN 301
C++ C+ + C CA G Q +S S+ + F++ + + I I TD S
Sbjct: 2978 CSQQCINTYGTYKCHCAEGYETQPDNPNGCRSLSDEEPFLILADQHEIRKI-STDGS--- 3033
Query: 302 SPFESIRNSTMMK----NIIELSYDYKRKTLFYSDIQK---GTINSVFFNGSNHRVLLER 354
N T++K N+I L +DY+ + +++ D + IN + NGS+ +V+
Sbjct: 3034 -------NYTLLKQGLNNVIALDFDYREEFIYWIDSSRPNGSRINRMCLNGSDIKVV-HN 3085
Query: 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS 414
LA +++ LYW+ I L+ +V RL PR + +D
Sbjct: 3086 TAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRL---KFPRDLSLDPRAG 3142
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERC 474
+YW + + P I R G +I T I+ P AL +D+ +L+W D + IE
Sbjct: 3143 NLYWIDCCEY-PHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFS 3199
Query: 475 DYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPM 534
+ DG++R + + ++ ++I+WTD ++ R +K +G + +L +
Sbjct: 3200 NMDGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRVHKTSGADRLSLINSWHAIT 3259
Query: 535 GI-VAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVC 593
I V S +K C NG C +C L C+C T L DNR+C N C
Sbjct: 3260 DIQVYHSYRQPDVSKHLCTVNNGGCSHLCLLGPGKTHTCACPTNFYLAADNRTCLSN--C 3317
Query: 594 SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
+ F+C CIPF CD V +C D SDE C C+PG F+C C L +
Sbjct: 3318 TASQFRCKTDKCIPFWWKCDTVDDCGDGSDEPD-DCPEFKCQPGRFQCGTGLCALPA 3373
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 40/222 (18%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+AVDWI +N+YWSD ++ +IEV++L G Y VL+S + P L++DP +G L+W + +
Sbjct: 3092 LAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPRAGNLYWIDCCE 3151
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAF--------YRNLSKGNIHIISL 204
P I R G+DG Q+++ + I +T+D + + N+ + H +
Sbjct: 3152 YPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADENHIEFSNMDGSHRHKVPN 3211
Query: 205 SNLSDVSTISM-------------------KPYGDSYLK---------DIKIYS--KDAQ 234
++ V +++ K G L DI++Y +
Sbjct: 3212 QDIPGVIALTLFEDYIYWTDGKTKSLSRVHKTSGADRLSLINSWHAITDIQVYHSYRQPD 3271
Query: 235 TGTNPCGVNNGGCAELCLYN-GVSAVCACAHGV-VAQDGKSC 274
+ C VNNGGC+ LCL G + CAC +A D ++C
Sbjct: 3272 VSKHLCTVNNGGCSHLCLLGPGKTHTCACPTNFYLAADNRTC 3313
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 64/247 (25%)
Query: 37 LSKISSIAVWPVKGKMFWSN-----VTKQVVTIEMAFMDGTKRETVVSQKK-YPAVTACN 90
+S +I V PV G M+W++ + V IE A+MDG R+ V+ K +P
Sbjct: 644 MSHPRAIVVDPVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLWPN----- 698
Query: 91 LHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG-VDQPSALAVDPESGYLFWSE 149
+ +D+ +YW D + IE L G +R V+ SG ++ P L+ Y+FW++
Sbjct: 699 -GLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVVYSGKELNHPFGLS--HHGNYVFWTD 755
Query: 150 SGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSD 209
Y N G+I + L
Sbjct: 756 -----------------------------------------YMN---GSIFQLDLM---- 767
Query: 210 VSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACA-HGVVA 268
+ +++ + + L ++IY Q G N C +NNGGC LCL VCACA + ++
Sbjct: 768 TNEVTLLRHERAPLFGLQIYDPRKQQGDNMCRINNGGCGTLCLAIPAGRVCACADNQLLD 827
Query: 269 QDGKSCS 275
++G +C+
Sbjct: 828 ENGTTCT 834
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 30/286 (10%)
Query: 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYW 372
+N+I S + +FY I++ +N ++ +A ++V +YW
Sbjct: 3931 QRNVIVWSTQFNPGGIFYK-----MIDAREKRQANSGLICPEFKRPRDIAVDWVAGNVYW 3985
Query: 373 TCNNDA---------------TINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIY 417
T ++ +IN L+ P R++ G+ P I ++ +Y
Sbjct: 3986 TDHSRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGE---PYAIAVNPKRGMMY 4042
Query: 418 WTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD 477
WT H I+ A G ++ ++ P L +DH E+++W D L I YD
Sbjct: 4043 WTVIGDH-SHIEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYD 4101
Query: 478 G--TNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMG 535
G V SK LHP + V+ ++I+ + + R K+ V L + +
Sbjct: 4102 GSSPVVSVSSKQGLLHPHRIDVFEDYIYGAG-PKNGIFRVQKFGHGSVEVLALGVDKTKS 4160
Query: 536 IVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLM 581
I+ PC L+ +CD +C L+ +G C C GK +M
Sbjct: 4161 ILVSHRYKQLNLPNPC--LDLSCDFLCLLNPSG-ATCICPEGKYMM 4203
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 164/417 (39%), Gaps = 66/417 (15%)
Query: 36 TLSKISSIAVWP-------VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTA 88
T+ K WP + ++ W++ I AF DGT ++ +Y +
Sbjct: 1416 TIYKDMKTGAWPNGLTVDHFERRIVWTDARSDA--IYSAFYDGTNMIEIIRGHEYLSHP- 1472
Query: 89 CNLHIAVDWIAQNIYWSDPKENVIEVA-RLTGQYRYVLISGGVDQPSALAV-----DPES 142
AV +YW+D + N + A + TGQ +I QP L + P++
Sbjct: 1473 ----FAVSLYGSEVYWTDWRTNTLAKANKWTGQ-NVSVIQKTSAQPFDLQIYHPSRQPQA 1527
Query: 143 GYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPI---KDITLDLKFFSAFYR------- 192
+ G+ P ++ + A +M + K ++K F + R
Sbjct: 1528 PNPCAANEGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTCYEMKKFLLYARRSEIRGV 1587
Query: 193 NLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCL 252
++ ++ I+ + D+ +++ + S + ++Y D +T T NG E +
Sbjct: 1588 DIDNPYVNFITAFTVPDIDDVAVIDFDAS---EERLYWTDIKTQTITRAFINGTGLETVI 1644
Query: 253 YNGVSAVCACAHGVVAQDGK-SCSEYDAFIMYSRVNRIDS------IHMTDKSDLNSPFE 305
+ ++ A V+++ SE+D + V R+D IH DK
Sbjct: 1645 SRDIQSIRGLAVDWVSRNLYWISSEFDETQI--NVARLDGSLKTSIIHGIDKPQC----- 1697
Query: 306 SIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEY 365
L+ R L+++D TIN +GSN ++L + Q GL+ +Y
Sbjct: 1698 -------------LAAHPVRGKLYWTD--GNTINMANMDGSNSKILFQNQKEPVGLSIDY 1742
Query: 366 VHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
V N LYW + + TIN+ +LD + V+ + + + + D +++W + N
Sbjct: 1743 VENKLYWISSGNGTINRCNLD---GGNLEVIESMKEELTKATALTIMDKKLWWADQN 1796
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 93 IAVDWIAQNIYWSDPKEN---------------VIEVARLTGQYRYVLISGGVDQPSALA 137
IAVDW+A N+YW+D I V +L G L++ +P A+A
Sbjct: 3974 IAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIA 4033
Query: 138 VDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLD 183
V+P+ G ++W+ G I A +DG + +L Q+ + +T+D
Sbjct: 4034 VNPKRGMMYWTVIGDHSHIEEAAMDGTLRRVLVQKNLQRPTGLTVD 4079
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 123/301 (40%), Gaps = 25/301 (8%)
Query: 260 CACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFES-IRNSTMMKNII 317
C C G VA+DG+SC + D +Y ++ + T S S E I S +
Sbjct: 138 CYCEDGFEVAEDGRSCKDQDECSIYGICSQ--TCKNTYGSYACSCVEGYIMQSDNRSCKV 195
Query: 318 ELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGSVEGLAYEYVHNYLYWTCNN 376
+ K L S ++ TI + NGS L + + L + Y + W +
Sbjct: 196 KHEPTDKAPMLLISSLE--TIELFYINGSKMTTLSSANRNEIHTLDFIYSEEMICWIESR 253
Query: 377 DATINKIDLDSPKAQRI----VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAF 432
+++ KA R+ ++ L + D IY+ + S R F
Sbjct: 254 ESSNQLKCGQITKAGRLTDQRIINSLQSFQNVEQMAFDWLTRNIYFVDHVS-----DRIF 308
Query: 433 ---FSGFGTESIITTDITMPNALALDHQAEKLFWGD-ARLDKIERCDYDGTN--RIVLSK 486
F+G ++I +++ P A+A D A KLF+ D + KIERCD DG N RIV SK
Sbjct: 309 VCNFNGSVCVTLIESELHNPKAIAADPIAGKLFFTDYGNVPKIERCDLDGMNRTRIVYSK 368
Query: 487 ISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTL--RKNIRRPMGIVAISDNLD 544
+ + ++W D + V + Y G+ +T+ + ++ GI D L
Sbjct: 369 AEQPSALALDLVNRLVYWVDLYLDYVGVVD-YQGKNRHTIVQGRQVKHLYGITVFEDYLY 427
Query: 545 A 545
A
Sbjct: 428 A 428
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP-GYFK 640
E N++CT T C F C +G CIP CDR +C D++DE + C C P F
Sbjct: 917 ESNQTCTART-CQADQFSCGNGRCIPTAWLCDREDDCGDQTDE-VASCEFPTCEPLTQFI 974
Query: 641 CDNNKCI 647
C + +CI
Sbjct: 975 CKSGRCI 981
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V L G T +L+N + + +IAV P +G M+W+ V IE A MDGT
Sbjct: 4008 INVGQLNGPNCTRLLTNMAGEPY------AIAVNPKRGMMYWT-VIGDHSHIEEAAMDGT 4060
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVI 112
R +V QK T + VD + IYW+D + ++I
Sbjct: 4061 LRRVLV-QKNLQRPTG----LTVDHFGERIYWADFELSII 4095
Score = 39.3 bits (90), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D C I C E F+C + CIP CD +Y+C D SDE CR F C
Sbjct: 3624 DEMDCVIE--CKEDQFQCKNKAYCIPIRWLCDGIYDCVDGSDEETCGRGGSICRDDEFLC 3681
Query: 642 DNNKCIL 648
+N+ C L
Sbjct: 3682 NNSLCKL 3688
Score = 39.3 bits (90), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
C H+F+C + CIP + CD +C D SDE C + C F C N C+ S
Sbjct: 3475 TCGPHEFQCKNNNCIPDHWRCDNQNDCSDNSDED--NCKPQTCTLKDFLCSNGDCVSS 3530
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFK 599
SD D C + C NG C + C + +VCSC G L +DNR+C I C+ H +
Sbjct: 1167 SDEGDLCDE--CSLNNGGCSNHCSVVPGRGIVCSCPEGHQLKKDNRTCEIVDYCASH-LR 1223
Query: 600 CS 601
CS
Sbjct: 1224 CS 1225
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC-------- 634
D C ++T CS +F+C+DG CIP + C++ +C D SDE C DC
Sbjct: 2582 DELDCKVST-CSTVEFRCADGTCIPRSARCNQNMDCSDASDEK--GCNNTDCTHFYKLGV 2638
Query: 635 -RPGYFKCDNNK-CILSS 650
G+ +C++ C+L S
Sbjct: 2639 KSTGFIRCNSTSLCVLPS 2656
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 582 EDNRSCTINTVCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED + C N+ CS F+C + CI CD +C D SDE C + C P F+
Sbjct: 3426 EDEKDCPENS-CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA--NCDKKTCGPHEFQ 3482
Query: 641 CDNNKCI 647
C NN CI
Sbjct: 3483 CKNNNCI 3489
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 593 CSEHDFKCSDGMCIPFN-QTCDRVYNCHDKSDEGIL----YCAMRDCRPGYFKCDNNKCI 647
C +F+C+DG C+ CD ++C D SDE + A C +F C N +CI
Sbjct: 2845 CGPEEFRCADGRCLVNTLWQCDGDFDCPDSSDEAPINPRCRSAEHSCNSSFFMCKNGRCI 2904
Query: 648 LS 649
S
Sbjct: 2905 PS 2906
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 592 VCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
VC FKC+ + CIP N C+ +C D+ DE C C P YF+C K +S
Sbjct: 3395 VCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDEKD--CPENSCSPDYFQCKTTKHCIS 3451
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCR 635
C + F+CS G CIP + CD +C D SDE + C + R
Sbjct: 1006 CLDDQFRCSSGRCIPGHWACDGDNDCGDFSDETHINCTKEEAR 1048
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +C T C+ DF CS+G C+ CD ++C D SDE C F+C
Sbjct: 3506 DEDNCKPQT-CTLKDFLCSNGDCVSSRFWCDGEFDCADGSDEKN---CETSCSKDQFQCS 3561
Query: 643 NNKCI 647
N +C+
Sbjct: 3562 NGQCL 3566
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 586 SCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNK 645
C N C E+ F C + +CIP Q + + L C R C P F+C + +
Sbjct: 2798 GCAPNNTCDENAFMCHNKVCIP-KQFVCDHDDDCGDGSDEFLQCGYRQCGPEEFRCADGR 2856
Query: 646 CILSS 650
C++++
Sbjct: 2857 CLVNT 2861
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 296/616 (48%), Gaps = 72/616 (11%)
Query: 93 IAVDWIAQNIYWSDP--KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES 150
+A+DW A N+Y+++ E +IEV R+ YR VL+ VD P + VDP+ YLFW++
Sbjct: 2151 VALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPKHRYLFWADY 2210
Query: 151 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLS----- 205
G+ P I R+ LD +T+L E I+ + + +D ++ + S I I L
Sbjct: 2211 GQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARIHLDGGESQ 2270
Query: 206 --------------------------NLSDVSTISMKPYGD----------SYLKDIKIY 229
NL V S +P + L+D+ I+
Sbjct: 2271 VVRYGSRYPTPYGITVFGESIIWVDRNLKKVFQASKQPGNTDPPVVIRDKINLLRDVTIF 2330
Query: 230 SKDAQT------GTNPCGVNNGGCAELC--LYNGVSAVCACAHGVVAQDGKSCS-EYDAF 280
+ AQ NPC +NGGC+ C L + C CA G + DGKSC+ + F
Sbjct: 2331 DEHAQPLSPAELNNNPCLQSNGGCSHFCFALPELPTPRCGCAFGTLGNDGKSCATSQEDF 2390
Query: 281 IMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYS---DIQKGT 337
++YS N + S+H D D + PF+ I ++ I L YD + +F++ + +G
Sbjct: 2391 LIYSLNNSLRSLHF-DPRDHSLPFQVI---SVAGTAIALDYDRRNNRIFFTQKLNSLRGQ 2446
Query: 338 IN--SVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVV 395
I+ S++ S+ VLL G +G+A+++++ +Y++ ++ TIN + D + R V+
Sbjct: 2447 ISYVSLYSGSSSPTVLLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDG--SNRAVI 2504
Query: 396 VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALD 455
R+ KPR I +D C +YWT+W ++ I+RA G I+ T + PN LALD
Sbjct: 2505 ARVS---KPRAIVLDPCRGYMYWTDWGTNA-KIERATLGGNFRVPIVNTSLVWPNGLALD 2560
Query: 456 HQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRA 515
+ + L+W DA L KIER GTNR V+ + H F + VYG++I+WTD + RA
Sbjct: 2561 LETDLLYWADASLQKIERSTLTGTNREVVVSTA-FHSFGLTVYGQYIYWTDLYTRKIYRA 2619
Query: 516 NKYTGEEVYTLRKNI-RRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETG-QVVCS 573
NKY G ++ + + +P GI + PC NG C IC G + C
Sbjct: 2620 NKYDGSDLVAMTTRLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCP 2679
Query: 574 CFTGKVLMEDNRSCTIN--TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAM 631
L DN+ C ++ T C++ F C +G CI + CD +C D SDE CA
Sbjct: 2680 HEGNWYLANDNKYCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDCGDGSDELPTVCAF 2739
Query: 632 RDCRPGYFKCDNNKCI 647
CR F C N +C+
Sbjct: 2740 HTCRSTAFTCGNGRCV 2755
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 269/616 (43%), Gaps = 78/616 (12%)
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
++AVDWI +Y + K N I+V L G R LI+ + P +A+DP GYLF+S+ G
Sbjct: 470 NLAVDWINNKLYLVETKVNRIDVVNLEGNQRVTLITENLGHPRGIALDPTVGYLFFSDWG 529
Query: 152 KI---PLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLS 208
+ P + RA +DG + L + ITLDL ++ + I ++ +
Sbjct: 530 SLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQ 589
Query: 209 DVS-----TISMKPYGDSYLKD-----------------------------------IKI 228
+ ++ P+G S ++ + +
Sbjct: 590 RKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKASKFTETNPQVYHQSSLRPHGVTV 649
Query: 229 YSKDAQ-TGTNPCGVNNGGCAELCLYN------GVSAVCACAHGV-VAQDGKSCSEYDAF 280
Y Q TNPCG NNGGCA++C+ + G+ C C G + D C F
Sbjct: 650 YHALRQPNATNPCGSNNGGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAVKNF 709
Query: 281 IMYSRVNRIDSIHMT--DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI 338
+++S + I T + D+ P + + + +D + T+FYSD+ K I
Sbjct: 710 LLFSSKTAVRGIPFTLSTQEDVMVPV-----TGSPSFFVGIDFDAQHSTVFYSDLSKDII 764
Query: 339 NSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVR 397
+G+ V+ R SVE L ++++ LYWT ++ + L + K++R ++
Sbjct: 765 YKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGGLKSVTVLRL-ADKSRRQIISN 823
Query: 398 LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQ 457
L + PR I + ++ ++W I RA+ G I+ T + PN LA+D
Sbjct: 824 L---NNPRSIVVHPTAGYMFLSDW-FRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWS 879
Query: 458 AEKLFWGDARLDKIERCDYDGTNRIVLSKISPL-HPFDMAVYGEFIFWTDWVIHAVLRAN 516
A +L+W DA DKIE DG +R L + + HPF + V+ + +F TDW + A++R
Sbjct: 880 ASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQMTHPFGLTVFKDNVFITDWRLGAIIRVR 939
Query: 517 KYTGEEVYTLRKNIRRPMGIVAISDNLDA----CAKTPCRHLNGNCDDICKLDETGQVVC 572
K G ++ +R+ I M + A +L C++T H NG+C C Q VC
Sbjct: 940 KSDGGDMTVIRRGISSVMHVKAYDADLQTGSNYCSQT--THANGDCSHFCFPVPNFQRVC 997
Query: 573 SCFTGKVLMEDNRSCTINTV-------CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEG 625
C G L D +C + C F C++G C+P CD V +CHD SDE
Sbjct: 998 GCPYGMKLQRDQMTCEGDPAREPPTQQCGSLSFPCNNGKCVPSFFRCDGVDDCHDNSDEH 1057
Query: 626 ILYCAMRDCRPGYFKC 641
C P F C
Sbjct: 1058 QCGVFNNTCSPSAFAC 1073
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 187/419 (44%), Gaps = 35/419 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQ-DGKSC---SEYDAFIMYSRVNRIDSIHMTDKSDLNS 302
C++ C S +C CA G + + DGKSC S + ++++S I ++ TD S +
Sbjct: 3165 CSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFSNRYYIRNL-TTDGSSYSL 3223
Query: 303 PFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGL 361
+ + N++ L +D K L++ D +K I +F N +N ++ R E L
Sbjct: 3224 ILQG------LGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNRETIINHRLRRAESL 3277
Query: 362 AYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQH----------DKPRGIDIDS 411
A ++V LYW DA ++ + + + + ++ QH + PRGI +
Sbjct: 3278 AVDWVSRKLYWL---DAILDCLFVSDLEGRHRKMI--AQHCVDANNTFCFEHPRGIVLHP 3332
Query: 412 CDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKI 471
+YW +W H I R G II+T I PNA+ +D+ + L+W DA L I
Sbjct: 3333 QRGHVYWADWGVHA-YIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3391
Query: 472 ERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIR 531
E D +G +R + S HPF + ++ + +FWTDW V + NKY G L
Sbjct: 3392 EFSDLEGHHRHTVYDGSLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTH 3451
Query: 532 RPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQ-VVCSCFTG--KVLMEDNRSCT 588
+P I PC NG C +C + G+ C+C V + D C
Sbjct: 3452 KPFDIHVYHPYRQPIMSNPCGTNNGGCSHLCLIKAGGRGFTCACPDDFQTVQLRDRTLCM 3511
Query: 589 INTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
+CS F C + CIP CD +C D SDE L C R CR G F+C + C
Sbjct: 3512 --PMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDL-CPHRFCRLGQFQCRDGNC 3567
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/603 (25%), Positives = 254/603 (42%), Gaps = 81/603 (13%)
Query: 48 VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP 107
V G++FWS++ + F +GT + V + + + IAVDWI +N+YW+D
Sbjct: 1477 VTGRVFWSDLLQG--KTWSVFQNGTDKRVV-----HDSGLSVTEMIAVDWIGRNLYWTDY 1529
Query: 108 KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG--YLFWSESGKIPLIARAGLDGKK 165
IEV+++ G +R VLIS V +P LA+DP G +FWS+ G P I RA +DG
Sbjct: 1530 ALETIEVSKIDGSHRTVLISKNVTKPRGLALDPRMGDNVMFWSDWGHHPRIERASMDGTM 1589
Query: 166 QTILAQEIIMPIKDITLD-----------------------------------------L 184
+T++ QE I +++D L
Sbjct: 1590 RTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHAL 1649
Query: 185 KFFSAFYRNLSKGNIHIISLS-----NLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNP 239
F F +G ++ + N S V +P G + I+ NP
Sbjct: 1650 TLFEDFVYWTDRGTRQVMQANKWHGGNQSVVMYSVHQPLGIT-----AIHPSRQPPSRNP 1704
Query: 240 CGVNNGGCAELCLYNGVSA---VCACAHGV-VAQDGKSCSEYD-AFIMYSRVNRIDSIHM 294
C + C+ LCL + + CAC G ++ D +C D F+M R N I I +
Sbjct: 1705 CA--SASCSHLCLLSAQAPRHYSCACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISL 1762
Query: 295 TDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER 354
+ N I + +++ ++ +D + +++ + G I+ V +GSN V
Sbjct: 1763 DPEVKSNDAMVPI---SGIQHGYDVEFDDSEQFIYWVE-NPGEIHRVKTDGSNRTVFAPL 1818
Query: 355 QGSVEGLAY--EYVHNYLYWTCNNDATINKIDLDS-PKAQRIVVVRLGQH---DKPRGID 408
L ++V +Y+T +I + L + + ++ G P GI
Sbjct: 1819 SLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGDTRYGKTLIANDGTPLGVGFPVGIA 1878
Query: 409 IDSCDSRIYWTNW--NSHLPS-IQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGD 465
+D ++YW++ +S +P+ I A G + + T ++ + LD Q +KL+W
Sbjct: 1879 VDPARGKLYWSDHGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAV 1938
Query: 466 ARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYT 525
IER + DGT R++L HP+ + VYG F++++D + R +K +G
Sbjct: 1939 TSRGVIERGNVDGTERMILVH-HLAHPWGLVVYGSFLYYSDEQYEVIERVDKSSGNNKVV 1997
Query: 526 LRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNR 585
LR N+ G+ A + C + C IC G C+C +G L D R
Sbjct: 1998 LRDNVPYLRGLRVYHRRNAADSSNGCSNNPNACQQICLPVPGGMFSCACASGFKLSPDGR 2057
Query: 586 SCT 588
SC+
Sbjct: 2058 SCS 2060
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 248/582 (42%), Gaps = 100/582 (17%)
Query: 96 DWIAQNIYWSDPKENVIEVARLTGQYRY--VLISG-----GVDQPSALAVDPESGYLFWS 148
DW+++NIY++ P IEV L G RY LI+ GV P +AVDP G L+WS
Sbjct: 1830 DWVSRNIYYTTPASRSIEVLTLKGDTRYGKTLIANDGTPLGVGFPVGIAVDPARGKLYWS 1889
Query: 149 ESGK---IPL-IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIH---- 200
+ G +P IA A +DG IL + ++ +TLD++ ++ S+G I
Sbjct: 1890 DHGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRGVIERGNV 1949
Query: 201 -----IISLSNLSD----VSTISMKPYGDS------------------------YLKDIK 227
+I + +L+ V S Y D YL+ ++
Sbjct: 1950 DGTERMILVHHLAHPWGLVVYGSFLYYSDEQYEVIERVDKSSGNNKVVLRDNVPYLRGLR 2009
Query: 228 IY-SKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYS 284
+Y ++A +N C N C ++CL G CACA G ++ DG+SCS Y++F++ S
Sbjct: 2010 VYHRRNAADSSNGCSNNPNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYNSFMVVS 2069
Query: 285 RVNRID--SIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT----- 337
+ + S+ ++D S+ P + +N++ D +++ D
Sbjct: 2070 MLPAVRGFSLELSDHSEAMVPV-----AGQGRNVLHADVDVANGFIYWCDFSSSVRSSNG 2124
Query: 338 INSVFFNGSNHRVLLE---RQGSVEGLAYEYVHNYLYWTCN--NDATINKIDLDSPKAQR 392
I + +GSN ++ + G+A ++ LY+T + I + +++ +
Sbjct: 2125 IRRIKPDGSNFTNVVTYGIGANGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRV 2184
Query: 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNAL 452
++ V + D PR I +D ++W ++ P I+R+F +++ I P L
Sbjct: 2185 LLKVSV---DMPRHIIVDPKHRYLFWADYGQK-PKIERSFLDCTNRTVLVSEGIVTPRGL 2240
Query: 453 ALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLH-PFDMAVYGEFIFWTDWVIHA 511
A+DH ++W D LD I R DG V+ S P+ + V+GE I W D +
Sbjct: 2241 AMDHDTGYIYWVDDSLDLIARIHLDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLKK 2300
Query: 512 VLRANKYTG--EEVYTLRKNIR------------RPMGIVAISDNLDACAKTPCRHLNGN 557
V +A+K G + +R I +P+ +++N PC NG
Sbjct: 2301 VFQASKQPGNTDPPVVIRDKINLLRDVTIFDEHAQPLSPAELNNN-------PCLQSNGG 2353
Query: 558 CDDIC-KLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDF 598
C C L E C C G L D +SC S+ DF
Sbjct: 2354 CSHFCFALPELPTPRCGCAFG-TLGNDGKSCAT----SQEDF 2390
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 174/355 (49%), Gaps = 24/355 (6%)
Query: 245 GGCAELCLYNGVSAVCAC-AHGVVAQDGKSC----SEYDAFIMYSRVNRIDSIHMTDKSD 299
G C++ C+ S CAC + DG++C SE ++ SR I +
Sbjct: 1399 GFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTGSENPLLVVASRDKIIVDNITAHTHN 1458
Query: 300 LNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSV- 358
L S + + ++ L +D +F+SD+ +G SVF NG++ RV+ + SV
Sbjct: 1459 LYSLVQDV------SFVVALDFDSVTGRVFWSDLLQGKTWSVFQNGTDKRVVHDSGLSVT 1512
Query: 359 EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDS--CDSRI 416
E +A +++ LYWT D + I++ V+ KPRG+ +D D+ +
Sbjct: 1513 EMIAVDWIGRNLYWT---DYALETIEVSKIDGSHRTVLISKNVTKPRGLALDPRMGDNVM 1569
Query: 417 YWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDY 476
+W++W H P I+RA G I+ I P L++D+ +++ DA LD IE CDY
Sbjct: 1570 FWSDWGHH-PRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDY 1628
Query: 477 DGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPM 534
DG NR ++ S + HP + ++ +F++WTD V++ANK+ G + ++ +P+
Sbjct: 1629 DGHNRRQVIASDLVLHHPHALTLFEDFVYWTDRGTRQVMQANKWHGGNQSVVMYSVHQPL 1688
Query: 535 GIVAISDNLDACAKTPCRHLNGNCDDICKLDETG--QVVCSCFTGKVLMEDNRSC 587
GI AI + ++ PC + +C +C L C+C +G L +D+ +C
Sbjct: 1689 GITAIHPSRQPPSRNPC--ASASCSHLCLLSAQAPRHYSCACPSGWNLSDDSVNC 1741
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 16/354 (4%)
Query: 245 GGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRV-NRIDSIHMTDKSDLNSP 303
G C + C C C G + + G+ C D+F S + + + + D N
Sbjct: 355 GICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAASVIFSNGRDLLVGDLHGRN-- 412
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLA 362
F + S ++ + + Y++ +F++D + + S NG N + +L + E LA
Sbjct: 413 FRILAESKNRGMVMGVDFHYQKHRVFWTDPMQEKVFSTDINGLNTQEILNVSVDTPENLA 472
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
++++N LY + +N+ID+ + + + V + PRGI +D +++++W
Sbjct: 473 VDWINNKLYLV---ETKVNRIDVVNLEGNQRVTLITENLGHPRGIALDPTVGYLFFSDWG 529
Query: 423 S--HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
S P ++RAF G + ++TT + P + LD +++++W D+R D IE YDG
Sbjct: 530 SLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQ 589
Query: 481 RIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVA 538
R +++ L HPF ++++ E +F+TDW AV++A+K+T ++ RP G+
Sbjct: 590 RKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKASKFTETNPQVYHQSSLRPHGVTV 649
Query: 539 ISDNLDACAKTPCRHLNGNCDDICKL----DETG-QVVCSCFTGKVLMEDNRSC 587
A PC NG C +C L D G C C G L +D C
Sbjct: 650 YHALRQPNATNPCGSNNGGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRC 703
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+AVDW+ ++IYWSD K IEVA L G+YR LI+ +DQP+A+AV+P+ G +FW++ GK
Sbjct: 4149 LAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTDQGK 4208
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVST 212
P I A ++G+ +++L E + +++D Y + SK ++ + +D
Sbjct: 4209 QPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRL 4268
Query: 213 I---SMKPYGDSYLKDIKIY 229
I +MKP+ +D K+Y
Sbjct: 4269 IINEAMKPFSLDIFED-KLY 4287
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 68/270 (25%)
Query: 48 VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP 107
V+ +++W + KQ+ IE F++ T RET+++ + A + +AVDW+++ +YW D
Sbjct: 3239 VEKRLYWIDAEKQI--IERMFLNKTNRETIINHRLRRAES-----LAVDWVSRKLYWLDA 3291
Query: 108 KENVIEVARLTGQYRYVLISGGVD--------QPSALAVDPESGYLFWSESGKIPLIARA 159
+ + V+ L G++R ++ VD P + + P+ G+++W++ G I R
Sbjct: 3292 ILDCLFVSDLEGRHRKMIAQHCVDANNTFCFEHPRGIVLHPQRGHVYWADWGVHAYIGRI 3351
Query: 160 GLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNI-------------------H 200
G+DG ++++ I IT+D ++ + G I H
Sbjct: 3352 GMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDGSLPH 3411
Query: 201 IISLSNLSD-------------------------VSTISMKPYGDSYLKDIKIYSKDAQT 235
+L+ D + + KP+ DI +Y Q
Sbjct: 3412 PFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPF------DIHVYHPYRQP 3465
Query: 236 -GTNPCGVNNGGCAELCLY--NGVSAVCAC 262
+NPCG NNGGC+ LCL G CAC
Sbjct: 3466 IMSNPCGTNNGGCSHLCLIKAGGRGFTCAC 3495
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 342 FFNGSNHRVL-----LERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
F +GSN+ + L+ +GLA ++V ++YW+ I LD + ++
Sbjct: 4125 FESGSNNPIREVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITT 4184
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
+L D+P I ++ ++WT+ P I+ A+ +G +++ ++ PN L++D+
Sbjct: 4185 QL---DQPAAIAVNPKLGLMFWTDQGKQ-PKIESAWMNGEHRSVLVSENLGWPNGLSIDY 4240
Query: 457 -QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRA 515
++++W D++ D IE YDGT+R ++ + + PF + ++ + ++W V R
Sbjct: 4241 LNDDRVYWSDSKEDVIEAIKYDGTDRRLIINEA-MKPFSLDIFEDKLYWVAKEKGEVWRQ 4299
Query: 516 NKYTGE 521
NK+ E
Sbjct: 4300 NKFGKE 4305
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVV 62
I S +I V L+G Y+ ++ T+ L + ++IAV P G MFW++ KQ
Sbjct: 4158 IYWSDAKSQRIEVATLDGRYRKWLI------TTQLDQPAAIAVNPKLGLMFWTDQGKQ-P 4210
Query: 63 TIEMAFMDGTKRETVVSQK-KYPAVTACNLHIAVDWIAQN-IYWSDPKENVIEVARLTGQ 120
IE A+M+G R +VS+ +P +++D++ + +YWSD KE+VIE + G
Sbjct: 4211 KIESAWMNGEHRSVLVSENLGWPN------GLSIDYLNDDRVYWSDSKEDVIEAIKYDGT 4264
Query: 121 YRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIK 178
R ++I+ + +P +L + + Y E G++ + G + K++ ++ + ++
Sbjct: 4265 DRRLIINEAM-KPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKEKVLVVNPWLTQVR 4321
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
CSE +F+C+D CIP CD+ +C D SDE C M+ C P +F+C + C+
Sbjct: 3761 CSESEFRCADQQCIPSRWVCDQENDCGDNSDE--RDCEMKTCHPEHFQCTSGHCV 3813
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 581 MEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
+++ ++CT+ T CS +F C++G C+ + CDR +C D SDE C+ C F
Sbjct: 2984 LDELQNCTMRT-CSAGEFSCANGRCVRQSFRCDRRNDCGDYSDE--RGCSYPPCHANQFT 3040
Query: 641 CDNNKCI 647
C N +CI
Sbjct: 3041 CQNGRCI 3047
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 570 VVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
VC+ F D + C DF+C++ CIP CD +C D SDE C
Sbjct: 3699 AVCNGFDDCRDNSDEQGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDE--ENC 3756
Query: 630 AMRDCRPGYFKCDNNKCILS 649
R+C F+C + +CI S
Sbjct: 3757 VPRECSESEFRCADQQCIPS 3776
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 26/59 (44%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D C S +F CS+G CIP + C+ + NCHD C C P + KC
Sbjct: 2772 DEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDNDTSDEKNCPPHTCPPDFTKC 2830
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 423 SHLPSIQRAFFSGFGTES---IITTDITM-----PNALALDHQAEKLFWGDARLDKIERC 474
S +I+RA+ F + S I D+ + P+ LA+D ++W DA+ +IE
Sbjct: 4112 SQFGAIKRAYIPNFESGSNNPIREVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVA 4171
Query: 475 DYDGTNRIVLSKISPLHPFDMAVYGE--FIFWTDWVIHAVLRANKYTGEEVYTL-RKNIR 531
DG R L P +AV + +FWTD + + GE L +N+
Sbjct: 4172 TLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVLVSENLG 4231
Query: 532 RPMGI 536
P G+
Sbjct: 4232 WPNGL 4236
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD-NNKCILSS 650
C +F+C +G CIP + CD +C D +DE + C R C G F C CI SS
Sbjct: 28 CGSGNFRCDNGYCIPASWRCDGTRDCLDDTDE--IGCPPRSCESGLFLCPAEGTCIPSS 84
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPG 637
D R C + T EH F+C+ G C+P CD +C D SDE C R C
Sbjct: 3791 DERDCEMKTCHPEH-FQCTSGHCVPKALACDGRADCLDASDESA--CPTRFPNGTYCPAA 3847
Query: 638 YFKCDNNKCILS 649
F+C N+ CI S
Sbjct: 3848 MFECKNHVCIQS 3859
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD--CRPGYFK 640
D R C+ C + F C +G CIP CD +C D SDE C + C F+
Sbjct: 3025 DERGCSY-PPCHANQFTCQNGRCIPRFFVCDEDNDCGDGSDEQEHLCHTPEPTCPLHQFR 3083
Query: 641 CDNNKCI 647
CDN CI
Sbjct: 3084 CDNGHCI 3090
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +CT T+CS+ +F+C G CI CD +C D SDE C C F C
Sbjct: 175 DEANCT--TLCSQKEFECGSGECILRAYVCDHDNDCEDNSDE--RNCNYDTCGGHQFTCS 230
Query: 643 NNKCI 647
N +CI
Sbjct: 231 NGQCI 235
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 592 VCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
+C +F+C DG CIP CD +C SDE C + C P +F CDN CI +
Sbjct: 1230 MCHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHT-GCVPKTCSPTHFLCDNGNCIYKA 1288
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 583 DNRSCTINTVCSEHDFKCSDGM-CIPFNQTCDRVYNCHDKSDEGILYCAMRD---CRPGY 638
D C +N C+ FKC+DG CI CD VY+C D SDE C R C P
Sbjct: 1180 DEAGCVLN--CTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEA--GCPTRPPGMCHPDE 1235
Query: 639 FKC 641
F+C
Sbjct: 1236 FQC 1238
Score = 39.3 bits (90), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
++ C F C + +CIP + CD +C D SDE A C+P F+C +++CI
Sbjct: 1107 SSTCPSTSFTCDNHVCIPKDWVCDTDNDCSDGSDEKNCQ-ASGTCQPTQFRCPDHRCI 1163
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 566 ETGQVVC----SCFTGKVLMEDNRSCT---------INTVCSEHDFKCSDGMCIPFNQTC 612
E+G +C +C + ++++ C+ T CS CS+G CIP C
Sbjct: 68 ESGLFLCPAEGTCIPSSWVCDEDKDCSDGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRC 127
Query: 613 DRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
D V +C D SDE R+C Y CD C
Sbjct: 128 DHVSDCPDGSDE-------RNCH--YPTCDQLTC 152
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCR-PGYFKCDNNKCI 647
T C F+C + +CI CD +C D SDE I C C P F+CDN++C+
Sbjct: 3842 TYCPAAMFECKNHVCIQSFWICDGENDCVDGSDEEIHLCFNIPCESPQRFRCDNSRCV 3899
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 577 GKVLMEDNRSCTINTVCSEHDFKCSDGM-----CIPFNQTCDRVYNCHDKSDEGILYCAM 631
G + ED R CS F C + CIP CD +C D DE + C M
Sbjct: 2934 GDMSDEDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDE-LQNCTM 2992
Query: 632 RDCRPGYFKCDNNKCILSS 650
R C G F C N +C+ S
Sbjct: 2993 RTCSAGEFSCANGRCVRQS 3011
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
ED C T C FKC++G CIP + CD +C D SDE I +C + C
Sbjct: 3627 EDTSHCASRT-CRPGQFKCNNGRCIPQSWKCDVDNDCGDYSDEPI-----DECTTAAYNC 3680
Query: 642 DNN 644
DN+
Sbjct: 3681 DNH 3683
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 583 DNRSCTINTVCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D ++C +T C KC + +C+P CD +C D SDE +YCA CR F+C
Sbjct: 2814 DEKNCPPHT-CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQC 2872
Query: 642 -DNNKCILS 649
+CI S
Sbjct: 2873 LSPQRCIPS 2881
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
D R+C +T C H F CS+G CI N CD +C D DE
Sbjct: 213 DERNCNYDT-CGGHQFTCSNGQCINQNWVCDGDDDCQDSGDE 253
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 588 TINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYF-KCDNN 644
T C H F+C +G CI + C+ V +C D SDE C + +C +CD+N
Sbjct: 3072 TPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCSDNSDEK--GCGINECLDSSISRCDHN 3127
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 588 TINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGIL-YCAMRDCRPGYFKCDNNK 645
++NT C F+C +G CI N CD +C D SDE +C +++C F C N++
Sbjct: 2904 SVNT-CRASQFQCDNGRCISGNWVCDGDNDCGDMSDEDQRHHCELQNCSSTQFTCVNSR 2961
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 592 VCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKCDNNKCI 647
C ++F+C S CIP CD +C D SDE ++ CR F+CDN +CI
Sbjct: 2864 TCRSNEFQCLSPQRCIPSYWFCDGEADCADGSDEPDTCGHSVNTCRASQFQCDNGRCI 2921
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC- 641
D ++C + C F+C D CI CD +C D SDE C + +C FKC
Sbjct: 1140 DEKNCQASGTCQPTQFRCPDHRCISPLYVCDGDKDCADGSDEA--GCVL-NCTSAQFKCA 1196
Query: 642 DNNKCILSSH 651
D + CI S +
Sbjct: 1197 DGSSCINSRY 1206
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 594 SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC---AMRDCRPGYFKCDNNKCI 647
S F+C + C+ +Q C+ V +C D SDE +C + C +KC N CI
Sbjct: 3887 SPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKPCTDTEYKCSNGNCI 3943
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
C++ ++KCS+G CI + CD V +C D SDE
Sbjct: 3930 CTDTEYKCSNGNCISQHYVCDNVNDCGDLSDE 3961
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 304/652 (46%), Gaps = 80/652 (12%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVS-QKKYPAVTACNLHIAVDWIAQNIYWSDPKE 109
+++W++++ + TI AFM+G+ E VV YP +AVDW+ +N+YW+D
Sbjct: 675 RIYWTDIS--LKTISRAFMNGSALEHVVEFGLDYPE------GMAVDWLGKNLYWADTGT 726
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
N IEV++L GQ+R VL+ +D P ALA+DP G+++W+E G P I RA +DG ++T L
Sbjct: 727 NRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 786
Query: 170 AQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVS----------TISMKPYG 219
+ +T+D ++ +L + ++I SN+ ++ + Y
Sbjct: 787 VPNVGR-ANGLTIDYAKRRLYWTDL---DTNLIESSNMLGLNREVIADDLPHPFGLTQYQ 842
Query: 220 D------------------------------SYLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
D Y+ DI ++ Q+G N C +NG C+
Sbjct: 843 DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSH 902
Query: 250 LCLYNGVSA-VCAC-AHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKS--DLNSPFE 305
LCL V VC C AH + D ++CS F+++S+ + I+ + + ++ D+ P
Sbjct: 903 LCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIH 962
Query: 306 SIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGL---- 361
S+RN + + YD K L++ D ++ I +GS ++ + L
Sbjct: 963 SLRN------VRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQP 1016
Query: 362 ---AYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYW 418
+ + Y+YWTC IN LD + + VV G+ D+PR + ++ +Y+
Sbjct: 1017 YDLSIDIYSRYIYWTCEATNVINVTRLD---GRSVGVVLKGEQDRPRAVVVNPEKGYMYF 1073
Query: 419 TNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDG 478
TN P I+RA G E + + ++ P ALALD + KLFW D+ L +IE D G
Sbjct: 1074 TNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG 1133
Query: 479 TNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVA 538
NRIVL + L P + V+ +++W D + + + E ++ I + I A
Sbjct: 1134 ANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHA 1193
Query: 539 ISD-NLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHD 597
+ + NL + PC NG C IC + G CSC VL++D SC CS
Sbjct: 1194 VKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPPTCSPQQ 1253
Query: 598 FKCSDGM--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
F C G CIP CD C D SDE L C + C F+C + +CI
Sbjct: 1254 FTCFTGEIDCIPVAWRCDGFTECEDHSDE--LNCPV--CSESQFQCASGQCI 1301
Score = 252 bits (644), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 278/586 (47%), Gaps = 60/586 (10%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+G ++W++ +V I +F+DG+ + VV+ A A IAVDW+A+N+YW+D
Sbjct: 369 PVEGYIYWTD--DEVRAIRRSFIDGSGSQFVVT-----AQIAHPDGIAVDWVARNLYWTD 421
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ IEV RL G R +LIS +++P A+ +DP GY++W++ G+IP I RA LDG +
Sbjct: 422 TGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR 481
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMK-P--YGDSYL 223
+L + + LD ++ + I +++ + K P +G + L
Sbjct: 482 VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLL 541
Query: 224 KDI------------KIYSKDAQ----------------------TGTNPCGVNNGGCAE 249
D +++ + A+ G+NPC NGGC+
Sbjct: 542 GDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMGLKATNVHRVIGSNPCAEENGGCSH 601
Query: 250 LCLYNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHM-TDKSDLNSPFESI 307
LCLY CAC G + D K+C +AF+++SR I I + T+ +++ P +
Sbjct: 602 LCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGV 661
Query: 308 RNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGSVEGLAYEYV 366
+ ++ L +D ++++DI TI+ F NGS ++E EG+A +++
Sbjct: 662 KEASA------LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL 715
Query: 367 HNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLP 426
LYW D N+I++ Q V+ D PR + +D + +YWT W P
Sbjct: 716 GKNLYWA---DTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK-P 771
Query: 427 SIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSK 486
I RA G + + ++ N L +D+ +L+W D + IE + G NR V++
Sbjct: 772 KIDRAAMDG-SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD 830
Query: 487 ISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDAC 546
P HPF + Y ++I+WTDW ++ RANK +G+ ++ ++ M I+ + +
Sbjct: 831 DLP-HPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQS- 888
Query: 547 AKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTV 592
C NG+C +C G VC C L DNR+C+ T
Sbjct: 889 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTT 934
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/586 (28%), Positives = 285/586 (48%), Gaps = 65/586 (11%)
