Query psy5768
Match_columns 652
No_of_seqs 340 out of 3177
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:31:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a0p_A LRP6, LRP-6, low-densit 100.0 1.5E-99 5E-104 859.2 70.4 563 2-588 8-620 (628)
2 3s94_A LRP-6, low-density lipo 100.0 4.9E-97 2E-101 838.1 68.5 556 9-588 16-618 (619)
3 3v64_C Agrin; beta propeller, 100.0 5.1E-62 1.8E-66 516.1 38.6 338 237-588 1-343 (349)
4 3p5b_L Low density lipoprotein 100.0 2.9E-59 1E-63 503.8 42.1 342 235-588 38-398 (400)
5 3v65_B Low-density lipoprotein 100.0 1.2E-58 4.2E-63 497.0 40.0 339 235-587 42-385 (386)
6 3m0c_C LDL receptor, low-densi 100.0 3E-57 1E-61 522.3 42.1 342 235-588 350-710 (791)
7 3sov_A LRP-6, low-density lipo 100.0 7.9E-54 2.7E-58 446.8 39.3 304 276-588 2-309 (318)
8 1ijq_A LDL receptor, low-densi 100.0 2.4E-51 8.3E-56 428.5 40.4 300 278-588 1-316 (316)
9 4a0p_A LRP6, LRP-6, low-densit 100.0 7.8E-52 2.7E-56 468.7 39.2 301 276-588 4-306 (628)
10 1n7d_A LDL receptor, low-densi 100.0 7.7E-53 2.6E-57 483.8 23.2 343 235-589 332-693 (699)
11 3s94_A LRP-6, low-density lipo 100.0 1.3E-45 4.5E-50 417.4 54.4 466 2-498 53-570 (619)
12 3v64_C Agrin; beta propeller, 100.0 4.8E-40 1.6E-44 347.7 32.2 259 2-277 46-344 (349)
13 3sov_A LRP-6, low-density lipo 100.0 3.6E-40 1.2E-44 343.6 30.3 260 1-277 5-310 (318)
14 3p5b_L Low density lipoprotein 100.0 1.8E-39 6E-44 349.5 33.8 258 2-276 85-398 (400)
15 1ijq_A LDL receptor, low-densi 100.0 6.8E-39 2.3E-43 334.3 35.0 258 1-275 2-315 (316)
16 3v65_B Low-density lipoprotein 100.0 6.3E-39 2.2E-43 343.8 33.5 257 2-275 89-385 (386)
17 3m0c_C LDL receptor, low-densi 100.0 2.5E-38 8.5E-43 364.8 34.5 257 2-275 397-709 (791)
18 1n7d_A LDL receptor, low-densi 100.0 5.1E-35 1.8E-39 335.8 13.4 259 2-276 379-692 (699)
19 1npe_A Nidogen, entactin; glyc 100.0 2.1E-30 7.2E-35 263.0 36.3 256 278-540 1-260 (267)
20 1npe_A Nidogen, entactin; glyc 99.9 1.5E-24 5.1E-29 219.7 33.4 179 2-195 3-187 (267)
21 3s25_A Hypothetical 7-bladed b 99.9 1.1E-24 3.8E-29 224.2 28.7 272 141-526 24-299 (302)
22 3s25_A Hypothetical 7-bladed b 99.8 6.9E-18 2.4E-22 173.5 30.1 264 98-486 24-301 (302)
23 3tc9_A Hypothetical hydrolase; 99.8 1.5E-17 5.1E-22 180.2 29.9 261 36-386 135-429 (430)
24 3tc9_A Hypothetical hydrolase; 99.8 7.7E-18 2.6E-22 182.4 23.8 203 312-521 135-372 (430)
25 3hrp_A Uncharacterized protein 99.8 2.4E-16 8.2E-21 169.7 30.5 246 83-434 130-409 (409)
26 4hw6_A Hypothetical protein, I 99.7 7.9E-17 2.7E-21 174.5 23.3 202 312-521 137-375 (433)
27 3hrp_A Uncharacterized protein 99.7 9.5E-16 3.3E-20 165.0 29.0 204 312-522 129-357 (409)
28 2qc5_A Streptogramin B lactona 99.7 1.5E-14 5.1E-19 147.1 34.6 280 83-477 19-299 (300)
29 2qc5_A Streptogramin B lactona 99.7 2E-14 6.8E-19 146.2 35.3 279 36-433 18-298 (300)
30 4hw6_A Hypothetical protein, I 99.7 1.9E-15 6.6E-20 163.6 29.1 227 279-517 153-431 (433)
31 3fvz_A Peptidyl-glycine alpha- 99.7 7.4E-15 2.5E-19 153.1 31.4 157 34-199 20-220 (329)
32 3kya_A Putative phosphatase; s 99.7 1.1E-14 3.8E-19 157.9 30.6 266 36-388 137-476 (496)
33 2z2n_A Virginiamycin B lyase; 99.7 8.8E-14 3E-18 141.3 35.2 288 124-520 8-296 (299)
34 3kya_A Putative phosphatase; s 99.7 2.1E-14 7.1E-19 155.8 30.5 233 279-518 152-474 (496)
35 2z2n_A Virginiamycin B lyase; 99.7 9.4E-14 3.2E-18 141.1 33.8 281 83-478 14-295 (299)
36 3fvz_A Peptidyl-glycine alpha- 99.7 3E-14 1E-18 148.4 27.9 223 312-538 22-299 (329)
37 1rwi_B Serine/threonine-protei 99.7 1.1E-14 3.8E-19 146.2 22.9 195 315-520 25-223 (270)
38 1q7f_A NHL, brain tumor CG1071 99.6 3.5E-13 1.2E-17 136.8 29.8 261 17-386 10-279 (286)
39 3vgz_A Uncharacterized protein 99.6 7.2E-12 2.5E-16 130.3 40.4 279 38-422 41-334 (353)
40 1rwi_B Serine/threonine-protei 99.6 1.8E-14 6.3E-19 144.6 19.3 196 314-519 67-264 (270)
41 3g4e_A Regucalcin; six bladed 99.6 1.6E-13 5.4E-18 140.8 26.3 216 313-537 12-247 (297)
42 2fp8_A Strictosidine synthase; 99.6 3.5E-13 1.2E-17 139.8 28.8 258 126-484 14-319 (322)
43 2fp8_A Strictosidine synthase; 99.6 1.6E-13 5.5E-18 142.4 21.9 208 312-527 17-276 (322)
44 1q7f_A NHL, brain tumor CG1071 99.6 1E-12 3.4E-17 133.3 26.8 207 312-527 28-245 (286)
45 2p4o_A Hypothetical protein; p 99.5 1.6E-12 5.4E-17 134.0 25.0 212 314-538 32-262 (306)
46 3dsm_A Uncharacterized protein 99.5 1.3E-11 4.3E-16 128.5 30.3 289 101-498 3-320 (328)
47 3e5z_A Putative gluconolactona 99.5 2.8E-12 9.5E-17 130.9 23.8 204 312-527 26-253 (296)
48 3dsm_A Uncharacterized protein 99.5 1.2E-11 4.2E-16 128.6 28.7 234 286-539 63-320 (328)
49 3dr2_A Exported gluconolactona 99.5 2.4E-12 8.2E-17 132.4 22.6 206 311-527 42-274 (305)
50 2fyj_A Low-density lipoprotein 99.5 3E-14 1E-18 115.2 6.0 59 591-651 3-63 (82)
51 2ism_A Putative oxidoreductase 99.5 3.7E-12 1.3E-16 134.0 23.2 203 311-519 28-297 (352)
52 1ri6_A Putative isomerase YBHE 99.5 5.5E-10 1.9E-14 115.2 38.4 312 2-415 6-336 (343)
53 2fcw_B LDL receptor, low-densi 99.5 1.1E-14 3.9E-19 116.8 2.2 58 592-651 2-59 (80)
54 1ri6_A Putative isomerase YBHE 99.5 3.3E-10 1.1E-14 116.9 35.9 311 48-461 3-337 (343)
55 3a9g_A Putative uncharacterize 99.4 1.2E-10 4.2E-15 122.4 32.1 149 36-196 27-218 (354)
56 3hfq_A Uncharacterized protein 99.4 1.2E-09 4E-14 113.7 38.7 283 129-499 38-341 (347)
57 2ism_A Putative oxidoreductase 99.4 4.2E-11 1.4E-15 125.9 26.6 148 36-195 29-222 (352)
58 3g4e_A Regucalcin; six bladed 99.4 1.8E-10 6.2E-15 117.8 29.8 236 36-376 11-262 (297)
59 3u4y_A Uncharacterized protein 99.4 5.9E-10 2E-14 114.9 32.8 289 94-483 4-309 (331)
60 3a9g_A Putative uncharacterize 99.4 1.2E-10 3.9E-15 122.6 27.4 203 311-519 26-296 (354)
61 2g8s_A Glucose/sorbosone dehyd 99.4 2.9E-10 1E-14 119.5 28.5 274 36-384 16-351 (353)
62 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 6.8E-11 2.3E-15 121.0 22.6 219 311-537 15-274 (314)
63 3u4y_A Uncharacterized protein 99.4 6.2E-09 2.1E-13 107.2 37.5 179 2-197 11-198 (331)
64 3e5z_A Putative gluconolactona 99.3 3E-10 1E-14 115.7 27.0 241 36-388 26-287 (296)
65 3bws_A Protein LP49; two-domai 99.3 2.6E-08 8.7E-13 106.7 43.1 332 38-478 61-432 (433)
66 3vgz_A Uncharacterized protein 99.3 9.9E-10 3.4E-14 114.0 30.9 210 314-527 41-270 (353)
67 3qqz_A Putative uncharacterize 99.3 1.3E-09 4.4E-14 108.3 29.6 203 314-519 27-253 (255)
68 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 7.1E-10 2.4E-14 113.4 28.2 155 317-478 120-299 (314)
69 3hfq_A Uncharacterized protein 99.3 1.1E-08 3.6E-13 106.5 37.2 289 2-389 4-319 (347)
70 2dg1_A DRP35, lactonase; beta 99.3 9E-10 3.1E-14 113.9 28.0 207 314-527 45-270 (333)
71 3dr2_A Exported gluconolactona 99.3 1.5E-09 5E-14 111.4 29.3 147 36-195 43-208 (305)
72 1l0q_A Surface layer protein; 99.3 3.3E-08 1.1E-12 104.2 40.3 271 2-387 3-275 (391)
73 2p4o_A Hypothetical protein; p 99.3 6.2E-10 2.1E-14 114.4 25.7 210 281-509 45-279 (306)
74 2g8s_A Glucose/sorbosone dehyd 99.3 3.9E-10 1.3E-14 118.5 23.9 207 311-521 15-310 (353)
75 2qe8_A Uncharacterized protein 99.3 2.6E-10 8.8E-15 119.3 22.2 217 314-538 17-298 (343)
76 3scy_A Hypothetical bacterial 99.3 2.1E-08 7.1E-13 104.9 37.0 179 315-497 156-359 (361)
77 3das_A Putative oxidoreductase 99.3 1.1E-09 3.7E-14 113.8 26.2 224 311-539 29-316 (347)
78 2ghs_A AGR_C_1268P; regucalcin 99.3 1.5E-09 5.3E-14 112.5 27.1 203 314-527 49-267 (326)
79 1nir_A Nitrite reductase; hemo 99.3 8.4E-08 2.9E-12 106.7 42.0 352 94-540 144-536 (543)
80 1l0q_A Surface layer protein; 99.2 6.7E-08 2.3E-12 101.8 39.2 281 100-485 2-282 (391)
81 2qe8_A Uncharacterized protein 99.2 5.1E-10 1.7E-14 117.1 21.7 192 313-512 66-314 (343)
82 2dg1_A DRP35, lactonase; beta 99.2 1.4E-08 4.8E-13 104.8 32.1 149 36-195 43-202 (333)
83 2kny_A LRP-1, linker, APO-E; l 99.2 2.1E-12 7.2E-17 103.2 0.6 61 591-651 7-72 (80)
84 3scy_A Hypothetical bacterial 99.2 7.5E-08 2.6E-12 100.6 35.7 203 316-523 102-343 (361)
85 3bws_A Protein LP49; two-domai 99.2 7.1E-08 2.4E-12 103.2 35.5 292 38-435 123-432 (433)
86 1qks_A Cytochrome CD1 nitrite 99.1 8.9E-07 3E-11 98.7 42.7 355 94-541 162-561 (567)
87 3das_A Putative oxidoreductase 99.1 1.3E-07 4.3E-12 98.2 32.9 249 36-375 30-326 (347)
88 1d2l_A Lipoprotein receptor re 99.1 5.7E-11 1.9E-15 83.5 4.5 41 590-630 3-43 (45)
89 2ghs_A AGR_C_1268P; regucalcin 99.1 1.8E-07 6.1E-12 96.8 32.2 144 37-196 48-200 (326)
90 2p9w_A MAL S 1 allergenic prot 99.0 2.7E-08 9.4E-13 101.4 23.1 204 315-522 14-268 (334)
91 1jof_A Carboxy-CIS,CIS-muconat 99.0 4.2E-07 1.4E-11 95.4 33.2 167 315-481 146-344 (365)
92 3sre_A PON1, serum paraoxonase 99.0 1.8E-08 6E-13 105.1 21.1 195 316-518 52-297 (355)
93 1cru_A Protein (soluble quinop 99.0 9.7E-08 3.3E-12 103.5 27.6 149 36-195 25-247 (454)
94 1nir_A Nitrite reductase; hemo 99.0 6.1E-06 2.1E-10 91.6 42.3 344 45-496 145-533 (543)
95 3sjl_D Methylamine dehydrogena 99.0 1.6E-07 5.4E-12 98.8 27.6 299 94-457 39-384 (386)
96 2iwa_A Glutamine cyclotransfer 99.0 1.9E-07 6.6E-12 93.1 26.4 191 315-518 22-236 (266)
97 3c75_H MADH, methylamine dehyd 99.0 1.1E-07 3.9E-12 101.6 25.8 233 280-526 86-409 (426)
98 2m0p_A Low-density lipoprotein 99.0 1E-10 3.5E-15 84.2 1.2 37 590-626 4-40 (52)
99 3qqz_A Putative uncharacterize 99.0 1.4E-07 4.9E-12 93.5 24.0 178 3-195 41-243 (255)
100 2wg3_C Hedgehog-interacting pr 99.0 4.1E-08 1.4E-12 106.4 21.7 204 311-518 11-311 (463)
101 2iwa_A Glutamine cyclotransfer 98.9 1.6E-07 5.5E-12 93.7 23.9 162 357-528 22-190 (266)
102 1ajj_A LR5, low-density lipopr 98.9 3.9E-10 1.3E-14 76.0 3.3 35 592-626 1-35 (37)
103 1pby_B Quinohemoprotein amine 98.9 1.7E-06 5.8E-11 88.4 32.4 293 3-387 3-310 (337)
104 1jof_A Carboxy-CIS,CIS-muconat 98.9 7.3E-06 2.5E-10 85.8 37.3 292 1-387 3-341 (365)
105 2mad_H Methylamine dehydrogena 98.9 1.1E-05 3.8E-10 85.0 38.6 107 45-160 28-154 (373)
106 1cr8_A Protein (LOW density li 98.9 7.4E-10 2.5E-14 76.8 4.1 38 591-630 2-40 (42)
107 2gtl_N Extracellular hemoglobi 98.9 5.3E-10 1.8E-14 104.4 4.2 61 590-650 50-115 (220)
108 1j8e_A Low-density lipoprotein 98.9 2.6E-10 8.8E-15 80.0 1.5 40 591-630 3-42 (44)
109 3c75_H MADH, methylamine dehyd 98.9 7.9E-07 2.7E-11 95.1 29.1 275 97-436 82-403 (426)
110 2mad_H Methylamine dehydrogena 98.9 1.7E-05 5.9E-10 83.6 38.7 134 361-500 218-372 (373)
111 2jm4_A Relaxin receptor 1; LDL 98.9 8.3E-10 2.8E-14 77.0 3.5 37 590-626 4-41 (43)
112 3dpr_E LDL-receptor class A 3; 98.9 1.1E-09 3.6E-14 74.7 3.7 34 593-626 1-36 (39)
113 3a7q_B Low-density lipoprotein 98.9 8.4E-10 2.9E-14 77.4 3.2 37 590-626 5-41 (44)
114 2knx_A Prolow-density lipoprot 98.9 1.3E-09 4.3E-14 78.5 3.6 43 590-636 4-47 (50)
115 2oiz_A Aromatic amine dehydrog 98.8 6.1E-06 2.1E-10 86.6 32.5 216 314-538 51-355 (361)
116 2wg3_C Hedgehog-interacting pr 98.8 5.3E-07 1.8E-11 97.6 23.9 276 314-624 69-450 (463)
117 2oiz_A Aromatic amine dehydrog 98.8 1.7E-05 5.9E-10 83.1 35.0 91 319-414 259-360 (361)
118 1pby_B Quinohemoprotein amine 98.8 2.4E-06 8.2E-11 87.3 27.8 200 315-528 35-319 (337)
119 1k7b_A Subgroup A ROUS sarcoma 98.8 1.9E-09 6.4E-14 76.9 2.5 36 591-626 5-45 (47)
120 1qks_A Cytochrome CD1 nitrite 98.8 0.00018 6.2E-09 80.0 43.5 352 45-495 163-556 (567)
121 2i1p_A Low-density lipoprotein 98.8 2.1E-09 7.3E-14 76.9 2.0 39 591-631 5-44 (48)
122 2gtl_O Extracellular hemoglobi 98.7 2.4E-09 8.2E-14 101.2 2.7 49 592-642 54-104 (215)
123 3sjl_D Methylamine dehydrogena 98.7 8E-06 2.7E-10 85.9 29.4 301 43-412 38-384 (386)
124 1cru_A Protein (soluble quinop 98.7 3.1E-07 1.1E-11 99.5 18.9 156 311-469 24-249 (454)
125 1mda_H Methylamine dehydrogena 98.7 6.2E-06 2.1E-10 86.6 27.4 275 98-412 30-367 (368)
126 1jrf_A TVA LDL-A module, subgr 98.7 3.4E-09 1.2E-13 75.6 1.3 36 591-626 3-43 (47)
127 2gtl_M Hemoglobin linker chain 98.7 5.7E-09 1.9E-13 98.6 2.9 60 590-649 51-115 (217)
128 1kli_L Factor VIIA; extrinsic 98.7 5.9E-09 2E-13 80.9 2.0 45 236-280 4-50 (69)
129 3nol_A Glutamine cyclotransfer 98.6 1.5E-06 5E-11 85.9 19.1 182 280-477 54-255 (262)
130 1mda_H Methylamine dehydrogena 98.6 5.2E-06 1.8E-10 87.2 23.5 214 315-538 67-364 (368)
131 3mbr_X Glutamine cyclotransfer 98.6 3.8E-05 1.3E-09 75.1 27.8 188 315-517 22-233 (243)
132 2fcw_B LDL receptor, low-densi 98.6 1.3E-08 4.5E-13 81.4 2.3 51 573-629 27-78 (80)
133 1k32_A Tricorn protease; prote 98.6 0.0011 3.7E-08 79.5 45.9 408 11-508 33-492 (1045)
134 1kli_L Factor VIIA; extrinsic 98.6 1.5E-08 5.1E-13 78.5 2.2 41 548-588 5-46 (69)
135 3nol_A Glutamine cyclotransfer 98.6 2.5E-05 8.4E-10 77.1 25.6 186 316-516 45-253 (262)
136 2p9w_A MAL S 1 allergenic prot 98.5 2.5E-06 8.4E-11 87.0 18.2 158 36-199 11-208 (334)
137 3nok_A Glutaminyl cyclase; bet 98.5 3.5E-06 1.2E-10 83.2 18.5 158 358-529 57-220 (268)
138 3sre_A PON1, serum paraoxonase 98.5 5.8E-06 2E-10 86.0 21.3 177 9-196 81-288 (355)
139 3nok_A Glutaminyl cyclase; bet 98.5 4E-05 1.4E-09 75.6 25.8 186 316-516 57-263 (268)
140 3mbr_X Glutamine cyclotransfer 98.5 1E-05 3.5E-10 79.1 21.3 160 357-528 22-188 (243)
141 1fwx_A Nitrous oxide reductase 98.5 5.9E-06 2E-10 90.7 21.7 190 325-519 101-361 (595)
142 1jmx_B Amine dehydrogenase; ox 98.5 1.9E-05 6.4E-10 81.1 24.5 225 285-527 19-333 (349)
143 2ecf_A Dipeptidyl peptidase IV 98.5 0.00034 1.2E-08 80.2 36.6 363 37-484 36-465 (741)
144 1fwx_A Nitrous oxide reductase 98.5 6.6E-06 2.3E-10 90.3 20.7 301 48-458 100-455 (595)
145 2wph_E Coagulation factor IXA 98.5 5E-08 1.7E-12 73.1 2.7 38 551-588 2-40 (59)
146 2bz6_L Blood coagulation facto 98.5 4.1E-08 1.4E-12 72.0 1.9 38 551-588 2-40 (53)
147 1jmx_B Amine dehydrogenase; ox 98.5 5.7E-05 2E-09 77.4 26.4 149 325-480 10-177 (349)
148 2ece_A 462AA long hypothetical 98.4 4.6E-05 1.6E-09 80.9 24.4 202 313-520 137-428 (462)
149 2fyj_A Low-density lipoprotein 98.4 2.1E-07 7.2E-12 74.9 4.7 48 573-626 29-79 (82)
150 2wph_E Coagulation factor IXA 98.4 8E-08 2.7E-12 72.0 1.8 39 240-278 2-42 (59)
151 3ojy_B Complement component C8 98.4 1.5E-07 5.1E-12 103.4 4.6 71 568-648 42-115 (537)
152 2bz6_L Blood coagulation facto 98.4 7.1E-08 2.4E-12 70.7 1.4 41 240-280 2-44 (53)
153 2xrc_A Human complement factor 98.4 1.7E-07 6E-12 104.2 4.5 53 595-651 206-258 (565)
154 1k32_A Tricorn protease; prote 98.4 0.0046 1.6E-07 74.0 43.4 197 314-521 379-639 (1045)
155 1kig_L Factor XA; glycoprotein 98.3 8.4E-08 2.9E-12 69.7 1.0 40 240-279 1-41 (51)
156 2jkh_L Factor X light chain; p 98.3 1.1E-07 3.8E-12 70.3 1.6 42 238-279 2-44 (55)
157 2hqs_A Protein TOLB; TOLB, PAL 98.3 0.0003 1E-08 75.0 29.0 226 287-527 159-394 (415)
158 3amr_A 3-phytase; beta-propell 98.3 0.00017 5.7E-09 74.2 24.1 163 4-185 43-239 (355)
159 1kig_L Factor XA; glycoprotein 98.2 5.9E-07 2E-11 65.2 3.4 37 551-588 1-38 (51)
160 3ojy_A Complement component C8 98.2 1.1E-06 3.7E-11 96.6 5.7 75 569-649 41-118 (554)
161 3amr_A 3-phytase; beta-propell 98.2 0.00044 1.5E-08 71.0 24.1 177 336-518 50-262 (355)
162 2ece_A 462AA long hypothetical 98.1 5.4E-05 1.9E-09 80.4 17.3 145 319-465 193-399 (462)
163 3pe7_A Oligogalacturonate lyas 98.1 0.0069 2.4E-07 62.9 33.7 118 316-435 240-384 (388)
164 2jkh_L Factor X light chain; p 98.1 1.2E-06 4.2E-11 64.7 2.4 39 549-588 2-41 (55)
165 3no2_A Uncharacterized protein 98.1 0.00031 1.1E-08 70.5 21.0 173 2-196 6-185 (276)
166 2ojh_A Uncharacterized protein 98.0 0.00041 1.4E-08 68.6 21.1 199 314-521 42-260 (297)
167 3sfz_A APAF-1, apoptotic pepti 98.0 0.063 2.2E-06 65.1 50.2 432 37-527 615-1082(1249)
168 2ymu_A WD-40 repeat protein; u 98.0 0.031 1E-06 61.4 60.0 456 3-527 31-505 (577)
169 3q6k_A 43.2 kDa salivary prote 98.0 0.00073 2.5E-08 70.5 22.6 174 10-193 122-341 (381)
170 3pe7_A Oligogalacturonate lyas 98.0 0.0037 1.3E-07 65.0 28.6 181 336-518 168-383 (388)
171 3no2_A Uncharacterized protein 98.0 0.00081 2.8E-08 67.4 21.9 190 327-527 6-203 (276)
172 3q6k_A 43.2 kDa salivary prote 97.9 0.0005 1.7E-08 71.7 19.9 142 2-150 172-342 (381)
173 2hqs_A Protein TOLB; TOLB, PAL 97.9 0.0025 8.6E-08 67.7 25.6 181 336-522 159-347 (415)
174 3azo_A Aminopeptidase; POP fam 97.9 0.0021 7.1E-08 72.5 26.4 207 314-523 130-373 (662)
175 2ymu_A WD-40 repeat protein; u 97.9 0.05 1.7E-06 59.6 59.1 469 4-527 72-546 (577)
176 2z3z_A Dipeptidyl aminopeptida 97.9 0.0074 2.5E-07 68.5 30.3 317 38-437 82-437 (706)
177 2ojh_A Uncharacterized protein 97.9 0.00077 2.6E-08 66.6 19.5 196 280-485 55-265 (297)
178 2z3z_A Dipeptidyl aminopeptida 97.9 0.021 7.1E-07 64.8 33.7 352 41-480 29-437 (706)
179 2ecf_A Dipeptidyl peptidase IV 97.8 0.017 5.8E-07 65.9 32.7 141 357-505 288-442 (741)
180 1gxr_A ESG1, transducin-like e 97.8 0.035 1.2E-06 55.6 33.6 309 39-422 11-327 (337)
181 1xfd_A DIP, dipeptidyl aminope 97.7 0.01 3.6E-07 67.4 28.0 356 38-466 17-429 (723)
182 1apq_A Complement protease C1R 97.7 1.8E-05 6.1E-10 57.9 2.9 40 236-275 3-51 (53)
183 3c5m_A Oligogalacturonate lyas 97.7 0.033 1.1E-06 57.6 28.9 124 315-443 239-392 (396)
184 3sfz_A APAF-1, apoptotic pepti 97.5 0.35 1.2E-05 58.5 51.9 475 9-521 635-1160(1249)
185 2pm9_A Protein WEB1, protein t 97.5 0.013 4.4E-07 61.2 22.9 142 8-162 42-196 (416)
186 3mkq_A Coatomer beta'-subunit; 97.4 0.3 1E-05 55.9 48.3 359 38-479 14-387 (814)
187 3azo_A Aminopeptidase; POP fam 97.3 0.004 1.4E-07 70.2 17.6 197 323-521 88-327 (662)
188 1gxr_A ESG1, transducin-like e 97.3 0.17 5.8E-06 50.5 34.0 231 280-523 65-300 (337)
189 1xfd_A DIP, dipeptidyl aminope 97.3 0.18 6.1E-06 57.1 31.1 133 9-150 35-192 (723)
190 1pgu_A Actin interacting prote 97.3 0.33 1.1E-05 53.2 47.9 169 8-195 85-273 (615)
191 1apq_A Complement protease C1R 97.2 0.00018 6.2E-09 52.4 3.1 33 555-588 19-52 (53)
192 1r5m_A SIR4-interacting protei 97.2 0.26 8.8E-06 50.9 38.4 75 38-122 109-183 (425)
193 2xdw_A Prolyl endopeptidase; a 97.2 0.14 4.7E-06 58.2 28.7 210 315-527 126-376 (710)
194 1r5m_A SIR4-interacting protei 97.2 0.29 1E-05 50.5 40.2 334 84-478 46-425 (425)
195 4aez_A CDC20, WD repeat-contai 97.2 0.12 4.1E-06 53.9 25.8 176 4-195 189-370 (401)
196 3f1s_B Vitamin K-dependent pro 97.1 0.00013 4.4E-09 73.7 1.6 43 237-279 2-46 (283)
197 3o4h_A Acylamino-acid-releasin 97.1 0.028 9.5E-07 62.2 20.6 195 316-523 24-231 (582)
198 1pgu_A Actin interacting prote 97.0 0.59 2E-05 51.1 45.9 173 3-195 33-228 (615)
199 2aq5_A Coronin-1A; WD40 repeat 97.0 0.44 1.5E-05 49.4 31.1 203 313-522 81-302 (402)
200 4g56_B MGC81050 protein; prote 97.0 0.23 7.7E-06 51.1 25.3 103 315-421 228-331 (357)
201 3o4h_A Acylamino-acid-releasin 97.0 0.011 3.9E-07 65.4 16.3 186 316-512 67-269 (582)
202 2pm9_A Protein WEB1, protein t 97.0 0.059 2E-06 56.0 21.0 211 314-527 68-302 (416)
203 3f1s_B Vitamin K-dependent pro 96.9 0.00045 1.5E-08 69.7 3.9 40 548-588 2-43 (283)
204 4gqb_B Methylosome protein 50; 96.9 0.48 1.6E-05 48.5 27.2 195 313-512 127-324 (344)
205 3ow8_A WD repeat-containing pr 96.9 0.38 1.3E-05 48.5 25.9 173 5-195 138-311 (321)
206 3t5o_A Complement component C6 96.9 0.00053 1.8E-08 80.4 4.5 37 592-631 118-154 (913)
207 2w2n_E LDL receptor, low-densi 96.9 0.00028 9.4E-09 59.8 1.6 45 235-279 27-71 (107)
208 2xyi_A Probable histone-bindin 96.9 0.16 5.4E-06 53.7 23.5 203 314-519 129-353 (430)
209 3c5m_A Oligogalacturonate lyas 96.8 0.023 7.8E-07 58.8 16.5 181 336-521 168-386 (396)
210 3ei3_B DNA damage-binding prot 96.8 0.38 1.3E-05 49.4 25.6 203 314-525 74-288 (383)
211 3ow8_A WD repeat-containing pr 96.8 0.3 1E-05 49.3 24.3 175 3-195 94-269 (321)
212 2bkl_A Prolyl endopeptidase; m 96.8 0.32 1.1E-05 55.0 26.8 168 315-486 228-405 (695)
213 1aut_L Activated protein C; se 96.8 0.00054 1.8E-08 58.8 2.7 54 549-609 55-110 (114)
214 2vdu_B TRNA (guanine-N(7)-)-me 96.8 0.74 2.5E-05 48.6 36.2 69 92-162 107-179 (450)
215 3zwl_B Eukaryotic translation 96.7 0.57 2E-05 47.1 29.7 208 313-527 32-257 (369)
216 2gop_A Trilobed protease; beta 96.7 0.19 6.5E-06 50.8 22.2 182 316-516 17-250 (347)
217 4g56_B MGC81050 protein; prote 96.7 0.19 6.7E-06 51.6 22.4 197 314-516 140-340 (357)
218 2xdw_A Prolyl endopeptidase; a 96.7 0.23 7.7E-06 56.4 24.9 195 323-521 81-322 (710)
219 2xyi_A Probable histone-bindin 96.7 0.14 4.9E-06 54.0 21.6 196 315-513 183-404 (430)
220 3ei3_B DNA damage-binding prot 96.7 0.27 9.4E-06 50.5 23.3 178 4-195 89-272 (383)
221 3mkq_A Coatomer beta'-subunit; 96.7 1.3 4.5E-05 50.4 47.2 175 3-195 28-207 (814)
222 2w2n_E LDL receptor, low-densi 96.7 0.00057 1.9E-08 57.9 1.9 60 544-607 25-84 (107)
223 1k8k_C P40, ARP2/3 complex 41 96.6 0.76 2.6E-05 46.5 26.1 204 316-528 11-242 (372)
224 2aq5_A Coronin-1A; WD40 repeat 96.6 0.39 1.3E-05 49.9 23.7 183 4-202 97-295 (402)
225 1aut_L Activated protein C; se 96.5 0.00086 2.9E-08 57.5 2.3 41 237-277 54-95 (114)
226 2vdu_B TRNA (guanine-N(7)-)-me 96.5 1 3.5E-05 47.5 31.8 199 314-521 150-395 (450)
227 1sq9_A Antiviral protein SKI8; 96.5 0.88 3E-05 46.6 27.9 165 314-486 122-330 (397)
228 4a5s_A Dipeptidyl peptidase 4 96.5 0.45 1.5E-05 54.3 25.6 115 405-520 263-401 (740)
229 3iuj_A Prolyl endopeptidase; h 96.5 0.69 2.3E-05 52.3 26.9 197 315-518 130-358 (693)
230 4a9v_A PHOX; hydrolase, beta-p 96.4 0.025 8.7E-07 61.5 13.3 105 83-192 383-548 (592)
231 4ery_A WD repeat-containing pr 96.4 0.87 3E-05 45.1 25.2 170 8-195 42-213 (312)
232 2gop_A Trilobed protease; beta 96.4 0.34 1.2E-05 48.9 21.4 188 316-522 61-294 (347)
233 1k8k_C P40, ARP2/3 complex 41 96.3 0.52 1.8E-05 47.7 22.6 173 5-195 24-223 (372)
234 1szb_A Mannose binding lectin- 96.2 0.0016 5.3E-08 60.2 2.3 41 236-276 123-167 (170)
235 4a11_B DNA excision repair pro 96.2 0.79 2.7E-05 46.9 23.2 200 314-521 44-278 (408)
236 2xe4_A Oligopeptidase B; hydro 96.2 0.63 2.2E-05 53.2 24.2 199 315-517 175-398 (751)
237 4gqb_B Methylosome protein 50; 96.2 0.41 1.4E-05 49.0 20.6 169 6-188 98-271 (344)
238 4aez_A CDC20, WD repeat-contai 96.2 1.5 5.1E-05 45.4 34.3 227 280-521 106-338 (401)
239 3hxj_A Pyrrolo-quinoline quino 96.1 0.21 7.2E-06 50.0 17.9 166 3-196 110-275 (330)
240 3hxj_A Pyrrolo-quinoline quino 96.1 1 3.6E-05 44.7 23.1 181 325-524 107-288 (330)
241 1yr2_A Prolyl oligopeptidase; 96.1 1.4 4.9E-05 50.0 26.5 197 315-517 164-393 (741)
242 1yr2_A Prolyl oligopeptidase; 96.0 0.65 2.2E-05 52.9 23.4 193 323-520 116-351 (741)
243 1yfq_A Cell cycle arrest prote 96.0 1 3.5E-05 44.9 22.3 200 314-523 57-286 (342)
244 4a9v_A PHOX; hydrolase, beta-p 95.9 0.06 2E-06 58.6 13.1 111 36-151 382-551 (592)
245 2xrc_A Human complement factor 95.9 0.0052 1.8E-07 68.1 5.0 48 573-630 228-276 (565)
246 3vl1_A 26S proteasome regulato 95.9 0.86 3E-05 47.1 22.0 173 5-195 113-312 (420)
247 3jrp_A Fusion protein of prote 95.8 1.4 4.9E-05 44.4 23.0 179 4-195 72-277 (379)
248 4e54_B DNA damage-binding prot 95.8 0.17 5.8E-06 53.5 16.2 175 8-195 139-317 (435)
249 1sq9_A Antiviral protein SKI8; 95.8 2 6.8E-05 43.8 30.1 208 314-527 63-330 (397)
250 2m0p_A Low-density lipoprotein 95.8 0.0045 1.5E-07 44.3 2.4 20 632-651 5-24 (52)
251 3zwl_B Eukaryotic translation 95.7 1.9 6.5E-05 43.2 42.1 103 37-149 32-134 (369)
252 3jrp_A Fusion protein of prote 95.7 1.5 5.2E-05 44.2 22.5 175 8-195 30-230 (379)
253 4a5s_A Dipeptidyl peptidase 4 95.7 3.9 0.00013 46.4 32.1 164 316-485 262-456 (740)
254 2bkl_A Prolyl endopeptidase; m 95.7 0.51 1.7E-05 53.3 20.4 194 324-521 78-306 (695)
255 3i2n_A WD repeat-containing pr 95.7 2 6.8E-05 42.9 27.0 119 38-164 19-149 (357)
256 4a11_B DNA excision repair pro 95.6 2.3 7.8E-05 43.3 29.0 151 36-195 98-266 (408)
257 1got_B GT-beta; complex (GTP-b 95.5 2.3 8E-05 42.8 25.2 174 5-196 158-334 (340)
258 4e54_B DNA damage-binding prot 95.5 0.46 1.6E-05 50.1 18.3 204 314-525 120-333 (435)
259 1x7a_L Coagulation factor IX, 95.5 0.0034 1.2E-07 56.3 1.1 42 236-277 84-127 (146)
260 4ery_A WD repeat-containing pr 95.5 2.2 7.4E-05 42.1 37.4 149 37-196 23-171 (312)
261 3vl1_A 26S proteasome regulato 95.5 2.7 9.2E-05 43.3 33.7 326 38-414 57-398 (420)
262 1yo8_A Thrombospondin-2; EGF, 95.4 0.018 6.2E-07 63.7 6.8 59 548-608 44-121 (634)
263 1nzi_A Complement C1S componen 95.4 0.0058 2E-07 55.5 2.3 41 236-276 116-158 (159)
264 2c4f_L Coagulation factor VII 95.4 0.0086 3E-07 53.3 3.4 38 551-588 91-129 (142)
265 1nfu_B Coagulation factor XA, 95.4 0.0039 1.3E-07 58.6 1.0 40 238-277 82-122 (195)
266 1szb_A Mannose binding lectin- 95.3 0.0077 2.6E-07 55.4 3.0 39 549-588 125-167 (170)
267 3k26_A Polycomb protein EED; W 95.3 2.7 9.2E-05 42.0 22.5 114 314-434 70-191 (366)
268 2vh0_B Activated factor XA lig 95.3 0.0044 1.5E-07 54.7 1.0 39 238-276 82-121 (134)
269 2c4f_L Coagulation factor VII 95.3 0.0063 2.2E-07 54.2 2.0 37 240-276 91-129 (142)
270 1lmj_A Fibrillin 1; EGF, calci 95.2 0.0064 2.2E-07 49.0 1.7 58 549-608 4-64 (86)
271 1lmj_A Fibrillin 1; EGF, calci 95.2 0.0034 1.1E-07 50.7 -0.0 41 235-275 44-86 (86)
272 3iuj_A Prolyl endopeptidase; h 95.1 2.8 9.7E-05 47.2 24.2 196 319-521 180-407 (693)
273 2pbi_B Guanine nucleotide-bind 95.1 3.3 0.00011 42.0 23.7 174 5-195 170-347 (354)
274 2ynn_A Coatomer subunit beta'; 95.1 2.9 9.8E-05 41.3 34.5 147 38-195 14-162 (304)
275 1z68_A Fibroblast activation p 95.1 5.6 0.00019 44.6 28.3 141 40-195 18-189 (719)
276 1z6c_A Vitamin K-dependent pro 95.0 0.0076 2.6E-07 48.7 1.7 42 236-277 2-45 (87)
277 3frx_A Guanine nucleotide-bind 95.0 3.1 0.00011 41.4 23.2 174 4-196 122-308 (319)
278 3k26_A Polycomb protein EED; W 95.0 3.2 0.00011 41.4 28.1 145 6-162 39-191 (366)
279 1d2l_A Lipoprotein receptor re 95.0 0.0068 2.3E-07 42.2 1.2 20 632-651 4-23 (45)
280 2gtl_O Extracellular hemoglobi 95.0 0.0016 5.6E-08 61.4 -2.7 35 613-651 38-74 (215)
281 1vyh_C Platelet-activating fac 95.0 4.1 0.00014 42.3 25.3 175 4-195 207-401 (410)
282 1x7a_L Coagulation factor IX, 94.9 0.015 5E-07 52.1 3.4 39 549-588 86-126 (146)
283 1ajj_A LR5, low-density lipopr 94.9 0.0094 3.2E-07 39.5 1.5 19 633-651 1-19 (37)
284 1j8e_A Low-density lipoprotein 94.9 0.011 3.7E-07 40.9 1.9 20 632-651 3-22 (44)
285 3fm0_A Protein CIAO1; WDR39,SG 94.8 3.8 0.00013 41.3 22.3 176 5-195 32-215 (345)
286 1z6c_A Vitamin K-dependent pro 94.7 0.018 6.3E-07 46.4 3.2 54 549-607 4-59 (87)
287 4a2l_A BT_4663, two-component 94.7 7.8 0.00027 44.2 45.6 398 40-520 175-615 (795)
288 3a7q_B Low-density lipoprotein 94.5 0.012 4.2E-07 40.6 1.4 20 632-651 6-25 (44)
289 1vyh_C Platelet-activating fac 94.4 5.5 0.00019 41.3 27.3 204 314-527 109-335 (410)
290 2vh0_B Activated factor XA lig 94.2 0.017 5.8E-07 50.8 2.1 39 549-588 82-121 (134)
291 1yfq_A Cell cycle arrest prote 94.2 4.8 0.00016 39.8 22.8 189 314-516 12-222 (342)
292 1nfu_B Coagulation factor XA, 94.2 0.016 5.4E-07 54.4 2.0 39 549-588 82-121 (195)
293 1z68_A Fibroblast activation p 94.2 0.99 3.4E-05 50.9 17.5 199 316-520 112-394 (719)
294 2xe4_A Oligopeptidase B; hydro 94.1 3.9 0.00013 46.5 22.4 191 324-519 125-354 (751)
295 2kl7_A Fibulin-4; secreted, ca 94.1 0.026 9E-07 43.5 2.7 27 236-262 2-30 (71)
296 3dwl_C Actin-related protein 2 94.1 0.68 2.3E-05 47.2 14.5 177 4-195 26-226 (377)
297 2w86_A Fibrillin-1, fibrillin1 94.1 0.01 3.6E-07 53.1 0.5 41 235-275 105-147 (147)
298 1uzk_A Fibrillin-1; glycoprote 94.0 0.01 3.5E-07 54.1 0.3 41 235-275 120-162 (162)
299 2jm4_A Relaxin receptor 1; LDL 94.0 0.019 6.6E-07 39.4 1.6 21 631-651 4-25 (43)
300 1nzi_A Complement C1S componen 93.8 0.029 1E-06 50.8 2.9 39 549-588 118-158 (159)
301 1erj_A Transcriptional repress 93.8 6.8 0.00023 40.2 24.2 146 39-195 125-277 (393)
302 1emn_A Fibrillin; extracellula 93.8 0.034 1.2E-06 44.2 2.9 55 549-608 6-61 (82)
303 1emn_A Fibrillin; extracellula 93.8 0.025 8.6E-07 45.0 2.1 39 236-276 4-43 (82)
304 1got_B GT-beta; complex (GTP-b 93.7 6.3 0.00022 39.5 24.5 173 4-195 70-247 (340)
305 2i1p_A Low-density lipoprotein 93.7 0.028 9.5E-07 39.7 1.9 22 629-651 3-25 (48)
306 3dm0_A Maltose-binding peripla 93.7 5.7 0.0002 44.4 22.4 176 3-195 397-582 (694)
307 1erj_A Transcriptional repress 93.6 7.3 0.00025 39.9 29.1 203 316-527 126-349 (393)
308 2oaj_A Protein SNI1; WD40 repe 93.6 9.1 0.00031 44.5 24.4 198 314-522 18-245 (902)
309 3iz6_a 40S ribosomal protein R 93.6 7.4 0.00025 39.7 24.1 179 4-195 173-365 (380)
310 2knx_A Prolow-density lipoprot 93.4 0.034 1.2E-06 39.5 2.0 21 631-651 4-25 (50)
311 2ynn_A Coatomer subunit beta'; 93.4 6.4 0.00022 38.7 28.8 206 314-527 14-225 (304)
312 3jro_A Fusion protein of prote 93.1 3.8 0.00013 46.6 20.0 175 8-195 28-228 (753)
313 3dm0_A Maltose-binding peripla 93.1 13 0.00046 41.4 24.5 203 313-522 382-595 (694)
314 3odt_A Protein DOA1; ubiquitin 93.1 6.8 0.00023 37.9 26.9 201 314-527 19-222 (313)
315 3jro_A Fusion protein of prote 93.0 2.7 9.2E-05 47.9 18.4 178 5-195 71-275 (753)
316 3dpr_E LDL-receptor class A 3; 92.7 0.038 1.3E-06 37.0 1.3 18 634-651 1-20 (39)
317 1cr8_A Protein (LOW density li 92.6 0.043 1.5E-06 37.4 1.6 20 632-651 2-22 (42)
318 1k7b_A Subgroup A ROUS sarcoma 92.4 0.042 1.4E-06 38.5 1.3 20 632-651 5-29 (47)
319 1gl4_A Nidogen-1, entactin; im 92.3 0.031 1.1E-06 55.1 0.7 41 236-277 4-46 (285)
320 1z1y_A Ookinete surface protei 92.2 0.025 8.7E-07 52.7 -0.0 54 547-608 9-65 (186)
321 3dwl_C Actin-related protein 2 92.2 0.99 3.4E-05 45.9 12.2 163 9-189 75-266 (377)
322 2xzm_R RACK1; ribosome, transl 92.1 10 0.00036 37.8 22.2 165 4-186 91-267 (343)
323 1tl2_A L10, protein (tachylect 92.0 0.68 2.3E-05 44.0 9.5 106 37-159 40-159 (236)
324 2kny_A LRP-1, linker, APO-E; l 91.9 0.044 1.5E-06 43.3 1.0 24 628-651 3-27 (80)
325 1yo8_A Thrombospondin-2; EGF, 91.7 0.1 3.6E-06 57.7 4.1 50 545-601 5-55 (634)
326 3h5c_B Vitamin K-dependent pro 91.6 0.088 3E-06 53.5 3.2 44 236-279 42-87 (317)
327 1kb0_A Quinohemoprotein alcoho 91.5 21 0.00071 39.9 25.1 58 469-528 457-516 (677)
328 3v9f_A Two-component system se 91.2 24 0.00081 40.0 47.9 433 10-520 136-612 (781)
329 1dx5_I Thrombomodulin; serine 91.1 0.047 1.6E-06 46.8 0.4 38 236-274 79-118 (118)
330 1tl2_A L10, protein (tachylect 91.1 11 0.00037 35.9 19.2 149 354-516 39-207 (236)
331 3dw8_B Serine/threonine-protei 90.5 15 0.00051 37.8 19.6 198 314-519 29-315 (447)
332 4h5i_A Guanine nucleotide-exch 90.3 17 0.00057 36.8 23.1 182 3-202 148-339 (365)
333 2w86_A Fibrillin-1, fibrillin1 90.3 0.058 2E-06 48.1 0.3 37 236-274 3-41 (147)
334 1jrf_A TVA LDL-A module, subgr 90.1 0.09 3.1E-06 36.8 1.1 20 632-651 3-27 (47)
335 1uzk_A Fibrillin-1; glycoprote 90.0 0.058 2E-06 49.0 0.0 40 236-276 2-43 (162)
336 3frx_A Guanine nucleotide-bind 89.5 17 0.00059 35.8 26.2 204 314-526 18-234 (319)
337 3iz6_a 40S ribosomal protein R 89.3 20 0.00069 36.3 20.2 208 314-527 67-288 (380)
338 2xzm_R RACK1; ribosome, transl 89.2 19 0.00064 35.8 22.4 173 4-195 42-234 (343)
339 4a2l_A BT_4663, two-component 89.2 34 0.0012 38.8 44.1 430 3-520 101-572 (795)
340 1edm_B Factor IX; epidermal gr 89.1 0.27 9.2E-06 32.6 2.9 34 237-275 3-38 (39)
341 3lrv_A PRE-mRNA-splicing facto 89.0 19 0.00066 35.7 21.1 143 4-162 142-291 (343)
342 2pbi_B Guanine nucleotide-bind 88.7 21 0.00073 35.8 25.2 148 38-195 155-305 (354)
343 2vj3_A Neurogenic locus notch 88.6 0.47 1.6E-05 41.4 4.9 31 549-580 6-38 (135)
344 3zwu_A Alkaline phosphatase PH 88.5 3.2 0.00011 45.6 12.6 110 311-422 381-551 (592)
345 2kl7_A Fibulin-4; secreted, ca 88.4 0.35 1.2E-05 37.1 3.5 34 549-583 4-40 (71)
346 1nr0_A Actin interacting prote 88.4 32 0.0011 37.5 49.3 424 9-519 79-522 (611)
347 2oaj_A Protein SNI1; WD40 repe 88.4 31 0.0011 39.9 21.8 167 8-195 36-232 (902)
348 1edm_B Factor IX; epidermal gr 88.3 0.28 9.6E-06 32.5 2.5 31 544-580 4-34 (39)
349 2ad6_A Methanol dehydrogenase 88.0 34 0.0012 37.3 27.7 76 450-528 389-503 (571)
350 3f3f_A Nucleoporin SEH1; struc 88.0 20 0.0007 34.7 24.5 162 313-478 57-249 (351)
351 1nr0_A Actin interacting prote 87.8 35 0.0012 37.2 49.2 409 4-498 163-590 (611)
352 1egf_A Epidermal growth factor 87.6 0.29 9.9E-06 35.1 2.3 23 250-275 19-43 (53)
353 3lrv_A PRE-mRNA-splicing facto 87.4 24 0.00083 35.0 22.2 146 38-194 126-280 (343)
354 3fm0_A Protein CIAO1; WDR39,SG 87.3 25 0.00085 35.0 22.6 141 9-162 81-226 (345)
355 2bou_A EGF-like module contain 87.1 0.17 6E-06 44.7 1.1 42 236-277 95-139 (143)
356 3h5c_B Vitamin K-dependent pro 86.9 0.39 1.3E-05 48.6 3.8 39 549-588 44-84 (317)
357 3zwu_A Alkaline phosphatase PH 86.6 5.2 0.00018 43.9 12.8 109 36-149 382-549 (592)
358 3i2n_A WD repeat-containing pr 86.5 26 0.00089 34.4 36.1 117 315-434 166-290 (357)
359 4h5i_A Guanine nucleotide-exch 86.2 30 0.001 34.8 23.2 195 316-516 136-340 (365)
360 3mmy_A MRNA export factor; mRN 85.3 30 0.001 34.0 32.3 117 37-164 39-161 (368)
361 1a3p_A Epidermal growth factor 85.0 0.75 2.6E-05 31.5 3.3 27 550-580 10-36 (45)
362 1dx5_I Thrombomodulin; serine 84.9 0.33 1.1E-05 41.4 1.7 22 557-580 50-71 (118)
363 3u7u_G Neuregulin 1; signaling 84.6 0.55 1.9E-05 34.0 2.5 40 544-588 9-49 (55)
364 3u7u_G Neuregulin 1; signaling 84.5 0.53 1.8E-05 34.0 2.4 36 236-275 12-48 (55)
365 1p22_A F-BOX/WD-repeat protein 84.3 40 0.0014 34.6 28.5 194 315-527 135-333 (435)
366 1k36_A Epiregulin; EGF-like fo 84.2 0.65 2.2E-05 32.2 2.6 23 250-275 18-42 (46)
367 3mmy_A MRNA export factor; mRN 84.1 34 0.0011 33.6 25.8 155 313-479 39-200 (368)
368 3odt_A Protein DOA1; ubiquitin 84.0 31 0.001 33.0 35.5 189 316-519 107-296 (313)
369 2oit_A Nucleoporin 214KDA; NH2 84.0 19 0.00066 37.6 15.6 124 357-484 94-229 (434)
370 1z1y_A Ookinete surface protei 83.6 0.37 1.3E-05 44.6 1.7 60 544-608 92-156 (186)
371 4aow_A Guanine nucleotide-bind 83.3 35 0.0012 33.2 27.0 206 314-526 39-253 (340)
372 2ovr_B FBW7, F-BOX/WD repeat p 83.1 45 0.0015 34.3 38.8 135 4-162 132-267 (445)
373 1p22_A F-BOX/WD-repeat protein 82.6 47 0.0016 34.1 29.5 190 314-518 174-364 (435)
374 3gre_A Serine/threonine-protei 82.6 46 0.0016 34.0 22.2 209 314-528 112-368 (437)
375 4aow_A Guanine nucleotide-bind 82.5 37 0.0013 32.9 26.0 198 314-520 87-287 (340)
376 2k2s_B Micronemal protein 6; m 82.4 0.31 1.1E-05 36.1 0.4 32 544-579 12-43 (61)
377 2bou_A EGF-like module contain 82.1 0.42 1.4E-05 42.1 1.3 28 560-588 110-138 (143)
378 1a3p_A Epidermal growth factor 81.6 0.68 2.3E-05 31.8 1.9 23 250-275 16-40 (45)
379 1kv9_A Type II quinohemoprotei 81.1 73 0.0025 35.3 24.3 78 450-528 384-497 (668)
380 2pm7_B Protein transport prote 80.7 42 0.0015 32.4 21.1 176 4-195 70-275 (297)
381 1k36_A Epiregulin; EGF-like fo 80.7 0.6 2E-05 32.3 1.4 27 549-580 12-38 (46)
382 3f3f_A Nucleoporin SEH1; struc 80.2 43 0.0015 32.2 27.7 202 314-520 12-250 (351)
383 3b7f_A Glycosyl hydrolase, BNR 79.4 24 0.00081 36.2 14.1 142 12-164 82-263 (394)
384 1egf_A Epidermal growth factor 79.3 1.2 4.1E-05 31.7 2.7 31 549-588 12-44 (53)
385 2gtl_M Hemoglobin linker chain 78.8 0.8 2.7E-05 43.1 2.0 23 629-651 49-73 (217)
386 3bg1_A Protein SEC13 homolog; 78.6 52 0.0018 32.1 15.9 177 5-195 75-283 (316)
387 3q7m_A Lipoprotein YFGL, BAMB; 78.5 57 0.002 32.6 20.8 129 49-197 239-370 (376)
388 3v9f_A Two-component system se 78.5 93 0.0032 35.0 50.2 446 3-521 80-570 (781)
389 2k2s_B Micronemal protein 6; m 77.6 0.46 1.6E-05 35.2 -0.0 24 250-275 26-49 (61)
390 2j04_B YDR362CP, TAU91; beta p 77.4 71 0.0024 34.2 17.6 146 38-195 267-418 (524)
391 4d90_A EGF-like repeat and dis 77.4 2.2 7.4E-05 37.3 4.4 30 546-580 3-33 (143)
392 2vj3_A Neurogenic locus notch 77.1 1.3 4.4E-05 38.5 2.8 72 560-643 57-133 (135)
393 3gre_A Serine/threonine-protei 77.0 68 0.0023 32.7 25.0 210 314-528 64-301 (437)
394 2oit_A Nucleoporin 214KDA; NH2 76.5 21 0.00074 37.2 12.8 117 39-164 94-224 (434)
395 3dw8_B Serine/threonine-protei 76.4 70 0.0024 32.5 31.7 69 315-387 287-373 (447)
396 1hae_A Heregulin-alpha; growth 76.4 1.3 4.4E-05 32.8 2.2 40 545-588 8-47 (63)
397 2ygq_A WIF-1, WNT inhibitory f 75.9 2.7 9.3E-05 42.5 5.2 11 570-580 165-175 (324)
398 2hes_X YDR267CP; beta-propelle 75.7 64 0.0022 31.7 23.4 134 3-149 26-172 (330)
399 1hae_A Heregulin-alpha; growth 75.0 1.3 4.4E-05 32.9 1.8 35 237-275 11-46 (63)
400 1sqj_A OXG-RCBH, oligoxylogluc 74.5 70 0.0024 36.3 17.3 175 10-192 36-247 (789)
401 2gtl_N Extracellular hemoglobi 73.0 1.5 5.1E-05 41.0 2.1 22 630-651 49-72 (220)
402 1nt0_A MAsp2, mannose-binding 72.9 1.3 4.5E-05 44.0 1.9 38 238-275 121-162 (286)
403 3dem_A Complement factor MAsp- 72.1 1.6 5.5E-05 43.1 2.3 38 238-275 122-163 (278)
404 3v7d_B Cell division control p 71.1 97 0.0033 31.7 38.6 100 4-119 135-236 (464)
405 1tpg_A T-plasminogen activator 70.2 2.9 9.9E-05 33.5 3.1 51 562-624 25-81 (91)
406 3ssb_I IMPI alpha, inducible m 69.6 2.1 7.2E-05 27.0 1.6 23 571-594 6-28 (32)
407 3v7d_B Cell division control p 67.9 1.1E+02 0.0039 31.2 32.4 202 313-522 162-384 (464)
408 2ovr_B FBW7, F-BOX/WD repeat p 66.4 1.2E+02 0.0041 30.9 40.3 136 41-195 123-258 (445)
409 2pm7_B Protein transport prote 65.9 96 0.0033 29.7 24.0 160 314-478 10-189 (297)
410 1nql_B Epidermal growth factor 65.6 1.8 6.3E-05 30.8 0.9 18 255-275 26-43 (53)
411 3ojy_A Complement component C8 64.8 3.7 0.00013 44.8 3.4 18 633-651 65-83 (554)
412 4gq1_A NUP37; propeller, trans 63.4 1.3E+02 0.0044 30.3 22.0 60 3-71 158-218 (393)
413 3dem_A Complement factor MAsp- 62.0 3.6 0.00012 40.5 2.5 32 556-588 132-164 (278)
414 3fcs_B Integrin beta-3; beta p 61.5 4.5 0.00015 45.3 3.4 35 570-607 545-583 (690)
415 2cn3_A Xyloglucanase, beta-1,4 61.1 1.7E+02 0.0059 32.7 16.7 147 10-165 44-233 (737)
416 3ojy_B Complement component C8 60.5 4.3 0.00015 44.1 3.0 15 637-651 69-84 (537)
417 3ca7_A Protein spitz; argos, E 60.2 2.7 9.3E-05 29.7 0.9 31 548-580 13-43 (52)
418 3vu4_A KMHSV2; beta-propeller 60.2 1.4E+02 0.0047 29.6 19.6 101 3-119 150-271 (355)
419 1nt0_A MAsp2, mannose-binding 60.0 4 0.00014 40.4 2.4 30 557-587 132-162 (286)
420 3fcs_B Integrin beta-3; beta p 60.0 18 0.00061 40.5 7.9 30 545-580 436-468 (690)
421 1gl4_A Nidogen-1, entactin; im 59.9 1.5 5.2E-05 43.1 -0.7 39 548-588 5-45 (285)
422 2nx7_A Nematocyst outer WALL a 59.8 1.2 4.2E-05 25.6 -0.8 18 548-565 2-19 (28)
423 1tpg_A T-plasminogen activator 59.7 4.5 0.00015 32.3 2.3 23 250-275 61-85 (91)
424 2j04_A TAU60, YPL007P, hypothe 59.7 1.7E+02 0.0059 31.7 15.5 122 9-148 149-284 (588)
425 3nt1_A Prostaglandin-endoperox 57.2 4.4 0.00015 44.4 2.4 37 544-588 2-39 (587)
426 1yiq_A Quinohemoprotein alcoho 57.1 2.3E+02 0.008 31.3 23.6 57 469-527 455-513 (689)
427 3ott_A Two-component system se 57.1 2.4E+02 0.0082 31.4 19.7 174 3-194 386-576 (758)
428 1ata_A Ascaris trypsin inhibit 56.9 9.4 0.00032 28.1 3.4 37 551-593 22-60 (62)
429 2ad6_A Methanol dehydrogenase 56.9 2.1E+02 0.0073 30.8 22.9 17 405-421 389-405 (571)
430 4d90_A EGF-like repeat and dis 55.0 5.7 0.00019 34.5 2.3 30 236-267 96-127 (143)
431 1n1i_A Merozoite surface prote 53.7 6 0.0002 32.3 2.0 39 237-275 50-94 (105)
432 2j04_A TAU60, YPL007P, hypothe 52.8 2.5E+02 0.0087 30.4 19.6 159 3-182 100-273 (588)
433 3q7m_A Lipoprotein YFGL, BAMB; 52.6 1.8E+02 0.0063 28.7 26.4 106 413-527 239-345 (376)
434 2gy5_A Angiopoietin-1 receptor 52.2 9.7 0.00033 40.0 4.0 12 569-580 215-226 (423)
435 4gga_A P55CDC, cell division c 52.1 2E+02 0.0068 29.0 28.4 195 314-513 190-389 (420)
436 1ccv_A AMCI, chymotrypsin inhi 52.0 5.5 0.00019 28.6 1.4 26 557-588 27-52 (56)
437 1q4g_A Prostaglandin G/H synth 51.6 5.1 0.00017 43.7 1.7 37 544-588 3-40 (553)
438 4ggc_A P55CDC, cell division c 51.5 1.6E+02 0.0055 27.8 24.4 180 3-196 121-306 (318)
439 1ob1_C Major merozoite surface 51.1 8.2 0.00028 31.3 2.4 29 238-266 47-82 (99)
440 3bg1_A Protein SEC13 homolog; 50.0 1.8E+02 0.0063 27.9 16.5 103 4-120 28-137 (316)
441 2hes_X YDR267CP; beta-propelle 49.2 1.9E+02 0.0066 28.0 25.5 159 313-477 58-229 (330)
442 3nt1_A Prostaglandin-endoperox 48.4 4.9 0.00017 44.0 1.0 24 250-276 14-39 (587)
443 3a0f_A Xyloglucanase; beta-pro 48.3 3.3E+02 0.011 30.5 18.0 152 10-167 42-217 (763)
444 3vu4_A KMHSV2; beta-propeller 46.1 2.3E+02 0.0078 27.9 25.7 192 315-527 21-235 (355)
445 1q4g_A Prostaglandin G/H synth 45.0 6.1 0.00021 43.0 1.0 23 250-275 15-39 (553)
446 1n1i_A Merozoite surface prote 44.9 8.6 0.0003 31.4 1.6 30 549-578 51-83 (105)
447 1kb0_A Quinohemoprotein alcoho 44.7 3.5E+02 0.012 29.7 25.6 64 2-73 130-202 (677)
448 1g1s_A P-selectin; selectin, l 43.3 11 0.00038 33.3 2.4 23 250-275 132-154 (162)
449 2ygq_A WIF-1, WNT inhibitory f 43.1 18 0.00062 36.3 4.2 11 570-580 197-207 (324)
450 1e0f_I Haemadin, factor IIA; c 42.6 14 0.00048 24.9 2.1 6 641-646 32-37 (57)
451 2cn3_A Xyloglucanase, beta-1,4 41.8 4E+02 0.014 29.6 20.1 196 315-517 24-281 (737)
452 3a0f_A Xyloglucanase; beta-pro 41.8 2.3E+02 0.0077 31.9 13.6 151 38-197 21-204 (763)