Query: 50 GKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKE 109
G ++WS+V+++ + + + VVS P AC DW+ + +YW+D +
Sbjct: 63 GLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC------DWLGEKLYWTDSET 116
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
N IEV+ L G R VL +DQP A+A+DP SG+++W++ G++P I RAG+DG + I+
Sbjct: 117 NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 176
Query: 170 AQEIIMPIKDITLD-----LKFFSAFYRNLSKGNI--------------HIISLSNLSDV 210
I +TLD L + A + K N+ H +L+ D+
Sbjct: 177 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDI 236
Query: 211 ---------STISMKPYGDSYLK----------DIKIYSKDAQ-TGTNPCGVNNGGCAEL 250
S ++ Y L+ DI +S+ Q TNPCG++NGGC+ L
Sbjct: 237 LYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHL 296
Query: 251 CLYNGVSAV--CACAHGV-VAQDGKSCSE--YDAFIMYSRVN-RIDSIHMTDKSDLNSPF 304
CL + V CAC GV + ++GK+C + + ++ R + R S+ D +D+
Sbjct: 297 CLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQL 356
Query: 305 ESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLAY 363
E IR++ I + YD ++++D + I F +GS + ++ Q +G+A
Sbjct: 357 EDIRHA------IAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAV 410
Query: 364 EYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNS 423
++V LYWT D ++I++ ++ ++PR I +D +YWT+W
Sbjct: 411 DWVARNLYWT---DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWG- 466
Query: 424 HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIV 483
+P I+RA G ++ T + PN LALD+ K++WGDA+ DKIE + DGT R V
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRV 526
Query: 484 LSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNL 543
L + H F + G++++WTDW ++ R +K + E + + + MG+ A + +
Sbjct: 527 LVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQ-LPDLMGLKATNVH- 584
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTI 589
PC NG C +C G + C+C G L+ D ++C +
Sbjct: 585 RVIGSNPCAEENGGCSHLCLYRPQG-LRCACPIGFELISDMKTCIV 629
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 7/278 (2%)
Query: 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN--HRVLLERQGSVEGLAYEYVHNYL 370
+++ + + + +++SD+ + I FN + V++ S +GLA +++ L
Sbjct: 50 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKL 109
Query: 371 YWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQR 430
YWT D+ N+I++ + V+ + D+PR I +D +YWT+W +P I+R
Sbjct: 110 YWT---DSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIER 165
Query: 431 AFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPL 490
A G II ++I PN L LD++ +KL+W DA+L+ I + + DGTNR + K S
Sbjct: 166 AGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP 225
Query: 491 HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTP 550
HPF + ++ + ++WTDW H++L NKYTGE + + +I PM I A S A P
Sbjct: 226 HPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNP 285
Query: 551 CRHLNGNCDDICKLDETGQVV-CSCFTGKVLMEDNRSC 587
C NG C +C + C+C TG L+E+ ++C
Sbjct: 286 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTC 323
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 60/266 (22%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V L+G +L E + + ++ V P KG M+++N+ ++ IE A +DGT
Sbjct: 1038 INVTRLDGRSVGVVLKGEQD------RPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT 1091
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQ 132
+RE + + + + + +A+D ++W+D IE + L+G R VL + Q
Sbjct: 1092 EREVL-----FFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQ 1146
Query: 133 PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR 192
P L V +L+W +D ++Q I ++I M ++
Sbjct: 1147 PVGLTV--FENWLYW-------------IDKQQQMI--EKIDMTGRE------------- 1176
Query: 193 NLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCL 252
+K I LS++ V ++++ Y +PC +NGGC+ +CL
Sbjct: 1177 GRTKVQARIAQLSDIHAVKELNLQEYRQ-----------------HPCAQDNGGCSHICL 1219
Query: 253 YNGVSAV-CACA-HGVVAQDGKSCSE 276
G C+C H V+ QD SC E
Sbjct: 1220 VKGDGTTRCSCPMHLVLLQDELSCGE 1245
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 188/649 (28%), Positives = 302/649 (46%), Gaps = 74/649 (11%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVS-QKKYPAVTACNLHIAVDWIAQNIYWSDPKE 109
+++W++++ + TI AFM+G+ E VV YP +AVDW+ +N+YW+D
Sbjct: 675 RIYWTDIS--LKTISRAFMNGSALEHVVEFGLDYPE------GMAVDWLGKNLYWADTGT 726
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
N IEV++L GQ+R VL+ +D P ALA+DP G+++W+E G P I RA +DG ++T L
Sbjct: 727 NRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 786
Query: 170 AQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSD--VSTISMKPYGDS------ 221
+ +T+D ++ +L I + L+ ++ P+G +
Sbjct: 787 VPNVGR-ANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIADDLPHPFGLTQYQDYI 845
Query: 222 -----------------------------YLKDIKIYSKDAQTGTNPCGVNNGGCAELCL 252
Y+ DI ++ Q G N C +NG C+ LCL
Sbjct: 846 YWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHCSHLCL 905
Query: 253 YNGVSA-VCAC-AHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKS--DLNSPFESIR 308
V VC C AH + D ++CS F+++S+ + I+ + + ++ D+ P S+R
Sbjct: 906 AVPVGGFVCGCPAHYSLNADNRTCSAPSTFLLFSQKSAINRMVIDEQQSPDIILPIHSLR 965
Query: 309 NSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGL------- 361
N + + YD K L++ D ++ +I +G ++ + + L
Sbjct: 966 N------VRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVVANSVANQNLEIQPYDL 1019
Query: 362 AYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNW 421
+ + Y+YWTC N ID+ + + VV G+ D+PR I ++ +Y+TN
Sbjct: 1020 SIDIYSRYIYWTCE---ATNVIDVTRLDGRSVGVVLKGEQDRPRAIVVNPEKGYMYFTNL 1076
Query: 422 NSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNR 481
P I+RA G E + + ++ P ALALD + KLFW D+ L +IE D G NR
Sbjct: 1077 QERSPKIERAALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLSGANR 1136
Query: 482 IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISD 541
IVL + L P + V+ +++W D + + + E ++ I + I A+ +
Sbjct: 1137 IVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKE 1196
Query: 542 -NLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKC 600
NL + PC NG C IC + G CSC VL++D SC CS F C
Sbjct: 1197 LNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPPTCSPQQFTC 1256
Query: 601 SDG--MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
G CIP CD C D SDE L C + C F+C + +CI
Sbjct: 1257 FTGDIDCIPVAWRCDGFTECEDHSDE--LNCPV--CSESQFQCASGQCI 1301
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 166/582 (28%), Positives = 279/582 (47%), Gaps = 60/582 (10%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+G ++W++ +V I +F+DG+ + VV+ A A IAVDW+A+N+YW+D
Sbjct: 369 PVEGYIYWTD--DEVRAIRRSFIDGSGSQFVVT-----AQIAHPDGIAVDWVARNLYWTD 421
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ IEV RL G R +LIS +++P A+ +DP GY++W++ G+IP I RA LDG +
Sbjct: 422 TGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR 481
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMK-P--YGDSYL 223
+L + + LD + ++ + I +++ + K P +G + L
Sbjct: 482 VVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLL 541
Query: 224 KDI------------KIYSKDAQ----------------------TGTNPCGVNNGGCAE 249
D +++ + A+ G+NPC +NGGC+
Sbjct: 542 GDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMGLKATSVHRVIGSNPCAEDNGGCSH 601
Query: 250 LCLYNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHM-TDKSDLNSPFESI 307
LCLY CAC G + D K+C +AF+++SR I I + T+ +++ P +
Sbjct: 602 LCLYRPQGLRCACPIGFELIGDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGV 661
Query: 308 RNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGSVEGLAYEYV 366
+ ++ L +D ++++DI TI+ F NGS ++E EG+A +++
Sbjct: 662 KEASA------LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL 715
Query: 367 HNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLP 426
LYW D N+I++ Q V+ D PR + +D + +YWT W P
Sbjct: 716 GKNLYWA---DTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK-P 771
Query: 427 SIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSK 486
I RA G + + ++ N L +D+ +L+W D + IE D G NR V++
Sbjct: 772 KIDRAAMDG-SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIAD 830
Query: 487 ISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDAC 546
P HPF + Y ++I+WTDW ++ RANK +G+ ++ ++ M I+ + A
Sbjct: 831 DLP-HPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQA- 888
Query: 547 AKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
C NG+C +C G VC C L DNR+C+
Sbjct: 889 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCS 930
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 286/587 (48%), Gaps = 67/587 (11%)
Query: 50 GKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKE 109
G ++WS+V+++ + + + VVS P AC DW+ + +YW+D +
Sbjct: 63 GLIYWSDVSEEAIKRTEFNKSESVQNVVVSGLLSPDGLAC------DWLGEKLYWTDSET 116
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ-TI 168
N IEV+ L G R VL +DQP A+A+DP SG+++W++ G++P I RAG+DG + I
Sbjct: 117 NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFVI 176
Query: 169 LAQEIIMPIKDITLDLKFFSAFYRN-----LSKGNI--------------HIISLSNLSD 209
+ EI P +TLD + ++ + + K N+ H +L+ D
Sbjct: 177 INTEIYWP-NGLTLDYQERKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED 235
Query: 210 V---------STISMKPYGDSYLK----------DIKIYSKDAQ-TGTNPCGVNNGGCAE 249
S ++ Y L+ DI +S+ Q TNPCG++NGGC+
Sbjct: 236 TLYWTDWNTHSILACNKYTGEGLREIHSNIFSPMDIHAFSQQRQPNATNPCGIDNGGCSH 295
Query: 250 LCLYNGVSAV--CACAHGV-VAQDGKSCSE--YDAFIMYSRVN-RIDSIHMTDKSDLNSP 303
LCL + V CAC GV + ++GK+C + + ++ R + R S+ D +D+
Sbjct: 296 LCLMSPVKPFYQCACPTGVKLMENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQ 355
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLA 362
E IR++ I + YD ++++D + I F +GS + ++ Q +G+A
Sbjct: 356 LEDIRHA------IAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIA 409
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
++V LYWT D ++I++ ++ ++PR I +D +YWT+W
Sbjct: 410 VDWVARNLYWT---DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWG 466
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRI 482
+P I+RA G ++ T + PN LALD+ ++WGDA+ DKIE + DGT R
Sbjct: 467 -EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGTGRR 525
Query: 483 VLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDN 542
VL + H F + G++++WTDW ++ R +K + E + + + MG+ A S +
Sbjct: 526 VLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQ-LPDLMGLKATSVH 584
Query: 543 LDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTI 589
PC NG C +C G + C+C G L+ D ++C +
Sbjct: 585 -RVIGSNPCAEDNGGCSHLCLYRPQG-LRCACPIGFELIGDMKTCIV 629
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 325 RKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKID 384
R+ L D G N+ G LE +V+ + + H +YW+ ++ I + +
Sbjct: 28 RRDLRLVDATNGKENATIVVGG-----LEDAAAVD---FVFGHGLIYWSDVSEEAIKRTE 79
Query: 385 LDSPKAQRIVVVR------------LGQH-----------------------------DK 403
+ ++ + VVV LG+ D+
Sbjct: 80 FNKSESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQ 139
Query: 404 PRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFW 463
PR I +D +YWT+W +P I+RA G II T+I PN L LD+Q KL+W
Sbjct: 140 PRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYW 198
Query: 464 GDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEV 523
DA+L+ I + + DGTNR + K S HPF + ++ + ++WTDW H++L NKYTGE +
Sbjct: 199 ADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGL 258
Query: 524 YTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVV-CSCFTGKVLME 582
+ NI PM I A S A PC NG C +C + C+C TG LME
Sbjct: 259 REIHSNIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLME 318
Query: 583 DNRSC 587
+ ++C
Sbjct: 319 NGKTC 323
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 60/266 (22%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V L+G +L E + + +I V P KG M+++N+ ++ IE A +DGT
Sbjct: 1038 IDVTRLDGRSVGVVLKGEQD------RPRAIVVNPEKGYMYFTNLQERSPKIERAALDGT 1091
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQ 132
+RE + + + + + +A+D ++W+D IE + L+G R VL + Q
Sbjct: 1092 EREVL-----FFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQ 1146
Query: 133 PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR 192
P L V +L+W +D ++Q I ++I M ++
Sbjct: 1147 PVGLTV--FENWLYW-------------IDKQQQMI--EKIDMTGRE------------- 1176
Query: 193 NLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCL 252
+K I LS++ V ++++ Y +PC +NGGC+ +CL
Sbjct: 1177 GRTKVQARIAQLSDIHAVKELNLQEYRQ-----------------HPCAQDNGGCSHICL 1219
Query: 253 YNGVSAV-CACA-HGVVAQDGKSCSE 276
G C+C H V+ QD SC E
Sbjct: 1220 VKGDGTTRCSCPMHLVLLQDELSCGE 1245
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 299/616 (48%), Gaps = 72/616 (11%)
Query: 93 IAVDWIAQNIYWSDP--KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES 150
+AVDW+A N+Y+++ E +IEV R+ YR VL+ VD P + VDP+ YLFW++
Sbjct: 2151 VAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPKHRYLFWADY 2210
Query: 151 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLD------------LKFFSAFYRNLSKGN 198
G+ P I R+ LD +T+L E I+ + + +D L + +R+ +
Sbjct: 2211 GQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDIIARIHRDGGESQ 2270
Query: 199 I------------------HIISLS-NLSDVSTISMKPYGD----------SYLKDIKIY 229
+ II + NL V S +P + L+D+ I+
Sbjct: 2271 VVRYGSRYPTPYGITVFGESIIWVDRNLRKVFQASKQPGNTDPPTVIRDSINLLRDVTIF 2330
Query: 230 SKD------AQTGTNPCGVNNGGCAELC--LYNGVSAVCACAHGVVAQDGKSC-SEYDAF 280
+ A+ NPC +NGGC+ C L + C CA G + DGK+C + + F
Sbjct: 2331 DEHVQPLSPAELNNNPCLQSNGGCSHFCFALPELPTPKCGCAFGTLEDDGKNCATSREDF 2390
Query: 281 IMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYS---DIQKGT 337
++YS N + S+H D D N PF++I M I L YD + +F++ + +G
Sbjct: 2391 LIYSLNNSLRSLHF-DPQDHNLPFQAISVEGMA---IALDYDRRNNRIFFTQKLNPIRGQ 2446
Query: 338 INSV--FFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVV 395
I+ V + S+ +LL G +G+A+++++ +Y++ ++ TIN + D + R V+
Sbjct: 2447 ISYVNLYSGASSPTILLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDG--SNRAVI 2504
Query: 396 VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALD 455
R+ KPR I +D C +YWT+W ++ I+RA G I+ T + PN L LD
Sbjct: 2505 ARVS---KPRAIVLDPCRGYMYWTDWGTNA-KIERATLGGNFRVPIVNTSLVWPNGLTLD 2560
Query: 456 HQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRA 515
+ + L+W DA L KIER G+NR V+ + H F + VYG++I+WTD+ + RA
Sbjct: 2561 LETDLLYWADASLQKIERSTLTGSNREVVISTA-FHSFGLTVYGQYIYWTDFYTKKIYRA 2619
Query: 516 NKYTGEEVYTLRKNI-RRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETG-QVVCS 573
NKY G ++ + + +P GI + PC NG C IC G + C
Sbjct: 2620 NKYDGSDLIAMTTRLPTQPSGISTVVKTQQQQCSNPCDQFNGGCSHICAPGPNGAECQCP 2679
Query: 574 CFTGKVLMEDNRSCTINT--VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAM 631
L DN+ C ++T C++ F C +G CI + CD +C D SDE CA
Sbjct: 2680 HEGSWYLANDNKYCVVDTGARCNQFQFTCLNGRCISQDWKCDNDNDCGDGSDELPTVCAF 2739
Query: 632 RDCRPGYFKCDNNKCI 647
CR F C N +C+
Sbjct: 2740 HTCRSTAFTCANGRCV 2755
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 172/639 (26%), Positives = 283/639 (44%), Gaps = 92/639 (14%)
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
++AVDWI +Y + + N I+V L G R LI+ + P +A+DP GYLF+S+ G
Sbjct: 470 NLAVDWINNKLYLVETRVNRIDVVNLEGNQRVTLITENLGHPRGIALDPTVGYLFFSDWG 529
Query: 152 KI---PLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLS 208
+ P + RA +DG + L + ITLDL ++ + I ++ +
Sbjct: 530 SLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQ 589
Query: 209 DVS-----TISMKPYGDSYLKD----------------------IKIYSKDAQT------ 235
+ ++ P+G S ++ ++Y + + T
Sbjct: 590 RKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKANKFTDTNPQVYHQSSLTPFGVTV 649
Query: 236 --------GTNPCGVNNGGCAELCLYN------GVSAVCACAHGV-VAQDGKSCSEYDAF 280
TNPCG NNGGCA++C+ + G+ C C G + D C F
Sbjct: 650 YHALRQPNATNPCGNNNGGCAQICVLSHRTDNGGLGYRCKCEFGFELDADEHHCVAVKNF 709
Query: 281 IMYSRVNRIDSIHMT--DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI 338
+++S + I T + D+ P + + + +D + T+FYSD+ K I
Sbjct: 710 LLFSSQTAVRGIPFTLSTQEDVMVPV-----TGSPSFFVGIDFDAQHSTIFYSDLSKNII 764
Query: 339 NSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVR 397
+G+ V+ R +VE L+++++ LYWT ++ + L + K++R ++
Sbjct: 765 YQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWTDGGSKSVTVMKL-ADKSRRQIISN 823
Query: 398 LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQ 457
L + PR I + ++ ++W I RA+ G I+ T + PN LA+D
Sbjct: 824 L---NNPRSIVVHPAAGYMFLSDW-FRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWS 879
Query: 458 AEKLFWGDARLDKIERCDYDGTNRIVLSKISPL-HPFDMAVYGEFIFWTDWVIHAVLRAN 516
+L+W DA DKIE + DG +R L + + HPF + V+ + +F TDW + A++R
Sbjct: 880 TSRLYWVDAFFDKIEHSNLDGLDRKRLGHVDQMTHPFGLTVFKDNVFLTDWRLGAIIRVR 939
Query: 517 KYTGEEVYTLRKNIRRPMGIVAISDNLDA----CAKTPCRHLNGNCDDICKLDETGQVVC 572
K G ++ +R+ I M + A +L C++T H NG+C C Q VC
Sbjct: 940 KSDGGDMTVVRRGISSIMHVKAYDADLQTGTNYCSQT--THPNGDCSHFCFPVPNFQRVC 997
Query: 573 SCFTGKVLMEDNRSCTINTV-------CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE- 624
C G L D +C + C F C++G C+P CD V +CHD SDE
Sbjct: 998 GCPYGMKLQRDQMTCEGDPAREPPTQQCGSSSFPCNNGKCVPSIFRCDGVDDCHDNSDEH 1057
Query: 625 --GIL--YCAMR--------DCRPGYFKCD-NNKCILSS 650
G L C+ C PG ++CD N C+ S
Sbjct: 1058 QCGALNNTCSSSAFTCVHGGQCIPGQWRCDKQNDCLDGS 1096
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 187/420 (44%), Gaps = 37/420 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQ-DGKSC---SEYDAFIMYSRVNRIDSIHMTDKSDLNS 302
C++ C S +C CA G + + DGKSC S + ++++S I ++ + S
Sbjct: 3165 CSQKCENVIGSYICKCAPGYIREPDGKSCRQNSNIEPYLVFSNRYYIRNLTIDGTS---- 3220
Query: 303 PFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGL 361
+ I + N++ L +D + L++ D +K I +F N +N ++ R E L
Sbjct: 3221 -YSLILQG--LGNVVALDFDRVEERLYWIDAEKQIIERMFLNKTNQETIISHRLRRAESL 3277
Query: 362 AYEYVHNYLYWTCNNDATINKIDL-DSPKAQRIVVVRLGQH----------DKPRGIDID 410
A ++V LYW DA ++ + + D QR + L QH + PRGI +
Sbjct: 3278 AVDWVSRKLYWL---DAILDCLFVSDLEGRQRKM---LAQHCVDANNTFCFENPRGIVLH 3331
Query: 411 SCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDK 470
+YW +W H I R G II+T I PNA+ +D+ + L+W DA L
Sbjct: 3332 PQRGYVYWADWGDHA-YIARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGY 3390
Query: 471 IERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
IE D +G +R + + HPF + ++ + +FWTDW V + NKY G L
Sbjct: 3391 IEFSDLEGHHRHTVYDGTLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTT 3450
Query: 531 RRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQ-VVCSCFTG--KVLMEDNRSC 587
+P I + PC NG C +C + G+ C C V + D C
Sbjct: 3451 HKPFDIHVLHPYRQPIMSNPCATNNGGCSHLCLIKAGGRGFTCECPDDFQTVQLRDRTLC 3510
Query: 588 TINTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
+CS F C + CIP CD +C D SDE L C R CR G F+C + C
Sbjct: 3511 M--PMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDESDL-CPHRFCRLGQFQCRDGNC 3567
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 258/599 (43%), Gaps = 73/599 (12%)
Query: 48 VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP 107
V G++FWS++ + AF +GT + V + + + IAVDWI +NIYW+D
Sbjct: 1477 VTGRVFWSDLLEG--KTWSAFQNGTDKRVV-----HDSGLSLTEMIAVDWIGRNIYWTDY 1529
Query: 108 KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG--YLFWSESGKIPLIARAGLDGKK 165
IEV+++ G +R VLIS V +P LA+DP G +FWS+ G P I RA +DG
Sbjct: 1530 TLETIEVSKIDGSHRTVLISKNVTKPRGLALDPRMGDNVMFWSDWGHHPRIERASMDGTM 1589
Query: 166 QTILAQEIIMPIKDITLD-----LKFFSAF-----YRNLSKGNIHIISLSNLSDVSTISM 215
+T++ QE I +++D + F A+ + + N + S+L ++
Sbjct: 1590 RTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIASDLVLHHPHAL 1649
Query: 216 KPYGDSY-------------------------------LKDIKIYSKDAQTGTNPCGVNN 244
+ DS L I I+ + NPC +
Sbjct: 1650 TLFEDSVFWTDRGTHQVMQANKWHGRNQSVVMYSVPQPLGIIAIHPSRQPSSPNPCA--S 1707
Query: 245 GGCAELCLYNGVSA---VCACAHGV-VAQDGKSCSEYD-AFIMYSRVNRIDSIHMTDKSD 299
C+ LCL + CAC G ++ D +C D F++ R N I I + +
Sbjct: 1708 ATCSHLCLLSAQEPRHYSCACPSGWNLSDDSVNCVRGDQPFLISVRENVIFGISLDPEVK 1767
Query: 300 LNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVE 359
N I + +++ ++ +D + +++ + G I+ V +GSN
Sbjct: 1768 SNDAMVPI---SGIQHGYDVEFDDSEQFIYWVE-NPGEIHRVKTDGSNRTAFAPLSLLGS 1823
Query: 360 GLAY--EYVHNYLYWTCNNDATINKIDL--DSPKAQRIVV---VRLGQHDKPRGIDIDSC 412
L ++V +Y+T +I + L D+ + ++ LG P GI +D
Sbjct: 1824 SLGLALDWVSRNIYYTTPASRSIEVLTLRGDTRYGKTLITNDGTPLGV-GFPVGIAVDPA 1882
Query: 413 DSRIYWTNW--NSHLPS-IQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLD 469
++YW++ +S +P+ I A G + + T ++ + LD Q +KL+W
Sbjct: 1883 RGKLYWSDHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 470 KIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKN 529
IER + DGT R++L HP+ + V+G F++++D + R +K +G R N
Sbjct: 1943 VIERGNVDGTERMILVH-HLAHPWGLVVHGSFLYYSDEQYEVIERVDKSSGSNKVVFRDN 2001
Query: 530 IRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
I G+ A + C + C IC G C+C +G L D RSC+
Sbjct: 2002 IPYLRGLRVYHHRNAADSSNGCSNNPNACQQICLPVPGGMFSCACASGFKLSPDGRSCS 2060
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 248/575 (43%), Gaps = 86/575 (14%)
Query: 96 DWIAQNIYWSDPKENVIEVARLTGQYRY--VLISG-----GVDQPSALAVDPESGYLFWS 148
DW+++NIY++ P IEV L G RY LI+ GV P +AVDP G L+WS
Sbjct: 1830 DWVSRNIYYTTPASRSIEVLTLRGDTRYGKTLITNDGTPLGVGFPVGIAVDPARGKLYWS 1889
Query: 149 ESGK---IPL-IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIH---- 200
+ G +P IA A +DG IL + ++ +TLD++ ++ S+G I
Sbjct: 1890 DHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIERGNV 1949
Query: 201 -----IISLSNLSD----VSTISMKPYGDS------------------------YLKDIK 227
+I + +L+ V S Y D YL+ ++
Sbjct: 1950 DGTERMILVHHLAHPWGLVVHGSFLYYSDEQYEVIERVDKSSGSNKVVFRDNIPYLRGLR 2009
Query: 228 IYS-KDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYS 284
+Y ++A +N C N C ++CL G CACA G ++ DG+SCS Y++FI+ S
Sbjct: 2010 VYHHRNAADSSNGCSNNPNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYNSFIVVS 2069
Query: 285 RVNRID--SIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT----- 337
+ + S+ ++D S+ P + +N++ D +++ D
Sbjct: 2070 MLPAVRGFSLELSDHSEAMVPV-----AGQGRNVLHADVDVANGFIYWCDFSSSVRSSNG 2124
Query: 338 INSVFFNGSNHRVLLE---RQGSVEGLAYEYVHNYLYWTCN--NDATINKIDLDSPKAQR 392
I + NGSN ++ + G+A ++V LY+T + I I +++ +
Sbjct: 2125 IRRIKPNGSNFTNIVTYGIGANGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRV 2184
Query: 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNAL 452
++ V + D PR I +D ++W ++ P I+R+F +++ I P L
Sbjct: 2185 LLKVSV---DMPRHIVVDPKHRYLFWADY-GQKPKIERSFLDCTNRTVLVSEGIVTPRGL 2240
Query: 453 ALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLH-PFDMAVYGEFIFWTDWVIHA 511
A+DH ++W D LD I R DG V+ S P+ + V+GE I W D +
Sbjct: 2241 AVDHDTGYIYWVDDSLDIIARIHRDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLRK 2300
Query: 512 VLRANKYTG--EEVYTLRKNIRRPMGIVAISDNLDACAKT-----PCRHLNGNCDDIC-K 563
V +A+K G + +R +I + +++ + PC NG C C
Sbjct: 2301 VFQASKQPGNTDPPTVIRDSINLLRDVTIFDEHVQPLSPAELNNNPCLQSNGGCSHFCFA 2360
Query: 564 LDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDF 598
L E C C G L +D ++C S DF
Sbjct: 2361 LPELPTPKCGCAFG-TLEDDGKNCAT----SREDF 2390
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 172/351 (49%), Gaps = 16/351 (4%)
Query: 245 GGCAELCLYNGVSAVCAC-AHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSP 303
G C++ C+ S CAC + DG++C + + V D I M + +
Sbjct: 1399 GFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTASENLLLVVASRDKIIMDNITAHTHN 1458
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSV-EGLA 362
S+ ++ L +D +F+SD+ +G S F NG++ RV+ + S+ E +A
Sbjct: 1459 IYSLVQDVSF--VVALDFDSVTGRVFWSDLLEGKTWSAFQNGTDKRVVHDSGLSLTEMIA 1516
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDS--CDSRIYWTN 420
+++ +YWT D T+ I++ V+ KPRG+ +D D+ ++W++
Sbjct: 1517 VDWIGRNIYWT---DYTLETIEVSKIDGSHRTVLISKNVTKPRGLALDPRMGDNVMFWSD 1573
Query: 421 WNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
W H P I+RA G I+ I P L++D+ +++ DA LD IE CDYDG N
Sbjct: 1574 WGHH-PRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGQN 1632
Query: 481 R--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVA 538
R ++ S + HP + ++ + +FWTD H V++ANK+ G + ++ +P+GI+A
Sbjct: 1633 RRQVIASDLVLHHPHALTLFEDSVFWTDRGTHQVMQANKWHGRNQSVVMYSVPQPLGIIA 1692
Query: 539 ISDNLDACAKTPCRHLNGNCDDICKL--DETGQVVCSCFTGKVLMEDNRSC 587
I + + PC + C +C L E C+C +G L +D+ +C
Sbjct: 1693 IHPSRQPSSPNPC--ASATCSHLCLLSAQEPRHYSCACPSGWNLSDDSVNC 1741
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 26/359 (7%)
Query: 245 GGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAF----IMYS--RVNRIDSIHMTDKS 298
G C + C C C G + + G+ C D+F I++S R + +H +
Sbjct: 355 GICDQKCESRQGRHQCLCEEGYILERGQHCKSNDSFSAASIIFSNGRDLLVGDLHGRN-- 412
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GS 357
F + S ++ + + Y++ +F++D + + S NG N + +L +
Sbjct: 413 -----FRILAESKNRGIVMGVDFHYQKHRVFWTDPMQAKVFSTDINGLNTQEILNVSIDA 467
Query: 358 VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIY 417
E LA ++++N LY + +N+ID+ + + + V + PRGI +D ++
Sbjct: 468 PENLAVDWINNKLYLV---ETRVNRIDVVNLEGNQRVTLITENLGHPRGIALDPTVGYLF 524
Query: 418 WTNWNS--HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCD 475
+++W S P ++RAF G + ++TT + P + LD +++++W D+R D IE
Sbjct: 525 FSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDSRYDYIETVT 584
Query: 476 YDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRP 533
YDG R +++ L HPF ++++ E +F+TDW AV++ANK+T ++ P
Sbjct: 585 YDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKANKFTDTNPQVYHQSSLTP 644
Query: 534 MGIVAISDNLDACAKTPCRHLNGNCDDICKL----DETG-QVVCSCFTGKVLMEDNRSC 587
G+ A PC + NG C IC L D G C C G L D C
Sbjct: 645 FGVTVYHALRQPNATNPCGNNNGGCAQICVLSHRTDNGGLGYRCKCEFGFELDADEHHC 703
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 43/213 (20%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+AVDW+ ++IYWSD K IEVA L G+YR LI+ +DQP+A+AV+P+ G +FW++ GK
Sbjct: 4149 LAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTDQGK 4208
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVST 212
P I A ++G+ +++LA + +++D Y + SK ++ + +D
Sbjct: 4209 QPKIESAWMNGEHRSVLASANLGWPNGLSIDYLNGDRIYWSDSKEDVIESIKYDGTDRRL 4268
Query: 213 I---SMKPYG-----------------------------------DSYLKDIKIYS--KD 232
I +MKP+ + +L ++I+ +
Sbjct: 4269 IINDAMKPFSLDIFEDQLYWVAKEKGEVWRQNKFGKGNKEKLLVVNPWLTQVRIFHQLRY 4328
Query: 233 AQTGTNPCGVNNGGCAELCLYNGVSAVCACAHG 265
Q+ +NPC C+ LCL CAC G
Sbjct: 4329 NQSVSNPC---KQVCSHLCLLRPGGYSCACPQG 4358
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 56/264 (21%)
Query: 48 VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP 107
V+ +++W + KQ+ IE F++ T +ET++S + A + +AVDW+++ +YW D
Sbjct: 3239 VEERLYWIDAEKQI--IERMFLNKTNQETIISHRLRRAES-----LAVDWVSRKLYWLDA 3291
Query: 108 KENVIEVARLTGQYRYVLISGGVD--------QPSALAVDPESGYLFWSESGKIPLIARA 159
+ + V+ L G+ R +L VD P + + P+ GY++W++ G IAR
Sbjct: 3292 ILDCLFVSDLEGRQRKMLAQHCVDANNTFCFENPRGIVLHPQRGYVYWADWGDHAYIARI 3351
Query: 160 GLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTIS---MK 216
G+DG +T++ I IT+D ++ + G I L +
Sbjct: 3352 GMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDGTLPH 3411
Query: 217 PYGDSYLKDIKIY----SKDAQTG--------------------------------TNPC 240
P+ + +D + ++ + G +NPC
Sbjct: 3412 PFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVLHPYRQPIMSNPC 3471
Query: 241 GVNNGGCAELCLY--NGVSAVCAC 262
NNGGC+ LCL G C C
Sbjct: 3472 ATNNGGCSHLCLIKAGGRGFTCEC 3495
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 326 KTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDL 385
K + D + G+ N V + L++ +GLA ++V ++YW+ I L
Sbjct: 4118 KRAYLPDFESGSNNPVREVDLGLKYLMQ----PDGLAVDWVGRHIYWSDAKSQRIEVATL 4173
Query: 386 DSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD 445
D + ++ +L D+P I ++ ++WT+ P I+ A+ +G + + +
Sbjct: 4174 DGRYRKWLITTQL---DQPAAIAVNPKLGLMFWTDQGKQ-PKIESAWMNGEHRSVLASAN 4229
Query: 446 ITMPNALALDH-QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFW 504
+ PN L++D+ ++++W D++ D IE YDGT+R ++ + + PF + ++ + ++W
Sbjct: 4230 LGWPNGLSIDYLNGDRIYWSDSKEDVIESIKYDGTDRRLIINDA-MKPFSLDIFEDQLYW 4288
Query: 505 TDWVIHAVLRANKY 518
V R NK+
Sbjct: 4289 VAKEKGEVWRQNKF 4302
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVV 62
I S +I V L+G Y+ ++ T+ L + ++IAV P G MFW++ KQ
Sbjct: 4158 IYWSDAKSQRIEVATLDGRYRKWLI------TTQLDQPAAIAVNPKLGLMFWTDQGKQP- 4210
Query: 63 TIEMAFMDGTKRETVVSQK-KYPAVTACNLHIAVDWI-AQNIYWSDPKENVIEVARLTGQ 120
IE A+M+G R + S +P +++D++ IYWSD KE+VIE + G
Sbjct: 4211 KIESAWMNGEHRSVLASANLGWPN------GLSIDYLNGDRIYWSDSKEDVIESIKYDGT 4264
Query: 121 YRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIK 178
R ++I+ + +P +L + + Y E G++ + G K++ ++ + ++
Sbjct: 4265 DRRLIINDAM-KPFSLDIFEDQLYWVAKEKGEVWRQNKFGKGNKEKLLVVNPWLTQVR 4321
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D SC + C+E +F+C+D CIP CD+ +C D SDE C M+ C P +F+C
Sbjct: 3752 DEESC-VPRECTESEFRCADQQCIPSRWVCDQENDCGDNSDE--RDCEMKTCHPEHFQCT 3808
Query: 643 NNKCI 647
+ C+
Sbjct: 3809 SGHCV 3813
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 570 VVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
VC+ F D + C DF+C + CIP CD + +C D SDE C
Sbjct: 3699 AVCNGFDDCRDNSDEQGCESVPCHPSGDFRCGNHHCIPLRWKCDGIDDCGDNSDE--ESC 3756
Query: 630 AMRDCRPGYFKCDNNKCILS 649
R+C F+C + +CI S
Sbjct: 3757 VPRECTESEFRCADQQCIPS 3776
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 581 MEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
+++ ++CT+ CS +F C++G CI + CDR +C D SDE C+ CR F
Sbjct: 2984 LDELQNCTMR-ACSTGEFSCANGRCIRQSFRCDRRNDCGDYSDE--RGCSYPPCRDDQFT 3040
Query: 641 CDNNKCI 647
C N +CI
Sbjct: 3041 CQNGQCI 3047
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D C + S +F CS+G CIP + C+ + NCHD C C+P + KC
Sbjct: 2772 DEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHDNDTSDEKNCPPITCQPDFAKC 2830
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD--CRPGYFK 640
D R C+ C + F C +G CI CD +C D SDE C + C P F+
Sbjct: 3025 DERGCSY-PPCRDDQFTCQNGQCITKLYVCDEDNDCGDGSDEQEHLCHTPEPTCPPHQFR 3083
Query: 641 CDNNKCI 647
CDN CI
Sbjct: 3084 CDNGHCI 3090
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD-NNKCILSS 650
C +F+C +G CIP + CD +C D +DE + C R C G+F C CI SS
Sbjct: 28 CGSGNFRCDNGYCIPASWRCDGTRDCLDDTDE--IGCPPRSCGSGFFLCPAEGTCIPSS 84
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 592 VCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
+C +F+C DG CIP CD +C SDE C + C P +F CDN CI +S
Sbjct: 1230 MCHPDEFQCQGDGTCIPNTWECDGHPDCIQGSDEHN-GCVPKTCSPSHFLCDNGNCIYNS 1288
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPG 637
D R C + T EH F+C+ G C+P CD +C D SDE C R C
Sbjct: 3791 DERDCEMKTCHPEH-FQCTSGHCVPKALACDGRADCLDASDESA--CPTRFPNGTYCPAA 3847
Query: 638 YFKCDNNKCILS 649
F+C N+ CI S
Sbjct: 3848 MFECKNHVCIQS 3859
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +CT T+CS+ +F+C G CI CD +C D SDE C C F C
Sbjct: 175 DEANCT--TLCSQKEFQCGSGECILRAYVCDHDNDCEDNSDE--HNCNYDTCGGHQFTCS 230
Query: 643 NNKCI 647
N +CI
Sbjct: 231 NGQCI 235
Score = 40.4 bits (93), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 577 GKVLMEDNRSCTINTVCSEHDFKC-----SDGMCIPFNQTCDRVYNCHDKSDEGILYCAM 631
G + ED R CS +F C + CIP + CD +C D DE + C M
Sbjct: 2934 GDMSDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCADALDE-LQNCTM 2992
Query: 632 RDCRPGYFKCDNNKCILSS 650
R C G F C N +CI S
Sbjct: 2993 RACSTGEFSCANGRCIRQS 3011
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
++ C F C + MCIP CD +C D SDE A C P F+C +++CI
Sbjct: 1107 SSTCPPTSFTCDNHMCIPKEWVCDTDNDCSDGSDEKNCQ-ASGTCHPTQFRCPDHRCI 1163
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCR-PGYFKCDNNKCI 647
T C F+C + +CI CD +C D SDE I C C P F+CDN++CI
Sbjct: 3842 TYCPAAMFECKNHVCIQSFWICDGENDCVDGSDEEIHLCFNVPCESPQRFRCDNSRCI 3899
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 583 DNRSCTINTVCSEHDFKCSDGM-CIPFNQTCDRVYNCHDKSDEGILYCAMRD---CRPGY 638
D C +N C+ FKC+DG CI CD VY+C D SDE C R C P
Sbjct: 1180 DEAGCVLN--CTSSQFKCADGSSCINSRYRCDGVYDCKDNSDEA--GCPTRPPGMCHPDE 1235
Query: 639 FKC 641
F+C
Sbjct: 1236 FQC 1238
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILY--------CAMRDCRPGYFKCD 642
T CS CS+G C+P CD V +C D SDE Y CA C KCD
Sbjct: 106 TTCSSQQLTCSNGQCVPIEYRCDHVSDCPDGSDERNCYYPTCDQLTCANGACYNTSQKCD 165
Query: 643 N 643
+
Sbjct: 166 H 166
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
ED C T C FKC++G CIP + CD +C D SDE I +C + C
Sbjct: 3627 EDPSHCASRT-CRPGQFKCNNGRCIPQSWKCDVDNDCGDYSDEPI-----HECMTAAYNC 3680
Query: 642 DNN 644
DN+
Sbjct: 3681 DNH 3683
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 26/113 (23%)
Query: 545 ACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC------------TINTV 592
C+ PCR C + GQ C T + +++ C T
Sbjct: 3028 GCSYPPCRDDQFTC-------QNGQ----CITKLYVCDEDNDCGDGSDEQEHLCHTPEPT 3076
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK-CDNN 644
C H F+C +G CI C+ V +C D SDE C + +C+ CD+N
Sbjct: 3077 CPPHQFRCDNGHCIEMGTVCNHVDDCSDNSDEK--GCGINECQDSSISHCDHN 3127
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 592 VCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKCDNNKCILS 649
C ++F+C S CIP CD +C D SDE ++ C F CDN +CI S
Sbjct: 2864 TCRSNEFQCVSPHRCIPSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRCISS 2923
Query: 650 S 650
S
Sbjct: 2924 S 2924
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGIL-YCAMRDCRPGYFKCDNNK 645
CS + F C +G CI + CD +C D SDE +C +++C F C N++
Sbjct: 2908 CSANQFHCDNGRCISSSWVCDGDNDCGDMSDEDQRHHCELQNCSSTEFTCINSR 2961
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
D +C +T C H F CS+G CI N CD +C D DE
Sbjct: 213 DEHNCNYDT-CGGHQFTCSNGQCINQNWVCDGDDDCQDSGDE 253
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 594 SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC---AMRDCRPGYFKCDNNKCI 647
S F+C + CI +Q C+ V +C D SDE +C + C +KC N C+
Sbjct: 3887 SPQRFRCDNSRCIYGHQLCNGVDDCGDGSDEKEEHCRKPTHKPCTDTEYKCSNGNCV 3943
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC- 641
D ++C + C F+C D CI CD +C D SDE C + +C FKC
Sbjct: 1140 DEKNCQASGTCHPTQFRCPDHRCISPLYVCDGDKDCVDGSDEA--GCVL-NCTSSQFKCA 1196
Query: 642 DNNKCILSSH 651
D + CI S +
Sbjct: 1197 DGSSCINSRY 1206
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEG--ILYCAMRDCRPGYFK 640
D R+C T C++G C +Q CD +C D SDE C+ ++ F+
Sbjct: 138 DERNCYYPTC---DQLTCANGACYNTSQKCDHKVDCRDSSDEANCTTLCSQKE-----FQ 189
Query: 641 CDNNKCILSSH 651
C + +CIL ++
Sbjct: 190 CGSGECILRAY 200
Score = 33.1 bits (74), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
C++ ++KCS+G C+ + CD V +C D SDE
Sbjct: 3930 CTDTEYKCSNGNCVSQHYVCDNVDDCGDLSDE 3961
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 297/621 (47%), Gaps = 74/621 (11%)
Query: 93 IAVDWIAQNIYWSDP--KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES 150
IAVDW+A N+Y+++ E +IEV R+ YR VL+ VD P + VDP++ YLFW++
Sbjct: 2150 IAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADY 2209
Query: 151 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLS----- 205
G+ P I R+ LD +T+L E I+ + + +D ++ + S I I ++
Sbjct: 2210 GQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSE 2269
Query: 206 --------------------------NLSDVSTISMKPYGD----------SYLKDIKIY 229
NL + S +P ++L+D+ I+
Sbjct: 2270 VIRYGSRYPTPYGITVFENSIIWVDRNLKKIFQASKEPENTEPPTVIRDNINWLRDVTIF 2329
Query: 230 SKD------AQTGTNPCGVNNGGCAELC--LYNGVSAVCACAHGVVAQDGKSCS-EYDAF 280
K A+ NPC NNGGC+ LC L + C CA G + DGK+C+ + F
Sbjct: 2330 DKQVQPRSPAEVNNNPCLENNGGCSHLCFALPGLHTPKCDCAFGTLQSDGKNCAISTENF 2389
Query: 281 IMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQK---GT 337
++++ N + S+H+ D + + PF++I + + ++ L YD ++++ G
Sbjct: 2390 LIFALSNSLRSLHL-DPENHSPPFQTI---NVERTVMSLDYDSVSDRIYFTQNLASGVGQ 2445
Query: 338 INSVFFNGSNHR--VLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVV 395
I+ + H V+ G+ +G+A++++ +Y++ + IN + D + R V+
Sbjct: 2446 ISYATLSSGIHTPTVIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDG--SNRTVI 2503
Query: 396 VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALD 455
R+ KPR I +D C +YW +W++H I+RA G I+ + + MP+ L LD
Sbjct: 2504 ARV---PKPRAIVLDPCQGYLYWADWDTHA-KIERATLGGNFRVPIVNSSLVMPSGLTLD 2559
Query: 456 HQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRA 515
++ + L+W DA L +IER G +R V+ + +H F + +YG++I+WTD + RA
Sbjct: 2560 YEEDLLYWVDASLQRIERSTLTGVDREVIVNAA-VHAFGLTLYGQYIYWTDLYTQRIYRA 2618
Query: 516 NKYTGEEVYTLRKNI-RRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSC 574
NKY G + N+ +P GI + N PC NG C IC G C C
Sbjct: 2619 NKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNG-AECQC 2677
Query: 575 -FTGKVLMEDNRS-CTINT--VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCA 630
G + +NR C ++ C F CS+G CI CD +C D SDE CA
Sbjct: 2678 PHEGNWYLANNRKHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDCGDGSDEMESVCA 2737
Query: 631 MRDCRPGYFKCDNNKCILSSH 651
+ C P F C N +C+ S+
Sbjct: 2738 LHTCSPTAFTCANGRCVQYSY 2758
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 181/669 (27%), Positives = 302/669 (45%), Gaps = 97/669 (14%)
Query: 51 KMFWSN-VTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKE 109
++FW++ V +V ++++ ++ +E + + P ++AVDW+ IY + K
Sbjct: 437 RVFWTDTVQNKVFSVDINGLN--IQEVLNVSVETPE------NLAVDWVNNKIYLVETKV 488
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE----SGKIPLIARAGLDGKK 165
N I++ L G YR LI+ + P +AVDP GYLF+S+ SG+ P + RA +DG
Sbjct: 489 NRIDMVNLDGSYRVTLITENLGHPRGIAVDPTVGYLFFSDWESLSGE-PKLERAFMDGSN 547
Query: 166 QTILAQEIIMPIKDITLDL----------KF-----------------------FSAFYR 192
+ L + + +TLD+ +F F
Sbjct: 548 RKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTVVHGGSLIPHPFGV 607
Query: 193 NLSKGNIHIISLSNLSDVST-------------ISMKPYGDSYLKDIKIYSKDAQT-GTN 238
+L +G + + ++ + S++PYG + +Y Q TN
Sbjct: 608 SLFEGQVFFTDWTKMAVLKANKFTETNPQVYYQASLRPYG------VTVYHSLRQPYATN 661
Query: 239 PCGVNNGGCAELCLY------NGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDS 291
PC NNGGC ++C+ +G+ C C G + D + C F+++S I
Sbjct: 662 PCKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQNFLIFSSQVAIRG 721
Query: 292 IHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVL 351
I T + + N + + + +D + T+F+SD+ K I +G+ +L
Sbjct: 722 IPFTLSTQEDVMVPVSGNPSFF---VGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREIL 778
Query: 352 L-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDID 410
R +VE LA++++ LYWT ++ +I+ + L + K +R VV L + PR + +
Sbjct: 779 AANRVENVESLAFDWISKNLYWTDSHYKSISVMRL-ADKTRRTVVQYL---NNPRSVVVH 834
Query: 411 SCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDK 470
+++T+W I RA+ G +I T + PN LA+D A +L+W DA DK
Sbjct: 835 PFAGYLFFTDW-FRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDK 893
Query: 471 IERCDYDGTNRIVLSKISPL-HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKN 529
IE +DG +R L I + HPF +A++GE +F+TDW + A++R K G E+ +R
Sbjct: 894 IEHSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKADGGEMTVIRSG 953
Query: 530 IRRPMGI----VAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNR 585
I + + V I +AC + H NG+C C Q VC C G L ++
Sbjct: 954 IAYILHLKSYDVNIQTGSNACNQP--THPNGDCSHFCFPVPNFQRVCGCPYGMRLASNHL 1011
Query: 586 SCTINTV-------CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY 638
+C + C F C +G C+P CD V +CHD SDE + C
Sbjct: 1012 TCEGDPTNEPPTEQCGLFSFPCKNGRCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSA 1071
Query: 639 FKCDNNKCI 647
F C + +CI
Sbjct: 1072 FTCGHGECI 1080
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 156/611 (25%), Positives = 265/611 (43%), Gaps = 77/611 (12%)
Query: 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDW 97
S I ++ + G++FWS+ T+ AF +GT R V T IA+DW
Sbjct: 1466 SYIVAVDFDSISGRIFWSDATQG--KTWSAFQNGTDRRVVFDSSIILTET-----IAIDW 1518
Query: 98 IAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPE--SGYLFWSESGKIPL 155
+ +N+YW+D IEV+++ G +R VLIS + P LA+DP LFWS+ G P
Sbjct: 1519 VGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPRMNEHLLFWSDWGHHPR 1578
Query: 156 IARAGLDGKKQTILAQEIIMPIKDITLD-----LKFFSAF--YRNLSKGNIHIISLSNLS 208
I RA +DG +T++ Q+ I +T+D L F ++ Y + N H S
Sbjct: 1579 IERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIAS 1638
Query: 209 DVSTISMKPYGDSYLKD------------------------------------IKIYSKD 232
D+ I PY + +D + ++
Sbjct: 1639 DL--IIRHPYALTLFEDSVYWTDRATRRVMRANKWHGGNQSVVMYNIQWPLGIVAVHPSK 1696
Query: 233 AQTGTNPCGVNNGGCAELCLYNGVSA---VCACAHG-VVAQDGKSCSEYD-AFIMYSRVN 287
NPC + C+ LCL + C C G ++ D +C D F++ R +
Sbjct: 1697 QPNSVNPCAFSR--CSHLCLLSSQGPHFYSCVCPSGWSLSPDLLNCLRDDQPFLITVRQH 1754
Query: 288 RIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN 347
I I + + N I ++N +++ +D + +++ + G I+ V +G+N
Sbjct: 1755 IIFGISLNPEVKSNDAMVPIAG---IQNGLDVEFDDAEQYIYWVE-NPGEIHRVKTDGTN 1810
Query: 348 HRVL--LERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSP-KAQRIVVVRLGQH--- 401
V + G LA +++ LY T +I + L + ++ ++ G
Sbjct: 1811 RTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLIANDGTALGV 1870
Query: 402 DKPRGIDIDSCDSRIYWTNW--NSHLPS-IQRAFFSGFGTESIITTDITMPNALALDHQA 458
P GI +D ++YW++ +S +P+ I A G +++ T ++ + LD +
Sbjct: 1871 GFPIGITVDPARGKLYWSDQGTDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEE 1930
Query: 459 EKLFWGDARLDKIERCDYDGTNRIVL-SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANK 517
+KL+W IER + DGT+R++L ++S HP+ +AV+ F+++TD + R +K
Sbjct: 1931 QKLYWAVTGRGVIERGNVDGTDRMILVHQLS--HPWGIAVHDSFLYYTDEQYEVIERVDK 1988
Query: 518 YTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTG 577
TG LR N+ G+ A + C + C IC G C+C TG
Sbjct: 1989 ATGANKIVLRDNVPNLRGLQVYHRRNAAESSNGCSNNMNACQQICLPVPGGLFSCACATG 2048
Query: 578 KVLMEDNRSCT 588
L DNRSC+
Sbjct: 2049 FKLNPDNRSCS 2059
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 190/420 (45%), Gaps = 37/420 (8%)
Query: 247 CAELCLYNGVSAVCACAHGVVAQ-DGKSC---SEYDAFIMYSRVNRIDSIHMTDKSDLNS 302
C++ C S +C CA G + + DGK+C S + ++++S NR ++T ++
Sbjct: 3163 CSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS--NRYYLRNLT----IDG 3216
Query: 303 PFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGL 361
F S+ + N++ L +D K L++ D Q+ I +F N +N ++ R + E L
Sbjct: 3217 YFYSLILEGL-DNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETIINHRLPAAESL 3275
Query: 362 AYEYVHNYLYWTCNNDATINKI---DLDSPKAQRIVVVRLGQH----------DKPRGID 408
A ++V LYW DA ++ + DL+ + L QH D PRG+
Sbjct: 3276 AVDWVSRKLYWL---DARLDGLFVSDLNGGHRRM-----LAQHCVDANNTFCFDNPRGLA 3327
Query: 409 IDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARL 468
+ +YW +W H I R G II+T + PN + +D+ + L+W DA L
Sbjct: 3328 LHPQYGYLYWADW-GHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHL 3386
Query: 469 DKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528
IE D +G +R + + HPF + ++ + I+WTDW V + NKY G TL
Sbjct: 3387 GYIEYSDLEGHHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVN 3446
Query: 529 NIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQ-VVCSCFTGKVLMEDNRSC 587
RP I PC NG C +C + G+ C C ++ + S
Sbjct: 3447 TTHRPFDIHVYHPYRQPIVSNPCGTNNGGCSHLCLIKPGGKGFTCECPDDFRTLQLSGST 3506
Query: 588 TINTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
+CS F C++ CIP CD +C D SDE + C R CR G F+C + C
Sbjct: 3507 YCMPMCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDE-LALCPQRFCRLGQFQCSDGNC 3565
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 260/610 (42%), Gaps = 106/610 (17%)
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTG--QY 121
I DGT R S ++ ++++A+DWI++N+Y ++P+ IEV L G +Y
Sbjct: 1801 IHRVKTDGTNRTVFASI----SMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDIRY 1856
Query: 122 RYVLISG-----GVDQPSALAVDPESGYLFWSESGK---IPL-IARAGLDGKKQTILAQE 172
R LI+ GV P + VDP G L+WS+ G +P IA A +DG L
Sbjct: 1857 RKTLIANDGTALGVGFPIGITVDPARGKLYWSDQGTDSGVPAKIASANMDGTSVKTLFTG 1916
Query: 173 IIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISM-----KPYG----DSYL 223
+ ++ +TLD++ ++ +G +I N+ + + P+G DS+L
Sbjct: 1917 NLEHLECVTLDIEEQKLYWAVTGRG---VIERGNVDGTDRMILVHQLSHPWGIAVHDSFL 1973
Query: 224 -------------------------------KDIKIY-SKDAQTGTNPCGVNNGGCAELC 251
+ +++Y ++A +N C N C ++C
Sbjct: 1974 YYTDEQYEVIERVDKATGANKIVLRDNVPNLRGLQVYHRRNAAESSNGCSNNMNACQQIC 2033
Query: 252 L-YNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRID--SIHMTDKSDLNSPFESI 307
L G CACA G + D +SCS Y++FI+ S ++ I S+ ++D S+ P
Sbjct: 2034 LPVPGGLFSCACATGFKLNPDNRSCSPYNSFIVVSMLSAIRGFSLELSDHSETMVPV--- 2090
Query: 308 RNSTMMKNIIELSYDYKRKTLFYSDIQKG-----TINSVFFNGSNHRVLLER---QGSVE 359
+ +N + + D +++ D I + +GS+ ++ + V
Sbjct: 2091 --AGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVR 2148
Query: 360 GLAYEYVHNYLYWTCN--NDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIY 417
G+A ++V LY+T ++ I + +++ + ++ V + D PR I +D + ++
Sbjct: 2149 GIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTV---DMPRHIVVDPKNRYLF 2205
Query: 418 WTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD 477
W ++ P I+R+F +++ I P LA+D ++W D LD I R +
Sbjct: 2206 WADYGQR-PKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRIN 2264
Query: 478 GTNRIVLSKISPLH-PFDMAVYGEFIFWTDWVIHAVLRANK--YTGEEVYTLRKNIR--- 531
G N V+ S P+ + V+ I W D + + +A+K E +R NI
Sbjct: 2265 GENSEVIRYGSRYPTPYGITVFENSIIWVDRNLKKIFQASKEPENTEPPTVIRDNINWLR 2324
Query: 532 ---------RPMGIVAISDNLDACAKTPCRHLNGNCDDIC-KLDETGQVVCSCFTGKVLM 581
+P +++N PC NG C +C L C C G L
Sbjct: 2325 DVTIFDKQVQPRSPAEVNNN-------PCLENNGGCSHLCFALPGLHTPKCDCAFG-TLQ 2376
Query: 582 EDNRSCTINT 591
D ++C I+T
Sbjct: 2377 SDGKNCAIST 2386
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 26/359 (7%)
Query: 245 GGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAF----IMYS--RVNRIDSIHMTDKS 298
G C + C +C C G + + G+ C D+F I++S R I IH
Sbjct: 356 GICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEASIIFSNGRDLLIGDIH----- 410
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-HRVLLERQGS 357
F + S + +++ Y + +F++D + + SV NG N VL +
Sbjct: 411 --GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDINGLNIQEVLNVSVET 468
Query: 358 VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIY 417
E LA ++V+N +Y I+ ++LD ++ LG PRGI +D ++
Sbjct: 469 PENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGH---PRGIAVDPTVGYLF 525
Query: 418 WTNWNS--HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCD 475
+++W S P ++RAF G + ++ T + P + LD +++++W D+R D IE
Sbjct: 526 FSDWESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVT 585
Query: 476 YDGTNRIVLSKISPL--HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRP 533
YDG R + L HPF ++++ +F+TDW AVL+ANK+T + RP
Sbjct: 586 YDGIQRKTVVHGGSLIPHPFGVSLFEGQVFFTDWTKMAVLKANKFTETNPQVYYQASLRP 645
Query: 534 MGIVAISDNLDACAKTPCRHLNGNCDDICKL----DETG-QVVCSCFTGKVLMEDNRSC 587
G+ A PC+ NG C+ +C L D G C C G L D R C
Sbjct: 646 YGVTVYHSLRQPYATNPCKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHC 704
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 22/354 (6%)
Query: 245 GGCAELCLYNGVSAVCACAHG-VVAQDGKSC---SEYDAFIMYSRVNRIDSIHMTDKSDL 300
G C++ C S C+C G ++ DG++C + ++ + N+I + +T S +
Sbjct: 1398 GSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQNKIIADSVT--SQV 1455
Query: 301 NSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSV-E 359
++ + + N + I+ + +D +F+SD +G S F NG++ RV+ + + E
Sbjct: 1456 HNIYSLVENGSY---IVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRVVFDSSIILTE 1512
Query: 360 GLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDS--CDSRIY 417
+A ++V LYWT D + I++ V+ PRG+ +D + ++
Sbjct: 1513 TIAIDWVGRNLYWT---DYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 418 WTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD 477
W++W H P I+RA G I+ I P L +D+ L++ D+ LD ++ CDY+
Sbjct: 1570 WSDWGHH-PRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYN 1628
Query: 478 GTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMG 535
G +R ++ S + HP+ + ++ + ++WTD V+RANK+ G + NI+ P+G
Sbjct: 1629 GHHRRQVIASDLIIRHPYALTLFEDSVYWTDRATRRVMRANKWHGGNQSVVMYNIQWPLG 1688
Query: 536 IVAISDNLDACAKTPCRHLNGNCDDICKLDETGQ--VVCSCFTGKVLMEDNRSC 587
IVA+ + + PC C +C L G C C +G L D +C
Sbjct: 1689 IVAVHPSKQPNSVNPCAF--SRCSHLCLLSSQGPHFYSCVCPSGWSLSPDLLNC 1740
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 72/272 (26%)
Query: 48 VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP 107
V+ +++W + +QV IE F++ T +ET+++ + PA + +AVDW+++ +YW D
Sbjct: 3237 VEKRLYWIDTQRQV--IERMFLNKTNKETIINHR-LPAAES----LAVDWVSRKLYWLDA 3289
Query: 108 KENVIEVARLTGQYRYVLISGGVD--------QPSALAVDPESGYLFWSESGKIPLIARA 159
+ + + V+ L G +R +L VD P LA+ P+ GYL+W++ G I R
Sbjct: 3290 RLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPRGLALHPQYGYLYWADWGHRAYIGRV 3349
Query: 160 GLDG-KKQTILAQEIIMP---IKDITLDLKFFSAFY------------------------ 191
G+DG K I++ ++ P D T DL +++ +
Sbjct: 3350 GMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDGALPH 3409
Query: 192 ------------------RNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDA 233
R + KGN + SN + + +P+ DI +Y
Sbjct: 3410 PFAITIFEDTIYWTDWNTRTVEKGNKY--DGSNRQTLVNTTHRPF------DIHVYHPYR 3461
Query: 234 QT-GTNPCGVNNGGCAELCLY--NGVSAVCAC 262
Q +NPCG NNGGC+ LCL G C C
Sbjct: 3462 QPIVSNPCGTNNGGCSHLCLIKPGGKGFTCEC 3493
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
IAVDW+ ++IYWSD K IEVA+L G+YR LIS +DQP+A+AV+P+ G +FW++ GK
Sbjct: 4147 IAVDWVGRHIYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGK 4206
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLD-LKFFSAFYRNLSKGNIHIISL--SNLSD 209
P I A ++G+ + IL E + +++D L ++ + + I I ++
Sbjct: 4207 EPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRV 4266
Query: 210 VSTISMKPYGDSYLKD 225
++ +M PY +D
Sbjct: 4267 IAKEAMNPYSLDIFED 4282
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 359 EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYW 418
+G+A ++V ++YW+ + I LD + ++ L D+P I ++ ++W
Sbjct: 4145 DGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRKWLISTDL---DQPAAIAVNPKLGLMFW 4201
Query: 419 TNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH-QAEKLFWGDARLDKIERCDYD 477
T+W P I+ A+ +G ++ D+ P L++D+ ++++W D + D IE YD
Sbjct: 4202 TDWGKE-PKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYD 4260
Query: 478 GTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKY-TGEEVYTLRKNIRRPMGI 536
GT+R V++K ++P+ + ++ + ++W V + NK+ G++ TL N +
Sbjct: 4261 GTDRRVIAK-EAMNPYSLDIFEDQLYWISKEKGEVWKQNKFGQGKKEKTLVVNPW--LTQ 4317
Query: 537 VAISDNLDACAKTP--CRHLNGNCDDICKLDETGQVVCSCFTGKVLME 582
V I L P C+ + C +C L G C+C G +E
Sbjct: 4318 VRIFHQLRYNKSVPNLCKQI---CSHLCLL-RPGGYSCACPQGSSFIE 4361
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
+I V L+G Y+ ++S + L + ++IAV P G MFW++ K+ IE A+M+G
Sbjct: 4165 RIEVAKLDGRYRKWLISTD------LDQPAAIAVNPKLGLMFWTDWGKEP-KIESAWMNG 4217
Query: 72 TKRETVVSQK-KYPAVTACNLHIAVDWIAQN-IYWSDPKENVIEVARLTGQYRYVLISGG 129
R +V + +P +++D++ + IYWSD KE+VIE + G R V+
Sbjct: 4218 EDRNILVFEDLGWPT------GLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVIAKEA 4271
Query: 130 VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIK 178
++ P +L + + Y E G++ + G K++T++ + ++
Sbjct: 4272 MN-PYSLDIFEDQLYWISKEKGEVWKQNKFGQGKKEKTLVVNPWLTQVR 4319
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCS----CFTGKVLMEDNRSCTINTVCSE 595
SD L C + CR C D + Q +C+ C G +++R N C
Sbjct: 3542 SDELALCPQRFCRLGQFQCSD--GNCTSPQTLCNAHQNCPDGS---DEDRLLCENHHCDS 3596
Query: 596 HDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
++++C++ CIP + CD +C D SDE +CA R CRPG F+C N +CI
Sbjct: 3597 NEWQCANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCI 3648
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
C+E +F+C + CIP CD +C D SDE C MR C P YF+C + C+ S
Sbjct: 3759 CTESEFRCVNQQCIPSRWICDHYNDCGDNSDE--RDCEMRTCHPEYFQCTSGHCVHS 3813
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFK 640
++N++CT T CSE++F C G+CIP CDR +C D SDE G LY + C+ F
Sbjct: 2983 DENQNCTRRT-CSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLY---QTCQQNQFT 3038
Query: 641 CDNNKCI 647
C N +CI
Sbjct: 3039 CQNGRCI 3045
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD--CRPGYFK 640
D R C T C ++ F C +G CI CD +C D SDE + C + C P FK
Sbjct: 3023 DERGCLYQT-CQQNQFTCQNGRCISKTFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFK 3081
Query: 641 CDNNKCI 647
CDN +CI
Sbjct: 3082 CDNGRCI 3088
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFK 640
E+ CT +T CS +F+C+ G CIP + CD+ +C D SDE + R C FK
Sbjct: 2854 ENPTYCTTHT-CSSSEFQCASGRCIPQHWYCDQETDCFDASDEPASCGHSERTCLADEFK 2912
Query: 641 CDNNKCILS 649
CD +CI S
Sbjct: 2913 CDGGRCIPS 2921
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + C T DF+C + CIP CD +C D SDE CA R+C F+C
Sbjct: 3710 DEQGCEERTCHPVGDFRCKNHHCIPLRWQCDGQNDCGDNSDEE--NCAPRECTESEFRCV 3767
Query: 643 NNKCILS 649
N +CI S
Sbjct: 3768 NQQCIPS 3774
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN-NKCILSS 650
C F+C G CIP + CD +C D +DE + CA+ C+ GYFKC + +CI +S
Sbjct: 28 CDSAHFRCGSGHCIPADWRCDGTKDCSDDADE--IGCAVVTCQQGYFKCQSEGQCIPNS 84
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D R + CS H CS+G CIP CD V +C D +DE C C CD
Sbjct: 98 DERQDCSQSTCSSHQITCSNGQCIPSEYRCDHVRDCPDGADEND--CQYPTCE--QLTCD 153
Query: 643 NNKCILSSH 651
N C +S
Sbjct: 154 NGACYNTSQ 162
Score = 40.4 bits (93), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 414 SRIYWT--NWNSHLPSIQRAFFSGF--GTESIIT-TDITM-----PNALALDHQAEKLFW 463
S +Y+T S +I+RA+ F G +++ D+ + P+ +A+D ++W
Sbjct: 4099 SVVYYTVRGEGSRFGAIKRAYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYW 4158
Query: 464 GDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGE--FIFWTDWVIHAVLRANKYTGE 521
D + +IE DG R L P +AV + +FWTDW + + GE
Sbjct: 4159 SDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWMNGE 4218
Query: 522 EVYTLR-KNIRRPMGI 536
+ L +++ P G+
Sbjct: 4219 DRNILVFEDLGWPTGL 4234
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 588 TINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCR-PGYFKCDNN 644
T C H+FKC +G CI + C+ + +C D SDE C + +C P CD+N
Sbjct: 3070 TPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK--GCGINECHDPSISGCDHN 3125
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 592 VCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
+C +F+C DG+CIP CD +C SDE C + C YF CDN CI
Sbjct: 1229 MCHSDEFQCQEDGICIPNFWECDGHPDCLYGSDEHNA-CVPKTCPSSYFHCDNGNCI 1284
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
C+E+++KC +G CIP + CD +C D SDE
Sbjct: 3928 CTEYEYKCGNGHCIPHDNVCDDADDCGDWSDE 3959
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +CT +C ++F C +G CIP CD +C D SDE C C F C
Sbjct: 175 DEINCT--EICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHA--CNYPTCGGYQFTCP 230
Query: 643 NNKCI 647
+ +CI
Sbjct: 231 SGRCI 235
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 583 DNRSCTINTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D ++C T C KC + +CIP CD +C D SDE YC C F+C
Sbjct: 2813 DEKNCPDRT-CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQC 2871
Query: 642 DNNKCI 647
+ +CI
Sbjct: 2872 ASGRCI 2877
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD---CRPGYF 639
D R C + T C F+C+ G C+ CD +C D SDE D C+ F
Sbjct: 3789 DERDCEMRT-CHPEYFQCTSGHCVHSELKCDGSADCLDASDEADCPTRFPDGAYCQATMF 3847
Query: 640 KCDNNKCI 647
+C N+ CI
Sbjct: 3848 ECKNHVCI 3855
Score = 36.2 bits (82), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
ED+ C T C F+C++G CIP CD +C D SDE I C
Sbjct: 3625 EDSSHCASRT-CRPGQFRCANGRCIPQAWKCDVDNDCGDHSDEPIEEC 3671
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILY-CAMRDCRPGYFKCDNNK 645
C +FKC G CIP CD +C D SDE + C ++C F C N++
Sbjct: 2905 TCLADEFKCDGGRCIPSEWICDGDNDCGDMSDEDKRHQCQNQNCSDSEFLCVNDR 2959
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + + C + CI N CD +C D SDE + C+P F C N++CI
Sbjct: 1109 CLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCN-STETCQPSQFNCPNHRCI 1162
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 597 DFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP-GYFKCDNNKCI 647
+F C ++ CIP C+ V +C D SDE C R C P G F+C N+ CI
Sbjct: 3683 EFSCKTNYRCIPKWAVCNGVDDCRDNSDE--QGCEERTCHPVGDFRCKNHHCI 3733
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 577 GKVLMEDNRSCTINTVCSEHDFKC-----SDGMCIPFNQTCDRVYNCHDKSDEGILYCAM 631
G + ED R N CS+ +F C D CIP + CD +C D DE C
Sbjct: 2932 GDMSDEDKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCTDGYDEN-QNCTR 2990
Query: 632 RDCRPGYFKCDNNKCI 647
R C F C CI
Sbjct: 2991 RTCSENEFTCGYGLCI 3006
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 583 DNRSCTINTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D C +N C+ FKC+ G CI CD V++C D SDE C R PG
Sbjct: 1179 DEVGCVLN--CTASQFKCASGDKCIGVTNRCDGVFDCSDNSDEA--GCPTRP--PGMCHS 1232
Query: 642 DNNKC 646
D +C
Sbjct: 1233 DEFQC 1237
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC- 641
D ++C C F C + CI + CD +C D SDE + C + +C FKC
Sbjct: 1139 DEKNCNSTETCQPSQFNCPNHRCIDLSFVCDGDKDCVDGSDE--VGCVL-NCTASQFKCA 1195
Query: 642 DNNKCI 647
+KCI
Sbjct: 1196 SGDKCI 1201
>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus
GN=Lrp5 PE=1 SV=3
Length = 1614
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/646 (28%), Positives = 292/646 (45%), Gaps = 73/646 (11%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVS-QKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
++W++V+ + TI AFM+G+ E V+ YP +AVDW+ +N+YW+D N
Sbjct: 688 IYWTDVSLK--TISRAFMNGSSVEHVIEFGLDYPE------GMAVDWMGKNLYWADTGTN 739
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 170
IEVARL GQ+R VL+ +D P +LA+DP GY++W+E G P I RA +DG L
Sbjct: 740 RIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIVRAFMDGTNCMTLV 799
Query: 171 QEIIMPIKDITLDLKFFSAFYRNLSKG--------------------------------- 197
++ D+T+D ++ +L
Sbjct: 800 DKVGR-ANDLTIDYADQRLYWTDLDTNMIESSNMLGQERMVIADDLPYPFGLTQYSDYIY 858
Query: 198 ----NIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLY 253
N+H I ++ + ++ ++ DI ++ Q G N C +NG C +LCL
Sbjct: 859 WTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCVHSNGQCGQLCLA 918
Query: 254 NGVSAVCACA-HGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDK--SDLNSPFESIRNS 310
C CA H + ++CS F+++S+ I + D+ DL P +RN
Sbjct: 919 IPGGHRCGCASHYTLDPSSRNCSPPSTFLLFSQKFAISRMIPDDQLSPDLVLPLHGLRN- 977
Query: 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSV------EGLAYE 364
+ ++YD K +++ D ++ I +G+ +L S+ L+ +
Sbjct: 978 -----VKAINYDPLDKFIYWVDGRQ-NIKRAKDDGTQPSMLTSPSQSLSPDRQPHDLSID 1031
Query: 365 YVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH 424
L+WTC TIN LD + VV G DKPR I +++ +Y+TN H
Sbjct: 1032 IYSRTLFWTCEATNTINVHRLD---GDAMGVVLRGDRDKPRAIAVNAERGYMYFTNMQDH 1088
Query: 425 LPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL 484
I+RA G E + TT + P AL +D+ KLFW DA L +IE CD G NR+ L
Sbjct: 1089 AAKIERASLDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGANRLTL 1148
Query: 485 SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISD-NL 543
+ + P + V G ++W D + R K TG++ ++ + GI A+ + +L
Sbjct: 1149 EDANIVQPVGLTVLGRHLYWIDRQQQMIERVEKTTGDKRTRVQGRVTHLTGIHAVEEVSL 1208
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
+ + PC NG C IC G CSC VL+++ +C CS F C+ G
Sbjct: 1209 EEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFACTTG 1268
Query: 604 M--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
CIP CD C D+SDE C + C F C +C+
Sbjct: 1269 EIDCIPGAWRCDGFPECADQSDEE--GCPV--CSASQFPCARGQCV 1310
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/587 (26%), Positives = 278/587 (47%), Gaps = 71/587 (12%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
P++G ++W++ +V I A++DG+ +T+V+ + IAVDW+A+N+YW+D
Sbjct: 381 PLEGYVYWTD--DEVRAIRRAYLDGSGAQTLVNTEINDPDG-----IAVDWVARNLYWTD 433
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ IEV RL G R +L+S +D+P A+ + P G ++W++ G+ P I A LDG+ +
Sbjct: 434 TGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDR 493
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKP---YGDSYL 223
+L + + LDL+ ++ + I +I++ + + K +G + L
Sbjct: 494 HVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDKLPHIFGFTLL 553
Query: 224 KDIKIYSKDAQ-----------------------------------TGTNPCGVNNGGCA 248
D IY D Q GTNPC NGGC+
Sbjct: 554 GDF-IYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCADGNGGCS 612
Query: 249 ELCLYNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHM-TDKSDLNSPFES 306
LC + + C C G+ + D K+C +AF++++ I I + T+ +D+ P
Sbjct: 613 HLCFFTPRATKCGCPIGLELLSDMKTCIIPEAFLVFTSRATIHRISLETNNNDVAIPLTG 672
Query: 307 IRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGSVEGLAYEY 365
++ ++ L +D ++++D+ TI+ F NGS+ ++E EG+A ++
Sbjct: 673 VKEASA------LDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDW 726
Query: 366 VHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHL 425
+ LYW D N+I++ Q V+ D PR + +D IYWT W
Sbjct: 727 MGKNLYWA---DTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGK- 782
Query: 426 PSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLS 485
P I RAF G +++ + N L +D+ ++L+W D + IE + G R+V++
Sbjct: 783 PRIVRAFMDGTNCMTLVDK-VGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERMVIA 841
Query: 486 KISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAI----SD 541
P +PF + Y ++I+WTDW +H++ RA+K +G ++ ++ M I+ D
Sbjct: 842 DDLP-YPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQD 900
Query: 542 NLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
L+ C H NG C +C L G C C + L +R+C+
Sbjct: 901 GLNDCV-----HSNGQCGQLC-LAIPGGHRCGCASHYTLDPSSRNCS 941
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 270/590 (45%), Gaps = 70/590 (11%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDGT---KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWS 105
KG ++W++V+++ I+ +++ T + V+S P AC DW+ + +YW+
Sbjct: 73 KGAVYWTDVSEEA--IKQTYLNQTGAAAQNIVISGLVSPDGLAC------DWVGKKLYWT 124
Query: 106 DPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK 165
D + N IEVA L G R VL +DQP A+A+DP GY++W++ G+ P I RAG+DG
Sbjct: 125 DSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAPRIERAGMDGST 184
Query: 166 QTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNL--------SDVSTISMKP 217
+ I+ I +T+DL+ ++ + IH +L S ++
Sbjct: 185 RKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTL 244
Query: 218 YGDSYL------------------------------KDIKIYSKDAQTGTN-PCGVNNGG 246
GD+ DI++ S++ Q + PC +NGG
Sbjct: 245 SGDTLYWTDWQTRSIHACNKWTGEQRKEILSALYSPMDIQVLSQERQPPFHTPCEEDNGG 304
Query: 247 CAELCLYNGVSAV--CACAHGVVAQD-GKSC--SEYDAFIMYSRVN-RIDSIHMTDKSDL 300
C+ LCL + CAC GV QD GK+C + ++ R + R S+ D +D+
Sbjct: 305 CSHLCLLSPREPFYSCACPTGVQLQDNGKTCKTGAEEVLLLARRTDLRRISLDTPDFTDI 364
Query: 301 NSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVE 359
IR++ I + YD ++++D + I + +GS + L+ + +
Sbjct: 365 VLQVGDIRHA------IAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPD 418
Query: 360 GLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT 419
G+A ++V LYWT I L+ + +V L D+PR I + +YWT
Sbjct: 419 GIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL---DEPRAIVLHPVMGLMYWT 475
Query: 420 NWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGT 479
+W + P I+ A G ++ T + PN LALD Q KL+WGDA+ DKIE + DGT
Sbjct: 476 DWGEN-PKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGT 534
Query: 480 NRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAI 539
R L + H F + G+FI+WTDW ++ R +K + + + MG+ A+
Sbjct: 535 KRKTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQ-LPDLMGLKAV 593
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTI 589
+ PC NG C +C C C G L+ D ++C I
Sbjct: 594 -NVAKVVGTNPCADGNGGCSHLCFFTPRA-TKCGCPIGLELLSDMKTCII 641
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 146/288 (50%), Gaps = 8/288 (2%)
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFN---GSNHRVLLERQGSVEG 360
ES ++ +++ + + + + ++++D+ + I + N + +++ S +G
Sbjct: 52 LESTIVASGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDG 111
Query: 361 LAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTN 420
LA ++V LYWT D+ N+I++ + V+ D+PR I +D +YWT+
Sbjct: 112 LACDWVGKKLYWT---DSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTD 168
Query: 421 WNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
W P I+RA G + I+ +DI PN L +D + +KL+W DA+L I R + DG+
Sbjct: 169 WG-EAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSF 227
Query: 481 RIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAIS 540
R + + S HPF + + G+ ++WTDW ++ NK+TGE+ + + PM I +S
Sbjct: 228 RQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEQRKEILSALYSPMDIQVLS 287
Query: 541 DNLDACAKTPCRHLNGNCDDICKLDETGQVV-CSCFTGKVLMEDNRSC 587
TPC NG C +C L C+C TG L ++ ++C
Sbjct: 288 QERQPPFHTPCEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTC 335
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 60/266 (22%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V L+G+ +L + + K +IAV +G M+++N+ IE A +DGT
Sbjct: 1047 INVHRLDGDAMGVVLRGDRD------KPRAIAVNAERGYMYFTNMQDHAAKIERASLDGT 1100
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQ 132
+RE + + V + VD ++W D IE L+G R L + Q
Sbjct: 1101 EREVLFTTGLIRPVA-----LVVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQ 1155
Query: 133 PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR 192
P L V +L+W + Q++I ++ T D +
Sbjct: 1156 PVGLTV--LGRHLYWIDR-------------------QQQMIERVEKTTGDKR------- 1187
Query: 193 NLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCL 252
++ + L+ + V +S++ + +PC +NGGC+ +C+
Sbjct: 1188 --TRVQGRVTHLTGIHAVEEVSLEEF-----------------SAHPCARDNGGCSHICI 1228
Query: 253 YNG-VSAVCACA-HGVVAQDGKSCSE 276
G + C+C H V+ Q+ +C E
Sbjct: 1229 AKGDGTPRCSCPVHLVLLQNLLTCGE 1254
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 262 bits (670), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 188/646 (29%), Positives = 292/646 (45%), Gaps = 73/646 (11%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVS-QKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
++W++V+ + TI AFM+G+ E VV YP +AVDW+ +N+YW+D N
Sbjct: 689 IYWTDVSLK--TISRAFMNGSSVEHVVEFGLDYPE------GMAVDWMGKNLYWADTGTN 740
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 170
IEVARL GQ+R VL+ +D P +LA+DP GY++W+E G P I RA +DG L
Sbjct: 741 RIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIVRAFMDGTNCMTLV 800
Query: 171 QEIIMPIKDITLDLKFFSAFYRNLSKG--------------------------------- 197
++ D+T+D ++ +L
Sbjct: 801 DKVGR-ANDLTIDYADQRLYWTDLDTNMIESSNMLGQERVVIADDLPHPFGLTQYSDYIY 859
Query: 198 ----NIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLY 253
N+H I ++ + ++ ++ DI ++ Q G N C NNG C +LCL
Sbjct: 860 WTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCMHNNGQCGQLCLA 919
Query: 254 NGVSAVCACA-HGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDK--SDLNSPFESIRNS 310
C CA H + ++CS F+++S+ + I + D+ DL P +RN
Sbjct: 920 IPGGHRCGCASHYTLDPSSRNCSPPTTFLLFSQKSAISRMIPDDQHSPDLILPLHGLRN- 978
Query: 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGS-----VEGLAYE 364
+ + YD K +++ D ++ I +G+ VL QG L+ +
Sbjct: 979 -----VKAIDYDPLDKFIYWVDGRQ-NIKRAKDDGTQPFVLTSLSQGQNPDRQPHDLSID 1032
Query: 365 YVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH 424
L+WTC TIN L + + VV G DKPR I +++ +Y+TN
Sbjct: 1033 IYSRTLFWTCEATNTINVHRL---SGEAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQDR 1089
Query: 425 LPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL 484
I+RA G E + TT + P AL +D+ KLFW DA L +IE CD G NR+ L
Sbjct: 1090 AAKIERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCDLSGANRLTL 1149
Query: 485 SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISD-NL 543
+ + P + + G+ ++W D + R K TG++ ++ + GI A+ + +L
Sbjct: 1150 EDANIVQPLGLTILGKHLYWIDRQQQMIERVEKTTGDKRTRIQGRVAHLTGIHAVEEVSL 1209
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
+ + PC NG C IC G CSC VL+++ +C CS F C+ G
Sbjct: 1210 EEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFACATG 1269
Query: 604 M--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
CIP CD C D+SDE C + C F C +C+
Sbjct: 1270 EIDCIPGAWRCDGFPECDDQSDEE--GCPV--CSAAQFPCARGQCV 1311
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 165/606 (27%), Positives = 286/606 (47%), Gaps = 65/606 (10%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
P++G ++W++ +V I A++DG+ +T+V+ + IAVDW+A+N+YW+D
Sbjct: 382 PLEGYVYWTD--DEVRAIRRAYLDGSGAQTLVNTEINDPDG-----IAVDWVARNLYWTD 434
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ IEV RL G R +L+S +D+P A+A+ P G ++W++ G+ P I A LDG+++
Sbjct: 435 TGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGENPKIECANLDGQER 494
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKP---YGDSYL 223
+L + + LDL+ ++ + I +I++ + + K +G + L
Sbjct: 495 RVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLL 554
Query: 224 KDIKIYSKDAQ-----------------------------------TGTNPCGVNNGGCA 248
D IY D Q GTNPC NGGC+
Sbjct: 555 GDF-IYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCADRNGGCS 613
Query: 249 ELCLYNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHM-TDKSDLNSPFES 306
LC + + C C G+ + D K+C +AF++++ I I + T+ +D+ P
Sbjct: 614 HLCFFTPHATRCGCPIGLELLSDMKTCIVPEAFLVFTSRAAIHRISLETNNNDVAIPLTG 673
Query: 307 IRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGSVEGLAYEY 365
++ ++ L +D ++++D+ TI+ F NGS+ ++E EG+A ++
Sbjct: 674 VKEASA------LDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVEFGLDYPEGMAVDW 727
Query: 366 VHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHL 425
+ LYW D N+I++ Q V+ D PR + +D IYWT W
Sbjct: 728 MGKNLYWA---DTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGK- 783
Query: 426 PSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLS 485
P I RAF G +++ + N L +D+ ++L+W D + IE + G R+V++
Sbjct: 784 PRIVRAFMDGTNCMTLVDK-VGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERVVIA 842
Query: 486 KISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAI-SDNLD 544
P HPF + Y ++I+WTDW +H++ RA+K +G ++ ++ M I+ S D
Sbjct: 843 DDLP-HPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQD 901
Query: 545 ACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGM 604
C H NG C +C L G C C + L +R+C+ T K +
Sbjct: 902 GLND--CMHNNGQCGQLC-LAIPGGHRCGCASHYTLDPSSRNCSPPTTFLLFSQKSAISR 958
Query: 605 CIPFNQ 610
IP +Q
Sbjct: 959 MIPDDQ 964
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 269/590 (45%), Gaps = 70/590 (11%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDGTK---RETVVSQKKYPAVTACNLHIAVDWIAQNIYWS 105
KG ++W++V+++ I+ +++ T + V+S P AC DW+ + +YW+
Sbjct: 74 KGAVYWTDVSEEA--IKQTYLNQTGAAVQNVVISGLVSPDGLAC------DWVGKKLYWT 125
Query: 106 DPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK 165
D + N IEVA L G R VL +DQP A+A+DP GY++W++ G+ P I RAG+DG
Sbjct: 126 DSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDGST 185
Query: 166 QTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNL--------SDVSTISMKP 217
+ I+ I +T+DL+ ++ + IH +L S ++
Sbjct: 186 RKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTL 245
Query: 218 YGDSYL------------------------------KDIKIYSKDAQTGTNP-CGVNNGG 246
GD+ DI++ S++ Q + C +NGG
Sbjct: 246 SGDTLYWTDWQTRSIHACNKRTGGKRKEILSALYSPMDIQVLSQERQPFFHTRCEEDNGG 305
Query: 247 CAELCLYNGVSA--VCACAHGVVAQD-GKSC--SEYDAFIMYSRVN-RIDSIHMTDKSDL 300
C+ LCL + CAC GV QD G++C + ++ R + R S+ D +D+
Sbjct: 306 CSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTPDFTDI 365
Query: 301 NSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVE 359
+ IR++ I + YD ++++D + I + +GS + L+ + +
Sbjct: 366 VLQVDDIRHA------IAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPD 419
Query: 360 GLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT 419
G+A ++V LYWT I L+ + +V L D+PR I + +YWT
Sbjct: 420 GIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL---DEPRAIALHPVMGLMYWT 476
Query: 420 NWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGT 479
+W + P I+ A G ++ + PN LALD Q KL+WGDA+ DKIE + DGT
Sbjct: 477 DWGEN-PKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGT 535
Query: 480 NRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAI 539
R L + H F + G+FI+WTDW ++ R +K + + + MG+ A+
Sbjct: 536 KRRTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQ-LPDLMGLKAV 594
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTI 589
+ PC NG C +C C C G L+ D ++C +
Sbjct: 595 -NVAKVVGTNPCADRNGGCSHLCFFTPHA-TRCGCPIGLELLSDMKTCIV 642
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 8/288 (2%)
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN---HRVLLERQGSVEG 360
ES + +++ + + + + ++++D+ + I + N + V++ S +G
Sbjct: 53 LESTIVVSGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDG 112
Query: 361 LAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTN 420
LA ++V LYWT D+ N+I++ + V+ D+PR I +D +YWT+
Sbjct: 113 LACDWVGKKLYWT---DSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTD 169
Query: 421 WNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480
W P I+RA G + I+ +DI PN L +D + +KL+W DA+L I R + DG+
Sbjct: 170 WG-ETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSF 228
Query: 481 RIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAIS 540
R + + S HPF + + G+ ++WTDW ++ NK TG + + + PM I +S
Sbjct: 229 RQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKRTGGKRKEILSALYSPMDIQVLS 288
Query: 541 DNLDACAKTPCRHLNGNCDDICKLDETGQV-VCSCFTGKVLMEDNRSC 587
T C NG C +C L + C+C TG L ++ R+C
Sbjct: 289 QERQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTC 336
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 105/266 (39%), Gaps = 60/266 (22%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V L GE +L + + K +I V +G ++++N+ + IE A +DGT
Sbjct: 1048 INVHRLSGEAMGVVLRGDRD------KPRAIVVNAERGYLYFTNMQDRAAKIERAALDGT 1101
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQ 132
+RE + + V + VD ++W D IE L+G R L + Q
Sbjct: 1102 EREVLFTTGLIRPVA-----LVVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQ 1156
Query: 133 PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR 192
P L + +L+W + Q++I ++ T D +
Sbjct: 1157 PLGLTI--LGKHLYWIDR-------------------QQQMIERVEKTTGDKR------- 1188
Query: 193 NLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCL 252
++ + L+ + V +S++ + +PC +NGGC+ +C+
Sbjct: 1189 --TRIQGRVAHLTGIHAVEEVSLEEF-----------------SAHPCARDNGGCSHICI 1229
Query: 253 YNG-VSAVCAC-AHGVVAQDGKSCSE 276
G + C+C H V+ Q+ +C E
Sbjct: 1230 AKGDGTPRCSCPVHLVLLQNLLTCGE 1255
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 283/587 (48%), Gaps = 74/587 (12%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
+FWS+VT + I A ++G+ E VVS + P +AVDW+ +YW+D +
Sbjct: 482 VFWSDVT--LDRILRANLNGSNVEEVVSTGLESPG------GLAVDWVHDKLYWTDSGTS 533
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 170
IEVA L G +R VL+ +++P A+A+ P G ++W++ G P I + +DG + I+A
Sbjct: 534 RIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 593
Query: 171 QEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSD------VSTISMKPYGDSYLK 224
+ +T+D ++ + H+I +NL +S P+ + +
Sbjct: 594 DTHLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGSHRKAVISQGLPHPFAITVFE 650