453 1flg_A Protein (quinoprotein e 41.7 3.6E+02 0.012 29.0 22.4 76 451-527 416-524 (582)
454 3b7f_A Glycosyl hydrolase, BNR 40.5 2.9E+02 0.01 27.6 17.2 172 316-497 179-390 (394)
455 3ltf_D Protein spitz; receptor 39.1 5.7 0.00019 28.8 -0.3 33 239-275 15-47 (58)
456 1hx2_A BSTI; beta-sheet disulf 38.8 23 0.00079 25.6 3.1 26 557-588 29-56 (60)
457 3asi_A Neurexin-1-alpha; beta- 37.0 27 0.00094 36.2 4.6 33 250-285 198-231 (410)
458 2zuy_A YESX protein; beta-prop 36.7 4.2E+02 0.014 28.8 13.5 118 65-194 275-412 (620)
459 1w6s_A Methanol dehydrogenase 34.7 4.7E+02 0.016 28.3 27.5 32 495-527 480-511 (599)
460 2p3f_N Anti-coagulant protein 34.5 18 0.00061 27.9 1.9 24 570-594 47-71 (78)
461 1ob1_C Major merozoite surface 34.4 15 0.0005 29.8 1.4 31 549-579 47-83 (99)
462 3k6s_B Integrin beta-2; cell r 33.9 26 0.0009 39.1 3.9 63 571-647 539-607 (687)
463 2zux_A YESW protein; beta-prop 33.7 4.3E+02 0.015 28.5 13.0 117 66-193 272-407 (591)
464 3zyj_B Netrin-G1; cell adhesio 32.8 16 0.00056 38.0 1.9 27 561-588 305-331 (426)
465 1xdt_R Hbegf, heparin-binding 32.4 19 0.00064 27.9 1.7 36 237-275 37-76 (79)
466 1sqj_A OXG-RCBH, oligoxylogluc 31.8 5.9E+02 0.02 28.5 21.3 160 314-479 15-202 (789)
467 4gga_A P55CDC, cell division c 31.4 4.1E+02 0.014 26.5 34.3 235 279-527 117-361 (420)
468 1iox_A Betacellulin; EGF-like 31.1 28 0.00096 24.2 2.3 28 548-580 13-40 (50)
469 3e50_C Protransforming growth 28.2 30 0.001 24.2 2.0 16 257-275 29-44 (50)
470 3qcw_A Neurexin-1-alpha; synap 28.1 6.7E+02 0.023 29.9 15.2 41 250-293 1030-1071(1245)
471 1g1s_A P-selectin; selectin, l 28.0 20 0.00067 31.6 1.4 35 545-588 121-155 (162)
472 3t5o_A Complement component C6 26.7 31 0.0011 40.0 3.1 15 637-651 121-135 (913)
473 2h9e_C Anti-coagulant protein 26.0 14 0.00048 29.0 -0.0 18 571-588 49-66 (84)
474 2rnl_A Amphiregulin; AR, color 25.5 38 0.0013 23.6 2.1 36 237-275 9-48 (50)
475 4hvt_A Ritya.17583.B, post-pro 25.4 7.2E+02 0.025 27.5 16.6 142 48-200 298-463 (711)
476 1eai_C Protein (chymotrypsin/e 24.2 44 0.0015 24.3 2.4 22 571-593 37-60 (61)
477 1b9w_A Protein (merozoite surf 22.8 35 0.0012 27.1 1.7 31 548-578 46-78 (95)
478 2ygo_A WIF-1, WNT inhibitory f 22.7 26 0.00089 32.0 1.0 28 246-276 150-180 (188)
No 1
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=1.5e-99 Score=859.25 Aligned_cols=563 Identities=28% Similarity=0.523 Sum_probs=492.1
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
|++++ ....|+++++++......++. ..++.|.+||||+.+++|||+| ...++|+|++++|+..++++..+
T Consensus 8 ~Ll~s--~~~~I~~i~l~~~~~~~~~~~-----~~~~~~~~l~~d~~~~~lywtD--~~~~~I~r~~~~g~~~~~v~~~g 78 (628)
T 4a0p_A 8 FLLFS--RRADIRRISLETNNNNVAIPL-----TGVKEASALDFDVTDNRIYWTD--ISLKTISRAFMNGSALEHVVEFG 78 (628)
T ss_dssp EEEEE--ETTEEEEEESSCTTCEEECCC-----CSCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSS
T ss_pred EEEEE--eCCcEEEEECCCCCcceEEEc-----CCCCceEEEEEECCCCEEEEEE--CCCCeEEEEECCCCCcEEEEeCC
Confidence 67777 478999999998766665553 2578999999999999999999 88899999999999999999988
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
+..|. ||||||.+++|||+|...++|++++++|+.+++++...+..|++|||||.+|+||||||+..++|+|++|
T Consensus 79 -~~~P~----GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 79 -LDYPE----GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp -CSCCC----EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred -CCCcc----eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 88899 9999999999999999999999999999999999988899999999999999999999988899999999
Q ss_pred CCCCcEEEEeecccCceeEEEeccCCEEEEEe----------CCCCcEEEEEecCCCCceEEE-----------------
Q psy5768 162 DGKKQTILAQEIIMPIKDITLDLKFFSAFYRN----------LSKGNIHIISLSNLSDVSTIS----------------- 214 (652)
Q Consensus 162 dg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d----------~~g~~~~~i~~~~~~~~~~~~----------------- 214 (652)
||+.+++++. .+.+|+||++|+.+++|||+| ++|+.++ ++.....+|..++
T Consensus 154 dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~-v~~~~l~~P~glav~~~~ly~tD~~~~~I~ 231 (628)
T 4a0p_A 154 DGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE-VIADDLPHPFGLTQYQDYIYWTDWSRRSIE 231 (628)
T ss_dssp TSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECCSCEEEEEEETTEEEEEETTTTEEE
T ss_pred CCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE-EeeccCCCceEEEEECCEEEEecCCCCEEE
Confidence 9999998875 689999999999999999954 5665554 3332222222211
Q ss_pred ------------eecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecC-CCceEEEeCCc-cccCCCcccccceE
Q psy5768 215 ------------MKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNG-VSAVCACAHGV-VAQDGKSCSEYDAF 280 (652)
Q Consensus 215 ------------~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~-~~~~C~C~~G~-l~~dg~~C~~~~~~ 280 (652)
+..++ ..|++|+|||+.+|.+.|||..+||+|+|+|++.+ ++|+|+|+.|| |.+|+++|..+++|
T Consensus 232 ~~dk~tg~~~~~l~~~~-~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~ 310 (628)
T 4a0p_A 232 RANKTSGQNRTIIQGHL-DYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTF 310 (628)
T ss_dssp EEETTTCCSCEEEECSC-CSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSE
T ss_pred EEECCCCCceEEEecCC-CCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccce
Confidence 11122 36899999999999999999999999999999888 68999999998 66899999999999
Q ss_pred EEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-e------
Q psy5768 281 IMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-E------ 353 (652)
Q Consensus 281 Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~------ 353 (652)
|+|+++..|+++.+ +...... ..+ ...+++++.||+||+.+++|||+|...++|+++.++|+..+.++ +
T Consensus 311 Ll~s~~~~i~~i~l-~~~~~~~--~~l-~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~ 386 (628)
T 4a0p_A 311 LLFSQKSAINRMVI-DEQQSPD--IIL-PIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQN 386 (628)
T ss_dssp EEEEETTEEEEECC-CTTCCCC--EEC-CCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------
T ss_pred eeeeccceEEEEec-ccccCce--EEE-EehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccccccc
Confidence 99999999999998 4433211 112 12457889999999999999999999999999999998876666 4
Q ss_pred ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEee
Q psy5768 354 RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFF 433 (652)
Q Consensus 354 ~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~l 433 (652)
++..|+|||+||++++|||||...++|++++++|. .+.++....+.+|++|||||.+|+||||||+...++|+|+.|
T Consensus 387 ~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~---~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~ 463 (628)
T 4a0p_A 387 LEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGR---SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAAL 463 (628)
T ss_dssp -CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEET
T ss_pred ccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCC---eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeC
Confidence 46789999999999999999999999999999875 333444467899999999999999999999976459999999
Q ss_pred cCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEE
Q psy5768 434 SGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVL 513 (652)
Q Consensus 434 dG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~ 513 (652)
||+++++++..++.+|+||++|+.+++|||+|++.++|+++++||++|+++....+.||+||++++++||||||.+++|+
T Consensus 464 dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~ 543 (628)
T 4a0p_A 464 DGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIE 543 (628)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEE
T ss_pred CCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEE
Confidence 99999999998899999999999999999999999999999999999999987778999999999999999999999999
Q ss_pred EEEccCCceEEEEecccCCcceeEEEeccCC-CCCCCCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 514 RANKYTGEEVYTLRKNIRRPMGIVAISDNLD-ACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 514 ~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~-~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
+++|.+|+..+++...+..|++|++++...+ +...|||..+||+|+|+|++.|.+.++|+||+||+|.+| ++|..
T Consensus 544 ~~~k~~G~~~~~i~~~~~~~~~i~~~~~~~~~~~~~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~~ 620 (628)
T 4a0p_A 544 KIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGG 620 (628)
T ss_dssp EEETTSSSCCEEEECCCTTEEEEEEECCCCHHHHHHSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEEE
T ss_pred EEECcCCCCcEEEeccCCCCcceEEEeecccCccccccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCCC
Confidence 9999999999999988889999999985432 335699999999999999999988899999999999999 88864
No 2
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=4.9e-97 Score=838.10 Aligned_cols=556 Identities=28% Similarity=0.573 Sum_probs=474.8
Q ss_pred CCCeEEEEecCCCee-EEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc-cEEEEeCCCcCCc
Q psy5768 9 TQSKIVVCNLEGEYQ-TTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK-RETVVSQKKYPAV 86 (652)
Q Consensus 9 ~~~~I~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~-~~~v~~~~~~~~p 86 (652)
+...|+++++++... .++.. ..++.|.+||||+.+++|||+| ...++|+|+.++|+. .++++..+ +..|
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~------~~~~~~~~ld~~~~~~~ly~sD--~~~~~I~r~~~~g~~~~~~v~~~~-~~~P 86 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVV------GGLEDAAAVDFVFSHGLIYWSD--VSEEAIKRTEFNKTESVQNVVVSG-LLSP 86 (619)
T ss_dssp CSSBEEEECCC---------C------BCCSCEEEEEEETTTTEEEEEE--TTTTEEEEEEC-----CEEEECSS-CSCE
T ss_pred ccccEEEEeCCCCcceEEEEE------cCCCceEEEEEEeCCCEEEEEE--CCCCeEEEEEccCCCceEEEEeCC-CCCc
Confidence 578999999998642 22222 2678999999999999999999 888999999999985 47788888 8899
Q ss_pred cCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCc
Q psy5768 87 TACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166 (652)
Q Consensus 87 ~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~ 166 (652)
+ |||+||++++|||+|...++|++++++|+.+++++...+..|++|||||.+|+||||||+..++|+|++|||+.+
T Consensus 87 ~----GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 87 D----GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp E----EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred C----eEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 9 999999999999999999999999999999999998889999999999999999999999889999999999999
Q ss_pred EEEEeecccCceeEEEeccCCEEEEEe----------CCCCcEEEEEecCCCCceE------------------EEeec-
Q psy5768 167 TILAQEIIMPIKDITLDLKFFSAFYRN----------LSKGNIHIISLSNLSDVST------------------ISMKP- 217 (652)
Q Consensus 167 ~~~~~~~~~~p~gl~lD~~~~~ly~~d----------~~g~~~~~i~~~~~~~~~~------------------~~~~~- 217 (652)
.+++...+.+|+|||+|+.+++|||+| ++|+.++.+......+|.. ..+..
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKY 242 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESS
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECC
Confidence 999988899999999999999999955 5555554443211111111 11111
Q ss_pred ---------CCCCCcceeeeeeeccC-CCCCCCCCCCCCCcccceecCC--CceEEEeCCc-cccCCCccc-ccceEEEE
Q psy5768 218 ---------YGDSYLKDIKIYSKDAQ-TGTNPCGVNNGGCAELCLYNGV--SAVCACAHGV-VAQDGKSCS-EYDAFIMY 283 (652)
Q Consensus 218 ---------~~~~~~~~i~v~~~~~q-~~~n~C~~~ng~Cs~lC~~~~~--~~~C~C~~G~-l~~dg~~C~-~~~~~Ll~ 283 (652)
.....|++|++||+.+| ...|||..+||+|||+|++.+. +|+|+||.|| |..|+++|. .+++||+|
T Consensus 243 tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~ 322 (619)
T 3s94_A 243 TGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLL 322 (619)
T ss_dssp SCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEE
T ss_pred CCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEE
Confidence 11136899999999999 4899999999999999998764 7999999998 678999999 47899999
Q ss_pred eeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeE
Q psy5768 284 SRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLA 362 (652)
Q Consensus 284 s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glA 362 (652)
+.+..|++++| +..+.+. ......++.++.||+||+.+++|||+|...++|+|+.++|+..++++ .++..|.|||
T Consensus 323 ~~~~~i~~i~l-~~~~~~~---~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlA 398 (619)
T 3s94_A 323 ARRTDLRRISL-DTPDFTD---IVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIA 398 (619)
T ss_dssp EESSCEEEEES-SSTTCCC---EECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EcccceEEEec-CCCccce---eEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceE
Confidence 99999999999 5544331 11122456889999999999999999999999999999998888777 6788999999
Q ss_pred EEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE
Q psy5768 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII 442 (652)
Q Consensus 363 vDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~ 442 (652)
+||++++|||||...++|++++++|.. +++++ ...+..|++|||||.+|+||||||+.. ++|+|+.|||+++++++
T Consensus 399 vD~~~~~lY~tD~~~~~I~v~~~~G~~--~~~l~-~~~l~~P~~iavdp~~G~ly~tD~g~~-~~I~r~~~dG~~~~~l~ 474 (619)
T 3s94_A 399 VDWVARNLYWTDTGTDRIEVTRLNGTM--RKILI-SEDLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDGSDRVVLV 474 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS--CEEEE-CTTCCSEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEE
T ss_pred EecccCcEEEEeCCCCcEEEEeCCCCe--EEEEE-ECCCCCeeeEEEEcCCCcEEEecCCCC-CEEEEEccCCCccEEEE
Confidence 999999999999999999999998864 44444 467899999999999999999999863 69999999999999999
Q ss_pred EcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCce
Q psy5768 443 TTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEE 522 (652)
Q Consensus 443 ~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~ 522 (652)
...+.+|+|||+|+.+++|||+|++.++|++++++|+.++++....+.+|+||++++++||||||.+++|++++|.+| .
T Consensus 475 ~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~ 553 (619)
T 3s94_A 475 NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-E 553 (619)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC-C
T ss_pred eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-c
Confidence 888999999999999999999999999999999999999999887789999999999999999999999999999999 5
Q ss_pred EEEEecccCCcceeEEEeccCCCCCCCCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 523 VYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 523 ~~~~~~~~~~p~~i~~~~~~~~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
.+++..++..|++|++++...|+ ..|||..+||+|+|+|++.|.+ ++|+||+||.|.+| ++|.+
T Consensus 554 ~~~~~~~~~~~~~i~~~~~~~~~-~~~~C~~~ng~C~~~C~~~~~~-~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 554 REVIIDQLPDLMGLKATNVHRVI-GSNPCAEENGGCSHLCLYRPQG-LRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp EEEEECSCCCEEEEEEEESSCCC-CCCGGGSGGGGCSSEEEEETTE-EEEECCTTCEECSSTTCEEC
T ss_pred eEEEecCCCCCceeeeccccccc-ccccCCCCCCChhHhhccCCCC-eEEECCCCCEECCCCCcCCC
Confidence 57777788899999999876555 6799999999999999999885 99999999999999 89975
No 3
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-62 Score=516.12 Aligned_cols=338 Identities=28% Similarity=0.579 Sum_probs=296.1
Q ss_pred CCCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccc--ccceEEEEeeecceeEEecCCCCCCCCCceeeeecccc
Q psy5768 237 TNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS--EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMM 313 (652)
Q Consensus 237 ~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~--~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~ 313 (652)
+|||. .|++|+|+|++.+++|+|.|+.|| |..|+++|. .+++||+|++.+.|+++++ ++.... .+ ...+
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~I~~i~~-~g~~~~----~~--~~~~ 72 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLP-HRSEYT----LL--LNNL 72 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSSCEEESSSCCEEEEECBSCEEEECT-TSCCEE----EE--ECSC
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccccCceeEeecccceEEEeC-CCCeeE----Ee--ecCC
Confidence 47998 689999999998889999999999 667999998 5689999999999999998 554322 22 1345
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
.++.+++||+.+++|||+|...++|++++++|+..+.++ .++..|.|||+||.+++|||+|...++|.+++++|.. +
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--~ 150 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--R 150 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--C
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc--e
Confidence 779999999999999999999999999999998877776 6788999999999999999999999999999998864 3
Q ss_pred EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEE
Q psy5768 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIE 472 (652)
Q Consensus 393 ~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~ 472 (652)
.. +....+..|++|||||..|+||||||+.. ++|+|+.|||+.+++++...+.+|+||++|+.+++|||+|...++|+
T Consensus 151 ~~-l~~~~l~~P~~iavdp~~g~ly~td~~~~-~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 151 KV-LLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp EE-EECTTCSCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EE-EEeCCCCCcceEEEecCcCeEEEeccCCC-CEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 43 33467899999999999999999999862 59999999999999988888999999999999999999999999999
Q ss_pred EEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEecccCCcceeEEEeccCCCCCCCCCC
Q psy5768 473 RCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCR 552 (652)
Q Consensus 473 ~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~C~ 552 (652)
+++++|..+++++...+.+|+||++++++|||+||.+++|.+++|.+|+..+++...+..|++|+++|+..|+...|||.
T Consensus 229 ~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~qp~~~n~C~ 308 (349)
T 3v64_C 229 RANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCG 308 (349)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGGGSCCCCCTTT
T ss_pred EEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccccCccccCccc
Confidence 99999999998887778999999999999999999999999999999999999988889999999999988888889999
Q ss_pred CCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 553 HLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 553 ~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
.+||+|+||||+.|. +++|+||+||+ ..| ++|.+
T Consensus 309 ~~~g~C~~lCl~~~~-~~~C~C~~g~~-~~d~~~C~~ 343 (349)
T 3v64_C 309 DNNGGCTHLCLPSGQ-NYTCACPTGFR-KINSHACAL 343 (349)
T ss_dssp TGGGGCSSEEECCTT-SCEEECCTTEE-EETTTEEEE
T ss_pred CCCCCcccEeecCCC-CCeeECCCCCc-CCCCCcccc
Confidence 999999999999998 69999999999 788 99986
No 4
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=2.9e-59 Score=503.83 Aligned_cols=342 Identities=26% Similarity=0.542 Sum_probs=302.5
Q ss_pred CCCCCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccc--ccceEEEEeeecceeEEecCCCCCCCCCceeeeecc
Q psy5768 235 TGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS--EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNST 311 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~--~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~ 311 (652)
.++++|.. ++.|+|.|+..+++|+|.|+.|| +..++++|. .+++||++++++.|+++++ ++.... .+ ..
T Consensus 38 ~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~I~~i~l-~~~~~~----~~--~~ 109 (400)
T 3p5b_L 38 EDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTL-DRSEYT----SL--IP 109 (400)
T ss_dssp EECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTEEEEECT-TSCSCE----EE--EC
T ss_pred cCchhhhc-cCCCCCccCCCccceeeeccccccccccccceeeccccceeEEeccceeEEEcc-CCccee----Ee--cc
Confidence 56899984 57899999988889999999998 557999998 5679999999999999999 554432 22 24
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccC----CcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG----SNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g----~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
.+.++.+|+||+.+++|||+|...++|+++.++| +..+.++ .++..|.|||+||++++|||+|...++|++++++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 5688999999999999999999999999999998 3456666 5888999999999999999999999999999998
Q ss_pred CCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC
Q psy5768 387 SPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466 (652)
Q Consensus 387 ~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~ 466 (652)
|.. +++++ ...+..|++|||||..|+||||||+.. ++|+|+.|||+.+++++...+.+|+|||+|+.+++|||+|.
T Consensus 190 g~~--~~~l~-~~~~~~P~~iavdp~~g~ly~td~~~~-~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 190 GVK--RKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TCS--EEEEE-ECSSCCEEEEEEETTTTEEEEEECSSS-CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCc--eEEEE-eCCCCCcceEEEecccCeEEEEeCCCC-CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 753 34444 467899999999999999999999864 59999999999999999888999999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEecC--CCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEecccCCcceeEEEeccCC
Q psy5768 467 RLDKIERCDYDGTNRIVLSKI--SPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLD 544 (652)
Q Consensus 467 ~~~~I~~~~ldG~~~~~l~~~--~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~ 544 (652)
..++|++++++|..+++++.. .+.+|+||++++++|||+||.+++|++++|.+|+...++..++..|++|+++|+..|
T Consensus 266 ~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~q 345 (400)
T 3p5b_L 266 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQ 345 (400)
T ss_dssp TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGGS
T ss_pred CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeeccC
Confidence 999999999999999998764 378999999999999999999999999999999999999888899999999999888
Q ss_pred CCCCCCCC---CCCCCCccccccCCCC-----ceeeeccCceeeccC-CcccC
Q psy5768 545 ACAKTPCR---HLNGNCDDICKLDETG-----QVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 545 ~~~~~~C~---~~ng~Cs~lCl~~~~~-----~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
+...|||. .+||+|+|+|++.|.. .++|+||+||+|..| ++|.+
T Consensus 346 p~~~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 398 (400)
T 3p5b_L 346 PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 398 (400)
T ss_dssp CCCCCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTCEECTTSSSEES
T ss_pred CCCCCccccccCCCcCcCCeecCCCcccCCCCCeeEECCCCCEECCCCCccCC
Confidence 88889995 4689999999998753 699999999999999 89976
No 5
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-58 Score=497.02 Aligned_cols=339 Identities=28% Similarity=0.579 Sum_probs=293.1
Q ss_pred CCCCCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccc--ccceEEEEeeecceeEEecCCCCCCCCCceeeeecc
Q psy5768 235 TGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS--EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNST 311 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~--~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~ 311 (652)
.++++|. .++.|+|.|+..+++|+|.|+.|| +..|+++|. .+++||+++.+..|+++++ ++.... .+. .
T Consensus 42 ~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~I~~i~~-~~~~~~----~~~--~ 113 (386)
T 3v65_B 42 QDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLP-HRSEYT----LLL--N 113 (386)
T ss_dssp -----------CCTTEEC-----CCEECCTTEEECTTSSCEEECSSCCEEEEECBSCEEEECT-TSCCCE----EEE--C
T ss_pred CccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccccceeEeecCccceeecc-CCCcEE----EEe--c
Confidence 5689998 467999999988889999999998 667999998 5689999999999999998 554322 221 3
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
.+..+.+++||+.+++|||+|...++|++++++|+..+.++ .++..|.|||+||.+++|||+|...++|++++++|..
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~- 192 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH- 192 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence 46789999999999999999999999999999998777766 6788999999999999999999999999999998754
Q ss_pred ccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCe
Q psy5768 391 QRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDK 470 (652)
Q Consensus 391 ~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~ 470 (652)
+..+ ....+..|++|||||..|+||||||+.. ++|+|+.|||+.+++++...+.+|+||++|+.+++|||+|...++
T Consensus 193 -~~~l-~~~~l~~P~giavdp~~g~ly~td~~~~-~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 193 -RKVL-LWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp -CEEE-ECSSCSCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred -eEEe-ecCCCCCCcEEEEEcCCCeEEEeccCCC-CEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 3443 3467899999999999999999999862 599999999999999998889999999999999999999999999
Q ss_pred EEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEecccCCcceeEEEeccCCCCCCCC
Q psy5768 471 IERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTP 550 (652)
Q Consensus 471 I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~ 550 (652)
|++++++|..+++++...+.+|+||++++++|||+||.+++|.+++|.+|+..+++...+..|++|+++|+..|+...||
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~~~~n~ 349 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNR 349 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSCCCCCT
T ss_pred EEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEEchhcCcCCcCc
Confidence 99999999999988887789999999999999999999999999999999999999988899999999999888888899
Q ss_pred CCCCCCCCccccccCCCCceeeeccCceeeccC-Cccc
Q psy5768 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSC 587 (652)
Q Consensus 551 C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~ 587 (652)
|..+||+|+||||+.|. .++|+||+||+ ..| ++|.
T Consensus 350 C~~~ng~C~~lCl~~~~-~~~C~C~~g~~-~~d~~~C~ 385 (386)
T 3v65_B 350 CGDNNGGCTHLCLPSGQ-NYTCACPTGFR-KINSHACA 385 (386)
T ss_dssp TTTSCTTSSSEEECCSS-SCEEECCTTCB-CSSSSCCB
T ss_pred cccCCCCCCceeeeCCC-CCeeECCCCCc-CCCCCccC
Confidence 99999999999999998 69999999999 778 8886
No 6
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=3e-57 Score=522.34 Aligned_cols=342 Identities=25% Similarity=0.550 Sum_probs=301.7
Q ss_pred CCCCCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccc--ccceEEEEeeecceeEEecCCCCCCCCCceeeeecc
Q psy5768 235 TGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS--EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNST 311 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~--~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~ 311 (652)
.++++|. .++.|+|+|+..+++|+|.|+.|| +..++++|. ...++|++++...|+++.+ +..++. .+. .
T Consensus 350 ~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~Ir~i~l-~~~~~~----~l~--~ 421 (791)
T 3m0c_C 350 EDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTL-DRSEYT----SLI--P 421 (791)
T ss_dssp ECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSSEEEECT-TSCCCE----EEE--C
T ss_pred ccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeeecccccccccccccceeEeec-cCCcce----eee--c
Confidence 5688998 467899999988889999999998 557899998 5678999999999999998 554432 222 3
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccCC----cceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGS----NHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~----~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
.+++++||+||+.+++|||+|...++|+++.++|. ..++++ .++..|.||||||++++|||+|...++|++++++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 56889999999999999999999999999999984 445666 5889999999999999999999999999999998
Q ss_pred CCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC
Q psy5768 387 SPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466 (652)
Q Consensus 387 ~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~ 466 (652)
|.. +++++ ...+..|++|||||.+|+||||||+.. ++|+|+.|||+.+++++...+.+|+|||||+.+++|||+|+
T Consensus 502 G~~--~~~l~-~~~l~~P~gIaVDp~~g~LYwtD~g~~-~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 502 GVK--RKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp SSS--EEEEE-ECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCe--EEEEE-eCCCCCcceEEEecCCCCEEEecCCCC-CeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 864 34444 467899999999999999999999864 49999999999999999989999999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEecC--CCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEecccCCcceeEEEeccCC
Q psy5768 467 RLDKIERCDYDGTNRIVLSKI--SPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLD 544 (652)
Q Consensus 467 ~~~~I~~~~ldG~~~~~l~~~--~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~ 544 (652)
+.++|++++++|..+++++.. .+.+|+||++++++|||+||.+++|++++|.+|+.+.++..++..|++|+++|+..|
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Q 657 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQ 657 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGS
T ss_pred CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccC
Confidence 999999999999999999875 378999999999999999999999999999999999999888899999999999888
Q ss_pred CCCCCCCCC---CCCCCccccccCCC-----CceeeeccCceeeccC-CcccC
Q psy5768 545 ACAKTPCRH---LNGNCDDICKLDET-----GQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 545 ~~~~~~C~~---~ng~Cs~lCl~~~~-----~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
+...|||.. +||+|+||||++|. ..|+|+||+||+|..| ++|.+
T Consensus 658 p~~~N~C~~~~~~ng~CshlCl~~p~~~~~~~~~~C~Cp~g~~L~~d~~tC~~ 710 (791)
T 3m0c_C 658 PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 710 (791)
T ss_dssp CCCCCTTTSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC
T ss_pred CCCCCcccccCCCCcCcCeeecCCCCcCCCCCCceeECCCCCEECCCCCcCCC
Confidence 888899986 79999999999875 2699999999999999 99986
No 7
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=7.9e-54 Score=446.77 Aligned_cols=304 Identities=30% Similarity=0.590 Sum_probs=268.8
Q ss_pred ccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc-eEEe-e
Q psy5768 276 EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH-RVLL-E 353 (652)
Q Consensus 276 ~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~-~~i~-~ 353 (652)
+++|||||++++.|+++++ ++.... ...+ ...+.+++|++||+.+++|||+|...++|+++.++|+.. +.++ .
T Consensus 2 g~~p~ll~~~~~~I~~i~l-~~~~~~--~~~~--~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~ 76 (318)
T 3sov_A 2 GSAPLLLYANRRDLRLVDA-TNGKEN--ATIV--VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS 76 (318)
T ss_dssp --CCEEEEECEEEEEEEET-TCTTSC--CEEE--EEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE
T ss_pred CCccEEEEEccCeEEEEEC-CCCceE--EEEE--ecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC
Confidence 3689999999999999999 554311 1111 134578899999999999999999999999999998753 3344 7
Q ss_pred ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEee
Q psy5768 354 RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFF 433 (652)
Q Consensus 354 ~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~l 433 (652)
++..|.|||+||.+++|||+|...++|++++++|.. ++.++ ...+..|++||+||..|+||||||+.. ++|+|+.|
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--~~~l~-~~~~~~P~giavdp~~g~ly~td~~~~-~~I~r~~~ 152 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL--RKVLF-WQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGM 152 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEE-CSSCSSEEEEEEEGGGTEEEEEECSSS-CEEEEEET
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc--EEEEE-eCCCCCccEEEEeCCCCEEEEEecCCC-CEEEEEEc
Confidence 888999999999999999999999999999998854 34433 467899999999999999999999853 59999999
Q ss_pred cCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEE
Q psy5768 434 SGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVL 513 (652)
Q Consensus 434 dG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~ 513 (652)
||+.+++++...+.+|+||++|+.+++|||+|...++|++++++|++++++....+.+|+||+++++.|||+||.+++|.
T Consensus 153 dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 153 DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSIL 232 (318)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEE
T ss_pred CCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEE
Confidence 99999999988899999999999999999999999999999999999999987678999999999999999999999999
Q ss_pred EEEccCCceEEEEecccCCcceeEEEeccCCCCCCCCCCCCCCCCccccccCCCC-ceeeeccCceeeccC-CcccC
Q psy5768 514 RANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETG-QVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 514 ~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~C~~~ng~Cs~lCl~~~~~-~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++++.+|+..+++...+..|++|+++|+..|+...|||..+||+|+|+|++.|.+ +++|+||+||.|.+| ++|..
T Consensus 233 ~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~q~~~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 233 ACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp EEETTTCCSCEEEECCCSSCCCEEEECGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred EEECCCCCceEEEeCCCCCCcEEEEeccccccccccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 9999999988888888899999999999888877899999999999999999875 699999999999999 88876
No 8
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=2.4e-51 Score=428.51 Aligned_cols=300 Identities=26% Similarity=0.545 Sum_probs=262.5
Q ss_pred ceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccC----CcceEEe-
Q psy5768 278 DAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG----SNHRVLL- 352 (652)
Q Consensus 278 ~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g----~~~~~i~- 352 (652)
++||||++++.|+++++ +..++. ..+ ..+.++.+++||+.+++|||+|...++|++++++| +..+.++
T Consensus 1 ~~~ll~~~~~~I~~i~~-~~~~~~---~~~---~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTL-DRSEYT---SLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp CCEEEEECBSSEEEEET-TSCCCE---EEE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred CCEEEEECCCeEEEEEC-CCcceE---ehh---cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 58999999999999999 554432 222 34678999999999999999999999999999987 5555666
Q ss_pred eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEe
Q psy5768 353 ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAF 432 (652)
Q Consensus 353 ~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ 432 (652)
.++..|.|||+||.+++|||+|...++|.++++++.. ++.++ ...+..|++||+||..|+|||+||+.. ++|+|+.
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~--~~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~-~~I~~~~ 149 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--RKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGG 149 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--EEEEE-ECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEE
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc--eEEEE-ECCCCCcceEEeCCCCCEEEEEccCCC-CeEEEEc
Confidence 5778999999999999999999999999999998753 34444 356789999999999999999999852 5999999
Q ss_pred ecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecC--CCCceeEEEEeCCEEEEEcCCCC
Q psy5768 433 FSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKI--SPLHPFDMAVYGEFIFWTDWVIH 510 (652)
Q Consensus 433 ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~--~~~~p~glav~~~~lYwtd~~~~ 510 (652)
|||+.+++++...+.+|+||++|+.+++|||+|...++|++++++|..++++... .+.+|+||++++++|||+||.++
T Consensus 150 ~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~ 229 (316)
T 1ijq_A 150 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINE 229 (316)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTT
T ss_pred CCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCC
Confidence 9999999888878999999999999999999999999999999999999988764 36899999999999999999999
Q ss_pred eEEEEEccCCceEEEEecccCCcceeEEEeccCCCCCCCCCCCC---CCCCccccccCCC-----CceeeeccCceeecc
Q psy5768 511 AVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHL---NGNCDDICKLDET-----GQVVCSCFTGKVLME 582 (652)
Q Consensus 511 ~I~~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~C~~~---ng~Cs~lCl~~~~-----~~~~C~Cp~g~~l~~ 582 (652)
+|.++++.+|+..+++..++..|++|+++|...|+...|||..+ ||+|+|+|+++|. ++++|+||+||+|.+
T Consensus 230 ~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~ 309 (316)
T 1ijq_A 230 AIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAR 309 (316)
T ss_dssp EEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred eEEEEeCCCCcceEEEecCCCCceEEEEeccccCCcccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECC
Confidence 99999999999888888888899999999988888788999988 9999999999873 479999999999999
Q ss_pred C-CcccC
Q psy5768 583 D-NRSCT 588 (652)
Q Consensus 583 d-~~C~~ 588 (652)
| ++|.+
T Consensus 310 d~~~C~~ 316 (316)
T 1ijq_A 310 DMRSCLT 316 (316)
T ss_dssp TSSCEEC
T ss_pred CCCccCC
Confidence 9 88863
No 9
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=7.8e-52 Score=468.69 Aligned_cols=301 Identities=28% Similarity=0.561 Sum_probs=268.8
Q ss_pred ccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-ec
Q psy5768 276 EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ER 354 (652)
Q Consensus 276 ~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~ 354 (652)
.+++||+|+++..|++++| ++.+.. ..+ ...+++++.+|+||+.+++|||+|...++|++++++|+..+.++ .+
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l-~~~~~~---~~~-~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g 78 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISL-ETNNNN---VAI-PLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG 78 (628)
T ss_dssp -CCCEEEEEETTEEEEEES-SCTTCE---EEC-CCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred CCCcEEEEEeCCcEEEEEC-CCCCcc---eEE-EcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC
Confidence 4789999999999999999 543322 112 12456789999999999999999999999999999998888777 67
Q ss_pred cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 355 ~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
+..|.|||+||++++|||+|...++|++++++|.. +++++ ...+..|++|||||.+|+||||||+.. ++|+|+.||
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~--~~~l~-~~~l~~P~~iavdp~~G~lY~tD~g~~-~~I~r~~~d 154 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH--RQVLV-WKDLDSPRALALDPAEGFMYWTEWGGK-PKIDRAAMD 154 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT--CEEEE-CSSCCCEEEEEEETTTTEEEEEECSSS-CEEEEEETT
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc--EEEEE-eCCCCCcccEEEccCCCeEEEeCCCCC-CEEEEEeCC
Confidence 78999999999999999999999999999998864 34443 468899999999999999999999853 699999999
Q ss_pred CCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEE
Q psy5768 435 GFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLR 514 (652)
Q Consensus 435 G~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~ 514 (652)
|+.+++++. .+.+|+||++|+.+++|||+|.+.++|++++++|..++++.. .+.+|+||++++++||||||.+++|++
T Consensus 155 G~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~-~l~~P~glav~~~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 155 GSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD-DLPHPFGLTQYQDYIYWTDWSRRSIER 232 (628)
T ss_dssp SCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-CCSCEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec-cCCCceEEEEECCEEEEecCCCCEEEE
Confidence 999999885 789999999999999999999999999999999999976654 579999999999999999999999999
Q ss_pred EEccCCceEEEEecccCCcceeEEEeccCCCCCCCCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 515 ANKYTGEEVYTLRKNIRRPMGIVAISDNLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 515 ~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++|.+|+..+++..++..|++|+++|...|+ ..|||..+||+|+|+|++.|.++++|+||.||.|..| ++|.+
T Consensus 233 ~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~-~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 233 ANKTSGQNRTIIQGHLDYVMDILVFHSSRQS-GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp EETTTCCSCEEEECSCCSCCEEEEECGGGSC-CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred EECCCCCceEEEecCCCCcceeeeeeecccc-cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 9999999999999888899999999987776 5799999999999999999966899999999999999 89976
No 10
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=7.7e-53 Score=483.78 Aligned_cols=343 Identities=26% Similarity=0.534 Sum_probs=295.9
Q ss_pred CCCCCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccc--ccceEEEEeeecceeEEecCCCCCCCCCceeeeecc
Q psy5768 235 TGTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS--EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNST 311 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~--~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~ 311 (652)
.++++|.. +++|+|+|+..+++|+|.|+.|| +..++++|. ...++||+++...|+++++ +...+. .+ ..