Query: 225 DIKIYSKDAQT-------------------------------------GTNPCGVNNGGC 247
D +Y D T G N CG NNGGC
Sbjct: 651 D-SLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGC 709
Query: 248 AELCLYNGVSAVCACAHGVVAQDGKSCSE-YDAFIMYSR---VNRIDSIHMTDKSDLNSP 303
LCL +G + CAC G +C++ D F++++R + RI S D SD P
Sbjct: 710 THLCLPSGQNYTCACPTGFRKISSHACAQSLDKFLLFARRMDIRRI-SFDTEDLSDDVIP 768
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLA 362
+R++ + L +D + ++++D+ TI+ ++G+ V+++ S GLA
Sbjct: 769 LADVRSA------VALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLA 822
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
++V N LYWT DA ++I++ + V+ D+PR I ++ +YWT+W
Sbjct: 823 IDWVTNKLYWT---DAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWG 879
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRI 482
+ P I+RA G + II++++T PN LA+D+ +++L+W DA + IE DG+ R
Sbjct: 880 AS-PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRK 938
Query: 483 VLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDN 542
VL HPF + +YGE I+WTDW ++ A++ TG + TL++N+ M I
Sbjct: 939 VLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRR 998
Query: 543 LDACAKTPCRHLNGNCDDIC-KLDETGQVVCSCFTGKVLMEDNRSCT 588
TPC NG C +C + C+C TG L+ D ++C+
Sbjct: 999 RPP-VSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS 1044
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 168/597 (28%), Positives = 274/597 (45%), Gaps = 68/597 (11%)
Query: 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAV 95
T+ +I V P +GK++WS+ T + I A +DG++ E +++ +AV
Sbjct: 1079 TMKNTIAIGVDPQEGKVYWSDST--LHRISRANLDGSQHEDIITTGLQTTDG-----LAV 1131
Query: 96 DWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 155
D I + +YW+D N IEV L G R VL+ +D P A+ + E G+++W++ G+
Sbjct: 1132 DAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAK 1191
Query: 156 IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTIS- 214
+ R+G+DG + +L + +T+D + + I L+ + + +S
Sbjct: 1192 LERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVSP 1251
Query: 215 -MKPYG----DSY-------------------------------LKDIKIYSKDAQTGTN 238
PYG DSY L D++ + G N
Sbjct: 1252 VQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNLPGLMDMQAVDRAQPLGFN 1311
Query: 239 PCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEY-DAFIMYSRVNRIDSIHM-- 294
CG NGGC+ LCL CAC G+ + DGK+C + ++++S I I +
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 295 TDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER 354
+D +D++ P + N+I L YD ++Y+D+ I NGSN ++ R
Sbjct: 1372 SDHTDVHVPVPE------LNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGR 1425
Query: 355 Q-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
+ +GLA ++V LYWT TI LD + ++ L D+PR I +
Sbjct: 1426 GLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSL---DEPRAIAVFPRK 1482
Query: 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIER 473
++WT+W H+ I+RA G + +I TD+ PN L LD+ +++W DA LD+IE
Sbjct: 1483 GYLFWTDW-GHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIES 1541
Query: 474 CDYDGTNRIVL-SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532
D +G R VL S +S HPF + +I+WTDW ++ R +KY+G T+ N+
Sbjct: 1542 ADLNGKLRQVLVSHVS--HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEG 1599
Query: 533 PMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTI 589
M I+ +S C NG C +C VC+C D+R C++
Sbjct: 1600 LMDIIVVSPQRQT-GTNACGVNNGGCTHLC-FARASDFVCACPD----EPDSRPCSL 1650
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 171/381 (44%), Gaps = 42/381 (11%)
Query: 234 QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYD-------------- 278
+TG C VNNGGCA+ C + C C G + +DG +C + +
Sbjct: 352 RTGEENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTN 411
Query: 279 ---AFIMYSRVN---RIDS-----------IHMTDKSDLNSPFESIRNSTMM----KNII 317
AF + R D + ++ D+ T++ +N I
Sbjct: 412 SEGAFQCWCETGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAI 471
Query: 318 ELSYDYKRKTLFYSDIQKGTINSVFFNGSN-HRVLLERQGSVEGLAYEYVHNYLYWTCNN 376
L + ++R+ +F+SD+ I NGSN V+ S GLA ++VH+ LYWT +
Sbjct: 472 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG 531
Query: 377 DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF 436
+ I +LD + ++ L +KPR I + + IYWT+W + P I+ + G
Sbjct: 532 TSRIEVANLDGAHRKVLLWQNL---EKPRAIALHPMEGTIYWTDW-GNTPRIEASSMDGS 587
Query: 437 GTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMA 496
G I T + PN L +D+ +++W DA+ IER + DG++R + HPF +
Sbjct: 588 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT 647
Query: 497 VYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNG 556
V+ + ++WTDW ++ ANK+TG+ +R + PM I + K C NG
Sbjct: 648 VFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNG 707
Query: 557 NCDDICKLDETGQVVCSCFTG 577
C +C L C+C TG
Sbjct: 708 GCTHLC-LPSGQNYTCACPTG 727
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 75/306 (24%)
Query: 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFM 69
++ I L+G + +++N +L + +IAV+P KG +FW++ + IE A +
Sbjct: 1449 RNTIEASRLDGSCRKVLINN------SLDEPRAIAVFPRKGYLFWTDW-GHIAKIERANL 1501
Query: 70 DGTKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG 128
DG++R+ +++ +P + +D+ + IYW D + IE A L G+ R VL+S
Sbjct: 1502 DGSERKVLINTDLGWPN------GLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVS- 1554
Query: 129 GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK-KQTILAQEIIMPIKDITLDLKFF 187
V P AL + +++W++ + G+ K+T+LA
Sbjct: 1555 HVSHPFALT--QQDRWIYWTDWQTKSIQRVDKYSGRNKETVLA----------------- 1595
Query: 188 SAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGC 247
N+ L DI + S QTGTN CGVNNGGC
Sbjct: 1596 ----------NVE---------------------GLMDIIVVSPQRQTGTNACGVNNGGC 1624
Query: 248 AELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDL--NSPFE 305
LC VCAC D + CS + + + M++KS + N+P
Sbjct: 1625 THLCFARASDFVCACPD---EPDSRPCSLVPGLVPPA----PRATGMSEKSPVLPNTPPT 1677
Query: 306 SIRNST 311
++ +ST
Sbjct: 1678 TLYSST 1683
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C + T CS DF C +G CI + CD +C D SDE C R+C F C
Sbjct: 62 DEDGCILPT-CSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDE--QDCPPRECEEDEFPCQ 118
Query: 643 NNKCILS 649
N CI S
Sbjct: 119 NGYCIRS 125
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C E +F C +G CI CD +C D SDE C MR C F+C + CI
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDE---QCDMRKCSDKEFRCSDGSCI 161
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C+ + C +F C G+CI CD +C D+SDE C C F+C
Sbjct: 221 DESDCSSHQPCRSGEFMCDSGLCINAGWRCDGDADCDDQSDE--RNCTTSMCTAEQFRCH 278
Query: 643 NNKCI 647
+ +C+
Sbjct: 279 SGRCV 283
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAM--RDCRPGYFKCDNNKCIL 648
CS+ +F+CSDG CI + CD +C D SDE A+ C F+C +CIL
Sbjct: 148 CSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLEEFQCAYGRCIL 205
Score = 40.0 bits (92), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFK 599
SD D + PCR CD ++ + C D R+CT ++C+ F+
Sbjct: 220 SDESDCSSHQPCRSGEFMCDSGLCINAGWR--CDGDADCDDQSDERNCTT-SMCTAEQFR 276
Query: 600 CSDGMCIPFNQTCDRVYNCHDKSDE------GILYCAMRDCRPGYFKCDNNKCI 647
C G C+ + CD +C D SDE G CA+ F C N +CI
Sbjct: 277 CHSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCAL-----DQFLCWNGRCI 325
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 592 VCSEHDFKCS-----DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
C F C+ + CIP CD +C D SDE C + C P F CDN KC
Sbjct: 26 ACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDED--GCILPTCSPLDFHCDNGKC 83
Query: 647 ILSS 650
I S
Sbjct: 84 IRRS 87
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Query: 535 GIVAISDNLDACAKTPCRHL---------NGNCDDICKLDETGQVVCSCFTGKVLMEDNR 585
G+ DN D + CR NG C C++ G V C+C TG L ED
Sbjct: 333 GVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQM-VRGAVQCTCHTGYRLTEDGH 391
Query: 586 SCTINTVCSEHDFKCSDG 603
+C C+E + CS G
Sbjct: 392 TCQDVNECAEEGY-CSQG 408
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
E+N T + C+ F C +G CI + C+ V +C D SDE ++CRP
Sbjct: 301 EENCENTGSPQCALDQFLCWNGRCIGQRKLCNGVNDCGDNSDES----PQQNCRP 351
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 284/587 (48%), Gaps = 74/587 (12%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
+FWS+VT + I A ++G+ E VVS + P +AVDW+ +YW+D +
Sbjct: 482 VFWSDVT--LDRILRANLNGSNVEEVVSTGLESPG------GLAVDWVHDKLYWTDSGTS 533
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 170
IEVA L G +R VL+ +++P A+A+ P G ++W++ G P I + +DG + I+A
Sbjct: 534 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 593
Query: 171 QEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSD------VSTISMKPYGDSYLK 224
+ +T+D ++ + H+I +NL +S P+ + +
Sbjct: 594 DTHLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGSHRKAVISQGLPHPFAITVFE 650
Query: 225 DIKIYSKDAQT-------------------------------------GTNPCGVNNGGC 247
D +Y D T G N CG NNGGC
Sbjct: 651 D-SLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGC 709
Query: 248 AELCLYNGVSAVCACAHGVVAQDGKSCSE-YDAFIMYSR---VNRIDSIHMTDKSDLNSP 303
LCL +G + CAC G + +C++ D F++++R + RI S D SD P
Sbjct: 710 THLCLPSGQNYTCACPTGFRKINSHACAQSLDKFLLFARRMDIRRI-SFDTEDLSDDVIP 768
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLA 362
+R++ + L +D + ++++D+ TI+ ++G+ +V+++ S GLA
Sbjct: 769 LADVRSA------VALDWDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLA 822
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
++V N LYWT DA ++I++ + V+ D+PR I ++ +YWT+W
Sbjct: 823 IDWVTNKLYWT---DAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWG 879
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRI 482
+ P I+RA + II++++T PN LA+D+ +++L+W DA + IE DG+ R
Sbjct: 880 AS-PKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRK 938
Query: 483 VLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDN 542
VL HPF + +YG+ I+WTDW ++ A++ TG + TL++N+ M I
Sbjct: 939 VLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRQ 998
Query: 543 LDACAKTPCRHLNGNCDDIC-KLDETGQVVCSCFTGKVLMEDNRSCT 588
TPC NG C +C + C+C TG L+ D ++C+
Sbjct: 999 RPP-VTTPCAVENGGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCS 1044
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 268/582 (46%), Gaps = 64/582 (10%)
Query: 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAV 95
T+ +I V P++GK++WS+ T + I A +DG++ E +++ +AV
Sbjct: 1079 TMKNTIAIGVDPLEGKVYWSDST--LHRISRASLDGSQHEDIITTGLQTTDG-----LAV 1131
Query: 96 DWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 155
D I + +YW+D N IEV L G R VL+ +D P A+ + E G+++W++ G+
Sbjct: 1132 DAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAK 1191
Query: 156 IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTIS- 214
+ R+G+DG +T+L + +T+D + + I + L+ + + +S
Sbjct: 1192 LERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVSP 1251
Query: 215 -MKPYG----DSY-------------------------------LKDIKIYSKDAQTGTN 238
PYG DSY L DI+ + G N
Sbjct: 1252 VQHPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFN 1311
Query: 239 PCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEY-DAFIMYSRVNRIDSIHM-- 294
CG NGGC+ LCL CAC G+ + DGK+C + ++++S I I +
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 295 TDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER 354
D +D++ P + N+I L YD ++Y+D+ I NGSN ++
Sbjct: 1372 DDHTDVHVPVPG------LNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGH 1425
Query: 355 Q-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
+ +GLA ++V LYWT TI LD + ++ L D+PR I +
Sbjct: 1426 GLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSL---DEPRAIAVFPRK 1482
Query: 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIER 473
++WT+W H+ I+RA G + +I D+ PN L LD+ +++W DA LD+IE
Sbjct: 1483 GYLFWTDW-GHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLDRIES 1541
Query: 474 CDYDGTNRIVL-SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532
D +G R VL S +S HPF + +I+WTDW ++ R +KY+G T+ N+
Sbjct: 1542 ADLNGKLRQVLVSHVS--HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEG 1599
Query: 533 PMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSC 574
M I+ +S C NG C +C VC+C
Sbjct: 1600 LMDIIVVSPQRQT-GTNACGVNNGGCSHLC-FARASDFVCAC 1639
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 42/381 (11%)
Query: 234 QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYD-------------- 278
+TG C VNNGGCA+ C + C C G + +DG++C + +
Sbjct: 352 RTGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTN 411
Query: 279 ---AFIMYSRVN---RIDS-----------IHMTDKSDLNSPFESIRNSTMM----KNII 317
AF + R D + ++ D+ T++ +N I
Sbjct: 412 SEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAI 471
Query: 318 ELSYDYKRKTLFYSDIQKGTINSVFFNGSN-HRVLLERQGSVEGLAYEYVHNYLYWTCNN 376
L + ++R+ +F+SD+ I NGSN V+ S GLA ++VH+ LYWT +
Sbjct: 472 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG 531
Query: 377 DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF 436
+ I +LD + ++ L +KPR I + + IYWT+W + P I+ + G
Sbjct: 532 TSRIEVANLDGAHRKVLLWQSL---EKPRAIALHPMEGTIYWTDW-GNTPRIEASSMDGS 587
Query: 437 GTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMA 496
G I T + PN L +D+ +++W DA+ IER + DG++R + HPF +
Sbjct: 588 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT 647
Query: 497 VYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNG 556
V+ + ++WTDW ++ ANK+TG+ +R + PM I + K C NG
Sbjct: 648 VFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNG 707
Query: 557 NCDDICKLDETGQVVCSCFTG 577
C +C L C+C TG
Sbjct: 708 GCTHLC-LPSGQNYTCACPTG 727
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 66/255 (25%)
Query: 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFM 69
++ I L+G + +++N +L + +IAV+P KG +FW++ + IE A +
Sbjct: 1449 RNTIEASRLDGSCRKVLINN------SLDEPRAIAVFPRKGYLFWTDW-GHIAKIERANL 1501
Query: 70 DGTKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG 128
DG++R+ +++ +P + +D+ + IYW D + IE A L G+ R VL+S
Sbjct: 1502 DGSERKVLINADLGWPN------GLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVS- 1554
Query: 129 GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK-KQTILAQEIIMPIKDITLDLKFF 187
V P AL + +++W++ + G+ K+T+LA
Sbjct: 1555 HVSHPFALT--QQDRWIYWTDWQTKSIQRVDKYSGRNKETVLA----------------- 1595
Query: 188 SAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGC 247
N+ L DI + S QTGTN CGVNNGGC
Sbjct: 1596 ----------NVE---------------------GLMDIIVVSPQRQTGTNACGVNNGGC 1624
Query: 248 AELCLYNGVSAVCAC 262
+ LC VCAC
Sbjct: 1625 SHLCFARASDFVCAC 1639
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D CT+ T CS DF C +G CI + CD +C D SDE C R+C F C
Sbjct: 62 DEDGCTLPT-CSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDE--QDCPPRECEEDEFPCQ 118
Query: 643 NNKCILS 649
N CI S
Sbjct: 119 NGYCIRS 125
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C E +F C +G CI CD +C D SDE C MR C F+C + CI
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDE---QCDMRKCSDKEFRCSDGSCI 161
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD--CRPGYFKCDNNKCIL 648
CS+ +F+CSDG CI + CD +C D SDE A+ C F+C +CIL
Sbjct: 148 CSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLEEFQCAYGRCIL 205
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 589 INTVCSEHDFKCS-----DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN 643
+ C F C+ + CIP CD +C D SDE C + C P F CDN
Sbjct: 23 LECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDED--GCTLPTCSPLDFHCDN 80
Query: 644 NKCILSS 650
KCI S
Sbjct: 81 GKCIRRS 87
Score = 40.4 bits (93), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C+ + C +F C G+C+ CD +C D+SDE C C F+C
Sbjct: 221 DESDCSSHQPCRSGEFMCDSGLCVNAGWRCDGDADCDDQSDE--RNCTTSMCTAEQFRCR 278
Query: 643 NNKCI 647
+ +C+
Sbjct: 279 SGRCV 283
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFK 599
SD D + PCR CD L C D R+CT ++C+ F+
Sbjct: 220 SDESDCSSHQPCRSGEFMCDS--GLCVNAGWRCDGDADCDDQSDERNCTT-SMCTAEQFR 276
Query: 600 CSDGMCIPFNQTCDRVYNCHDKSD-EGILYCAMRDCRPGYFKCDNNKCI 647
C G C+ + CD +C D SD E C F C N +CI
Sbjct: 277 CRSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCASDQFLCWNGRCI 325
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 535 GIVAISDNLDACAKTPCRHL---------NGNCDDICKLDETGQVVCSCFTGKVLMEDNR 585
G+ DN D + CR NG C C++ G V C+C TG L ED R
Sbjct: 333 GVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMIR-GAVQCTCHTGYRLTEDGR 391
Query: 586 SCTINTVCSEHDFKCSDG 603
+C C+E + CS G
Sbjct: 392 TCQDVNECAEEGY-CSQG 408
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
E+N T + C+ F C +G CI + C+ V +C D SDE ++CRP
Sbjct: 301 EENCENTGSPQCASDQFLCWNGRCIGQRKLCNGVNDCGDNSDES----PQQNCRP 351
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 282/587 (48%), Gaps = 74/587 (12%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
+FWS+VT + I A ++G+ E VVS + P +AVDW+ +YW+D +
Sbjct: 482 VFWSDVT--LDRILRANLNGSNVEEVVSTGLESPG------GLAVDWVHDKLYWTDSGTS 533
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 170
IEVA L G +R VL+ +++P A+A+ P G ++W++ G P I + +DG + I+A
Sbjct: 534 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 593
Query: 171 QEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSD------VSTISMKPYGDSYLK 224
+ +T+D ++ + H+I +NL +S P+ + +
Sbjct: 594 DTHLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGSHRKAVISQGLPHPFAITVFE 650
Query: 225 DIKIYSKDAQT-------------------------------------GTNPCGVNNGGC 247
D +Y D T G N CG NNGGC
Sbjct: 651 D-SLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGC 709
Query: 248 AELCLYNGVSAVCACAHGVVAQDGKSCSE-YDAFIMYSR---VNRIDSIHMTDKSDLNSP 303
LCL +G + CAC G + +C++ D F++++R + RI S D SD P
Sbjct: 710 THLCLPSGQNYTCACPTGFRKINSHACAQSLDKFLLFARRMDIRRI-SFDTEDLSDDVIP 768
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLA 362
+R++ + L +D + ++++D+ TI+ ++G+ V+++ S GLA
Sbjct: 769 LADVRSA------VALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLA 822
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
++V N LYWT DA ++I++ + V+ D+PR I ++ +YWT+W
Sbjct: 823 IDWVTNKLYWT---DAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWG 879
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRI 482
+ P I+RA + II++++T PN LA+D+ +++L+W DA + IE DG+ R
Sbjct: 880 AS-PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRK 938
Query: 483 VLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDN 542
VL HPF + +YG+ I+WTDW ++ A++ TG + TL++N+ M I
Sbjct: 939 VLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRQ 998
Query: 543 LDACAKTPCRHLNGNCDDIC-KLDETGQVVCSCFTGKVLMEDNRSCT 588
T C NG C +C + C+C TG L+ D ++C+
Sbjct: 999 RPP-VTTLCAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCS 1044
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 268/582 (46%), Gaps = 64/582 (10%)
Query: 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAV 95
T+ +I V P++GK++WS+ T + I A +DG++ E +++ +AV
Sbjct: 1079 TMKNTIAIGVDPLEGKVYWSDST--LHRISRASLDGSQHEDIITTGLQTTDG-----LAV 1131
Query: 96 DWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 155
D I + +YW+D N IEV L G R VL+ +D P A+ + E G+++W++ G+
Sbjct: 1132 DAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAK 1191
Query: 156 IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTIS- 214
+ R+G+DG +T+L + +T+D + + I + L+ + + +S
Sbjct: 1192 LERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVSP 1251
Query: 215 -MKPYG----DSY-------------------------------LKDIKIYSKDAQTGTN 238
PYG DSY L DI+ + G N
Sbjct: 1252 VQHPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFN 1311
Query: 239 PCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEY-DAFIMYSRVNRIDSIHM-- 294
CG NGGC+ LCL CAC G+ + D K+C + ++++S I I +
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 295 TDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER 354
D +D++ P + N+I L YD ++Y+D+ I NGSN ++
Sbjct: 1372 DDHTDVHVPVPG------LNNVISLDYDSVHGKVYYTDVFLDVIRRADLNGSNMETVIGH 1425
Query: 355 Q-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
+ +GLA ++V LYWT TI LD + ++ L D+PR I +
Sbjct: 1426 GLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSL---DEPRAIAVFPRK 1482
Query: 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIER 473
++WT+W H+ I+RA G + +I TD+ PN L LD+ +++W DA LD+IE
Sbjct: 1483 GYLFWTDW-GHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIES 1541
Query: 474 CDYDGTNRIVL-SKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532
D +G R VL S +S HPF + +I+WTDW ++ R +KY+G T+ N+
Sbjct: 1542 ADLNGKLRQVLVSHVS--HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEG 1599
Query: 533 PMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSC 574
M I+ +S C NG C +C VC+C
Sbjct: 1600 LMDIIVVSPQRQT-GTNACGVNNGGCTHLC-FARASDFVCAC 1639
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 42/381 (11%)
Query: 234 QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYD-------------- 278
+TG C VNNGGCA+ C + C C G + +DG++C + +
Sbjct: 352 RTGEENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTN 411
Query: 279 ---AFIMYSRVN---RIDS-----------IHMTDKSDLNSPFESIRNSTMM----KNII 317
AF + R D + ++ D+ T++ +N I
Sbjct: 412 TEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAI 471
Query: 318 ELSYDYKRKTLFYSDIQKGTINSVFFNGSN-HRVLLERQGSVEGLAYEYVHNYLYWTCNN 376
L + ++R+ +F+SD+ I NGSN V+ S GLA ++VH+ LYWT +
Sbjct: 472 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG 531
Query: 377 DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF 436
+ I +LD + ++ L +KPR I + + IYWT+W + P I+ + G
Sbjct: 532 TSRIEVANLDGAHRKVLLWQSL---EKPRAIALHPMEGTIYWTDW-GNTPRIEASSMDGS 587
Query: 437 GTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMA 496
G I T + PN L +D+ +++W DA+ IER + DG++R + HPF +
Sbjct: 588 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT 647
Query: 497 VYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNG 556
V+ + ++WTDW ++ ANK+TG+ +R + PM I + K C NG
Sbjct: 648 VFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNG 707
Query: 557 NCDDICKLDETGQVVCSCFTG 577
C +C L C+C TG
Sbjct: 708 GCTHLC-LPSGQNYTCACPTG 727
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 69/268 (25%)
Query: 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFM 69
++ I L+G + +++N +L + +IAV+P KG +FW++ + IE A +
Sbjct: 1449 RNTIEASRLDGSCRKVLINN------SLDEPRAIAVFPRKGYLFWTDW-GHIAKIERANL 1501
Query: 70 DGTKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG 128
DG++R+ +++ +P + +D+ + IYW D + IE A L G+ R VL+S
Sbjct: 1502 DGSERKVLINTDLGWPN------GLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVS- 1554
Query: 129 GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK-KQTILAQEIIMPIKDITLDLKFF 187
V P AL + +++W++ + G+ K+T+LA
Sbjct: 1555 HVSHPFALT--QQDRWIYWTDWQTKSIQRVDKYSGRNKETVLA----------------- 1595
Query: 188 SAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGC 247
N+ L DI + S QTGTN CGVNNGGC
Sbjct: 1596 ----------NVE---------------------GLMDIIVVSPQRQTGTNACGVNNGGC 1624
Query: 248 AELCLYNGVSAVCACAHGVVAQDGKSCS 275
LC VCAC DG CS
Sbjct: 1625 THLCFARASDFVCACPD---EPDGHPCS 1649
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D CT+ T CS DF C +G CI + CD +C D SDE C R+C F C
Sbjct: 62 DEDGCTLPT-CSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDE--QDCPPRECEEDEFPCQ 118
Query: 643 NNKCILS 649
N CI S
Sbjct: 119 NGYCIRS 125
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C E +F C +G CI CD +C D SDE C MR C F+C + CI
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDE---QCDMRKCSDKEFRCSDGSCI 161
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD--CRPGYFKCDNNKCIL 648
CS+ +F+CSDG CI + CD +C D SDE A+ C F+C +CIL
Sbjct: 148 CSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLEEFQCAYGRCIL 205
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 588 TINTVCSEHDFKCS-----DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
++ C F C+ + CIP CD +C D SDE C + C P F CD
Sbjct: 22 SLECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDED--GCTLPTCSPLDFHCD 79
Query: 643 NNKCILSS 650
N KCI S
Sbjct: 80 NGKCIRRS 87
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C+ + C +F C G+CI CD +C D+SDE C C F+C
Sbjct: 221 DESDCSSHQPCRSGEFMCDSGLCINSGWRCDGDADCDDQSDE--RNCTTSMCTAEQFRCR 278
Query: 643 NNKCI 647
+ +C+
Sbjct: 279 SGRCV 283
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 540 SDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFK 599
SD D + PCR CD ++ + C D R+CT ++C+ F+
Sbjct: 220 SDESDCSSHQPCRSGEFMCDSGLCINSGWR--CDGDADCDDQSDERNCTT-SMCTAEQFR 276
Query: 600 CSDGMCIPFNQTCDRVYNCHDKSD-EGILYCAMRDCRPGYFKCDNNKCI 647
C G C+ + CD +C D SD E C F C N +CI
Sbjct: 277 CRSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCASDQFLCWNGRCI 325
Score = 36.6 bits (83), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
C NG C C++ G V C+C TG L ED R+C C+E + CS G
Sbjct: 358 CNVNNGGCAQKCQM-VRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGY-CSQG 408
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
E+N T + C+ F C +G CI + C+ + +C D SDE ++CRP
Sbjct: 301 EENCENTGSPQCASDQFLCWNGRCIGQRKLCNGINDCGDSSDES----PQQNCRP 351
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/658 (24%), Positives = 287/658 (43%), Gaps = 115/658 (17%)
Query: 93 IAVDWIAQNIYW--SDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES 150
+A+DWI N+Y+ D + IEV++L G YR +L++ + PS++AVDP S YL+W++
Sbjct: 2208 LAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPVSRYLYWADQ 2267
Query: 151 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKF---------FSAFYRNLSKGNIHI 201
G+ P I R+ LDG ++ ++ I D+ +D+ YR S G
Sbjct: 2268 GQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRVRSTGGTPE 2327
Query: 202 ISLSNLSDVSTISM--------------------KPYGDSYL-------------KDIKI 228
+ S+++ + +++ KP S L D+ +
Sbjct: 2328 LVRSDIASAAGVALHGQNMYWTDNRLEKLFRATSKPNQTSLLLSPTTVAASLKDIGDVAV 2387
Query: 229 YSKDAQT-GTNPCGVNN----GGCAELCLY--NGVSAVCACAHGVVAQDGKSCSEYDAFI 281
+S + Q ++PC + + C +LC + C+CA GV+ G++C E D +I
Sbjct: 2388 FSSNNQPRASSPCQITDNLRKSPCTQLCFATPGTQTPTCSCARGVLK--GRTCEEPDTYI 2445
Query: 282 MYSRVNRIDSIHMTD----KSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT 337
M+S ++I + + L PF I N + L R+ F + G
Sbjct: 2446 MFSDGDKIIDVAIEPDVKASRPLKDPFPEISNLQTFDVDVNL-----RRVYFVVESPVG- 2499
Query: 338 INSVFF---NGSNHRVLLERQGS--------VEGLAYEYVHNYLYWTCNNDATINKIDLD 386
+N +F N N R++ + + +++ +Y+T + ID
Sbjct: 2500 VNISWFSMNNAENPRLVFGASKQPHAKEIRHISDMKLDWLTQKIYFTTGRGGKVMAIDT- 2558
Query: 387 SPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYW------TNWNSHLPSIQRAFFSGFGTES 440
+ + + G D + ID C ++W T+ + P I+R+ +G +
Sbjct: 2559 --AGEHLSTIASG--DWTYALAIDPCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKV 2614
Query: 441 IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGE 500
I++ I++P A+A+D + +K++W D IE DYDG NR V++ S + ++
Sbjct: 2615 IVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVIA--SGYRAKSLDIWDR 2672
Query: 501 FIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLD---------ACAKTPC 551
+++ +D + + V R +K +G + + + R P + + D A C
Sbjct: 2673 WLYMSDPLSNGVFRIDKESGSGLENVVSDRRIPGALRVFASESDVRTRNQVCNALTSQLC 2732
Query: 552 RHLNGNCDDICKL--DETG----QVVCSCF-TGKVLMEDNR----SCTINTVCSE----- 595
+ NG CD +C + D+ G +V CSC T +++ E + C + SE
Sbjct: 2733 KTDNGGCDQLCTVVADDIGLAASKVQCSCNDTYELVQEPGKDYPTQCVLRGSNSEPAKEC 2792
Query: 596 ---HDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
++F+C DG CI TCD +C D SDE YC R C Y C N +CI S+
Sbjct: 2793 LPPYNFQCGDGSCILLGATCDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSA 2850
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 201/473 (42%), Gaps = 49/473 (10%)
Query: 209 DVSTISMKPYGDSYLKDIKI-YSKDAQTG-------------TNPCGVNNGGCAELCLYN 254
D +++ KP + D+KI Y D G N C GC++ C
Sbjct: 3225 DECSLAEKPLCEQKCMDMKIGYKCDCFEGFAIDISDQKSCHNVNECYEGISGCSQKCDDK 3284
Query: 255 GVSAVCACAHGV-VAQDGKSCS----EYDAFIMYSRVNRIDSIHMT-DKSDLNSPFESIR 308
S C C G ++ D SC E + F + + + I I + +K +L +
Sbjct: 3285 IGSYKCGCVDGYQLSSDDHSCKRTEMEPEPFFLLANKHYIRKISIDGNKYELAA------ 3338
Query: 309 NSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFN------GSNHRVLLERQGSVEGLA 362
N++ L D K + D K + V + S VL EG+A
Sbjct: 3339 --QGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVDLDEMDSPLSSYETVLRHNVYGTEGIA 3396
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
++V LY + +I +LD + ++ R+ Q P+ I + +++T W
Sbjct: 3397 VDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQ---PKAIVVHPGKGYLFFTEW- 3452
Query: 423 SHLPSIQRAFFSGFGTES-----IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD 477
S P I R G + D+ PNA+A+D+ +++LFWGDA L++I D+D
Sbjct: 3453 SLQPYIGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFD 3512
Query: 478 GTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIV 537
G R + H M V+ ++++W DW + VLR +K+TG+ L+K ++ P +
Sbjct: 3513 GNGRRHIPAQRTSHVSSMVVFDDYLYWADWNLREVLRCDKWTGKNETILKKTVQLPNDLR 3572
Query: 538 AISDNLDACAKTPCRHLNGNCDDICKLDETGQ-VVCSCFTGKVLMEDNRSCTINTVCSEH 596
+ PC NG C +C + G CSC VL+ D ++C N C+E
Sbjct: 3573 IVHPMRQPAYPNPCGDNNGGCSHLCLIGAGGNGYTCSCPDQFVLLSDQKTCEPN--CTER 3630
Query: 597 DFKCS--DGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKCDNNKC 646
F C D CIP CD +C D SDE G C R C G F+C N+ C
Sbjct: 3631 QFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNC 3683
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 223/523 (42%), Gaps = 71/523 (13%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTG-QYRYVLISG-----GVDQPSALAVDPESGYLF 146
+ DW +N+ + IE+ R G QYR V++S V P A+AVD + GY+F
Sbjct: 1887 LGFDWNGRNLVVGNKITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVF 1946
Query: 147 WSESGKIPL---IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIIS 203
W + G +ARAGLDG ++A + + I +D ++ G I ++
Sbjct: 1947 WLDRGGGAADAKVARAGLDGSNPLVIASNDLAELDHIAIDTTNTRVYFSEAKAGRISSVT 2006
Query: 204 LSN------LSD--------------------------VSTI---SMKPYGDSYLKD--- 225
LSD V+TI S P + KD
Sbjct: 2007 YDGQDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDSIEVATINGDSQPPQWTHFKKDVEN 2066
Query: 226 ---IKIYSKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQDGKSCSEYD-AF 280
IK A + +PC +NNG C +C+ C CA+G V SC +D +F
Sbjct: 2067 LANIKALQPRASSSGHPCHINNGNCDHICIPLMFAQRTCTCANGYVKDGQTSCKLFDESF 2126
Query: 281 IMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSD---IQKGT 337
++ + ++ + + E I + I + YDY+ KT++ ++ I KG
Sbjct: 2127 VIVATKTKVIGYPIDETQSKGVAMEPIGGLS----ITGVDYDYESKTIYVAEASGINKGI 2182
Query: 338 INSVFFNGSNHRVLLERQGS--VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVV 395
S V+ + GS ++ LA ++++ +Y+ N+DA I++ +
Sbjct: 2183 TAYTIGESSPRAVIRDSIGSLTIKSLAIDWINYNMYFI-NHDAERTNIEVSKLDGTYRKI 2241
Query: 396 VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALD 455
+ + + P I +D +YW + P+IQR+F G E I+++ I P L +D
Sbjct: 2242 LLTTKTETPSSIAVDPVSRYLYWAD-QGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVD 2300
Query: 456 HQAEKLFWGDARLDKIERC-DYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLR 514
++ ++W DA++D I R GT +V S I+ +A++G+ ++WTD + + R
Sbjct: 2301 VASKMIYWSDAKMDGIYRVRSTGGTPELVRSDIASAA--GVALHGQNMYWTDNRLEKLFR 2358
Query: 515 ANKYTGEEVYTLRKNI----RRPMGIVAI-SDNLDACAKTPCR 552
A + L + +G VA+ S N A +PC+
Sbjct: 2359 ATSKPNQTSLLLSPTTVAASLKDIGDVAVFSSNNQPRASSPCQ 2401
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 182/386 (47%), Gaps = 39/386 (10%)
Query: 217 PYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSC- 274
P+G+ + K + N C +++ C++ C C+C G + D ++C
Sbjct: 1424 PFGEQLVNKTKCEPE------NEC-LDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCK 1476
Query: 275 ---SEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYS 331
+ D I S NRI + K D F +I ++N I L++D +++S
Sbjct: 1477 VADNVKDTRIYVSNRNRI--YYSDHKLDNWHTFGAI-----VENAIALAWDSLTDRIYWS 1529
Query: 332 DIQKGTINSVFFNGSNHRVLLERQGSV-EGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390
DI++ I S NG+N V + + EG+A ++V LYW ++ TI +L+ PK
Sbjct: 1530 DIREKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPK- 1588
Query: 391 QRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPN 450
QR ++V +PRGI +D ++WT+W + P I+RA G + I+ T I PN
Sbjct: 1589 QRTLLVHQNVS-QPRGIAVDPRKGVMFWTDWGQN-PCIERASMDGTDRQIIVKTKIYWPN 1646
Query: 451 ALALDHQAEKLFWGDARLDKIERCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWV 508
+ALD+ +++++ D++LD I+ +YDG+ R ++ S HP +A++ + ++++D
Sbjct: 1647 TIALDYTTDRVYFADSKLDFIDFVNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDRR 1706
Query: 509 IHAVLRANKY-TGEEVYTLRKNIRRPMGIVAISDNL------DACAKTPCRHLNGNCDDI 561
+ + KY G + +G+VA+ L + C+ PC HL
Sbjct: 1707 LQKLQVYPKYPNGTTSEYPSHTFSKALGVVAVHPVLQPVIKNNPCSTNPCSHL------- 1759
Query: 562 CKLDETGQVVCSCFTGKVLMEDNRSC 587
C L+ C C G+ L + C
Sbjct: 1760 CLLNNKNTFTCKCPMGEKLDASGKKC 1785
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 162/684 (23%), Positives = 283/684 (41%), Gaps = 102/684 (14%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
+I V + +GE +T +L++ L+ IA+ P++G+MF++N K +E A MDG
Sbjct: 494 RIDVSSYDGERRTVLLAD------GLTLPLDIALDPLRGEMFFTNQLK----LEAAAMDG 543
Query: 72 TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVD 131
T R T+V+ + I VD A+ +YW DPK + +E G R ++ G
Sbjct: 544 TNRRTLVNTHTHQVSG-----IVVDITAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNV 598
Query: 132 QPSALAVDPESGYLFWSESGKIPLI--ARAGLDGKKQTILAQEIIMPIKDITLDLKFFSA 189
P + YL+W++ ++ +I + G D K + + P+ SA
Sbjct: 599 VPHPFGLALFDQYLYWTDWTRLGVIQVEKFGSDTKLLWSNTENNVFPMG--------ISA 650
Query: 190 FYRNLSKGNIHIISLSNLSDVSTISMK---PYGDSYLKDIKIYSKDAQTGTNPCGVNNGG 246
+ H ++ ++MK P ++ + + I SKD NGG
Sbjct: 651 Y---------HPMAQPGPGQSECLAMKIENPCTNADCEGMCILSKD-----------NGG 690
Query: 247 CAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSI--HMTDKSDLNS-- 302
GV CAC G +GK C + ++++S + I + +K+ +
Sbjct: 691 -------FGVGYKCACPIGQKLVNGKRCIDSIDYLLFSSNKIVRGIFPEINEKALAEAVL 743
Query: 303 PFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHR-VLLERQGSVEGL 361
P I + + E+ D + FY+DI TI + +G VL+ + +
Sbjct: 744 PISPI-SQRRIGMYFEVECDVHGNSFFYADIMDNTIYRIRPDGEGAAPVLVTHNDGLFSM 802
Query: 362 AYEYVHNYLYWTCN--NDATINKID---LDSPK--AQRIVVVRLGQHDKPRGIDIDSCDS 414
+++++ LY+ N N + KI L P +R ++ L P + +
Sbjct: 803 SFDWISKQLYYVDNIRNSLEVVKIGETGLVHPDELVRRQLITELRD---PVSVVVHPWKG 859
Query: 415 RIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERC 474
+++ +I R G + I T + P+ +A+D +L WGD L I
Sbjct: 860 LLFYAE-AMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLKTISCM 918
Query: 475 DYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK---NIR 531
D+DG N + L +P+ P + + E+I++ +++ R +K G +R+ + R
Sbjct: 919 DFDGKNVVKLDIDNPI-PVAITIMNEYIYYVHQRPYSIRRVHKKNGGGSKIVREFGADER 977
Query: 532 RPMGIVAISDN----LDACAKTPCRHLNGNCDDICKLDETG------QVVCSCFTGKVL- 580
+ A S D + PCR C +C + + C+C G ++
Sbjct: 978 SIFSLKACSHQNQPIPDDSREHPCRA--SQCTQLCFATPSESHPNELEAKCACRQGFMIN 1035
Query: 581 MEDNRSCT------INTVCSEH--DFKCSDGMCIPFNQTCDRVYNCHDKSDE----GILY 628
E+N SC I +CS + F+C +G CIP CD +C D+SDE G
Sbjct: 1036 KENNHSCQKDPAEKIEQLCSSNSTQFQCKNGRCIPKEWKCDGENDCLDESDEIDEKGDKC 1095
Query: 629 CAMRDCRPGYFKCDN-NKCILSSH 651
+C KC N KCI + +
Sbjct: 1096 FHETECAENTIKCRNTKKCIPAQY 1119
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/556 (23%), Positives = 219/556 (39%), Gaps = 72/556 (12%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTG-QYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
IA+DW+ +N+YW D N IEVA L + R +L+ V QP +AVDP G +FW++ G
Sbjct: 1560 IALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVMFWTDWG 1619
Query: 152 KIPLIARAGLDG-KKQTILAQEIIMP---IKDITLDLKFFS-------AFYRNLSKGNIH 200
+ P I RA +DG +Q I+ +I P D T D +F+ F G
Sbjct: 1620 QNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDFIDFVNYDGSGRTQ 1679
Query: 201 IISLSNLSDVSTI-----SMKPYGDSYLKDIKIYSKDAQTGT------------------ 237
+++ S M Y D L+ +++Y K T
Sbjct: 1680 VLASSKFVQHPHALAIFEDMMYYSDRRLQKLQVYPKYPNGTTSEYPSHTFSKALGVVAVH 1739
Query: 238 ---------NPCGVNNGGCAELCLYNGVSA-VCACAHG-VVAQDGKSC-SEYDAFIMYSR 285
NPC N C+ LCL N + C C G + GK C + F++ +
Sbjct: 1740 PVLQPVIKNNPCSTN--PCSHLCLLNNKNTFTCKCPMGEKLDASGKKCIDDAKPFLVIIQ 1797
Query: 286 VNRIDSIHMTDKSDLNSP-FESIRNSTMMKNIIELSYDYKRKTLFYSD-------IQKGT 337
+ I M S+ +P + + + N + +YD + +F + + + T
Sbjct: 1798 KTNVFGIEMNSASEKETPVLAGMVPLSGLGNAFDAAYDALSEEMFILEHTNHAKTLAQIT 1857
Query: 338 INSVFF----NGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATIN-KIDLDSPKAQR 392
+S + NG N + + + N N T +I K R
Sbjct: 1858 TDSAIYRSTVNGGNKTKMFSSAVPDDAYCLGFDWNGRNLVVGNKITQTIEIIRTQGKQYR 1917
Query: 393 IVVVRLGQHD----KPRGIDIDSCDSRIYWTNWNSHL--PSIQRAFFSGFGTESIITTDI 446
V++ Q P I +D+ ++W + + RA G I + D+
Sbjct: 1918 SVILSNDQSPTAVVTPVAIAVDADKGYVFWLDRGGGAADAKVARAGLDGSNPLVIASNDL 1977
Query: 447 TMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTD 506
+ +A+D ++++ +A+ +I YDG +R + P +A YG+ +F+ D
Sbjct: 1978 AELDHIAIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVLSDGGRQPNGLAFYGDRLFYAD 2037
Query: 507 WVIHAVLRA--NKYTGEEVYT-LRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICK 563
++ A N + +T +K++ I A+ + + PC NGNCD IC
Sbjct: 2038 SAFDSIEVATINGDSQPPQWTHFKKDVENLANIKALQPRASS-SGHPCHINNGNCDHICI 2096
Query: 564 LDETGQVVCSCFTGKV 579
Q C+C G V
Sbjct: 2097 PLMFAQRTCTCANGYV 2112
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 37/310 (11%)
Query: 302 SPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH-----RVLLERQG 356
+P E ++ + I + +DY + +F++D + S + ++ L+
Sbjct: 412 NPDEEVKKLASGEFIYGIDFDYGDRKIFWTDRLAHSAFSADVDDEGEISQIKKLSLKSLV 471
Query: 357 SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRI 416
LA +++ N LY ++ +ID+ S +R V+ P I +D +
Sbjct: 472 YPRCLAVDWITNTLYII---ESGSRRIDVSSYDGERRTVLLADGLTLPLDIALDPLRGEM 528
Query: 417 YWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDY 476
++TN ++ A G +++ T + + +D A++++W D ++D++E DY
Sbjct: 529 FFTNQ----LKLEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESIDY 584
Query: 477 DGTNRIVLSK---ISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR- 532
G +R ++++ + P HPF +A++ ++++WTDW V++ K+ G + L N
Sbjct: 585 QGNDRRIVAQGMNVVP-HPFGLALFDQYLYWTDWTRLGVIQVEKF-GSDTKLLWSNTENN 642
Query: 533 --PMGIVAI----------SDNLDACAKTPCRHLNGNCDDICKL--DETGQVV---CSCF 575
PMGI A S+ L + PC N +C+ +C L D G V C+C
Sbjct: 643 VFPMGISAYHPMAQPGPGQSECLAMKIENPC--TNADCEGMCILSKDNGGFGVGYKCACP 700
Query: 576 TGKVLMEDNR 585
G+ L+ R
Sbjct: 701 IGQKLVNGKR 710
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 93/235 (39%), Gaps = 59/235 (25%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
IAVDW+ + +Y + +E I V L G++ LI + QP A+ V P GYLF++E
Sbjct: 3395 IAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKAIVVHPGKGYLFFTEWSL 3454
Query: 153 IPLIARAGLDGKKQTILAQEIIMPI-KDITLDLKFFSA-----FYRNLSKGNIHIISLSN 206
P I R LDG + E+ PI K DL + +A F L G+ H+ +
Sbjct: 3455 QPYIGRIALDG------SPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGF 3508
Query: 207 L------------SDVSTISMKPYGDSYL------------------------------- 223
+ S +S D YL
Sbjct: 3509 MDFDGNGRRHIPAQRTSHVSSMVVFDDYLYWADWNLREVLRCDKWTGKNETILKKTVQLP 3568
Query: 224 KDIKIYSKDAQTG-TNPCGVNNGGCAELCL--YNGVSAVCACA-HGVVAQDGKSC 274
D++I Q NPCG NNGGC+ LCL G C+C V+ D K+C
Sbjct: 3569 NDLRIVHPMRQPAYPNPCGDNNGGCSHLCLIGAGGNGYTCSCPDQFVLLSDQKTC 3623
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
CSE +F+C+DG CIP ++ CD C D DE C +R C PG+ +CD+ CI
Sbjct: 3878 CSESEFRCNDGKCIPGSKVCDGTIQCSDGLDES--QCTLRRCLPGHRQCDDGTCI 3930
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 119/328 (36%), Gaps = 69/328 (21%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
+V +L G + ++ND + I IA P K M+W + +++ +
Sbjct: 4192 LVQLSLHGSGTNRHAAAKANDDD--NDIIGIAFDPRKELMYWIDGSERTIYRSAIANGNQ 4249
Query: 73 KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV--------------------- 111
E + A+ IAVD+ N++ + EN+
Sbjct: 4250 SHEGQKLDVDFAAMGVVPTAIAVDYTTGNLFIAAVSENIENGLVTARKKRMSEPIDNQNT 4309
Query: 112 --IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
I V G+Y +++G + QP+AL P +G + +S++G I A +DG + I+
Sbjct: 4310 GFIFVCLPDGRYLKKIVAGHLQQPTALITAPSAGRICYSDAGLHAKIECADMDGTHRQII 4369
Query: 170 AQEIIMPIKDITLD------LKFFSAFYRNLSKGNI-----------------------H 200
++++ + +D + + YR + NI H
Sbjct: 4370 VKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERTTVVHDRHIPYAVDVFENH 4429
Query: 201 IISLSNLSD------------VSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCA 248
I LS S VS ++ ++ + Y+KD Q + G C+
Sbjct: 4430 IYWLSRESKTLYVQDKFGRGRVSVLASDLEDGHTVRVSQKYAKDTQRTVS--GCERAQCS 4487
Query: 249 ELCL-YNGVSAVCACAHGVVAQDGKSCS 275
LC+ C C G+V Q SC+
Sbjct: 4488 HLCVSLPSTGFACLCPDGIVPQLDGSCA 4515
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 583 DNRSCTINT-VCSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDEGILYC-AMRDCRPGYF 639
D SC + C+ FKC S G+CIP + CD +C D SDE C + R C F
Sbjct: 1259 DEDSCAVTAESCTPDQFKCVSSGLCIPASWKCDGQQDCDDGSDEPKFGCTSGRQCSSDQF 1318
Query: 640 KCDNNKCILSS 650
KC N +CIL++
Sbjct: 1319 KCGNGRCILNN 1329
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
VC+ F+C + CIP CD +C D SDE + C C F C N +CI
Sbjct: 1145 VCAAKKFQCDNHRCIPEQWKCDSDNDCGDGSDEKLEMCGNATCAANQFSCANGRCI 1200
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
C++ +F+CS+ CI CD +C D SDE C C+P +F+C N+KC+ +S
Sbjct: 3100 CNKGEFRCSNQHCIHSTWECDGDNDCLDGSDEHA-NCTYSSCQPDFFQCANHKCVPNS 3156
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNK 645
N C+ + F C++G CIP CD +C+D +DE C C F+C N +
Sbjct: 1184 NATCAANQFSCANGRCIPIYWLCDGDNDCYDGTDEDKERCPPVQCSALQFRCANGR 1239
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 588 TINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
T ++VC+E+DF+C+DG CI CD +C D DE C C+ ++CD
Sbjct: 48 TASSVCNENDFRCNDGKCIRTEWKCDGSGDCSDGEDEKD--CPHPGCKSDQWQCD 100
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 582 EDNRSCTINTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFK 640
ED C CS F+C++G C+P CD +C D SDE C P FK
Sbjct: 1218 EDKERCPP-VQCSALQFRCANGRQCVPLRNHCDGQSDCEDGSDEDSCAVTAESCTPDQFK 1276
Query: 641 C 641
C
Sbjct: 1277 C 1277
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 580 LMEDNRSCTIN-TVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPG 637
L ++ SC+ N T C ++ F+C+D CI + CD +C D SDE C + C
Sbjct: 168 LSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCADGSDEPDT-CEFKKCTAN 226
Query: 638 YFKCDNNKC 646
F+C N +C
Sbjct: 227 EFQCKNKRC 235
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC----AMRDCRPG 637
++N+ +N C++H +C G CIP CD +C D DE C + C
Sbjct: 2950 DENQLFCMNQQCAQHYVRCPSGRCIPETWQCDGDNDCSDGWDETHTNCTDTAGKKICVGD 3009
Query: 638 Y-FKCDNNKCI 647
Y F+CDN KCI
Sbjct: 3010 YLFQCDNLKCI 3020
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 597 DFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCA--MRDCRPGYFKCDNNKCILSS 650
+F+C+ G CIP CD +C D SDE C R C F+C++ KCI S
Sbjct: 3838 EFRCATSGKCIPRRWMCDTENDCGDNSDELDASCGGTTRPCSESEFRCNDGKCIPGS 3894
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 583 DNRSCTINTV-------CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
D + C N+ CS F+C+ G CI + CDR ++C D+SDE L C + +C
Sbjct: 3170 DEKDCPKNSASAQKASKCSNGQFQCTSGECIDDAKVCDRNFDCTDRSDESSL-CFIDEC 3227
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKCDNNKCILS 649
CS +F+C++ +CIP CD +C D SDE C C P F+C +++ L+
Sbjct: 3958 TCSPFEFECANSVCIPRKFMCDGDNDCGDNSDETSSECRSAQCDPPLRFRCAHSRLCLN 4016
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 439 ESIITTDITMPNALALDHQAEKLFWGDARLD-KIERCDYDGTNRIVLSKISPLHPFDMAV 497
+ I+ + P AL A ++ + DA L KIE D DGT+R ++ K P MA+
Sbjct: 4323 KKIVAGHLQQPTALITAPSAGRICYSDAGLHAKIECADMDGTHRQIIVKDLVFSPTSMAI 4382
Query: 498 ---YGEFIFWTD 506
G I+W D
Sbjct: 4383 DEGKGNRIYWVD 4394
Score = 36.2 bits (82), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 604 MCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
+CI CD +C DK+DE L+C + C Y +C + +CI
Sbjct: 2931 ICIQPADLCDGYDDCGDKADENQLFCMNQQCAQHYVRCPSGRCI 2974
Score = 36.2 bits (82), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 21/237 (8%)
Query: 388 PKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDIT 447
P + + + G +P + RI +++ H I+ A G + I+ +
Sbjct: 4317 PDGRYLKKIVAGHLQQPTALITAPSAGRICYSDAGLHA-KIECADMDGTHRQIIVKDLVF 4375
Query: 448 MPNALALDH-QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLH-PFDMAVYGEFIFWT 505
P ++A+D + +++W D + +++ + DG+ R + + H P+ + V+ I+W
Sbjct: 4376 SPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERTTV--VHDRHIPYAVDVFENHIYWL 4433
Query: 506 DWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVA-------ISDNLDACAKTPCRHLNGNC 558
+ +K+ V L ++ + + C + C HL
Sbjct: 4434 SRESKTLYVQDKFGRGRVSVLASDLEDGHTVRVSQKYAKDTQRTVSGCERAQCSHL---- 4489
Query: 559 DDICKLDETGQVVCSCFTGKVLMEDNRSCT--INTVCSEHDFKCSDGMCIPFNQTCD 613
L TG C C G V D T + + KC++G + +C+
Sbjct: 4490 --CVSLPSTG-FACLCPDGIVPQLDGSCATQHVEALTMPKQCKCTNGGKCRLDGSCE 4543
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGM--------CIPFNQTCDRVYNCHDKSDEGILYCAM-- 631
E +R N C++ +F C+ CIP CD C DE C
Sbjct: 3038 EHSRHGCGNRTCTDQEFHCTSNAKLAQPKYECIPRAWLCDGDVTCAGGEDESTELCKTEK 3097
Query: 632 RDCRPGYFKCDNNKCILSS 650
++C G F+C N CI S+
Sbjct: 3098 KECNKGEFRCSNQHCIHST 3116
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 587 CTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
CT CS FKC +G CI N CD +C D SDE
Sbjct: 1307 CTSGRQCSSDQFKCGNGRCILNNWLCDGENDCGDGSDE 1344
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
CS FKC++G C+ CDR +C D SDE
Sbjct: 4049 CSSDQFKCANGKCVNGTVACDRKDDCGDASDE 4080
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
C+ ++F+C + C P CD +C D SDE C C PG + C
Sbjct: 223 CTANEFQCKNKRCQPRKFRCDYYDDCGDNSDED--ECGEYRCPPGKWNC 269
>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis catus GN=EGF PE=2 SV=1
Length = 1210
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 178/371 (47%), Gaps = 17/371 (4%)
Query: 222 YLKDIKIYSKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQ-DGKSC--SEY 277
+ + + D +T + +NGGC++LCL + VS C C G Q D KSC S
Sbjct: 419 FCPEGSVLETDGKTCSGCSSPDNGGCSQLCLPLSPVSWECGCFPGYDLQLDKKSCAASGP 478
Query: 278 DAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT 337
F++++ I + D +D S S M + L +D ++++
Sbjct: 479 QPFLLFANSQDIRHVRF-DGTDYGSLL-----SQQMGMVFALDHDPVENKIYFAHTALKW 532
Query: 338 INSVFFNGSNHRVLLERQGSV-EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
I +GS L+E V EGLA +++ YWT A I DL+ + I+
Sbjct: 533 IERANMDGSQRERLIEEAVDVPEGLAIDWIDRKFYWTDRGKALIEGSDLNGKHREIIIKE 592
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
+ Q PRGI + R++WT+ + P I+ + G G I ++D+ P+ + +D+
Sbjct: 593 EVSQ---PRGIAVHPMAKRLFWTDMGIN-PRIESSSLQGIGRRVIASSDLVWPSGITIDY 648
Query: 457 QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRAN 516
+KL+W DA+ IE + DG+ R L++ HPF +AV+ + ++++DW + +V+R N
Sbjct: 649 LTDKLYWCDAKQSVIEMANLDGSKRQRLAQNDVGHPFAIAVFEDHVWFSDWTMPSVIRVN 708
Query: 517 KYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFT 576
K TG+ LR ++ +P +V + L PC H NG C+ ICK + G C C
Sbjct: 709 KRTGKNRVRLRGSMLKPSSLVVVHP-LAKPGSDPCLHQNGGCEHICK-ERFGSAQCLCRE 766
Query: 577 GKVLMEDNRSC 587
G V D + C
Sbjct: 767 GFVKAPDGKMC 777
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 52/270 (19%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+ K+++++ + IE A MDG++RE ++ + AV +A+DWI + YW+D
Sbjct: 518 PVENKIYFAHTA--LKWIERANMDGSQRERLIEE----AVDVPE-GLAIDWIDRKFYWTD 570
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ +IE + L G++R ++I V QP +AV P + LFW++ G P I + L G +
Sbjct: 571 RGKALIEGSDLNGKHREIIIKEEVSQPRGIAVHPMAKRLFWTDMGINPRIESSSLQGIGR 630
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISM------KPYGD 220
++A ++ IT+D ++ + + +I ++NL + P+
Sbjct: 631 RVIASSDLVWPSGITIDYLTDKLYWCDAKQS---VIEMANLDGSKRQRLAQNDVGHPFAI 687
Query: 221 SYLKD------------IKIYSKD-----------------------AQTGTNPCGVNNG 245
+ +D I++ + A+ G++PC NG
Sbjct: 688 AVFEDHVWFSDWTMPSVIRVNKRTGKNRVRLRGSMLKPSSLVVVHPLAKPGSDPCLHQNG 747
Query: 246 GCAELCLYNGVSAVCACAHGVV-AQDGKSC 274
GC +C SA C C G V A DGK C
Sbjct: 748 GCEHICKERFGSAQCLCREGFVKAPDGKMC 777
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 154/355 (43%), Gaps = 28/355 (7%)
Query: 262 CAHGVVAQDGKS-CSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELS 320
C+ G + G S C + F+++S I I + + +E + + I++
Sbjct: 28 CSEGSSSGKGNSTCVGPEPFLIFSHGGSIFRIDLDGTN-----YEQLVADAGVSVIMDFH 82
Query: 321 YDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
Y YK + L++ D+++ + VF NG+ + + +V G+A +++ L W+ + I
Sbjct: 83 Y-YKER-LYWVDLERQLLQRVFLNGTRQETVCNIEKNVSGMAINWINEELIWSNQQEGII 140
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
D+ ++ V L P + ID + I+W++ + S+ RA +G +
Sbjct: 141 TVTDMKGNNSR----VLLSALKYPANVAIDPVERFIFWSSEVAG--SLHRADLNGVEVKI 194
Query: 441 IITTDITMPNALALDHQAEKLFW----GDARLDKIERCDYDGTNRIVLSKISPLHPFDMA 496
++ T + A++LD ++LFW D I C+YDG + ++ F M+
Sbjct: 195 LLETSERI-TAVSLDVLDKRLFWIQNNRDGSNSYICSCNYDGGSVHFNKHLTQHSLFAMS 253
Query: 497 VYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKT----PCR 552
++G+ IF++ W + ANK L + P G + L A++ P +
Sbjct: 254 LFGDRIFYSTWKKKTIWIANKRKDMVRINLNPSFVPPGGTKVVHPLLQPKAESDAWAPGQ 313
Query: 553 HL---NGNC-DDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
L GNC +C+ D +C+C G L D + C C+ + C+ G
Sbjct: 314 KLCLRKGNCTGSVCEQDSKSH-LCTCAEGYTLSPDGKHCEDVNECAFWNHGCTLG 367
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 63/282 (22%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPK 108
K +++W ++ +Q+ ++ F++GT++ETV + +K + +A++WI + + WS+ +
Sbjct: 85 KERLYWVDLERQL--LQRVFLNGTRQETVCNIEKNVS------GMAINWINEELIWSNQQ 136
Query: 109 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTI 168
E +I V + G VL+S + P+ +A+DP ++FWS S + RA L+G + I
Sbjct: 137 EGIITVTDMKGNNSRVLLS-ALKYPANVAIDPVERFIFWS-SEVAGSLHRADLNGVEVKI 194
Query: 169 LAQ--EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLS----------NLSDVSTISMK 216
L + E I + LD + F N N +I S + +L+ S +M
Sbjct: 195 LLETSERITAVSLDVLDKRLF-WIQNNRDGSNSYICSCNYDGGSVHFNKHLTQHSLFAMS 253
Query: 217 PYGDSYL------KDIKIYSKD---AQTGTNPCGVNNGGC-------------------A 248
+GD K I I +K + NP V GG
Sbjct: 254 LFGDRIFYSTWKKKTIWIANKRKDMVRINLNPSFVPPGGTKVVHPLLQPKAESDAWAPGQ 313
Query: 249 ELCLYNG-----------VSAVCACAHG-VVAQDGKSCSEYD 278
+LCL G S +C CA G ++ DGK C + +
Sbjct: 314 KLCLRKGNCTGSVCEQDSKSHLCTCAEGYTLSPDGKHCEDVN 355
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRY 123
I DGT +++SQ+ + D + IY++ IE A + G R
Sbjct: 490 IRHVRFDGTDYGSLLSQQ-----MGMVFALDHDPVENKIYFAHTALKWIERANMDGSQRE 544
Query: 124 VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLD 183
LI VD P LA+D +W++ GK LI + L+GK + I+ +E + + I +
Sbjct: 545 RLIEEAVDVPEGLAIDWIDRKFYWTDRGKA-LIEGSDLNGKHREIIIKEEVSQPRGIAVH 603
Query: 184 LKFFSAFYRNL 194
F+ ++
Sbjct: 604 PMAKRLFWTDM 614
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 188/434 (43%), Gaps = 72/434 (16%)
Query: 275 SEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ 334
+E + FI+Y+ I + + P +R + + L +DY+R L++SD+
Sbjct: 755 AEENEFILYAMRKSIYRYDLASGATEQLPLSGLRAA------VALDFDYERNCLYWSDLA 808
Query: 335 KGTINSVFFNGSNHRVLLERQG--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ- 391
TI + NGS + ++ G +VE LA+E + LYW DA KI++ +P
Sbjct: 809 LDTIQRLCLNGSTGQEVIINSGLETVEALAFEPLSQLLYWV---DAGFKKIEVANPDGDF 865
Query: 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNA 451
R+ +V D+PR + + + ++WT+W P I R++ G +++ D+ PN
Sbjct: 866 RLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSYMDGSAAYRLVSEDVKWPNG 925
Query: 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHA 511
+++D Q ++W DA LD IER + G R V+ P HP+ +AV+ I+W DW +
Sbjct: 926 ISVDSQW--IYWTDAYLDCIERITFSGQQRSVILDSLP-HPYAIAVFKNEIYWDDWSQLS 982
Query: 512 VLRANKYTGEEVYTLRKNIRRPMGIVAI----SDNLDACAKTPCRHL---NGNCDDICKL 564
+ RA+K++ +V L + M + + +AC PC L N C+
Sbjct: 983 IFRASKHSRSQVEILASQLTGLMDMKVFYKGKNAGSNACVPQPCSLLCLPKANNSKSCRC 1042
Query: 565 DE--------TGQVVCSCFTGKVL------------------------------------ 580
E +G ++C C G
Sbjct: 1043 PEGVASSVLPSGDLMCDCPQGYQRKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDND 1102
Query: 581 ---MEDNRSCTINTVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
M D R+C ++ F+C + G CIP + CD +C D SDE +C M CR
Sbjct: 1103 CGDMSDERNCPTTVCDADTQFRCQESGTCIPLSYKCDLEDDCGDNSDES--HCEMHQCRS 1160
Query: 637 GYFKCDNNKCILSS 650
F C + CI SS
Sbjct: 1161 DEFNCSSGMCIRSS 1174
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 52/258 (20%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++WS++ + TI+ ++G+ + V+ V A +A + ++Q +YW D
Sbjct: 802 LYWSDLA--LDTIQRLCLNGSTGQEVIINSGLETVEA----LAFEPLSQLLYWVDAGFKK 855
Query: 112 IEVARLTGQYRYVLISGGV-DQPSALAVDPESGYLFWSESGKI-PLIARAGLDGKKQTIL 169
IEVA G +R +++ V D+P AL + P+ G +FW++ G + P I R+ +DG L
Sbjct: 856 IEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSYMDGSAAYRL 915
Query: 170 AQEIIMPIKDITLDLKF---------------FSA-----------------------FY 191
E + I++D ++ FS ++
Sbjct: 916 VSEDVKWPNGISVDSQWIYWTDAYLDCIERITFSGQQRSVILDSLPHPYAIAVFKNEIYW 975
Query: 192 RNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELC 251
+ S+ +I S + S V ++ + G L D+K++ K G+N C C+ LC
Sbjct: 976 DDWSQLSIFRASKHSRSQVEILASQLTG---LMDMKVFYKGKNAGSNACVPQP--CSLLC 1030
Query: 252 LYNG-VSAVCACAHGVVA 268
L S C C GV +
Sbjct: 1031 LPKANNSKSCRCPEGVAS 1048
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
KI V N +G+++ TI+ ++S L + ++ + P +G MFW++ I ++MDG
Sbjct: 855 KIEVANPDGDFRLTIV-----NSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSYMDG 909
Query: 72 TKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV 130
+ +VS+ K+P I+VD +Q IYW+D + IE +GQ R V++ +
Sbjct: 910 SAAYRLVSEDVKWPN------GISVD--SQWIYWTDAYLDCIERITFSGQQRSVILD-SL 960
Query: 131 DQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFF 187
P A+AV ++W + ++ + + + ILA ++ +D+K F
Sbjct: 961 PHPYAIAVFKNE--IYWDDWSQLSIFRASKHSRSQVEILASQLTG-----LMDMKVF 1010
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 583 DNRSCT-INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D +CT I C +F+C +G CIP CD +C D SDE + C + C F C
Sbjct: 1188 DEANCTAIYHTCEASNFQCHNGHCIPQRWACDGDADCQDGSDEDPVSCE-KKCNG--FHC 1244
Query: 642 DNNKCILSS 650
N CI SS
Sbjct: 1245 PNGTCIPSS 1253
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C ++ C +F CS GMCI + CD +C D SDE C F+C
Sbjct: 1149 DESHCEMHQ-CRSDEFNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCEASNFQCH 1207
Query: 643 NNKCI 647
N CI
Sbjct: 1208 NGHCI 1212
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 593 CSEH-DFKCSDGMCIPFNQTCDRVYNCHDKSDEG------ILYCAM---RDCRPGYFKCD 642
CS + F C +G CIP CDR +C D SDE +L C P YF C
Sbjct: 1368 CSRYFQFHCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHVLPSPTPGPSTCLPNYFHCS 1427
Query: 643 NNKCILSS 650
+ C++ +
Sbjct: 1428 SGACVMGT 1435
Score = 36.2 bits (82), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 582 EDNRSCTINTV--CSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDE 624
+D +C ++ C+ +FKC DG CI ++ CD +C D+SDE
Sbjct: 1501 QDEANCPTHSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 36.2 bits (82), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 16/70 (22%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEG---------------ILYCAMRDCRPG 637
C E F+C +G+CI CD + +C D SDE +C C P
Sbjct: 1325 CDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFHCENGHCIPN 1384
Query: 638 YFKCD-NNKC 646
+KCD N C
Sbjct: 1385 RWKCDRENDC 1394
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN-NKCILSS 650
F C +G CIP ++ CD + +C D SDE +C R F C N +C+ S
Sbjct: 1242 FHCPNGTCIPSSKHCDGLRDCPDGSDE--QHCEPFCTRFMDFVCKNRQQCLFHS 1293
>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF PE=1 SV=2
Length = 1214
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 184/371 (49%), Gaps = 17/371 (4%)
Query: 222 YLKDIKIYSKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQ-DGKSC--SEY 277
+ + + D +T + +NGGC++LCL + V+ C C G Q D KSC S
Sbjct: 422 FCPEDSVLEADGKTCSGCSSPDNGGCSQLCLPLSPVTWECGCFPGYDLQLDKKSCRASGP 481
Query: 278 DAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT 337
F++++ I +H D +D +E++ N + ++ L +D ++++
Sbjct: 482 PPFLLFANSQDIRHMHF-DGTD----YETLLNQ-QIGMVLALDHDPVENKVYFAHTALKW 535
Query: 338 INSVFFNGSNHRVLLERQGSV-EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
I +GS L E V EGLA +++ YWT + I DL+ + I+
Sbjct: 536 IERANMDGSQRERLFEEAVDVPEGLAIDWIGRKFYWTDRGRSLIEGSDLNGKYREIIIKE 595
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
+ Q PRGI + R++WT+ ++ P I+ + G G + I ++D+ P+ + +D+
Sbjct: 596 DISQ---PRGIAVHPVAKRLFWTDMGTN-PRIESSSLQGIGRQVIASSDLVWPSGITIDY 651
Query: 457 QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRAN 516
+KL+W DA+ IE + DG+ R L++ HPF +AV+ + ++++DW + +V+R N
Sbjct: 652 LTDKLYWCDAKQSVIEMSNLDGSRRQRLAQNDVGHPFAVAVFEDHVWFSDWTMPSVIRVN 711
Query: 517 KYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFT 576
K TG+ LR ++ +P +V + L PC H NG C+ ICK + G C C
Sbjct: 712 KRTGKNRVRLRGSMLKPSSLVVVHP-LAKPGTNPCLHQNGGCEHICK-ESFGTAQCLCHE 769
Query: 577 GKVLMEDNRSC 587
G + D + C
Sbjct: 770 GFLKAPDGKMC 780
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 159/357 (44%), Gaps = 29/357 (8%)
Query: 262 CAHGVVAQDGKS-CSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELS 320
C G + +G + C F+++S N I I + + E + + +++
Sbjct: 28 CPEGSPSGNGNATCVGPAPFLIFSHGNSIFRIDLEGTN-----HEQLVADAGISVLMDFH 82
Query: 321 YDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
Y+ +R +++ D+++ + VF NG+ + + +V G+A +++ L W+ + TI
Sbjct: 83 YNEER--IYWVDLERQLLQRVFLNGTRQEKVCNLEKNVSGMAINWINEELIWSNQQEGTI 140
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
D+ ++ V L P + +D + ++W++ + S+ RA +G
Sbjct: 141 TVTDMKGNNSR----VLLSALKYPANVAVDPVERLMFWSSVVAG--SLHRADVTGVEVRL 194
Query: 441 IITTDITMPNALALDHQAEKLFW----GDARLDKIERCDYDGTNRIVLSKISPLHPFDMA 496
++ T + A++LD ++LFW + +I CDYDG + ++ + F M+
Sbjct: 195 LLETSEEI-AAVSLDVLDKRLFWIQYNREGGSSRICSCDYDGGSVHFSKHLTQHNVFAMS 253
Query: 497 VYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKN--IRRPMGI------VAISDNLDACA- 547
++G+ IF++ W + ANK+TG+++ + N P GI V DA A
Sbjct: 254 LFGDHIFYSTWKKKTIWVANKHTGKDMVKMNLNPAFVPPGGIKVVHPLVQPKAEGDAWAS 313
Query: 548 -KTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
+ C+ GNC E VC+C G L +D R C C+ + C+ G
Sbjct: 314 DQKLCKLRKGNCRGSMCGQEPKSHVCTCAEGYTLSQDGRKCEDVNECAFWNHGCTLG 370
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 54/271 (19%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+ K+++++ + IE A MDG++RE + + +A+DWI + YW+D
Sbjct: 521 PVENKVYFAHTA--LKWIERANMDGSQRERLFEE-----AVDVPEGLAIDWIGRKFYWTD 573
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-KK 165
++IE + L G+YR ++I + QP +AV P + LFW++ G P I + L G +
Sbjct: 574 RGRSLIEGSDLNGKYREIIIKEDISQPRGIAVHPVAKRLFWTDMGTNPRIESSSLQGIGR 633
Query: 166 QTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISM------KPYG 219
Q I + +++ P IT+D ++ + + +I +SNL + P+
Sbjct: 634 QVIASSDLVWP-SGITIDYLTDKLYWCDAKQS---VIEMSNLDGSRRQRLAQNDVGHPFA 689
Query: 220 DSYLKD------------IKIYSKD-----------------------AQTGTNPCGVNN 244
+ +D I++ + A+ GTNPC N
Sbjct: 690 VAVFEDHVWFSDWTMPSVIRVNKRTGKNRVRLRGSMLKPSSLVVVHPLAKPGTNPCLHQN 749
Query: 245 GGCAELCLYNGVSAVCACAHGVV-AQDGKSC 274
GGC +C + +A C C G + A DGK C
Sbjct: 750 GGCEHICKESFGTAQCLCHEGFLKAPDGKMC 780
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 66/281 (23%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
+++W ++ +Q+ ++ F++GT++E V + +K + +A++WI + + WS+ +E
Sbjct: 87 RIYWVDLERQL--LQRVFLNGTRQEKVCNLEKNVS------GMAINWINEELIWSNQQEG 138
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 170
I V + G VL+S + P+ +AVDP +FWS S + RA + G + +L
Sbjct: 139 TITVTDMKGNNSRVLLS-ALKYPANVAVDPVERLMFWS-SVVAGSLHRADVTGVEVRLLL 196
Query: 171 Q--EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISL----------SNLSDVSTISMKPY 218
+ E I + LD + F Y N G+ I S +L+ + +M +
Sbjct: 197 ETSEEIAAVSLDVLDKRLFWIQY-NREGGSSRICSCDYDGGSVHFSKHLTQHNVFAMSLF 255
Query: 219 GD----SYLKDIKIYSKDAQTGT-------NP---------------------------- 239
GD S K I+ + TG NP
Sbjct: 256 GDHIFYSTWKKKTIWVANKHTGKDMVKMNLNPAFVPPGGIKVVHPLVQPKAEGDAWASDQ 315
Query: 240 --CGVNNGGC-AELCLYNGVSAVCACAHG-VVAQDGKSCSE 276
C + G C +C S VC CA G ++QDG+ C +
Sbjct: 316 KLCKLRKGNCRGSMCGQEPKSHVCTCAEGYTLSQDGRKCED 356
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRY 123
I DGT ET+++Q+ L + D + +Y++ IE A + G R
Sbjct: 493 IRHMHFDGTDYETLLNQQ-----IGMVLALDHDPVENKVYFAHTALKWIERANMDGSQRE 547
Query: 124 VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLD 183
L VD P LA+D +W++ G+ LI + L+GK + I+ +E I + I +
Sbjct: 548 RLFEEAVDVPEGLAIDWIGRKFYWTDRGR-SLIEGSDLNGKYREIIIKEDISQPRGIAVH 606
Query: 184 LKFFSAFYRNLS 195
F+ ++
Sbjct: 607 PVAKRLFWTDMG 618
>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2
Length = 1207
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 184/371 (49%), Gaps = 17/371 (4%)
Query: 222 YLKDIKIYSKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQ-DGKSC--SEY 277
+ + + +D +T + +NGGC++LC+ + VS C C G Q D KSC S
Sbjct: 422 FCPEGSVLERDGKTCSGCSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAASGP 481
Query: 278 DAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT 337
F++++ I +H D +D + S M + L +D ++++
Sbjct: 482 QPFLLFANSQDIRHMHF-DGTDYGTLL-----SQQMGMVYALDHDPVENKIYFAHTALKW 535
Query: 338 INSVFFNGSNHRVLLERQGSV-EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
I +GS L+E V EGLA +++ YWT + I + DL+ +++ I
Sbjct: 536 IERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKE 595
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
+ Q PRGI + R++WT+ + P I+ + G G I ++D+ P+ + +D
Sbjct: 596 NISQ---PRGIAVHPMAKRLFWTDTGIN-PRIESSSLQGLGRLVIASSDLIWPSGITIDF 651
Query: 457 QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRAN 516
+KL+W DA+ IE + DG+ R L++ HPF +AV+ ++++++DW + +V+R N
Sbjct: 652 LTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPFAVAVFEDYVWFSDWAMPSVMRVN 711
Query: 517 KYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFT 576
K TG++ L+ ++ +P +V + L PC + NG C+ ICK G CSC
Sbjct: 712 KRTGKDRVRLQGSMLKPSSLVVVHP-LAKPGADPCLYQNGGCEHICK-KRLGTAWCSCRE 769
Query: 577 GKVLMEDNRSC 587
G + D ++C
Sbjct: 770 GFMKASDGKTC 780
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 157/358 (43%), Gaps = 29/358 (8%)
Query: 261 ACAHGVVAQDGKS-CSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIEL 319
+C G +A +G S C F+++S N SI D N +E + + I++
Sbjct: 27 SCPEGTLAGNGNSTCVGPAPFLIFSHGN---SIFRIDTEGTN--YEQLVVDAGVSVIMDF 81
Query: 320 SYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDAT 379
Y+ KR +++ D+++ + VF NGS + + +V G+A +++ + W+ +
Sbjct: 82 HYNEKR--IYWVDLERQLLQRVFLNGSRQERVCNIEKNVSGMAINWINEEVIWSNQQEGI 139
Query: 380 INKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTE 439
I D+ + + L P + +D + I+W+ + S+ RA G G +
Sbjct: 140 ITVTDMKGNNSH----ILLSALKYPANVAVDPVERFIFWS--SEVAGSLYRADLDGVGVK 193
Query: 440 SIITTDITMPNALALDHQAEKLFW----GDARLDKIERCDYDGTNRIVLSKISPLHPFDM 495
+++ T + A++LD ++LFW + I CDYDG + + + + F M
Sbjct: 194 ALLETSEKI-TAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQHNLFAM 252
Query: 496 AVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKN----------IRRPMGIVAISDNLDA 545
+++G+ IF++ W + + ANK+TG+++ + + + P+ D+
Sbjct: 253 SLFGDRIFYSTWKMKTIWIANKHTGKDMVRINLHSSFVPLGELKVVHPLAQPKAEDDTWE 312
Query: 546 CAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
+ C+ GNC + +C C G L D + C C+ + C+ G
Sbjct: 313 PEQKLCKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLG 370
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 52/280 (18%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+ K+++++ + IE A MDG++RE ++ + +AVDWI + YW+D
Sbjct: 521 PVENKIYFAHTA--LKWIERANMDGSQRERLIEEG-----VDVPEGLAVDWIGRRFYWTD 573
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+++I + L G+ ++ + QP +AV P + LFW+++G P I + L G +
Sbjct: 574 RGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPMAKRLFWTDTGINPRIESSSLQGLGR 633
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISM------KPYGD 220
++A ++ IT+D ++ + + +I ++NL + P+
Sbjct: 634 LVIASSDLIWPSGITIDFLTDKLYWCDAKQS---VIEMANLDGSKRRRLTQNDVGHPFAV 690
Query: 221 SYLKDIKIYS---------------KD--------------------AQTGTNPCGVNNG 245
+ +D +S KD A+ G +PC NG
Sbjct: 691 AVFEDYVWFSDWAMPSVMRVNKRTGKDRVRLQGSMLKPSSLVVVHPLAKPGADPCLYQNG 750
Query: 246 GCAELCLYNGVSAVCACAHGVV-AQDGKSCSEYDAFIMYS 284
GC +C +A C+C G + A DGK+C D + +
Sbjct: 751 GCEHICKKRLGTAWCSCREGFMKASDGKTCLALDGHQLLA 790
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
+++W ++ +Q+ ++ F++G+++E V + +K + +A++WI + + WS+ +E
Sbjct: 87 RIYWVDLERQL--LQRVFLNGSRQERVCNIEKNVS------GMAINWINEEVIWSNQQEG 138
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD--GKKQTI 168
+I V + G ++L+S + P+ +AVDP ++FWS L RA LD G K +
Sbjct: 139 IITVTDMKGNNSHILLS-ALKYPANVAVDPVERFIFWSSEVAGSLY-RADLDGVGVKALL 196
Query: 169 LAQEIIMPIKDITLDLKFFSAFY 191
E I + LD + F Y
Sbjct: 197 ETSEKITAVSLDVLDKRLFWIQY 219
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRY 123
I DGT T++SQ+ + D + IY++ IE A + G R
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYA-----LDHDPVENKIYFAHTALKWIERANMDGSQRE 547
Query: 124 VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITL 182
LI GVD P LAVD +W++ GK LI R+ L+GK+ I+ +E I + I +
Sbjct: 548 RLIEEGVDVPEGLAVDWIGRRFYWTDRGK-SLIGRSDLNGKRSKIITKENISQPRGIAV 605
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 35/274 (12%)
Query: 18 LEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV 77
L G Q + + E N +S +A+ + ++ WSN + ++T+ M G +
Sbjct: 103 LNGSRQERVCNIEKN-------VSGMAINWINEEVIWSNQQEGIITV--TDMKGNNSHIL 153
Query: 78 VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALA 137
+S KYPA ++AVD + + I+WS + A L G L+ ++ +A++
Sbjct: 154 LSALKYPA------NVAVDPVERFIFWSSEVAGSLYRADLDGVGVKALLETS-EKITAVS 206
Query: 138 VDPESGYLFW---SESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFS--AFYR 192
+D LFW + G LI DG I P + + F FY
Sbjct: 207 LDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKH----PTQHNLFAMSLFGDRIFYS 262
Query: 193 NLSKGNIHIISLSNLSDVSTISMK----PYGD----SYLKDIKIYSKDAQTGTNPCGVNN 244
I I + D+ I++ P G+ L K + C +
Sbjct: 263 TWKMKTIWIANKHTGKDMVRINLHSSFVPLGELKVVHPLAQPKAEDDTWEPEQKLCKLRK 322
Query: 245 GGCAE-LCLYNGVSAVCACAHG-VVAQDGKSCSE 276
G C+ +C + S +C CA G +++D K C +
Sbjct: 323 GNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCED 356
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 23/388 (5%)
Query: 222 YLKDIKIYSKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQ-DGKSC--SEY 277
+ + + D +T + +NGGC++LCL + VS C C G Q D +SC S
Sbjct: 424 FCPEGSVLEADGKTCSGCSSPDNGGCSQLCLPLSPVSWECGCFPGYDLQLDKQSCAASGP 483
Query: 278 DAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGT 337
F++++ I +H D +D + S M + L +D ++++
Sbjct: 484 QPFLLFANSQDIRHMHF-DGTDYGTLL-----SQQMGMVFALDHDPVENKIYFAHTALKW 537
Query: 338 INSVFFNGSNHRVLLERQGSV-EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
I +GS L+E V EGLA +++ YWT + + I DL+ + I+
Sbjct: 538 IERANMDGSQRERLIEEGVDVPEGLAIDWIDRKFYWTDSGKSLIEGSDLNGKHREIIIKE 597
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
+ Q PRGI + R++WT+ + P I+ + G G I ++D+ P+ + +D+
Sbjct: 598 DISQ---PRGIAVHPMAKRLFWTDMGIN-PRIESSSLQGIGRLVIASSDLVWPSGITIDY 653
Query: 457 QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRAN 516
+KL+W D +L IE + DG+ R L++ HPF MAV+ + ++++DW + +++R +
Sbjct: 654 VTDKLYWCDTKLSVIEMANLDGSKRQRLAQNDVGHPFAMAVFEDHVWFSDWTMPSIIRVD 713
Query: 517 KYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFT 576
K TG+ LR ++ +P +V + L PC + NG C+ ICK + G C C
Sbjct: 714 KRTGKNRVRLRGSMLKPSSLVVVHP-LAKPGAQPCLYQNGGCEHICK-ERFGTAQCLCRE 771
Query: 577 GKVLMEDNRSC------TINTVCSEHDF 598
G V D + C I V SE D
Sbjct: 772 GFVKAPDGKMCLALNGHQIPAVGSEADL 799
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 138/299 (46%), Gaps = 19/299 (6%)
Query: 319 LSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDA 378
+ + Y ++ +++ D ++ + VF NG+ + + +V G+A +++ L W+ +
Sbjct: 79 MDFHYNKERIYWVDPERQLLQRVFLNGTRQERVCNIEKNVSGMAINWINEELIWSNQQEG 138
Query: 379 TINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGT 438
I D+ + R+++ L + P + ID + I+W++ + S+ RA +G
Sbjct: 139 IITVTDMKGNNS-RVLLRAL---NYPANVAIDPIERFIFWSSEVAVAGSLHRADLNGVEE 194
Query: 439 ESIITTDITMPNALALDHQAEKLFW----GDARLDKIERCDYDGTNRIVLSKISPLHPFD 494
+ ++ T + A++LD ++LFW D I C+YDG + + ++ + F
Sbjct: 195 KILLQTSERI-TAVSLDVLDKQLFWIQYSRDGSNSHIYSCNYDGGSVHLSKHLTQHNFFA 253
Query: 495 MAVYGEFIFWTDWVIHAVLRANKYTGEEVY--TLRKNIRRPMGIVAISDNLDACAKTP-- 550
M+++G IF++ W + ANK++G+++ L + P GI + L A++
Sbjct: 254 MSLFGNQIFYSTWKKKTIWIANKHSGKDMVRINLDSSFVPPGGIKVVHPLLQPKAESGTW 313
Query: 551 ------CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
C+ GNC ++ C+C G L +D + C C+ + C+ G
Sbjct: 314 APDQKLCKWKQGNCRGSTCGQDSKSYSCTCAEGYTLSQDGKYCEDVNECAFWNHGCTLG 372
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 52/270 (19%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+ K+++++ + IE A MDG++RE ++ + +A+DWI + YW+D
Sbjct: 523 PVENKIYFAHTA--LKWIERANMDGSQRERLIEEG-----VDVPEGLAIDWIDRKFYWTD 575
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+++IE + L G++R ++I + QP +AV P + LFW++ G P I + L G +
Sbjct: 576 SGKSLIEGSDLNGKHREIIIKEDISQPRGIAVHPMAKRLFWTDMGINPRIESSSLQGIGR 635
Query: 167 TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISM------KPYGD 220
++A ++ IT+D ++ + + +I ++NL + P+
Sbjct: 636 LVIASSDLVWPSGITIDYVTDKLYWCDT---KLSVIEMANLDGSKRQRLAQNDVGHPFAM 692
Query: 221 SYLKDIKIYSK---------DAQTGTN--------------------------PCGVNNG 245
+ +D +S D +TG N PC NG
Sbjct: 693 AVFEDHVWFSDWTMPSIIRVDKRTGKNRVRLRGSMLKPSSLVVVHPLAKPGAQPCLYQNG 752
Query: 246 GCAELCLYNGVSAVCACAHGVV-AQDGKSC 274
GC +C +A C C G V A DGK C
Sbjct: 753 GCEHICKERFGTAQCLCREGFVKAPDGKMC 782
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPK 108
K +++W + +Q+ ++ F++GT++E V + +K + +A++WI + + WS+ +
Sbjct: 85 KERIYWVDPERQL--LQRVFLNGTRQERVCNIEKNVS------GMAINWINEELIWSNQQ 136
Query: 109 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFW-SESGKIPLIARAGLDGKKQT 167
E +I V + G VL+ ++ P+ +A+DP ++FW SE + RA L+G ++
Sbjct: 137 EGIITVTDMKGNNSRVLLR-ALNYPANVAIDPIERFIFWSSEVAVAGSLHRADLNGVEEK 195
Query: 168 ILAQ--EIIMPIKDITLDLKFFSAFYRNLSKGNIHIIS 203
IL Q E I + LD + F Y N HI S
Sbjct: 196 ILLQTSERITAVSLDVLDKQLFWIQYSR-DGSNSHIYS 232
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRY 123
I DGT T++SQ+ + D + IY++ IE A + G R
Sbjct: 495 IRHMHFDGTDYGTLLSQQ-----MGMVFALDHDPVENKIYFAHTALKWIERANMDGSQRE 549
Query: 124 VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLD 183
LI GVD P LA+D +W++SGK LI + L+GK + I+ +E I + I +
Sbjct: 550 RLIEEGVDVPEGLAIDWIDRKFYWTDSGK-SLIEGSDLNGKHREIIIKEDISQPRGIAVH 608
Query: 184 LKFFSAFYRNL 194
F+ ++
Sbjct: 609 PMAKRLFWTDM 619
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 109/276 (39%), Gaps = 37/276 (13%)
Query: 18 LEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV 77
L G Q + + E N +S +A+ + ++ WSN + ++T+ M G +
Sbjct: 103 LNGTRQERVCNIEKN-------VSGMAINWINEELIWSNQQEGIITV--TDMKGNNSRVL 153
Query: 78 VSQKKYPAVTACNLHIAVDWIAQNIYWSD--PKENVIEVARLTGQYRYVLISGGVDQPSA 135
+ YPA ++A+D I + I+WS + A L G +L+ ++ +A
Sbjct: 154 LRALNYPA------NVAIDPIERFIFWSSEVAVAGSLHRADLNGVEEKILLQTS-ERITA 206
Query: 136 LAVDPESGYLFW---SESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR 192
+++D LFW S G I DG ++ + + + L FY
Sbjct: 207 VSLDVLDKQLFWIQYSRDGSNSHIYSCNYDGG--SVHLSKHLTQHNFFAMSLFGNQIFYS 264
Query: 193 NLSKGNIHIISLSNLSDVSTISM-----KPYGDSYLKDIKIYSKDAQTGT-----NPCGV 242
K I I + + D+ I++ P G + + A++GT C
Sbjct: 265 TWKKKTIWIANKHSGKDMVRINLDSSFVPPGGIKVVH--PLLQPKAESGTWAPDQKLCKW 322
Query: 243 NNGGC-AELCLYNGVSAVCACAHG-VVAQDGKSCSE 276
G C C + S C CA G ++QDGK C +
Sbjct: 323 KQGNCRGSTCGQDSKSYSCTCAEGYTLSQDGKYCED 358
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus GN=Egf PE=1 SV=2
Length = 1133
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 177/366 (48%), Gaps = 18/366 (4%)
Query: 228 IYSKDAQTGTNPCGVNNGGCAELCLYNGVSA-VCACAHGVVAQ-DGKSCSEY---DAFIM 282
+ KD +T T +NGGC+++CL +++ C C G Q D KSC+ F++
Sbjct: 429 VLGKDGKTCTGCSFSDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAASMGPQPFLL 488
Query: 283 YSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVF 342
++ I +H D +D + S M + L YD ++++ I
Sbjct: 489 FANSQDIRHMHF-DGTDYKTLL-----SRQMGMVFALDYDPVESKIYFAQTALKWIERAN 542
Query: 343 FNGSN-HRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQH 401
+GS R + E + EGLA +++ +YWT + + I DL Q I+ +
Sbjct: 543 LDGSQRERRITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESI--- 599
Query: 402 DKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKL 461
+PRGI + R++WT+ P I+ + G I ++++ P+ +A+D+ + L
Sbjct: 600 SRPRGIAVHPKARRLFWTD-TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTL 658
Query: 462 FWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGE 521
+W D +L IE D DG+ R L++ HPF +AV+ + ++++DW I +V+R NK TG+
Sbjct: 659 YWCDTKLSVIEMADLDGSKRRRLTQNDVGHPFSLAVFEDHVWFSDWAIPSVIRVNKRTGQ 718
Query: 522 EVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLM 581
LR ++ +P +V + L PC H NG C+ IC+ + G C C G V
Sbjct: 719 NRVRLRGSMLKPSSLVVVHP-LAKPGADPCLHRNGGCEHICQ-ESLGTAQCLCREGFVKA 776
Query: 582 EDNRSC 587
D + C
Sbjct: 777 PDGKMC 782
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 56/303 (18%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+ K++++ + IE A +DG++RE +++ +AVDWI + IYW+D
Sbjct: 523 PVESKIYFAQTA--LKWIERANLDGSQRERRITEG-----VDTPEGLAVDWIGRRIYWTD 575
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
++VIE + L+G++ ++I + +P +AV P++ LFW+++G P I + L G +
Sbjct: 576 SGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPKARRLFWTDTGMSPRIESSSLQGSDR 635
Query: 167 TILAQEIIMPIKDITLDLKFFSAFY------------------RNLSKGNI-HIISLSNL 207
T++A ++ I +D + ++ R L++ ++ H SL+
Sbjct: 636 TLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMADLDGSKRRRLTQNDVGHPFSLAVF 695
Query: 208 SD---------VSTISM-KPYGDSYLK---------DIKIYSKDAQTGTNPCGVNNGGCA 248
D S I + K G + ++ + + A+ G +PC NGGC
Sbjct: 696 EDHVWFSDWAIPSVIRVNKRTGQNRVRLRGSMLKPSSLVVVHPLAKPGADPCLHRNGGCE 755
Query: 249 ELCLYNGVSAVCACAHGVV-AQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESI 307
+C + +A C C G V A DGK C + D I D +DL+ S+
Sbjct: 756 HICQESLGTAQCLCREGFVKAPDGKMC----------LTRKDDQILAGDNADLSKEVASL 805
Query: 308 RNS 310
NS
Sbjct: 806 DNS 808
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 129/303 (42%), Gaps = 25/303 (8%)
Query: 317 IELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNN 376
+ + + YK + L++ D+++ + VFFNGS + + +V GLA ++ + T
Sbjct: 78 VVMDFHYKEERLYWVDLERQLLQRVFFNGSGQETVCKVDKNVSGLAINWIDGEILRTDRW 137
Query: 377 DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF 436
I D++ ++ V L +P I +D + I+W++ + ++ RA G
Sbjct: 138 KGVITVTDMNGNNSR----VLLSSLKRPANILVDPTERLIFWSSVVTG--NLHRADLGGM 191
Query: 437 GTESIITTDITMPNALALDHQAEKLFWG-DARLDK---IERCDYDGTNRIVLSKISPLHP 492