T Consensus 332 ~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~I~~id~-~~~~~~----~~--~~ 403 (699)
T 1n7d_A 332 EDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTL-DRSEYT----SL--IP 403 (699)
T ss_dssp CCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC-CEECT-TSCCEE----CC--SC
T ss_pred cCccccCC-CCccccccccCCCCeeeeeecccccCCCCCcccccccceeEEecCccceEEEeC-CCCcce----ee--ec
Confidence 57899974 57899999988889999999998 556899998 5678999999999999998 443322 11 13
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccC----CcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG----SNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g----~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
.+.++.+|+||+.+++|||+|...++|++++++| +..+.++ .++..|.||||||.+++|||+|...++|.+++++
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 3567889999999999999999999999999987 4444555 5677899999999999999999999999999988
Q ss_pred CCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC
Q psy5768 387 SPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466 (652)
Q Consensus 387 ~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~ 466 (652)
+.. ..++....+..|++|||||..|+||||||+.. ++|+|+.|+|+.+++++...+.+|+|||||+.+++|||+|.
T Consensus 484 g~~---~~~l~~~~~~~P~giavDp~~g~ly~td~~~~-~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 484 GVK---RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp SCC---EEEECCCSSCCCCCEECCSSSSCCEECCCSSS-CCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred CCc---eEEEEeCCCCCcceEEEccCCCcEEEcccCCC-CeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 753 33333346789999999999999999999853 59999999999999888878999999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEecC--CCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEecccCCcceeEEEeccCC
Q psy5768 467 RLDKIERCDYDGTNRIVLSKI--SPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAISDNLD 544 (652)
Q Consensus 467 ~~~~I~~~~ldG~~~~~l~~~--~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~~~~~~~ 544 (652)
..++|++++++|.++++++.. .+.+|+||++++++|||+||.+++|.++++.+|+.+++|...+..|++|+++|...|
T Consensus 560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~q 639 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQ 639 (699)
T ss_dssp TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSS
T ss_pred CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccC
Confidence 999999999999999998763 368999999999999999999999999999999988888877889999999999888
Q ss_pred CCCCCCCCCC---CCCCccccccCCC-----CceeeeccCceeeccC-CcccCc
Q psy5768 545 ACAKTPCRHL---NGNCDDICKLDET-----GQVVCSCFTGKVLMED-NRSCTI 589 (652)
Q Consensus 545 ~~~~~~C~~~---ng~Cs~lCl~~~~-----~~~~C~Cp~g~~l~~d-~~C~~~ 589 (652)
+...|||..+ ||+|+||||++|. ..|+|+||+||+|..| ++|.+.
T Consensus 640 p~~~n~C~~~~~~ng~Cs~lCl~~p~~~~~~~~~~C~Cp~g~~l~~d~~~C~~~ 693 (699)
T 1n7d_A 640 PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTE 693 (699)
T ss_dssp CCSCCSSCSSSCSSCSCTTCCBCCCCCTTCSCSCBCCCCSSCEECSSTTCEECC
T ss_pred CCCCCCccccCCCCCCCCcccCcCcccCCCCCCcEEECcCCCEECCCCCccCCC
Confidence 8888999987 9999999998763 2699999999999998 899874
No 11
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=1.3e-45 Score=417.42 Aligned_cols=466 Identities=18% Similarity=0.305 Sum_probs=339.8
Q ss_pred eEEEecCCCCeEEEEecCCCee-EEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeC
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQ-TTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ 80 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~ 80 (652)
.|+++|..+++|++++++|... .+++.. .+..|.|||+|+.+++|||+| ...++|.+++++|+.+++++..
T Consensus 53 ~ly~sD~~~~~I~r~~~~g~~~~~~v~~~------~~~~P~GlAvD~~~~~ly~~d--~~~~~I~v~~~dG~~~~~l~~~ 124 (619)
T 3s94_A 53 LIYWSDVSEEAIKRTEFNKTESVQNVVVS------GLLSPDGLACDWLGEKLYWTD--SETNRIEVSNLDGSLRKVLFWQ 124 (619)
T ss_dssp EEEEEETTTTEEEEEEC-----CEEEECS------SCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECS
T ss_pred EEEEEECCCCeEEEEEccCCCceEEEEeC------CCCCcCeEEEEecCCEEEEEe--CCCCEEEEEECCCCCEEEEEeC
Confidence 5899999999999999998743 344432 567899999999999999999 8899999999999999999877
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeCC-CCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDPK-ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 159 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~~-~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~ 159 (652)
. +..|. +||||...+.|||+|.+ ..+|+++++||+.+++++...+..|.+|++|+.++.|||+|.+ ...|+++
T Consensus 125 ~-l~~P~----~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~-~~~I~~~ 198 (619)
T 3s94_A 125 E-LDQPR----AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK-LNFIHKS 198 (619)
T ss_dssp S-CSCCC----CEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETT-TCCEEEE
T ss_pred C-CCCCc----eEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCC-CCeEEEe
Confidence 7 88999 99999999999999965 5799999999999999998889999999999999999999986 5689999
Q ss_pred eCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecC----------CCCceEEEeecCCCCCcceeeee
Q psy5768 160 GLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSN----------LSDVSTISMKPYGDSYLKDIKIY 229 (652)
Q Consensus 160 ~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~i~v~ 229 (652)
+++|+.+..++...+..|.||+++. ++|||+|...+.+..+-... ...+..+.+.+... +|....--
T Consensus 199 ~~dG~~~~~~~~~~~~~P~gi~~~~--~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~-qp~~~n~C 275 (619)
T 3s94_A 199 NLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQR-QPNATNPC 275 (619)
T ss_dssp SSSCCEEC---------CCCEEESS--SEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGG-SCCCCCTT
T ss_pred cCCCCccEEEEeCCCCCceEEEEeC--CEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEcccc-CCCccccc
Confidence 9999999988876788999999974 49999887654444433322 22333333432221 22110000
Q ss_pred eeccCCCCCCCCCCCCCCcccce------ecCCCceEEEeCC-ccc-----------cCCC--c----------------
Q psy5768 230 SKDAQTGTNPCGVNNGGCAELCL------YNGVSAVCACAHG-VVA-----------QDGK--S---------------- 273 (652)
Q Consensus 230 ~~~~q~~~n~C~~~ng~Cs~lC~------~~~~~~~C~C~~G-~l~-----------~dg~--~---------------- 273 (652)
....-...+-|......-+..|. +.+.+.+|.-... +|. .+.. +
T Consensus 276 ~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld 355 (619)
T 3s94_A 276 GIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAID 355 (619)
T ss_dssp TTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEE
T ss_pred cCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEE
Confidence 00000112223221110011121 1111223321000 110 0000 0
Q ss_pred ccccceEEEEee--ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEE
Q psy5768 274 CSEYDAFIMYSR--VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVL 351 (652)
Q Consensus 274 C~~~~~~Ll~s~--~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i 351 (652)
-...+..|++++ ...|+++.+ +++.. ..+. ...+..+.++++|+..+.|||+|...++|.+++++|+.++++
T Consensus 356 ~d~~~~~ly~sD~~~~~I~r~~~-~g~~~----~~v~-~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l 429 (619)
T 3s94_A 356 YDPVEGYIYWTDDEVRAIRRSFI-DGSGS----QFVV-TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKIL 429 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEET-TSCSC----EEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEcCCCeEEEEeCCCCeEEEEEc-CCCcc----EEEE-ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEE
Confidence 001245677775 567899988 55432 1222 245677889999999999999999999999999999988888
Q ss_pred e-eccCceeeeEEEccCCEEEEEeCCC-CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceE
Q psy5768 352 L-ERQGSVEGLAYEYVHNYLYWTCNND-ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQ 429 (652)
Q Consensus 352 ~-~~~~~~~glAvDw~~~~LYwtd~~~-~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~ 429 (652)
+ +++..|.+||+|+..+.|||||.+. .+|+++.++|.. +..++ ...+..|.+||+|+..++|||+|.+.. +|+
T Consensus 430 ~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~--~~~l~-~~~l~~P~GlalD~~~~~LY~aD~~~~--~I~ 504 (619)
T 3s94_A 430 ISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD--RVVLV-NTSLGWPNGLALDYDEGKIYWGDAKTD--KIE 504 (619)
T ss_dssp ECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEE-CSSCSCEEEEEEETTTTEEEEEETTTT--EEE
T ss_pred EECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc--cEEEE-eCCCCCCeeeEEcccCCEEEEEECCCC--EEE
Confidence 7 6889999999999999999999764 799999999875 44443 457899999999999999999998854 999
Q ss_pred EEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEe
Q psy5768 430 RAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVY 498 (652)
Q Consensus 430 r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~ 498 (652)
++.+||+.+++++...+..|.|||++ +++|||+|...++|++++....+++++.. .+..|++|.++
T Consensus 505 ~~~~dG~~~~~~~~~~l~~P~glav~--~~~ly~tD~~~~~I~~~~k~~g~~~~~~~-~~~~~~~i~~~ 570 (619)
T 3s94_A 505 VMNTDGTGRRVLVEDKIPHIFGFTLL--GDYVYWTDWQRRSIERVHKRSAEREVIID-QLPDLMGLKAT 570 (619)
T ss_dssp EEESSSCCCEEEEECCCCSSCCEEEE--TTEEEEECTTSSCEEEEESSSCCEEEEEC-SCCCEEEEEEE
T ss_pred EEecCCCceEEEeccCCCCcEEEEEE--CCEEEEeecCCCeEEEEEcCCCceEEEec-CCCCCceeeec
Confidence 99999999999988889999999998 66999999999999999987667777665 45889999765
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-40 Score=347.68 Aligned_cols=259 Identities=27% Similarity=0.490 Sum_probs=222.4
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
|++++. ...|++++++|.....+.. .+..|.+|++|+.+++|||+| ...++|+|++++|+..+.++..+
T Consensus 46 ~ll~~~--~~~I~~i~~~g~~~~~~~~-------~~~~~~~l~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~ 114 (349)
T 3v64_C 46 VLLFAN--RIDIRQVLPHRSEYTLLLN-------NLENAIALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTG 114 (349)
T ss_dssp EEEEEC--BSCEEEECTTSCCEEEEEC-------SCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSS
T ss_pred eeEeec--ccceEEEeCCCCeeEEeec-------CCCceEEEEEeccccEEEEEe--ccCCceEEEecCCCCceEEEeCC
Confidence 677774 5679999999987777664 567899999999999999999 88899999999999988888888
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
+..|. |||+||.+++|||+|...++|++++++|+.+++++...+..|++|||||.+|+||||||+..++|+|+++
T Consensus 115 -~~~p~----glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 115 -LESPG----GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp -CSCCC----EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred -CCCcc----EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 88899 9999999999999999999999999999999999988899999999999999999999986589999999
Q ss_pred CCCCcEEEEeecccCceeEEEeccCCEEEEEe----------CCCCcEEEEEecCCCCceEEE-----------------
Q psy5768 162 DGKKQTILAQEIIMPIKDITLDLKFFSAFYRN----------LSKGNIHIISLSNLSDVSTIS----------------- 214 (652)
Q Consensus 162 dg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d----------~~g~~~~~i~~~~~~~~~~~~----------------- 214 (652)
||+.++.++...+.+|+||++|+.+++|||+| ++|++++.++......|..++
T Consensus 190 dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 190 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSIN 269 (349)
T ss_dssp TSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEE
T ss_pred CCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEE
Confidence 99999998888899999999999999999954 566655555432222222211
Q ss_pred -e-----------ecCCCCCcceeeeeeeccC-CCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccccc
Q psy5768 215 -M-----------KPYGDSYLKDIKIYSKDAQ-TGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEY 277 (652)
Q Consensus 215 -~-----------~~~~~~~~~~i~v~~~~~q-~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~ 277 (652)
+ ...+ ..|++|++||+.+| ...|||..+||+|+|||++.+.+|+|+||.||...|+++|..+
T Consensus 270 ~~~~~~G~~~~~i~~~~-~~p~gi~v~~~~~qp~~~n~C~~~~g~C~~lCl~~~~~~~C~C~~g~~~~d~~~C~~~ 344 (349)
T 3v64_C 270 SANKFTGKNQEIIRNKL-HFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRKINSHACALE 344 (349)
T ss_dssp EEETTTCCSCEEEECSC-SCCCCEEEECGGGSCCCCCTTTTGGGGCSSEEECCTTSCEEECCTTEEEETTTEEEEG
T ss_pred EEEccCCCccEEeccCC-CCCceEEEEccccCccccCcccCCCCCcccEeecCCCCCeeECCCCCcCCCCCcccch
Confidence 1 1112 36889999999999 6899999999999999999888999999999876699999743
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=3.6e-40 Score=343.59 Aligned_cols=260 Identities=29% Similarity=0.574 Sum_probs=218.2
Q ss_pred CeEEEecCCCCeEEEEecCCCe--eEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc-cEEE
Q psy5768 1 MFIAVSSPTQSKIVVCNLEGEY--QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK-RETV 77 (652)
Q Consensus 1 ~~i~v~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~-~~~v 77 (652)
.|++++. ...|+++++++.. ...+++ .++.+.+|++|+.+++|||+| ...++|+|+.++|+. .+.+
T Consensus 5 p~ll~~~--~~~I~~i~l~~~~~~~~~~~~-------~~~~~~~ld~d~~~~~lyw~D--~~~~~I~r~~~~g~~~~~~~ 73 (318)
T 3sov_A 5 PLLLYAN--RRDLRLVDATNGKENATIVVG-------GLEDAAAVDFVFSHGLIYWSD--VSEEAIKRTEFNKTESVQNV 73 (318)
T ss_dssp CEEEEEC--EEEEEEEETTCTTSCCEEEEE-------EEEEEEEEEEEGGGTEEEEEE--TTTTEEEEEETTSSSCCCEE
T ss_pred cEEEEEc--cCeEEEEECCCCceEEEEEec-------CCCccEEEEEEeCCCEEEEEE--CCCCcEEEEEccCCCceEEE
Confidence 3678885 6889999999874 333443 467899999999999999999 888999999999985 3566
Q ss_pred EeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5768 78 VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIA 157 (652)
Q Consensus 78 ~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~ 157 (652)
+..+ +..|+ |||+||.+++|||+|...++|++++++|+.+++++...+..|++|||||.+|+||||||+..++|+
T Consensus 74 ~~~~-l~~p~----glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~ 148 (318)
T 3sov_A 74 VVSG-LLSPD----GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIE 148 (318)
T ss_dssp EEEC-CSCCC----EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEE
T ss_pred EcCC-CCCcc----EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEE
Confidence 6777 88899 999999999999999999999999999999999988889999999999999999999998778999
Q ss_pred EEeCCCCCcEEEEeecccCceeEEEeccCCEEEEE----------eCCCCcEEEEEecCCCCceEEE-------------
Q psy5768 158 RAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR----------NLSKGNIHIISLSNLSDVSTIS------------- 214 (652)
Q Consensus 158 ~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~----------d~~g~~~~~i~~~~~~~~~~~~------------- 214 (652)
|+++||+.++.++...+.+|+||++|+.+++|||+ +++|++++.+.......|..++
T Consensus 149 r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~ 228 (318)
T 3sov_A 149 RAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWST 228 (318)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTT
T ss_pred EEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCC
Confidence 99999999999988889999999999999999995 4666666665532222222211
Q ss_pred ----------------eecCCCCCcceeeeeeeccCC-CCCCCCCCCCCCcccceecCC--CceEEEeCCc-cccCCCcc
Q psy5768 215 ----------------MKPYGDSYLKDIKIYSKDAQT-GTNPCGVNNGGCAELCLYNGV--SAVCACAHGV-VAQDGKSC 274 (652)
Q Consensus 215 ----------------~~~~~~~~~~~i~v~~~~~q~-~~n~C~~~ng~Cs~lC~~~~~--~~~C~C~~G~-l~~dg~~C 274 (652)
+.... ..|++|+|||+.+|. ..|||..+||+|+|+|++.|. +|+|+||.|| |.+|+++|
T Consensus 229 ~~V~~~~~~~G~~~~~i~~~~-~~P~~i~v~~~~~q~~~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c 307 (318)
T 3sov_A 229 HSILACNKYTGEGLREIHSDI-FSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTC 307 (318)
T ss_dssp TEEEEEETTTCCSCEEEECCC-SSCCCEEEECGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCB
T ss_pred CeEEEEECCCCCceEEEeCCC-CCCcEEEEeccccccccccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCC
Confidence 11111 368999999999994 689999999999999998775 6999999998 77899999
Q ss_pred ccc
Q psy5768 275 SEY 277 (652)
Q Consensus 275 ~~~ 277 (652)
.+.
T Consensus 308 ~~~ 310 (318)
T 3sov_A 308 KDG 310 (318)
T ss_dssp CC-
T ss_pred CCC
Confidence 853
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.8e-39 Score=349.54 Aligned_cols=258 Identities=27% Similarity=0.486 Sum_probs=218.6
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC----CccEEE
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG----TKRETV 77 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg----s~~~~v 77 (652)
|++++. ...|+++++++.....+++ .++.|.+||||+.+++|||+| ...++|+|+.++| +..+.+
T Consensus 85 ~ll~~~--~~~I~~i~l~~~~~~~~~~-------~~~~~~~l~~d~~~~~lywsD--~~~~~I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 85 YLFFTN--RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp EEEEEE--TTEEEEECTTSCSCEEEEC-------SCSCEEEEEEETTTTEEEEEE--TTTTEEEEEEC------CCCEEE
T ss_pred eeEEec--cceeEEEccCCcceeEecc-------ccCcceEEeeeeccCceEEEe--cCCCeEEEEEcccCCCCCcceEE
Confidence 677774 6899999999988877765 578999999999999999999 8889999999998 557888
Q ss_pred EeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5768 78 VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIA 157 (652)
Q Consensus 78 ~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~ 157 (652)
+..+ +..|. ||||||++++|||+|...++|++++++|+.+++++...+..|++|||||.+|+||||||+..++|+
T Consensus 154 ~~~~-~~~p~----glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~ 228 (400)
T 3p5b_L 154 ISRD-IQAPD----GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIK 228 (400)
T ss_dssp ECSS-CSCEE----EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEE
T ss_pred EeCC-CCCcc----cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEE
Confidence 8877 88999 999999999999999999999999999999999999889999999999999999999998778999
Q ss_pred EEeCCCCCcEEEEeecccCceeEEEeccCCEEEEE----------eCCCCcEEEEEecC--CCCceEEE-----------
Q psy5768 158 RAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR----------NLSKGNIHIISLSN--LSDVSTIS----------- 214 (652)
Q Consensus 158 ~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~----------d~~g~~~~~i~~~~--~~~~~~~~----------- 214 (652)
+++|||+.++.++...+.+|+|||+|+.+++|||+ +++|+++++++... ..++..++
T Consensus 229 ~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 229 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEES
T ss_pred EEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecC
Confidence 99999999999998889999999999999999995 46776666665421 12222211
Q ss_pred -------e-----------ecCCCCCcceeeeeeeccC-CCCCCCC---CCCCCCcccceecCC------CceEEEeCCc
Q psy5768 215 -------M-----------KPYGDSYLKDIKIYSKDAQ-TGTNPCG---VNNGGCAELCLYNGV------SAVCACAHGV 266 (652)
Q Consensus 215 -------~-----------~~~~~~~~~~i~v~~~~~q-~~~n~C~---~~ng~Cs~lC~~~~~------~~~C~C~~G~ 266 (652)
+ .... ..|++|+|||+.+| ...|||. .+||+|+|+|++.+. +|+|+||.||
T Consensus 309 ~~~~V~~~~~~~G~~~~~i~~~~-~~p~~i~v~~~~~qp~~~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~ 387 (400)
T 3p5b_L 309 INEAIFSANRLTGSDVNLLAENL-LSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGM 387 (400)
T ss_dssp SSCSEEEEESSSCCCCEEEECSC-SCEEEEEEESGGGSCCCCCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTC
T ss_pred CCCeEEEEEcCCCCceEEEecCC-CCCceEEEEeeccCCCCCCccccccCCCcCcCCeecCCCcccCCCCCeeEECCCCC
Confidence 1 1111 35899999999999 4899996 468999999998654 6999999998
Q ss_pred -cccCCCcccc
Q psy5768 267 -VAQDGKSCSE 276 (652)
Q Consensus 267 -l~~dg~~C~~ 276 (652)
|.+|+++|.+
T Consensus 388 ~l~~d~~~C~~ 398 (400)
T 3p5b_L 388 LLARDMRSCLT 398 (400)
T ss_dssp EECTTSSSEES
T ss_pred EECCCCCccCC
Confidence 7789999974
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=6.8e-39 Score=334.29 Aligned_cols=258 Identities=27% Similarity=0.480 Sum_probs=214.8
Q ss_pred CeEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC----CccEE
Q psy5768 1 MFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG----TKRET 76 (652)
Q Consensus 1 ~~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg----s~~~~ 76 (652)
.|++++. ...|+++++++.....+++ .++.|.++++|+.+++|||+| ...++|++++++| +..+.
T Consensus 2 ~~ll~~~--~~~I~~i~~~~~~~~~~~~-------~~~~p~g~~~d~~~~~ly~~D--~~~~~I~~~~~~g~~~~~~~~~ 70 (316)
T 1ijq_A 2 AYLFFTN--RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDT 70 (316)
T ss_dssp CEEEEEC--BSSEEEEETTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEE
T ss_pred CEEEEEC--CCeEEEEECCCcceEehhc-------CCCceEEEEEEeCCCEEEEEE--CCCCcEEEEECCCCCCCcccEE
Confidence 4788885 5789999999987767664 568999999999999999999 8889999999998 66677
Q ss_pred EEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5768 77 VVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 156 (652)
Q Consensus 77 v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I 156 (652)
++..+ +..|. |||+||.+++|||+|...++|++++++|+.+++++...+..|++|||||.+|+|||+||+..++|
T Consensus 71 ~~~~~-~~~p~----glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 71 VISRD-IQAPD----GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp EECSS-CSCCC----EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEeCC-CCCcC----EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeE
Confidence 77767 78899 99999999999999999999999999999999998878899999999999999999999866899
Q ss_pred EEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEE----------eCCCCcEEEEEec--CCCCceEEE----------
Q psy5768 157 ARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR----------NLSKGNIHIISLS--NLSDVSTIS---------- 214 (652)
Q Consensus 157 ~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~----------d~~g~~~~~i~~~--~~~~~~~~~---------- 214 (652)
+++++||+.+++++...+.+|+||++|+.+++|||+ +++|++++.+... ....|..++
T Consensus 146 ~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 146 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 225 (316)
T ss_dssp EEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred EEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEE
Confidence 999999999998887789999999999999999995 4666666655432 112222111
Q ss_pred --------ee-----------cCCCCCcceeeeeeeccC-CCCCCCCCC---CCCCcccceecC------CCceEEEeCC
Q psy5768 215 --------MK-----------PYGDSYLKDIKIYSKDAQ-TGTNPCGVN---NGGCAELCLYNG------VSAVCACAHG 265 (652)
Q Consensus 215 --------~~-----------~~~~~~~~~i~v~~~~~q-~~~n~C~~~---ng~Cs~lC~~~~------~~~~C~C~~G 265 (652)
+. .++ ..|++|+++|+.+| .+.|||..+ ||+|+|+|++.| .+|+|+||.|
T Consensus 226 ~~~~~V~~~~~~~g~~~~~i~~~~-~~p~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g 304 (316)
T 1ijq_A 226 IINEAIFSANRLTGSDVNLLAENL-LSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDG 304 (316)
T ss_dssp TTTTEEEEEETTTCCCCEEEECSC-SCCCCEEEESGGGSCCCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTT
T ss_pred CCCCeEEEEeCCCCcceEEEecCC-CCceEEEEeccccCCcccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCC
Confidence 11 111 36889999999998 489999998 999999999775 3799999999
Q ss_pred c-cccCCCccc
Q psy5768 266 V-VAQDGKSCS 275 (652)
Q Consensus 266 ~-l~~dg~~C~ 275 (652)
| |.+|+++|.
T Consensus 305 ~~l~~d~~~C~ 315 (316)
T 1ijq_A 305 MLLARDMRSCL 315 (316)
T ss_dssp CEECTTSSCEE
T ss_pred CEECCCCCccC
Confidence 8 778999995
No 16
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-39 Score=343.81 Aligned_cols=257 Identities=27% Similarity=0.501 Sum_probs=221.5
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
+++++. ...|+++++++.....+.. .++.|.+|++|+.+++|||+| ...++|+|++++|+..++++..+
T Consensus 89 ~l~~~~--~~~I~~i~~~~~~~~~~~~-------~~~~~~gl~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 89 VLLFAN--RIDIRQVLPHRSEYTLLLN-------NLENAIALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEEEEC--BSCEEEECTTSCCCEEEEC-------SCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCCEEEEECSS
T ss_pred eeEeec--CccceeeccCCCcEEEEec-------CCCccEEEEEecCCCeEEEEe--CCCCcEEEEecCCCCcEEEEeCC
Confidence 566664 5789999999987777764 567899999999999999999 88899999999999888888888
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
+..|. |||+||.+++|||+|...++|++++++|+.+++++..++..|++|||||.+|+||||||+..++|+|+++
T Consensus 158 -~~~p~----glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 158 -LESPG----GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp -CSCCC----CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred -CCCcc----EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 88899 9999999999999999999999999999999999988899999999999999999999986689999999
Q ss_pred CCCCcEEEEeecccCceeEEEeccCCEEEEEe----------CCCCcEEEEEecCCCCceEEE-----------------
Q psy5768 162 DGKKQTILAQEIIMPIKDITLDLKFFSAFYRN----------LSKGNIHIISLSNLSDVSTIS----------------- 214 (652)
Q Consensus 162 dg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d----------~~g~~~~~i~~~~~~~~~~~~----------------- 214 (652)
||+.++.++...+.+|+||++|+.+++|||+| ++|+.++.++......|..++
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSIN 312 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEE
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEE
Confidence 99999999988899999999999999999955 556555555432222222211
Q ss_pred -e-----------ecCCCCCcceeeeeeeccC-CCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccc
Q psy5768 215 -M-----------KPYGDSYLKDIKIYSKDAQ-TGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 215 -~-----------~~~~~~~~~~i~v~~~~~q-~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
+ ...+ ..|++|++||+.+| ...|||..+||+|+|||++.|.+|+|+||.||...|+++|.
T Consensus 313 ~~~~~~G~~~~~i~~~~-~~p~gi~v~~~~~q~~~~n~C~~~ng~C~~lCl~~~~~~~C~C~~g~~~~d~~~C~ 385 (386)
T 3v65_B 313 SANKFTGKNQEIIRNKL-HFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRKINSHACA 385 (386)
T ss_dssp EEETTTCCSCEEEECSC-SCCCCEEEESGGGSCCCCCTTTTSCTTSSSEEECCSSSCEEECCTTCBCSSSSCCB
T ss_pred EEECCCCcceEEEccCC-CCCceEEEEchhcCcCCcCccccCCCCCCceeeeCCCCCeeECCCCCcCCCCCccC
Confidence 1 1112 36889999999999 68999999999999999998889999999998777999996
No 17
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=364.85 Aligned_cols=257 Identities=27% Similarity=0.486 Sum_probs=216.4
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCC----ccEEE
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT----KRETV 77 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs----~~~~v 77 (652)
+++++. ...|+++++++.....++. .++.+.+|+||+.+++|||+| ...++|+++.++|. ..+++
T Consensus 397 ~Ll~an--~~~Ir~i~l~~~~~~~l~~-------~~~~~~gl~~d~~~~~lY~sD--~~~~~I~~~~l~g~~~~~~~~~v 465 (791)
T 3m0c_C 397 YLFFTN--RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTV 465 (791)
T ss_dssp EEEEEC--BSSEEEECTTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEE
T ss_pred cccccc--ccceeEeeccCCcceeeec-------CCCceEEEeecccCCeeEEee--ccceeEEEEeccCCCCCcceeEE
Confidence 456663 5789999999887777775 578999999999999999999 88899999999984 56777
Q ss_pred EeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5768 78 VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIA 157 (652)
Q Consensus 78 ~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~ 157 (652)
+..+ +..|. ||||||++++|||+|...++|++++++|+.+++++...+..|++|||||.+|+||||||+..++|+
T Consensus 466 i~~~-l~~P~----GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~ 540 (791)
T 3m0c_C 466 ISRD-IQAPD----GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIK 540 (791)
T ss_dssp ECSS-CSCCC----EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EecC-CCCcc----eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEE
Confidence 8777 88999 999999999999999999999999999999999999889999999999999999999999778999
Q ss_pred EEeCCCCCcEEEEeecccCceeEEEeccCCEEEEE----------eCCCCcEEEEEecC--CCCceEEE-----------
Q psy5768 158 RAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYR----------NLSKGNIHIISLSN--LSDVSTIS----------- 214 (652)
Q Consensus 158 ~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~----------d~~g~~~~~i~~~~--~~~~~~~~----------- 214 (652)
+++|+|+.+++++...+.+|+|||||+.+++|||+ +++|..+++++... ..++..++
T Consensus 541 ~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 541 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp EEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred EEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEEC
Confidence 99999999999999889999999999999999995 45666666665421 12222211
Q ss_pred ------------------eecCCCCCcceeeeeeeccC-CCCCCCCC---CCCCCcccceecCC------CceEEEeCCc
Q psy5768 215 ------------------MKPYGDSYLKDIKIYSKDAQ-TGTNPCGV---NNGGCAELCLYNGV------SAVCACAHGV 266 (652)
Q Consensus 215 ------------------~~~~~~~~~~~i~v~~~~~q-~~~n~C~~---~ng~Cs~lC~~~~~------~~~C~C~~G~ 266 (652)
+...+ ..|++|+|||+.+| ...|||.. +||+|+|||++.|. +|+|+||.||
T Consensus 621 ~~~~I~~~dk~tG~~~~~l~~~l-~~P~~i~v~h~~~Qp~~~N~C~~~~~~ng~CshlCl~~p~~~~~~~~~~C~Cp~g~ 699 (791)
T 3m0c_C 621 INEAIFSANRLTGSDVNLLAENL-LSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGM 699 (791)
T ss_dssp TTTEEEEEETTTCCCCEEEECSC-SCCCCEEEESGGGSCCCCCTTTSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTC
T ss_pred CCCEEEEEeCCCCcceEEeecCC-CCceeEeeeccccCCCCCCcccccCCCCcCcCeeecCCCCcCCCCCCceeECCCCC
Confidence 11122 36899999999999 58999987 89999999998663 6999999998
Q ss_pred -cccCCCccc
Q psy5768 267 -VAQDGKSCS 275 (652)
Q Consensus 267 -l~~dg~~C~ 275 (652)
|.+|+++|.
T Consensus 700 ~L~~d~~tC~ 709 (791)
T 3m0c_C 700 LLARDMRSCL 709 (791)
T ss_dssp EECTTSSCEE
T ss_pred EECCCCCcCC
Confidence 778999998
No 18
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=5.1e-35 Score=335.78 Aligned_cols=259 Identities=27% Similarity=0.479 Sum_probs=208.8
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC----CccEEE
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG----TKRETV 77 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg----s~~~~v 77 (652)
+++++. ...|+++++++.....++. .++.|.+|+||+.+++|||+| ...++|++++++| +..+.+
T Consensus 379 ~ll~~~--~~~I~~id~~~~~~~~~~~-------~~~~p~gla~d~~~~~Ly~sD--~~~~~I~~~~~~g~~~~~~~~~~ 447 (699)
T 1n7d_A 379 YLFFTN--RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTV 447 (699)
T ss_dssp CBCCCC--TTC-CEECTTSCCEECCSC-------CCTTCCCCEEETTTTEEEECC--TTTTSBEEEESCCCCC-CCCCCB
T ss_pred eEEecC--ccceEEEeCCCCcceeeec-------cCcceEEEccccccCeEEEEe--cCCCeEEEEecCCCCCCcceEEE
Confidence 345553 4689999999876655553 567899999999999999999 8889999999998 555666
Q ss_pred EeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5768 78 VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIA 157 (652)
Q Consensus 78 ~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~ 157 (652)
+..+ +..|. ||||||.+++|||+|...++|.+++++|+.+++++...+..|++|||||..|+||||||+..++|+
T Consensus 448 i~~~-~~~P~----glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 448 ISRD-IQAPD----GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp CCSC-C--CC----CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred EeCC-CCCcc----eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEE
Confidence 6666 77888 999999999999999999999999999999999988888999999999999999999998668999
Q ss_pred EEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEe----------CCCCcEEEEEecC--CCCc---------------
Q psy5768 158 RAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRN----------LSKGNIHIISLSN--LSDV--------------- 210 (652)
Q Consensus 158 ~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d----------~~g~~~~~i~~~~--~~~~--------------- 210 (652)
+++|+|+.+++++...+.+|+|||+|+.+++|||+| ++|.++++++... ...+
T Consensus 523 ~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 523 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp BCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS
T ss_pred EEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC
Confidence 999999999988887899999999999999999955 4555555444210 1111
Q ss_pred ---eEEEeec----------CCCCCcceeeeeeeccC-CCCCCCCCC---CCCCcccceecC------CCceEEEeCCc-
Q psy5768 211 ---STISMKP----------YGDSYLKDIKIYSKDAQ-TGTNPCGVN---NGGCAELCLYNG------VSAVCACAHGV- 266 (652)
Q Consensus 211 ---~~~~~~~----------~~~~~~~~i~v~~~~~q-~~~n~C~~~---ng~Cs~lC~~~~------~~~~C~C~~G~- 266 (652)
.+..+.+ .....|++|+|||+.+| ...|||..+ ||+|+|||++.| .+|+|+||.||
T Consensus 603 ~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~lCl~~p~~~~~~~~~~C~Cp~g~~ 682 (699)
T 1n7d_A 603 INEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGML 682 (699)
T ss_dssp TTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSCCSCCSSCSSSCSSCSCTTCCBCCCCCTTCSCSCBCCCCSSCE
T ss_pred CCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCCCCCCCccccCCCCCCCCcccCcCcccCCCCCCcEEECcCCCE
Confidence 1111111 01136889999999999 578999987 999999999754 26999999998
Q ss_pred cccCCCcccc
Q psy5768 267 VAQDGKSCSE 276 (652)
Q Consensus 267 l~~dg~~C~~ 276 (652)
|.+|+++|..
T Consensus 683 l~~d~~~C~~ 692 (699)
T 1n7d_A 683 LARDMRSCLT 692 (699)
T ss_dssp ECSSTTCEEC
T ss_pred ECCCCCccCC
Confidence 7789999984
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=100.00 E-value=2.1e-30 Score=262.98 Aligned_cols=256 Identities=23% Similarity=0.471 Sum_probs=215.1
Q ss_pred ceEEEEeeecceeEEecCCCCCCCC--CceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-ec
Q psy5768 278 DAFIMYSRVNRIDSIHMTDKSDLNS--PFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ER 354 (652)
Q Consensus 278 ~~~Ll~s~~~~i~~i~l~~~~~~~~--p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~ 354 (652)
.+||+|++...|+++++ ++..... ....+. .....+.++++|+.+++|||+|...++|++++++|...+.++ .+
T Consensus 1 ~~~l~~~~~~~I~~~~~-~g~~~~~~~~~~~~~--~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPL-ERNTMKKTEAKAFLH--IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp CEEEEEEEEEEEEEEEE-SSSCBCGGGCEEEEE--EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT
T ss_pred CcEEEEEcCCeEEEEEe-cCcccccccceeeec--CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC
Confidence 37899999999999999 5543221 011222 123678999999999999999999999999999987766666 56
Q ss_pred cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 355 ~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
+..|.+||+||.+++|||+|...++|.++++++.. .+.++ ...+..|++|++||..|+|||++++....+|++..+|
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~--~~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ--RRVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC--EEEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 67999999999999999999999999999998753 33333 3456899999999999999999987534599999999
Q ss_pred CCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEE
Q psy5768 435 GFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLR 514 (652)
Q Consensus 435 G~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~ 514 (652)
|..++++....+.+|+||++|+.+++|||+|...++|.+++++|..++.+.. ...+|++|++++++|||+|+.+++|.+
T Consensus 155 g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~P~gi~~d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 155 GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GLQYPFAVTSYGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-CCCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-CCCCceEEEEeCCEEEEEECCCCeEEE
Confidence 9998888767788999999999999999999999999999999988877766 458999999999999999999999999
Q ss_pred EEccCCceEEEEeccc-CCcceeEEEe
Q psy5768 515 ANKYTGEEVYTLRKNI-RRPMGIVAIS 540 (652)
Q Consensus 515 ~~k~~g~~~~~~~~~~-~~p~~i~~~~ 540 (652)
+++.+|+....+..+. ..|++|++..
T Consensus 234 ~d~~~g~~~~~i~~g~~~~p~gi~~~~ 260 (267)
T 1npe_A 234 MDLAISKEMDTFHPHKQTRLYGITIAL 260 (267)
T ss_dssp EETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred EeCCCCCceEEEccccccccceeeecC
Confidence 9999998888876553 5799998764
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.94 E-value=1.5e-24 Score=219.74 Aligned_cols=179 Identities=25% Similarity=0.416 Sum_probs=143.0
Q ss_pred eEEEecCCCCeEEEEecCCCeeE-----EEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEE
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQT-----TILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRET 76 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~ 76 (652)
+|++++ .+.|++++++|+... .+... ..+.|.++++|+.+++|||+| ...++|++++++|...+.
T Consensus 3 ~l~~~~--~~~I~~~~~~g~~~~~~~~~~~~~~------~~~~~~gi~~d~~~~~ly~~d--~~~~~I~~~~~~g~~~~~ 72 (267)
T 1npe_A 3 HLLFAQ--TGKIERLPLERNTMKKTEAKAFLHI------PAKVIIGLAFDCVDKVVYWTD--ISEPSIGRASLHGGEPTT 72 (267)
T ss_dssp EEEEEE--EEEEEEEEESSSCBCGGGCEEEEEE------EEEEEEEEEEETTTTEEEEEE--TTTTEEEEEESSSCCCEE
T ss_pred EEEEEc--CCeEEEEEecCcccccccceeeecC------CCCcEEEEEEecCCCEEEEEE--CCCCEEEEEecCCCCcEE
Confidence 678886 468999999997643 22221 235889999999999999999 888999999999988777
Q ss_pred EEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCC-CCe
Q psy5768 77 VVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK-IPL 155 (652)
Q Consensus 77 v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~-~~~ 155 (652)
++..+ +..|. +||+||.+++|||+|...++|.+++++|+..++++..++..|++|++||.+|+|||+|++. .++
T Consensus 73 ~~~~~-~~~p~----~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~ 147 (267)
T 1npe_A 73 IIRQD-LGSPE----GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK 147 (267)
T ss_dssp EECTT-CCCEE----EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCE
T ss_pred EEECC-CCCcc----EEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcE
Confidence 77776 78899 9999999999999999999999999999988888777778999999999999999999863 457
Q ss_pred EEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 156 IARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 156 I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
|.++.+||+....+....+..|+||++|+.+++|||++..
T Consensus 148 I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~ 187 (267)
T 1npe_A 148 IETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAG 187 (267)
T ss_dssp EEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETT
T ss_pred EEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECC
Confidence 7777777766555544445556666666555566665543
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.94 E-value=1.1e-24 Score=224.19 Aligned_cols=272 Identities=12% Similarity=0.160 Sum_probs=202.3
Q ss_pred CCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCC
Q psy5768 141 ESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGD 220 (652)
Q Consensus 141 ~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~ 220 (652)
.+++||+++......|.+.+.||+..+.+.... +.-|.+ .++.||+++...+..+..
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~---~~~i~~--~g~~Iyy~~~~~~~~~~~------------------ 80 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT---AMYINA--DKNYVYYVRNNNQKITSQ------------------ 80 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE---EEEEEE--CSSEEEEEEECC------------------------
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc---eeeEEE--cCCEEEEEECCCCccccc------------------
Confidence 488999997644578999999999988766543 455544 467888876542210000
Q ss_pred CCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCC
Q psy5768 221 SYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDL 300 (652)
Q Consensus 221 ~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~ 300 (652)
++ + .+.+..|+++++ ++.+.
T Consensus 81 --------------------------------------------~~--------------~-~~n~~~Iy~i~~-dg~~~ 100 (302)
T 3s25_A 81 --------------------------------------------TF--------------F-SYDRNSLCRIKR-NGHGS 100 (302)
T ss_dssp --------------------------------------------CC--------------S-SCCSEEEEEEET-TSCCC
T ss_pred --------------------------------------------ce--------------e-ccCCCeEEEEeC-CCCcc
Confidence 00 0 023456888888 66543
Q ss_pred CCCceeeeeccccceEEEEEEEcCCCeEEEee---cccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCC
Q psy5768 301 NSPFESIRNSTMMKNIIELSYDYKRKTLFYSD---IQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNND 377 (652)
Q Consensus 301 ~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd---~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~ 377 (652)
..+.. . .+.++.+..++|||++ .....|++++++|+..+.|..... +++||.+++|||++.+.
T Consensus 101 ----~~l~~--~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~ 166 (302)
T 3s25_A 101 ----TVLDP--D----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKN 166 (302)
T ss_dssp ----EEEEC--S----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTT
T ss_pred ----eEeec--C----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCC
Confidence 23332 1 1234555789999999 567889999999999888874321 67899999999999988
Q ss_pred CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecC
Q psy5768 378 ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQ 457 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~ 457 (652)
.+|.+++++|.. ++ .+. . .+..++++|..++|||++|+.. ++|+|+.|||+++++|.++.+ | .+|+.
T Consensus 167 ~~Iy~~~l~g~~--~~-~l~-~---~~~~~~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~ 233 (302)
T 3s25_A 167 GQLYRYDTASQS--EA-LFY-D---CNCYKPVVLDDTNVYYMDVNRD-NAIVHVNINNPNPVVLTEANI--E---HYNVY 233 (302)
T ss_dssp CCEEEEETTTTE--EE-EEE-C---SCEEEEEEEETTEEEEEEGGGT-TEEEEECSSSCCCEECSCSCE--E---EEEEE
T ss_pred ceEEEEECCCCC--EE-EEe-C---CCccceeeecCCEEEEEEcCCC-cEEEEEECCCCCeEEEeCCCc--c---eEEEC
Confidence 999999998753 33 332 2 3556778899999999999865 699999999999988876554 2 37778
Q ss_pred CCEEEEE-eCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEE
Q psy5768 458 AEKLFWG-DARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTL 526 (652)
Q Consensus 458 ~~~LYw~-D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~ 526 (652)
+++|||+ +...+.|+++++||++++.|... ...+|++++++|||+||.+++|+++. .+|+...++
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~i~i~~d~Iy~td~~~~~i~~~~-~dGs~~~~l 299 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKNDGTGFKELAKG---EFCNINVTSQYVYFTDFVSNKEYCTS-TQNPDTIKA 299 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCCEEEEES---CEEEEEECSSEEEEEETTTCCEEEEE-SSSCCSCEE
T ss_pred CCEEEEEECCCCcEEEEEECCCCccEEeeCC---ccceEEEeCCEEEEEECCCCeEEEEE-CCCCCceEe
Confidence 9999997 66778999999999999999874 35689999999999999999999986 567654443
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.82 E-value=6.9e-18 Score=173.49 Aligned_cols=264 Identities=12% Similarity=0.209 Sum_probs=185.6
Q ss_pred cCCcEEEEeC-CCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCC------------CCeEEEEeCCCC
Q psy5768 98 IAQNIYWSDP-KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK------------IPLIARAGLDGK 164 (652)
Q Consensus 98 ~~~~lY~~d~-~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~------------~~~I~~~~ldg~ 164 (652)
..+.||++.. ..+.|.+++.||+..+.|-.. .+..|.++ .++||+++... ...|.+.++||+
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~---~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND---TAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE---EEEEEEEC--SSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC---ceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 4889999974 367999999999887666543 46777665 88999997542 246777777777
Q ss_pred CcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCC
Q psy5768 165 KQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNN 244 (652)
Q Consensus 165 ~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~n 244 (652)
.+..+.... +.++.+.+++|||++.+..
T Consensus 99 ~~~~l~~~~-----~~~~s~~g~~Iy~~~~~~~----------------------------------------------- 126 (302)
T 3s25_A 99 GSTVLDPDP-----CIYASLIGNYIYYLHYDTQ----------------------------------------------- 126 (302)
T ss_dssp CCEEEECSC-----EEEEEEETTEEEEEEESSS-----------------------------------------------
T ss_pred cceEeecCC-----ccEEEEeCCEEEEEeecCC-----------------------------------------------
Confidence 766654322 3344456677777662100
Q ss_pred CCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcC
Q psy5768 245 GGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYK 324 (652)
Q Consensus 245 g~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~ 324 (652)
....|.++.+ ++++. +.|... . + .++++.
T Consensus 127 ----------------------------------------~~~~Iy~~~~-dGs~~----~~lt~~-~---~--~~~~~~ 155 (302)
T 3s25_A 127 ----------------------------------------TATSLYRIRI-DGEEK----KKIKNH-Y---L--FTCNTS 155 (302)
T ss_dssp ----------------------------------------SCEEEEEEET-TSCCC----EEEESS-C---C--CCSEEE
T ss_pred ----------------------------------------CCceEEEEEC-CCCCe----EEEeCC-C---c--eEeeEE
Confidence 0123444554 33332 122221 0 1 345777
Q ss_pred CCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCC-CeEEEEEcCCCCCccEEEEEeCCCCC
Q psy5768 325 RKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNND-ATINKIDLDSPKAQRIVVVRLGQHDK 403 (652)
Q Consensus 325 ~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~-~~I~~~~~~~~~~~~~~~~~~~~~~~ 403 (652)
.+.|||++.....|++++++|+.++.+..+ +..+++++.++.|||++... ..|.+++++|.. +.++... ..
T Consensus 156 g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~~--~~ 227 (302)
T 3s25_A 156 DRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTEA--NI 227 (302)
T ss_dssp TTEEEEECTTTCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSCS--CE
T ss_pred CCEEEEEeCCCceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeCC--Cc
Confidence 899999998788999999999888777642 33456777999999999754 589999999865 3333211 12
Q ss_pred ceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEE
Q psy5768 404 PRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIV 483 (652)
Q Consensus 404 P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~ 483 (652)
..++|..++|||++.... ..|+++++||++++.|.... ..+|...+++|||+|...+.|+++.+||+++.+
T Consensus 228 ---~~~~~~g~~Iy~~~~~~~-~~i~~~~~DG~~r~~l~~~~-----~~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~~~ 298 (302)
T 3s25_A 228 ---EHYNVYGSLIFYQRGGDN-PALCVVKNDGTGFKELAKGE-----FCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIK 298 (302)
T ss_dssp ---EEEEEETTEEEEEECSSS-CEEEEEETTSCCCEEEEESC-----EEEEEECSSEEEEEETTTCCEEEEESSSCCSCE
T ss_pred ---ceEEECCCEEEEEECCCC-cEEEEEECCCCccEEeeCCc-----cceEEEeCCEEEEEECCCCeEEEEECCCCCceE
Confidence 347888999999865433 59999999999999887642 335666799999999999999999999999887
Q ss_pred Eec
Q psy5768 484 LSK 486 (652)
Q Consensus 484 l~~ 486 (652)
++.
T Consensus 299 l~~ 301 (302)
T 3s25_A 299 ALQ 301 (302)
T ss_dssp ECC
T ss_pred ecC
Confidence 754
No 23
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=1.5e-17 Score=180.17 Aligned_cols=261 Identities=13% Similarity=0.081 Sum_probs=182.8
Q ss_pred CCCCeeEEEEEC-CCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCC----
Q psy5768 36 TLSKISSIAVWP-VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKEN---- 110 (652)
Q Consensus 36 ~~~~~~~v~~d~-~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~---- 110 (652)
.+..|.+|++|| .++.||++| .. .+|+++++++.....+.. . ...|. +||+|+..+.||++|...+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d--~~-~~I~~id~~~~~v~~~~~-~-~~~P~----~ia~d~~G~~lyvad~~~~~~~~ 205 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVG--EQ-HPTRLIDFEKEYVSTVYS-G-LSKVR----TICWTHEADSMIITNDQNNNDRP 205 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEE--BT-EEEEEEETTTTEEEEEEC-C-CSCEE----EEEECTTSSEEEEEECCSCTTSE
T ss_pred CCCCCCEEEECCCCCCeEEEEe--CC-CcEEEEECCCCEEEEEec-C-CCCcc----eEEEeCCCCEEEEEeCCCCcccc
Confidence 578999999999 689999999 55 899999999877666655 4 67788 9999997777999997432
Q ss_pred EEEEEEcCCCcE--EEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEee-cccCceeEEEeccCC
Q psy5768 111 VIEVARLTGQYR--YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-IIMPIKDITLDLKFF 187 (652)
Q Consensus 111 ~I~v~~~dg~~~--~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~-~~~~p~gl~lD~~~~ 187 (652)
.+.+.+.+|... ..+. .+..|.++++||.+|+|||+|++ ..+|.+.++++.....+... ...+|++|++|+.++
T Consensus 206 ~v~~~~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~-~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 206 NNYILTRESGFKVITELT--KGQNCNGAETHPINGELYFNSWN-AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGN 282 (430)
T ss_dssp EEEEEEGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETT-TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSS
T ss_pred eEEEEeCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECC-CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCC
Confidence 577788888764 4443 36899999999999999999997 56999999998766444433 246899999999999
Q ss_pred EEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCcc
Q psy5768 188 SAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVV 267 (652)
Q Consensus 188 ~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l 267 (652)
+|||++.....+..+-.+..... ...+..+... .. ..|+.