++++ + + L LD ++LFW D R I CDY+G + + +
Sbjct: 192 DVKTLLEAPERI-SVLILDILDKRLFWAQDGREGSHGYIHSCDYNGGSIHHIRHQARHDL 250
Query: 493 FDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI------RRPMGIVAI------S 540
MA++G+ I ++ A+ A+K+TG+ V +R N+ R + +V +
Sbjct: 251 LTMAIFGDKILYSALKEKAIWIADKHTGKNV--VRVNLDPASVPPRELRVVHLHAQPGTE 308
Query: 541 DNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKC 600
+ A C+ G C + +C G L D + C C+ + C
Sbjct: 309 NRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYTLSRDRKYCEDVNECALQNHGC 368
Query: 601 SDG 603
+ G
Sbjct: 369 TLG 371
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
+++W ++ +Q+ ++ F +G+ +ETV K + +A++WI I +D +
Sbjct: 88 RLYWVDLERQL--LQRVFFNGSGQETVCKVDKNVS------GLAINWIDGEILRTDRWKG 139
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE--SGKIPLIARAGLDGKKQTI 168
VI V + G VL+S + +P+ + VDP +FWS +G + G+D K
Sbjct: 140 VITVTDMNGNNSRVLLSS-LKRPANILVDPTERLIFWSSVVTGNLHRADLGGMDVKTLLE 198
Query: 169 LAQEIIMPIKDITLDLKFFSAFYRNLSKGNIH--------IISLSNLSDVSTISMKPYGD 220
+ I + I DI F++ R S G IH I + + + ++M +GD
Sbjct: 199 APERISVLILDILDKRLFWAQDGREGSHGYIHSCDYNGGSIHHIRHQARHDLLTMAIFGD 258
Query: 221 ----SYLKDIKIYSKDAQTGTNPCGVN 243
S LK+ I+ D TG N VN
Sbjct: 259 KILYSALKEKAIWIADKHTGKNVVRVN 285
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 186/434 (42%), Gaps = 72/434 (16%)
Query: 275 SEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ 334
+E + FI+Y+ I + + P +R + + L +DY+ L++SD+
Sbjct: 755 AEENEFILYAVRKSIYRYDLASGATEQLPLTGLRAA------VALDFDYEHNCLYWSDLA 808
Query: 335 KGTINSVFFNGSNHRVLLERQG--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ- 391
I + NGS + ++ G +VE LA+E + LYW DA KI++ +P
Sbjct: 809 LDVIQRLCLNGSTGQEVIINSGLETVEALAFEPLSQLLYWV---DAGFKKIEVANPDGDF 865
Query: 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNA 451
R+ +V D+PR + + + ++WT+W P I R+ G +++ D+ PN
Sbjct: 866 RLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSNMDGSAAYHLVSEDVKWPNG 925
Query: 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHA 511
+++D Q ++W DA L+ IER + G R V+ P HP+ +AV+ I+W DW +
Sbjct: 926 ISVDDQW--IYWTDAYLECIERITFSGQQRSVILDNLP-HPYAIAVFKNEIYWDDWSQLS 982
Query: 512 VLRANKYTGEEVYTLRKNIRRPMGIVAI----SDNLDACAKTPCRHL---NGNCDDICKL 564
+ RA+KY+G ++ L + M + + +AC PC L N C+
Sbjct: 983 IFRASKYSGSQMEILANQLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPKANNSRSCRC 1042
Query: 565 DE--------TGQVVCSCFTGKVL------------------------------------ 580
E +G ++C C G L
Sbjct: 1043 PEDVSSSVLPSGDLMCDCPQGYQLKNNTCVKQENTCLRNQYRCSNGNCINSIWWCDFDND 1102
Query: 581 ---MEDNRSCTINTVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
M D R+C + F+C + G CIP + CD +C D SDE +C M CR
Sbjct: 1103 CGDMSDERNCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDES--HCEMHQCRS 1160
Query: 637 GYFKCDNNKCILSS 650
+ C + CI SS
Sbjct: 1161 DEYNCSSGMCIRSS 1174
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 46/253 (18%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++WS++ V I+ ++G+ + V+ V A +A + ++Q +YW D
Sbjct: 802 LYWSDLALDV--IQRLCLNGSTGQEVIINSGLETVEA----LAFEPLSQLLYWVDAGFKK 855
Query: 112 IEVARLTGQYRYVLISGGV-DQPSALAVDPESGYLFWSESGKI-PLIARAGLDGKKQTIL 169
IEVA G +R +++ V D+P AL + P+ G +FW++ G + P I R+ +DG L
Sbjct: 856 IEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSNMDGSAAYHL 915
Query: 170 AQEIIMPIKDITLDLK-------FFSAFYRNLSKGNIHIISLSNL--------------- 207
E + I++D + + R G + L NL
Sbjct: 916 VSEDVKWPNGISVDDQWIYWTDAYLECIERITFSGQQRSVILDNLPHPYAIAVFKNEIYW 975
Query: 208 ---SDVSTISMKPYGDSYLK----------DIKIYSKDAQTGTNPCGVNNGGCAELCLYN 254
S +S Y S ++ D+KI+ K TG+N C C+ LCL
Sbjct: 976 DDWSQLSIFRASKYSGSQMEILANQLTGLMDMKIFYKGKNTGSNACVPR--PCSLLCLPK 1033
Query: 255 G-VSAVCACAHGV 266
S C C V
Sbjct: 1034 ANNSRSCRCPEDV 1046
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
KI V N +G+++ TI+ ++S L + ++ + P +G MFW++ I + MDG
Sbjct: 855 KIEVANPDGDFRLTIV-----NSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSNMDG 909
Query: 72 TKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV 130
+ +VS+ K+P I+VD Q IYW+D IE +GQ R V++ +
Sbjct: 910 SAAYHLVSEDVKWPN------GISVD--DQWIYWTDAYLECIERITFSGQQRSVILD-NL 960
Query: 131 DQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFF 187
P A+AV ++W + ++ + + G + ILA ++ +D+K F
Sbjct: 961 PHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILANQLTG-----LMDMKIF 1010
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 583 DNRSCT-INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D +CT I C +F+C +G CIP CD +C D SDE + C + C F+C
Sbjct: 1188 DEANCTAIYHTCEASNFQCRNGHCIPQRWACDGDTDCQDGSDEDPVNCE-KKCNG--FRC 1244
Query: 642 DNNKCILSS 650
N CI SS
Sbjct: 1245 PNGTCIPSS 1253
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C ++ C ++ CS GMCI + CD +C D SDE C F+C
Sbjct: 1149 DESHCEMHQ-CRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCEASNFQCR 1207
Query: 643 NNKCI 647
N CI
Sbjct: 1208 NGHCI 1212
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 593 CSEH-DFKCSDGMCIPFNQTCDRVYNCHDKSDEG------ILYCAM---RDCRPGYFKCD 642
CS + F+C +G CIP CDR +C D SDE IL + C P Y++C
Sbjct: 1368 CSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS 1427
Query: 643 NNKCILSS 650
+ C++ +
Sbjct: 1428 SGTCVMDT 1435
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR--DC-RPGYFKCDNNK 645
+ VC E F+C +G+CI CD + +C D SDE +C R F+C+N
Sbjct: 1321 FHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGH 1380
Query: 646 CI 647
CI
Sbjct: 1381 CI 1382
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDE 624
F+C +G CIP ++ CD + +C D SDE
Sbjct: 1242 FRCPNGTCIPSSKHCDGLRDCSDGSDE 1268
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 583 DNRSCTINTV--CSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDE 624
D +C ++ C +F+C DG CI ++ CD +C D+SDE
Sbjct: 1502 DEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2 SV=1
Length = 2213
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 185/434 (42%), Gaps = 72/434 (16%)
Query: 275 SEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ 334
+E + FI+Y+ I + + P +R + + L +DY+ L++SD+
Sbjct: 754 AEENEFILYATRKSIHRYDLASGTTEQLPLTGLRAA------VALDFDYEHNCLYWSDLA 807
Query: 335 KGTINSVFFNGSNHR--VLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ- 391
I + NGS + ++ +VE LA+E + LYW DA KI++ +P
Sbjct: 808 LDVIQRLCLNGSTGQEVIINSDLETVEALAFEPLSQLLYWV---DAGFKKIEVANPDGDF 864
Query: 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNA 451
R+ VV D+PR + + + ++WT+W P I R+ G +++ D+ PN
Sbjct: 865 RLTVVNSSVLDRPRALVLVPQEGIMFWTDWGDLKPGIYRSNMDGSAAYRLVSEDVKWPNG 924
Query: 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHA 511
+++D Q ++W DA LD IER + G R V+ P HP+ +AV+ I+W DW +
Sbjct: 925 ISVDDQW--IYWTDAYLDCIERITFSGQQRSVILDRLP-HPYAIAVFKNEIYWDDWSQLS 981
Query: 512 VLRANKYTGEEVYTLRKNIRRPMGIVAI----SDNLDACAKTPCRHL---NGNCDDICKL 564
+ RA+KY+G ++ L + M + + +AC PC L N C+
Sbjct: 982 IFRASKYSGSQMEILASQLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPRANNSKSCRC 1041
Query: 565 DE--------TGQVVCSCFTGKVL------------------------------------ 580
+ +G ++C C G L
Sbjct: 1042 PDGVASSVLPSGDLMCDCPKGYELKNNTCVKEEDTCLRNQYRCSNGNCINSIWWCDFDND 1101
Query: 581 ---MEDNRSCTINTVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636
M D ++C + F+C + G CIP + CD +C D SDE +C M CR
Sbjct: 1102 CGDMSDEKNCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE--RHCEMHQCRS 1159
Query: 637 GYFKCDNNKCILSS 650
+ C + CI SS
Sbjct: 1160 DEYNCSSGMCIRSS 1173
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++WS++ V I+ ++G+ + V+ V A +A + ++Q +YW D
Sbjct: 801 LYWSDLALDV--IQRLCLNGSTGQEVIINSDLETVEA----LAFEPLSQLLYWVDAGFKK 854
Query: 112 IEVARLTGQYRYVLISGGV-DQPSALAVDPESGYLFWSESGKI-PLIARAGLDGKKQTIL 169
IEVA G +R +++ V D+P AL + P+ G +FW++ G + P I R+ +DG L
Sbjct: 855 IEVANPDGDFRLTVVNSSVLDRPRALVLVPQEGIMFWTDWGDLKPGIYRSNMDGSAAYRL 914
Query: 170 AQEIIMPIKDITLDLK-------FFSAFYRNLSKGNIHIISLSNL--------------- 207
E + I++D + + R G + L L
Sbjct: 915 VSEDVKWPNGISVDDQWIYWTDAYLDCIERITFSGQQRSVILDRLPHPYAIAVFKNEIYW 974
Query: 208 ---SDVSTISMKPYGDSYLK----------DIKIYSKDAQTGTNPCGVNNGGCAELCLYN 254
S +S Y S ++ D+KI+ K TG+N C C+ LCL
Sbjct: 975 DDWSQLSIFRASKYSGSQMEILASQLTGLMDMKIFYKGKNTGSNACVPR--PCSLLCLPR 1032
Query: 255 G-VSAVCACAHGVVA 268
S C C GV +
Sbjct: 1033 ANNSKSCRCPDGVAS 1047
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 22/177 (12%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
KI V N +G+++ T++ ++S L + ++ + P +G MFW++ I + MDG
Sbjct: 854 KIEVANPDGDFRLTVV-----NSSVLDRPRALVLVPQEGIMFWTDWGDLKPGIYRSNMDG 908
Query: 72 TKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV 130
+ +VS+ K+P I+VD Q IYW+D + IE +GQ R V++ +
Sbjct: 909 SAAYRLVSEDVKWPN------GISVD--DQWIYWTDAYLDCIERITFSGQQRSVILD-RL 959
Query: 131 DQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFF 187
P A+AV ++W + ++ + + G + ILA ++ +D+K F
Sbjct: 960 PHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILASQLTG-----LMDMKIF 1009
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 583 DNRSCT-INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D +CT I C +F+C +G CIP CD +C D SDE C + C F+C
Sbjct: 1187 DEANCTAIYHTCEASNFQCRNGHCIPQRWACDGDADCQDGSDEDPANCE-KKCNG--FRC 1243
Query: 642 DNNKCILSS 650
N CI S+
Sbjct: 1244 PNGTCIPST 1252
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 584 NRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR--DC-RPGYFK 640
+R + VC E F+C +G+CI CD + +C D SDE +C R F+
Sbjct: 1315 SRDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFR 1374
Query: 641 CDNNKCI 647
CDN CI
Sbjct: 1375 CDNGHCI 1381
Score = 40.0 bits (92), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 593 CSEH-DFKCSDGMCIPFNQTCDRVYNCHDKSDEG------ILYC---AMRDCRPGYFKCD 642
CS + F+C +G CIP CDR +C D SDE +L A C P Y++C
Sbjct: 1367 CSRYFQFRCDNGHCIPNRWKCDRENDCGDWSDEKDCGDSHVLPSTTPAPSTCLPNYYRCG 1426
Query: 643 NNKCILSS 650
C++ +
Sbjct: 1427 GGACVIDT 1434
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN-NKCILSS 650
F+C +G CIP + CD +++C D SDE +C R F C N +C+ S
Sbjct: 1241 FRCPNGTCIPSTKHCDGLHDCSDGSDE--QHCEPLCTRFMDFVCKNRQQCLFHS 1292
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 582 EDNRSCTINTV--CSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDE 624
+D +C ++ C +FKC DG CI ++ CD +C D+SDE
Sbjct: 1500 QDEANCPTHSTLTCMSWEFKCEDGEACIVLSERCDGFLDCSDESDE 1545
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 192/434 (44%), Gaps = 78/434 (17%)
Query: 275 SEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ 334
+E + FI+Y+ SIH + DL S ++ + L +DY+ L+++D+
Sbjct: 662 AEENEFILYATRY---SIH---RYDLASGLSQELPLAGLRGAVALDFDYEHNCLYWADVT 715
Query: 335 KGTINSVFFNGSNHRVLLERQG--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ- 391
I + NGS+ + ++ G +VE LA+E + LYW +A I KI++ +P
Sbjct: 716 LDIIQRLCLNGSSGQEIIISTGLETVEALAFEPLSQLLYWV---NAGIPKIEVANPDGDL 772
Query: 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNA 451
R+ V+ ++PR + + + ++WT+W P I R+ G I++ + PN
Sbjct: 773 RLTVLNSSVLERPRALALVPREGLMFWTDWGDSRPGIYRSDMDGSLAACIVSEGVRWPNG 832
Query: 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHA 511
+++D ++W +A +D+IER D++G R V+ P HP+ +AV+ I+W DW +
Sbjct: 833 ISVDDHW--IYWTEAYMDRIERVDFNGLQRSVILDSLP-HPYAIAVFKNEIYWNDWSQLS 889
Query: 512 VLRANKYTGEEVYTLRKNIRRPMGIVAI-------SDNLDACAKTPCRHL---NGNCDDI 561
+ RA+K +G + TL + R GI+ + + +AC PC L N
Sbjct: 890 IFRASKNSGSRMETL---VGRLYGIMDMKIFYRGKTTGQNACIAHPCSLLCLPKSNNGRS 946
Query: 562 CKLDE--------TGQVVCS-------------------------CFTGKVL-------- 580
CK E +G+V C CF G +
Sbjct: 947 CKCPEGVSSTVLPSGEVKCDCPHGYSMKNNTCVKEENTCLPNQYRCFNGNCINSIWQCDN 1006
Query: 581 ------MEDNRSCTINTVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRD 633
M D ++C +E F+C + G CIP + CD +C D SDE +C
Sbjct: 1007 NNDCGDMSDEKNCPTTVCDAETQFRCRESGTCIPLSYKCDLEDDCGDNSDES--HCEAHQ 1064
Query: 634 CRPGYFKCDNNKCI 647
CR F C + CI
Sbjct: 1065 CRKDEFSCSSGMCI 1078
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 56/258 (21%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W++VT + I+ ++G+ + ++ V A +A + ++Q +YW +
Sbjct: 709 LYWADVTLDI--IQRLCLNGSSGQEIIISTGLETVEA----LAFEPLSQLLYWVNAGIPK 762
Query: 112 IEVARLTGQYRYVLISGGV-DQPSALAVDPESGYLFWSESG-KIPLIARAGLDGKKQTIL 169
IEVA G R +++ V ++P ALA+ P G +FW++ G P I R+ +DG +
Sbjct: 763 IEVANPDGDLRLTVLNSSVLERPRALALVPREGLMFWTDWGDSRPGIYRSDMDGSLAACI 822
Query: 170 AQEIIMPIKDITLDLKF---------------FSAFYRNL-------------------- 194
E + I++D + F+ R++
Sbjct: 823 VSEGVRWPNGISVDDHWIYWTEAYMDRIERVDFNGLQRSVILDSLPHPYAIAVFKNEIYW 882
Query: 195 ---SKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELC 251
S+ +I S ++ S + T+ + YG + D+KI+ + TG N C + C+ LC
Sbjct: 883 NDWSQLSIFRASKNSGSRMETLVGRLYG---IMDMKIFYRGKTTGQNACIAHP--CSLLC 937
Query: 252 L---YNGVSAVCACAHGV 266
L NG S C C GV
Sbjct: 938 LPKSNNGRS--CKCPEGV 953
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 12 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71
KI V N +G+ + T+L ++S L + ++A+ P +G MFW++ I + MDG
Sbjct: 762 KIEVANPDGDLRLTVL-----NSSVLERPRALALVPREGLMFWTDWGDSRPGIYRSDMDG 816
Query: 72 TKRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV 130
+ +VS+ ++P + + H W IYW++ + IE G R V++ +
Sbjct: 817 SLAACIVSEGVRWPNGISVDDH----W----IYWTEAYMDRIERVDFNGLQRSVILD-SL 867
Query: 131 DQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAF 190
P A+AV ++W++ ++ + + G + L + +D+K F
Sbjct: 868 PHPYAIAVFKNE--IYWNDWSQLSIFRASKNSGSRMETLVGRLYG-----IMDMKI---F 917
Query: 191 YRNLSKGNIHIIS 203
YR + G I+
Sbjct: 918 YRGKTTGQNACIA 930
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +CT+ C F+C +G CIP CD +C D SDE C + C F+C
Sbjct: 1095 DEANCTMFRTCEASSFQCLNGHCIPQRWACDGDADCQDGSDEDPTICEKK-CNG--FQCP 1151
Query: 643 NNKCILSS 650
N CI +S
Sbjct: 1152 NGTCISTS 1159
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 583 DNRSC---TINTVCSEH-DFKCSDGMCIPFNQTCDRVYNCHDKSDEG---------ILYC 629
D SC T CS + F+C +G CIP CD +C D SDE I
Sbjct: 1262 DEASCENPTDAPTCSRYYQFQCGNGHCIPNQWKCDGENDCGDWSDEKECEGSPLLPITTA 1321
Query: 630 AMRDCRPGYFKCDNNKCILSS 650
C P +F+C + CI +S
Sbjct: 1322 VPPTCLPNHFRCGSGACITNS 1342
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 16/74 (21%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGI---------------LYCAMRD 633
+ C + F+C++G+CI CD + +C D SDE C
Sbjct: 1228 FHRTCDQFSFQCANGVCISLVWKCDGMDDCGDYSDEASCENPTDAPTCSRYYQFQCGNGH 1287
Query: 634 CRPGYFKCDN-NKC 646
C P +KCD N C
Sbjct: 1288 CIPNQWKCDGENDC 1301
>sp|P01132|EGF_MOUSE Pro-epidermal growth factor OS=Mus musculus GN=Egf PE=1 SV=2
Length = 1217
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 173/364 (47%), Gaps = 15/364 (4%)
Query: 228 IYSKDAQTGTNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQ-DGKSCSEYDAFIMYSR 285
+ +D +T T +NGGC+++CL S C C G Q D KSC+ +
Sbjct: 434 VLGRDGKTCTGCSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLF 493
Query: 286 VNRIDSIHMT-DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFN 344
N D HM D +D + S M + L YD ++++ I +
Sbjct: 494 ANSQDIRHMHFDGTDYK-----VLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMD 548
Query: 345 GSN-HRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDK 403
GS R++ E ++EGLA +++ +YWT + + + DL S K RI++ + +
Sbjct: 549 GSQRERLITEGVDTLEGLALDWIGRRIYWTDSGKSVVGGSDL-SGKHHRIIIQE--RISR 605
Query: 404 PRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFW 463
PRGI + R++WT+ P I+ A G I ++++ P+ + +D+ + L+W
Sbjct: 606 PRGIAVHPRARRLFWTDVGMS-PRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYW 664
Query: 464 GDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEV 523
D + IE + DG+ R L + HPF +AV+ + ++ +DW I +V+R NK TG+
Sbjct: 665 CDTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDHLWVSDWAIPSVIRVNKRTGQNR 724
Query: 524 YTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED 583
L+ ++ +P +V + L PC + NG C+ IC+ + G C C G V D
Sbjct: 725 VRLQGSMLKPSSLVVVHP-LAKPGADPCLYRNGGCEHICQ-ESLGTARCLCREGFVKAWD 782
Query: 584 NRSC 587
+ C
Sbjct: 783 GKMC 786
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 57/307 (18%)
Query: 47 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSD 106
PV+ K++++ + IE A MDG++RE ++++ V +A+DWI + IYW+D
Sbjct: 527 PVESKIYFAQTA--LKWIERANMDGSQRERLITE----GVDTLE-GLALDWIGRRIYWTD 579
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
++V+ + L+G++ ++I + +P +AV P + LFW++ G P I A L G +
Sbjct: 580 SGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPRARRLFWTDVGMSPRIESASLQGSDR 639
Query: 167 TILAQEIIMPIKDITLDLKFFSAFY------------------RNLSKGNI-HIISLSNL 207
++A ++ IT+D + ++ R L + ++ H SL+
Sbjct: 640 VLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVF 699
Query: 208 SDVSTIS----------MKPYGDSYLK---------DIKIYSKDAQTGTNPCGVNNGGCA 248
D +S K G + ++ + + A+ G +PC NGGC
Sbjct: 700 EDHLWVSDWAIPSVIRVNKRTGQNRVRLQGSMLKPSSLVVVHPLAKPGADPCLYRNGGCE 759
Query: 249 ELCLYNGVSAVCACAHGVV-AQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESI 307
+C + +A C C G V A DGK C D I+ + +DL+ S+
Sbjct: 760 HICQESLGTARCLCREGFVKAWDGKMCLPQDYPILSG-----------ENADLSKEVTSL 808
Query: 308 RNSTMMK 314
NST +
Sbjct: 809 SNSTQAE 815
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 141/343 (41%), Gaps = 67/343 (19%)
Query: 318 ELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNND 377
++ YK++ L++ D+++ + VF NG+ + + V GLA +++ + + W +
Sbjct: 85 DMDIHYKKERLYWVDVERQVLLRVFLNGTGLEKVCNVERKVSGLAIDWIDDEVLWVDQQN 144
Query: 378 ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFG 437
I D+ K R+++ L P I +D + ++W++ + S+ RA G
Sbjct: 145 GVITVTDMTG-KNSRVLLSSL---KHPSNIAVDPIERLMFWSSEVTG--SLHRAHLKGVD 198
Query: 438 TESIITTDITMPNALALDHQAEKLFW----GDARLDKIERCDYDGTNRIVLSKISPLHPF 493
++++ T + L LD ++LFW G+ I CDY+G + ++ +
Sbjct: 199 VKTLLETGGI--SVLTLDVLDKRLFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLS 256
Query: 494 DMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIR----------------RPMGIV 537
MA +G+ IF++ A+ ANK+TG++ T+R N+ +P
Sbjct: 257 SMAFFGDRIFYSVLKSKAIWIANKHTGKD--TVRINLHPSFVTPGKLMVVHPRAQPRTED 314
Query: 538 AISD-------------NLDACAKTPCRHLNG------------NCDDI---------CK 563
A D C + P H + C+D+ C
Sbjct: 315 AAKDPDPELLKQRGRPCRFGLCERDPKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCT 374
Query: 564 L---DETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDG 603
L + G C+C TG VL+ D + C C + KCS G
Sbjct: 375 LGCENTPGSYHCTCPTGFVLLPDGKQCHELVSCPGNVSKCSHG 417
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 49 KGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPK 108
K +++W +V +QV+ F++GT E V + ++ V+ +A+DWI + W D +
Sbjct: 92 KERLYWVDVERQVLL--RVFLNGTGLEKVCNVER--KVSG----LAIDWIDDEVLWVDQQ 143
Query: 109 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE--SGKIPLIARAGLDGKKQ 166
VI V +TG+ VL+S + PS +AVDP +FWS +G + G+D K
Sbjct: 144 NGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPIERLMFWSSEVTGSLHRAHLKGVDVK-- 200
Query: 167 TILAQEIIMPIKDITLDLKFF---------SAFYR--NLSKGNIHIISLSNLSDVSTISM 215
T+L I + LD + F A+ + G++ +I +S+++
Sbjct: 201 TLLETGGISVLTLDVLDKRLFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAF 260
Query: 216 KPYGD----SYLKDIKIYSKDAQTGTNPCGVN 243
+GD S LK I+ + TG + +N
Sbjct: 261 --FGDRIFYSVLKSKAIWIANKHTGKDTVRIN 290
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDW--IAQNIYWSDPKENVIEVARLTGQY 121
I DGT + ++S++ + A+D+ + IY++ IE A + G
Sbjct: 499 IRHMHFDGTDYKVLLSRQM-------GMVFALDYDPVESKIYFAQTALKWIERANMDGSQ 551
Query: 122 RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDIT 181
R LI+ GVD LA+D ++W++SGK ++ + L GK I+ QE I + I
Sbjct: 552 RERLITEGVDTLEGLALDWIGRRIYWTDSGK-SVVGGSDLSGKHHRIIIQERISRPRGIA 610
Query: 182 LDLKFFSAFYRN-----------LSKGNIHIISLSNLSDVSTISM 215
+ + F+ + L + +I+ SNL + S I++
Sbjct: 611 VHPRARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITI 655
>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila melanogaster GN=yl PE=1
SV=2
Length = 1984
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 152/656 (23%), Positives = 264/656 (40%), Gaps = 88/656 (13%)
Query: 34 TSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHI 93
LSK+ I V ++W+N+ + +I A DG+ E +++ +
Sbjct: 427 AGNLSKV--IGVAYDGSHIYWTNIQNEAESIVKANGDGSNAEILLTSGLDAPED-----L 479
Query: 94 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKI 153
AVDW+ QNIY+SD I V G VL++ V QP +LAV P+ G +FW++ G+
Sbjct: 480 AVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDWGEK 539
Query: 154 PLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTI 213
P+I RA +DG + + + I I LD+ ++ + G++ + + +
Sbjct: 540 PMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVL 599
Query: 214 S---MKPYGDSYL----------------------KDIKIYSKD-----------AQTGT 237
PYG + KD +I +KD A+
Sbjct: 600 DGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHPAKQPN 659
Query: 238 NPCGVNNGGCAELCLY-----NGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDS 291
+P G N C+ LCL G S CAC G+ +A D + C +M R
Sbjct: 660 SPHGCENATCSHLCLLAEPEIGGHS--CACPDGMRLAPDHRRC-----MLMEKRQRLFIG 712
Query: 292 IHMTDKSDLNSPF---ESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH 348
+ ++ F + ++ T+ I E+ Y+ +L +D + I
Sbjct: 713 LGQVLLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESHES 772
Query: 349 RVLLERQ-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGI 407
VL+ G+V LA++++ LYW A I + L + R ++ + P G+
Sbjct: 773 NVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQT--RHRALIRFFPGQEVPIGL 830
Query: 408 DIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALAL--DHQAEKLFWGD 465
+ + +Y I + SG G + + D + + L D++ + +FW D
Sbjct: 831 TVMPAEGYLYVVLKAKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSD 890
Query: 466 ARLDKIERCDYDGTNRIVLSKI---SPLHPFDMAVYGEFIFWTDW---VIHAVLRANKYT 519
+ L +I +Y R+ S+I P+ +A+ +FW + I+ ++N
Sbjct: 891 SDLGRISYSNY----RVPHSQIFRGKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGP 946
Query: 520 GEEVYTLRKN----------IRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQ 569
+ + + K+ + P GI + + PC+ NG C IC +
Sbjct: 947 RKVIDIMEKDDPAAIMPYVPVATPNGIPLAASSPVGQESHPCQQQNGGCSHICVGEGPYH 1006
Query: 570 VVCSCFTGKVLME-DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
+C C G V + NR+C C +F+C G C+ N C+ +C D SDE
Sbjct: 1007 SICLCPAGFVYRDAGNRTCVEALDC---EFRCHSGECLTMNHRCNGRRDCVDNSDE 1059
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 163/356 (45%), Gaps = 25/356 (7%)
Query: 247 CAELCLYNGVSAVCACAHG-VVAQDGKSC-------SEYDAFIMYSRVNRIDSIHMTDKS 298
C++ C C C G ++ +D ++C E ++Y+ I +H+ + +
Sbjct: 359 CSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLREDN 418
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG--SNHRVLLERQ- 355
N ++ N + +I ++YD +++++IQ + V NG SN +LL
Sbjct: 419 VRNHVYQVAGN---LSKVIGVAYDGSH--IYWTNIQNEAESIVKANGDGSNAEILLTSGL 473
Query: 356 GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSR 415
+ E LA +++ +Y++ D + I + S V+ +PR + +
Sbjct: 474 DAPEDLAVDWLTQNIYFS---DNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGL 530
Query: 416 IYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCD 475
++WT+W P I RA G + I++ +I PN +ALD ++++W DA+L ++
Sbjct: 531 MFWTDWGEK-PMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVR 589
Query: 476 YDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMG 535
DGT R + HP+ +A++ + ++W+DW +V +K++G++ L K+ R +
Sbjct: 590 PDGTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKD--RTIY 647
Query: 536 IVAISDNLDACAKTPCRHLNGNCDDICKL--DETGQVVCSCFTGKVLMEDNRSCTI 589
V I +P N C +C L E G C+C G L D+R C +
Sbjct: 648 AVHIYHPAKQ-PNSPHGCENATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCML 702
Score = 39.7 bits (91), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 112/297 (37%), Gaps = 39/297 (13%)
Query: 92 HIAVDWIAQNIYW-------SDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGY 144
H+AVD I++ + I +ARL G R +L+ +AL DP
Sbjct: 1580 HLAVDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQL 1639
Query: 145 LFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISL 204
L++ + + + R K + EI++ + + S + + N I+
Sbjct: 1640 LYFVDQ-HMRTLERISYRLKTGPMRRPEIMLQKSNALMHPSGLSVY-----ENNAFIV-- 1691
Query: 205 SNLSDVSTISMKPYGDSYLKDIKI------------YSKDAQTGTNPCGVNNGGCAELCL 252
NL V + YG I I S+ Q ++PC + C LCL
Sbjct: 1692 -NLGSVEAVQCALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCA--HAHCHGLCL 1748
Query: 253 YNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFE------S 306
C C + +VA+ G+ C + + + + ++S+ + + + N F
Sbjct: 1749 QADYGYECMCGNRLVAE-GERCP-HGSGNEVAVLGAVNSLELEHEHEQNGHFHWLMALFV 1806
Query: 307 IRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAY 363
+ +++ + + Y Y+++ +I N + G + LE + + G+ +
Sbjct: 1807 LAAGSLIAGLGYMYYQYRQRGHTDLNINMHFQNPLATLGGT-KAFLEHERAEAGVGF 1862
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 588 TINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGY-FKC 641
+ +T C F+C DG CI + CD +C D SDE L C R CRP + F C
Sbjct: 85 SADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDE--LDCDYRLCRPPHWFPC 137
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 22/84 (26%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGM-CIPFNQTCDRVYNCHDKSDEGILYCAM--------- 631
ED C VCS ++FKC G CI CD +C D SDE L C +
Sbjct: 1274 EDEADC--GDVCSIYEFKCRSGRECIRREFRCDGQKDCGDGSDE--LSCELEKGHHNQSQ 1329
Query: 632 --------RDCRPGYFKCDNNKCI 647
R CRP F C + +C+
Sbjct: 1330 IQPWSTSSRSCRPHLFDCQDGECV 1353
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C + C F+C G CI + CD +C D SDE C R C P +C
Sbjct: 1148 DELLCEATSRCEPGMFQCGSGSCIAGSWECDGRIDCSDGSDEHD-KCVHRSCPPDMQRCL 1206
Query: 643 NNKCI 647
+C+
Sbjct: 1207 LGQCL 1211
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 55/388 (14%)
Query: 224 KDIKIYSKDA--QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFI 281
+D + +S + + G N C +NNGGC+ +C + C C G D K+C + D
Sbjct: 337 RDCRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPPGYKLLDKKTCGDIDECE 396
Query: 282 MYSRVNRI------------------DSIHMTDKSDLNSPFESIRNS------------- 310
++I D++ K+ SP+ N
Sbjct: 397 NPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPYLIFTNRHEVRKIDLVKRDY 456
Query: 311 ----TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN----HRVLLERQ-GSVEGL 361
M+KN++ L + +++ D+ I S + + ++ +L++ Q S EG+
Sbjct: 457 SRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQVILIDSQLNSPEGV 516
Query: 362 AYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNW 421
A ++VH +YWT + + TI+ D + + + L + PR I +D +YW++W
Sbjct: 517 AIDWVHKNIYWTDSGNKTISVATADGSRRRTVFNSDLSE---PRAIAVDPTRRFMYWSDW 573
Query: 422 NSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNR 481
I++A +G G + +++ +I PN + LD ++L+W D++L + D++G+NR
Sbjct: 574 GDKA-KIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNR 632
Query: 482 IVL-SKISPL-HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAI 539
VL S I L HPF +AV+ + +FWTD A+ AN+ +G ++ L +N+ P IV
Sbjct: 633 EVLISSIDDLSHPFGLAVFEDRVFWTDLENEAIFSANRLSGLDISVLAENLNNPHDIVVF 692
Query: 540 SD-----NLDACAKTPCRHLNGNCDDIC 562
+ D+C +P NG C+ +C
Sbjct: 693 HELKQPKAPDSCELSP--QPNGGCEYLC 718
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+A+DW+ +NIYW+D I VA G R + + + +P A+AVDP +++WS+ G
Sbjct: 516 VAIDWVHKNIYWTDSGNKTISVATADGSRRRTVFNSDLSEPRAIAVDPTRRFMYWSDWGD 575
Query: 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDL 184
I +AGL+G + +L + I ITLDL
Sbjct: 576 KAKIEKAGLNGVGRQVLVSDNIEWPNGITLDL 607
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V +G + T+ + S LS+ +IAV P + M+WS+ + IE A ++G
Sbjct: 535 ISVATADGSRRRTVFN------SDLSEPRAIAVDPTRRFMYWSDWGDKA-KIEKAGLNGV 587
Query: 73 KRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG--G 129
R+ +VS ++P I +D + Q +YW D K + + G R VLIS
Sbjct: 588 GRQVLVSDNIEWPN------GITLDLLNQRLYWVDSKLHSLSCIDFNGSNREVLISSIDD 641
Query: 130 VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMP 176
+ P LAV + +FW++ + + L G ++LA+ + P
Sbjct: 642 LSHPFGLAVFEDR--VFWTDLENEAIFSANRLSGLDISVLAENLNNP 686
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C+ H+F+C +G CI N CD +C DKSDE C + CRP F+C + CI
Sbjct: 233 TCAAHEFQCGNGECILLNWKCDGDEDCKDKSDE--QDCPLVTCRPDEFQCGDGTCI 286
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC-----AMRDCRPG 637
D + C+ T CS ++F+C++ +CIP CD +C D SDE I C A C
Sbjct: 179 DEKKCSPLT-CSPNEFQCNNSVCIPQLWVCDNQADCEDHSDESIERCGYDAKAFNTCAAH 237
Query: 638 YFKCDNNKCIL 648
F+C N +CIL
Sbjct: 238 EFQCGNGECIL 248
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
CS +F+CS+ CI N CD NC D SDE C+ C P F+C+N+ CI
Sbjct: 148 ACSPDEFQCSNKTCISINFVCDGYNNCGDGSDEK--KCSPLTCSPNEFQCNNSVCI 201
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILS 649
C+E DF C +G CIP CD C D SDE C + C C + NKCI S
Sbjct: 67 TCAETDFACDNGHCIPDRWKCDGEEECSDGSDESEAACTKQVCPAEKISCGDLSNKCIPS 126
Query: 650 S 650
S
Sbjct: 127 S 127
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + C + T C +F+C DG CI + CD+V++C D SDE P F+C
Sbjct: 264 DEQDCPLVT-CRPDEFQCGDGTCIHGAKQCDKVHDCPDNSDEAGCVQESACESPSKFQCK 322
Query: 643 NNKCI 647
+ +CI
Sbjct: 323 SGECI 327
Score = 39.7 bits (91), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + F+C + CIP CD +C D SDE C + C F CDN CI
Sbjct: 29 CDKDQFQCRNERCIPAVWACDEDNDCSDNSDEA--DCPKKTCAETDFACDNGHCI 81
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 583 DNRSCTINTVC-SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
D C + C S F+C G CI + CD +C D SDE + C + +C
Sbjct: 303 DEAGCVQESACESPSKFQCKSGECIDGGKVCDLHRDCRDWSDEPLKECGINEC 355
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 33/361 (9%)
Query: 247 CAELCLYNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMT-DKSDLNSPF 304
C++LC+ S C C G + ++C D+ NR + MT D+S+ S
Sbjct: 351 CSQLCVNLAGSYKCECRAGFQLDPHSQACKAVDSIAYLFFTNRHEVRKMTLDRSEYTSLI 410
Query: 305 ESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-----HRVLLERQGSVE 359
+ +KN++ L + +++SD+ + I S +G++ V+ + +
Sbjct: 411 AN------LKNVVALDAEVASNRIYWSDLSQRKIYSAQIDGAHGFPAYDTVISSDLQAPD 464
Query: 360 GLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT 419
GLA +++H ++YWT D+ + + + + R + + KPR I +D +YWT
Sbjct: 465 GLAVDWIHGHIYWT---DSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMYWT 521
Query: 420 NWNSHLPS-IQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDG 478
+W +P+ I++ +G S++T DI PN + LD + +L+W D++L I D +G
Sbjct: 522 DWG--VPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNG 579
Query: 479 TNR-IVLSKISPL-HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGI 536
NR VL L HPF +A++ + +FWTD + A+ AN+ TG +V+ + +N+ P I
Sbjct: 580 GNRKTVLEDEQRLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDVHLVAENLLSPEDI 639
Query: 537 VAISD-----NLDACAKTPCRHLNGNCDDICKL-----DETGQVVCSCFTGKVLMEDNRS 586
V + ++ C KT NG C +C + + C+C G +L D RS
Sbjct: 640 VLFHNLTQPRGVNWCEKTA--LPNGGCQYLCLPAPQINSHSPKFTCACPDGTLLAADMRS 697
Query: 587 C 587
C
Sbjct: 698 C 698
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 135/331 (40%), Gaps = 71/331 (21%)
Query: 21 EYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ 80
EY T++++N N + ++++S +++WS+++++ I A +DG
Sbjct: 405 EY-TSLIANLKNVVALDAEVAS-------NRIYWSDLSQR--KIYSAQIDGAH-----GF 449
Query: 81 KKYPAVTACNLH----IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSAL 136
Y V + +L +AVDWI +IYW+D + VA G R L +P A+
Sbjct: 450 PAYDTVISSDLQAPDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAI 509
Query: 137 AVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDL----------KF 186
VDP G+++W++ G I + GL+G L E I ITLDL K
Sbjct: 510 VVDPAHGFMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKL 569
Query: 187 FSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDS-YLKDI---KIYSKDAQTG------ 236
S +++ GN + S+ + D + D+ I+S + TG
Sbjct: 570 HSISSIDVNGGNRKTVLEDEQRLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDVHLV 629
Query: 237 ----------------TNPCGVN--------NGGCAELCL------YNGVSAVCACAHG- 265
T P GVN NGGC LCL + CAC G
Sbjct: 630 AENLLSPEDIVLFHNLTQPRGVNWCEKTALPNGGCQYLCLPAPQINSHSPKFTCACPDGT 689
Query: 266 VVAQDGKSC-SEYDAFIMYSRVNRIDSIHMT 295
++A D +SC +E D + R + +T
Sbjct: 690 LLAADMRSCRTEADVILSTQRASTAARPQLT 720
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
CS H+F C G C+ + CD +C D SDE CA CRP F+C + CI S
Sbjct: 184 CSRHEFHCGSGECVHASWRCDGDADCRDGSDE--RDCAAATCRPDEFQCSDGTCIHGS 239
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C T CS+ +F+C++G CI CD +C D SDE CA C P +F+C+
Sbjct: 87 DELGCAPKT-CSQDEFRCAEGACISRLFACDGEPDCPDGSDEA--SCAPSTCGPAHFRCN 143
Query: 643 NNKCI 647
++ C+
Sbjct: 144 SSSCV 148
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 581 MEDNRSCTINTVCSEHD-FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYF 639
M D C T+C D FKC G CI ++ C+ +C D SDE I CA +C G
Sbjct: 251 MSDEVGCVNVTLCEGPDKFKCHSGECISLDKVCNSARDCQDWSDEPIKECATNECMRGNG 310
Query: 640 KC 641
C
Sbjct: 311 GC 312
Score = 39.3 bits (90), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCI 647
C ++F+C +G CI + CD C D SDE C C+ F C N+CI
Sbjct: 14 CGRNEFQCRNGKCISYKWVCDGSSECQDGSDEWEQTCMSLTCKSDDFSCGGRLNRCI 70
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 589 INTVCSEHDFKCSDGM--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
++ C DF C + CIP + CD +C D SDE L CA + C F+C C
Sbjct: 51 MSLTCKSDDFSCGGRLNRCIPGHWKCDGQQDCEDGSDE--LGCAPKTCSQDEFRCAEGAC 108
Query: 647 I 647
I
Sbjct: 109 I 109
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR--------DC 634
D SC +T C F+C+ C+P CD +C D SDE C R C
Sbjct: 126 DEASCAPST-CGPAHFRCNSSSCVPALWACDGEPDCDDGSDEWPARCGARPSPQPGRGPC 184
Query: 635 RPGYFKCDNNKCILSS 650
F C + +C+ +S
Sbjct: 185 SRHEFHCGSGECVHAS 200
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 190/431 (44%), Gaps = 76/431 (17%)
Query: 223 LKDIKIYSKDA--QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD-- 278
++D + +S + + GTN C N GGC+ +C + C C G D C + D
Sbjct: 270 VRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDEC 329
Query: 279 ----------------------------------------AFIMYSRVNRIDSIHMT-DK 297
A++ ++ NR + MT D+
Sbjct: 330 QDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIGTIAYLFFT--NRHEVRKMTLDR 387
Query: 298 SDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFN-----GSNHRVLL 352
S+ S + +KN++ L + +++SD+ + I S + S ++
Sbjct: 388 SEYTSLIPN------LKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSYDTIIG 441
Query: 353 ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSC 412
E + +GLA +++H+ +YWT D+ + + + K + + + KPR I +D
Sbjct: 442 EDLQAPDGLAVDWIHSNIYWT---DSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPV 498
Query: 413 DSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIE 472
+YWT+W + I++ +G S++T DI PN + LD +L+W D++L I
Sbjct: 499 HGFMYWTDWGTPA-KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSIS 557
Query: 473 RCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
D +G NR ++ K HPF +A++ + +FWTD + A+ AN+ TG +++ + +N+
Sbjct: 558 SIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSDIHLMAENL 617
Query: 531 RRPMGIVAISD-----NLDACAKTPCRHLNGNCDDICKL-----DETGQVVCSCFTGKVL 580
P IV + ++ C +T + NG C +C + + C+C G +L
Sbjct: 618 LSPEDIVLFHNLTQPRGVNWCERTALQ--NGGCQYLCLPAPQINPRSPKFTCACPDGMLL 675
Query: 581 MEDNRSCTINT 591
+D RSC T
Sbjct: 676 AKDMRSCLTET 686
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 131/323 (40%), Gaps = 63/323 (19%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLH----IAVDWIAQNIYWSD 106
+++WS+++++ + T+ + S Y + +L +AVDWI NIYW+D
Sbjct: 411 RIYWSDLSQRKIY-------STQIDRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTD 463
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ VA G R L +P A+ VDP G+++W++ G I + GL+G
Sbjct: 464 SILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDV 523
Query: 167 TILAQEIIMPIKDITLDL----------KFFSAFYRNLSKGNIHIISLSNLSDVSTISMK 216
L E I ITLDL K S +++ GN + S+
Sbjct: 524 YSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLA 583
Query: 217 PYGDS-YLKDI---KIYSKDAQTG----------------------TNPCGVN------- 243
+ D + DI I+S + TG T P GVN
Sbjct: 584 IFEDKVFWTDIINEAIFSANRLTGSDIHLMAENLLSPEDIVLFHNLTQPRGVNWCERTAL 643
Query: 244 -NGGCAELCL----YNGVSA--VCACAHG-VVAQDGKSC-SEYDAFIMYSRVNRIDSIHM 294
NGGC LCL N S CAC G ++A+D +SC +E + + ++S +
Sbjct: 644 QNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTETEPAGTTQGPSMVNSTAV 703
Query: 295 TDKSDLNSPFESIRNSTMMKNII 317
K +S + + TM ++ +
Sbjct: 704 GPKHTASSELTTAESVTMSQHAL 726
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D +C + T C +F+CSDG CI ++ CDR Y+C D SDE A P FKC
Sbjct: 198 DEENCDVAT-CRPDEFQCSDGTCIHGSRQCDREYDCKDMSDEQGCVNATLCEGPNKFKCQ 256
Query: 643 NNKCI 647
+ +CI
Sbjct: 257 SGECI 261
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C+ T CS+ +F+C DG CI CD +C D SDE C C P F+C+
Sbjct: 69 DEEGCSPKT-CSQDEFRCQDGKCIAPKFVCDSDRDCLDGSDEA--SCPTPTCGPASFQCN 125
Query: 643 NNKCI 647
++ CI
Sbjct: 126 SSTCI 130
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
N CS +F C G CI + CD +C DKSDE C + CRP F+C + CI
Sbjct: 165 NNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEE--NCDVATCRPDEFQCSDGTCIHG 222
Query: 650 SH 651
S
Sbjct: 223 SR 224
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 581 MEDNRSCTINTVCS-EHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
M D + C T+C + FKC G CI ++ C+ V +C D SDE + C +C
Sbjct: 235 MSDEQGCVNATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNEC 289
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILSS 650
F+C DG CI + CD C D SDE + C C+ G F C N+CI S