T Consensus 283 ~lyv~d~~~~~I~~~~~d~~~~~------------~~~~~~~ag~----------------------~g------~~g~~ 322 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSDYDWKTKR------------LTTPYIVCGQ----------------------QG------AKDWV 322 (430)
T ss_dssp EEEEEETTTTEEEEEEEETTTTE------------ECCCEEEEEC----------------------TT------CBCCB
T ss_pred EEEEEECCCCEEEEEeCCccccc------------ccceEEEecc----------------------CC------CCCCC
Confidence 99999987544433321100000 0000000000 00 00000
Q ss_pred ccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEE-EEEEEc-------CCCeEEEeecccccEE
Q psy5768 268 AQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNII-ELSYDY-------KRKTLFYSDIQKGTIN 339 (652)
Q Consensus 268 ~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~-~v~~D~-------~~~~lywsd~~~~~I~ 339 (652)
++.. ....+..|. ++.++. ..+.||++|..+++|+
T Consensus 323 ----------------------------dg~~---------~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 323 ----------------------------DGVG---------KKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp ----------------------------CEEG---------GGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred ----------------------------CCCC---------cceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEE
Confidence 0000 001223455 566653 3578999999999999
Q ss_pred EEeccCCcceEEe-e----------c-------cCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 340 SVFFNGSNHRVLL-E----------R-------QGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 340 ~~~~~g~~~~~i~-~----------~-------~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
+++.+|. ..++. . + +..|.|||+|..+++||++|..+++|.+++++
T Consensus 366 ~i~~~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 366 ILTPQGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EECTTSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 9997773 33333 2 1 34799999999889999999999999998764
No 24
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=7.7e-18 Score=182.44 Aligned_cols=203 Identities=14% Similarity=0.154 Sum_probs=160.1
Q ss_pred ccceEEEEEEEc-CCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCC----eEEEEEcC
Q psy5768 312 MMKNIIELSYDY-KRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDA----TINKIDLD 386 (652)
Q Consensus 312 ~~~~~~~v~~D~-~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~----~I~~~~~~ 386 (652)
.+.+|.+|++|+ ..+.||++|.. ++|+++++++.....+......|.+||+|+.++.||++|...+ .+.++..+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 356788999998 58999999988 8999999998766777777789999999999999999998543 45556655
Q ss_pred CCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-CCCCCceEEEecCCCEEEEEe
Q psy5768 387 SPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-DITMPNALALDHQAEKLFWGD 465 (652)
Q Consensus 387 ~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-~l~~P~glaiD~~~~~LYw~D 465 (652)
+....... + ..+..|.+||+||..|+|||+|++.. +|++..+++.....+... ...+|+||++|+.+++|||+|
T Consensus 214 g~~~~~~~-l--~~~~~p~giavdp~~g~lyv~d~~~~--~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 214 SGFKVITE-L--TKGQNCNGAETHPINGELYFNSWNAG--QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GTSCSEEE-E--EECSSCCCEEECTTTCCEEEEETTTT--EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred Cceeeeee-e--ccCCCceEEEEeCCCCEEEEEECCCC--EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 43211122 2 24789999999999999999999854 999999998765444433 346899999999999999999
Q ss_pred CCCCeEEEEecCCCc-----eEEEecC--------------CCCcee-EEEEeC---------CEEEEEcCCCCeEEEEE
Q psy5768 466 ARLDKIERCDYDGTN-----RIVLSKI--------------SPLHPF-DMAVYG---------EFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 466 ~~~~~I~~~~ldG~~-----~~~l~~~--------------~~~~p~-glav~~---------~~lYwtd~~~~~I~~~~ 516 (652)
...++|.+++++|.. ..++... .+.+|. ++++.+ +.||++|+.+++|.+++
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 999999999999852 2333321 256799 899863 59999999999999998
Q ss_pred ccCCc
Q psy5768 517 KYTGE 521 (652)
Q Consensus 517 k~~g~ 521 (652)
. +|.
T Consensus 369 ~-~G~ 372 (430)
T 3tc9_A 369 P-QGR 372 (430)
T ss_dssp T-TSE
T ss_pred C-CCc
Confidence 5 564
No 25
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.76 E-value=2.4e-16 Score=169.68 Aligned_cols=246 Identities=11% Similarity=0.056 Sum_probs=173.9
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
+..|. +||+|. .++|||+|...++|.++++++.....+... ...|. +++++..+.|||+++.....|.+.+.+
T Consensus 130 ~~~P~----~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 130 FKYMW----GIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCCEE----EEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred cCCce----EEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 55677 999994 778999999899999999998777666665 56788 999999899999998644489999887
Q ss_pred CCCcEEEE----eecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCC
Q psy5768 163 GKKQTILA----QEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTN 238 (652)
Q Consensus 163 g~~~~~~~----~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n 238 (652)
+......+ ......|+++++|+.+++||+.+.+ +..+.+ .....
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~-~~I~~~-------------d~~~~------------------ 250 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSN-KNFGRF-------------NVKTQ------------------ 250 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTT-CEEEEE-------------ETTTC------------------
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECC-CcEEEE-------------ECCCC------------------
Confidence 66543323 2135789999999989999997664 221111 00000
Q ss_pred CCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEE-
Q psy5768 239 PCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNII- 317 (652)
Q Consensus 239 ~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~- 317 (652)
...+++.. .. .+.. . .+|.
T Consensus 251 ----------------------------------------~~~~~~~~------~~-~g~~-~------------~~P~~ 270 (409)
T 3hrp_A 251 ----------------------------------------EVTLIKQL------EL-SGSL-G------------TNPGP 270 (409)
T ss_dssp ----------------------------------------CEEEEEEC------CC-CSCC-C------------CSSCC
T ss_pred ----------------------------------------CEEEEecc------cc-cCCC-C------------CCccc
Confidence 00001000 00 0100 0 1123
Q ss_pred EEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-ec--------------cCceeeeEEEccCCEEEEEeC-CCCeEE
Q psy5768 318 ELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ER--------------QGSVEGLAYEYVHNYLYWTCN-NDATIN 381 (652)
Q Consensus 318 ~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~--------------~~~~~glAvDw~~~~LYwtd~-~~~~I~ 381 (652)
++++|+..++||++|...++|++++.+|. ...+. .. +..|.|||+|..++ ||++|. ..++|.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~ 348 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEE
Confidence 78899988999999999999999999886 33333 22 46799999998765 999999 999999
Q ss_pred EEEcCCCCCccEEEEEe-------------CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 382 KIDLDSPKAQRIVVVRL-------------GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 382 ~~~~~~~~~~~~~~~~~-------------~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
++++.. +...++... ..+..|.+||++|. |.||++|++.+ +|.|..++
T Consensus 349 ~~~~~~--G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~--~Ir~i~~e 409 (409)
T 3hrp_A 349 KLDILD--GYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGK--AIRKYAVE 409 (409)
T ss_dssp EEETTT--TEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTC--EEEEEEEC
T ss_pred EEECCC--CEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCC--eEEEEEeC
Confidence 999532 112233321 12578999999996 99999999865 88887763
No 26
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.75 E-value=7.9e-17 Score=174.49 Aligned_cols=202 Identities=12% Similarity=0.114 Sum_probs=153.4
Q ss_pred ccceEEEEEEEcC--CCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCC----CeEEEEEc
Q psy5768 312 MMKNIIELSYDYK--RKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNND----ATINKIDL 385 (652)
Q Consensus 312 ~~~~~~~v~~D~~--~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~----~~I~~~~~ 385 (652)
.+..|.+|++|+. .+.|||+|.. ++|+++++.+.....+......|.+||+|+.++ ||++|... ..+..+..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4567889999984 8999999988 899999986655566667777899999999888 99999743 22444443
Q ss_pred CCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec-CCCceEEEEc-CCCCCceEEEecCCCEEEE
Q psy5768 386 DSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS-GFGTESIITT-DITMPNALALDHQAEKLFW 463 (652)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld-G~~~~~l~~~-~l~~P~glaiD~~~~~LYw 463 (652)
.+... ....+ ..+..|.+||+||..|.|||+|++.. +|+|...+ |...+.+... ...++.+|++|+.+++|||
T Consensus 215 ~~~~~-~~~~~--~~~~~P~giavd~~~G~lyv~d~~~~--~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 215 ASGFT-ERLSL--CNARGAKTCAVHPQNGKIYYTRYHHA--MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp GGTTC-CEEEE--EECSSBCCCEECTTTCCEEECBTTCS--EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred CCCee-ccccc--cccCCCCEEEEeCCCCeEEEEECCCC--EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 32211 11222 25789999999999999999998754 89999998 5432444432 3456778999999999999
Q ss_pred EeCCCCeEEEEecCCCc-----eEEEecC--------------CCCceeEEEE---------e-CCEEEEEcCCCCeEEE
Q psy5768 464 GDARLDKIERCDYDGTN-----RIVLSKI--------------SPLHPFDMAV---------Y-GEFIFWTDWVIHAVLR 514 (652)
Q Consensus 464 ~D~~~~~I~~~~ldG~~-----~~~l~~~--------------~~~~p~glav---------~-~~~lYwtd~~~~~I~~ 514 (652)
+|...++|.++++++.. +.++... .+.+|.+|++ . ++.||++|+.+++|.+
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 99999999999998632 2333321 2568999999 5 5699999999999999
Q ss_pred EEccCCc
Q psy5768 515 ANKYTGE 521 (652)
Q Consensus 515 ~~k~~g~ 521 (652)
+++ +|.
T Consensus 370 ~~~-~G~ 375 (433)
T 4hw6_A 370 LTP-EGR 375 (433)
T ss_dssp ECT-TSE
T ss_pred ECC-CCC
Confidence 986 563
No 27
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=9.5e-16 Score=164.98 Aligned_cols=204 Identities=13% Similarity=0.069 Sum_probs=157.5
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCC-eEEEEEcCCCCC
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDA-TINKIDLDSPKA 390 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~-~I~~~~~~~~~~ 390 (652)
.+.++.+|++|. +++|||+|...++|+++++++.....+......|. +|+|+.++.|||++...+ +|.+++..+...
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 456789999995 56799999998999999998766666665566777 999999999999998655 899998765321
Q ss_pred ccEEEEEe-C-CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE---c-CC-CCCc-eEEEecCCCEEE
Q psy5768 391 QRIVVVRL-G-QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT---T-DI-TMPN-ALALDHQAEKLF 462 (652)
Q Consensus 391 ~~~~~~~~-~-~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~---~-~l-~~P~-glaiD~~~~~LY 462 (652)
...+-.. . ....|.+||++|..|.||+++.. .+|++..+++.....+.. . .. ..|. +|++|+.+++||
T Consensus 207 -~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~---~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 207 -PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSN---KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp -EEEEEECCTTSCSCCCBCEECTTSSEEEEECTT---CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred -eEEeeeccchhcCCcEEEEEeCCCCeEEEEECC---CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 1121111 2 56889999999999999998763 389999998776444421 1 11 1256 999999889999
Q ss_pred EEeCCCCeEEEEecCCCceEEEecCC--------------CCceeEEEEe-CCEEEEEcC-CCCeEEEEEccCCce
Q psy5768 463 WGDARLDKIERCDYDGTNRIVLSKIS--------------PLHPFDMAVY-GEFIFWTDW-VIHAVLRANKYTGEE 522 (652)
Q Consensus 463 w~D~~~~~I~~~~ldG~~~~~l~~~~--------------~~~p~glav~-~~~lYwtd~-~~~~I~~~~k~~g~~ 522 (652)
++|...++|.+++++|.- .++.... +..|.+|+++ ++.||++|+ .+++|.+++..+|..
T Consensus 283 v~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 999999999999999973 3333322 5679999998 457999999 999999999666653
No 28
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=1.5e-14 Score=147.15 Aligned_cols=280 Identities=15% Similarity=0.191 Sum_probs=192.3
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
...|. +|++|. .++||+++...+.|.+.+++|+.....+......|.+|++|+ +|.||+++.+ ...|.+.+.+
T Consensus 19 ~~~p~----~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~v~~~d~~ 91 (300)
T 2qc5_A 19 DSGPY----GITSSE-DGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENG-ANKIGKLSKK 91 (300)
T ss_dssp TCCEE----EEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETT-TTEEEEECTT
T ss_pred CCCcc----eeeECC-CCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECC-CCCEEEEecC-CCeEEEECCC
Confidence 56678 999996 578999998889999999997665544444467899999997 7899999874 4589998888
Q ss_pred CCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCC
Q psy5768 163 GKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGV 242 (652)
Q Consensus 163 g~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~ 242 (652)
|+............|.+|++|. +++||+.+..++....+ .+
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~-------------~~------------------------- 132 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKL-------------TA------------------------- 132 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEE-------------CT-------------------------
T ss_pred CCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEE-------------CC-------------------------
Confidence 6543222222346789999995 56788877643321111 00
Q ss_pred CCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEE
Q psy5768 243 NNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYD 322 (652)
Q Consensus 243 ~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D 322 (652)
++ .+..+.+ .. ....+.++++|
T Consensus 133 ---------------------------~g----------------~~~~~~~-~~--------------~~~~~~~i~~d 154 (300)
T 2qc5_A 133 ---------------------------DG----------------TIYEYDL-PN--------------KGSYPAFITLG 154 (300)
T ss_dssp ---------------------------TS----------------CEEEEEC-SS--------------TTCCEEEEEEC
T ss_pred ---------------------------CC----------------CEEEccC-CC--------------CCCCceeEEEC
Confidence 00 0011111 00 11235677888
Q ss_pred cCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCC
Q psy5768 323 YKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQH 401 (652)
Q Consensus 323 ~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~ 401 (652)
.. ++||+++...+.|++++.+|....... .....|.+|++|. .++||+++...+.|.+++.++. ..........
T Consensus 155 ~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~~~ 229 (300)
T 2qc5_A 155 SD-NALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGE---ISEYDIPTPN 229 (300)
T ss_dssp TT-SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCC---EEEEECSSTT
T ss_pred CC-CCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCc---EEEEECCCCC
Confidence 75 459999988889999988665433222 3456899999997 5689999998889999987442 2222222346
Q ss_pred CCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecC
Q psy5768 402 DKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD 477 (652)
Q Consensus 402 ~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld 477 (652)
..|.+|++|+. |.||+++.+.. .|.+.+.+|......+......|.+|++|.. ++||+++. . .|.+++.+
T Consensus 230 ~~~~~i~~d~~-g~l~v~~~~~~--~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 230 ARPHAITAGKN-SEIWFTEWGAN--QIGRITNDNTIQEYQLQTENAEPHGITFGKD-GSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCEEEEEECST-TCEEEEETTTT--EEEEECTTSCEEEEECCSTTCCCCCEEECTT-SCEEEECS-S-EEEEEEEC
T ss_pred CCceEEEECCC-CCEEEeccCCC--eEEEECCCCcEEEEECCccCCccceeEeCCC-CCEEEEcc-C-ceEEeCCC
Confidence 78999999995 78999997643 8999888764332222334568999999976 67999987 5 88887653
No 29
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=2e-14 Score=146.17 Aligned_cols=279 Identities=15% Similarity=0.175 Sum_probs=193.5
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVA 115 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~ 115 (652)
....|.+|++|+. ++||+++ ...+.|.+++.+|......+... ...|. +|++|. .++||+++...+.|.+.
T Consensus 18 ~~~~p~~i~~d~~-g~l~v~~--~~~~~v~~~~~~~~~~~~~~~~~-~~~~~----~i~~~~-~g~l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 18 PDSGPYGITSSED-GKVWFTQ--HKANKISSLDQSGRIKEFEVPTP-DAKVM----CLIVSS-LGDIWFTENGANKIGKL 88 (300)
T ss_dssp TTCCEEEEEECTT-SCEEEEE--TTTTEEEEECTTSCEEEEECSST-TCCEE----EEEECT-TSCEEEEETTTTEEEEE
T ss_pred CCCCcceeeECCC-CCEEEEc--CCCCeEEEECCCCceEEEECCCC-CCcce----eEEECC-CCCEEEEecCCCeEEEE
Confidence 4679999999964 7899999 77889999998855433222333 46677 999994 67899999888999999
Q ss_pred EcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 116 RLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 116 ~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
+.+|+............|.+|++|+ +|.||+++.+ ...|.+.+.+|+............|.+|++|..+ +||+.+..
T Consensus 89 d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~ 165 (300)
T 2qc5_A 89 SKKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLN-GDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDN-ALWFTENQ 165 (300)
T ss_dssp CTTSCEEEEECSSTTCCEEEEEECS-TTCEEEEETT-TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTS-SEEEEETT
T ss_pred CCCCCeEEecCCCCCCCCccceECC-CCCEEEEccC-CCeEEEECCCCCEEEccCCCCCCCceeEEECCCC-CEEEEecC
Confidence 9997765444333457899999997 7899999875 4589999888654432222235689999999754 48887765
Q ss_pred CCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccc
Q psy5768 196 KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 196 g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
++....+ +. ++
T Consensus 166 ~~~i~~~---------------------------~~--------------------------------------~g---- 176 (300)
T 2qc5_A 166 NNSIGRI---------------------------TN--------------------------------------TG---- 176 (300)
T ss_dssp TTEEEEE---------------------------CT--------------------------------------TC----
T ss_pred CCeEEEE---------------------------CC--------------------------------------CC----
Confidence 3322111 00 00
Q ss_pred ccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-ec
Q psy5768 276 EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ER 354 (652)
Q Consensus 276 ~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~ 354 (652)
.+..+.+ . .....+.++++|. ++.||+++...+.|++++.+|....... ..
T Consensus 177 ------------~~~~~~~-~--------------~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 228 (300)
T 2qc5_A 177 ------------KLEEYPL-P--------------TNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGEISEYDIPTP 228 (300)
T ss_dssp ------------CEEEEEC-S--------------STTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSST
T ss_pred ------------cEEEeeC-C--------------CCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCcEEEEECCCC
Confidence 0001111 0 0112356788887 4689999988888999998665433323 35
Q ss_pred cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEe-CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEee
Q psy5768 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRL-GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFF 433 (652)
Q Consensus 355 ~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~-~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~l 433 (652)
...|.+|++|..+ +||+++...+.|.+++.++. ...... .....|.+|++++ .|.||++++ . .|.+...
T Consensus 229 ~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~---~-~i~~~~p 298 (300)
T 2qc5_A 229 NARPHAITAGKNS-EIWFTEWGANQIGRITNDNT----IQEYQLQTENAEPHGITFGK-DGSVWFALK---C-KIGKLNL 298 (300)
T ss_dssp TCCEEEEEECSTT-CEEEEETTTTEEEEECTTSC----EEEEECCSTTCCCCCEEECT-TSCEEEECS---S-EEEEEEE
T ss_pred CCCceEEEECCCC-CEEEeccCCCeEEEECCCCc----EEEEECCccCCccceeEeCC-CCCEEEEcc---C-ceEEeCC
Confidence 6689999999874 59999988899999987542 222322 2457899999999 588999986 2 6666554
No 30
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.72 E-value=1.9e-15 Score=163.61 Aligned_cols=227 Identities=12% Similarity=0.090 Sum_probs=165.3
Q ss_pred eEEEEeee-cceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeeccc----ccEEEEeccCCcc-eEEe
Q psy5768 279 AFIMYSRV-NRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQK----GTINSVFFNGSNH-RVLL 352 (652)
Q Consensus 279 ~~Ll~s~~-~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~----~~I~~~~~~g~~~-~~i~ 352 (652)
..|+++.. ..|+++++.++ .. ..+ ...+..+.+|++|...+ ||++|... ..+..+...+... ...+
T Consensus 153 g~Lyv~D~~~~I~~id~~~g-~v----~~~--~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~ 224 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQ-YV----DIK--TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSL 224 (433)
T ss_dssp CEEEEECBTSCEEEEETTTT-EE----EEE--CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEE
T ss_pred CEEEEEeCCCCEEEEECCCC-EE----EEe--ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccc
Confidence 56777765 78999987322 21 122 12456789999999887 99999743 2355555544332 2333
Q ss_pred eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc-EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEE
Q psy5768 353 ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR-IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRA 431 (652)
Q Consensus 353 ~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~-~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~ 431 (652)
..+..|.|||+|+..++|||+|...++|.+++.+... . ..+........+.+||++|..++|||+|.+.+ +|.+.
T Consensus 225 ~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~--~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~--~I~~~ 300 (433)
T 4hw6_A 225 CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT--LTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH--CIYRV 300 (433)
T ss_dssp EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC--EEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT--EEEEE
T ss_pred cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe--EEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC--EEEEE
Confidence 4677999999999899999999999999999976321 2 34444444456778999998888999998865 99999
Q ss_pred eecCCCc-----eEEEEc--------------CCCCCceEEE--------ecCCCEEEEEeCCCCeEEEEecCCCceEEE
Q psy5768 432 FFSGFGT-----ESIITT--------------DITMPNALAL--------DHQAEKLFWGDARLDKIERCDYDGTNRIVL 484 (652)
Q Consensus 432 ~ldG~~~-----~~l~~~--------------~l~~P~glai--------D~~~~~LYw~D~~~~~I~~~~ldG~~~~~l 484 (652)
.+|+... .++... .+.+|.||++ |...++||++|...++|.+++.+|.-....
T Consensus 301 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G~v~t~~ 380 (433)
T 4hw6_A 301 DYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEGRVTTYA 380 (433)
T ss_dssp EBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTSEEEEEE
T ss_pred eCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCCCEEEEE
Confidence 9886432 334332 3568999999 236789999999999999999988433332
Q ss_pred ecC----------------CCCceeEEEEe--CCEEEEEcCCCCeEEEEEc
Q psy5768 485 SKI----------------SPLHPFDMAVY--GEFIFWTDWVIHAVLRANK 517 (652)
Q Consensus 485 ~~~----------------~~~~p~glav~--~~~lYwtd~~~~~I~~~~k 517 (652)
... .+.+|.||+++ ++.||++|+.+++|.++++
T Consensus 381 G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 381 GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 110 15679999999 6899999999999998875
No 31
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=7.4e-15 Score=153.07 Aligned_cols=157 Identities=15% Similarity=0.088 Sum_probs=122.6
Q ss_pred CCCCCCeeEEEEECCCCEEEEEeccCCc------------------------ceEEEEEcC-CCccEEEEeCCCcCCccC
Q psy5768 34 TSTLSKISSIAVWPVKGKMFWSNVTKQV------------------------VTIEMAFMD-GTKRETVVSQKKYPAVTA 88 (652)
Q Consensus 34 ~~~~~~~~~v~~d~~~~~lyw~d~~~~~------------------------~~I~~~~~d-gs~~~~v~~~~~~~~p~~ 88 (652)
...+..|.+|++|+. ++||+++ ..+ ++|++++.+ |.......... +..|.
T Consensus 20 ~~~l~~v~~va~d~~-G~l~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~p~- 94 (329)
T 3fvz_A 20 YLLPGQVSGVALDSK-NNLVIFH--RGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-FYLPH- 94 (329)
T ss_dssp GCCCSCEEEEEECTT-CCEEEEE--CTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT-CSSEE-
T ss_pred ceecCCceEEEECCC-CCEEEEe--CCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc-cCCce-
Confidence 347889999999975 7899999 655 368899886 55433332233 67788
Q ss_pred CCCcEEEEccCCcEEEEeCCCCEEEEEEcCCC--cEEEEE--------eCCCCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5768 89 CNLHIAVDWIAQNIYWSDPKENVIEVARLTGQ--YRYVLI--------SGGVDQPSALAVDPESGYLFWSESGKIPLIAR 158 (652)
Q Consensus 89 ~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~--~~~~l~--------~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~ 158 (652)
+||+|. .++||++|...++|.+.+++|. ....+. ...+..|.+|++||.+|.||++|.....+|.+
T Consensus 95 ---gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 95 ---GLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp ---EEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE
T ss_pred ---EEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE
Confidence 999996 6679999999999999999998 444443 23466899999999899999999623679999
Q ss_pred EeCCCCCcEEEEee---------cccCceeEEEeccCCEEEEEeCCCCcE
Q psy5768 159 AGLDGKKQTILAQE---------IIMPIKDITLDLKFFSAFYRNLSKGNI 199 (652)
Q Consensus 159 ~~ldg~~~~~~~~~---------~~~~p~gl~lD~~~~~ly~~d~~g~~~ 199 (652)
.+.+|.....+... .+..|.||++|+.+++||++|...+.+
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 99999877666432 256799999999889999999874433
No 32
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.1e-14 Score=157.89 Aligned_cols=266 Identities=14% Similarity=0.119 Sum_probs=181.6
Q ss_pred CCCCeeEEEEEC-CCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC--CcCCccCCCCcEEE-------EccCCcEEEE
Q psy5768 36 TLSKISSIAVWP-VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK--KYPAVTACNLHIAV-------DWIAQNIYWS 105 (652)
Q Consensus 36 ~~~~~~~v~~d~-~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~--~~~~p~~~~~~lav-------Dw~~~~lY~~ 105 (652)
.+..|.+|++|| .+++||+++ ....+|+++++.+....+++..+ .+..|. +||+ |...+.||++
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~--~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~----~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICY--DGHKAIQLIDLKNRMLSSPLNINTIPTNRIR----SIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEE--ETEEEEEEEETTTTEEEEEECCTTSSCSBEE----EEEECCCBTTTBCTTCEEEEE
T ss_pred ccCCCCEEEEccCCCCEEEEEE--CCCCeEEEEECCCCEEEEEEccCccccCCCc----EEEEeecccccCCCCCEEEEE
Confidence 467899999999 589999999 77789999999988888887654 145678 9999 9877779999
Q ss_pred eCCC------CEEEEEEcC--CCcE-----EEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC--------CC
Q psy5768 106 DPKE------NVIEVARLT--GQYR-----YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD--------GK 164 (652)
Q Consensus 106 d~~~------~~I~v~~~d--g~~~-----~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld--------g~ 164 (652)
|... ..|.+++.+ |... ..+. .+.+|.++++||.+|+||+++++ ...|.+.+++ |.
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~-~g~V~r~d~~~~~~~~~tg~ 287 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYE-KGQVFRLDLVDYFKTIKNGG 287 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETT-TTEEEEECHHHHHHHHHTTC
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECC-CCEEEEEecccccccccCce
Confidence 9765 237777433 4543 3333 35799999999999999999996 5689999987 33
Q ss_pred C-----------cEEEEee-cccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeec
Q psy5768 165 K-----------QTILAQE-IIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKD 232 (652)
Q Consensus 165 ~-----------~~~~~~~-~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~ 232 (652)
. ...++.. .-.+|.+|++|+.++.||++|.....++.+-.+.... .+ ....++-..
T Consensus 288 ~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~-~~-----------~~~~~~aG~ 355 (496)
T 3kya_A 288 SWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK-EF-----------ITPYNFVGG 355 (496)
T ss_dssp CCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT-EE-----------CCCEEEEEB
T ss_pred eecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc-ee-----------cccEEecCC
Confidence 2 1123322 2468999999999999999998744444332211000 00 000000000
Q ss_pred cCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccc
Q psy5768 233 AQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTM 312 (652)
Q Consensus 233 ~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~ 312 (652)
.+ ..|+ .|+... ...
T Consensus 356 ---------------------~g-------~~G~----------------------------~DG~~~---------~a~ 370 (496)
T 3kya_A 356 ---------------------YK-------QSGY----------------------------RDDVGT---------EAR 370 (496)
T ss_dssp ---------------------TT-------BCCC----------------------------BCCBGG---------GCB
T ss_pred ---------------------CC-------CCcc----------------------------cCCccc---------ccc
Confidence 00 0000 011000 022
Q ss_pred cceEE-EEEEEc------CCCeEEEeecccccEEEEeccCCcceEEe-e-----------------------ccCceeee
Q psy5768 313 MKNII-ELSYDY------KRKTLFYSDIQKGTINSVFFNGSNHRVLL-E-----------------------RQGSVEGL 361 (652)
Q Consensus 313 ~~~~~-~v~~D~------~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~-----------------------~~~~~~gl 361 (652)
|..|. ++..|. ..+.||++|..+++|+++..+|. ..++. . .+..|.||
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gI 449 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGL 449 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEE
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEE
Confidence 34456 555653 56789999999999999998773 34443 2 13579999
Q ss_pred EEEccCCEEEEEeCCCCeEEEEEcCCC
Q psy5768 362 AYEYVHNYLYWTCNNDATINKIDLDSP 388 (652)
Q Consensus 362 AvDw~~~~LYwtd~~~~~I~~~~~~~~ 388 (652)
|+|..+++||++|..+++|+++++++.
T Consensus 450 avd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 450 VYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred EEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 999888999999999999999998764
No 33
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=8.8e-14 Score=141.29 Aligned_cols=288 Identities=16% Similarity=0.165 Sum_probs=189.6
Q ss_pred EEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEE
Q psy5768 124 VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIIS 203 (652)
Q Consensus 124 ~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~ 203 (652)
.-+......|++|++|+ +|.||+++.. ...|.+.+.+|.............|.+|++|. +++||+.+..++....+
T Consensus 8 ~~~~~~~~~~~~i~~d~-~g~l~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~- 83 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSD-KGKVWITQHK-ANMISCINLDGKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRI- 83 (299)
T ss_dssp EECCSSSCCEEEEEECT-TSCEEEEETT-TTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEE-
T ss_pred EcCCCcCCCccceEECC-CCCEEEEecC-CCcEEEEcCCCCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEE-
Confidence 33444567899999998 6899999864 45888888884432222222346789999986 46677776542221111
Q ss_pred ecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEE
Q psy5768 204 LSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMY 283 (652)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~ 283 (652)
+. ++
T Consensus 84 --------------------------~~--------------------------------------~g------------ 87 (299)
T 2z2n_A 84 --------------------------TK--------------------------------------KG------------ 87 (299)
T ss_dssp --------------------------CT--------------------------------------TS------------
T ss_pred --------------------------CC--------------------------------------CC------------
Confidence 00 00
Q ss_pred eeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeE
Q psy5768 284 SRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLA 362 (652)
Q Consensus 284 s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glA 362 (652)
.+..+.+ .. ....+.++++|. +++||+++...+.|++++.+|....... .....|.+|+
T Consensus 88 ----~~~~~~~-~~--------------~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~ 147 (299)
T 2z2n_A 88 ----IIKEYTL-PN--------------PDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFIT 147 (299)
T ss_dssp ----CEEEEEC-SS--------------TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEE
T ss_pred ----cEEEEeC-CC--------------cCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEE
Confidence 0011111 00 012356777885 5689999887888999988654433322 3456799999
Q ss_pred EEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE
Q psy5768 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII 442 (652)
Q Consensus 363 vDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~ 442 (652)
+|.. ++||+++...+.|.+++.++. ............|.+|++++. |.||+++.... .|.+...+|.......
T Consensus 148 ~~~~-g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~--~i~~~~~~g~~~~~~~ 220 (299)
T 2z2n_A 148 LGSD-NALWFTENQNNAIGRITESGD---ITEFKIPTPASGPVGITKGND-DALWFVEIIGN--KIGRITTSGEITEFKI 220 (299)
T ss_dssp ECTT-SCEEEEETTTTEEEEECTTCC---EEEEECSSTTCCEEEEEECTT-SSEEEEETTTT--EEEEECTTCCEEEEEC
T ss_pred EcCC-CCEEEEeCCCCEEEEEcCCCc---EEEeeCCCCCCcceeEEECCC-CCEEEEccCCc--eEEEECCCCcEEEEEC
Confidence 9975 589999988889999987432 222212234678999999994 78999997643 8888888554322112
Q ss_pred EcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCC
Q psy5768 443 TTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTG 520 (652)
Q Consensus 443 ~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g 520 (652)
......|.+|++|.. ++||+++...+.|..++.+|.-+..........|.+|++.++.||+++. .+.|.+++..++
T Consensus 221 ~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 221 PTPNARPHAITAGAG-IDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp SSTTCCEEEEEECST-TCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred CCCCCCceeEEECCC-CCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 223567999999976 5699999888999999997743333233335789999995579999986 678888886543
No 34
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=2.1e-14 Score=155.77 Aligned_cols=233 Identities=11% Similarity=0.129 Sum_probs=169.8
Q ss_pred eEEEEeee--cceeEEecCCCCCCCCCceeeeec-cccceEEEEEE-------EcCCCeEEEeecccc------cEEEEe
Q psy5768 279 AFIMYSRV--NRIDSIHMTDKSDLNSPFESIRNS-TMMKNIIELSY-------DYKRKTLFYSDIQKG------TINSVF 342 (652)
Q Consensus 279 ~~Ll~s~~--~~i~~i~l~~~~~~~~p~~~~~~~-~~~~~~~~v~~-------D~~~~~lywsd~~~~------~I~~~~ 342 (652)
..|+++.. ..|++|++ ....+. ..+... ..+..+.++++ |...++||++|...+ .|+.+.
T Consensus 152 ~~Lyv~~~~~~~i~~ID~-~~~~v~---~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~ 227 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDL-KNRMLS---SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIK 227 (496)
T ss_dssp EEEEEEEETEEEEEEEET-TTTEEE---EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEC-CCCEEE---EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEe
Confidence 44555543 57888887 332222 122211 13456899999 998889999998752 377775
Q ss_pred cc--CCcce----EEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcC-------CCCC----------ccEEEEEeC
Q psy5768 343 FN--GSNHR----VLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLD-------SPKA----------QRIVVVRLG 399 (652)
Q Consensus 343 ~~--g~~~~----~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~-------~~~~----------~~~~~~~~~ 399 (652)
.. |.... ..+.....|.|+|+|+..+.||+++...++|.+++++ +... ..+.+....
T Consensus 228 r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~ 307 (496)
T 3kya_A 228 RNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA 307 (496)
T ss_dssp CCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS
T ss_pred cCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC
Confidence 33 33321 2334566899999999999999999999999999986 3221 012445555
Q ss_pred CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCc-----eEEEEc--------------CCCCCc-eEEEec---
Q psy5768 400 QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGT-----ESIITT--------------DITMPN-ALALDH--- 456 (652)
Q Consensus 400 ~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~-----~~l~~~--------------~l~~P~-glaiD~--- 456 (652)
....|++||++|...+||++|++.+ +|.|..+||... .++... .+..|. |+++|.
T Consensus 308 ~~~~p~~ia~~p~G~~lYvaD~~~h--~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~ 385 (496)
T 3kya_A 308 DPSWEFQIFIHPTGKYAYFGVINNH--YFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDY 385 (496)
T ss_dssp SSSCCEEEEECTTSSEEEEEETTTT--EEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTC
T ss_pred CCCCceEEEEcCCCCEEEEEeCCCC--EEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccc
Confidence 5678999999998888999998865 999999998753 344432 356799 888873
Q ss_pred ---CCCEEEEEeCCCCeEEEEecCCCceEEEecC-----------------------CCCceeEEEEeC--CEEEEEcCC
Q psy5768 457 ---QAEKLFWGDARLDKIERCDYDGTNRIVLSKI-----------------------SPLHPFDMAVYG--EFIFWTDWV 508 (652)
Q Consensus 457 ---~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~-----------------------~~~~p~glav~~--~~lYwtd~~ 508 (652)
..+.||++|...++|.+++.+|. ..++... .+.+|.||+++. +.||++|..
T Consensus 386 ~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 386 TGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp CSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETT
T ss_pred cccCCCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCC
Confidence 56899999999999999998884 4444321 157899999995 799999999
Q ss_pred CCeEEEEEcc
Q psy5768 509 IHAVLRANKY 518 (652)
Q Consensus 509 ~~~I~~~~k~ 518 (652)
+++|.+++..
T Consensus 465 N~rIrki~~~ 474 (496)
T 3kya_A 465 GHTIRTISME 474 (496)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEECC
Confidence 9999999874
No 35
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=9.4e-14 Score=141.09 Aligned_cols=281 Identities=15% Similarity=0.187 Sum_probs=188.3
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
...|. +|++|. .++||+++...+.|.+.+++|.............|.+|++|+ +|.||+++.+ ...|.+.+.+
T Consensus 14 ~~~~~----~i~~d~-~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~ 86 (299)
T 2z2n_A 14 DTGPY----GITVSD-KGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISS-DGEVWFTENA-ANKIGRITKK 86 (299)
T ss_dssp SCCEE----EEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETT-TTEEEEECTT
T ss_pred CCCcc----ceEECC-CCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECC-CCCEEEeCCC-CCeEEEECCC
Confidence 45677 999996 678999998788999999996655444333457899999998 7899999864 4579998888
Q ss_pred CCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCC
Q psy5768 163 GKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGV 242 (652)
Q Consensus 163 g~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~ 242 (652)
|+............|.+|++|. +++||+.+..++....+ .+
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~-------------d~------------------------- 127 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRI-------------TD------------------------- 127 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEE-------------CT-------------------------
T ss_pred CcEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEE-------------CC-------------------------
Confidence 6532222222356799999986 56788876653322111 00
Q ss_pred CCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEE
Q psy5768 243 NNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYD 322 (652)
Q Consensus 243 ~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D 322 (652)
++ .+..+.+ .. ....+.++++|
T Consensus 128 ---------------------------~g----------------~~~~~~~-~~--------------~~~~~~~i~~~ 149 (299)
T 2z2n_A 128 ---------------------------DG----------------KIREYEL-PN--------------KGSYPSFITLG 149 (299)
T ss_dssp ---------------------------TC----------------CEEEEEC-SS--------------TTCCEEEEEEC
T ss_pred ---------------------------CC----------------CEEEecC-CC--------------CCCCCceEEEc
Confidence 00 0001111 00 01234567777
Q ss_pred cCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCC
Q psy5768 323 YKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQH 401 (652)
Q Consensus 323 ~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~ 401 (652)
.. ++||+++...+.|++++.+|....... .....|.+|++|.. ++||+++...+.|.+++.++. ..........
T Consensus 150 ~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~~~ 224 (299)
T 2z2n_A 150 SD-NALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITTSGE---ITEFKIPTPN 224 (299)
T ss_dssp TT-SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCC---EEEEECSSTT
T ss_pred CC-CCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECCCCc---EEEEECCCCC
Confidence 54 579998887788999988554332212 34567999999976 569999988889999987432 2222122245
Q ss_pred CCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCC
Q psy5768 402 DKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDG 478 (652)
Q Consensus 402 ~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG 478 (652)
..|.+|++++. |.||+++++.. .|.+...+|......+......|.+|++ ..++||+++. .+.|.+++.+.
T Consensus 225 ~~~~~i~~~~~-g~l~v~~~~~~--~i~~~d~~g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 225 ARPHAITAGAG-IDLWFTEWGAN--KIGRLTSNNIIEEYPIQIKSAEPHGICF--DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp CCEEEEEECST-TCEEEEETTTT--EEEEEETTTEEEEEECSSSSCCEEEEEE--CSSCEEEEET-TTEEEEEEEC-
T ss_pred CCceeEEECCC-CCEEEeccCCc--eEEEECCCCceEEEeCCCCCCccceEEe--cCCCEEEEec-CCcEEEEEcCc
Confidence 78999999995 78999997643 8988888663222212233567999999 6789999986 57888887764
No 36
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=3e-14 Score=148.44 Aligned_cols=223 Identities=17% Similarity=0.134 Sum_probs=159.1
Q ss_pred ccceEEEEEEEcCCCeEEEeeccc------------------------ccEEEEecc-CCcceEEe-eccCceeeeEEEc
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQK------------------------GTINSVFFN-GSNHRVLL-ERQGSVEGLAYEY 365 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~------------------------~~I~~~~~~-g~~~~~i~-~~~~~~~glAvDw 365 (652)
.+..+.+|++|+. ++||+++... ++|++++.+ |....... ..+..|.|||+|.
T Consensus 22 ~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 4577899999986 6899998866 368888875 43322222 3456899999997
Q ss_pred cCCEEEEEeCCCCeEEEEEcCCCCCccEEEEE-------eCCCCCceEEEEeCCCCEEEEEec-CCCCCceEEEeecCCC
Q psy5768 366 VHNYLYWTCNNDATINKIDLDSPKAQRIVVVR-------LGQHDKPRGIDIDSCDSRIYWTNW-NSHLPSIQRAFFSGFG 437 (652)
Q Consensus 366 ~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~-------~~~~~~P~~Iavdp~~g~Lywtd~-~~~~~~I~r~~ldG~~ 437 (652)
.++ ||++|...++|.+++.++.......+-. ...+..|.+||++|..|.||++|. +.. +|.+...+|..
T Consensus 101 ~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~--~I~~~~~~g~~ 177 (329)
T 3fvz_A 101 DGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS--RIVQFSPSGKF 177 (329)
T ss_dssp TSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC--EEEEECTTSCE
T ss_pred CCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC--eEEEEcCCCCE
Confidence 555 9999999999999998764211122111 134568999999998899999995 543 89999988876
Q ss_pred ceEEEEc---------CCCCCceEEEecCCCEEEEEeCCCCeEEEEecC-CCceEEEecCC-CCceeEEEEeCCE-----
Q psy5768 438 TESIITT---------DITMPNALALDHQAEKLFWGDARLDKIERCDYD-GTNRIVLSKIS-PLHPFDMAVYGEF----- 501 (652)
Q Consensus 438 ~~~l~~~---------~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld-G~~~~~l~~~~-~~~p~glav~~~~----- 501 (652)
...+... .+..|.||++|+.+++||++|...++|..++.+ |.....+.... ...|+++++..+.
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 5555422 345699999998889999999999999999998 77666664322 3467776665544
Q ss_pred --EEEEcCCCCeEEEEEccCCceEEEEe---cccCCcceeEE
Q psy5768 502 --IFWTDWVIHAVLRANKYTGEEVYTLR---KNIRRPMGIVA 538 (652)
Q Consensus 502 --lYwtd~~~~~I~~~~k~~g~~~~~~~---~~~~~p~~i~~ 538 (652)
+|+++.....|+.++..+|+....+. ..+..|.+|++
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~ 299 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA 299 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE
Confidence 44455566688888877887666653 23344555544
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=1.1e-14 Score=146.19 Aligned_cols=195 Identities=16% Similarity=0.257 Sum_probs=145.0
Q ss_pred eEEEEEEEcCCCeEEE-eecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 315 NIIELSYDYKRKTLFY-SDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 315 ~~~~v~~D~~~~~lyw-sd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
.+.++++|... +||+ ++...+.|.+++.++.....+. .....|.+|++|..+ +||+++. .+.|.+++.++..
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~--- 98 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNN--- 98 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSC---
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCce---
Confidence 78999999754 6999 8888899999987654433332 455689999999865 5999998 7899999876642
Q ss_pred EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE-EcCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII-TTDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 393 ~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~-~~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
...+.......|.+|+++| .|.||+++.+.. .|.+... |+...... ...+..|.+|++|..+ +||+++...+.|
T Consensus 99 ~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~--~i~~~~~-~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i 173 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDT-QGAVYVADRGNN--RVVKLAA-GSKTQTVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRV 173 (270)
T ss_dssp CEECCCCSCSSEEEEEECT-TCCEEEEEGGGT--EEEEECT-TCCSCEECCCCSCCSCCCEEECTTC-CEEEEEGGGTEE
T ss_pred EeeeecCCcCCCcceEECC-CCCEEEEECCCC--EEEEEEC-CCceeEeeccccCCCceeEEEeCCC-CEEEEECCCCEE
Confidence 2222224457899999999 678999997643 7888743 33333322 2345689999999754 699999988999
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCC
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTG 520 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g 520 (652)
..++.++..........+..|.+|+++. ++||++++..+.|.+++..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 174 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred EEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 9999998776554444457899999985 499999999999999987543
No 38
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=3.5e-13 Score=136.76 Aligned_cols=261 Identities=11% Similarity=0.087 Sum_probs=182.7
Q ss_pred ecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC----CcCCccCCCCc
Q psy5768 17 NLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK----KYPAVTACNLH 92 (652)
Q Consensus 17 ~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~----~~~~p~~~~~~ 92 (652)
..++.+...+.. .+.....+..|.+|++++. +.||++| ...++|++++++|.....+...+ .+..|. +
T Consensus 10 ~~~~~~~~~~g~-~g~~~g~~~~p~~v~~~~~-g~l~v~~--~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~----~ 81 (286)
T 1q7f_A 10 RQRMIYHCKFGE-FGVMEGQFTEPSGVAVNAQ-NDIIVAD--TNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN----R 81 (286)
T ss_dssp CEEECEEEEECC-BSSSTTCBSCEEEEEECTT-CCEEEEE--GGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE----E
T ss_pred cceeEEEEeccC-CCCCCCccCCCceEEECCC-CCEEEEE--CCCCEEEEECCCCcEEEEecccCCCcccccCce----E
Confidence 344556666664 4556678999999999975 6799999 77889999999987655543211 135677 9
Q ss_pred EEEEccCCcEEEEeCC-CCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEe
Q psy5768 93 IAVDWIAQNIYWSDPK-ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 171 (652)
Q Consensus 93 lavDw~~~~lY~~d~~-~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~ 171 (652)
||++...++||+++.. .+.|.+.+.+|+....+.......|++|++|| +|.||+++.+ ...|.+.+.+|.....+..
T Consensus 82 i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~~ 159 (286)
T 1q7f_A 82 VAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECK-VMRVIIFDQNGNVLHKFGC 159 (286)
T ss_dssp EEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETT-TTEEEEECTTSCEEEEEEC
T ss_pred EEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECC-CCEEEEEcCCCCEEEEeCC
Confidence 9997678999999964 78999999999877666444567899999998 6789999975 5689999888875555433
Q ss_pred -ecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCccc
Q psy5768 172 -EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAEL 250 (652)
Q Consensus 172 -~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~l 250 (652)
..+..|++|++|+. ++||+++...+..+ +|+.
T Consensus 160 ~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~---------------------------~~~~------------------- 192 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDK-QEIFISDNRAHCVK---------------------------VFNY------------------- 192 (286)
T ss_dssp TTTCSSEEEEEECSS-SEEEEEEGGGTEEE---------------------------EEET-------------------
T ss_pred CCccCCcEEEEECCC-CCEEEEECCCCEEE---------------------------EEcC-------------------
Confidence 23668999999975 56888776422211 1110
Q ss_pred ceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEE
Q psy5768 251 CLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFY 330 (652)
Q Consensus 251 C~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lyw 330 (652)
++ ..+..+.. .+ .+..+.++++|+. ++||+
T Consensus 193 -------------------~g---------------~~~~~~~~-~g--------------~~~~p~~i~~d~~-G~l~v 222 (286)
T 1q7f_A 193 -------------------EG---------------QYLRQIGG-EG--------------ITNYPIGVGINSN-GEILI 222 (286)
T ss_dssp -------------------TC---------------CEEEEESC-TT--------------TSCSEEEEEECTT-CCEEE
T ss_pred -------------------CC---------------CEEEEEcc-CC--------------ccCCCcEEEECCC-CCEEE
Confidence 00 00011110 00 0123567888874 58999
Q ss_pred eecccc-cEEEEeccCCcceEEeec--cCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 331 SDIQKG-TINSVFFNGSNHRVLLER--QGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 331 sd~~~~-~I~~~~~~g~~~~~i~~~--~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
++...+ +|.+.+.+|.....+... ...|.+||+|.. ++||+++. .++|.+.++.
T Consensus 223 ~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~-g~l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDD-GSVVLASK-DYRLYIYRYV 279 (286)
T ss_dssp EECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETT-TEEEEEET-TTEEEEEECS
T ss_pred EeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCC-CcEEEECC-CCeEEEEEcc
Confidence 998776 899999887655555432 335899999985 57999975 6788877764
No 39
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.62 E-value=7.2e-12 Score=130.29 Aligned_cols=279 Identities=13% Similarity=0.090 Sum_probs=192.8
Q ss_pred CCeeEEEEECCCCEEEEEeccCC------cceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCE
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQ------VVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENV 111 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~------~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~ 111 (652)
..|.++++++.+++||+++ .. .+.|+.+++........+..+ ..|. ++++++.++.+|+++...+.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~--~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~----~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLAT--SQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPF----GATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEE--CCCTTTEESEEEEEECTTTCCEEEEEEES--SCCC----SEEEETTTTEEEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEc--CCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcc----eEEECCCCCEEEEEecCCCE
Confidence 4688999999999999998 54 568999988755433333333 3477 99999988889999998899
Q ss_pred EEEEEcCCCcE-EEEEeCCCC--------CceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEE
Q psy5768 112 IEVARLTGQYR-YVLISGGVD--------QPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITL 182 (652)
Q Consensus 112 I~v~~~dg~~~-~~l~~~~~~--------~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~l 182 (652)
|.+.+++.... ..+-...-. .|++++++|..++||+++++....|.+.++........+...-..|.++++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 99999865433 333222111 289999999888999999766678999888755444333322345899999
Q ss_pred eccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEE
Q psy5768 183 DLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCAC 262 (652)
Q Consensus 183 D~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C 262 (652)
++.+++||+.+.++ .... ++..
T Consensus 193 s~dg~~l~~~~~~~-~i~~---------------------------~d~~------------------------------ 214 (353)
T 3vgz_A 193 DSEGKRLYTTNADG-ELIT---------------------------IDTA------------------------------ 214 (353)
T ss_dssp ETTTTEEEEECTTS-EEEE---------------------------EETT------------------------------
T ss_pred CCCCCEEEEEcCCC-eEEE---------------------------EECC------------------------------
Confidence 99888888876642 2111 1000
Q ss_pred eCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEe
Q psy5768 263 AHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVF 342 (652)
Q Consensus 263 ~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~ 342 (652)
+ +..+..+.+ .... ....+.++++++..++||+++...+.|+.++
T Consensus 215 -------~---------------~~~~~~~~~-~~~~------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 215 -------D---------------NKILSRKKL-LDDG------------KEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp -------T---------------TEEEEEEEC-CCSS------------SCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred -------C---------------CeEEEEEEc-CCCC------------CCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 0 000111111 0000 0123567889998899999998888999998
Q ss_pred ccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecC
Q psy5768 343 FNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422 (652)
Q Consensus 343 ~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~ 422 (652)
+........+ ....+.+++++..++.||.++...+.|.++++... +.+........|.+++++|...+||++...
T Consensus 260 ~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 260 TRNGNILAKV-AAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY----KVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTCCEEEEE-ECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTT----EEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCcEEEEE-EcCCCceEEECCCCCEEEEEECCCCeEEEEECCCC----eEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 8643332222 23457899999999999999998899999997642 333333345689999999988899999865
No 40
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=1.8e-14 Score=144.60 Aligned_cols=196 Identities=18% Similarity=0.238 Sum_probs=151.1
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.++++|.. ++||+++. .+.|++++.++.....+. .+...|.+|++|.. ++||+++...+.|.+++.... .
T Consensus 67 ~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~---~ 140 (270)
T 1rwi_B 67 YQPQGLAVDGA-GTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQ-GAVYVADRGNNRVVKLAAGSK---T 140 (270)
T ss_dssp CSCCCEEECTT-CCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTT-CCEEEEEGGGTEEEEECTTCC---S
T ss_pred CCcceeEECCC-CCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCC-CCEEEEECCCCEEEEEECCCc---e
Confidence 45778899985 55999998 789999998886554443 45578999999985 569999998889999864322 2
Q ss_pred EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEE
Q psy5768 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIE 472 (652)
Q Consensus 393 ~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~ 472 (652)
...........|.+|+++| .|.||+++.+.. .|.+...++..........+..|.+|++|..+ +||+++...+.|.
T Consensus 141 ~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNN--RVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVV 216 (270)
T ss_dssp CEECCCCSCCSCCCEEECT-TCCEEEEEGGGT--EEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEE
T ss_pred eEeeccccCCCceeEEEeC-CCCEEEEECCCC--EEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEE
Confidence 2222223457899999999 567999998643 89999988876544333455789999999765 9999999999999
Q ss_pred EEecCCCceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccC
Q psy5768 473 RCDYDGTNRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 473 ~~~ldG~~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~ 519 (652)
.++.+|.....+....+..|.+|++. ++.||++++..++|..+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 217 KLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred EEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 99999877655444345789999998 468999999999998887653
No 41
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=1.6e-13 Score=140.75 Aligned_cols=216 Identities=13% Similarity=0.165 Sum_probs=158.4
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..-..+..+|+.++.|||+|...++|++++.++...+. ...-..|.+|++|..++ ||++. .+.|.+++..+.. .
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~--~ 85 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-VTMDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQS--A 85 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-EECSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTE--E
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-EeCCCceEEEEECCCCC-EEEEE--CCeEEEEECCCCc--E
Confidence 34578999999999999999999999999988754433 33335799999998777 76665 4688888875421 2
Q ss_pred EEEEEeC---CCCCceEEEEeCCCCEEEEEecCC---------CCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCE
Q psy5768 393 IVVVRLG---QHDKPRGIDIDSCDSRIYWTNWNS---------HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEK 460 (652)
Q Consensus 393 ~~~~~~~---~~~~P~~Iavdp~~g~Lywtd~~~---------~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~ 460 (652)
+.+.... ....|.+|++|| .|.||+++++. ....|++...+|... .+...+..|+||+++++++.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~--~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK--KYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE--EEEEEESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEE--EEeeccccccceEEcCCCCE
Confidence 3333321 234688999999 57799987542 234788888876433 23446678999999999999
Q ss_pred EEEEeCCCCeEEEEecC---CC--ceEEEecCC--CCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEecccCC
Q psy5768 461 LFWGDARLDKIERCDYD---GT--NRIVLSKIS--PLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532 (652)
Q Consensus 461 LYw~D~~~~~I~~~~ld---G~--~~~~l~~~~--~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~~~~ 532 (652)
|||+|...++|.+++++ |. +++++.... ...|.+|+++ +++||++++..+.|.++++.+|+....+......
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~ 242 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK 242 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC
Confidence 99999999999999985 32 234443321 3579999998 5799999999999999999888877766644344
Q ss_pred cceeE
Q psy5768 533 PMGIV 537 (652)
Q Consensus 533 p~~i~ 537 (652)
|..++
T Consensus 243 ~t~~~ 247 (297)
T 3g4e_A 243 TTSCC 247 (297)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 44443
No 42
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.60 E-value=3.5e-13 Score=139.79 Aligned_cols=258 Identities=14% Similarity=0.118 Sum_probs=170.8
Q ss_pred EeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEee-------------------cccCceeEEEeccC
Q psy5768 126 ISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-------------------IIMPIKDITLDLKF 186 (652)
Q Consensus 126 ~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~-------------------~~~~p~gl~lD~~~ 186 (652)
+.+.+..|.++++|+ +|.+||++.. ..+|.+.+.++.....+... ....|.||++|..+
T Consensus 14 ~~g~~~~p~~i~~d~-~g~~l~v~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDS-TNKGFYTSVQ-DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp EECSSSCCCCEECCT-TCSSEEEECT-TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred cCCccCCceEEEEcC-CCCEEEEEcC-CCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 445578999999998 5887788764 56899998887655544321 13579999999877
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCc
Q psy5768 187 FSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGV 266 (652)
Q Consensus 187 ~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~ 266 (652)
++||+++..++ ...+ .+... .++.
T Consensus 92 g~l~v~d~~~~-i~~~-------------d~~~g----~~~~-------------------------------------- 115 (322)
T 2fp8_A 92 NQLYIVDCYYH-LSVV-------------GSEGG----HATQ-------------------------------------- 115 (322)
T ss_dssp TEEEEEETTTE-EEEE-------------CTTCE----ECEE--------------------------------------
T ss_pred CcEEEEECCCC-EEEE-------------eCCCC----EEEE--------------------------------------
Confidence 89999987632 1111 00000 0000
Q ss_pred cccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecc------------
Q psy5768 267 VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ------------ 334 (652)
Q Consensus 267 l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~------------ 334 (652)
+.. .. .+ .. +..+.++++|...++||++|..
T Consensus 116 ----------------~~~-------~~-~~-------~~------~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 116 ----------------LAT-------SV-DG-------VP------FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp ----------------EES-------EE-TT-------EE------CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred ----------------ecc-------cC-CC-------Cc------ccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 000 00 00 00 1224567778756689998864
Q ss_pred -----cccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc-cEEEEEeCCCCCceEEE
Q psy5768 335 -----KGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ-RIVVVRLGQHDKPRGID 408 (652)
Q Consensus 335 -----~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~-~~~~~~~~~~~~P~~Ia 408 (652)
.++|++++.++...+.+...+..|.|||++..++.||++|...++|.++++++.... .+.+... .. |.+|+
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~ 235 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIK 235 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC--CC-CCCeE
Confidence 267888887755555555777899999999999999999999999999998863322 2333322 23 99999
Q ss_pred EeCCCCEEEEEecC--------CCCCceEEEeecCCCceEEEEcC---CCCCceEEEecCCCEEEEEeCCCCeEEEEecC
Q psy5768 409 IDSCDSRIYWTNWN--------SHLPSIQRAFFSGFGTESIITTD---ITMPNALALDHQAEKLFWGDARLDKIERCDYD 477 (652)
Q Consensus 409 vdp~~g~Lywtd~~--------~~~~~I~r~~ldG~~~~~l~~~~---l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld 477 (652)
+|+ .|.||+++++ .....|.+.+.+|.....+.... +.+|.+++.+ .++||+++...+.|.+++++
T Consensus 236 ~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 236 RNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEEEEC-
T ss_pred ECC-CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEe--CCEEEEeecCCCceEEEecc
Confidence 999 6789999976 11237888888876544443322 5678888875 78999999999999999998
Q ss_pred CCceEEE
Q psy5768 478 GTNRIVL 484 (652)
Q Consensus 478 G~~~~~l 484 (652)
.....++
T Consensus 313 ~~~~~~~ 319 (322)
T 2fp8_A 313 KKGNSFV 319 (322)
T ss_dssp -------
T ss_pred cccCccc
Confidence 7655443
No 43
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.57 E-value=1.6e-13 Score=142.37 Aligned_cols=208 Identities=12% Similarity=0.118 Sum_probs=148.9
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee--------------------ccCceeeeEEEccCCEEE
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE--------------------RQGSVEGLAYEYVHNYLY 371 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~--------------------~~~~~~glAvDw~~~~LY 371 (652)
.+..+.++++|.. +.+||++...++|++++.++...+.+.. ....|.|||+|...++||
T Consensus 17 ~~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 17 PSYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp SSSCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred ccCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 3456778888875 6788899888999999887654443321 124799999998678999
Q ss_pred EEeCCCCeEEEEEcCCCCCccEEEEEe---CCCCCceEEEEeCCCCEEEEEecCC---------------CCCceEEEee
Q psy5768 372 WTCNNDATINKIDLDSPKAQRIVVVRL---GQHDKPRGIDIDSCDSRIYWTNWNS---------------HLPSIQRAFF 433 (652)
Q Consensus 372 wtd~~~~~I~~~~~~~~~~~~~~~~~~---~~~~~P~~Iavdp~~g~Lywtd~~~---------------~~~~I~r~~l 433 (652)
++|... .|.+++.++.. .+.+... ..+..|.+|++||..|.||++|.+. ..++|++...
T Consensus 96 v~d~~~-~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 96 IVDCYY-HLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp EEETTT-EEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred EEECCC-CEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 999764 47777765311 2222211 1246799999999668999999762 1246888777
Q ss_pred cCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCC---ceEEEecCCCCceeEEEEeC-CEEEEEcCC-
Q psy5768 434 SGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGT---NRIVLSKISPLHPFDMAVYG-EFIFWTDWV- 508 (652)
Q Consensus 434 dG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~---~~~~l~~~~~~~p~glav~~-~~lYwtd~~- 508 (652)
++...+.+. ..+..|+||+++.+++.||++|...++|.+++++|. ..+.+.. ... |.+|+++. +.||++++.
T Consensus 173 ~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 173 STKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCc
Confidence 654444443 456789999999998999999999999999999973 3444443 223 99999984 689999977
Q ss_pred ---------CCeEEEEEccCCceEEEEe
Q psy5768 509 ---------IHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 509 ---------~~~I~~~~k~~g~~~~~~~ 527 (652)
.+.|.+++. .|+....+.
T Consensus 250 ~~~~~~~~~~~~v~~~d~-~G~~~~~~~ 276 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDE-FGNILEVIP 276 (322)
T ss_dssp TTSSTTSCEEEEEEEECT-TSCEEEEEE
T ss_pred ccccccCCCccEEEEECC-CCCEEEEEE
Confidence 467888887 465544443
No 44
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.56 E-value=1e-12 Score=133.34 Aligned_cols=207 Identities=13% Similarity=0.116 Sum_probs=155.7
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee------ccCceeeeEEEccCCEEEEEeCC-CCeEEEEE
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE------RQGSVEGLAYEYVHNYLYWTCNN-DATINKID 384 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~------~~~~~~glAvDw~~~~LYwtd~~-~~~I~~~~ 384 (652)
.+..+.++++|+. +.||+++...++|.+++.+|.....+.. ....|.+||++...++||+++.. .+.|.+++
T Consensus 28 ~~~~p~~v~~~~~-g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQ-NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTT-CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCC-CCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 3466889999975 5799999988999999988754443321 23579999998778999999964 78898888
Q ss_pred cCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE-cCCCCCceEEEecCCCEEEE
Q psy5768 385 LDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT-TDITMPNALALDHQAEKLFW 463 (652)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~-~~l~~P~glaiD~~~~~LYw 463 (652)
.++. ....+.......|.+|+++| .|.||+++.... +|.+...+|.....+.. ..+..|++|++|.. ++||+
T Consensus 107 ~~g~---~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~--~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v 179 (286)
T 1q7f_A 107 QYGQ---FVRKFGATILQHPRGVTVDN-KGRIIVVECKVM--RVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFI 179 (286)
T ss_dssp TTSC---EEEEECTTTCSCEEEEEECT-TSCEEEEETTTT--EEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEE
T ss_pred CCCc---EEEEecCccCCCceEEEEeC-CCCEEEEECCCC--EEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCEEE
Confidence 5542 22222223457899999999 578999997643 89998888765444432 24567999999975 67999
Q ss_pred EeCCCCeEEEEecCCCceEEEecCC-CCceeEEEEe-CCEEEEEcCCCC-eEEEEEccCCceEEEEe
Q psy5768 464 GDARLDKIERCDYDGTNRIVLSKIS-PLHPFDMAVY-GEFIFWTDWVIH-AVLRANKYTGEEVYTLR 527 (652)
Q Consensus 464 ~D~~~~~I~~~~ldG~~~~~l~~~~-~~~p~glav~-~~~lYwtd~~~~-~I~~~~k~~g~~~~~~~ 527 (652)
++...+.|..++.+|.....+.... +..|.+|+++ ++.||++++..+ .|.+.+. +|+....+.
T Consensus 180 ~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~ 245 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALE 245 (286)
T ss_dssp EEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEE
T ss_pred EECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEc
Confidence 9998999999999987666654322 4789999998 569999999886 9998886 565555554
No 45
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.53 E-value=1.6e-12 Score=134.00 Aligned_cols=212 Identities=15% Similarity=0.105 Sum_probs=149.6
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCC--eEEEEEcCCCCCc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDA--TINKIDLDSPKAQ 391 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~--~I~~~~~~~~~~~ 391 (652)
..+.++++|. +++|||+|...++|++++.+|.. ..+...-..|.|||+|..++ ||+++...+ +|.+++... +.
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~--g~ 106 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQ-QIHATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSD--GT 106 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCE-EEEEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTT--SC
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCce-EEEEeCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCC--Ce
Confidence 4578999998 56799999999999999988753 33333345899999998765 999997643 477766432 22
Q ss_pred cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE----------EcCCCCCceEEEecCCCEE
Q psy5768 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII----------TTDITMPNALALDHQAEKL 461 (652)
Q Consensus 392 ~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~----------~~~l~~P~glaiD~~~~~L 461 (652)
...+........|.++++.+ .+.+|++|... .+|++...++...++.. ...+..|+|| ++++++|
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~--g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLS-DTQYLTADSYR--GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp EEEEEECTTCSCEEEEEESS-SSEEEEEETTT--TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred EEEEEeCCCccccCcccccC-CCcEEEEECCC--CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 34444444567788999876 67899999753 48999887653222211 1235679998 5558899
Q ss_pred EEEeCCCCeEEEEecCCC----ceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEE--ecccCCcc
Q psy5768 462 FWGDARLDKIERCDYDGT----NRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTL--RKNIRRPM 534 (652)
Q Consensus 462 Yw~D~~~~~I~~~~ldG~----~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~--~~~~~~p~ 534 (652)
|++|...++|.++++++. .++++.. ...|.+|+++ ++.||++++..++|.+++.. |+...+. ......|.
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~ 258 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGST 258 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEE
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCce
Confidence 999999999999999852 2344433 3689999998 56999999999999999874 6543221 22224455
Q ss_pred eeEE
Q psy5768 535 GIVA 538 (652)
Q Consensus 535 ~i~~ 538 (652)
++++
T Consensus 259 ~~a~ 262 (306)
T 2p4o_A 259 AVAF 262 (306)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.51 E-value=1.3e-11 Score=128.54 Aligned_cols=289 Identities=11% Similarity=0.090 Sum_probs=184.2
Q ss_pred cEEEEeCC-----CCEEEEEEcCC-CcEEEEEe---C-CC-CCceeEEEcCCCCeEEEEecCCCCeEEEEeCC-CCCcEE
Q psy5768 101 NIYWSDPK-----ENVIEVARLTG-QYRYVLIS---G-GV-DQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTI 168 (652)
Q Consensus 101 ~lY~~d~~-----~~~I~v~~~dg-~~~~~l~~---~-~~-~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld-g~~~~~ 168 (652)
-+|+++.+ .+.|.+.+++. +....+.. . .+ ..|++|+++ .++||++... ...|.+.+.. ++....
T Consensus 3 g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~-~~~v~viD~~t~~~~~~ 79 (328)
T 3dsm_A 3 GLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNN-SHVIFAIDINTFKEVGR 79 (328)
T ss_dssp EEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGG-GTEEEEEETTTCCEEEE
T ss_pred eEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcC-CCEEEEEECcccEEEEE
Confidence 46777765 67788888763 32222111 0 12 468999997 6899999875 5688888876 333333
Q ss_pred EEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCc
Q psy5768 169 LAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCA 248 (652)
Q Consensus 169 ~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs 248 (652)
+ .....|.+|+++..+ +||+.+..++....+ ....
T Consensus 80 i--~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~i-------------D~~t----------------------------- 114 (328)
T 3dsm_A 80 I--TGFTSPRYIHFLSDE-KAYVTQIWDYRIFII-------------NPKT----------------------------- 114 (328)
T ss_dssp E--ECCSSEEEEEEEETT-EEEEEEBSCSEEEEE-------------ETTT-----------------------------
T ss_pred c--CCCCCCcEEEEeCCC-eEEEEECCCCeEEEE-------------ECCC-----------------------------
Confidence 3 345789999998664 999988322222211 0000
Q ss_pred ccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeE
Q psy5768 249 ELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTL 328 (652)
Q Consensus 249 ~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~l 328 (652)
...+..+.+..... ....+.+|++ ..++|
T Consensus 115 -------------------------------------~~~~~~i~~g~~~~------------~~~~p~~i~~--~~~~l 143 (328)
T 3dsm_A 115 -------------------------------------YEITGYIECPDMDM------------ESGSTEQMVQ--YGKYV 143 (328)
T ss_dssp -------------------------------------TEEEEEEECTTCCT------------TTCBCCCEEE--ETTEE
T ss_pred -------------------------------------CeEEEEEEcCCccc------------cCCCcceEEE--ECCEE
Confidence 00011222210000 0011234444 36889
Q ss_pred EEeec-ccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCC----------CeEEEEEcCCCCCccEEEEE
Q psy5768 329 FYSDI-QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNND----------ATINKIDLDSPKAQRIVVVR 397 (652)
Q Consensus 329 ywsd~-~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~----------~~I~~~~~~~~~~~~~~~~~ 397 (652)
|+++. ..+.|..+++........+..-..|.+|++|.. ++||++.... +.|.+++..... ....+.
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~~~~ 220 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKY-NKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEKQFK 220 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTT-SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEEEEE
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCC-CCEEEEECCCccCCccccCCceEEEEECCCCe--EEEEEe
Confidence 99987 378899998775433333333347999999985 4688888765 789999975421 222233
Q ss_pred eCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCce--EEEEcCCCCCceEEEecCCCEEEEEe----CCCCeE
Q psy5768 398 LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTE--SIITTDITMPNALALDHQAEKLFWGD----ARLDKI 471 (652)
Q Consensus 398 ~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~--~l~~~~l~~P~glaiD~~~~~LYw~D----~~~~~I 471 (652)
......|.+|+++|..++||+++. .|.+.+++..... .++......|.||++|+.+++||.++ ...+.|
T Consensus 221 ~~~g~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 221 FKLGDWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp CCTTCCCEEEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred cCCCCCceeEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 333468999999999999999974 7777777543321 11222246799999999899999999 778899
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEe
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVY 498 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~ 498 (652)
..++.+|.-.+.+.. + ..|.++++-
T Consensus 296 ~v~d~~g~~~~~i~~-G-~~P~~~~~~ 320 (328)
T 3dsm_A 296 YRYSPQGKLIDEFYV-G-IIPGAFCWK 320 (328)
T ss_dssp EEECTTCCEEEEEEE-E-ESEEEEEEE
T ss_pred EEECCCCCEEEEEEe-c-cCcceEEEe
Confidence 999999876666543 2 678888764
No 47
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.50 E-value=2.8e-12 Score=130.92 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=151.8
Q ss_pred ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy5768 312 MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ 391 (652)
Q Consensus 312 ~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~ 391 (652)
....+.+++||+..+.|||++...+.|++++.++. .+.+......|.+|++|..+ +||+++...+.|.+++.....
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~-- 101 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGE-- 101 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCC--
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCc--
Confidence 45668899999999899999999999999999877 55554555689999999855 589999888899999873211
Q ss_pred cEEEEEe---CCCCCceEEEEeCCCCEEEEEec--CC-------------CCCceEEEeecCCCceEEEEcCCCCCceEE
Q psy5768 392 RIVVVRL---GQHDKPRGIDIDSCDSRIYWTNW--NS-------------HLPSIQRAFFSGFGTESIITTDITMPNALA 453 (652)
Q Consensus 392 ~~~~~~~---~~~~~P~~Iavdp~~g~Lywtd~--~~-------------~~~~I~r~~ldG~~~~~l~~~~l~~P~gla 453 (652)
...+... .....|.+|+++| .|.||+||. +. ....|++...+|. ...+...+..|+||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT--LSAPIRDRVKPNGLA 178 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC--EEEEECCCSSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC--EEEeecCCCCCccEE
Confidence 2222211 1235788999999 688999875 11 1247988887743 233345677899999
Q ss_pred EecCCCEEEEEeCCCCeEEEEecC--CCc---eEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 454 LDHQAEKLFWGDARLDKIERCDYD--GTN---RIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 454 iD~~~~~LYw~D~~~~~I~~~~ld--G~~---~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
++++++.| |++...+.|..++++ |.- ++++ ......|.+|+++ ++.||.+. .+.|.+.++. |+....+.
T Consensus 179 ~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 179 FLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp ECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred ECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 99998888 999999999999986 432 3444 4345689999998 56899988 6789999885 66555554
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.49 E-value=1.2e-11 Score=128.60 Aligned_cols=234 Identities=16% Similarity=0.152 Sum_probs=161.8
Q ss_pred ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccC------cee
Q psy5768 286 VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQG------SVE 359 (652)
Q Consensus 286 ~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~------~~~ 359 (652)
.+.|..++.... . .+..+. ....+.++++++.. +||+++...+.|.++++........+..-. .|.
T Consensus 63 ~~~v~viD~~t~-~---~~~~i~---~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 63 SHVIFAIDINTF-K---EVGRIT---GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE 134 (328)
T ss_dssp GTEEEEEETTTC-C---EEEEEE---CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC
T ss_pred CCEEEEEECccc-E---EEEEcC---CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc
Confidence 356777776222 1 112332 23668889987654 999999778899999987544333332223 799
Q ss_pred eeEEEccCCEEEEEeCC-CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC--------CCceEE
Q psy5768 360 GLAYEYVHNYLYWTCNN-DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH--------LPSIQR 430 (652)
Q Consensus 360 glAvDw~~~~LYwtd~~-~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~--------~~~I~r 430 (652)
+|++ .++.||.++.+ .++|.++++... +.+........|.+|+++| .|.+|++..+.. ...|.+
T Consensus 135 ~i~~--~~~~lyv~~~~~~~~v~viD~~t~----~~~~~i~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 135 QMVQ--YGKYVYVNCWSYQNRILKIDTETD----KVVDELTIGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp CEEE--ETTEEEEEECTTCCEEEEEETTTT----EEEEEEECSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred eEEE--ECCEEEEEcCCCCCEEEEEECCCC----eEEEEEEcCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEE
Confidence 9999 48999999984 789999998642 2222333457899999999 678999987641 137888
Q ss_pred EeecCCCceEEEEcC-CCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceE--EEecCCCCceeEEEEe--CCEEEEE
Q psy5768 431 AFFSGFGTESIITTD-ITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRI--VLSKISPLHPFDMAVY--GEFIFWT 505 (652)
Q Consensus 431 ~~ldG~~~~~l~~~~-l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~--~l~~~~~~~p~glav~--~~~lYwt 505 (652)
.+.........+... -..|++|++++++++||+++. .|..+|.+..... .++......|.+|++. +++||++
T Consensus 208 id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 208 IDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp EETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred EECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 777543322222221 247999999999999999986 7899998754421 1111113689999996 6899999
Q ss_pred c----CCCCeEEEEEccCCceEEEEecccCCcceeEEE
Q psy5768 506 D----WVIHAVLRANKYTGEEVYTLRKNIRRPMGIVAI 539 (652)
Q Consensus 506 d----~~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~~ 539 (652)
+ +..+.|.+++.. |+....+..+ ..|.++..=
T Consensus 285 ~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~~ 320 (328)
T 3dsm_A 285 DAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCWK 320 (328)
T ss_dssp ECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEEE
T ss_pred cccccccCCEEEEECCC-CCEEEEEEec-cCcceEEEe
Confidence 9 788999999986 8877777644 356666543
No 49
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=2.4e-12 Score=132.39 Aligned_cols=206 Identities=17% Similarity=0.194 Sum_probs=149.8
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
.++..+.+..+++..+.|||+|...++|++++.+|. .+.+......|.+|++|..+ +||+++...+.|.+++.++.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~g~-- 117 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDADGQ-- 117 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSC--
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCCCC--
Confidence 345667899999999999999999999999988664 34444555689999999865 59999888889999987642
Q ss_pred ccEEEEEe---CCCCCceEEEEeCCCCEEEEEec--CC-------------CCCceEEEeecCCCceEEEEcCCCCCceE
Q psy5768 391 QRIVVVRL---GQHDKPRGIDIDSCDSRIYWTNW--NS-------------HLPSIQRAFFSGFGTESIITTDITMPNAL 452 (652)
Q Consensus 391 ~~~~~~~~---~~~~~P~~Iavdp~~g~Lywtd~--~~-------------~~~~I~r~~ldG~~~~~l~~~~l~~P~gl 452 (652)
...+... ..+..|.+|+++| .|.||+||. +. ....|++...++...+.+. .+..|+||
T Consensus 118 -~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl 193 (305)
T 3dr2_A 118 -AHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGL 193 (305)
T ss_dssp -EEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEE
T ss_pred -EEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcce
Confidence 2222211 1235789999999 688999874 11 1237888888544444443 66789999
Q ss_pred EEecCCCEEEEEeCCC-----CeEEEEecCCC---ceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceE
Q psy5768 453 ALDHQAEKLFWGDARL-----DKIERCDYDGT---NRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEV 523 (652)
Q Consensus 453 aiD~~~~~LYw~D~~~-----~~I~~~~ldG~---~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~ 523 (652)
+++++++.|||+|... +.|.++++++. +++.+.......|.+|+++ ++.||.+. .+.|+++++ +|+..
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~-~g~~~ 270 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--GTGVCVFDS-DGQLL 270 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--SSEEEEECT-TSCEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--CCcEEEECC-CCCEE
Confidence 9999999999999874 78999998864 2344443334679999998 45777776 346888887 46544
Q ss_pred EEEe
Q psy5768 524 YTLR 527 (652)
Q Consensus 524 ~~~~ 527 (652)
..+.
T Consensus 271 ~~~~ 274 (305)
T 3dr2_A 271 GHIP 274 (305)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 50
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.48 E-value=3e-14 Score=115.18 Aligned_cols=59 Identities=41% Similarity=0.930 Sum_probs=54.0
Q ss_pred cccCCCceeeccCeecCCccCCCCCCCCCCCCCC-CCCCCCCCCCCC-CeeecCCCCcccCCC
Q psy5768 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE-GILYCAMRDCRP-GYFKCDNNKCILSSH 651 (652)
Q Consensus 591 ~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde-~~~~C~~~~C~~-~~f~C~~~~Ci~~~~ 651 (652)
..|.+.+|+|.+|+||+..|+|||+.||.||||| .. |....|.+ ++|+|.||+||+.++
T Consensus 3 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~--C~~~~C~~~~~f~C~~g~CI~~~~ 63 (82)
T 2fyj_A 3 RTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESAS--CAYPTCFPLTQFTCNNGRCININW 63 (82)
T ss_dssp SSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSS--CCCSSSCSSSEEECTTSCEEETTC
T ss_pred CCCCCCceEeCCCCEEeccccCCCcccCCCccccccc--cccccCCCCCceECCCCCeEcHHH
Confidence 4688899999999999999999999999999999 55 98889965 999999999999876
No 51
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.47 E-value=3.7e-12 Score=134.01 Aligned_cols=203 Identities=14% Similarity=0.118 Sum_probs=145.1
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe------eccCceeeeEEEcc---CCEEEEEeCCC----
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL------ERQGSVEGLAYEYV---HNYLYWTCNND---- 377 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~------~~~~~~~glAvDw~---~~~LYwtd~~~---- 377 (652)
..+..+.+|++++. ++||+++.. ++|+++. +|.. +.+. .+...|.|||+++. ++.||+++...
T Consensus 28 ~~l~~P~~ia~~pd-G~l~V~e~~-g~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 28 GGLEVPWALAFLPD-GGMLIAERP-GRIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CCCSCEEEEEECTT-SCEEEEETT-TEEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCCCCceEEEEcCC-CeEEEEeCC-CeEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 45678899999976 569999986 8999998 6642 2222 34678999999987 78999999754
Q ss_pred -CeEEEEEcCCCCCc-cEEEEE-eC----CCCCceEEEEeCCCCEEEEEecCC-----------CCCceEEEeecCC---
Q psy5768 378 -ATINKIDLDSPKAQ-RIVVVR-LG----QHDKPRGIDIDSCDSRIYWTNWNS-----------HLPSIQRAFFSGF--- 436 (652)
Q Consensus 378 -~~I~~~~~~~~~~~-~~~~~~-~~----~~~~P~~Iavdp~~g~Lywtd~~~-----------~~~~I~r~~ldG~--- 436 (652)
++|.++++++.... .+.++. .. ....|.+|+++| .|+||+++... ..++|.|.+.||+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~ 182 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAP 182 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCT
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCC
Confidence 78999988642111 233433 22 245789999999 67999997432 2358999999983
Q ss_pred ---------CceEEEEcCCCCCceEEEecCCCEEEEEeCCCCe--------EEEEecCCC----------------ceEE
Q psy5768 437 ---------GTESIITTDITMPNALALDHQAEKLFWGDARLDK--------IERCDYDGT----------------NRIV 483 (652)
Q Consensus 437 ---------~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~--------I~~~~ldG~----------------~~~~ 483 (652)
....++...+..|.||++|+.+++||++|.+.+. |..+.-.+. .+..
T Consensus 183 ~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 183 GNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp TCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeE
Confidence 1233455678899999999988999999987665 555543220 0111
Q ss_pred EecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccC
Q psy5768 484 LSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 484 l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~ 519 (652)
.. .....|.||+++++.+|++++..+.|.+++...
T Consensus 263 ~~-~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~ 297 (352)
T 2ism_A 263 FW-PQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEG 297 (352)
T ss_dssp EC-TTCCCEEEEEEETTEEEEEETTTTEEEEEEEEE
T ss_pred ec-CCCCCCcceEEECCEEEEEECCCCEEEEEEECC
Confidence 11 112468999999999999999999999987654
No 52
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.46 E-value=5.5e-10 Score=115.15 Aligned_cols=312 Identities=13% Similarity=0.129 Sum_probs=196.2
Q ss_pred eEEEecCCCCeEEEEecC--CCeeE-EEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcC--CCccEE
Q psy5768 2 FIAVSSPTQSKIVVCNLE--GEYQT-TILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD--GTKRET 76 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~d--gs~~~~ 76 (652)
+++|++...+.|.+++++ |+... .... ....|.++++++.+++||+++ ...+.|..+.++ +...+.
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~spdg~~l~~~~--~~~~~v~~~~~~~~~~~~~~ 76 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVVD-------VPGQVQPMVVSPDKRYLYVGV--RPEFRVLAYRIAPDDGALTF 76 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEE-------CSSCCCCEEECTTSSEEEEEE--TTTTEEEEEEECTTTCCEEE
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeEe-------cCCCCceEEECCCCCEEEEee--cCCCeEEEEEecCCCCceee
Confidence 478887888999999886 43221 1122 234788999999999999999 656788887776 333332
Q ss_pred E--EeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc-CCCcEEEEE-eCCCCCceeEEEcCCCCeEEEEecCC
Q psy5768 77 V--VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL-TGQYRYVLI-SGGVDQPSALAVDPESGYLFWSESGK 152 (652)
Q Consensus 77 v--~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~-dg~~~~~l~-~~~~~~P~~iavd~~~g~lywtd~~~ 152 (652)
+ +..+ ..|. +++++..++.||++....+.|.+.++ +|.....+. -.....|..++++|...+||.++.+
T Consensus 77 ~~~~~~~--~~~~----~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~- 149 (343)
T 1ri6_A 77 AAESALP--GSLT----HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK- 149 (343)
T ss_dssp EEEEECS--SCCS----EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-
T ss_pred ccccccC--CCCc----EEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-
Confidence 2 2222 3567 99999888889999987888999888 333222221 1234679999999987789999854
Q ss_pred CCeEEEEeCCCCC-cEEEE----e-ecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCccee
Q psy5768 153 IPLIARAGLDGKK-QTILA----Q-EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDI 226 (652)
Q Consensus 153 ~~~I~~~~ldg~~-~~~~~----~-~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 226 (652)
...|...+++... ...+. . ..-..|.++++++.+++||+++...+..+.+
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~------------------------ 205 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVW------------------------ 205 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEE------------------------
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEE------------------------
Confidence 4578887776422 22111 1 1134788999999888888887543332221
Q ss_pred eeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCcee
Q psy5768 227 KIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFES 306 (652)
Q Consensus 227 ~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~ 306 (652)
..... .+. +. .+..+.. -+...
T Consensus 206 ---~~~~~-----------------------------------~g~-------~~------~~~~~~~-~~~~~------ 227 (343)
T 1ri6_A 206 ---ELKDP-----------------------------------HGN-------IE------CVQTLDM-MPENF------ 227 (343)
T ss_dssp ---ESSCT-----------------------------------TSC-------CE------EEEEEEC-SCTTC------
T ss_pred ---EecCC-----------------------------------CCc-------EE------EEeeccc-cCccc------
Confidence 10000 000 00 0000110 00000
Q ss_pred eeeccccceEEEEEEEcCCCeEEEeecccccEEEEecc--CCcceEEe--eccCceeeeEEEccCCEEEEEeCCCCeEEE
Q psy5768 307 IRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFN--GSNHRVLL--ERQGSVEGLAYEYVHNYLYWTCNNDATINK 382 (652)
Q Consensus 307 ~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~--g~~~~~i~--~~~~~~~glAvDw~~~~LYwtd~~~~~I~~ 382 (652)
.....+.+++|++..+.||+++...+.|...+++ +...+.+. .....|.++++++.++.||.+....+.|.+
T Consensus 228 ----~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 228 ----SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp ----CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred ----cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEE
Confidence 0113356788888888899888777888888876 32223222 333459999999999999999987888888
Q ss_pred EEcCCCCCccEEEEEeCCCCCceEEEEeCCCCE
Q psy5768 383 IDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSR 415 (652)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~ 415 (652)
.+++...+..+.+........|.+|+++|..+.
T Consensus 304 ~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 304 YEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp EEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred EEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 766543322333444444578999999986554
No 53
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.46 E-value=1.1e-14 Score=116.75 Aligned_cols=58 Identities=38% Similarity=0.904 Sum_probs=54.1
Q ss_pred ccCCCceeeccCeecCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCcccCCC
Q psy5768 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 592 ~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~~C~~~~f~C~~~~Ci~~~~ 651 (652)
.|.+.+|+|.+|+||+..|+|||+.||.|||||.. |....|.+++|+|.||+|||.+|
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~--C~~~~C~~~~f~C~~g~Ci~~~~ 59 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEAS--CPVLTCGPASFQCNSSTCIPQLW 59 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTTTT--HHHHHCCTTEEECTTSCEEEGGG
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccccc--cccccCCceeeECCCCCEEeccc
Confidence 58889999999999999999999999999999987 87678999999999999999876
No 54
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.45 E-value=3.3e-10 Score=116.88 Aligned_cols=311 Identities=11% Similarity=0.079 Sum_probs=186.4
Q ss_pred CCCEEEEEeccCCcceEEEEEcCCCc-cEEE-EeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC---CCcE
Q psy5768 48 VKGKMFWSNVTKQVVTIEMAFMDGTK-RETV-VSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT---GQYR 122 (652)
Q Consensus 48 ~~~~lyw~d~~~~~~~I~~~~~dgs~-~~~v-~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d---g~~~ 122 (652)
.++.+|+++ ...+.|+.++++.+. .+.+ .... ...|. ++++++.++.||++....+.|.+.+++ |+..
T Consensus 3 ~~~~l~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~ 75 (343)
T 1ri6_A 3 LKQTVYIAS--PESQQIHVWNLNHEGALTLTQVVDV-PGQVQ----PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT 75 (343)
T ss_dssp CEEEEEEEE--GGGTEEEEEEECTTSCEEEEEEEEC-SSCCC----CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ceEEEEEeC--CCCCeEEEEEECCCCcEEEeeeEec-CCCCc----eEEECCCCCEEEEeecCCCeEEEEEecCCCCcee
Confidence 457899997 677899999886332 1222 1122 35677 999999888899999877899998876 3332
Q ss_pred EE-EEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC-CCCCcEEEE-eecccCceeEEEeccCCEEEEEeCCCCcE
Q psy5768 123 YV-LISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL-DGKKQTILA-QEIIMPIKDITLDLKFFSAFYRNLSKGNI 199 (652)
Q Consensus 123 ~~-l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l-dg~~~~~~~-~~~~~~p~gl~lD~~~~~ly~~d~~g~~~ 199 (652)
.+ .+.. ...|..++++|...+||++... ...|...++ +|.....+. ......|.++++++.+++||+.+...+..
T Consensus 76 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v 153 (343)
T 1ri6_A 76 FAAESAL-PGSLTHISTDHQGQFVFVGSYN-AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRI 153 (343)
T ss_dssp EEEEEEC-SSCCSEEEECTTSSEEEEEETT-TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred ecccccc-CCCCcEEEEcCCCCEEEEEecC-CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEE
Confidence 21 1222 2489999999988889999864 345666555 332222111 11234567777777766776665321221
Q ss_pred EEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccce
Q psy5768 200 HIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDA 279 (652)
Q Consensus 200 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~ 279 (652)
+ +|+... +++
T Consensus 154 ~---------------------------~~d~~~------------------------------------~~~------- 163 (343)
T 1ri6_A 154 C---------------------------LFTVSD------------------------------------DGH------- 163 (343)
T ss_dssp E---------------------------EEEECT------------------------------------TSC-------
T ss_pred E---------------------------EEEecC------------------------------------CCc-------
Confidence 1 111000 000
Q ss_pred EEEEeeeccee--EEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccC--CcceEE--ee
Q psy5768 280 FIMYSRVNRID--SIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG--SNHRVL--LE 353 (652)
Q Consensus 280 ~Ll~s~~~~i~--~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g--~~~~~i--~~ 353 (652)
+ ..+. .+.. . .-..+.++++++..+.||+++...+.|...+++. ...+.+ ..
T Consensus 164 -~-----~~~~~~~~~~-~---------------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~ 221 (343)
T 1ri6_A 164 -L-----VAQDPAEVTT-V---------------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD 221 (343)
T ss_dssp -E-----EEEEEEEEEC-S---------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE
T ss_pred -e-----eeeccccccc-C---------------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc
Confidence 0 0000 0111 0 0023456888888888999987778888888753 111111 11
Q ss_pred ----c---cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCC
Q psy5768 354 ----R---QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLP 426 (652)
Q Consensus 354 ----~---~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~ 426 (652)
+ ...|.++++++.++.||++....+.|.+.+++...+..+.+........|.+++++|...+||.+.....
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-- 299 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH-- 299 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC--
T ss_pred ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC--
Confidence 1 2356689999999999999988899999998632221233333333445999999998889999986543
Q ss_pred ceEEEeec--CCCceEEEEcCC-CCCceEEEecCCCEE
Q psy5768 427 SIQRAFFS--GFGTESIITTDI-TMPNALALDHQAEKL 461 (652)
Q Consensus 427 ~I~r~~ld--G~~~~~l~~~~l-~~P~glaiD~~~~~L 461 (652)
.|....+| ....+.+..... ..|.+|+++...+++
T Consensus 300 ~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 300 HISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGGS 337 (343)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC---
T ss_pred eEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCCc
Confidence 55544444 332333333222 579999999776654
No 55
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.44 E-value=1.2e-10 Score=122.37 Aligned_cols=149 Identities=15% Similarity=0.098 Sum_probs=113.1
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEe-----CCCcCCccCCCCcEEEEcc---CCcEEEEeC
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVS-----QKKYPAVTACNLHIAVDWI---AQNIYWSDP 107 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~-----~~~~~~p~~~~~~lavDw~---~~~lY~~d~ 107 (652)
.+..|++|++++ +++||+++ .. ++|++++.+|. +.+.. .+ ...|. |||++.. ++.||+++.
T Consensus 27 ~l~~P~~ia~~p-dG~l~V~e--~~-g~I~~~d~~G~--~~~~~~~v~~~g-~~g~~----gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 27 DLEVPWSIAPLG-GGRYLVTE--RP-GRLVLISPSGK--KLVASFDVANVG-EAGLL----GLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp SCSCEEEEEEEE-TTEEEEEE--TT-TEEEEECSSCE--EEEEECCCCCST-TCSEE----EEEECTTTTTSCEEEEEEE
T ss_pred CCCCCeEEEEcC-CCeEEEEe--CC-CEEEEEeCCCc--eEeeccceeecC-CCcee----eEEeCCCCCcCCEEEEEEe
Confidence 578999999997 57899999 55 89999987775 44422 23 44566 9999986 789999986
Q ss_pred C---C----CEEEEEEcCCC-----cEEEEEe----CCCCCceeEEEcCCCCeEEEEecC------------CCCeEEEE
Q psy5768 108 K---E----NVIEVARLTGQ-----YRYVLIS----GGVDQPSALAVDPESGYLFWSESG------------KIPLIARA 159 (652)
Q Consensus 108 ~---~----~~I~v~~~dg~-----~~~~l~~----~~~~~P~~iavd~~~g~lywtd~~------------~~~~I~~~ 159 (652)
. . ++|.++++++. ..++++. .....|..|+++| .|+||++... ...+|.|.
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEE
Confidence 3 3 68999998875 2444443 2345789999999 7899999632 13589999
Q ss_pred eCCCCC-------cEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 160 GLDGKK-------QTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 160 ~ldg~~-------~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
+.||+- ...++..++..|.||++|+.+++||+.+...
T Consensus 175 ~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGP 218 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCS
T ss_pred cCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCC
Confidence 999972 1234566788999999999899999998753
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.43 E-value=1.2e-09 Score=113.73 Aligned_cols=283 Identities=13% Similarity=0.104 Sum_probs=174.5
Q ss_pred CCCCceeEEEcCCCCeEEEEec-CCCCeEEEEeCCCCCcEEEEe--ecccCceeEEEeccCCEEEEEeCCCCcEEEEEec
Q psy5768 129 GVDQPSALAVDPESGYLFWSES-GKIPLIARAGLDGKKQTILAQ--EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLS 205 (652)
Q Consensus 129 ~~~~P~~iavd~~~g~lywtd~-~~~~~I~~~~ldg~~~~~~~~--~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~ 205 (652)
....|..++++| +|.||.++. +....|...++++.....+.. .....|.+|++++.+++||+.+...+..+.+...
T Consensus 38 ~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 38 ATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp ECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 357899999999 667999986 334578888886554333322 2356899999999999999998765544332110
Q ss_pred CCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEee
Q psy5768 206 NLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSR 285 (652)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~ 285 (652)
.....
T Consensus 117 ~~g~~--------------------------------------------------------------------------- 121 (347)
T 3hfq_A 117 ADGAL--------------------------------------------------------------------------- 121 (347)
T ss_dssp TTSCE---------------------------------------------------------------------------
T ss_pred CCCCe---------------------------------------------------------------------------
Confidence 00000
Q ss_pred ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccC-CcceEEe----eccCceee
Q psy5768 286 VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNG-SNHRVLL----ERQGSVEG 360 (652)
Q Consensus 286 ~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g-~~~~~i~----~~~~~~~g 360 (652)
..+..+.. .+.. |. .......+.++++++..+ +|.++...+.|...+++. .....+. ..-..|.+
T Consensus 122 -~~~~~~~~-~~~~---p~----~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 122 -TLTDTVQH-SGHG---PR----PEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp -EEEEEEEC-CCCC---SS----TTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred -eecceeec-CCCC---CC----ccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 00001111 0000 00 001113456788888766 999998888888888762 2222111 22237899
Q ss_pred eEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCC-------CCceEEEEeCCCCEEEEEecCCCCCceEEEee
Q psy5768 361 LAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQH-------DKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFF 433 (652)
Q Consensus 361 lAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~-------~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~l 433 (652)
+++++.++.||.++...+.|.+.+++...+....+...... ..|.+++++|...+||+++.+.. .|....+
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~--~v~v~~~ 269 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN--TLAVFAV 269 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT--EEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC--EEEEEEE
Confidence 99999999999999988999888877432222222221111 45899999998889999987654 5666665
Q ss_pred cCC-CceEEE--EcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecC--CCceEEEec-CCCCceeEEEEeC
Q psy5768 434 SGF-GTESII--TTDITMPNALALDHQAEKLFWGDARLDKIERCDYD--GTNRIVLSK-ISPLHPFDMAVYG 499 (652)
Q Consensus 434 dG~-~~~~l~--~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld--G~~~~~l~~-~~~~~p~glav~~ 499 (652)
+.. ..+.+. ...-..|.+|++++++++||.++...+.|..+++| ....+.+.. ..+..|..+...+
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~~~~p~p~~~~~~~ 341 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQKDVTVPEGVCVRFLE 341 (347)
T ss_dssp CGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEECTTEEEEEECC
T ss_pred CCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecccceecCCCcEEEehh
Confidence 522 222222 22234799999999999999999887877777554 333333322 1245666555443
No 57
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.42 E-value=4.2e-11 Score=125.92 Aligned_cols=148 Identities=16% Similarity=0.147 Sum_probs=110.4
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEE-----eCCCcCCccCCCCcEEEEcc---CCcEEEEeC
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVV-----SQKKYPAVTACNLHIAVDWI---AQNIYWSDP 107 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~-----~~~~~~~p~~~~~~lavDw~---~~~lY~~d~ 107 (652)
.+..|.+|++++. ++||+++ .. ++|+++. +|.. +.+. ..+ ...|. |||++.- ++.||+++.
T Consensus 29 ~l~~P~~ia~~pd-G~l~V~e--~~-g~I~~i~-~g~~-~~~~~~~v~~~g-~~~p~----gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 29 GLEVPWALAFLPD-GGMLIAE--RP-GRIRLFR-EGRL-STYAELSVYHRG-ESGLL----GLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CCSCEEEEEECTT-SCEEEEE--TT-TEEEEEE-TTEE-EEEEECCCCCST-TCSEE----EEEECTTTTTSCEEEEEEE
T ss_pred CCCCceEEEEcCC-CeEEEEe--CC-CeEEEEE-CCCc-cEeecceEeecC-CCCce----eEEECCCCCCCCEEEEEEe
Confidence 5789999999975 6799999 55 8999998 7652 3332 223 45577 9999986 689999987
Q ss_pred CC-----CEEEEEEcCCC---cEEEEEe------CCCCCceeEEEcCCCCeEEEEecC------------CCCeEEEEeC
Q psy5768 108 KE-----NVIEVARLTGQ---YRYVLIS------GGVDQPSALAVDPESGYLFWSESG------------KIPLIARAGL 161 (652)
Q Consensus 108 ~~-----~~I~v~~~dg~---~~~~l~~------~~~~~P~~iavd~~~g~lywtd~~------------~~~~I~~~~l 161 (652)
.. ++|.++++++. ..++++. .....|.+|+++| .|+||+++.. ...+|.|.+.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 54 78999998864 2344443 2345789999999 7899999742 1258999999
Q ss_pred CCCC------------cEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 162 DGKK------------QTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 162 dg~~------------~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
||+- ...++..++..|.||++|+.+++||+.+..