Sbjct: 1 FQCQDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPES 55
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 589 INTVCSEHDFKCSDGM--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
++ C DF C + CIP + CD +C + SDE C+ + C F+C + KC
Sbjct: 33 MSVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEE--GCSPKTCSQDEFRCQDGKC 90
Query: 647 I 647
I
Sbjct: 91 I 91
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC----------AMR 632
D SC T C F+C+ CIP CD +C D SDE +C +
Sbjct: 108 DEASCPTPT-CGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNN 166
Query: 633 DCRPGYFKCDNNKCILSS 650
C F C + +CI SS
Sbjct: 167 PCSALEFHCHSGECIHSS 184
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 170/373 (45%), Gaps = 50/373 (13%)
Query: 236 GTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSE------------------- 276
G N C NNGGC+ +C + C C G D K+C +
Sbjct: 336 GLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKG 395
Query: 277 ------YDAFIM-------YSRVNRIDSIHMTDKSDLNSPFESIRNST----MMKNIIEL 319
Y + M + + S+ T++ ++ RN + M+KN++ L
Sbjct: 396 YFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTNRHEVRRIDLVKRNYSRLIPMLKNVVAL 455
Query: 320 SYDYKRKTLFYSDIQKGTINSVFFNGSN----HRVLLERQ-GSVEGLAYEYVHNYLYWTC 374
+ +++ D+ I S + + ++ VL++ Q S EGLA ++VH ++YWT
Sbjct: 456 DVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQEVLIDEQLHSPEGLAVDWVHKHIYWTD 515
Query: 375 NNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434
+ + TI+ +D + + + L + PR I +D +YW++W I+++ +
Sbjct: 516 SGNKTISVATVDGGRRRTLFSRNLSE---PRAIAVDPLRGFMYWSDWGDQA-KIEKSGLN 571
Query: 435 GFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPL--HP 492
G +++++ +I PN + LD +++L+W D++L ++ D+ G NR L + HP
Sbjct: 572 GVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHP 631
Query: 493 FDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCR 552
F +AV+ + +FWTD A+ AN+ G E+ L +N+ P IV + A C
Sbjct: 632 FGIAVFEDKVFWTDLENEAIFSANRLNGLEISILAENLNNPHDIVIFHELKQPRAPDACE 691
Query: 553 ---HLNGNCDDIC 562
NG C+ +C
Sbjct: 692 LSVQPNGGCEYLC 704
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 26 ILSNESNDTSTLSKISSIAVWPVKGKMFWSNVT-KQVVTIEMAFMDGTKRETVVSQKKYP 84
+ N S L + ++ V +++W +++ +++ + M K + V+ ++
Sbjct: 438 VKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQEVLIDEQLH 497
Query: 85 AVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGY 144
+ +AVDW+ ++IYW+D I VA + G R L S + +P A+AVDP G+
Sbjct: 498 SPEG----LAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGF 553
Query: 145 LFWSESGKIPLIARAGLDG-KKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIIS 203
++WS+ G I ++GL+G +QT+++ I P ITLDL ++ + + I
Sbjct: 554 MYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWP-NGITLDLLSQRLYWVDSKLHQLSSID 612
Query: 204 LSNLSDVSTIS-----MKPYGDSYLKDIKIYSKDAQ 234
S + + IS P+G + +D K++ D +
Sbjct: 613 FSGGNRKTLISSTDFLSHPFGIAVFED-KVFWTDLE 647
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 20/223 (8%)
Query: 37 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVD 96
L +AV V ++W++ + TI +A +DG +R T+ S+ IAVD
Sbjct: 496 LHSPEGLAVDWVHKHIYWTDSGNK--TISVATVDGGRRRTLFSRNLSEPRA-----IAVD 548
Query: 97 WIAQNIYWSDPKENV-IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 155
+ +YWSD + IE + L G R L+S ++ P+ + +D S L+W +S L
Sbjct: 549 PLRGFMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQL 608
Query: 156 IARAGLDGKKQTILAQEIIM--PIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTI 213
+ G ++T+++ + P + K F+ +L N I S + L+ + I
Sbjct: 609 SSIDFSGGNRKTLISSTDFLSHPFGIAVFEDKV---FWTDLE--NEAIFSANRLNGLE-I 662
Query: 214 SMKPYGDSYLKDIKIYSKDAQT-GTNPCGVN---NGGCAELCL 252
S+ + DI I+ + Q + C ++ NGGC LCL
Sbjct: 663 SILAENLNNPHDIVIFHELKQPRAPDACELSVQPNGGCEYLCL 705
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 585 RSCTINTVCSEHDFKCSD---GMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPG 637
R C + C +F+C G CIP CDR ++C D+SDE C RPG
Sbjct: 199 RGCA-DPACGPREFRCGGDGGGACIPERWVCDRQFDCEDRSDEAAELCG----RPG 249
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
F C G C+ CD +C DKSDE C + CR F+C + C+L+
Sbjct: 265 FACRSGECVHLGWRCDGDRDCKDKSDEAD--CPLGTCRGDEFQCGDGTCVLA 314
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C + F+C + CIP CD +C D SDE C + C F CDN CI
Sbjct: 47 CEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDD--CPKKTCADSDFTCDNGHCI 99
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C T C++ DF C +G CI CD C D SDE C + C C
Sbjct: 77 DEDDCPKKT-CADSDFTCDNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCG 135
Query: 643 --NNKCILSS 650
++KC+ +S
Sbjct: 136 PTSHKCVPAS 145
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 545 ACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGM 604
AC C HL CD G C D C + T C +F+C DG
Sbjct: 266 ACRSGECVHLGWRCD--------GDRDCK------DKSDEADCPLGT-CRGDEFQCGDGT 310
Query: 605 CIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
C+ + C++ +C D SDE + +C
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEAGCLQGLNEC 340
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 193/443 (43%), Gaps = 79/443 (17%)
Query: 202 ISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCA 261
I+L + D S + + D +KD + TN C NNGGC+ +C + C
Sbjct: 291 IALDKVCD-SMRDCRDWSDEPIKDCR---------TNECLDNNGGCSHVCKDLKIGYECL 340
Query: 262 CAHGVVAQDGKSCSEYD-------------------------AFIM--YSRV-------- 286
C +G D C + D F M ++RV
Sbjct: 341 CPNGFQLVDQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVGSVA 400
Query: 287 -----NRIDSIHMT-DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINS 340
NR + MT D+S+ S + +KN++ L + +++SD+ +G I S
Sbjct: 401 YLLFTNRHEVRKMTLDRSEYTSLIPN------LKNVVALDTEVANNRIYWSDLSQGKIYS 454
Query: 341 VFFNG----SNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
+ S ++ + +GLA +++H +YWT D+ + + K R +
Sbjct: 455 ALMDQAPTLSYDTIISGDLQAPDGLAVDWIHGNIYWT---DSVPGSVSVADTKGIRRRTL 511
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
+ +PR I +D +YWT+W + I++ +G S++T DI PN + LD
Sbjct: 512 FQEKGSRPRDIVVDPVHGFMYWTDWGTPA-KIKKGGLNGVDIYSLVTEDIQWPNGITLDI 570
Query: 457 QAEKLFWGDARLDKIERCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLR 514
+ +L+W D++L I D +G NR I+ + HPF +A+Y + +FWTD + A+
Sbjct: 571 PSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKQLAHPFSLAIYEDKVFWTDVINEAIFS 630
Query: 515 ANKYTGEEVYTLRKNIRRPMGIVAISD-----NLDACAKTPCRHLNGNCDDICKL----- 564
AN+ TG +V + +N+ P IV + ++ C +T NG C +C
Sbjct: 631 ANRLTGSDVNLVAENLLSPEDIVLFHNITQPRGVNWCERTA--LPNGGCQYLCLPAPQIN 688
Query: 565 DETGQVVCSCFTGKVLMEDNRSC 587
+ + C+C G +L +D RSC
Sbjct: 689 PHSPKFTCACPDGMLLAKDMRSC 711
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLH----IAVDWIAQNIYWSD 106
+++WS++++ I A MD + Y + + +L +AVDWI NIYW+D
Sbjct: 441 RIYWSDLSQG--KIYSALMDQAPTLS------YDTIISGDLQAPDGLAVDWIHGNIYWTD 492
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ VA G R L +P + VDP G+++W++ G I + GL+G
Sbjct: 493 SVPGSVSVADTKGIRRRTLFQEKGSRPRDIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 552
Query: 167 TILAQEIIMPIKDITLDL----------KFFSAFYRNLSKGNIHIISLSNLSDVSTISMK 216
L E I ITLD+ K S +++ GN I S+
Sbjct: 553 YSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKQLAHPFSLA 612
Query: 217 PYGDS-YLKDI---KIYSKDAQTG----------------------TNPCGVN------- 243
Y D + D+ I+S + TG T P GVN
Sbjct: 613 IYEDKVFWTDVINEAIFSANRLTGSDVNLVAENLLSPEDIVLFHNITQPRGVNWCERTAL 672
Query: 244 -NGGCAELCL------YNGVSAVCACAHG-VVAQDGKSC 274
NGGC LCL + CAC G ++A+D +SC
Sbjct: 673 PNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAKDMRSC 711
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + C T CS+ +F+C DG CI CD+ +C D SDE +C C P +F+C+
Sbjct: 100 DEQGCAPKT-CSQDEFRCQDGKCISQKFVCDQDQDCVDGSDEA--HCQAATCGPAHFRCN 156
Query: 643 NNKCILS 649
++ CI S
Sbjct: 157 SSACIPS 163
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKCDNNKCI 647
+ C +F+C+DG CI ++ CDR Y+C D SDE G + D P FKC + +CI
Sbjct: 233 VTATCRPDEFQCADGTCIHGSRQCDREYDCKDMSDELGCINVTQCD-GPNKFKCHSGECI 291
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
++ CS +F C CI + CD +C DKSDE +C CRP F+C + CI
Sbjct: 195 SSPCSSLEFHCGSSECIHRSWVCDGSADCKDKSDEE--HCVTATCRPDEFQCADGTCIHG 252
Query: 650 SH 651
S
Sbjct: 253 SR 254
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 581 MEDNRSCTINTVC-SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
M D C T C + FKC G CI ++ CD + +C D SDE I C +C
Sbjct: 265 MSDELGCINVTQCDGPNKFKCHSGECIALDKVCDSMRDCRDWSDEPIKDCRTNEC 319
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILS 649
C ++F+C DG CI CD C D SDE C C+ F C ++CI +
Sbjct: 26 TCDRNEFRCRDGKCIASKWVCDGSPECPDGSDESSETCMSVTCQSKEFSCGGRVSRCIPN 85
Query: 650 S 650
S
Sbjct: 86 S 86
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGM--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYF 639
E + +C ++ C +F C + CIP + CD +C + SDE CA + C F
Sbjct: 58 ESSETC-MSVTCQSKEFSCGGRVSRCIPNSWRCDGQTDCENGSDE--QGCAPKTCSQDEF 114
Query: 640 KCDNNKCI 647
+C + KCI
Sbjct: 115 RCQDGKCI 122
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 98 IAQN-IYWSDPKENVIEVARLTGQYRY---VLISGGVDQPSALAVDPESGYLFWSESGKI 153
+A N IYWSD + I A + +ISG + P LAVD G ++W++S +
Sbjct: 437 VANNRIYWSDLSQGKIYSALMDQAPTLSYDTIISGDLQAPDGLAVDWIHGNIYWTDS--V 494
Query: 154 P-LIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRN------LSKGNIHIISLSN 206
P ++ A G ++ L QE +DI +D ++ + + KG ++ + + +
Sbjct: 495 PGSVSVADTKGIRRRTLFQEKGSRPRDIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 554
Query: 207 L--SDV---STISMK-PYGDSYLKDIKIYS 230
L D+ + I++ P G Y D K++S
Sbjct: 555 LVTEDIQWPNGITLDIPSGRLYWVDSKLHS 584
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 191/431 (44%), Gaps = 64/431 (14%)
Query: 216 KPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275
K + D LK+ I N C VNNGGC+ +C + C C G D ++C
Sbjct: 363 KDWSDEPLKECNI---------NECLVNNGGCSHICRDLVIGYECDCPAGFELVDRRTCG 413
Query: 276 EYD-------------------------------AFIMYSRVNRIDSIHMTDKSDLN--- 301
+ D A + V + + T++ D+
Sbjct: 414 DIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPCLIFTNRRDIRKIG 473
Query: 302 -SPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN----HRVLLERQG 356
E I+ ++N + L D + L+++D + I S + + H +L+
Sbjct: 474 LERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHTRILDNIH 533
Query: 357 SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRI 416
S G+A ++++ +YWT D++ I + S ++ V+ L + +P I +D +
Sbjct: 534 SPAGIAVDWIYKNIYWT---DSSAKTISVASLNGKKRKVLFLSELREPASIAVDPLSGFM 590
Query: 417 YWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDY 476
YW++W I++A +GF + ++TT+I PN +ALD +L+W D++L + D
Sbjct: 591 YWSDW-GEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDL 649
Query: 477 DGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPM 534
+G +R ++ S + HP + ++ + +FW D AV ANK+TG E+ TL N+
Sbjct: 650 NGQDRRLVLKSHMFLPHPLALTIFEDRVFWIDGENEAVYGANKFTGAELVTLVNNLNDAQ 709
Query: 535 GIVAISDNLDACAKTPCRH--LNGNCDDIC----KLDE-TGQVVCSCFTGKVLMEDNRSC 587
I+ + + + C +NG C +C +++E + + C+C G L ED C
Sbjct: 710 DIIVYHELVQPSGRNWCEENMVNGGCSYLCLPAPQINEHSPKYTCTCPAGYFLQEDGLRC 769
Query: 588 ---TINTVCSE 595
I++V SE
Sbjct: 770 GGFNISSVVSE 780
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
K++W++ +++ I A +D R+ V + + IAVDWI +NIYW+D
Sbjct: 500 KLYWADFSQKA--IFSASID--TRDKVGTHTRILDNIHSPAGIAVDWIYKNIYWTDSSAK 555
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-KKQTIL 169
I VA L G+ R VL + +P+++AVDP SG+++WS+ G+ I +AG++G +Q ++
Sbjct: 556 TISVASLNGKKRKVLFLSELREPASIAVDPLSGFMYWSDWGEPAKIEKAGMNGFDRQQLV 615
Query: 170 AQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLS 208
EI P I LDL S Y SK +H++S +L+
Sbjct: 616 TTEIQWP-NGIALDL-VKSRLYWLDSK--LHMLSSVDLN 650
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 41 SSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV-VSQKKYPAVTACNLHIAVDWIA 99
+ IAV + ++W++ + + TI +A ++G KR+ + +S+ + PA IAVD ++
Sbjct: 536 AGIAVDWIYKNIYWTDSSAK--TISVASLNGKKRKVLFLSELREPA------SIAVDPLS 587
Query: 100 QNIYWSDPKENV-IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIAR 158
+YWSD E IE A + G R L++ + P+ +A+D L+W +S K+ +++
Sbjct: 588 GFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDS-KLHMLSS 646
Query: 159 AGLDGK-KQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISM-K 216
L+G+ ++ +L + +P L L F + N + + + +++
Sbjct: 647 VDLNGQDRRLVLKSHMFLP---HPLALTIFEDRVFWIDGENEAVYGANKFTGAELVTLVN 703
Query: 217 PYGDSYLKDIKIYSKDAQ-TGTNPCGVN--NGGCAELCL------YNGVSAVCACAHGVV 267
D+ +DI +Y + Q +G N C N NGGC+ LCL + C C G
Sbjct: 704 NLNDA--QDIIVYHELVQPSGRNWCEENMVNGGCSYLCLPAPQINEHSPKYTCTCPAGYF 761
Query: 268 AQ-DGKSCSEYDAFIMYSRV 286
Q DG C ++ + S V
Sbjct: 762 LQEDGLRCGGFNISSVVSEV 781
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 584 NRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
+ S + C+E DF C+ G C+P CD +C D SDE C MR CR C
Sbjct: 81 DESACVKKTCAESDFVCNSGQCVPNRWQCDGDPDCEDGSDESAELCHMRTCRVNEISC 138
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 572 CSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAM 631
CS + + L + R CS + +C G CI CD +C D SDE + C
Sbjct: 236 CSDHSDESLEQCGRQPAPPVKCSTSEVQCGSGECIHKKWRCDGDPDCKDGSDE--INCPS 293
Query: 632 RDCRPGYFKCDNNKCILSSH 651
R CRP F+C++ CI S
Sbjct: 294 RTCRPDQFRCEDGNCIHGSR 313
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 525 TLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDI--CKLDETGQVVCSCFTGKVLME 582
+L + R+P V S + C C H CD CK D + ++ C T
Sbjct: 243 SLEQCGRQPAPPVKCSTSEVQCGSGECIHKKWRCDGDPDCK-DGSDEINCPSRT------ 295
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
C F+C DG CI ++ C+ V +C D +DE ++ PG FKC
Sbjct: 296 ----------CRPDQFRCEDGNCIHGSRQCNGVRDCLDGTDEANCNNVIQCSGPGKFKCR 345
Query: 643 NNKCI 647
+ +CI
Sbjct: 346 SGECI 350
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPGYFKCDNNKC 646
C H+F+C CIP + CD +C D SDE + C + C +C + +C
Sbjct: 210 TCGVHEFQCKSSTCIPISWVCDDDADCSDHSDESLEQCGRQPAPPVKCSTSEVQCGSGEC 269
Query: 647 I 647
I
Sbjct: 270 I 270
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
FKC G CI N+ C+ +C D SDE + C + +C
Sbjct: 342 FKCRSGECIDINKVCNHHGDCKDWSDEPLKECNINEC 378
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 50/396 (12%)
Query: 238 NPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD------------------- 278
N C VNNGGC+ +C + + C CA G D K+C + D
Sbjct: 358 NECLVNNGGCSHICKDSVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGY 417
Query: 279 ------------AFIMYSRVNRIDSIHMTDKSDLN----SPFESIRNSTMMKNIIELSYD 322
A + V + S+ T++ D+ E I+ ++N + L D
Sbjct: 418 KCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDAD 477
Query: 323 YKRKTLFYSDIQKGTINSVFFNG--SNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
+ LF++D+ + I S + H +++ + +A ++V+ +YWT TI
Sbjct: 478 IAAQKLFWADVSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASRTI 537
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
+ LD K + + L + P I +D +YW++W I++A +GF
Sbjct: 538 SVATLDGAKRKFLFNSDLRE---PASIAVDPLSGFVYWSDW-GEPAKIEKAGMNGFDRRP 593
Query: 441 IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN-RIVLSKISPL-HPFDMAVY 498
++T DI PN + LD +L+W D++L + D +G + RIVL + L HP + ++
Sbjct: 594 LVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIF 653
Query: 499 GEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRH--LNG 556
+ ++W D AV ANK+TG E+ TL N+ I+ + + K C NG
Sbjct: 654 EDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENG 713
Query: 557 NCDDIC----KLDE-TGQVVCSCFTGKVLMEDNRSC 587
C+ +C +++E + + CSC G L E+ R C
Sbjct: 714 GCEYLCLPAPQINEHSPKYTCSCPNGYHLEENGREC 749
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 58/301 (19%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY-PAVTACNLHIAVDWIAQNIYWSDPKE 109
K+FW++V+++ + + D R + Y PA IAVDW+ + IYW+D
Sbjct: 482 KLFWADVSQKAI-FSASIDDKVGRHVKMIDNVYNPAA------IAVDWVYKTIYWTDAAS 534
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
I VA L G R L + + +P+++AVDP SG+++WS+ G+ I +AG++G + L
Sbjct: 535 RTISVATLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPL 594
Query: 170 AQEIIMPIKDITLD------------LKFFSAFYRNLSKGNIHIISLSNLSDVSTISM-- 215
I ITLD L S+ N I + SL L+ +++
Sbjct: 595 VTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFE 654
Query: 216 -----------KPYGDSYL---------------KDIKIYSKDAQ-TGTNPC--GVNNGG 246
YG + +DI +Y + Q +G N C + NGG
Sbjct: 655 DRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGG 714
Query: 247 CAELCL------YNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSD 299
C LCL + C+C +G + ++G+ C + YS ++ ++ S
Sbjct: 715 CEYLCLPAPQINEHSPKYTCSCPNGYHLEENGRECQSTATTVTYSETKDTNTTEISPTSG 774
Query: 300 L 300
L
Sbjct: 775 L 775
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D ++C + C+E DF C++G CIP CD +C D SDE C MR CR C
Sbjct: 63 DEKNC-VKKTCAESDFVCNNGQCIPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC 120
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 546 CAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMC 605
C+ + C ++ CDD CS + + L + R I+T C + +C G C
Sbjct: 200 CSTSSCIPISWVCDD--------DADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGEC 251
Query: 606 IPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651
I CD +C D SDE + C R CRP F+C++ CI S
Sbjct: 252 IHKKWRCDGDPDCKDGSDE--VNCPSRTCRPDQFECEDGSCIHGSR 295
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPGYFKCDNNKC 646
C H+F+CS CIP + CD +C D+SDE + C + C +C + +C
Sbjct: 192 TCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGEC 251
Query: 647 I 647
I
Sbjct: 252 I 252
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C F+C DG CI ++ C+ + +C D SDE + PG FKC + +CI
Sbjct: 277 TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECI 332
Score = 36.6 bits (83), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
T C F+C++G CI CD +C D SDE C + C F C+N +CI
Sbjct: 31 TKCEASQFQCTNGRCITQLWKCDGDEDCVDGSDE--KNCVKKTCAESDFVCNNGQCI 85
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
+N FKC G CI ++ C++ +C D SDE + C + +C
Sbjct: 315 VNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC 360
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 172/396 (43%), Gaps = 50/396 (12%)
Query: 238 NPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD------------------- 278
N C VNNGGC+ +C + C CA G D K+C + D
Sbjct: 358 NECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGY 417
Query: 279 ------------AFIMYSRVNRIDSIHMTDKSDLN----SPFESIRNSTMMKNIIELSYD 322
A + V + S+ T++ D+ E I+ ++N + L D
Sbjct: 418 KCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDAD 477
Query: 323 YKRKTLFYSDIQKGTINSVFFNG--SNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
+ LF++D+ + I S + H +++ + +A ++V+ +YWT TI
Sbjct: 478 IAAQKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTI 537
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
+ LD K + + L + P I +D +YW++W I++A +GF
Sbjct: 538 SVATLDGAKRKFLFNSDLRE---PASIAVDPLSGFVYWSDW-GEPAKIEKAGMNGFDRRP 593
Query: 441 IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN-RIVLSKISPL-HPFDMAVY 498
++T DI PN + LD +L+W D++L + D +G + RIVL + L HP + ++
Sbjct: 594 LVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIF 653
Query: 499 GEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRH--LNG 556
+ ++W D AV ANK+TG E+ TL N+ I+ + + K C NG
Sbjct: 654 EDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENG 713
Query: 557 NCDDICKL-----DETGQVVCSCFTGKVLMEDNRSC 587
C+ +C D + + CSC G L E+ R C
Sbjct: 714 GCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGREC 749
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 58/301 (19%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY-PAVTACNLHIAVDWIAQNIYWSDPKE 109
K+FW++++++ + + D R + Y PA IAVDW+ + IYW+D
Sbjct: 482 KLFWADLSQKAI-FSASIDDKVGRHFKMIDNVYNPAA------IAVDWVYKTIYWTDAAS 534
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
I VA L G R L + + +P+++AVDP SG+++WS+ G+ I +AG++G + L
Sbjct: 535 KTISVATLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPL 594
Query: 170 AQEIIMPIKDITLD------------LKFFSAFYRNLSKGNIHIISLSNLSDVSTISM-- 215
E I ITLD L S+ N I + SL L+ +++
Sbjct: 595 VTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFE 654
Query: 216 -----------KPYGDSYL---------------KDIKIYSKDAQ-TGTNPC--GVNNGG 246
YG + +DI +Y + Q +G N C + NGG
Sbjct: 655 DRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEDDMENGG 714
Query: 247 CAELCLY------NGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSD 299
C LCL + C+C +G + ++G+ C + YS I++ + S
Sbjct: 715 CEYLCLPAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDINTTDILRTSG 774
Query: 300 L 300
L
Sbjct: 775 L 775
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 546 CAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMC 605
C+ + C L+ CDD CS + + L + R I+T C + +C G C
Sbjct: 200 CSTSSCIPLSWVCDD--------DADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGEC 251
Query: 606 IPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651
I CD +C D SDE + C R CRP F+C++ CI S
Sbjct: 252 IHKKWRCDGDPDCKDGSDE--VNCPSRTCRPDQFECEDGSCIHGSR 295
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D ++C + C+E DF C +G C+P CD +C D SDE C MR CR C
Sbjct: 63 DEKNC-VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC 120
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPGYFKCDNNKC 646
C H+F+CS CIP + CD +C D+SDE + C + C +C + +C
Sbjct: 192 TCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGEC 251
Query: 647 I 647
I
Sbjct: 252 I 252
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C F+C DG CI ++ C+ + +C D SDE + PG FKC + +CI
Sbjct: 277 TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECI 332
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
+N FKC G CI ++ CD+ +C D SDE + C + +C
Sbjct: 315 VNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINEC 360
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 174/397 (43%), Gaps = 72/397 (18%)
Query: 224 KDIKIYSKDAQT--GTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDA-- 279
+D + +S + Q G N C NNGGC+ +C + C C G D K+C + D
Sbjct: 355 RDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQ 414
Query: 280 --------------------------------------------FIMYSRVNRIDSIHMT 295
F V RID +
Sbjct: 415 DPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNRHEVRRIDLV--- 471
Query: 296 DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGS---NHRVLL 352
K D + R M+KN++ L + +++ D+ I S + + + +V+L
Sbjct: 472 -KRDYS------RLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQVVL 524
Query: 353 --ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDID 410
E+ S EGLA ++VH ++YWT + + TI+ D +R + + +PR I +D
Sbjct: 525 IDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTD---GRRRCTLFSRELSEPRAIAVD 581
Query: 411 SCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDK 470
+YW++W I++A +G +++++ +I PN + LD +++L+W D++L +
Sbjct: 582 PLRGFMYWSDWGFQA-KIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQ 640
Query: 471 IERCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528
+ D++G NR ++ S HPF +AV+ + +FWTD A+ AN+ G E+ L +
Sbjct: 641 LSSIDFNGGNRKMLIFSTDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAE 700
Query: 529 NIRRPMGIVAISDNLDACAKTPC---RHLNGNCDDIC 562
N+ P IV + A C NG C+ +C
Sbjct: 701 NLNNPHDIVIFHELKQPKAADACDLSAQPNGGCEYLC 737
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+AVDW+ ++IYW+D I VA G+ R L S + +P A+AVDP G+++WS+ G
Sbjct: 535 LAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMYWSDWGF 594
Query: 153 IPLIARAGLDGK-KQTILAQEIIMPIKDITLDL 184
I +AGL+G +QT+++ I P ITLDL
Sbjct: 595 QAKIEKAGLNGADRQTLVSDNIEWP-NGITLDL 626
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 125/316 (39%), Gaps = 70/316 (22%)
Query: 13 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 72
I V +G + T+ S E LS+ +IAV P++G M+WS+ Q IE A ++G
Sbjct: 554 ISVATTDGRRRCTLFSRE------LSEPRAIAVDPLRGFMYWSDWGFQ-AKIEKAGLNGA 606
Query: 73 KRETVVSQK-KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLI--SGG 129
R+T+VS ++P I +D ++Q +YW D K + + G R +LI +
Sbjct: 607 DRQTLVSDNIEWPN------GITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIFSTDF 660
Query: 130 VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSA 189
+ P +AV + +FW++ + + L+G + ILA+ + P DI +
Sbjct: 661 LSHPFGVAVFEDK--VFWTDLENEAIFSANRLNGLEIAILAENLNNP-HDIVI------- 710
Query: 190 FYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAE 249
H + +D +S +P NGGC
Sbjct: 711 ---------FHELKQPKAADACDLSAQP--------------------------NGGCEY 735
Query: 250 LCL------YNGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNS 302
LCL + CAC + + D K C Y A S ++ T + +
Sbjct: 736 LCLPAPQISSHSPKYTCACPDTMWLGPDMKRC--YRAPQSTSTTTLASAMTRTVPATTRA 793
Query: 303 PFESIRNSTMMKNIIE 318
P +I + T + E
Sbjct: 794 PGTTIHDPTYQNHSTE 809
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C E F+C + CIP CD +C D SDE C R C F CDN CI
Sbjct: 41 CEEDQFRCRNERCIPLVWRCDEDNDCSDNSDEDD--CPKRTCADSDFTCDNGHCI 93
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD--NNKCILS 649
C++ DF C +G CIP CD C D SDE C+ +C C ++KC+ +
Sbjct: 79 TCADSDFTCDNGHCIPERWKCDGEEECPDGSDESKATCSSEECPAEKLSCGPTSHKCVPA 138
Query: 650 S 650
S
Sbjct: 139 S 139
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 585 RSCTINTVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCA 630
R C+ + C +F+C G CIP CDR ++C D+SDE C
Sbjct: 193 RGCS-DPACPPREFRCGGGGTCIPERWVCDRQFDCEDRSDEAAELCG 238
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 598 FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
F C G CI CD +C DKSDE C+ CR F+C + C+L+
Sbjct: 257 FTCRSGECIHLGWRCDGDRDCKDKSDEAD--CSPGPCRENEFQCGDGTCVLA 306
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C E++F+C DG C+ + C++ +C D SDE P F+C + +C+
Sbjct: 291 CRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRFQCKSGECV 345
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLT----GQYRYVLISGGVDQPSALAVDPESGYLFWS 148
+ V+ IYW D I A + + VLI + P LAVD +++W+
Sbjct: 488 LDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVHKHIYWT 547
Query: 149 ESGKIPLIARAGLDGKKQ-TILAQEIIMPIKDITLDLKFF 187
+SG I+ A DG+++ T+ ++E+ P L+ F
Sbjct: 548 DSGNK-TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGF 586
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
Query: 540 SDNLDACAKTPCRHLNGNCDD---ICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCS-E 595
SD D C+ PCR C D + + Q C G D C + C
Sbjct: 281 SDEAD-CSPGPCRENEFQCGDGTCVLAIKRCNQER-DCPDGS----DEAGCLQESTCEGP 334
Query: 596 HDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
F+C G C+ + CD +C D SDE C + +C
Sbjct: 335 RRFQCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNEC 373
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 173/396 (43%), Gaps = 50/396 (12%)
Query: 238 NPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD------------------- 278
N C VNNGGC+ +C + C CA G D K+C + D
Sbjct: 358 NECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGY 417
Query: 279 ------------AFIMYSRVNRIDSIHMTDKSDLN----SPFESIRNSTMMKNIIELSYD 322
A + V + S+ T++ D+ E I+ ++N + L D
Sbjct: 418 KCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDAD 477
Query: 323 YKRKTLFYSDIQKGTINSVFFNG--SNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
+ LF++D+ + I S + H +++ + +A ++V+ +YWT TI
Sbjct: 478 IAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTI 537
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
+ LD K + + L + P I +D +YW++W I++A +GF
Sbjct: 538 SVATLDGTKRKFLFNSDLRE---PASIAVDPLSGFVYWSDW-GEPAKIEKAGMNGFDRRP 593
Query: 441 IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN-RIVLSKISPL-HPFDMAVY 498
++T DI PN + LD +L+W D++L + D +G + RIVL + L HP + ++
Sbjct: 594 LVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIF 653
Query: 499 GEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRH--LNG 556
+ ++W D AV ANK+TG E+ TL N+ I+ + + K C NG
Sbjct: 654 EDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENG 713
Query: 557 NCDDICKL-----DETGQVVCSCFTGKVLMEDNRSC 587
C+ +C D + + CSC +G + E+ R C
Sbjct: 714 GCEYLCLPAPQINDHSPKYTCSCPSGYNVEENGRDC 749
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 58/301 (19%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY-PAVTACNLHIAVDWIAQNIYWSDPKE 109
K+FW++++++ + + D R + Y PA IAVDW+ + IYW+D
Sbjct: 482 KLFWADLSQKAI-FSASIDDKVGRHVKMIDNVYNPAA------IAVDWVYKTIYWTDAAS 534
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
I VA L G R L + + +P+++AVDP SG+++WS+ G+ I +AG++G + L
Sbjct: 535 KTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPL 594
Query: 170 AQEIIMPIKDITLD------------LKFFSAFYRNLSKGNIHIISLSNLSDVSTISM-- 215
I ITLD L S+ N I + SL L+ +++
Sbjct: 595 VTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFE 654
Query: 216 -----------KPYGDSYL---------------KDIKIYSKDAQ-TGTNPC--GVNNGG 246
YG + +DI +Y + Q +G N C + NGG
Sbjct: 655 DRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGG 714
Query: 247 CAELCLY------NGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSD 299
C LCL + C+C G V ++G+ C + YS ++ ++ S
Sbjct: 715 CEYLCLPAPQINDHSPKYTCSCPSGYNVEENGRDCQSTATTVTYSETKDTNTTEISATSG 774
Query: 300 L 300
L
Sbjct: 775 L 775
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 546 CAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMC 605
C+ + C ++ CDD CS + + L + R I+T C + +C G C
Sbjct: 200 CSTSSCIPISWVCDD--------DADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGEC 251
Query: 606 IPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651
I CD +C D SDE + C R CRP F+C++ CI S
Sbjct: 252 IHKKWRCDGDPDCKDGSDE--VNCPSRTCRPDQFECEDGSCIHGSR 295
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D ++C + C+E DF C++G C+P CD +C D SDE C MR CR C
Sbjct: 63 DEKNC-VKKTCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESPEQCHMRTCRIHEISC 120
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPGYFKCDNNKC 646
C H+F+CS CIP + CD +C D+SDE + C + C +C + +C
Sbjct: 192 TCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGEC 251
Query: 647 I 647
I
Sbjct: 252 I 252
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C F+C DG CI ++ C+ + +C D SDE + PG FKC + +CI
Sbjct: 277 TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECI 332
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILS 649
C F+C++G CI CD +C D SDE C + C F C+N +C+ S
Sbjct: 33 CEPSQFQCTNGRCITLLWKCDGDEDCVDGSDE--KNCVKKTCAESDFVCNNGQCVPS 87
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
+N FKC G CI ++ C++ +C D SDE + C + +C
Sbjct: 315 VNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINEC 360
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 172/396 (43%), Gaps = 50/396 (12%)
Query: 238 NPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD------------------- 278
N C VNNGGC+ +C + C CA G D K+C + D
Sbjct: 358 NECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGY 417
Query: 279 ------------AFIMYSRVNRIDSIHMTDKSDLN----SPFESIRNSTMMKNIIELSYD 322
A + V + S+ T++ D+ E I+ ++N + L D
Sbjct: 418 KCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDAD 477
Query: 323 YKRKTLFYSDIQKGTINSVFFNG--SNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
+ LF++D+ + I S + H +++ + +A ++V+ +YWT TI
Sbjct: 478 IAAQKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTI 537
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
+ LD K + + L + P I +D +YW++W I++A +GF
Sbjct: 538 SVATLDGTKRKFLFNSDLRE---PASIAVDPLSGFVYWSDW-GEPAKIEKAGMNGFDRRP 593
Query: 441 IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN-RIVLSKISPL-HPFDMAVY 498
++T DI PN + LD +L+W D++L + D +G + RIVL + L HP + ++
Sbjct: 594 LVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIF 653
Query: 499 GEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRH--LNG 556
+ ++W D AV ANK+TG E+ TL N+ I+ + + K C NG
Sbjct: 654 EDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIIYHELVQPSGKNWCEEDMENG 713
Query: 557 NCDDICKL-----DETGQVVCSCFTGKVLMEDNRSC 587
C+ +C D + + CSC G L E+ R C
Sbjct: 714 GCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGREC 749
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 58/301 (19%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY-PAVTACNLHIAVDWIAQNIYWSDPKE 109
K+FW++++++ + + D R + Y PA IAVDW+ + IYW+D
Sbjct: 482 KLFWADLSQKAI-FSASIDDKVGRHFKMIDNVYNPAA------IAVDWVYKTIYWTDAAS 534
Query: 110 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 169
I VA L G R L + + +P+++AVDP SG+++WS+ G+ I +AG++G + L
Sbjct: 535 KTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPL 594
Query: 170 AQEIIMPIKDITLD------------LKFFSAFYRNLSKGNIHIISLSNLSDVSTISM-- 215
E I ITLD L S+ N I + SL L+ +++
Sbjct: 595 VTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFE 654
Query: 216 -----------KPYGDSYL---------------KDIKIYSKDAQ-TGTNPC--GVNNGG 246
YG + +DI IY + Q +G N C + NGG
Sbjct: 655 DRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIIYHELVQPSGKNWCEEDMENGG 714
Query: 247 CAELCLY------NGVSAVCACAHGV-VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSD 299
C LCL + C+C +G + ++G+ C + YS +++ + S
Sbjct: 715 CEYLCLPAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDVNTTDILRTSG 774
Query: 300 L 300
L
Sbjct: 775 L 775
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 546 CAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMC 605
C + C L+ CDD CS + + L + R I+T C + +C G C
Sbjct: 200 CRTSSCIPLSWVCDD--------DADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGEC 251
Query: 606 IPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651
I CD +C D SDE + C R CRP F+C++ CI S
Sbjct: 252 IHKKWRCDGDPDCKDGSDE--VNCPSRTCRPDQFECEDGSCIHGSR 295
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
D ++C + C+E DF C +G C+P CD +C D SDE C MR CR C
Sbjct: 63 DEKNC-VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC 120
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-----DCRPGYFKCDNNKC 646
C H+F+C CIP + CD +C D+SDE + C + C +C + +C
Sbjct: 192 TCGAHEFQCRTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGEC 251
Query: 647 I 647
I
Sbjct: 252 I 252
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C F+C DG CI ++ C+ + +C D SDE + PG FKC + +CI
Sbjct: 277 TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECI 332
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
+N FKC G CI + CD+ +C D SDE + C + +C
Sbjct: 315 VNQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINEC 360
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 181/421 (42%), Gaps = 67/421 (15%)
Query: 224 KDIKIYSKDA--QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD--- 278
+D + +S + + TN C NNGGC+ +C + C C G DG C + D
Sbjct: 301 RDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQ 360
Query: 279 ----------------------AFIM--YSRV-------------NRIDSIHMT-DKSDL 300
F M ++RV NR + MT D+S+
Sbjct: 361 EPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVGSIGFLLFTNRHEVRKMTLDRSEY 420
Query: 301 NSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG----SNHRVLLERQG 356
S + +KN++ L + +++SD+ + I S + S ++
Sbjct: 421 TSLIPN------LKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYDAIISGDLH 474
Query: 357 SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRI 416
+ +GLA +++H +YWT D+ + + K R + + +PR I +D +
Sbjct: 475 APDGLAVDWIHGNIYWT---DSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFM 531
Query: 417 YWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDY 476
YWT+W + I++ +G S++T DI PN + LD + +L+W D++L I D
Sbjct: 532 YWTDWGTPA-KIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDV 590
Query: 477 DGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPM 534
+G R I+ + HPF +A+Y + ++WTD + A+ AN+ TG +V + KN+ P
Sbjct: 591 NGGGRKTILEDEKQLAHPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKNLMSPE 650
Query: 535 GIVAISDNLDACAKTPCRHL---NGNCDDICKL-----DETGQVVCSCFTGKVLMEDNRS 586
IV + C NG C +C + + C+C G +L +D RS
Sbjct: 651 DIVLFHNVTQPRGVNWCEATVLPNGGCQYMCLPAPQISAHSPKFTCACPDGMLLAKDMRS 710
Query: 587 C 587
C
Sbjct: 711 C 711
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLH----IAVDWIAQNIYWSD 106
+++WS+++++ I A MD + T +S Y A+ + +LH +AVDWI NIYW+D
Sbjct: 441 RIYWSDLSQR--KIYSAVMD---QGTSLS---YDAIISGDLHAPDGLAVDWIHGNIYWTD 492
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ VA G R L +P A+ VDP G+++W++ G I + GL+G
Sbjct: 493 SVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 552
Query: 167 TILAQEIIMPIKDITLDL----------KFFSAFYRNLSKGNIHIISLSNLSDVSTISMK 216
L E I ITLDL K S +++ G I S+
Sbjct: 553 YSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILEDEKQLAHPFSLA 612
Query: 217 PYGDS-YLKDI---KIYSKDAQTG----------------------TNPCGVN------- 243
Y D Y D+ I+S + TG T P GVN
Sbjct: 613 IYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKNLMSPEDIVLFHNVTQPRGVNWCEATVL 672
Query: 244 -NGGCAELCL-YNGVSA-----VCACAHG-VVAQDGKSC 274
NGGC +CL +SA CAC G ++A+D +SC
Sbjct: 673 PNGGCQYMCLPAPQISAHSPKFTCACPDGMLLAKDMRSC 711
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D C+ T CS +F+C DG CI CD+ ++C D SDE +CA C P +F+C+
Sbjct: 100 DELDCSPKT-CSLDEFRCQDGKCISRQFVCDQDWDCLDGSDEA--HCAATTCGPAHFRCN 156
Query: 643 NNKCILS 649
++ CI S
Sbjct: 157 SSSCIPS 163
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC 641
ED + +++ CS +F C CI + CD +C DKSDE CA+ CRP F+C
Sbjct: 187 EDTAAEVVSSPCSSLEFHCGSSECIHRSWVCDGAADCKDKSDEE--NCAVTTCRPDEFQC 244
Query: 642 DNNKCILSS 650
+ CI S
Sbjct: 245 ADGSCIHGS 253