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred CCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 9831 223455567889999999988999998864
No 58
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=1.8e-10 Score=117.83 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=161.1
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVA 115 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~ 115 (652)
...-+.+..|++.++.|||+| ...++|+++++++...+.+ .. -..|. ++++|. .++||++. .+.|.+.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d--~~~~~i~~~d~~~~~~~~~-~~--~~~~~----~i~~~~-dG~l~v~~--~~~l~~~ 78 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVD--IPAKKVCRWDSFTKQVQRV-TM--DAPVS----SVALRQ-SGGYVATI--GTKFCAL 78 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEE--TTTTEEEEEETTTCCEEEE-EC--SSCEE----EEEEBT-TSSEEEEE--TTEEEEE
T ss_pred CCccccCCeEECCCCEEEEEE--CCCCEEEEEECCCCcEEEE-eC--CCceE----EEEECC-CCCEEEEE--CCeEEEE
Confidence 456778999999999999999 8889999999987654443 22 24577 999997 45587776 5689999
Q ss_pred EcCCCcEEEEEeC----CCCCceeEEEcCCCCeEEEEecCC----------CCeEEEEeCCCCCcEEEEeecccCceeEE
Q psy5768 116 RLTGQYRYVLISG----GVDQPSALAVDPESGYLFWSESGK----------IPLIARAGLDGKKQTILAQEIIMPIKDIT 181 (652)
Q Consensus 116 ~~dg~~~~~l~~~----~~~~P~~iavd~~~g~lywtd~~~----------~~~I~~~~ldg~~~~~~~~~~~~~p~gl~ 181 (652)
++++...+.+... ....|.++++|| .|.||+++++. ...|.+.+.+|+... +...+..|+||+
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~--~~~~~~~pngi~ 155 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK--YFDQVDISNGLD 155 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--EEEEESBEEEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE--EeeccccccceE
Confidence 9876555555443 234689999999 68899988542 246888887764332 344577899999
Q ss_pred EeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEE
Q psy5768 182 LDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCA 261 (652)
Q Consensus 182 lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~ 261 (652)
+++.++.|||++...+.+..+ ....
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~---------------------------~~d~---------------------------- 180 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAF---------------------------DYDL---------------------------- 180 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEE---------------------------EECT----------------------------
T ss_pred EcCCCCEEEEecCCCCcEEEE---------------------------eccC----------------------------
Confidence 999999999998753322211 1000
Q ss_pred EeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEE
Q psy5768 262 CAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSV 341 (652)
Q Consensus 262 C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~ 341 (652)
++|. ++....+ ..+ . .....+-++++|.. +.||+++...++|.++
T Consensus 181 -------~~G~----------~~~~~~~--~~~-~--------------~~~~~p~g~~~d~~-G~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 181 -------QTGQ----------ISNRRSV--YKL-E--------------KEEQIPDGMCIDAE-GKLWVACYNGGRVIRL 225 (297)
T ss_dssp -------TTCC----------EEEEEEE--EEC-C--------------GGGCEEEEEEEBTT-SCEEEEEETTTEEEEE
T ss_pred -------CCCc----------ccCcEEE--EEC-C--------------CCCCCCCeeEECCC-CCEEEEEcCCCEEEEE
Confidence 0010 0000000 011 0 00123567888876 5799999888899999
Q ss_pred ecc-CCcceEEeeccCceeeeEEE-ccCCEEEEEeCC
Q psy5768 342 FFN-GSNHRVLLERQGSVEGLAYE-YVHNYLYWTCNN 376 (652)
Q Consensus 342 ~~~-g~~~~~i~~~~~~~~glAvD-w~~~~LYwtd~~ 376 (652)
+.+ |.....+......|.++|+. ...+.||+|...
T Consensus 226 d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 226 DPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp CTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred cCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 987 65444544455689999998 788999999864
No 59
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.39 E-value=5.9e-10 Score=114.91 Aligned_cols=289 Identities=10% Similarity=0.043 Sum_probs=184.9
Q ss_pred EEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCc-EEEEee
Q psy5768 94 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ-TILAQE 172 (652)
Q Consensus 94 avDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~-~~~~~~ 172 (652)
.++...+.+|+++...+.|.+.+++.......+......| .++++|...+||+++.+ ...|.+.+++.... ...+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~-~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF-CQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST-TCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC-CCeEEEEECCCCceeEEeccc
Confidence 4455678999999999999999987554444444455667 99999977789999875 45788888765544 322222
Q ss_pred cccCcee-EEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccc
Q psy5768 173 IIMPIKD-ITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELC 251 (652)
Q Consensus 173 ~~~~p~g-l~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC 251 (652)
-..|.. +++++.+++|| +...++... .|.+|+..
T Consensus 82 -~~~~~~~~~~s~dg~~l~-~~~~~~~~~------------------------~i~v~d~~------------------- 116 (331)
T 3u4y_A 82 -GQSSMADVDITPDDQFAV-TVTGLNHPF------------------------NMQSYSFL------------------- 116 (331)
T ss_dssp -CSSCCCCEEECTTSSEEE-ECCCSSSSC------------------------EEEEEETT-------------------
T ss_pred -CCCCccceEECCCCCEEE-EecCCCCcc------------------------cEEEEECC-------------------
Confidence 245666 88887777777 433321100 01111100
Q ss_pred eecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEe
Q psy5768 252 LYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYS 331 (652)
Q Consensus 252 ~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lyws 331 (652)
.+ ..+..+.. -..+.++++++..++||.+
T Consensus 117 ------------------~~---------------~~~~~~~~------------------~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 117 ------------------KN---------------KFISTIPI------------------PYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp ------------------TT---------------EEEEEEEC------------------CTTEEEEEECTTSSCEEEE
T ss_pred ------------------CC---------------CeEEEEEC------------------CCCccceEECCCCCEEEEE
Confidence 00 00011111 0124567788887788888
Q ss_pred eccccc-EEEEeccCCcc-----eEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCce
Q psy5768 332 DIQKGT-INSVFFNGSNH-----RVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPR 405 (652)
Q Consensus 332 d~~~~~-I~~~~~~g~~~-----~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~ 405 (652)
+...+. |...+++.... ...+.....|.++++++.++.||.++...+.|.+.++..... ...+........|.
T Consensus 146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~~~~~~ 224 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-ITLLNAVGTNNLPG 224 (331)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-CEEEEEEECSSCCC
T ss_pred ecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-cceeeeccCCCCCc
Confidence 877677 66666553221 122233457999999999999999999899999999864331 11133334558899
Q ss_pred EEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE--cC-------CCCCceEEEecCCCEEEEEeCCCCeEEEEec
Q psy5768 406 GIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT--TD-------ITMPNALALDHQAEKLFWGDARLDKIERCDY 476 (652)
Q Consensus 406 ~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~--~~-------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~l 476 (652)
+++++|...+||++..+.. .|...++.....+.+.. .. ....+++++++++++||.+....+.|..+++
T Consensus 225 ~~~~spdg~~l~v~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTESTV--DVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp CEEECTTSSEEEEECSSEE--EEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred eEEECCCCCEEEEEEcCCC--EEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 9999998888999987543 67777665433321211 11 1122458999999999999998899999999
Q ss_pred CCCceEE
Q psy5768 477 DGTNRIV 483 (652)
Q Consensus 477 dG~~~~~ 483 (652)
++.....
T Consensus 303 ~~~~~~~ 309 (331)
T 3u4y_A 303 SGKVVGY 309 (331)
T ss_dssp TSCEEEE
T ss_pred cCCcccc
Confidence 8765443
No 60
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.39 E-value=1.2e-10 Score=122.58 Aligned_cols=203 Identities=10% Similarity=0.072 Sum_probs=146.2
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe------eccCceeeeEEEcc---CCEEEEEeCC---C-
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL------ERQGSVEGLAYEYV---HNYLYWTCNN---D- 377 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~------~~~~~~~glAvDw~---~~~LYwtd~~---~- 377 (652)
..+..+.+|++++. ++||+++.. ++|++++.+|. +.+. .+...|.|||+++. ++.||+++.. .
T Consensus 26 ~~l~~P~~ia~~pd-G~l~V~e~~-g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 26 SDLEVPWSIAPLGG-GRYLVTERP-GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp CSCSCEEEEEEEET-TEEEEEETT-TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCCCCeEEEEcCC-CeEEEEeCC-CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 45677899999984 679999987 89999976664 3332 34568999999987 8999999863 3
Q ss_pred ---CeEEEEEcCCCCCc---cEEEEE-e--CCCCCceEEEEeCCCCEEEEEecCC-----------CCCceEEEeecCCC
Q psy5768 378 ---ATINKIDLDSPKAQ---RIVVVR-L--GQHDKPRGIDIDSCDSRIYWTNWNS-----------HLPSIQRAFFSGFG 437 (652)
Q Consensus 378 ---~~I~~~~~~~~~~~---~~~~~~-~--~~~~~P~~Iavdp~~g~Lywtd~~~-----------~~~~I~r~~ldG~~ 437 (652)
.+|.++++++.... .++++. . .....|.+|+++| .|+||++.... ..++|.|.+.||+-
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~ 180 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP 180 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC
Confidence 67999988754211 233332 1 2345789999999 68999996431 13589999999972
Q ss_pred -------ceEEEEcCCCCCceEEEecCCCEEEEEeCCCCe---EEEEecCCCc-----------------eEEEecCCCC
Q psy5768 438 -------TESIITTDITMPNALALDHQAEKLFWGDARLDK---IERCDYDGTN-----------------RIVLSKISPL 490 (652)
Q Consensus 438 -------~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~---I~~~~ldG~~-----------------~~~l~~~~~~ 490 (652)
...++...+..|.||++|+.+++||++|...+. |..+.- |.+ +.........
T Consensus 181 p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ 259 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETW 259 (354)
T ss_dssp CTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred CCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCc
Confidence 234556688999999999988999999987654 444432 321 1111111235
Q ss_pred ceeEEEE--------eCCEEEEEcCCCCeEEEEEccC
Q psy5768 491 HPFDMAV--------YGEFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 491 ~p~glav--------~~~~lYwtd~~~~~I~~~~k~~ 519 (652)
.|.|+++ +++.+|++++..+.|.+++...
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 6999999 5789999999999999998754
No 61
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.36 E-value=2.9e-10 Score=119.48 Aligned_cols=274 Identities=12% Similarity=0.081 Sum_probs=166.6
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEE------eCCCcCCccCCCCcEEEEcc---CCcEEEEe
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVV------SQKKYPAVTACNLHIAVDWI---AQNIYWSD 106 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~------~~~~~~~p~~~~~~lavDw~---~~~lY~~d 106 (652)
.+..|++|++++...+||+++ . .++|+++..+|...+.+. ..+ ...+. |||++.. ++.||+++
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e--~-~G~i~~~~~~g~~~~~~~~~~~v~~~g-~~g~~----gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITL--R-GGELRHWQAGKGLSAPLSGVPDVWAHG-QGGLL----DVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEE--T-TTEEEEEETTTEECCCCBSCCCCCCST-TCSEE----EEEECTTHHHHCEEEEEE
T ss_pred CCCCcEEEEEcCCCCEEEEEe--C-CceEEEEeCCCceeeEecCCcccccCC-CCCce----eEEECCCCCCCCEEEEEE
Confidence 478999999998643399999 5 489999988775322221 122 23455 9999875 78999998
Q ss_pred CC-------CCEEEEEEcCCC-----cEEEEEeC------CCCCceeEEEcCCCCeEEEEecCC------------CCeE
Q psy5768 107 PK-------ENVIEVARLTGQ-----YRYVLISG------GVDQPSALAVDPESGYLFWSESGK------------IPLI 156 (652)
Q Consensus 107 ~~-------~~~I~v~~~dg~-----~~~~l~~~------~~~~P~~iavd~~~g~lywtd~~~------------~~~I 156 (652)
.. ..+|.++++++. ..++++.. ....|..|+++| .|+||++.... ..+|
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 64 457999888643 34555543 234588999999 78999996321 3589
Q ss_pred EEEeCCCCC------------cEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcc
Q psy5768 157 ARAGLDGKK------------QTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLK 224 (652)
Q Consensus 157 ~~~~ldg~~------------~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 224 (652)
.|.+.||+- ...++..++..|.||++|+.+++||+.+........|.. +.++.. +
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~----------i~~G~n---y 233 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINI----------PQKGKN---Y 233 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEEC----------CCTTCB---C
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeE----------eccCCc---C
Confidence 999999872 233455678889999999989999998765321122211 111100 0
Q ss_pred eeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCc
Q psy5768 225 DIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPF 304 (652)
Q Consensus 225 ~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~ 304 (652)
+. ..|. ++. . | ++..+.... . .....+..|+
T Consensus 234 Gw-----------p~~~---~~~----~-------------~---~~~~~~~~~-------~--------~~~~~~~~P~ 264 (353)
T 2g8s_A 234 GW-----------PLAT---WGI----N-------------Y---SGFKIPEAK-------G--------EIVAGTEQPV 264 (353)
T ss_dssp CT-----------TTBC---SSB----C-------------T---TSSCCTTCC-------B--------SSCTTSCCCS
T ss_pred CC-----------CCcc---CCC----C-------------C---CCCccCccc-------C--------CCCCCccCCe
Confidence 00 0000 000 0 0 000000000 0 0000111122
Q ss_pred eeeeeccccceEEEEEEEc------CCCeEEEeecccccEEEEeccCCcc---eEEeec-cCceeeeEEEccCCEEEEE-
Q psy5768 305 ESIRNSTMMKNIIELSYDY------KRKTLFYSDIQKGTINSVFFNGSNH---RVLLER-QGSVEGLAYEYVHNYLYWT- 373 (652)
Q Consensus 305 ~~~~~~~~~~~~~~v~~D~------~~~~lywsd~~~~~I~~~~~~g~~~---~~i~~~-~~~~~glAvDw~~~~LYwt- 373 (652)
..+.. ...+.+++|.. -.+.+|+++...++|.++.+++... +.++.. ..+|.+|++++.+ .||++
T Consensus 265 ~~~~~---~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG-~lyv~t 340 (353)
T 2g8s_A 265 FYWKD---SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG-YLYVLT 340 (353)
T ss_dssp EEESS---CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS-CEEEEE
T ss_pred EEeCC---CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC-cEEEEE
Confidence 11111 12456677653 2478999999999999999886421 223333 3589999999865 58885
Q ss_pred eCCCCeEEEEE
Q psy5768 374 CNNDATINKID 384 (652)
Q Consensus 374 d~~~~~I~~~~ 384 (652)
|...++|.++.
T Consensus 341 d~~~g~I~ri~ 351 (353)
T 2g8s_A 341 DESSGELLKVS 351 (353)
T ss_dssp CSTTEEEEEEE
T ss_pred eCCCCEEEEEe
Confidence 66778888875
No 62
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.35 E-value=6.8e-11 Score=121.05 Aligned_cols=219 Identities=14% Similarity=0.128 Sum_probs=151.5
Q ss_pred cccceEEEEEEEcCCCeEEEe-------ecccccEEEEeccCCcceEEee-----ccCceeeeEEEccCCEEEEEeCCCC
Q psy5768 311 TMMKNIIELSYDYKRKTLFYS-------DIQKGTINSVFFNGSNHRVLLE-----RQGSVEGLAYEYVHNYLYWTCNNDA 378 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lyws-------d~~~~~I~~~~~~g~~~~~i~~-----~~~~~~glAvDw~~~~LYwtd~~~~ 378 (652)
..+..+.++++| .+++||++ +...+.|+++++.+...+.+.. ....|.+|++|..+++||+++...
T Consensus 15 ~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~- 92 (314)
T 1pjx_A 15 EDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL- 92 (314)
T ss_dssp CCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-
T ss_pred ccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-
Confidence 445667899999 66789999 8778899999865443333332 235799999998768899998743
Q ss_pred eEEEEEcCCCCCccEEE-EEe---CCCCCceEEEEeCCCCEEEEEecCCC-------------CCceEEEeecCCCceEE
Q psy5768 379 TINKIDLDSPKAQRIVV-VRL---GQHDKPRGIDIDSCDSRIYWTNWNSH-------------LPSIQRAFFSGFGTESI 441 (652)
Q Consensus 379 ~I~~~~~~~~~~~~~~~-~~~---~~~~~P~~Iavdp~~g~Lywtd~~~~-------------~~~I~r~~ldG~~~~~l 441 (652)
.|.+++.++. ...+ ... .....|.+|++|| .|.||+++.+.. ...|++...+|.. +.+
T Consensus 93 ~l~~~d~~g~---~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~ 167 (314)
T 1pjx_A 93 GLLVVQTDGT---FEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM-IQV 167 (314)
T ss_dssp EEEEEETTSC---EEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE-EEE
T ss_pred CEEEEeCCCC---EEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCE-EEe
Confidence 7888887631 2222 111 1124689999999 688999986531 1378888877542 222
Q ss_pred EEcCCCCCceEEEe----cCCCEEEEEeCCCCeEEEEecCCCc----eEEEecC--CC-CceeEEEEe-CCEEEEEcCCC
Q psy5768 442 ITTDITMPNALALD----HQAEKLFWGDARLDKIERCDYDGTN----RIVLSKI--SP-LHPFDMAVY-GEFIFWTDWVI 509 (652)
Q Consensus 442 ~~~~l~~P~glaiD----~~~~~LYw~D~~~~~I~~~~ldG~~----~~~l~~~--~~-~~p~glav~-~~~lYwtd~~~ 509 (652)
. ..+..|++++++ ..+++||+++...+.|..+++++.. ++.+... .. ..|.+|+++ ++.||++++..
T Consensus 168 ~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 168 D-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp E-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred c-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 2 345679999999 8878999999988999999976322 1222221 12 579999998 47999999888
Q ss_pred CeEEEEEccCCceEEEEecccCCcceeE
Q psy5768 510 HAVLRANKYTGEEVYTLRKNIRRPMGIV 537 (652)
Q Consensus 510 ~~I~~~~k~~g~~~~~~~~~~~~p~~i~ 537 (652)
+.|.+++..+|+....+......|.++.
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence 9999999876765554443323444444
No 63
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.35 E-value=6.2e-09 Score=107.18 Aligned_cols=179 Identities=10% Similarity=-0.036 Sum_probs=123.1
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCcc-EEEEeC
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR-ETVVSQ 80 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~-~~v~~~ 80 (652)
+++|++...+.|.++|++.......... ....+ ++++++.+++||+++ ...+.|+.+++..... ...+..
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~-~~~~s~dg~~l~~~~--~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEILNQITL------GYDFV-DTAITSDCSNVVVTS--DFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEEC------CCCEE-EEEECSSSCEEEEEE--STTCEEEEEECSSSSCEEEEEEE
T ss_pred EEEEEecCCCeEEEEeCcccceeeeEEc------cCCcc-eEEEcCCCCEEEEEe--CCCCeEEEEECCCCceeEEeccc
Confidence 5788998999999999884444333321 23566 999999999999999 7778999999876543 333444
Q ss_pred CCcCCccCCCCc-EEEEccCCcEEEEeCCC-C--EEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5768 81 KKYPAVTACNLH-IAVDWIAQNIYWSDPKE-N--VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 156 (652)
Q Consensus 81 ~~~~~p~~~~~~-lavDw~~~~lY~~d~~~-~--~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I 156 (652)
+ ..|. . ++++..++.|| +.... + .|.+.+++.......+.. -..|.+++++|...+||.++.+....|
T Consensus 82 ~--~~~~----~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 82 G--QSSM----ADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp C--SSCC----CCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred C--CCCc----cceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceE
Confidence 3 3455 7 99999888898 44434 4 899999976544444443 367999999997778999987643326
Q ss_pred EEEeCCCCCcEEEE----eecccCceeEEEeccCCEEEEEeCCCC
Q psy5768 157 ARAGLDGKKQTILA----QEIIMPIKDITLDLKFFSAFYRNLSKG 197 (652)
Q Consensus 157 ~~~~ldg~~~~~~~----~~~~~~p~gl~lD~~~~~ly~~d~~g~ 197 (652)
...+++......-. ...-..|.++++++.+++||+.+...+
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 66666543322111 111346888888888777887765433
No 64
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=3e-10 Score=115.71 Aligned_cols=241 Identities=12% Similarity=0.097 Sum_probs=161.8
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVA 115 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~ 115 (652)
.+..+.++++|+.++.|||++ ...++|+++++++. .+.+ ... ...|. +|++|. .++||+++...+.|.+.
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~--~~~~~i~~~~~~~~-~~~~-~~~-~~~~~----~l~~~~-dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSD--VRQNRTWAWSDDGQ-LSPE-MHP-SHHQN----GHCLNK-QGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEE--GGGTEEEEEETTSC-EEEE-ESS-CSSEE----EEEECT-TCCEEEEETTTTEEEEE
T ss_pred CCccccCCeEeCCCCEEEEEe--CCCCEEEEEECCCC-eEEE-ECC-CCCcc----eeeECC-CCcEEEEecCCCeEEEE
Confidence 457889999999988899999 77889999999987 4444 334 45678 999997 67799999888899999
Q ss_pred Ec-CCCcEEEEEe-C--CCCCceeEEEcCCCCeEEEEec--CC--------------CCeEEEEeCCCCCcEEEEeeccc
Q psy5768 116 RL-TGQYRYVLIS-G--GVDQPSALAVDPESGYLFWSES--GK--------------IPLIARAGLDGKKQTILAQEIIM 175 (652)
Q Consensus 116 ~~-dg~~~~~l~~-~--~~~~P~~iavd~~~g~lywtd~--~~--------------~~~I~~~~ldg~~~~~~~~~~~~ 175 (652)
++ +|+....... . ....|.++++|| +|.||+||. +. ...|.+.+.+|+. ..+...+.
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~--~~~~~~~~ 172 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL--SAPIRDRV 172 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE--EEEECCCS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCCE--EEeecCCC
Confidence 98 6765433221 1 245789999998 789999875 21 3478888877542 23344577
Q ss_pred CceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecC
Q psy5768 176 PIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNG 255 (652)
Q Consensus 176 ~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~ 255 (652)
.|+||++++.++.| |++...+....+ ...
T Consensus 173 ~~~gi~~s~dg~~l-v~~~~~~~i~~~---------------------------~~~----------------------- 201 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDTGDNATHRY---------------------------CLN----------------------- 201 (296)
T ss_dssp SEEEEEECTTSCEE-EEETTTTEEEEE---------------------------EEC-----------------------
T ss_pred CCccEEECCCCCEE-EEeCCCCeEEEE---------------------------EEC-----------------------
Confidence 89999999887777 877653322211 100
Q ss_pred CCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeeccc
Q psy5768 256 VSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQK 335 (652)
Q Consensus 256 ~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~ 335 (652)
.+|. + -.. ..+ +.. . . ..+.++++|.. ++||+++ .
T Consensus 202 -------------~~g~--------~-~~~-~~~--~~~--~-~--------------~~p~~i~~d~~-G~l~v~~--~ 236 (296)
T 3e5z_A 202 -------------ARGE--------T-EYQ-GVH--FTV--E-P--------------GKTDGLRVDAG-GLIWASA--G 236 (296)
T ss_dssp -------------SSSC--------E-EEE-EEE--ECC--S-S--------------SCCCSEEEBTT-SCEEEEE--T
T ss_pred -------------CCCc--------C-cCC-CeE--eeC--C-C--------------CCCCeEEECCC-CCEEEEc--C
Confidence 0000 0 000 000 000 0 0 11234667765 5688888 6
Q ss_pred ccEEEEeccCCcceEEeeccCceeeeEEE-ccCCEEEEEeCCCCeEEEEEcCCC
Q psy5768 336 GTINSVFFNGSNHRVLLERQGSVEGLAYE-YVHNYLYWTCNNDATINKIDLDSP 388 (652)
Q Consensus 336 ~~I~~~~~~g~~~~~i~~~~~~~~glAvD-w~~~~LYwtd~~~~~I~~~~~~~~ 388 (652)
+.|.+++.+|.....+..... |.+++++ ..++.||.+.. +.+.++++...
T Consensus 237 ~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 237 DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS--TEFWSIETNVR 287 (296)
T ss_dssp TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEET--TEEEEEECSCC
T ss_pred CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC--CeEEEEEcccc
Confidence 789999988765444443444 8999995 66788999875 57888887543
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.34 E-value=2.6e-08 Score=106.67 Aligned_cols=332 Identities=11% Similarity=0.013 Sum_probs=203.4
Q ss_pred CCeeEEE---EECCCCEEEEEeccCC-------cc------eEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCc
Q psy5768 38 SKISSIA---VWPVKGKMFWSNVTKQ-------VV------TIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQN 101 (652)
Q Consensus 38 ~~~~~v~---~d~~~~~lyw~d~~~~-------~~------~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~ 101 (652)
..+..++ +++..+.+|+...... .+ .|++++..+...+.+.....-..|. ++++++ .+.
T Consensus 61 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~----~~~~s~-~~~ 135 (433)
T 3bws_A 61 IALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPK----SVRFID-NTR 135 (433)
T ss_dssp EEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBC----CCEESS-SSE
T ss_pred CccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCce----EEEEeC-CCe
Confidence 3456677 7888888887651111 01 5555555443222221111023355 999998 889
Q ss_pred EEEEeCCCCEEEEEEcCCCcEEEEEe-----CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccC
Q psy5768 102 IYWSDPKENVIEVARLTGQYRYVLIS-----GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMP 176 (652)
Q Consensus 102 lY~~d~~~~~I~v~~~dg~~~~~l~~-----~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~ 176 (652)
+|++....+.|.+.+++......... .....+..+++.+ +|.+|.+... ...|...+++.......+......
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~-d~~v~~~d~~~~~~~~~~~~~~~~ 213 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQ-ANAVHVFDLKTLAYKATVDLTGKW 213 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGG-GTEEEEEETTTCCEEEEEECSSSS
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECC-CCEEEEEECCCceEEEEEcCCCCC
Confidence 99998878889999987544333221 1223566788876 7888888753 467888877654443333333456
Q ss_pred ceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCC
Q psy5768 177 IKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGV 256 (652)
Q Consensus 177 p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~ 256 (652)
|.++++++.+++||......+..+..-.... ..
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~~-------------------------------------------- 246 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTK---LE-------------------------------------------- 246 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTT---EE--------------------------------------------
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCC---cE--------------------------------------------
Confidence 7888888888888777654333222100000 00
Q ss_pred CceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeec---
Q psy5768 257 SAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDI--- 333 (652)
Q Consensus 257 ~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~--- 333 (652)
+.. +. ....+.++++++..+.||.+..
T Consensus 247 --------------------------------~~~---------------~~---~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 247 --------------------------------IRK---------------TD---KIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp --------------------------------EEE---------------CC---CCSEEEEEEECTTSSEEEEEEEESC
T ss_pred --------------------------------EEE---------------ec---CCCCceEEEEcCCCCEEEEEECCCC
Confidence 000 00 0011334445554445555443
Q ss_pred ----ccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEE
Q psy5768 334 ----QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDI 409 (652)
Q Consensus 334 ----~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iav 409 (652)
..+.|+..++..............+.++++++.++.||++....++|.+.++... +.+........|.++++
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~----~~~~~~~~~~~~~~~~~ 352 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK----KVQKSIPVFDKPNTIAL 352 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT----EEEEEEECSSSEEEEEE
T ss_pred ccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC----cEEEEecCCCCCCeEEE
Confidence 2345556665443222222223378899999999999999999999999998642 33333345678999999
Q ss_pred eCCCCEEEEEecCCCC------------CceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecC
Q psy5768 410 DSCDSRIYWTNWNSHL------------PSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD 477 (652)
Q Consensus 410 dp~~g~Lywtd~~~~~------------~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld 477 (652)
+|...+||.+..+... +.|...++........+.. ...|.++++++.++.||.+....+.|...+++
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 9988899999875432 3777777754433333332 35789999999999999998777888888776
Q ss_pred C
Q psy5768 478 G 478 (652)
Q Consensus 478 G 478 (652)
+
T Consensus 432 ~ 432 (433)
T 3bws_A 432 G 432 (433)
T ss_dssp T
T ss_pred C
Confidence 5
No 66
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.34 E-value=9.9e-10 Score=113.97 Aligned_cols=210 Identities=15% Similarity=0.177 Sum_probs=154.7
Q ss_pred ceEEEEEEEcCCCeEEEeecc------cccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQ------KGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~------~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
..+.++++++..++||+++.. .+.|+.+++.+......+.....|.++++++.++.||+++...+.|.++++..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 346789999999999999865 56899998875544444444457999999999999999999889999999864
Q ss_pred CCCccEEEEEeCCCC--------CceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCC
Q psy5768 388 PKAQRIVVVRLGQHD--------KPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAE 459 (652)
Q Consensus 388 ~~~~~~~~~~~~~~~--------~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~ 459 (652)
.. ....+...... .|.+++++|..++||+++++.. ..|...++........+...-..|.+++++++++
T Consensus 121 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 121 GE--VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp CC--EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred Ce--eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-ceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 32 22333332222 3899999999999999997643 3788887765443333331234599999999999
Q ss_pred EEEEEeCCCCeEEEEecCCCceEEEecC----CCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 460 KLFWGDARLDKIERCDYDGTNRIVLSKI----SPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 460 ~LYw~D~~~~~I~~~~ldG~~~~~l~~~----~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
+||.++. .+.|..+++........... ....|.++++. +++||+++...+.|+..+..+++....+.
T Consensus 198 ~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 198 RLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 9999986 57888998876544333332 12357788887 56899999998999999998887666555
No 67
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.33 E-value=1.3e-09 Score=108.33 Aligned_cols=203 Identities=14% Similarity=0.123 Sum_probs=145.4
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc-
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ- 391 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~- 391 (652)
.++.|++||+..++||.+.-..++|++++++|.....+. .+...++|||++. .+.+|.++...+++.++.++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeee
Confidence 578999999999999987666899999999976555554 5667999999984 4567788888899999888653210
Q ss_pred cEEEEEeCCCCCc-----eEEEEeCCCCEEEEEecCCCCCceEEEe--ecCCCceEEEE------cCCCCCceEEEecCC
Q psy5768 392 RIVVVRLGQHDKP-----RGIDIDSCDSRIYWTNWNSHLPSIQRAF--FSGFGTESIIT------TDITMPNALALDHQA 458 (652)
Q Consensus 392 ~~~~~~~~~~~~P-----~~Iavdp~~g~Lywtd~~~~~~~I~r~~--ldG~~~~~l~~------~~l~~P~glaiD~~~ 458 (652)
....+...-...| .|||+||..+.||.+..... ..|++.. +.+...+++-. ..+..+.||++|+.+
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 1112221111334 89999999889999875432 2677765 11222233211 135678999999999
Q ss_pred CEEEEEeCCCCeEEEEecCCCceEEEecC-C-------CCceeEEEEe-CCEEEEEcCCCCeEEEEEccC
Q psy5768 459 EKLFWGDARLDKIERCDYDGTNRIVLSKI-S-------PLHPFDMAVY-GEFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 459 ~~LYw~D~~~~~I~~~~ldG~~~~~l~~~-~-------~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~ 519 (652)
++||........+..+|.+|.-+..+.-. + ..+|-|||++ ++.||++. ..+.+|++.|..
T Consensus 185 g~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~~~~ 253 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFTPQS 253 (255)
T ss_dssp TEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEEC--
T ss_pred CeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEEecC
Confidence 99999999999999999999855544222 1 4689999998 56899995 446889888754
No 68
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.32 E-value=7.1e-10 Score=113.39 Aligned_cols=155 Identities=17% Similarity=0.239 Sum_probs=111.5
Q ss_pred EEEEEEcCCCeEEEeeccc---------------ccEEEEeccCCcceEEeeccCceeeeEEE----ccCCEEEEEeCCC
Q psy5768 317 IELSYDYKRKTLFYSDIQK---------------GTINSVFFNGSNHRVLLERQGSVEGLAYE----YVHNYLYWTCNND 377 (652)
Q Consensus 317 ~~v~~D~~~~~lywsd~~~---------------~~I~~~~~~g~~~~~i~~~~~~~~glAvD----w~~~~LYwtd~~~ 377 (652)
.++++|.. ++||+++... +.|++++.+|. .+.+......|.+++++ ..++.||+++...
T Consensus 120 ~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 120 NDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCCCC-EEEeccCCCCcceEEEecccCCCCCEEEEEECCC
Confidence 34556653 5677777543 57888877643 33444566789999999 8888999999988
Q ss_pred CeEEEEEcCCCCCc---cEEEEEeCCC--CCceEEEEeCCCCEEEEEecCCCCCceEEEeec-CCCceEEEEcCCCCCce
Q psy5768 378 ATINKIDLDSPKAQ---RIVVVRLGQH--DKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS-GFGTESIITTDITMPNA 451 (652)
Q Consensus 378 ~~I~~~~~~~~~~~---~~~~~~~~~~--~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld-G~~~~~l~~~~l~~P~g 451 (652)
++|.+++++.. +. .......... ..|.+|++|+ .|.||+++++.. .|.+.+.+ |.....+ ......|.+
T Consensus 198 ~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~--~i~~~d~~~g~~~~~~-~~~~~~~~~ 272 (314)
T 1pjx_A 198 KKLWSYDIKGP-AKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSS--HIEVFGPDGGQPKMRI-RCPFEKPSN 272 (314)
T ss_dssp TEEEEEEEEET-TEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTT--EEEEECTTCBSCSEEE-ECSSSCEEE
T ss_pred CeEEEEECCCC-CccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCC--EEEEEcCCCCcEeEEE-eCCCCCcee
Confidence 99999987521 11 1122222222 5799999999 689999987643 89998888 6544443 334468999
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEecCC
Q psy5768 452 LALDHQAEKLFWGDARLDKIERCDYDG 478 (652)
Q Consensus 452 laiD~~~~~LYw~D~~~~~I~~~~ldG 478 (652)
++++..+++||+++...+.|.+++++.
T Consensus 273 i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 273 LHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999988888999998888999998874
No 69
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.32 E-value=1.1e-08 Score=106.46 Aligned_cols=289 Identities=12% Similarity=0.084 Sum_probs=175.8
Q ss_pred eEEEecCCC---CeEEEE--ecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEE
Q psy5768 2 FIAVSSPTQ---SKIVVC--NLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRET 76 (652)
Q Consensus 2 ~i~v~~~~~---~~I~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~ 76 (652)
+++|+++.. ..|+++ |.+......+.... ....|.+|+++|. ++||+++.....+.|+.+++++...+.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~-----~~~~p~~~a~spd-g~l~~~~~~~~~~~v~~~~~~~g~~~~ 77 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLA-----ATQNPTYLALSAK-DCLYSVDKEDDEGGIAAWQIDGQTAHK 77 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEE-----ECSCCCCEEECTT-CEEEEEEEETTEEEEEEEEEETTEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeee-----ccCCcceEEEccC-CeEEEEEecCCCceEEEEEecCCcEEE
Confidence 578887653 455555 44323332322111 3468899999985 459998811126789999887654333
Q ss_pred EEe--CCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC--CCcEEEE-EeC-C--------CCCceeEEEcCCC
Q psy5768 77 VVS--QKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT--GQYRYVL-ISG-G--------VDQPSALAVDPES 142 (652)
Q Consensus 77 v~~--~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d--g~~~~~l-~~~-~--------~~~P~~iavd~~~ 142 (652)
+.. .. ...|. +||++..++.||+++...+.|.+.+++ |....+. +.. + ...|..++++|.
T Consensus 78 ~~~~~~~-~~~p~----~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd- 151 (347)
T 3hfq_A 78 LNTVVAP-GTPPA----YVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD- 151 (347)
T ss_dssp EEEEEEE-SCCCS----EEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-
T ss_pred eeeeecC-CCCCE----EEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-
Confidence 322 12 34577 999999888899999878888888875 3432211 111 1 135788999995
Q ss_pred CeEEEEecCCCCeEEEEeCCCCCcEEEEe----ecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecC
Q psy5768 143 GYLFWSESGKIPLIARAGLDGKKQTILAQ----EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPY 218 (652)
Q Consensus 143 g~lywtd~~~~~~I~~~~ldg~~~~~~~~----~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~ 218 (652)
|.||.++.+ ...|...+++......... ..-..|.++++++.+++||+++..++..+.+.. ...
T Consensus 152 g~l~v~~~~-~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~-----------~~~ 219 (347)
T 3hfq_A 152 NRLAVIDLG-SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKY-----------DTQ 219 (347)
T ss_dssp SCEEEEETT-TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE-----------ETT
T ss_pred CcEEEEeCC-CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEe-----------cCC
Confidence 559999876 4577777776222222111 112368899999988889988766443322211 000
Q ss_pred CCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCC
Q psy5768 219 GDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKS 298 (652)
Q Consensus 219 ~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~ 298 (652)
.+ .+ ..+..+.. .+.
T Consensus 220 ---------------------------------------------------~g-------~~------~~~~~~~~-~~~ 234 (347)
T 3hfq_A 220 ---------------------------------------------------TG-------AF------TQLGIVKT-IPA 234 (347)
T ss_dssp ---------------------------------------------------TT-------EE------EEEEEEES-SCT
T ss_pred ---------------------------------------------------CC-------ce------EEeeeeee-cCC
Confidence 00 00 00001110 000
Q ss_pred CCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc-eEEe---eccCceeeeEEEccCCEEEEEe
Q psy5768 299 DLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH-RVLL---ERQGSVEGLAYEYVHNYLYWTC 374 (652)
Q Consensus 299 ~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~-~~i~---~~~~~~~glAvDw~~~~LYwtd 374 (652)
.. .....+.+++|++..+.||+++...+.|...+++.... +.+. .....|.+|++++.++.||.++
T Consensus 235 ~~----------~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 235 DY----------TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp TC----------CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred CC----------CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 00 00123567889998888999988778888887753222 2222 2234699999999999999999
Q ss_pred CCCCeEEEEEcCCCC
Q psy5768 375 NNDATINKIDLDSPK 389 (652)
Q Consensus 375 ~~~~~I~~~~~~~~~ 389 (652)
...+.|.+..++...
T Consensus 305 ~~~~~v~v~~~d~~t 319 (347)
T 3hfq_A 305 QNTDNATLYARDLTS 319 (347)
T ss_dssp TTTTEEEEEEECTTT
T ss_pred cCCCcEEEEEEeCCC
Confidence 988888888765433
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=9e-10 Score=113.92 Aligned_cols=207 Identities=15% Similarity=0.164 Sum_probs=148.5
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCC----CeEEEEEcCCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNND----ATINKIDLDSP 388 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~----~~I~~~~~~~~ 388 (652)
..+.++++|+ +++|||++...+.|+++++++.....+. .....|.+|++|..+ +||++.... +.|.+++.++.
T Consensus 45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSC
T ss_pred ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCC
Confidence 4467888985 5669999988899999998765544444 344679999999765 688887665 68998887654
Q ss_pred CCccEEEEE-eCCCCCceEEEEeCCCCEEEEEecCC----CCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEE
Q psy5768 389 KAQRIVVVR-LGQHDKPRGIDIDSCDSRIYWTNWNS----HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFW 463 (652)
Q Consensus 389 ~~~~~~~~~-~~~~~~P~~Iavdp~~g~Lywtd~~~----~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw 463 (652)
. ...++. ......|.+|+++| .|.+|+++... ....|++...++...+.+. .....|+++++++.+++||+
T Consensus 123 ~--~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 123 N--LQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp S--CEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEE
T ss_pred E--EEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEE
Confidence 3 222322 12346799999999 57899998642 1247888888775554443 34567999999999889999
Q ss_pred EeCCCCeEEEEecC--CCceEE-----EecC-CCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 464 GDARLDKIERCDYD--GTNRIV-----LSKI-SPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 464 ~D~~~~~I~~~~ld--G~~~~~-----l~~~-~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
++...+.|..++++ |..... .... ....|.+|+++ ++.||++++..+.|.+.+. +|+....+.
T Consensus 199 ~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~ 270 (333)
T 2dg1_A 199 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQIL 270 (333)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred EeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEE
Confidence 99888899999994 443322 1111 12479999998 4689999988889999987 565544443
No 71
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.31 E-value=1.5e-09 Score=111.41 Aligned_cols=147 Identities=16% Similarity=0.169 Sum_probs=111.8
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVA 115 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~ 115 (652)
.+..+.+.++++.++.|||+| ...++|++++.+|.. +++ ... ...|. ++++|. .++||+++...+.|.+.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d--~~~~~i~~~~~~g~~-~~~-~~~-~~~~~----gl~~d~-dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSD--LVGRRVLGWREDGTV-DVL-LDA-TAFTN----GNAVDA-QQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEE--TTTTEEEEEETTSCE-EEE-EES-CSCEE----EEEECT-TSCEEEEETTTTEEEEE
T ss_pred CCcCccCCeEeCCCCEEEEEE--CCCCEEEEEeCCCCE-EEE-eCC-CCccc----eeeECC-CCCEEEEECCCCEEEEE
Confidence 456788999999999999999 888999999997662 333 333 45678 999997 56799999888899999
Q ss_pred EcCCCcEEEEEeC---CCCCceeEEEcCCCCeEEEEec--CC--------------CCeEEEEeCCCCCcEEEEeecccC
Q psy5768 116 RLTGQYRYVLISG---GVDQPSALAVDPESGYLFWSES--GK--------------IPLIARAGLDGKKQTILAQEIIMP 176 (652)
Q Consensus 116 ~~dg~~~~~l~~~---~~~~P~~iavd~~~g~lywtd~--~~--------------~~~I~~~~ldg~~~~~~~~~~~~~ 176 (652)
+++|+........ .+..|.++++|| .|.||+||. |. ...|.+.+.++.....+. .+..
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 113 DADGQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp CTTSCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CCCCCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 9998754332111 245799999998 789999974 21 246888887533344333 6778
Q ss_pred ceeEEEeccCCEEEEEeCC
Q psy5768 177 IKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 177 p~gl~lD~~~~~ly~~d~~ 195 (652)
|+||++++.++.||+++..
T Consensus 190 p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp EEEEEECTTSSEEEEEECC
T ss_pred CcceEEcCCCCEEEEEecC
Confidence 9999999999999999875
No 72
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=3.3e-08 Score=104.21 Aligned_cols=271 Identities=12% Similarity=0.113 Sum_probs=179.4
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
+++|+....+.|.++|++........... ..+.++++++.+.+||++. ...+.|+.+++........+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~--~~d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-------SNPMGAVISPDGTKVYVAN--AHSNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEE--GGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-------CCcceEEECCCCCEEEEEC--CCCCeEEEEECCCCeEEEEEECC
Confidence 57888888999999999855444433321 3589999999999999998 67789999998654433334443
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
..+. +++++..++.||++....+.|.+.++........+.. -..|..+++.|...+||++... ...|...++
T Consensus 74 --~~v~----~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~ 145 (391)
T 1l0q_A 74 --SSPQ----GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNG-DKTVSVINT 145 (391)
T ss_dssp --SSEE----EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETT-TTEEEEEET
T ss_pred --CCcc----ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCC-CCEEEEEEC
Confidence 3677 9999988888999998889999999986655444443 3578999999977788888754 456777666
Q ss_pred CCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCC
Q psy5768 162 DGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCG 241 (652)
Q Consensus 162 dg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~ 241 (652)
........+.. -..|.++++++.+++||+.....+.
T Consensus 146 ~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~------------------------------------------- 181 (391)
T 1l0q_A 146 VTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFDSMS------------------------------------------- 181 (391)
T ss_dssp TTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTE-------------------------------------------
T ss_pred CCCcEEEEEec-CCCcceEEECCCCCEEEEEeCCCCE-------------------------------------------
Confidence 54332222221 2345666666655555554433222
Q ss_pred CCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEE
Q psy5768 242 VNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSY 321 (652)
Q Consensus 242 ~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~ 321 (652)
|+..++..+ . ....+.. ...+.++++
T Consensus 182 -----------------------------------------------v~~~d~~~~-~---~~~~~~~---~~~~~~~~~ 207 (391)
T 1l0q_A 182 -----------------------------------------------ISVIDTVTN-S---VIDTVKV---EAAPSGIAV 207 (391)
T ss_dssp -----------------------------------------------EEEEETTTT-E---EEEEEEC---SSEEEEEEE
T ss_pred -----------------------------------------------EEEEECCCC-e---EEEEEec---CCCccceEE
Confidence 111111000 0 0000100 123456677
Q ss_pred EcCCCeEEEeec--ccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 322 DYKRKTLFYSDI--QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 322 D~~~~~lywsd~--~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
++..+.||.+.. ..+.|+..++........+..-..|.++++++.++.||.+....++|.+.++..
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 777777777765 567788777765433333444456889999999999999988889999999864
No 73
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.29 E-value=6.2e-10 Score=114.43 Aligned_cols=210 Identities=14% Similarity=0.105 Sum_probs=143.2
Q ss_pred EEEee--ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccc--cEEEEeccCCcceEEe--ec
Q psy5768 281 IMYSR--VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKG--TINSVFFNGSNHRVLL--ER 354 (652)
Q Consensus 281 Ll~s~--~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~--~I~~~~~~g~~~~~i~--~~ 354 (652)
|++++ ...|.+++. ++. . ...+.. -..+.++++|.. ++||++|...+ +|++++......+.+. ..
T Consensus 45 lyv~d~~~~~I~~~d~-~g~-~---~~~~~~---~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~ 115 (306)
T 2p4o_A 45 IFVTNHEVGEIVSITP-DGN-Q---QIHATV---EGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTVETLLTLPD 115 (306)
T ss_dssp EEEEETTTTEEEEECT-TCC-E---EEEEEC---SSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred EEEEeCCCCeEEEECC-CCc-e---EEEEeC---CCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCC
Confidence 66654 456877775 331 1 112221 146889999876 45999996543 4888775443344444 33
Q ss_pred cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEE---------eCCCCCceEEEEeCCCCEEEEEecCCCC
Q psy5768 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVR---------LGQHDKPRGIDIDSCDSRIYWTNWNSHL 425 (652)
Q Consensus 355 ~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~---------~~~~~~P~~Iavdp~~g~Lywtd~~~~~ 425 (652)
...+.|+++ |.++++|++|...++|++++..+.. .+.... ...+..|.+| +|..++||++|...+
T Consensus 116 ~~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~--~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~- 189 (306)
T 2p4o_A 116 AIFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPS--GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKM- 189 (306)
T ss_dssp CSCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTE--EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTT-
T ss_pred ccccCcccc-cCCCcEEEEECCCCeEEEEeCCCCc--EeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCC-
Confidence 456788886 6788999999988999999975421 111111 1245678998 776789999998854
Q ss_pred CceEEEeecCC----CceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEE-ecCCCCceeEEEEe--
Q psy5768 426 PSIQRAFFSGF----GTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL-SKISPLHPFDMAVY-- 498 (652)
Q Consensus 426 ~~I~r~~ldG~----~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l-~~~~~~~p~glav~-- 498 (652)
+|.+..+++. .++.+.. +..|.||++|.+ ++||+++...++|.+++.+|.-..+. +......|.++++.
T Consensus 190 -~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~d-G~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~ 265 (306)
T 2p4o_A 190 -LLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVE-GNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQT 265 (306)
T ss_dssp -EEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTT-CCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCS
T ss_pred -EEEEEEeCCCCCCCccEEEec--cCCCCCeEECCC-CCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecc
Confidence 8999999852 2333332 468999999976 58999999999999999987543321 22235789999996
Q ss_pred ---CCEEEEEcCCC
Q psy5768 499 ---GEFIFWTDWVI 509 (652)
Q Consensus 499 ---~~~lYwtd~~~ 509 (652)
+++||+++...
T Consensus 266 ~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 266 EGDCTAIYVVTNGG 279 (306)
T ss_dssp TTTTTEEEEEECTT
T ss_pred cCCCCEEEEECCCC
Confidence 36999998764
No 74
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.28 E-value=3.9e-10 Score=118.51 Aligned_cols=207 Identities=12% Similarity=0.083 Sum_probs=144.0
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEE-------eeccCceeeeEEEcc---CCEEEEEeCC----
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVL-------LERQGSVEGLAYEYV---HNYLYWTCNN---- 376 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i-------~~~~~~~~glAvDw~---~~~LYwtd~~---- 376 (652)
..+..+.+|++++...+||+++.. ++|+++..+|...+.+ ..+...+.|||+++. ++.||+++..
T Consensus 15 ~~l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 15 DKLDHPWALAFLPDNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp EEESSEEEEEECSTTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 346788999999865449999974 8999998766432211 134557899999986 8999999764
Q ss_pred ---CCeEEEEEcCCCCCc---cEEEEEe-C----CCCCceEEEEeCCCCEEEEEecCC-----------CCCceEEEeec
Q psy5768 377 ---DATINKIDLDSPKAQ---RIVVVRL-G----QHDKPRGIDIDSCDSRIYWTNWNS-----------HLPSIQRAFFS 434 (652)
Q Consensus 377 ---~~~I~~~~~~~~~~~---~~~~~~~-~----~~~~P~~Iavdp~~g~Lywtd~~~-----------~~~~I~r~~ld 434 (652)
..+|.+++++..... .++++.. . ....|.+|+++| .|+||++.... ..++|.|.+.|
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 357888887643221 2333332 1 235588999999 68999997432 13589999999
Q ss_pred CCC------------ceEEEEcCCCCCceEEEecCCCEEEEEeCCCC---eEEEEecCCCc-------------------
Q psy5768 435 GFG------------TESIITTDITMPNALALDHQAEKLFWGDARLD---KIERCDYDGTN------------------- 480 (652)
Q Consensus 435 G~~------------~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~---~I~~~~ldG~~------------------- 480 (652)
|+- ...++...+..|.||++|+.+++||.+|.+.+ .|..+.- |.+
T Consensus 173 G~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 173 GEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp SCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCCCCCccCc
Confidence 971 33455668889999999998899999998754 3433321 111
Q ss_pred -----------eEEEecCCCCceeEEEEe--------CCEEEEEcCCCCeEEEEEccCCc
Q psy5768 481 -----------RIVLSKISPLHPFDMAVY--------GEFIFWTDWVIHAVLRANKYTGE 521 (652)
Q Consensus 481 -----------~~~l~~~~~~~p~glav~--------~~~lYwtd~~~~~I~~~~k~~g~ 521 (652)
+..... ....|.|++++ .+.+|++++..+.|+++...+++
T Consensus 252 ~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~ 310 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDK 310 (353)
T ss_dssp CCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTE
T ss_pred ccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCe
Confidence 000001 11368899996 47999999999999999876553
No 75
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=2.6e-10 Score=119.31 Aligned_cols=217 Identities=11% Similarity=0.016 Sum_probs=141.9
Q ss_pred ceEEEEEEEcCCCeEEEeecc--cc--cEEEEeccCCcceEE-------eeccCceeeeEEEccCCEEEEEeCC-----C
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQ--KG--TINSVFFNGSNHRVL-------LERQGSVEGLAYEYVHNYLYWTCNN-----D 377 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~--~~--~I~~~~~~g~~~~~i-------~~~~~~~~glAvDw~~~~LYwtd~~-----~ 377 (652)
..+.++++++. +++|++... .+ +|..++ +|.. ... ...+..|.||++|.. ++|||+|.. .
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~-~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELT-QDGL-IPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEE-TTEE-EESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSC
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEEC-CCCe-ecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCC
Confidence 36789999864 689998642 23 777777 5421 100 024568999999986 679999976 5
Q ss_pred CeEEEEEcCCCCCccEEEEEeC-----CCCCceEEEEeCCCCEEEEEecCC-CCCceEEEeecCCCceEEEE--------
Q psy5768 378 ATINKIDLDSPKAQRIVVVRLG-----QHDKPRGIDIDSCDSRIYWTNWNS-HLPSIQRAFFSGFGTESIIT-------- 443 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~~-----~~~~P~~Iavdp~~g~Lywtd~~~-~~~~I~r~~ldG~~~~~l~~-------- 443 (652)
.+|.++++.... ....+... ....|.+|++||..|++|++|.+. ....|.+.+++......++.
T Consensus 93 ~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 93 PKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp CEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 789999975321 12223322 124679999999889999999721 02366666665222111110
Q ss_pred ------cC---------------CCCCceEEEecCCCEEEEEeCCCCeEEEEecC----CC--ce------EEEecCCCC
Q psy5768 444 ------TD---------------ITMPNALALDHQAEKLFWGDARLDKIERCDYD----GT--NR------IVLSKISPL 490 (652)
Q Consensus 444 ------~~---------------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld----G~--~~------~~l~~~~~~ 490 (652)
.. ...|+||+++++++.||+++....+|++++.+ +. +. ..+. ...
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--~~g 248 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS--EKP 248 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE--ECC
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc--cCC
Confidence 00 02479999999999999999988899999853 21 11 1111 124
Q ss_pred ceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEecc-cCCcceeEE
Q psy5768 491 HPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLRKN-IRRPMGIVA 538 (652)
Q Consensus 491 ~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~~-~~~p~~i~~ 538 (652)
.|.||+++ ++.||++++..++|.+.+..+|+...+.... +..|.++++
T Consensus 249 ~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 249 ICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp SCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred CCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 79999998 5799999999999999998556533333222 345656554
No 76
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.28 E-value=2.1e-08 Score=104.90 Aligned_cols=179 Identities=9% Similarity=0.033 Sum_probs=120.9
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCc-------c------eEEe-eccCceeeeEEEccCCEEEEEeCCCCeE
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-------H------RVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATI 380 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~-------~------~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I 380 (652)
.+.++++++..+.||+++...+.|....++... . ..+. .....|.++++++.++.||.++...++|
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 367788999888999999888888877766432 1 1112 3445799999999999999999888999
Q ss_pred EEEEcCCCCCccEEEEEe----CCCCCceEEEEeCCCCEEEEEecC-CCCCceEEEeec--CCCceEEEEc-CCCCCceE
Q psy5768 381 NKIDLDSPKAQRIVVVRL----GQHDKPRGIDIDSCDSRIYWTNWN-SHLPSIQRAFFS--GFGTESIITT-DITMPNAL 452 (652)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~----~~~~~P~~Iavdp~~g~Lywtd~~-~~~~~I~r~~ld--G~~~~~l~~~-~l~~P~gl 452 (652)
.+.+++.. ....+... .....|.+|+++|...+||.++.+ .. .|....++ ....+.+... .-..|.++
T Consensus 236 ~v~~~~~g--~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~--~i~v~~~~~~~g~~~~~~~~~~g~~~~~~ 311 (361)
T 3scy_A 236 IAFRYADG--MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD--GVAIFKVDETNGTLTKVGYQLTGIHPRNF 311 (361)
T ss_dssp EEEEEETT--EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC--EEEEEEECTTTCCEEEEEEEECSSCCCEE
T ss_pred EEEEecCC--ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC--EEEEEEEcCCCCcEEEeeEecCCCCCceE
Confidence 99988632 12222211 123568899999998999999877 43 55555554 2222222211 13479999
Q ss_pred EEecCCCEEEEEeCCCCeEEEEecC--CCceEEEecC-CCCceeEEEE
Q psy5768 453 ALDHQAEKLFWGDARLDKIERCDYD--GTNRIVLSKI-SPLHPFDMAV 497 (652)
Q Consensus 453 aiD~~~~~LYw~D~~~~~I~~~~ld--G~~~~~l~~~-~~~~p~glav 497 (652)
++++++++||.+....+.|....+| ....+.+... ....|..|++
T Consensus 312 ~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 312 IITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 9999999999999887887775555 3333333211 2456776654
No 77
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.27 E-value=1.1e-09 Score=113.77 Aligned_cols=224 Identities=17% Similarity=0.133 Sum_probs=154.6
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-------eccCceeeeEEEc---cCCEEEEEeC--CCC
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-------ERQGSVEGLAYEY---VHNYLYWTCN--NDA 378 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-------~~~~~~~glAvDw---~~~~LYwtd~--~~~ 378 (652)
.++..+.+|++.+. ++||+++...++|+++..++...+.+. .+...+.|||+++ .++.||++.+ ..+
T Consensus 29 ~gL~~P~~ia~~pd-G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 29 TGLNSPWGLAPLPG-GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred cCCCCceEEEEcCC-CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 56788999999975 679999987899999986543333221 4567899999998 4789998653 457
Q ss_pred eEEEEEcCCCC-----C-ccEEEEE-e--CCCCCceEEEEeCCCCEEEEEecC-----------CCCCceEEEeecCC--
Q psy5768 379 TINKIDLDSPK-----A-QRIVVVR-L--GQHDKPRGIDIDSCDSRIYWTNWN-----------SHLPSIQRAFFSGF-- 436 (652)
Q Consensus 379 ~I~~~~~~~~~-----~-~~~~~~~-~--~~~~~P~~Iavdp~~g~Lywtd~~-----------~~~~~I~r~~ldG~-- 436 (652)
+|.++.+++.. . ..++++. + ........|+++| .|+||++... ...++|.|.+.||+
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 89999887621 1 1344443 2 2345678899999 6899999431 22469999999998
Q ss_pred ------CceEEEEcCCCCCceEEEecCCCEEEEEeCCCC---eEEEEecCCCce-----------------EEEecCCCC
Q psy5768 437 ------GTESIITTDITMPNALALDHQAEKLFWGDARLD---KIERCDYDGTNR-----------------IVLSKISPL 490 (652)
Q Consensus 437 ------~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~---~I~~~~ldG~~~-----------------~~l~~~~~~ 490 (652)
.. .++...+..|.||++|+ .++||.+|.+.+ .|..+. .|.+- .........
T Consensus 187 ~~nPf~~~-~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 187 PGNPFPGS-PVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp TTCSSTTC-CEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred CCCCCCCC-eEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 43 45667899999999998 589999998764 444443 33220 011111113
Q ss_pred ceeEEEEeCCEEEEEcCCCCeEEEEEccCCce---EEEEecc-cCCcceeEEE
Q psy5768 491 HPFDMAVYGEFIFWTDWVIHAVLRANKYTGEE---VYTLRKN-IRRPMGIVAI 539 (652)
Q Consensus 491 ~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~---~~~~~~~-~~~p~~i~~~ 539 (652)
.|.||+++++.+|.......+|+++....+.. .+.+..+ ..+|.+|.+-
T Consensus 264 ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~ 316 (347)
T 3das_A 264 SPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPA 316 (347)
T ss_dssp CEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEE
T ss_pred CCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEEC
Confidence 68999999999999999999999987654321 1233323 2566666554
No 78
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.27 E-value=1.5e-09 Score=112.54 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=143.4
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccE
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRI 393 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~ 393 (652)
..+.+..+|+.++.+||+|...+.|++++.++.....+. .-..|.+|+++.. +++|++. ...|.+++..+.. .+
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~d-g~l~v~~--~~gl~~~d~~~g~--~~ 122 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISD-SKQLIAS--DDGLFLRDTATGV--LT 122 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEET-TEEEEEE--TTEEEEEETTTCC--EE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCC-CeEEEEE--CCCEEEEECCCCc--EE
Confidence 346788999999999999999999999998875443332 2347899999975 4566665 3458888875422 22
Q ss_pred EEEEeCC---CCCceEEEEeCCCCEEEEEecCC----CCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC
Q psy5768 394 VVVRLGQ---HDKPRGIDIDSCDSRIYWTNWNS----HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466 (652)
Q Consensus 394 ~~~~~~~---~~~P~~Iavdp~~g~Lywtd~~~----~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~ 466 (652)
.+..... ...|.++++|| .|.+|+++.+. ....|++.. +|.. +.+ ...+..|++|+++++++.|||++.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~-~~~-~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKV-TKL-FADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEE-EEE-EEEESSEEEEEECTTSCEEEEEET
T ss_pred EEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcE-EEe-eCCCcccCCeEEcCCCCEEEEEEC
Confidence 2222111 24688999999 57788887642 124788887 5532 222 334567999999999999999999
Q ss_pred CCCeEEEEecC---C-C--ceEEEec--CCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 467 RLDKIERCDYD---G-T--NRIVLSK--ISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 467 ~~~~I~~~~ld---G-~--~~~~l~~--~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
..+.|..++++ | . +++.+.. .....|.+++++ ++.||++.+..+.|.+++. +|+....+.
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 88999999986 4 2 2334432 123679999998 5689999998889999998 666555554
No 79
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.25 E-value=8.4e-08 Score=106.71 Aligned_cols=352 Identities=10% Similarity=0.092 Sum_probs=220.9
Q ss_pred EEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEE--Ee
Q psy5768 94 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL--AQ 171 (652)
Q Consensus 94 avDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~--~~ 171 (652)
++|+ .+.+|++....+.|.+.+.+.......+..+. .|+.++++|...+||.++.+ ..|...+++......+ +.
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d--~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRD--ARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETT--SEEEEEETTSSSCEEEEEEE
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCC--CeEEEEECcCCCCcEEEEEe
Confidence 4676 56899999889999999987544434444333 39999999988899999875 6888888842222211 22
Q ss_pred ecccCceeEEEec----cCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCC
Q psy5768 172 EIIMPIKDITLDL----KFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGC 247 (652)
Q Consensus 172 ~~~~~p~gl~lD~----~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~C 247 (652)
.-..|.++++++ .+++||..++..+....+ +...
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~---------------------------D~~t-------------- 257 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM---------------------------DGET-------------- 257 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEE---------------------------ETTT--------------
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEE---------------------------eccc--------------
Confidence 134789999998 889999887643333221 1000
Q ss_pred cccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCe
Q psy5768 248 AELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKT 327 (652)
Q Consensus 248 s~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~ 327 (652)
...+..+.+ .+..... ..... -..+.++.+.+..+.
T Consensus 258 --------------------------------------~~~~~~i~~-~g~~~~~--~~~~~---~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 258 --------------------------------------LEPKQIVST-RGMTVDT--QTYHP---EPRVAAIIASHEHPE 293 (543)
T ss_dssp --------------------------------------CCEEEEEEC-CEECSSS--CCEES---CCCEEEEEECSSSSE
T ss_pred --------------------------------------cccceeecc-cCcccCc--ccccc---CCceEEEEECCCCCE
Confidence 000001111 0000000 00000 013556777777788
Q ss_pred EEEeecccccEEEEeccCCcceE--EeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCc-
Q psy5768 328 LFYSDIQKGTINSVFFNGSNHRV--LLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKP- 404 (652)
Q Consensus 328 lywsd~~~~~I~~~~~~g~~~~~--i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P- 404 (652)
+|++....++|..++........ .+..-..|.++++|+.++.||.+....++|.++++... +.+..+.....|
T Consensus 294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg----~l~~~i~~g~~ph 369 (543)
T 1nir_A 294 FIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR----RLSALVDVGKTPH 369 (543)
T ss_dssp EEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT----EEEEEEECSSSBC
T ss_pred EEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC----eEEEeeccCCCCC
Confidence 88888888888888875422211 22333479999999999999999988899999987642 333222222333
Q ss_pred --eEEE-EeCCCCEEEEEecCCCCCceEEEeecCCC-----ceEEE--EcCCCCCceEEEecCCCEEEEEeC------CC
Q psy5768 405 --RGID-IDSCDSRIYWTNWNSHLPSIQRAFFSGFG-----TESII--TTDITMPNALALDHQAEKLFWGDA------RL 468 (652)
Q Consensus 405 --~~Ia-vdp~~g~Lywtd~~~~~~~I~r~~ldG~~-----~~~l~--~~~l~~P~glaiD~~~~~LYw~D~------~~ 468 (652)
+++. ++|..|.+|.|..... ..|....++..+ .+++- ...-..+..+++.+.+++||.... ..
T Consensus 370 ~g~g~~~~~p~~g~~~~s~~~~d-~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~ 448 (543)
T 1nir_A 370 PGRGANFVHPKYGPVWSTSHLGD-GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARIS 448 (543)
T ss_dssp CTTCEEEEETTTEEEEEEEBSSS-SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHH
T ss_pred CCCCcccCCCCCccEEEeccCCC-ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccC
Confidence 3444 4787799998875222 267767776421 22222 222235677999999888887642 14
Q ss_pred CeEEEEecCCCce--EEEe-------cCCCCceeEEEEe--CCEEEEEcCC----CCeEEEEEccCCceEEEEec-ccCC
Q psy5768 469 DKIERCDYDGTNR--IVLS-------KISPLHPFDMAVY--GEFIFWTDWV----IHAVLRANKYTGEEVYTLRK-NIRR 532 (652)
Q Consensus 469 ~~I~~~~ldG~~~--~~l~-------~~~~~~p~glav~--~~~lYwtd~~----~~~I~~~~k~~g~~~~~~~~-~~~~ 532 (652)
+.|..+|.+.... +++. ......+..+++. +++||++.|. .+.|...|..|++..+++.. .+..
T Consensus 449 ~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~ 528 (543)
T 1nir_A 449 QSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLIT 528 (543)
T ss_dssp TCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCS
T ss_pred ceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCCccC
Confidence 5899999875443 3331 1223678888885 6799999883 58899999999998888874 3467
Q ss_pred cceeEEEe
Q psy5768 533 PMGIVAIS 540 (652)
Q Consensus 533 p~~i~~~~ 540 (652)
|.|..-+.
T Consensus 529 p~g~~~~~ 536 (543)
T 1nir_A 529 PTGKFNVY 536 (543)
T ss_dssp EEEEEEHH
T ss_pred CCeeeecc
Confidence 87766544
No 80
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.25 E-value=6.7e-08 Score=101.85 Aligned_cols=281 Identities=11% Similarity=0.110 Sum_probs=186.2
Q ss_pred CcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCcee
Q psy5768 100 QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKD 179 (652)
Q Consensus 100 ~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~g 179 (652)
+.+|++....+.|.+.+++.......+.. ...|..+++.|...+||++... ...|...++........+... ..+.+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~-d~~i~v~d~~~~~~~~~~~~~-~~v~~ 78 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAH-SNDVSIIDTATNNVIATVPAG-SSPQG 78 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGG-GTEEEEEETTTTEEEEEEECS-SSEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeec-CCCcceEEECCCCCEEEEECCC-CCeEEEEECCCCeEEEEEECC-CCccc
Confidence 46888888889999999876544444443 3569999999987789998753 457777776543332222222 36777
Q ss_pred EEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCce
Q psy5768 180 ITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAV 259 (652)
Q Consensus 180 l~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~ 259 (652)
+++++.+++||+...+.+..+. |+..
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v---------------------------~d~~--------------------------- 104 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSV---------------------------IDTT--------------------------- 104 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEE---------------------------EETT---------------------------
T ss_pred eEECCCCCEEEEEECCCCEEEE---------------------------EECC---------------------------
Confidence 7777777777766544222211 1100
Q ss_pred EEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEE
Q psy5768 260 CACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTIN 339 (652)
Q Consensus 260 C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~ 339 (652)
.+ ..+..+.. -..+.++++++..+.||++....+.|+
T Consensus 105 ----------~~---------------~~~~~~~~------------------~~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 105 ----------SN---------------TVAGTVKT------------------GKSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp ----------TT---------------EEEEEEEC------------------SSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ----------CC---------------eEEEEEeC------------------CCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 00 00000010 012456777777778888887778888
Q ss_pred EEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEE
Q psy5768 340 SVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT 419 (652)
Q Consensus 340 ~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywt 419 (652)
..++........+..-..|.++++++.++.||.+....+.|.+.++... +.+........|.+++++|...+||.+
T Consensus 142 ~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 142 VINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----SVIDTVKVEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp EEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEECSSEEEEEEECTTSSEEEEE
T ss_pred EEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC----eEEEEEecCCCccceEECCCCCEEEEE
Confidence 8887654443444444578999999999999999988899999998652 222223345688999999988899998
Q ss_pred ecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEe
Q psy5768 420 NWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLS 485 (652)
Q Consensus 420 d~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~ 485 (652)
........|...++........+.. -..|.++++++.+++||.+....+.|...++........+
T Consensus 218 ~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 218 NVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ecCcCCCcEEEEECCCCeEEEEEec-CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 8632234788777765443333332 2468899999999999999888889999999765443333
No 81
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=5.1e-10 Score=117.05 Aligned_cols=192 Identities=16% Similarity=0.199 Sum_probs=135.2
Q ss_pred cceEEEEEEEcCCCeEEEeecc-----cccEEEEeccCCc-ceEEe-e-c----cCceeeeEEEccCCEEEEEeC---CC
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQ-----KGTINSVFFNGSN-HRVLL-E-R----QGSVEGLAYEYVHNYLYWTCN---ND 377 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~-----~~~I~~~~~~g~~-~~~i~-~-~----~~~~~glAvDw~~~~LYwtd~---~~ 377 (652)
+..+.++++|.. ++|||+|.. ..+|.++++.... ...+. . . ...+.+||+|..++.+|++|. ..
T Consensus 66 ~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 66 FDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred eeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 356789999987 789999976 4789999987433 23332 1 1 135799999988899999998 77
Q ss_pred CeEEEEEcCCCCCccEEEEEe-------------C---------------CCCCceEEEEeCCCCEEEEEecCCCCCceE
Q psy5768 378 ATINKIDLDSPKAQRIVVVRL-------------G---------------QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQ 429 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~-------------~---------------~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~ 429 (652)
+.|.++++.... ...++.. . ....|.+||++|..+.||+++.... +|+
T Consensus 145 ~~i~v~d~~~g~--~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~--~l~ 220 (343)
T 2qe8_A 145 AALIRVDLQTGL--AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST--SMY 220 (343)
T ss_dssp CEEEEEETTTCC--EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS--EEE
T ss_pred CeEEEEECCCCC--EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC--eEE
Confidence 889999875321 1111100 0 0135799999998889999998753 888
Q ss_pred EEeec----CCC--ce-----EEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEec-CCCceEEEecC-CCCceeEEE
Q psy5768 430 RAFFS----GFG--TE-----SIITTDITMPNALALDHQAEKLFWGDARLDKIERCDY-DGTNRIVLSKI-SPLHPFDMA 496 (652)
Q Consensus 430 r~~ld----G~~--~~-----~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~l-dG~~~~~l~~~-~~~~p~gla 496 (652)
+...+ +.. .+ .... ....|.||++|.+ ++||+++...+.|.+++. +|. ..++... .+..|.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va 297 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKD-HNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFN 297 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTT-CCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEE
T ss_pred EEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCC-CCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeE
Confidence 88753 211 10 1111 2347999999975 799999999999999999 775 3444432 257899999
Q ss_pred Ee-CCEEEEEcCCCCeE
Q psy5768 497 VY-GEFIFWTDWVIHAV 512 (652)
Q Consensus 497 v~-~~~lYwtd~~~~~I 512 (652)
+. ++.||+++...+.+
T Consensus 298 ~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 298 FGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp ECTTSCEEEEECCGGGS
T ss_pred ECCCCcEEEEeCccccc
Confidence 97 57899998766543
No 82
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.23 E-value=1.4e-08 Score=104.83 Aligned_cols=149 Identities=10% Similarity=0.029 Sum_probs=110.0
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCC----CE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKE----NV 111 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~----~~ 111 (652)
....+.++++++ +++|||++ ...+.|+++++++.....+.... ...|. +|++|. .++||++.... +.
T Consensus 43 ~~~~~~~~~~~~-~g~l~~~~--~~~~~i~~~d~~~~~~~~~~~~~-~~~~~----~i~~~~-dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 43 KGLQLEGLNFDR-QGQLFLLD--VFEGNIFKINPETKEIKRPFVSH-KANPA----AIKIHK-DGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp SCCCEEEEEECT-TSCEEEEE--TTTCEEEEECTTTCCEEEEEECS-SSSEE----EEEECT-TSCEEEEECTTSSSCCE
T ss_pred cCccccCcEECC-CCCEEEEE--CCCCEEEEEeCCCCcEEEEeeCC-CCCcc----eEEECC-CCcEEEEeCCCCCCCce
Confidence 345789999996 56799999 77789999998876555544333 35677 999996 56799988655 68
Q ss_pred EEEEEcCCCcEEEEEeC--CCCCceeEEEcCCCCeEEEEecCC-----CCeEEEEeCCCCCcEEEEeecccCceeEEEec
Q psy5768 112 IEVARLTGQYRYVLISG--GVDQPSALAVDPESGYLFWSESGK-----IPLIARAGLDGKKQTILAQEIIMPIKDITLDL 184 (652)
Q Consensus 112 I~v~~~dg~~~~~l~~~--~~~~P~~iavd~~~g~lywtd~~~-----~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~ 184 (652)
|.+.++++.....++.. ....|.+|++|| +|.+|+++... ...|.+.+.++.....+. ..+..|+++++++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALST 191 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECT
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECC
Confidence 99999988765544331 235799999998 68999998631 357888888765544443 3456799999999
Q ss_pred cCCEEEEEeCC
Q psy5768 185 KFFSAFYRNLS 195 (652)
Q Consensus 185 ~~~~ly~~d~~ 195 (652)
.+++||+.+..
T Consensus 192 dg~~l~v~~~~ 202 (333)
T 2dg1_A 192 DEKVLWVTETT 202 (333)
T ss_dssp TSSEEEEEEGG
T ss_pred CCCEEEEEeCC
Confidence 88889988754
No 83
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.19 E-value=2.1e-12 Score=103.21 Aligned_cols=61 Identities=23% Similarity=0.420 Sum_probs=53.5
Q ss_pred cccCCCceeec-cCeecCCccCCCCCCCCCCCCCCCC-CCCC-CCCCCCCeeecCC--CCcccCCC
Q psy5768 591 TVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGI-LYCA-MRDCRPGYFKCDN--NKCILSSH 651 (652)
Q Consensus 591 ~~C~~~~f~C~-~g~Ci~~~~~Cd~~~dC~d~sde~~-~~C~-~~~C~~~~f~C~~--~~Ci~~~~ 651 (652)
..|.+.+|+|. +|.|||..|+|||+.||.|||||.. ..|. ..+|.+.+|+|.+ ++||+..+
T Consensus 7 ~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~ 72 (80)
T 2kny_A 7 KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHL 72 (80)
T ss_dssp CCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTT
T ss_pred CCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHH
Confidence 56888999998 5899999999999999999999975 3576 4789999999998 79998754
No 84
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.19 E-value=7.5e-08 Score=100.61 Aligned_cols=203 Identities=12% Similarity=0.118 Sum_probs=134.5
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCcc-----eEEe-ec---------cCceeeeEEEccCCEEEEEeCCCCeE
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH-----RVLL-ER---------QGSVEGLAYEYVHNYLYWTCNNDATI 380 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~-----~~i~-~~---------~~~~~glAvDw~~~~LYwtd~~~~~I 380 (652)
+..+++ ..+.||.++...+.|...+++.... ..+. .+ ...|.++++++.++.||.++...+.|
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 344555 4556777777667777776643211 1111 11 22458899999999999999988999
Q ss_pred EEEEcCCCCC----c-c--E---EEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-----C
Q psy5768 381 NKIDLDSPKA----Q-R--I---VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-----D 445 (652)
Q Consensus 381 ~~~~~~~~~~----~-~--~---~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-----~ 445 (652)
.+.+++...+ . . . ..........|++++++|...+||+++.... .|....++....+.+... .
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~~~~~g~~~~~~~~~~~~~~ 257 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG--TVIAFRYADGMLDEIQTVAADTVN 257 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC--EEEEEEEETTEEEEEEEEESCSSC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC--eEEEEEecCCceEEeEEEecCCCC
Confidence 9888875432 1 0 1 2334455678999999998889999986543 677777764332222211 1
Q ss_pred CCCCceEEEecCCCEEEEEeCC-CCeEEEEecC--CCceEEE--ecCCCCceeEEEEe--CCEEEEEcCCCCeEEE--EE
Q psy5768 446 ITMPNALALDHQAEKLFWGDAR-LDKIERCDYD--GTNRIVL--SKISPLHPFDMAVY--GEFIFWTDWVIHAVLR--AN 516 (652)
Q Consensus 446 l~~P~glaiD~~~~~LYw~D~~-~~~I~~~~ld--G~~~~~l--~~~~~~~p~glav~--~~~lYwtd~~~~~I~~--~~ 516 (652)
...|.+|++++++++||.++.. .+.|...+++ ....+.+ ... ...|.++++. +.+||.++...+.|.. ++
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 2357799999999999999988 7888887775 2232222 222 3578999987 5689999987776544 67
Q ss_pred ccCCceE
Q psy5768 517 KYTGEEV 523 (652)
Q Consensus 517 k~~g~~~ 523 (652)
..+|+..
T Consensus 337 ~~~g~~~ 343 (361)
T 3scy_A 337 QATGLLT 343 (361)
T ss_dssp TTTCCEE
T ss_pred CCCCcEe
Confidence 6666543
No 85
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.18 E-value=7.1e-08 Score=103.16 Aligned_cols=292 Identities=14% Similarity=0.118 Sum_probs=186.3
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeC----CCcCCccCCCCcEEEEccCCcEEEEeCCCCEEE
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ----KKYPAVTACNLHIAVDWIAQNIYWSDPKENVIE 113 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~----~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~ 113 (652)
..+.++++++ ++++|++. ...+.|+.+++........+.. +....+. +++++. .+++|++....+.|.
T Consensus 123 ~~~~~~~~s~-~~~~~~~~--~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~----~~~~~~-~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPL--LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE----TISIPE-HNELWVSQMQANAVH 194 (433)
T ss_dssp SCBCCCEESS-SSEEEEEB--TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE----EEEEGG-GTEEEEEEGGGTEEE
T ss_pred CCceEEEEeC-CCeEEEEe--CCCCeEEEEECCCCeEeeecCcccccccCCcee----EEEEcC-CCEEEEEECCCCEEE
Confidence 3567899998 89999988 6677899999885443332221 1023455 678753 678889988889999
Q ss_pred EEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEe
Q psy5768 114 VARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRN 193 (652)
Q Consensus 114 v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d 193 (652)
+.+++.......+......|..++++|...+||.+... ...|...++........+.. -..|.++++++.+++||...
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI-SEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT-TTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEE
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-CCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEE
Confidence 99987654444444445689999999988899998753 45788877754333222221 23467777777666666554
Q ss_pred CCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCc
Q psy5768 194 LSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKS 273 (652)
Q Consensus 194 ~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~ 273 (652)
..++...
T Consensus 273 ~~~~~~~------------------------------------------------------------------------- 279 (433)
T 3bws_A 273 FSASNQE------------------------------------------------------------------------- 279 (433)
T ss_dssp EESCTTC-------------------------------------------------------------------------
T ss_pred CCCCccc-------------------------------------------------------------------------
Confidence 3211100
Q ss_pred ccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee
Q psy5768 274 CSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE 353 (652)
Q Consensus 274 C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~ 353 (652)
.....|+..++..+ . ....+.. ...+.+++|++..+.||++....+.|...++++......+.
T Consensus 280 ----------~~dg~i~~~d~~~~-~---~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 280 ----------SGGGRLGIYSMDKE-K---LIDTIGP---PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp ----------SCCEEEEEEETTTT-E---EEEEEEE---EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ----------cCCCeEEEEECCCC-c---EEeeccC---CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 00011111121000 0 0001100 02345678888888899998888899999887544444444
Q ss_pred ccCceeeeEEEccCCEEEEEeCCC--------------CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEE
Q psy5768 354 RQGSVEGLAYEYVHNYLYWTCNND--------------ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT 419 (652)
Q Consensus 354 ~~~~~~glAvDw~~~~LYwtd~~~--------------~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywt 419 (652)
....|.++++++.++.||.+.... +.|.+.++... +.+........|.+++++|...+||.+
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD----TVKEFWEAGNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT----EEEEEEECSSSEEEEEECTTSCEEEEE
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC----cEEEEecCCCCCceEEEcCCCCEEEEE
Confidence 556789999999999999998764 48998887542 233333345789999999988899988
Q ss_pred ecCCCCCceEEEeecC
Q psy5768 420 NWNSHLPSIQRAFFSG 435 (652)
Q Consensus 420 d~~~~~~~I~r~~ldG 435 (652)
..... .|....+++
T Consensus 419 ~~~d~--~i~v~~~~~ 432 (433)
T 3bws_A 419 DFLDH--QIRVYRRDG 432 (433)
T ss_dssp ETTTT--EEEEEEETT
T ss_pred ECCCC--eEEEEEecC
Confidence 76433 666555554
No 86
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.13 E-value=8.9e-07 Score=98.66 Aligned_cols=355 Identities=13% Similarity=0.086 Sum_probs=207.5
Q ss_pred EEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC-CCCcEE-EEe
Q psy5768 94 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTI-LAQ 171 (652)
Q Consensus 94 avDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld-g~~~~~-~~~ 171 (652)
..|+ .+.+|++....+.|.++|.+.......+..+ ..|+++++.|...+||.++. ...|...++. ++...+ -+.
T Consensus 162 ~~d~-~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~--dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 162 DWDL-ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR--DGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp CCCG-GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET--TSEEEEEETTSSSCCEEEEEE
T ss_pred ccCC-CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcC--CCeEEEEECCCCCCcEeEEEe
Confidence 3665 6789999999999999999865443333333 47999999998889999874 4578888884 222221 122
Q ss_pred ecccCceeEEEe----ccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCC
Q psy5768 172 EIIMPIKDITLD----LKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGC 247 (652)
Q Consensus 172 ~~~~~p~gl~lD----~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~C 247 (652)
. -..|.+|+++ +.+++||+.++..+....+ +..+ .. -++...-
T Consensus 238 ~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi--D~~t-~~-------------~~~~i~~---------------- 284 (567)
T 1qks_A 238 I-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM--DGET-LE-------------PKKIQST---------------- 284 (567)
T ss_dssp C-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEE--ETTT-CC-------------EEEEEEC----------------
T ss_pred c-CCCCceeEEccccCCCCCEEEEEEccCCeEEEE--ECCC-Cc-------------EEEEEec----------------
Confidence 1 2469999999 5888999988875544332 1100 00 0000000
Q ss_pred cccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCe
Q psy5768 248 AELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKT 327 (652)
Q Consensus 248 s~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~ 327 (652)
+ .... +...+. | ...+.++........
T Consensus 285 -------~-----------------------------------~~~~-~~~~~~-p---------~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 285 -------R-----------------------------------GMTY-DEQEYH-P---------EPRVAAILASHYRPE 311 (567)
T ss_dssp -------C-----------------------------------EECT-TTCCEE-S---------CCCEEEEEECSSSSE
T ss_pred -------c-----------------------------------cccc-cccccc-C---------CCceEEEEEcCCCCE
Confidence 0 0000 000000 0 000111111111222
Q ss_pred EEEeecccccEEEEeccCCcceEE--eeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEe-CCCCCc
Q psy5768 328 LFYSDIQKGTINSVFFNGSNHRVL--LERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRL-GQHDKP 404 (652)
Q Consensus 328 lywsd~~~~~I~~~~~~g~~~~~i--~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~-~~~~~P 404 (652)
.+++....++|..++........+ +..-..+.++++|..++.+|.++...++|.++++...+ ....+.. ...-+|
T Consensus 312 ~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k--l~~~i~vgg~~Php 389 (567)
T 1qks_A 312 FIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK--LVAIEDTGGQTPHP 389 (567)
T ss_dssp EEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE--EEEEEECSSSSBCC
T ss_pred EEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc--EEEEEeccCcCCCC
Confidence 233333344444444332211111 12234688999999999999999999999999986421 2222332 222344
Q ss_pred -eEEE-EeCCCCEEEEEecCCCCCceEEEeecCCC-----ceEEEEcCC--CCCceEEEecCCCEEEEEeCC------CC
Q psy5768 405 -RGID-IDSCDSRIYWTNWNSHLPSIQRAFFSGFG-----TESIITTDI--TMPNALALDHQAEKLFWGDAR------LD 469 (652)
Q Consensus 405 -~~Ia-vdp~~g~Lywtd~~~~~~~I~r~~ldG~~-----~~~l~~~~l--~~P~glaiD~~~~~LYw~D~~------~~ 469 (652)
+++. ++|..|.+|.|..... ..|.....+... .+++-.... ..+..|.+.+.+++||+.... .+
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g~-~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMGD-DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS-SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ccceeeECCCCCcEEEeCCCCC-CeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 4665 5888788887754222 377777776522 223322222 234558888888888876532 34
Q ss_pred eEEEEecCCC-----ce--EEEec-------CCCCceeEEEEe--CCEEEEEcCC----CCeEEEEEccCCceEEEEec-
Q psy5768 470 KIERCDYDGT-----NR--IVLSK-------ISPLHPFDMAVY--GEFIFWTDWV----IHAVLRANKYTGEEVYTLRK- 528 (652)
Q Consensus 470 ~I~~~~ldG~-----~~--~~l~~-------~~~~~p~glav~--~~~lYwtd~~----~~~I~~~~k~~g~~~~~~~~- 528 (652)
.|..+|++.. .. +++.. .....|..+.+. +++||++.|. .+.|..+|..|++...++..
T Consensus 469 ~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 548 (567)
T 1qks_A 469 SVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDE 548 (567)
T ss_dssp CEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred eEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCCC
Confidence 8898887643 32 33321 123678888886 6799999984 68899999889887777763
Q ss_pred ccCCcceeEEEec
Q psy5768 529 NIRRPMGIVAISD 541 (652)
Q Consensus 529 ~~~~p~~i~~~~~ 541 (652)
.+..|.|..-+.+
T Consensus 549 ~~~~P~g~f~~~~ 561 (567)
T 1qks_A 549 RLVTPTGKFNVYN 561 (567)
T ss_dssp TCCSEEEEEEHHH
T ss_pred cccCCCeeeeeee
Confidence 3477888765543
No 87
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.12 E-value=1.3e-07 Score=98.23 Aligned_cols=249 Identities=15% Similarity=0.172 Sum_probs=160.6
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEE------eCCCcCCccCCCCcEEEEc---cCCcEEEEe
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVV------SQKKYPAVTACNLHIAVDW---IAQNIYWSD 106 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~------~~~~~~~p~~~~~~lavDw---~~~~lY~~d 106 (652)
.|..|++|++.+. ++||+++ ...++|+++..++...+.+. ..+ ...+. |||++. .++.||++.
T Consensus 30 gL~~P~~ia~~pd-G~llVte--r~~G~I~~v~~~~g~~~~v~~~~~v~~~g-~~Gll----Gia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 30 GLNSPWGLAPLPG-GDLLVSS--RDEATITRVDAKTGRKTELGEVPGVSPSG-EGGLL----GIALSPDYASDHMVYAYF 101 (347)
T ss_dssp CCSSEEEEEECTT-SCEEEEE--TTTCEEEEECTTTCCEEEEEECTTCCCBT-TBSEE----EEEECTTHHHHCEEEEEE
T ss_pred CCCCceEEEEcCC-CcEEEEE--ecCCEEEEEECCCCcEeeecccCceeecC-CCCce----eeEeccccccCCEEEEEE
Confidence 6899999999975 7899999 76889999987644333332 123 44566 999987 378899865
Q ss_pred C--CCCEEEEEEcCCC--------cEEEEEeC----CCCCceeEEEcCCCCeEEEEec--C----------CCCeEEEEe
Q psy5768 107 P--KENVIEVARLTGQ--------YRYVLISG----GVDQPSALAVDPESGYLFWSES--G----------KIPLIARAG 160 (652)
Q Consensus 107 ~--~~~~I~v~~~dg~--------~~~~l~~~----~~~~P~~iavd~~~g~lywtd~--~----------~~~~I~~~~ 160 (652)
+ ..++|.++.+++. ..++++.. ....+..|+++| .|+||++.. + ...+|.|.+
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 3 5678999988762 23455442 345678899999 789999942 1 246899999
Q ss_pred CCCC--------CcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeec
Q psy5768 161 LDGK--------KQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKD 232 (652)
Q Consensus 161 ldg~--------~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~ 232 (652)
.||+ .. .++..++..|.||++|+ +++||..+........|.. +.++.. |
T Consensus 181 ~dG~ip~~nPf~~~-~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~----------i~~G~n--------y--- 237 (347)
T 3das_A 181 PDGEPAPGNPFPGS-PVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNA----------IKPGDN--------Y--- 237 (347)
T ss_dssp TTSSBCTTCSSTTC-CEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEE----------ECTTCB--------C---
T ss_pred CCCCccCCCCCCCC-eEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeE----------EcCCCE--------e---
Confidence 9998 33 35666788999999999 6899998864222122211 111100 0
Q ss_pred cCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccc
Q psy5768 233 AQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTM 312 (652)
Q Consensus 233 ~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~ 312 (652)
+--.|. +. . +...+..|+..+.. .
T Consensus 238 ---GwP~~~-----------------------------g~-----~-----------------~~~~~~~P~~~~~~--~ 261 (347)
T 3das_A 238 ---GWPEAE-----------------------------GK-----G-----------------GGSGFHDPVAQWST--D 261 (347)
T ss_dssp ---CTTTCC-----------------------------SS-----C-----------------CCTTCCCCSEEECT--T
T ss_pred ---cCCccc-----------------------------CC-----C-----------------CCccccCCcEecCC--C
Confidence 000000 00 0 00011122222211 1
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCc----ceEEeec-cCceeeeEEEccCCEEEEEeC
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN----HRVLLER-QGSVEGLAYEYVHNYLYWTCN 375 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~----~~~i~~~-~~~~~glAvDw~~~~LYwtd~ 375 (652)
...+.+++|. ++.+|.......+|.++.+++.. .+.++.+ ..+|.+|+++. .+.||+++.
T Consensus 262 ~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p-DG~lyv~td 326 (347)
T 3das_A 262 EASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG-GDKLWLVTS 326 (347)
T ss_dssp TCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE-TTEEEEEEC
T ss_pred CCCCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC-CCcEEEEEc
Confidence 1246777775 58899999999999999987643 2445543 57899999998 458888764
No 88
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.11 E-value=5.7e-11 Score=83.50 Aligned_cols=41 Identities=32% Similarity=0.695 Sum_probs=36.7
Q ss_pred ccccCCCceeeccCeecCCccCCCCCCCCCCCCCCCCCCCC
Q psy5768 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCA 630 (652)
Q Consensus 590 ~~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~ 630 (652)
++.|.+.+|+|.+|+||+..|+|||+.||.|||||....|.
T Consensus 3 ~~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c~C~ 43 (45)
T 1d2l_A 3 PPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCH 43 (45)
T ss_dssp CCBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTTTCC
T ss_pred CCcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCCcCC
Confidence 45788899999999999999999999999999999885553
No 89
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.08 E-value=1.8e-07 Score=96.82 Aligned_cols=144 Identities=10% Similarity=0.051 Sum_probs=102.8
Q ss_pred CCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEE
Q psy5768 37 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVAR 116 (652)
Q Consensus 37 ~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~ 116 (652)
...+.+.++++.++.+||+| ...+.|++++.++.....+ ... ..|. +++++. .+++|++. ...|.+.+
T Consensus 48 ~~~~egp~~~~~~~~l~~~d--~~~~~i~~~d~~~~~~~~~-~~~--~~v~----~i~~~~-dg~l~v~~--~~gl~~~d 115 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFN--ILERELHELHLASGRKTVH-ALP--FMGS----ALAKIS-DSKQLIAS--DDGLFLRD 115 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEE--GGGTEEEEEETTTTEEEEE-ECS--SCEE----EEEEEE-TTEEEEEE--TTEEEEEE
T ss_pred CCCCcCCeEeCCCCEEEEEE--CCCCEEEEEECCCCcEEEE-ECC--Ccce----EEEEeC-CCeEEEEE--CCCEEEEE
Confidence 34678899999999999999 7788999999987654433 222 3467 999986 56677776 34699999
Q ss_pred cCCCcEEEEEeCC----CCCceeEEEcCCCCeEEEEecCC-----CCeEEEEeCCCCCcEEEEeecccCceeEEEeccCC
Q psy5768 117 LTGQYRYVLISGG----VDQPSALAVDPESGYLFWSESGK-----IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFF 187 (652)
Q Consensus 117 ~dg~~~~~l~~~~----~~~P~~iavd~~~g~lywtd~~~-----~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~ 187 (652)
+++...+.+.... ...|.++++|| +|.+|+++.+. ...|.+.+ +|+.. . +...+..|+++++++.++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~-~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT-K-LFADISIPNSICFSPDGT 191 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-E-EEEEESSEEEEEECTTSC
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-E-eeCCCcccCCeEEcCCCC
Confidence 8654444444321 23688999998 67888887531 34788887 55422 2 234456899999999988
Q ss_pred EEEEEeCCC
Q psy5768 188 SAFYRNLSK 196 (652)
Q Consensus 188 ~ly~~d~~g 196 (652)
+|||.+...
T Consensus 192 ~lyv~~~~~ 200 (326)
T 2ghs_A 192 TGYFVDTKV 200 (326)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 999987653
No 90
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.04 E-value=2.7e-08 Score=101.38 Aligned_cols=204 Identities=14% Similarity=0.084 Sum_probs=141.3
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccC-------ceeeeEE---EccCCEEEE-EeC-------
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQG-------SVEGLAY---EYVHNYLYW-TCN------- 375 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~-------~~~glAv---Dw~~~~LYw-td~------- 375 (652)
.+.+++||...+++|+++...++|.+++.++...+.+. .++. .+.||.+ |.. +.|+. ++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccccc
Confidence 35688999999999999999999999999855444333 4332 5789999 676 66666 552
Q ss_pred -----CCCeEEEEEcCCCCCc-cEEEEEeC------------CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCC
Q psy5768 376 -----NDATINKIDLDSPKAQ-RIVVVRLG------------QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFG 437 (652)
Q Consensus 376 -----~~~~I~~~~~~~~~~~-~~~~~~~~------------~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~ 437 (652)
....+.+.++.+...+ ....+.+. ....|.+||+|+ .|..|+|+...- +.|+|...||+.
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~-~~I~rV~pdG~~ 170 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGM-PAIARVSADGKT 170 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESS-CEEEEECTTSCC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCC-CeEEEEeCCCCE
Confidence 3567889998721111 22233321 223488999999 799999987631 589999999996
Q ss_pred ceEEEEcC-----CCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEE-ec--C---CCCceeEE-EE-eCCEE-E
Q psy5768 438 TESIITTD-----ITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL-SK--I---SPLHPFDM-AV-YGEFI-F 503 (652)
Q Consensus 438 ~~~l~~~~-----l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l-~~--~---~~~~p~gl-av-~~~~l-Y 503 (652)
...+.... ...++||++++.+..|+.++. .++|.++|++-..+..+ +. + .+..|-+| +. +++.+ +
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEE
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEE
Confidence 55544321 223789999999999999999 89999999984333112 21 1 35678886 54 46655 9
Q ss_pred EEcCCCCeEEEEEccCCce
Q psy5768 504 WTDWVIHAVLRANKYTGEE 522 (652)
Q Consensus 504 wtd~~~~~I~~~~k~~g~~ 522 (652)
+++...+.+...++..-+.
T Consensus 250 V~~~~~~~~~l~S~DgW~s 268 (334)
T 2p9w_A 250 VGARAPYAISFRSWDNWKS 268 (334)
T ss_dssp EEEETTEEEEEECSSTTSE
T ss_pred EEcCCCCEEEEECCCCcce
Confidence 9998777655555544333
No 91
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.04 E-value=4.2e-07 Score=95.42 Aligned_cols=167 Identities=11% Similarity=0.067 Sum_probs=114.8
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEecc-CCcceEEe--e--c-cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFN-GSNHRVLL--E--R-QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSP 388 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~-g~~~~~i~--~--~-~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~ 388 (652)
.+.++++++..+.||.++...++|+..+++ ....+.+. . . ...|.++++++.++.||.++...++|.+.+++..
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC
Confidence 467889999888999999877889988886 32222221 1 1 3579999999999999999988889988877532
Q ss_pred CCccE---EEEE-eCCC----C-------CceEEE-EeCCCCEEEEEecCCC---CCceEEEeec--CCCceE--EEEcC
Q psy5768 389 KAQRI---VVVR-LGQH----D-------KPRGID-IDSCDSRIYWTNWNSH---LPSIQRAFFS--GFGTES--IITTD 445 (652)
Q Consensus 389 ~~~~~---~~~~-~~~~----~-------~P~~Ia-vdp~~g~Lywtd~~~~---~~~I~r~~ld--G~~~~~--l~~~~ 445 (652)
.+... ..+. .... . .|.+++ ++|...+||.++.+.. ...|....++ |.-..+ ++...
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 22211 1121 1111 2 489999 9998889999987643 1155555554 332211 12223
Q ss_pred CCCCceEEEec---CCCEEEEEeCCCCeEEEEecCCCce
Q psy5768 446 ITMPNALALDH---QAEKLFWGDARLDKIERCDYDGTNR 481 (652)
Q Consensus 446 l~~P~glaiD~---~~~~LYw~D~~~~~I~~~~ldG~~~ 481 (652)
-..|.++++++ ++++||.++...+.|...++++...
T Consensus 306 ~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 34689999999 7999999988878888888887633
No 92
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.02 E-value=1.8e-08 Score=105.10 Aligned_cols=195 Identities=11% Similarity=0.001 Sum_probs=127.4
Q ss_pred EEEEEEEcCCCeEEEee------------cccccEEEEeccCC--cceEEe-ec------cCceeeeEEEcc---CCEEE
Q psy5768 316 IIELSYDYKRKTLFYSD------------IQKGTINSVFFNGS--NHRVLL-ER------QGSVEGLAYEYV---HNYLY 371 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd------------~~~~~I~~~~~~g~--~~~~i~-~~------~~~~~glAvDw~---~~~LY 371 (652)
+..|++++ ++.+|.+. ...++|++++++.. ..+.+. ++ ...|.||.+... ...||
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34455544 45666654 24567777776531 122222 33 248999999663 34799
Q ss_pred EEeCC--CCeEEEEEcCCCCCccEEEE-E--eCCCCCceEEEEeCCCCEEEEEecC---------------CCCCceEEE
Q psy5768 372 WTCNN--DATINKIDLDSPKAQRIVVV-R--LGQHDKPRGIDIDSCDSRIYWTNWN---------------SHLPSIQRA 431 (652)
Q Consensus 372 wtd~~--~~~I~~~~~~~~~~~~~~~~-~--~~~~~~P~~Iavdp~~g~Lywtd~~---------------~~~~~I~r~ 431 (652)
.++.. ..+|++..++.... ..+++ . ...+..|.++++++ .|.+|+++.. ...++|+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~-~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEK-SLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTT-EEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEECCCCCCeEEEEEEECCCC-EEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 99876 45677766653221 22222 1 24568899999999 6888887642 123578887
Q ss_pred eecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCC----ceEEEecCCCCceeEEEEeC--CEEEEE
Q psy5768 432 FFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGT----NRIVLSKISPLHPFDMAVYG--EFIFWT 505 (652)
Q Consensus 432 ~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~----~~~~l~~~~~~~p~glav~~--~~lYwt 505 (652)
.. ...++ +..++..||||+++++++.||++|...++|.++++++. +++++ .. ...|-||+++. +.||.+
T Consensus 209 d~--~~~~~-~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~-~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 209 SP--NDVRV-VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF-DTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp CT--TCCEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC-SSEEEEEEECTTTCCEEEE
T ss_pred EC--CeEEE-eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC-CCCCceEEEeCCCCcEEEE
Confidence 65 23443 44678899999999999999999999999999999742 23344 32 37899999994 688885
Q ss_pred c-CCCCeEEEEEcc
Q psy5768 506 D-WVIHAVLRANKY 518 (652)
Q Consensus 506 d-~~~~~I~~~~k~ 518 (652)
. |....|.+.++.