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKC 641
D +C + T C +F+C+DG CI ++ CDR ++C D SDE G + D P FKC
Sbjct: 228 DEENCAV-TTCRPDEFQCADGSCIHGSRQCDREHDCKDMSDELGCINVTQCD-GPNKFKC 285
Query: 642 DNNKCI 647
+ +CI
Sbjct: 286 HSGECI 291
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILSS 650
C +++F+C DG CI CD C D SDE C CR G F C ++CI S
Sbjct: 27 CGKNEFQCRDGKCIVSKWVCDGSRECPDGSDESPETCMSVTCRSGEFSCGGRVSRCIPDS 86
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 581 MEDNRSCTINTVC-SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
M D C T C + FKC G CI ++ C+ +C D SDE I C +C
Sbjct: 265 MSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSARDCRDWSDEPIKECKTNEC 319
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 574 CFTGKVLMEDNRSCT----------INTVCSEHDFKCSDGM--CIPFNQTCDRVYNCHDK 621
C K + + +R C ++ C +F C + CIP + CD +C +
Sbjct: 39 CIVSKWVCDGSRECPDGSDESPETCMSVTCRSGEFSCGGRVSRCIPDSWRCDGRTDCENG 98
Query: 622 SDEGILYCAMRDCRPGYFKCDNNKCI 647
SDE L C+ + C F+C + KCI
Sbjct: 99 SDE--LDCSPKTCSLDEFRCQDGKCI 122
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 193/443 (43%), Gaps = 78/443 (17%)
Query: 202 ISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCA 261
ISL + D S + + D +K+ K TN C NNGGC+ +C + + C
Sbjct: 291 ISLDKVCD-SARDCQDWSDEPIKECK---------TNECLDNNGGCSHICKDLKIGSECL 340
Query: 262 CAHGVVAQDGKSCSEYD-------------------------AFIM--YSRV-------- 286
C G D C + D F M ++RV
Sbjct: 341 CPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVGSIG 400
Query: 287 -----NRIDSIHMT-DKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINS 340
NR + MT D+S+ S + +KN++ L + +++SD+ + I S
Sbjct: 401 YLLFTNRHEVRKMTLDRSEYTSLLPN------LKNVVALDTEVTNNRIYWSDLSQKKIYS 454
Query: 341 VFF----NGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
N S ++ E + +GLA +++H +YWT + +++ D K +R +
Sbjct: 455 ALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVK-RRTLFQ 513
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456
G +PR I +D +YWT+W + I++ +G S++T +I PN + LD
Sbjct: 514 EAGS--RPRAIVVDPVHGFMYWTDWGTPA-KIKKGGLNGVDIHSLVTENIQWPNGITLDL 570
Query: 457 QAEKLFWGDARLDKIERCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLR 514
+ +L+W D++L I D +G NR I+ + HPF +A+Y + ++WTD + A+
Sbjct: 571 SSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSLAIYEDKVYWTDVINEAIFS 630
Query: 515 ANKYTGEEVYTLRKNIRRPMGIVAISD-----NLDACAKTPCRHLNGNCDDICKL----- 564
AN+ TG +V + +N+ P IV ++ C T NG C +C
Sbjct: 631 ANRLTGSDVNLVAENLLSPEDIVLFHKVTQPRGVNWCETTA-LLPNGGCQYLCLPAPQIG 689
Query: 565 DETGQVVCSCFTGKVLMEDNRSC 587
+ + C+C G +L +D RSC
Sbjct: 690 PHSPKFTCACPDGMLLAKDMRSC 712
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 119/288 (41%), Gaps = 65/288 (22%)
Query: 51 KMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLH----IAVDWIAQNIYWSD 106
+++WS+++++ I A MD + Y + + +LH +AVDWI +NIYW+D
Sbjct: 441 RIYWSDLSQK--KIYSALMDQAPNLS------YDTIISEDLHAPDGLAVDWIHRNIYWTD 492
Query: 107 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166
+ VA G R L +P A+ VDP G+++W++ G I + GL+G
Sbjct: 493 SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 552
Query: 167 TILAQEIIMPIKDITLDL----------KFFSAFYRNLSKGNIHIISLSNLSDVSTISMK 216
L E I ITLDL K S +++ GN I S+
Sbjct: 553 HSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSLA 612
Query: 217 PYGDS-YLKDI---KIYSKDAQTG----------------------TNPCGVN------- 243
Y D Y D+ I+S + TG T P GVN
Sbjct: 613 IYEDKVYWTDVINEAIFSANRLTGSDVNLVAENLLSPEDIVLFHKVTQPRGVNWCETTAL 672
Query: 244 --NGGCAELCL------YNGVSAVCACAHG-VVAQDGKSC-SEYDAFI 281
NGGC LCL + CAC G ++A+D +SC +E D +
Sbjct: 673 LPNGGCQYLCLPAPQIGPHSPKFTCACPDGMLLAKDMRSCLTEVDTVL 720
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + C T CS+ DF+C DG CI CD +C D SDE +C C P +F+C+
Sbjct: 100 DEQGCPPKT-CSQDDFRCQDGKCISPQFVCDGDRDCLDGSDEA--HCQATTCGPAHFRCN 156
Query: 643 NNKCILS 649
++ CI S
Sbjct: 157 SSICIPS 163
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D S +++ CS +F C CI + CD +C DKSDE +CA+ CRP F+C
Sbjct: 188 DTASKGVSSPCSSLEFHCGSSECIHRSWVCDGEADCKDKSDEE--HCAVATCRPDEFQCA 245
Query: 643 NNKCILSS 650
+ CI S
Sbjct: 246 DGSCIHGS 253
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKC 641
D C + T C +F+C+DG CI ++ CDR ++C D SDE G + D P FKC
Sbjct: 228 DEEHCAVAT-CRPDEFQCADGSCIHGSRQCDREHDCKDMSDELGCVNVTQCD-GPNKFKC 285
Query: 642 DNNKCI 647
+ +CI
Sbjct: 286 HSGECI 291
Score = 39.7 bits (91), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 581 MEDNRSCTINTVC-SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
M D C T C + FKC G CI ++ CD +C D SDE I C +C
Sbjct: 265 MSDELGCVNVTQCDGPNKFKCHSGECISLDKVCDSARDCQDWSDEPIKECKTNEC 319
Score = 39.7 bits (91), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILSS 650
CS ++F+C DG CI CD C D SDE C C+ F C ++CI S
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPDS 86
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD---------CRPGYFKC 641
T C F+C+ +CIP CD +C D SDE C RD C F C
Sbjct: 146 TTCGPAHFRCNSSICIPSLWACDGDVDCVDGSDEWPQNCQGRDTASKGVSSPCSSLEFHC 205
Query: 642 DNNKCILSS 650
+++CI S
Sbjct: 206 GSSECIHRS 214
Score = 33.1 bits (74), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 589 INTVCSEHDFKCSDGM--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKC 646
++ C + F C + CIP + CD +C + SDE C + C F+C + KC
Sbjct: 64 MSVTCQSNQFSCGGRVSRCIPDSWRCDGQVDCENDSDE--QGCPPKTCSQDDFRCQDGKC 121
Query: 647 I 647
I
Sbjct: 122 I 122
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 193/426 (45%), Gaps = 76/426 (17%)
Query: 224 KDIKIYSKDA--QTGTNPCGVNNGGCAELCLYNGVSAVCACAHG--VVAQ---------- 269
+D + +S + + GTN C NNGGC+ +C + C C G +VAQ
Sbjct: 300 RDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ 359
Query: 270 DGKSCSEYD------------------------------AFIMYSRVNRIDSIHMT-DKS 298
D +CS+ A++ ++ NR + MT D+S
Sbjct: 360 DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFT--NRHEVRKMTLDRS 417
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG----SNHRVLLER 354
+ S ++RN ++ L + +++SD+ + I S + S++ ++ R
Sbjct: 418 EYTSLIPNLRN------VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 471
Query: 355 Q-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
+ +GLA +++H+ +YWT D+ + + + K + + KPR I +D
Sbjct: 472 DIQAPDGLAVDWIHSNIYWT---DSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH 528
Query: 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIER 473
+YWT+W + I++ +G S++T +I PN + LD + +L+W D++L I
Sbjct: 529 GFMYWTDWGTPA-KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 474 CDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIR 531
D +G NR I+ + HPF +AV+ + +FWTD + A+ AN+ TG +V L +N+
Sbjct: 588 IDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLL 647
Query: 532 RPMGIVAISD-----NLDACAKTPCRHLNGNCDDICKL-----DETGQVVCSCFTGKVLM 581
P +V + ++ C +T NG C +C + + C+C G +L
Sbjct: 648 SPEDMVLFHNLTQPRGVNWCERTTLS--NGGCQYLCLPAPQINPHSPKFTCACPDGMLLA 705
Query: 582 EDNRSC 587
D RSC
Sbjct: 706 RDMRSC 711
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 133/322 (41%), Gaps = 65/322 (20%)
Query: 21 EYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVV-TIEMAFMDGTKRETVVS 79
EY T+++ N N + ++++S +++WS+++++++ + ++ G V
Sbjct: 418 EY-TSLIPNLRNVVALDTEVAS-------NRIYWSDLSQRMICSTQLDRAHGVSSYDTVI 469
Query: 80 QKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVD 139
+ A +AVDWI NIYW+D + VA G R L +P A+ VD
Sbjct: 470 SRDIQAPDG----LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 140 PESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDL----------KFFSA 189
P G+++W++ G I + GL+G L E I ITLDL K S
Sbjct: 526 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 585
Query: 190 FYRNLSKGNIHIISLSNLSDVSTISMKPYGDS-YLKDI---KIYSKDAQTG--------- 236
+++ GN I S+ + D + DI I+S + TG
Sbjct: 586 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAEN 645
Query: 237 -------------TNPCGVN--------NGGCAELCL------YNGVSAVCACAHG-VVA 268
T P GVN NGGC LCL + CAC G ++A
Sbjct: 646 LLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLA 705
Query: 269 QDGKSC-SEYDAFIMYSRVNRI 289
+D +SC +E +A + + +
Sbjct: 706 RDMRSCLTEAEAAVATQETSTV 727
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRPGYFKC 641
D +C + T C +F+CSDG CI ++ CDR Y+C D SDE G + + + P FKC
Sbjct: 227 DEENCAVAT-CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCE-GPNKFKC 284
Query: 642 DNNKCI 647
+ +CI
Sbjct: 285 HSGECI 290
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + C T CS+ +F+C DG CI CD +C D SDE C + C P F+C+
Sbjct: 100 DEQGCPPKT-CSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCN 156
Query: 643 NNKCI 647
++ CI
Sbjct: 157 SSTCI 161
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651
CS +F C G CI + CD +C DKSDE CA+ CRP F+C + CI S
Sbjct: 197 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEE--NCAVATCRPDEFQCSDGNCIHGSR 253
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCI 647
C ++F+C DG CI + CD C D SDE C C+ G F C N+CI
Sbjct: 27 CERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCI 83
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 581 MEDNRSCTINTVC-SEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
M D C T+C + FKC G CI ++ C+ +C D SDE I C +C
Sbjct: 264 MSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNEC 318
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGM--CIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYF 639
E +C ++ C DF C + CIP CD +C + SDE C + C F
Sbjct: 58 ESQETC-LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE--QGCPPKTCSQDEF 114
Query: 640 KCDNNKCI 647
+C + KCI
Sbjct: 115 RCHDGKCI 122
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 569 QVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILY 628
Q VC + D SC + T C F+C+ CIP CD +C D SDE
Sbjct: 125 QFVCDSDRDCLDGSDEASCPVLT-CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQR 183
Query: 629 CA--------MRDCRPGYFKCDNNKCILSS 650
C C F C + +CI SS
Sbjct: 184 CRGLYVFQGDSSPCSAFEFHCLSGECIHSS 213
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 183/413 (44%), Gaps = 56/413 (13%)
Query: 234 QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRID-SI 292
+ G N C NNGGC+ +C + C C G D K C + + + +I ++
Sbjct: 310 ECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQKRCEDINECENPNTCTQICINL 369
Query: 293 HMTDKSDLNSPFE-----------------------SIRNSTM-----------MKNIIE 318
H K + ++ +R T+ +KN++
Sbjct: 370 HGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNVVA 429
Query: 319 LSYDYKRKTLFYSDIQKGTINSVFF----NGSNHRVLLERQ-GSVEGLAYEYVHNYLYWT 373
L + +++SD+ + I S N S+H ++ Q + +G+A +++H +YWT
Sbjct: 430 LDMEIASNKIYWSDLTQRKIYSASMDKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWT 489
Query: 374 CNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPS-IQRAF 432
+ +TI+ + + K + + L KPR I +D +YWT+W LP+ I++
Sbjct: 490 DSKFSTISVANTEGSKRKTLFTDDLA---KPRDIVVDPSQGFMYWTDWG--LPAKIEKGG 544
Query: 433 FSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNR-IVLSKISPL- 490
+G ++T +I PN + LD +++L+W D++L + D G NR VLS + L
Sbjct: 545 LNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSCIDITGENRRTVLSDETHLA 604
Query: 491 HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTP 550
HPF + ++ + +FWTD A+ A + TGE + + +++ P IV + A+
Sbjct: 605 HPFGLTIFEDLVFWTDIENEAIFSAKRLTGENIMKVAEHLLSPEDIVLYHNLRQPKAENW 664
Query: 551 CR--HL-NGNCDDICKL-----DETGQVVCSCFTGKVLMEDNRSCTINTVCSE 595
C HL NG C +C + + C+C G L D R+C V E
Sbjct: 665 CESHHLGNGGCGYLCLPAPHVNARSPKFTCACPDGMHLGTDMRNCMKEPVTQE 717
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 37 LSKISSIAVWPVKGKMFWSNVT-KQVVTIEMAFMDGTKR-ETVVS-QKKYPAVTACNLHI 93
L + ++ + K++WS++T +++ + M D T ETV+S Q + P I
Sbjct: 424 LKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHHETVISNQIQAPD------GI 477
Query: 94 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKI 153
AVDWI NIYW+D K + I VA G R L + + +P + VDP G+++W++ G
Sbjct: 478 AVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFTDDLAKPRDIVVDPSQGFMYWTDWGLP 537
Query: 154 PLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSN------L 207
I + GL+G + L + I ITLDL ++ + ++ I ++ L
Sbjct: 538 AKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSCIDITGENRRTVL 597
Query: 208 SDVSTISMKPYGDSYLKDIKIYS 230
SD + ++ P+G + +D+ ++
Sbjct: 598 SDETHLA-HPFGLTIFEDLVFWT 619
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D++ C + C F+C+DG CI ++ CDR Y+C D SDE + P FKC
Sbjct: 225 DDKDC-VKPTCRPDQFQCNDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCQGPDVFKCR 283
Query: 643 NNKCI 647
+ +CI
Sbjct: 284 SGECI 288
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILSS 650
C ++F+C DG CIP+ CD C D SDE C C F C N+CI S
Sbjct: 27 CDRNEFQCGDGKCIPYKWICDGSAECKDGSDESSETCRALTCGADQFSCGGRLNRCIPMS 86
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
C+ +F C G CI + CD Y+C KSD+ C CRP F+C++ CI S
Sbjct: 195 CAPLEFHCGSGECIHMSWKCDAGYDCKHKSDDKD--CVKPTCRPDQFQCNDGTCIHGS 250
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 581 MEDNRSCTINTVCSEHD-FKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDC 634
+ D C T C D FKC G CI ++ C + +C D +DE I C +C
Sbjct: 262 LSDEEGCVNVTKCQGPDVFKCRSGECITMDKVCHKKRDCRDWTDEPIKECGENEC 316
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 592 VCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRD-------CRPGYFKCDN 643
C+ F+C D G+CIP CD +C D SDE +C R+ C P F C +
Sbjct: 147 TCNPAMFQCKDKGICIPKLWACDGDRDCEDGSDED--HCEGREPIKTDKPCAPLEFHCGS 204
Query: 644 NKCI 647
+CI
Sbjct: 205 GECI 208
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 187/433 (43%), Gaps = 74/433 (17%)
Query: 224 KDIKIYSKDA--QTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYD--- 278
+D + +S + + G N C NNGGC+ +C + C C G D K C + +
Sbjct: 298 RDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQKRCEDINECE 357
Query: 279 ---------------------------------------AFIMYSRVNRIDSIHMT-DKS 298
A++ ++ NR + MT D+S
Sbjct: 358 NPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIGTVAYLFFT--NRHEVRKMTLDRS 415
Query: 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFF----NGSNHRVLLER 354
+ S +KN++ L + +++SD+ + I S N S+H ++
Sbjct: 416 EYTSVI------PRLKNVVALDMEIASNKIYWSDLTQRKIYSASMEKADNTSHHETVISN 469
Query: 355 Q-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413
Q + +G+A +++H +YWT D+ + I + + + + +KPR I +D
Sbjct: 470 QIQAPDGIAVDWIHGNIYWT---DSKFSTISVANTEGSKRRTPPSDDLEKPRDIVVDPSQ 526
Query: 414 SRIYWTNWNSHLPS-IQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIE 472
+YWT+W LP+ I++ +G ++T +I PN + LD ++L+W D++L +
Sbjct: 527 GFMYWTDWG--LPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLS 584
Query: 473 RCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNI 530
D G NR ++ + HPF + ++ + +FWTD A+ AN+ TG + + +++
Sbjct: 585 CIDVTGENRRTVISDETHLAHPFGLTIFEDLVFWTDIENEAIFSANRLTGRNIMKVAEDL 644
Query: 531 RRPMGIVAISDNLDACAKTPCR--HL-NGNCDDICK-----LDETGQVVCSCFTGKVLME 582
P IV + A+ C HL NG C+ +C + + C+C G L +
Sbjct: 645 LSPEDIVLYHNLRQPKAENWCEAHHLGNGGCEYLCLPAPHITARSPKFTCACPDGMHLGD 704
Query: 583 DNRSCTINTVCSE 595
D RSC V E
Sbjct: 705 DMRSCVKEPVIPE 717
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 63/303 (20%)
Query: 29 NESNDTSTLSKISSIAVWPVK---GKMFWSNVT-KQVVTIEMAFMDGTKR-ETVVS-QKK 82
+ S TS + ++ ++ ++ K++WS++T +++ + M D T ETV+S Q +
Sbjct: 413 DRSEYTSVIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMEKADNTSHHETVISNQIQ 472
Query: 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPES 142
P IAVDWI NIYW+D K + I VA G R S +++P + VDP
Sbjct: 473 APD------GIAVDWIHGNIYWTDSKFSTISVANTEGSKRRTPPSDDLEKPRDIVVDPSQ 526
Query: 143 GYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHII 202
G+++W++ G I + GL+G + L E I ITLDL ++ + ++ I
Sbjct: 527 GFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLSCI 586
Query: 203 SLSNLSDVSTIS-----MKPYGDSYLKDI---------KIYSKDAQTGTN---------- 238
++ + + IS P+G + +D+ I+S + TG N
Sbjct: 587 DVTGENRRTVISDETHLAHPFGLTIFEDLVFWTDIENEAIFSANRLTGRNIMKVAEDLLS 646
Query: 239 ------------PCGVN--------NGGCAELCL------YNGVSAVCACAHGV-VAQDG 271
P N NGGC LCL CAC G+ + D
Sbjct: 647 PEDIVLYHNLRQPKAENWCEAHHLGNGGCEYLCLPAPHITARSPKFTCACPDGMHLGDDM 706
Query: 272 KSC 274
+SC
Sbjct: 707 RSC 709
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSS 650
CS +F C G CI + CD ++C DKSDE C CRP F+C+ CI S
Sbjct: 195 CSPLEFHCGSGECIHMSWKCDGGFDCKDKSDEK--DCVKPTCRPDQFQCNTGTCIHGS 250
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKC- 641
D CT + VC++ F C G CI + CD +C D SDE YC C P F+C
Sbjct: 100 DENDCT-HKVCADDQFTCRSGKCISLDFVCDEDLDCDDGSDES--YCPAPTCNPAMFQCK 156
Query: 642 DNNKCI 647
D CI
Sbjct: 157 DKGICI 162
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDN--NKCILSS 650
C ++F+C DG CIP+ CD C D SDE C C F C N+CI S
Sbjct: 27 CDRNEFQCGDGKCIPYKWICDGSAECKDSSDESPETCREVTCGTDQFSCGGRLNRCIPMS 86
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 583 DNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642
D + C + C F+C+ G CI ++ CDR Y+C D SDE + P FKC
Sbjct: 225 DEKDC-VKPTCRPDQFQCNTGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCR 283
Query: 643 NNKCI 647
+ +CI
Sbjct: 284 SGECI 288
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 592 VCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAMRD-------CRPGYFKCDN 643
C+ F+C D G+CIP CD +C D SDE +C R+ C P F C +
Sbjct: 147 TCNPAMFQCKDKGICIPKLWACDGDPDCEDGSDEE--HCEGREPIKTDKPCSPLEFHCGS 204
Query: 644 NKCI 647
+CI
Sbjct: 205 GECI 208
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 160/696 (22%), Positives = 268/696 (38%), Gaps = 137/696 (19%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLH----IAVDWIAQNIYWSDP 107
++WSN+ E + K+ T Q + L I VDWI +NIY++D
Sbjct: 329 VYWSNLE------ENGYNTIVKKRTYHPQAPNEVIVTTGLALITGIDVDWITKNIYFADE 382
Query: 108 KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQT 167
+ I V G Y VLI D+P+ +A+ P G ++WS+ G P IA AG+DGK
Sbjct: 383 DNHCIGVCTNDGTYCTVLIKD-TDKPTGVALLPTQGKMYWSDWGTFPHIAVAGMDGKNVR 441
Query: 168 ILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSD---VSTISMKPYGDSYLK 224
I + K +T+D ++ + I + L + I +P+ + +
Sbjct: 442 IFVNVKLEWPKSVTIDYPNERLYWVDAKSKMIESVRLDGTDRRIVLHDIIQEPFSMTVFQ 501
Query: 225 DIKIYSKDAQTG-------------------------------------TNPCGVNNGGC 247
+ K+Y D ++ NPC N C
Sbjct: 502 N-KLYWSDWESNGIQTCNKFTGKDWKILIRNHNKPYSVHMDHSAIKPNIDNPCYSN--PC 558
Query: 248 AELCLYNGVSA-VCACA-------------------HGVVAQDGKSCSEYDAFIMYSRVN 287
++LC+ N C C H ++ Q K + Y F+ +V
Sbjct: 559 SQLCMLNQNKGYTCGCTLDKKLNADKHTCQDVKKNQHLLIIQGRKFINYYHEFLGKPKVM 618
Query: 288 RIDSIHMTDKSDLNSPFESIRNSTMMKNII---ELSYDYKRKT---LFYSDIQKG----- 336
+ HM+ +S N+ I + + II +LS + T L Y +
Sbjct: 619 TLSLQHMSQQS-YNNLVNIISDPLSGQIIICHLQLSTPFLTSTTDILRYDPVHHSSEKIV 677
Query: 337 TINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
TIN +FF LA++Y+ N LY T + +I I+L++ + +
Sbjct: 678 TINKIFFE----------------LAFDYIGNNLYTTNTVNQSIEVINLNT----KAMTA 717
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQ-----RAFFSGFGTESIITTDITMPN- 450
+ + P+ I + +S+++ + + SI +G G +I + P
Sbjct: 718 FYFKDEVPKYIALAPEESKMFVA-FQKSMHSISGLTLYEMQMNGLGKRKLIREGLIGPQL 776
Query: 451 ALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFW------ 504
+ D ++ LF D I T RI+ S + P + V G+ +FW
Sbjct: 777 PMYYDRDSKTLFVSDLLPGYIYSHSAQDT-RILRSGLKS--PHSLTVAGDNLFWIESQNK 833
Query: 505 ---TDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVA---------ISDNLDACAKTPCR 552
T++ +V + K ++ L N+ G + ++ D K C+
Sbjct: 834 LYSTNFRTASVKQ--KTVEFDLSKLNDNMTSLPGHLTPYSRDAQYVVTLRKDDIPKHDCQ 891
Query: 553 HLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSD-GMCIPFNQT 611
NGNC +C +C+C G L DNR+C + CS++++KCS+ +CI NQ
Sbjct: 892 KNNGNCSHVCLPSLITSFICACPPGMELSNDNRTCISHHECSKNEYKCSEHNICIQRNQL 951
Query: 612 CDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
CD + NC + DE C+ F C N CI
Sbjct: 952 CDGIENCPNGEDETSECRIKGRCKENQFMCKNGDCI 987
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 160/408 (39%), Gaps = 83/408 (20%)
Query: 240 CGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS-----EYDAFIMYSRVNRIDSIH 293
C VNN C +C AVC C G +A D SC E D R N I S
Sbjct: 1263 CTVNNF-CKGMCYKTPAGAVCGCQSGYRLAVDMISCEDINECELDICSQMCR-NTIGSYE 1320
Query: 294 MTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE 353
K + IRN + + ++ T+ +DI+K T N S ++L
Sbjct: 1321 CFCKDEF-----IIRNDKTSCKAVGPAMEFI--TVTDNDIRKMTHNL----HSTTQLLFP 1369
Query: 354 RQG-SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSC 412
G V GL V + +YW+ + TI K+++ + IV V++ +H P+ + +D
Sbjct: 1370 LMGVRVSGLDVNAVSDSVYWSNDEFGTIKKLNI---RTNEIVTVKIVEH--PQALAVDWI 1424
Query: 413 DSRIYWTNWNSHLPSIQRA-------------------------------FFSGFGTES- 440
+Y N NSHL +I+ F++ E+
Sbjct: 1425 TGNVY-VNDNSHLNTIKVCNLEKGKCATLVKIQDKMKVASVIVDSINRWLFWAEISLEAD 1483
Query: 441 -----------------IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIV 483
II +D+ + +DH KL+W D +E ++DG+ R V
Sbjct: 1484 HPTSKICRTDMTGADMKIIASDLGFVRGMTIDHVKSKLYWSDDFYKTVESSNFDGSQRKV 1543
Query: 484 LSKISPLHPFDMAVYGEFIFW--TDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISD 541
+ ++ H ++++ + +++ +D ++ + K + E V N+ R I+ IS
Sbjct: 1544 VLTLNMNHALSISIFEQSLYFLSSDNLLSSCKMYGKRSCEHVNIGANNVFRLFSILHISR 1603
Query: 542 NLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTI 589
+ PC CD +C L + C C G+ + E N +C I
Sbjct: 1604 QVP--FANPCDA--EYCDYMCVLKKEN-ATCICSDGESI-ESNSTCNI 1645
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-DCR-PGYFKCDNNKCILSS 650
C+ ++FKC++G CIP CD +C D DE C + C+ P FKC N CI S
Sbjct: 1053 CTSNEFKCNNGKCIPNTFVCDNDNDCEDGEDEAAEKCYSKIACKMPKMFKCPNGDCISDS 1112
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRD------CRPGYFKCDNN 644
T C + F+C+ G CIP ++ CD + +C D SDE C D C FKC N
Sbjct: 34 TKCEDGYFQCNSGECIPVDKKCDYIDHCIDGSDED-FECDHLDEKSFITCAKDQFKCKNQ 92
Query: 645 KCI 647
+CI
Sbjct: 93 ECI 95
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 108/281 (38%), Gaps = 54/281 (19%)
Query: 39 KISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWI 98
++S + V V ++WSN + TI+ + T V ++P +AVDWI
Sbjct: 1374 RVSGLDVNAVSDSVYWSN--DEFGTIKKLNI-RTNEIVTVKIVEHPQA------LAVDWI 1424
Query: 99 AQNIYWSDPKE-NVIEVARL-TGQYRYVLISGGVDQPSALAVDPESGYLFWSE-----SG 151
N+Y +D N I+V L G+ ++ + +++ VD + +LFW+E
Sbjct: 1425 TGNVYVNDNSHLNTIKVCNLEKGKCATLVKIQDKMKVASVIVDSINRWLFWAEISLEADH 1484
Query: 152 KIPLIARAGLDGKKQTILAQEI----IMPIKDITLDLKFFSAFYRNLSKGN--------I 199
I R + G I+A ++ M I + L + FY+ + N +
Sbjct: 1485 PTSKICRTDMTGADMKIIASDLGFVRGMTIDHVKSKLYWSDDFYKTVESSNFDGSQRKVV 1544
Query: 200 HIISLSNLSDVSTISMKPY---GDSYLKDIKIYSKDAQTGTNPCGVNN------------ 244
+++++ +S Y D+ L K+Y K + N G NN
Sbjct: 1545 LTLNMNHALSISIFEQSLYFLSSDNLLSSCKMYGKRSCEHVNI-GANNVFRLFSILHISR 1603
Query: 245 ----------GGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275
C +C+ +A C C+ G + +C+
Sbjct: 1604 QVPFANPCDAEYCDYMCVLKKENATCICSDGESIESNSTCN 1644
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 593 CSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCI 647
C +F+C CIP + CD +C D SDE C +C FKC+N KCI
Sbjct: 1013 CKSDEFQCKFTETCIPKTKMCDSNPDCDDLSDEED--CRKVECTSNEFKCNNGKCI 1066
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
C++ FKC + CIP + CD V +C D+SDE
Sbjct: 81 TCAKDQFKCKNQECIPAAKYCDMVNDCLDESDE 113
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 597 DFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
+FKCS G C+P+++ CD +C D SDE
Sbjct: 1228 EFKCSVGTCLPYSKVCDGNRDCPDGSDE 1255
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 582 EDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
+D ++CT C E++F C + CIP CD+ +C D SDE
Sbjct: 1171 DDEQNCT---YCFENEFACDNKRCIPELWVCDKANDCGDNSDE 1210
>sp|B4IXJ2|CUE_DROGR Protein cueball OS=Drosophila grimshawi GN=cue PE=3 SV=1
Length = 605
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 124/230 (53%), Gaps = 11/230 (4%)
Query: 300 LNSPFESIRNST-MMKNIIELSYDYKRKTLFYSDI--QKGTINSVFFNGSNHRVLLERQG 356
LNS + I S +++ L++D + +++SD Q G+I ++ + S ++++R G
Sbjct: 26 LNSTWGEIHASAHRFEDLSALAFDEAEEMIYFSDQTHQNGSIFALRRDDSTP-IVVQRTG 84
Query: 357 --SVEGLAYEYVHNYLYWTCNNDATI--NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSC 412
SVEGLAY+ ++ L+W I + +D + + +++V G+ +P GI +D C
Sbjct: 85 NDSVEGLAYDPLNRNLFWADMRQQKIFFSSVDTLATELPKVLVDLSGEGGQPDGIAVDIC 144
Query: 413 DSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLD--- 469
++YWTN N S++R G G ++II+ DI MP + +D ++++FW D ++
Sbjct: 145 RRQLYWTNGNIKSASVERIGLDGKGRQTIISADIDMPRGIVVDQLSDRIFWVDNKVGIFF 204
Query: 470 KIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYT 519
IE DG++R V+ K P +A+ + I+WTD + AV K T
Sbjct: 205 AIESARLDGSDRQVVVKGKHQDPKHLAINEDAIYWTDRMDKAVWSYPKPT 254
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 43 IAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNI 102
IAV + +++W+N + ++E +DG R+T++S A I VD ++ I
Sbjct: 139 IAVDICRRQLYWTNGNIKSASVERIGLDGKGRQTIIS-----ADIDMPRGIVVDQLSDRI 193
Query: 103 YWSDPKENV---IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 149
+W D K + IE ARL G R V++ G P LA++ ++ ++W++
Sbjct: 194 FWVDNKVGIFFAIESARLDGSDRQVVVKGKHQDPKHLAINEDA--IYWTD 241
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 40 ISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVV----SQKKYPAVTACNLHIAV 95
+ +A P+ +FW+++ +Q + T+ V+ + P IAV
Sbjct: 88 VEGLAYDPLNRNLFWADMRQQKIFFSSVDTLATELPKVLVDLSGEGGQPD------GIAV 141
Query: 96 DWIAQNIYWSDP--KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES--G 151
D + +YW++ K +E L G+ R +IS +D P + VD S +FW ++ G
Sbjct: 142 DICRRQLYWTNGNIKSASVERIGLDGKGRQTIISADIDMPRGIVVDQLSDRIFWVDNKVG 201
Query: 152 KIPLIARAGLDGKKQTILAQ 171
I A LDG + ++ +
Sbjct: 202 IFFAIESARLDGSDRQVVVK 221
>sp|P14543|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3
Length = 1247
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 126/267 (47%), Gaps = 16/267 (5%)
Query: 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYW 372
K II L++D K ++++DI + +I +G ++ + GS EG+A +++ ++W
Sbjct: 978 KVIIGLAFDCVDKMVYWTDITEPSIGRASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFW 1037
Query: 373 TCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAF 432
T +N I LD + + + L PRGI DS +YWT+WN P I+ ++
Sbjct: 1038 TDSNLDRIEVAKLDGTQRRVLFETDL---VNPRGIVTDSVRGNLYWTDWNRDNPKIETSY 1094
Query: 433 FSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCD-YDGTNRIVLSKISPLH 491
G ++ D+ +PN L D + +L W DA ++ E + + R L + +
Sbjct: 1095 MDGTNRRILVQDDLGLPNGLTFDAFSSQLCWVDAGTNRAECLNPSQPSRRKALEGLQ--Y 1152
Query: 492 PFDMAVYGEFIFWTDWVIHAVLRANKYTGEE--VYTLRKNIRRPMGIVAISDNLDACAKT 549
PF + YG+ +++TDW +++V+ + +E + K R + I+ L C +
Sbjct: 1153 PFAVTSYGKNLYFTDWKMNSVVALDLAISKETDAFQPHKQTR----LYGITTALSQCPQG 1208
Query: 550 P--CRHLNGNCDDICKLDETGQVVCSC 574
C NG C +C L G C C
Sbjct: 1209 HNYCSVNNGGCTHLC-LATPGSRTCRC 1234
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W+++T+ +I A + G + T++ Q IAVD + +NI+W+D +
Sbjct: 992 VYWTDITEP--SIGRASLHGGEPTTIIRQD-----LGSPEGIAVDHLGRNIFWTDSNLDR 1044
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKI-PLIARAGLDGKKQTILA 170
IEVA+L G R VL + P + D G L+W++ + P I + +DG + IL
Sbjct: 1045 IEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYWTDWNRDNPKIETSYMDGTNRRILV 1104
Query: 171 QEIIMPIKDITLD--------------------------------LKF---FSAFYRNLS 195
Q+ + +T D L++ +++ +NL
Sbjct: 1105 QDDLGLPNGLTFDAFSSQLCWVDAGTNRAECLNPSQPSRRKALEGLQYPFAVTSYGKNLY 1164
Query: 196 ----KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELC 251
K N +++L T + +P+ + L I G N C VNNGGC LC
Sbjct: 1165 FTDWKMN-SVVALDLAISKETDAFQPHKQTRLYGITTALSQCPQGHNYCSVNNGGCTHLC 1223
Query: 252 LYNGVSAVCACAHGVVAQD 270
L S C C + D
Sbjct: 1224 LATPGSRTCRCPDNTLGVD 1242
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 91 LHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES 150
+ +A D + + +YW+D E I A L G +I + P +AVD +FW++S
Sbjct: 981 IGLAFDCVDKMVYWTDITEPSIGRASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFWTDS 1040
Query: 151 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHI 201
+ I A LDG ++ +L + ++ + I D + ++ + ++ N I
Sbjct: 1041 -NLDRIEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYWTDWNRDNPKI 1090
>sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=3
Length = 1375
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 19/250 (7%)
Query: 280 FIMYSRVNRIDSIHMTD---KSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKG 336
F++Y++ +I + + + D S+ S I+ + YD + + ++++D+
Sbjct: 1109 FLLYTQGQQIGYLPLNGTRLQKDAAKTLLSLHGSI----IVGIDYDCRERMVYWTDVAGR 1164
Query: 337 TINSVFFNGSNHRVLLERQG--SVEGLAYEYVHNYLYWTCNNDATINKID---LDSPKAQ 391
TI+ + G S EGLA +++ +YWT D+ ++KI+ LD + +
Sbjct: 1165 TISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWT---DSVLDKIESALLDGSERK 1221
Query: 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNA 451
+ L PR I +D +YWT+WN P I+ + G +I TDI +PN
Sbjct: 1222 VLFYTDL---VNPRAIAVDPIRGNLYWTDWNREAPKIETSSLDGENRRILINTDIGLPNG 1278
Query: 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHA 511
L D ++ L W DA K+E DGT R V+ + +PF + Y + + TDW
Sbjct: 1279 LTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQN-NLKYPFSIVSYADHFYHTDWRRDG 1337
Query: 512 VLRANKYTGE 521
V+ NK++G+
Sbjct: 1338 VVSVNKHSGQ 1347
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 52 MFWSNVTKQVVTIEMAFMD-GTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKEN 110
++W++V + TI A ++ G + ET+V+ ++ L A+D I + +YW+D +
Sbjct: 1156 VYWTDVAGR--TISRAGLELGAEPETIVNSG---LISPEGL--AIDHIRRTMYWTDSVLD 1208
Query: 111 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKKQTIL 169
IE A L G R VL + P A+AVDP G L+W++ + + P I + LDG+ + IL
Sbjct: 1209 KIESALLDGSERKVLFYTDLVNPRAIAVDPIRGNLYWTDWNREAPKIETSSLDGENRRIL 1268
Query: 170 AQEIIMPIKDITLD 183
I +T D
Sbjct: 1269 INTDIGLPNGLTFD 1282
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 35 STLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIA 94
S L +A+ ++ M+W++ + IE A +DG++R+ + IA
Sbjct: 1183 SGLISPEGLAIDHIRRTMYWTDSV--LDKIESALLDGSERKVLFYTD-----LVNPRAIA 1235
Query: 95 VDWIAQNIYWSD-----PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 149
VD I N+YW+D PK IE + L G+ R +LI+ + P+ L DP S L W++
Sbjct: 1236 VDPIRGNLYWTDWNREAPK---IETSSLDGENRRILINTDIGLPNGLTFDPFSKLLCWAD 1292
Query: 150 SGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR 192
+G L DG + ++ + P ++ F+ +R
Sbjct: 1293 AGTKKLECTL-PDGTGRRVIQNNLKYPFSIVSYADHFYHTDWR 1334
>sp|O88322|NID2_MOUSE Nidogen-2 OS=Mus musculus GN=Nid2 PE=1 SV=2
Length = 1403
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 7/244 (2%)
Query: 280 FIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTIN 339
F++Y++ +I + + + S L S ++ + YD + + ++++D+ TI+
Sbjct: 1137 FLLYAQGQQIGHLPL-NGSRLQKDAARTLLSLHGSIVVGIDYDCRERMVYWTDVAGRTIS 1195
Query: 340 SVFFNGSNHRVLLERQG--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVR 397
+ G S EGLA ++ +YWT + I + +LD + + +
Sbjct: 1196 RASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIERAELDGSERKVLFHTD 1255
Query: 398 LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQ 457
L PR I +D +YWT+WN P I+ + G +I DI +PN L D
Sbjct: 1256 L---VNPRAITVDPIRGNLYWTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPF 1312
Query: 458 AEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANK 517
++ L W DA K+E DGT R V+ +PF + Y + + TDW V+ NK
Sbjct: 1313 SKLLCWADAGTKKLECTLPDGTGRRVIQNHL-NYPFSIVSYADHFYHTDWRRDGVISVNK 1371
Query: 518 YTGE 521
+G+
Sbjct: 1372 DSGQ 1375
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 52 MFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111
++W++V + ++ + G + ET+++ ++ L A+D + +YW+D +
Sbjct: 1184 VYWTDVAGRTIS-RASLEAGAEPETIITSG---LISPEGL--AIDHFRRTMYWTDSGLDK 1237
Query: 112 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKKQTILA 170
IE A L G R VL + P A+ VDP G L+W++ + + P I + LDG+ + IL
Sbjct: 1238 IERAELDGSERKVLFHTDLVNPRAITVDPIRGNLYWTDWNREAPKIETSSLDGENRRILI 1297
Query: 171 QEIIMPIKDITLD 183
+ I +T D
Sbjct: 1298 NKDIGLPNGLTFD 1310
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 34 TSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHI 93
TS L +A+ + M+W++ + IE A +DG++R+ + I
Sbjct: 1210 TSGLISPEGLAIDHFRRTMYWTD--SGLDKIERAELDGSERKVLFHTD-----LVNPRAI 1262
Query: 94 AVDWIAQNIYWSD-----PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWS 148
VD I N+YW+D PK IE + L G+ R +LI+ + P+ L DP S L W+
Sbjct: 1263 TVDPIRGNLYWTDWNREAPK---IETSSLDGENRRILINKDIGLPNGLTFDPFSKLLCWA 1319
Query: 149 ESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLS 208
++G L DG + ++ + P ++ F+ +R +IS++ S
Sbjct: 1320 DAGTKKLECTL-PDGTGRRVIQNHLNYPFSIVSYADHFYHTDWRRDG-----VISVNKDS 1373
Query: 209 DVSTISMKPYGDSYLKDIKIYSKDAQTG 236
T P S+L I TG
Sbjct: 1374 GQFTDEFLPEQRSHLYGITAVYPYCPTG 1401
>sp|B4QMF4|CUE_DROSI Protein cueball OS=Drosophila simulans GN=cue PE=3 SV=1
Length = 644
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 319 LSYDYKRKTLFYSDIQ--KGTINSVFFN--GSNH--RVLLERQG--SVEGLAYEYVHNYL 370
L++D + ++++D++ G+I S+ + +NH + R G SV GLAY+ ++ L
Sbjct: 64 LTFDESEELIYFNDLKHRNGSIFSLKRDLIAANHVAEQTIARTGNESVGGLAYDPLNMNL 123
Query: 371 YWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQR 430
+W+ I + +++V + +P G+ +D C ++YWTN N P+++R
Sbjct: 124 FWSDTEQRKIFFAPIHGSVTPKVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVER 183
Query: 431 AFFSGFGTESIITTDITMPNALALDHQAEKLFWGD---ARLDKIERCDYDGTNRIVLSKI 487
G II +DI MP + +D +++LFW D +E C DG++R V+ K
Sbjct: 184 INLDGSNRTVIINSDIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESCKLDGSDRQVVLKD 243
Query: 488 SPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528
P ++AV + I+WTD AV K +V T K
Sbjct: 244 KHHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKVTTTSK 284
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 6 SSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIE 65
S Q KI + G +L + S + + +AV + K++W+N T+E
Sbjct: 126 SDTEQRKIFFAPIHGSVTPKVLVDLSAEGG---RPDGVAVDVCRRKLYWTNSNVTHPTVE 182
Query: 66 MAFMDGTKRETVV-SQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV---IEVARLTGQY 121
+DG+ R ++ S P I VD ++ ++W D + V +E +L G
Sbjct: 183 RINLDGSNRTVIINSDIDMPR------GIVVDQLSDRLFWIDDLKGVFFSVESCKLDGSD 236
Query: 122 RYVLISGGVDQPSALAVDPESGY-------LFWSESGKIPLI 156
R V++ +P LAV ++ Y WS K+P+I
Sbjct: 237 RQVVLKDKHHEPLNLAVTNDAIYWTDRTTRAVWSHP-KVPVI 277
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 40 ISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIA 99
+ +A P+ +FWS+ ++ I A + G+ V+ A +AVD
Sbjct: 111 VGGLAYDPLNMNLFWSDTEQR--KIFFAPIHGSVTPKVLVD--LSAEGGRPDGVAVDVCR 166
Query: 100 QNIYW--SDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE--SGKIPL 155
+ +YW S+ +E L G R V+I+ +D P + VD S LFW + G
Sbjct: 167 RKLYWTNSNVTHPTVERINLDGSNRTVIINSDIDMPRGIVVDQLSDRLFWIDDLKGVFFS 226
Query: 156 IARAGLDGK-KQTILAQEIIMPI 177
+ LDG +Q +L + P+
Sbjct: 227 VESCKLDGSDRQVVLKDKHHEPL 249
>sp|B4HVU2|CUE_DROSE Protein cueball OS=Drosophila sechellia GN=cue PE=3 SV=1
Length = 644
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 319 LSYDYKRKTLFYSDIQ--KGTINSVFFN--GSNH--RVLLERQG--SVEGLAYEYVHNYL 370
L++D + ++++D++ G+I S+ + +NH + R G SV GLAY+ ++ L
Sbjct: 64 LTFDESEELIYFNDLKHRNGSIFSLKRDLVAANHVAEQTIARTGNESVGGLAYDPLNMNL 123
Query: 371 YWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQR 430
+W+ I + +++V + +P G+ +D C ++YWTN N P+++R
Sbjct: 124 FWSDTEQRKIFFAPIYGSATPKVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVER 183
Query: 431 AFFSGFGTESIITTDITMPNALALDHQAEKLFWGD---ARLDKIERCDYDGTNRIVLSKI 487
G II +DI MP + +D +++LFW D +E C DG++R V+ K
Sbjct: 184 INLDGSNRTVIINSDIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESCKLDGSDRQVVLKD 243
Query: 488 SPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528
P ++AV + I+WTD AV K +V T K
Sbjct: 244 KHHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKVTTTSK 284
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 9/143 (6%)
Query: 40 ISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIA 99
+ +A P+ +FWS+ ++ + + T + V A +AVD
Sbjct: 111 VGGLAYDPLNMNLFWSDTEQRKIFFAPIYGSATPKVLV----DLSAEGGRPDGVAVDVCR 166
Query: 100 QNIYW--SDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE--SGKIPL 155
+ +YW S+ +E L G R V+I+ +D P + VD S LFW + G
Sbjct: 167 RKLYWTNSNVTHPTVERINLDGSNRTVIINSDIDMPRGIVVDQLSDRLFWIDDLKGVFFS 226
Query: 156 IARAGLDGK-KQTILAQEIIMPI 177
+ LDG +Q +L + P+
Sbjct: 227 VESCKLDGSDRQVVLKDKHHEPL 249
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 5 VSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVV-T 63
V+ PT +I NL+G +T I++ S + I V + ++FW + K V +
Sbjct: 176 VTHPTVERI---NLDGSNRTVIIN------SDIDMPRGIVVDQLSDRLFWIDDLKGVFFS 226
Query: 64 IEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNI--YWSDPKENVIEV 114
+E +DG+ R+ V+ K + + + A+ W + WS PK VI+V
Sbjct: 227 VESCKLDGSDRQVVLKDKHHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKV 279
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,391,177
Number of Sequences: 539616
Number of extensions: 10564312
Number of successful extensions: 27093
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 23067
Number of HSP's gapped (non-prelim): 2064
length of query: 652
length of database: 191,569,459
effective HSP length: 124
effective length of query: 528
effective length of database: 124,657,075
effective search space: 65818935600
effective search space used: 65818935600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)