T Consensus 284 ~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 284 CHPNGMRIFFYDAE 297 (355)
T ss_dssp EESCHHHHHSCCTT
T ss_pred ecCCceEEEEECCC
Confidence 4 665556555543
No 93
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.01 E-value=9.7e-08 Score=103.52 Aligned_cols=149 Identities=13% Similarity=0.124 Sum_probs=108.8
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcC-CCccEEEEe--C------CCcCCccCCCCcEEEEcc---CCcEE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD-GTKRETVVS--Q------KKYPAVTACNLHIAVDWI---AQNIY 103 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~d-gs~~~~v~~--~------~~~~~p~~~~~~lavDw~---~~~lY 103 (652)
.+..|++|++++. ++||+++ ...++|+++..+ |. .+.+.. . + ...+. |||++.. ++.||
T Consensus 25 ~l~~P~~~a~~pd-G~l~V~e--~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g-~~Gll----gia~~Pdf~~~g~lY 95 (454)
T 1cru_A 25 NLNKPHALLWGPD-NQIWLTE--RATGKILRVNPESGS-VKTVFQVPEIVNDADG-QNGLL----GFAFHPDFKNNPYIY 95 (454)
T ss_dssp CCSSEEEEEECTT-SCEEEEE--TTTCEEEEECTTTCC-EEEEEECTTCCCCTTS-SCSEE----EEEECTTTTTSCEEE
T ss_pred CCCCceEEEEcCC-CcEEEEE--cCCCEEEEEECCCCc-EeEEecCCccccccCC-CCcee----EEEECCCcCcCCEEE
Confidence 5789999999975 7899999 666689999875 44 333322 1 1 22344 9999976 88999
Q ss_pred EEeCC------------CCEEEEEEcCCC-----cEEEEEe----CCCCCceeEEEcCCCCeEEEEecC--C--------
Q psy5768 104 WSDPK------------ENVIEVARLTGQ-----YRYVLIS----GGVDQPSALAVDPESGYLFWSESG--K-------- 152 (652)
Q Consensus 104 ~~d~~------------~~~I~v~~~dg~-----~~~~l~~----~~~~~P~~iavd~~~g~lywtd~~--~-------- 152 (652)
++++. ..+|.++++++. ..++++. .....+..|+++| .|+||++... .
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~ 174 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFL 174 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTS
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccccc
Confidence 99863 358999887542 3455554 2345699999999 7899999432 0
Q ss_pred ---------------------CCeEEEEeCCCCC----------cEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 153 ---------------------IPLIARAGLDGKK----------QTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 153 ---------------------~~~I~~~~ldg~~----------~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
.++|.|.+.||+- ...++..++..|.||++|+ +++||..+..
T Consensus 175 ~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g 247 (454)
T 1cru_A 175 PNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQG 247 (454)
T ss_dssp CCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEEC
T ss_pred ccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecC
Confidence 3689999999982 2345666788999999999 6999998753
No 94
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=6.1e-06 Score=91.65 Aligned_cols=344 Identities=11% Similarity=0.045 Sum_probs=201.5
Q ss_pred EECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC---CCc
Q psy5768 45 VWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT---GQY 121 (652)
Q Consensus 45 ~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d---g~~ 121 (652)
+++ ++++|++. ...+.|..++.........+..+ .. |. ++++++.++.||.++.. +.|.+.+++ ++.
T Consensus 145 ~~p-~~~~~vs~--~~d~~V~v~D~~t~~~~~~i~~g-~~-~~----~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 145 LDL-PNLFSVTL--RDAGQIALVDGDSKKIVKVIDTG-YA-VH----ISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCG-GGEEEEEE--GGGTEEEEEETTTCCEEEEEECS-TT-EE----EEEECTTSCEEEEEETT-SEEEEEETTSSSCEE
T ss_pred cCC-CCEEEEEE--cCCCeEEEEECCCceEEEEEecC-cc-cc----eEEECCCCCEEEEECCC-CeEEEEECcCCCCcE
Confidence 676 57999999 77889999887644333334444 33 66 99999999999999976 999999993 333
Q ss_pred EEEEEeCCCCCceeEEEcC----CCCeEEEEecCCCCeEEEEeCCCCCcEEEEeec-----------ccCceeEEEeccC
Q psy5768 122 RYVLISGGVDQPSALAVDP----ESGYLFWSESGKIPLIARAGLDGKKQTILAQEI-----------IMPIKDITLDLKF 186 (652)
Q Consensus 122 ~~~l~~~~~~~P~~iavd~----~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~-----------~~~p~gl~lD~~~ 186 (652)
...+- . -..|+.++++| ...+||.++.. .+.|...+.........+... -..+.++++++.+
T Consensus 215 ~~~i~-~-g~~p~~va~sp~~~~dg~~l~v~~~~-~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 215 VAEIK-I-GIEARSVESSKFKGYEDRYTIAGAYW-PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp EEEEE-C-CSEEEEEEECCSTTCTTTEEEEEEEE-SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred EEEEe-c-CCCcceEEeCCCcCCCCCEEEEEEcc-CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 33332 2 35799999999 88899998753 345665554322222222210 0123344444333
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCc
Q psy5768 187 FSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGV 266 (652)
Q Consensus 187 ~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~ 266 (652)
.++|+...+.+
T Consensus 292 ~~~~vs~~~~g--------------------------------------------------------------------- 302 (543)
T 1nir_A 292 PEFIVNVKETG--------------------------------------------------------------------- 302 (543)
T ss_dssp SEEEEEETTTT---------------------------------------------------------------------
T ss_pred CEEEEEECCCC---------------------------------------------------------------------
Confidence 33333322211
Q ss_pred cccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCC
Q psy5768 267 VAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGS 346 (652)
Q Consensus 267 l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~ 346 (652)
.|..+++.+..... +..+.. -..+..+.|++..+++|.+....++|..+++...
T Consensus 303 ---------------------~i~vvd~~~~~~l~--~~~i~~---~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 303 ---------------------KVLLVNYKDIDNLT--VTSIGA---APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp ---------------------EEEEEECTTSSSCE--EEEEEC---CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ---------------------eEEEEEecCCCcce--eEEecc---CcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 12222221110000 001110 1224457788888888888887888888887654
Q ss_pred cceEEeeccCce---eeeEE-EccCCEEEEEeC-CCCeEEEEEcCCCCC---ccEEEEEeC-CCCCceEEEEeCCCCEEE
Q psy5768 347 NHRVLLERQGSV---EGLAY-EYVHNYLYWTCN-NDATINKIDLDSPKA---QRIVVVRLG-QHDKPRGIDIDSCDSRIY 417 (652)
Q Consensus 347 ~~~~i~~~~~~~---~glAv-Dw~~~~LYwtd~-~~~~I~~~~~~~~~~---~~~~~~~~~-~~~~P~~Iavdp~~g~Ly 417 (652)
.....+..-..| .|.++ ++..+.+|.+.. ..++|.+++++.... ..+.+-.+. ....+..|+++|...+||
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~ 436 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 436 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEE
T ss_pred eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEE
Confidence 333333222223 24544 566688888875 568999999875211 012222222 335678999999888888
Q ss_pred EEec-CCC---CCceEEEeecCCCce-EEE--------EcCCCCCceEEEecCCCEEEEEeC----CCCeEEEEecCCCc
Q psy5768 418 WTNW-NSH---LPSIQRAFFSGFGTE-SII--------TTDITMPNALALDHQAEKLFWGDA----RLDKIERCDYDGTN 480 (652)
Q Consensus 418 wtd~-~~~---~~~I~r~~ldG~~~~-~l~--------~~~l~~P~glaiD~~~~~LYw~D~----~~~~I~~~~ldG~~ 480 (652)
.... +.. ...|...+++..... ..+ .+...+|..+++.++++.||++.. ..+.|..+|.....
T Consensus 437 v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 437 VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp ECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred EecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 7652 211 236777777644332 332 222456778999999999998853 34788888876544
Q ss_pred eEEEec-CCCCceeEEE
Q psy5768 481 RIVLSK-ISPLHPFDMA 496 (652)
Q Consensus 481 ~~~l~~-~~~~~p~gla 496 (652)
.+..+. ..+..|-|.-
T Consensus 517 ~~~~i~~~~~~~p~g~~ 533 (543)
T 1nir_A 517 LKAVVKDPRLITPTGKF 533 (543)
T ss_dssp EEEEECCTTCCSEEEEE
T ss_pred EEEeecCCCccCCCeee
Confidence 433333 2356676653
No 95
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=1.6e-07 Score=98.85 Aligned_cols=299 Identities=12% Similarity=0.108 Sum_probs=167.7
Q ss_pred EEEccCCcEEEEeCC----CCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecC--------CCCeEEEEeC
Q psy5768 94 AVDWIAQNIYWSDPK----ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG--------KIPLIARAGL 161 (652)
Q Consensus 94 avDw~~~~lY~~d~~----~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~--------~~~~I~~~~l 161 (652)
+.++..+++|++|.. .+.|.++|.+......-+..+ ..|. ++++|...+||.+++. ....|...+.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 335568899999986 679999998755443334433 4586 9999999999999842 1234666665
Q ss_pred CCCCcEEEEeec-------ccCceeEEEeccCCEEEEEeCC-CCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeecc
Q psy5768 162 DGKKQTILAQEI-------IMPIKDITLDLKFFSAFYRNLS-KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDA 233 (652)
Q Consensus 162 dg~~~~~~~~~~-------~~~p~gl~lD~~~~~ly~~d~~-g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~ 233 (652)
.......-+.-. ...|.++++++.+++||+.+.. .+...+|- . ....++...+
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID--~-~t~~vv~tI~---------------- 177 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD--L-EGKAFKRMLD---------------- 177 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEE--T-TTTEEEEEEE----------------
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEE--C-CCCcEEEEEE----------------
Confidence 543332222111 1379999999999999999875 33333331 1 1111110000
Q ss_pred CCCCCCCCCCCCCCcccceecCC-CceEEEeCCccccCCCcccccceEEEEeee--cceeEEecCCCCCCCCCceeeeec
Q psy5768 234 QTGTNPCGVNNGGCAELCLYNGV-SAVCACAHGVVAQDGKSCSEYDAFIMYSRV--NRIDSIHMTDKSDLNSPFESIRNS 310 (652)
Q Consensus 234 q~~~n~C~~~ng~Cs~lC~~~~~-~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~--~~i~~i~l~~~~~~~~p~~~~~~~ 310 (652)
.++|... .+.+. .+...|+.|.+ +++... +.+.... ....+... .++
T Consensus 178 ----------v~g~~~~-~P~g~~~~~~~~~DG~~-------------~~v~~~~~g~v~~~~-~~~~~~~~--~~~--- 227 (386)
T 3sjl_D 178 ----------VPDCYHI-FPTAPDTFFMHCRDGSL-------------AKVAFGTEGTPEITH-TEVFHPED--EFL--- 227 (386)
T ss_dssp ----------CCSEEEE-EEEETTEEEEEETTSCE-------------EEEECCSSSCCEEEE-CCCCSCTT--SCB---
T ss_pred ----------CCCccee-ecCCCceeEEECCCCCE-------------EEEECCCCCeEEEee-cceecccc--ccc---
Confidence 1223211 11111 34566776632 122211 1111000 00000000 011
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe--e--------ccCceee---eEEEccCCEEEEEeCC-
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL--E--------RQGSVEG---LAYEYVHNYLYWTCNN- 376 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~--~--------~~~~~~g---lAvDw~~~~LYwtd~~- 376 (652)
+. ..+|+...++++|+.. .++++.+++.+...+.+- + .-..|.| +|+|..++.||.+...
T Consensus 228 --~~---~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 228 --IN---HPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp --CS---CCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred --cc---cceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 01 1256677788777655 478999988765433221 1 0113545 9999999999998641
Q ss_pred --------CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCC-EEEEEecCCCCCceEEEeecCCCceEEEEc-CC
Q psy5768 377 --------DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS-RIYWTNWNSHLPSIQRAFFSGFGTESIITT-DI 446 (652)
Q Consensus 377 --------~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g-~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-~l 446 (652)
.++|.++++...+ .+-.+.....|.+|+++|... +||.++++.. .|...+ ....+++-+. ..
T Consensus 302 ~~~~hk~~~~~V~viD~~t~k----v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~--~VsViD--~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 302 DEWRHKTASRFVVVLDAKTGE----RLAKFEMGHEIDSINVSQDEKPLLYALSTGDK--TLYIHD--AESGEELRSVNQL 373 (386)
T ss_dssp CTTCTTSCEEEEEEEETTTCC----EEEEEEEEEEECEEEECSSSSCEEEEEETTTT--EEEEEE--TTTCCEEEEECCC
T ss_pred cccccCCCCCEEEEEECCCCe----EEEEEECCCCcceEEECCCCCeEEEEEcCCCC--eEEEEE--CCCCcEEEEecCC
Confidence 2579999986533 222222235788999999875 7999998754 665444 3344444332 35
Q ss_pred CCCceEEEecC
Q psy5768 447 TMPNALALDHQ 457 (652)
Q Consensus 447 ~~P~glaiD~~ 457 (652)
..|+.|.+..+
T Consensus 374 ~~p~~l~~s~d 384 (386)
T 3sjl_D 374 GHGPQVITTAD 384 (386)
T ss_dssp CSSCCEEEECC
T ss_pred CCCceeEECCc
Confidence 68888887643
No 96
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=1.9e-07 Score=93.14 Aligned_cols=191 Identities=13% Similarity=0.007 Sum_probs=133.0
Q ss_pred eEEEEEEEcCCCeEEEeec--ccccEEEEeccCCcce-EEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 315 NIIELSYDYKRKTLFYSDI--QKGTINSVFFNGSNHR-VLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~--~~~~I~~~~~~g~~~~-~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
.+.+++|+.. ++||.+.. ..++|.++++...... .+. .....++|++++ ++.||+++...+.+.+++....
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~-- 96 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL-- 96 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT--
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC--
Confidence 3578999875 79999974 4678999998754332 222 233356677776 7899999999999999998653
Q ss_pred ccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-----CCCCCceEEEecCCCEEEEEe
Q psy5768 391 QRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-----DITMPNALALDHQAEKLFWGD 465 (652)
Q Consensus 391 ~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~P~glaiD~~~~~LYw~D 465 (652)
+.+-..... .|.++.+.+..++||.++ +. .+|...+........-+.. .+..|++|.+. +++||...
T Consensus 97 --~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs--~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~ 168 (266)
T 2iwa_A 97 --SNIKNFTHQ-MKDGWGLATDGKILYGSD-GT--SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANI 168 (266)
T ss_dssp --EEEEEEECC-SSSCCEEEECSSSEEEEC-SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE
T ss_pred --cEEEEEECC-CCCeEEEEECCCEEEEEC-CC--CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEec
Confidence 333333322 466666777678999998 43 3787776655433222221 24468888887 57999999
Q ss_pred CCCCeEEEEecCCCce-EEEecCC------------CCceeEEEEe--CCEEEEEcCCCCeEEEEEcc
Q psy5768 466 ARLDKIERCDYDGTNR-IVLSKIS------------PLHPFDMAVY--GEFIFWTDWVIHAVLRANKY 518 (652)
Q Consensus 466 ~~~~~I~~~~ldG~~~-~~l~~~~------------~~~p~glav~--~~~lYwtd~~~~~I~~~~k~ 518 (652)
...+.|.++|...... ..+--.+ ...|.||++. ++++|+|....+.|+.++..
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 8899999999965443 3332111 1468999998 46999999998988877653
No 97
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.98 E-value=1.1e-07 Score=101.64 Aligned_cols=233 Identities=9% Similarity=-0.090 Sum_probs=144.7
Q ss_pred EEEEeee------cceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeec---------ccccEEEEecc
Q psy5768 280 FIMYSRV------NRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDI---------QKGTINSVFFN 344 (652)
Q Consensus 280 ~Ll~s~~------~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~---------~~~~I~~~~~~ 344 (652)
.+++++. +.|..|++. ... .+..+... ..+ ++++++..++||+++. ..+.|..++..
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~-t~~---vv~~I~vG---~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGS-TGR---ILGMTDGG---FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETT-TTE---EEEEEEEC---SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred EEEEECCCcCCCCCeEEEEECC-CCE---EEEEEECC---CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 4666654 577777762 211 22334322 346 8999999999999985 35678888875
Q ss_pred CCcc-eEEeec-------cCceeeeEEEccCCEEEEEeCC-CCeEEEEEcCCCCCccEEEEEeCCC----C----CceEE
Q psy5768 345 GSNH-RVLLER-------QGSVEGLAYEYVHNYLYWTCNN-DATINKIDLDSPKAQRIVVVRLGQH----D----KPRGI 407 (652)
Q Consensus 345 g~~~-~~i~~~-------~~~~~glAvDw~~~~LYwtd~~-~~~I~~~~~~~~~~~~~~~~~~~~~----~----~P~~I 407 (652)
.... ..+.-+ ...|.+++++..++.||.++.. .++|.++++... +.+-.+... . ....+
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~----kvv~~I~v~g~~~~~p~g~~~~v 233 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK----TFDRMLDVPDCYHIFPASPTVFY 233 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT----EEEEEEECCSEEEEEEEETTEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC----eEEEEEEcCCceeeccCCCcEEE
Confidence 4332 233222 2479999999999999999875 788999998653 222221110 1 12225
Q ss_pred EEeCCCCEEEEEecCCC-----------------------------------CCceEEEeecCCCceEEEEcCC------
Q psy5768 408 DIDSCDSRIYWTNWNSH-----------------------------------LPSIQRAFFSGFGTESIITTDI------ 446 (652)
Q Consensus 408 avdp~~g~Lywtd~~~~-----------------------------------~~~I~r~~ldG~~~~~l~~~~l------ 446 (652)
++.+....+|++. ... .+++..+++.+....++-...+
T Consensus 234 ~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 234 MNCRDGSLARVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEETTSSEEEEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEcCCCCEEEEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 5555333333332 111 0133333333322211110000
Q ss_pred ---CCCce---EEEecCCCEEEEEeC---------CCCeEEEEecCCCceEEEecCCCCceeEEEEe--CC-EEEEEcCC
Q psy5768 447 ---TMPNA---LALDHQAEKLFWGDA---------RLDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GE-FIFWTDWV 508 (652)
Q Consensus 447 ---~~P~g---laiD~~~~~LYw~D~---------~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~-~lYwtd~~ 508 (652)
..|.| ++++.++++||++.. ..+.|..+|+.......-+... ..|.+|++. +. ++|.+.+.
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETT
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCC
Confidence 12555 899999999999974 2357999998765544333322 479999997 55 89999999
Q ss_pred CCeEEEEEccCCceEEEE
Q psy5768 509 IHAVLRANKYTGEEVYTL 526 (652)
Q Consensus 509 ~~~I~~~~k~~g~~~~~~ 526 (652)
.+.|..+|..+++.++.+
T Consensus 392 s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 999999999999988777
No 98
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.97 E-value=1e-10 Score=84.17 Aligned_cols=37 Identities=32% Similarity=0.688 Sum_probs=34.8
Q ss_pred ccccCCCceeeccCeecCCccCCCCCCCCCCCCCCCC
Q psy5768 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 590 ~~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
+..|.+.+|+|.+|+||+..|+|||..||.|||||..
T Consensus 4 p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~ 40 (52)
T 2m0p_A 4 PASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKN 40 (52)
T ss_dssp CCSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHS
T ss_pred CCCCCCCceECCCCCEEecCccCCCCCCCCCCCcccc
Confidence 4679999999999999999999999999999999976
No 99
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.96 E-value=1.4e-07 Score=93.53 Aligned_cols=178 Identities=10% Similarity=0.075 Sum_probs=123.5
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCcc-EE--EEe
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR-ET--VVS 79 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~-~~--v~~ 79 (652)
+++++.....|+.+|++|+...++... ....+.||+++ .++++++++ ....+++.+.++.... .. ...
T Consensus 41 L~aV~d~~~~I~~ld~~g~v~~~i~l~------g~~D~EGIa~~-~~g~~~vs~--E~~~~l~~~~v~~~~~i~~~~~~~ 111 (255)
T 3qqz_A 41 LFSTINKPAAIVEMTTNGDLIRTIPLD------FVKDLETIEYI-GDNQFVISD--ERDYAIYVISLTPNSEVKILKKIK 111 (255)
T ss_dssp EEEEEETTEEEEEEETTCCEEEEEECS------SCSSEEEEEEC-STTEEEEEE--TTTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEECCCCeEEEEeCCCCEEEEEecC------CCCChHHeEEe-CCCEEEEEE--CCCCcEEEEEcCCCCeeeeeeeec
Confidence 555555688999999999988888642 34789999998 567888888 7778888887664331 11 122
Q ss_pred CC-----CcCCccCCCCcEEEEccCCcEEEEeCCCC-EEEEEE--cCCCcEEEEEe------CCCCCceeEEEcCCCCeE
Q psy5768 80 QK-----KYPAVTACNLHIAVDWIAQNIYWSDPKEN-VIEVAR--LTGQYRYVLIS------GGVDQPSALAVDPESGYL 145 (652)
Q Consensus 80 ~~-----~~~~p~~~~~~lavDw~~~~lY~~d~~~~-~I~v~~--~dg~~~~~l~~------~~~~~P~~iavd~~~g~l 145 (652)
.. .....+ |||+|..+++||.+..... .|...+ +.+....++-. ..+..|.+|++||.+|.|
T Consensus 112 ~~~~~~~~N~g~E----GLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~l 187 (255)
T 3qqz_A 112 IPLQESPTNCGFE----GLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTL 187 (255)
T ss_dssp CCCSSCCCSSCCE----EEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEE
T ss_pred cccccccccCCcc----eEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeE
Confidence 11 012248 9999999999999875544 676666 12222233211 145689999999999999
Q ss_pred EEEecCCCCeEEEEeCCCCCcEEEEee--------cccCceeEEEeccCCEEEEEeCC
Q psy5768 146 FWSESGKIPLIARAGLDGKKQTILAQE--------IIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 146 ywtd~~~~~~I~~~~ldg~~~~~~~~~--------~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
|..+.. ...+...+++|.-...+--. .+.+|.|||+|.. ++||++.-.
T Consensus 188 liLS~~-s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~-G~lyIvsE~ 243 (255)
T 3qqz_A 188 LVLSHE-SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS-GNIYIVSEP 243 (255)
T ss_dssp EEEETT-TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTT-CCEEEEETT
T ss_pred EEEECC-CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCC-CCEEEEcCC
Confidence 999764 56899999998844333222 1469999999986 469998543
No 100
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.95 E-value=4.1e-08 Score=106.37 Aligned_cols=204 Identities=12% Similarity=0.090 Sum_probs=131.2
Q ss_pred cccceEEEEEEEcCCC-eEEEeecccccEEEEeccCCcc-eEE-------eec-----cCceeeeEEEcc---CCEEEEE
Q psy5768 311 TMMKNIIELSYDYKRK-TLFYSDIQKGTINSVFFNGSNH-RVL-------LER-----QGSVEGLAYEYV---HNYLYWT 373 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~-~lywsd~~~~~I~~~~~~g~~~-~~i-------~~~-----~~~~~glAvDw~---~~~LYwt 373 (652)
..+.++.+|++.+... +||+++.. ++|+.+..+|... +.+ ..+ ...+.|||+++. ++.||++
T Consensus 11 ~gL~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 11 SGLRQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp EEESSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred cCCCCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEE
Confidence 4567899999998874 89999874 7899987666421 111 122 457889999974 6789987
Q ss_pred eCCC------------CeEEEEEcCCCC-----C-ccEEEEEe---CCCCCceEEEEeCCCCEEEEEecCC---------
Q psy5768 374 CNND------------ATINKIDLDSPK-----A-QRIVVVRL---GQHDKPRGIDIDSCDSRIYWTNWNS--------- 423 (652)
Q Consensus 374 d~~~------------~~I~~~~~~~~~-----~-~~~~~~~~---~~~~~P~~Iavdp~~g~Lywtd~~~--------- 423 (652)
.+.. .+|.+..+.... . ..++++.. ........|+++| .|+||++-...
T Consensus 90 yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~ 168 (463)
T 2wg3_C 90 YTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEE 168 (463)
T ss_dssp EEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHH
T ss_pred EeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCcccc
Confidence 6421 367777775321 1 13444433 2345677899999 78999984321
Q ss_pred ------CCCceEEEeecCCC-------------------ceEEEEcCCCCCceEEEecCCC------EEEEEeC-C----
Q psy5768 424 ------HLPSIQRAFFSGFG-------------------TESIITTDITMPNALALDHQAE------KLFWGDA-R---- 467 (652)
Q Consensus 424 ------~~~~I~r~~ldG~~-------------------~~~l~~~~l~~P~glaiD~~~~------~LYw~D~-~---- 467 (652)
..++|.|.+.||.. +..|+...++.|.||++|+.++ +||.+|. +
T Consensus 169 ~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~ 248 (463)
T 2wg3_C 169 MDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRS 248 (463)
T ss_dssp CTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------
T ss_pred ccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCC
Confidence 14689999999951 3457778999999999998854 6777885 2
Q ss_pred CCeEEEEecCCC-----ceEEEecCC-CCceeEEEEeCC--------EEEEEcCCCCeEEEEEcc
Q psy5768 468 LDKIERCDYDGT-----NRIVLSKIS-PLHPFDMAVYGE--------FIFWTDWVIHAVLRANKY 518 (652)
Q Consensus 468 ~~~I~~~~ldG~-----~~~~l~~~~-~~~p~glav~~~--------~lYwtd~~~~~I~~~~k~ 518 (652)
.+.|..+. .|. .+....... ...|-|++++.+ .+++.++. +.|+++...
T Consensus 249 ~~ei~~i~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~ 311 (463)
T 2wg3_C 249 SARILQII-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQS 311 (463)
T ss_dssp CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-
T ss_pred CCeEeeec-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeC
Confidence 13344432 222 111111111 146899999754 38889987 778888643
No 101
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=1.6e-07 Score=93.69 Aligned_cols=162 Identities=11% Similarity=0.100 Sum_probs=115.5
Q ss_pred ceeeeEEEccCCEEEEEeCC--CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 357 SVEGLAYEYVHNYLYWTCNN--DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 357 ~~~glAvDw~~~~LYwtd~~--~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
.|.||+++.. +.||.+.+. .++|.++++...+ ....+.+.....+.+++++ .+.||+++|... .+...+.+
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~--~v~viD~~ 94 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN--IGFIYDRR 94 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTCCEEEEEEE--TTEEEEEETTCS--EEEEEETT
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCcceEEEEEe--CCEEEEEEecCC--EEEEEECC
Confidence 5799999975 699999753 6799999986532 2222333344455677777 479999999754 77776655
Q ss_pred CCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCce-EEEecC----CCCceeEEEEeCCEEEEEcCCC
Q psy5768 435 GFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNR-IVLSKI----SPLHPFDMAVYGEFIFWTDWVI 509 (652)
Q Consensus 435 G~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~-~~l~~~----~~~~p~glav~~~~lYwtd~~~ 509 (652)
..+++-.-....|.|+.+.+++++||.++ +.++|..+|...... ..+... ....|.+|.+.++.||.+.|.+
T Consensus 95 --t~~v~~~i~~g~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~ 171 (266)
T 2iwa_A 95 --TLSNIKNFTHQMKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT 171 (266)
T ss_dssp --TTEEEEEEECCSSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTS
T ss_pred --CCcEEEEEECCCCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCC
Confidence 33343332222356666666699999999 688999999887543 233211 1335788988888999999999
Q ss_pred CeEEEEEccCCceEEEEec
Q psy5768 510 HAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 510 ~~I~~~~k~~g~~~~~~~~ 528 (652)
+.|.++|..+|+....+..
T Consensus 172 ~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILL 190 (266)
T ss_dssp SEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEEC
Confidence 9999999999998888864
No 102
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.94 E-value=3.9e-10 Score=75.98 Aligned_cols=35 Identities=43% Similarity=0.801 Sum_probs=32.7
Q ss_pred ccCCCceeeccCeecCCccCCCCCCCCCCCCCCCC
Q psy5768 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 592 ~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
.|.+.+|+|.+|+||+..|+|||..||.|||||..
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~ 35 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEEN 35 (37)
T ss_dssp CCCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTT
T ss_pred CCCCCceEcCCCCeechhhccCCCCCCCCCccccC
Confidence 37788999999999999999999999999999975
No 103
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.94 E-value=1.7e-06 Score=88.43 Aligned_cols=293 Identities=6% Similarity=-0.032 Sum_probs=170.5
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
++|+....+.|.++|+............. ....|.++++++.++++|+++ ...+.|+.+++........+..+.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIAD----AGPTPMVPMVAPGGRIAYATV--NKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTT----CTTCCCCEEECTTSSEEEEEE--TTTTEEEEEETTTCCEEEEEECCB
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCC----CCCCccceEEcCCCCEEEEEe--CCCCeEEEEECCCCCeEeeEEcCC
Confidence 56777788999999997544433332110 001478999999988999999 777899999986543332233220
Q ss_pred c----CCccCCCCcEEEEccCCcEEEEeC-----------CCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEE
Q psy5768 83 Y----PAVTACNLHIAVDWIAQNIYWSDP-----------KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFW 147 (652)
Q Consensus 83 ~----~~p~~~~~~lavDw~~~~lY~~d~-----------~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lyw 147 (652)
. ..|. +++++..++.||+++. ..+.|.+.++++......+.. -..|..++++|...+||.
T Consensus 77 ~~~~~~~~~----~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 77 PEERVKSLF----GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYG 151 (337)
T ss_dssp TTEEEECTT----CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEE
T ss_pred ccccccccc----ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEE
Confidence 1 1466 9999988889999962 258899999876544434443 357999999997778998
Q ss_pred EecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceee
Q psy5768 148 SESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIK 227 (652)
Q Consensus 148 td~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (652)
++ ..|...++........+... .++..+++++.+.+||+....++....+
T Consensus 152 ~~----~~i~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~------------------------- 201 (337)
T 1pby_B 152 LG----RDLHVMDPEAGTLVEDKPIQ-SWEAETYAQPDVLAVWNQHESSGVMATP------------------------- 201 (337)
T ss_dssp ES----SSEEEEETTTTEEEEEECST-TTTTTTBCCCBCCCCCCCCTTTTEEEEE-------------------------
T ss_pred eC----CeEEEEECCCCcEeeeeecc-ccCCCceeCCCccEEeeeccCCCceeee-------------------------
Confidence 83 35666666543322222111 1122334444444444332221111000
Q ss_pred eeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceee
Q psy5768 228 IYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESI 307 (652)
Q Consensus 228 v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~ 307 (652)
|..... . ++. ..+. .....|..+++..+ .. ..+
T Consensus 202 -~~~~~~---------~-------------------------~~~--~~~~-----~~~~~v~~~d~~~~-~~----~~~ 234 (337)
T 1pby_B 202 -FYTARK---------D-------------------------IDP--ADPT-----AYRTGLLTMDLETG-EM----AMR 234 (337)
T ss_dssp -EEEEBT---------T-------------------------SCT--TSGG-----GEEEEEEEEETTTC-CE----EEE
T ss_pred -eecccc---------c-------------------------ccc--cccc-----ccccceEEEeCCCC-Cc----eEe
Confidence 000000 0 000 0000 01113444444211 10 011
Q ss_pred eeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 308 RNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 308 ~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
........+.++++++..+.||.+ .+.|+.+++........+..-..|.++++++.++.||.+ ...+.|.++++..
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~ 310 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-GALGDLAAYDAET 310 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-SBSSEEEEEETTT
T ss_pred ecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-cCCCcEEEEECcC
Confidence 111111346788999988889988 378998888754433333434578999999999999987 4578899999865
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.92 E-value=7.3e-06 Score=85.81 Aligned_cols=292 Identities=9% Similarity=-0.014 Sum_probs=170.1
Q ss_pred CeEEEecCCC-CeEEEEec--CCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcC--CCccE
Q psy5768 1 MFIAVSSPTQ-SKIVVCNL--EGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD--GTKRE 75 (652)
Q Consensus 1 ~~i~v~~~~~-~~I~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~d--gs~~~ 75 (652)
+.++|.+++. +.|+.+.+ +......+.... ......|..+++++..++||.++ .. .|..++++ |...
T Consensus 3 ~~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~---~~~~~~~~~~a~spdg~~l~~~~--~~--~v~~~~~~~~g~~~- 74 (365)
T 1jof_A 3 HHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTE---IPQDEPISWMTFDHERKNIYGAA--MK--KWSSFAVKSPTEIV- 74 (365)
T ss_dssp EEEEEEESSSSCEEEEEEEETTTTEEEEEEEEE---CCTTCCCSEEEECTTSSEEEEEE--BT--EEEEEEEEETTEEE-
T ss_pred EEEEEEEccCCCcEEEEEEECCCCCEEEeeEEc---cCCCCCCcEEEECCCCCEEEEEc--cc--eEEEEEECCCCCEE-
Confidence 3689999875 57876654 333333332110 01345789999999999999988 44 67777664 4332
Q ss_pred EEEe-CCCcCCccCCCCcEEEEccCCcEE--EEe-------C-----CCCEEEEEEcC--CCcEEEEEe---CCCCCcee
Q psy5768 76 TVVS-QKKYPAVTACNLHIAVDWIAQNIY--WSD-------P-----KENVIEVARLT--GQYRYVLIS---GGVDQPSA 135 (652)
Q Consensus 76 ~v~~-~~~~~~p~~~~~~lavDw~~~~lY--~~d-------~-----~~~~I~v~~~d--g~~~~~l~~---~~~~~P~~ 135 (652)
.+.. .. -+.|. +++++..++.|| .++ . ..+.+.+.+++ |+....+.. .....|.+
T Consensus 75 ~~~~~~~-~g~~~----~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (365)
T 1jof_A 75 HEASHPI-GGHPR----ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHG 149 (365)
T ss_dssp EEEEEEC-CSSGG----GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEE
T ss_pred EeeEeec-CCCCc----cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceE
Confidence 2222 11 13466 888887666434 343 1 45677777764 554433321 23468999
Q ss_pred EEEcCCCCeEEEEecCCCCeEEEEeCC-CCCcEEEEeec----ccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCc
Q psy5768 136 LAVDPESGYLFWSESGKIPLIARAGLD-GKKQTILAQEI----IMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDV 210 (652)
Q Consensus 136 iavd~~~g~lywtd~~~~~~I~~~~ld-g~~~~~~~~~~----~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~ 210 (652)
++++|...+||.++.+ ...|...+++ ......+.... -..|.++++++.+++||..+..++..+.+..+.
T Consensus 150 ~~~spdG~~l~~~~~~-~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~---- 224 (365)
T 1jof_A 150 MVFDPTETYLYSADLT-ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP---- 224 (365)
T ss_dssp EEECTTSSEEEEEETT-TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT----
T ss_pred EEECCCCCEEEEEcCC-CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC----
Confidence 9999977789999976 4578888876 22222211111 346999999999999998876544332221100
Q ss_pred eEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeeccee
Q psy5768 211 STISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRID 290 (652)
Q Consensus 211 ~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~ 290 (652)
. +|+ +.. .+.
T Consensus 225 -------~---------------------------------------------------~g~--------~~~----~~~ 234 (365)
T 1jof_A 225 -------A---------------------------------------------------THM--------PVY----THH 234 (365)
T ss_dssp -------T---------------------------------------------------TCC--------EEE----EEE
T ss_pred -------C---------------------------------------------------CCc--------EEE----ccc
Confidence 0 000 000 000
Q ss_pred EEecCCCCCC---CCCceeeeeccccceEEEEE-EEcCCCeEEEeecccc-----cEEEEeccC-CcceE---Eee-ccC
Q psy5768 291 SIHMTDKSDL---NSPFESIRNSTMMKNIIELS-YDYKRKTLFYSDIQKG-----TINSVFFNG-SNHRV---LLE-RQG 356 (652)
Q Consensus 291 ~i~l~~~~~~---~~p~~~~~~~~~~~~~~~v~-~D~~~~~lywsd~~~~-----~I~~~~~~g-~~~~~---i~~-~~~ 356 (652)
.+.. .+... ..+.. ....+.+++ +++..+.||.++...+ +|...+++. ..... ... ...
T Consensus 235 ~~~~-~~~~~~g~~~~~~------~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~ 307 (365)
T 1jof_A 235 SFPL-IPPGIPDRDPETG------KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTS 307 (365)
T ss_dssp EEES-SCTTCCCBCTTTS------SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSC
T ss_pred eEEc-CCCCcCCcccccc------cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCC
Confidence 0110 00000 00000 011356788 8888888998886554 777777642 22222 122 234
Q ss_pred ceeeeEEEc---cCCEEEEEeCCCCeEEEEEcCC
Q psy5768 357 SVEGLAYEY---VHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 357 ~~~glAvDw---~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
.|.++|+++ .++.||.++...++|.+.+++.
T Consensus 308 ~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 308 GGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp CTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 689999999 6999999998878888888765
No 105
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.92 E-value=1.1e-05 Score=85.01 Aligned_cols=107 Identities=7% Similarity=-0.140 Sum_probs=69.0
Q ss_pred EECCCCEEEEEeccC-Ccc---eEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeC---------CCCE
Q psy5768 45 VWPVKGKMFWSNVTK-QVV---TIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP---------KENV 111 (652)
Q Consensus 45 ~d~~~~~lyw~d~~~-~~~---~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~---------~~~~ 111 (652)
..+..+++|.+| . +.. .|+.++.+......-+..+ ..| +|++.+..+.||+++. ..+.
T Consensus 28 ~~~~~~~~yv~~--~~~~~~~~~v~v~D~~t~~~~~~i~~g------~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 28 PGADGRRSYINL--PAHHSAIIQQWVLDAGSGSILGHVNGG------FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCCCEEEEeC--CcccCCccEEEEEECCCCeEEEEecCC------CCC-CeEECCCCCEEEEEeccccccccCCCCCe
Confidence 336678899999 5 443 7788887633222223333 234 9999999999999984 2467
Q ss_pred EEEEEcCC-CcEEEEEeC------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5768 112 IEVARLTG-QYRYVLISG------GVDQPSALAVDPESGYLFWSESGKIPLIARAG 160 (652)
Q Consensus 112 I~v~~~dg-~~~~~l~~~------~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ 160 (652)
|.+++... +....+--. ....|+.++++|...+||.++......|...+
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 88998863 322222111 02469999999988899998754234555554
No 106
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.92 E-value=7.4e-10 Score=76.84 Aligned_cols=38 Identities=39% Similarity=0.914 Sum_probs=34.2
Q ss_pred cccCCCceeecc-CeecCCccCCCCCCCCCCCCCCCCCCCC
Q psy5768 591 TVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCA 630 (652)
Q Consensus 591 ~~C~~~~f~C~~-g~Ci~~~~~Cd~~~dC~d~sde~~~~C~ 630 (652)
..|.+.+|+|.+ |.||+..|+|||+.||.|||||.. |.
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~--C~ 40 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKS--CE 40 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTT--CC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccC--CC
Confidence 468889999985 899999999999999999999976 63
No 107
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.91 E-value=5.3e-10 Score=104.39 Aligned_cols=61 Identities=23% Similarity=0.443 Sum_probs=52.2
Q ss_pred ccccCCCceeec--cCeecCCccCCCCCCCCCCCCCCCCCCCCCC-CCCCCe--eecCCCCcccCC
Q psy5768 590 NTVCSEHDFKCS--DGMCIPFNQTCDRVYNCHDKSDEGILYCAMR-DCRPGY--FKCDNNKCILSS 650 (652)
Q Consensus 590 ~~~C~~~~f~C~--~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~-~C~~~~--f~C~~~~Ci~~~ 650 (652)
...|.+.+|+|. +|.||+..|.|||.+||.|||||....|... +|.+.+ ++|.++.|+...
T Consensus 50 ~~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~~~d~C~kr~ 115 (220)
T 2gtl_N 50 GTHCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTSTWHGCLARE 115 (220)
T ss_dssp CCSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEEEECSSCCCC
T ss_pred CCCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEecCChhhcCC
Confidence 457888999995 5899999999999999999999975669887 998765 679999998653
No 108
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.91 E-value=2.6e-10 Score=80.05 Aligned_cols=40 Identities=45% Similarity=0.865 Sum_probs=35.8
Q ss_pred cccCCCceeeccCeecCCccCCCCCCCCCCCCCCCCCCCC
Q psy5768 591 TVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCA 630 (652)
Q Consensus 591 ~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~ 630 (652)
..|.+.+|+|.+|.||+..|+|||+.||.|+|||....|.
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~C~ 42 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCT 42 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHHHHT
T ss_pred CCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCcccC
Confidence 4688899999999999999999999999999999874453
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.90 E-value=7.9e-07 Score=95.06 Aligned_cols=275 Identities=9% Similarity=0.069 Sum_probs=152.8
Q ss_pred ccCCcEEEEeCCC----CEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecC--------CCCeEEEEeCCCC
Q psy5768 97 WIAQNIYWSDPKE----NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG--------KIPLIARAGLDGK 164 (652)
Q Consensus 97 w~~~~lY~~d~~~----~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~--------~~~~I~~~~ldg~ 164 (652)
+..+++|+++... +.|.++|++......-+..+ ..| +|+++|...+||++++. ....|...+....
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 3467899999865 79999998765444334433 468 99999999999999852 1235677665433
Q ss_pred CcEEEEeec-------ccCceeEEEeccCCEEEEEeCC-CCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCC
Q psy5768 165 KQTILAQEI-------IMPIKDITLDLKFFSAFYRNLS-KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTG 236 (652)
Q Consensus 165 ~~~~~~~~~-------~~~p~gl~lD~~~~~ly~~d~~-g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~ 236 (652)
....-+.-. ...|.++++++.+++||+.+.. .+...+| +. ....++.. |.+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVI--D~-~t~kvv~~----------I~v-------- 218 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVV--DL-EGKTFDRM----------LDV-------- 218 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEE--ET-TTTEEEEE----------EEC--------
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEE--EC-CCCeEEEE----------EEc--------
Confidence 332212111 2469999999999999999875 3333332 11 11111000 110
Q ss_pred CCCCCCCCCCCcccceecC-CCceEEEeCCccccCCCcccccceEEEEee-ecceeEEe--cCCCCCCCCCceeeeeccc
Q psy5768 237 TNPCGVNNGGCAELCLYNG-VSAVCACAHGVVAQDGKSCSEYDAFIMYSR-VNRIDSIH--MTDKSDLNSPFESIRNSTM 312 (652)
Q Consensus 237 ~n~C~~~ng~Cs~lC~~~~-~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~-~~~i~~i~--l~~~~~~~~p~~~~~~~~~ 312 (652)
++|.++ ...+ ..|.-.|+.|. .+++.. ...+.... .-+. . ..| +
T Consensus 219 --------~g~~~~-~p~g~~~~v~~~~dG~-------------~~~V~~~~~~v~~~~~~~~~v-~-~~p---~----- 266 (426)
T 3c75_H 219 --------PDCYHI-FPASPTVFYMNCRDGS-------------LARVDFADGETKVTNTEVFHT-E-DEL---L----- 266 (426)
T ss_dssp --------CSEEEE-EEEETTEEEEEETTSS-------------EEEEECCTTCCEEEECCCCSC-T-TSC---B-----
T ss_pred --------CCceee-ccCCCcEEEEEcCCCC-------------EEEEECCCCcEEEEeeeeecc-C-CCc---e-----
Confidence 122110 0000 01223333332 111111 01111000 0000 0 000 0
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe--e--------ccCceee---eEEEccCCEEEEEeCC---
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL--E--------RQGSVEG---LAYEYVHNYLYWTCNN--- 376 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~--~--------~~~~~~g---lAvDw~~~~LYwtd~~--- 376 (652)
...+.|....+++|++.. .++++.+++.+.....+- + .-..|.| ++++..++.||.++..
T Consensus 267 ---~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 267 ---INHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp ---CSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred ---eeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 012355666677777765 467888877654322211 0 0013555 9999999999999742
Q ss_pred ------CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCC-EEEEEecCCCCCceEEEeecCC
Q psy5768 377 ------DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS-RIYWTNWNSHLPSIQRAFFSGF 436 (652)
Q Consensus 377 ------~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g-~Lywtd~~~~~~~I~r~~ldG~ 436 (652)
.++|.++++...+ .+-.+.....|.+|+++|... +||.+.|..+ .|...++...
T Consensus 343 gthk~~s~~VsVID~~T~k----vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~--~VsVID~~t~ 403 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETGE----RINKIELGHEIDSINVSQDAEPLLYALSAGTQ--TLHIYDAATG 403 (426)
T ss_dssp TCTTSCEEEEEEEETTTCC----EEEEEEEEEEECEEEECCSSSCEEEEEETTTT--EEEEEETTTC
T ss_pred ccccCCCCEEEEEECCCCe----EEEEEECCCCcCeEEEccCCCEEEEEEcCCCC--eEEEEECCCC
Confidence 3579999987632 333322234799999999888 8999998754 6766666443
No 110
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.89 E-value=1.7e-05 Score=83.58 Aligned_cols=134 Identities=11% Similarity=0.098 Sum_probs=83.4
Q ss_pred eEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEe--------CCCCCceE---EEEeCCCCEEEEEecCC------
Q psy5768 361 LAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRL--------GQHDKPRG---IDIDSCDSRIYWTNWNS------ 423 (652)
Q Consensus 361 lAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~--------~~~~~P~~---Iavdp~~g~Lywtd~~~------ 423 (652)
.+++..++.+||+. ..+.+.++++.+.. ...+-.. .....|.+ ++++|..++||++....
T Consensus 218 ~~~~~~~~~~~~~~-~~~~v~vid~~~~~--~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~ 294 (373)
T 2mad_H 218 PAQANKSGRIVWPV-YSGKILQADISAAG--ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred ceeEecCCEEEEEc-CCceEEEEeccCCc--ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccccc
Confidence 34555566777765 35678888775421 1111110 01123544 89999999999985421
Q ss_pred -CCCceEEEeecCCCceEEEEcCC-CCCceEEEecCCC-EEEEEeCCCCeEEEEecCCCceEEE-ecCCCCceeEEEEeC
Q psy5768 424 -HLPSIQRAFFSGFGTESIITTDI-TMPNALALDHQAE-KLFWGDARLDKIERCDYDGTNRIVL-SKISPLHPFDMAVYG 499 (652)
Q Consensus 424 -~~~~I~r~~ldG~~~~~l~~~~l-~~P~glaiD~~~~-~LYw~D~~~~~I~~~~ldG~~~~~l-~~~~~~~p~glav~~ 499 (652)
....|...++.... ++-.-.+ ..|.+|+++++++ +||.+....+.|..+|......... ...+ ..|++|.+++
T Consensus 295 ~~~~~V~VID~~t~~--vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG-~~P~~~~~~~ 371 (373)
T 2mad_H 295 AAAKEVTSVTGLVGQ--TSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG-SGPQVLSVMN 371 (373)
T ss_pred CCCCeEEEEECCCCE--EEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCC-CCCcEEEEcc
Confidence 12367776665433 3222222 3699999999998 7888877789999999986554433 3333 7899998765
Q ss_pred C
Q psy5768 500 E 500 (652)
Q Consensus 500 ~ 500 (652)
+
T Consensus 372 ~ 372 (373)
T 2mad_H 372 E 372 (373)
T ss_pred c
Confidence 3
No 111
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.89 E-value=8.3e-10 Score=77.04 Aligned_cols=37 Identities=30% Similarity=0.681 Sum_probs=34.1
Q ss_pred ccccCCCceeecc-CeecCCccCCCCCCCCCCCCCCCC
Q psy5768 590 NTVCSEHDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 590 ~~~C~~~~f~C~~-g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
...|.+.+|+|.+ |+||+..|+|||+.||.|||||..
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDN 41 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSS
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCC
Confidence 3568889999999 899999999999999999999976
No 112
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.88 E-value=1.1e-09 Score=74.73 Aligned_cols=34 Identities=32% Similarity=0.778 Sum_probs=31.8
Q ss_pred cCCCceeecc--CeecCCccCCCCCCCCCCCCCCCC
Q psy5768 593 CSEHDFKCSD--GMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 593 C~~~~f~C~~--g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
|.+.+|+|.+ ++|||..|+|||..||.|||||..
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~ 36 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEEN 36 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTT
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCccccc
Confidence 6778999997 899999999999999999999976
No 113
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.88 E-value=8.4e-10 Score=77.43 Aligned_cols=37 Identities=35% Similarity=0.735 Sum_probs=32.6
Q ss_pred ccccCCCceeeccCeecCCccCCCCCCCCCCCCCCCC
Q psy5768 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 590 ~~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
...|.+.+|+|.+|.||+..|+|||+.||.|||||..
T Consensus 5 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (44)
T 3a7q_B 5 AKECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDD 41 (44)
T ss_dssp ---CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSC
T ss_pred CCCCCCCceEcCCCCEeChhhccCCCCCCCCCccccC
Confidence 3468889999999999999999999999999999975
No 114
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.86 E-value=1.3e-09 Score=78.48 Aligned_cols=43 Identities=33% Similarity=0.742 Sum_probs=36.8
Q ss_pred ccccCCCceeec-cCeecCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy5768 590 NTVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRP 636 (652)
Q Consensus 590 ~~~C~~~~f~C~-~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~~C~~ 636 (652)
...|.+.+|+|. +|.||+..|+|||+.||.|||||.. |. .|.+
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~--C~--~C~~ 47 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESI--AA--GCLY 47 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSG--GG--TCCC
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCcccc--cc--CCCC
Confidence 356888999995 8999999999999999999999986 63 3654
No 115
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.83 E-value=6.1e-06 Score=86.59 Aligned_cols=216 Identities=9% Similarity=-0.021 Sum_probs=134.2
Q ss_pred ceEEEEEEEcCCCeEEEeec---------ccccEEEEeccCCcc-eEEee------ccCceeeeEEEccCCEEEEEeCC-
Q psy5768 314 KNIIELSYDYKRKTLFYSDI---------QKGTINSVFFNGSNH-RVLLE------RQGSVEGLAYEYVHNYLYWTCNN- 376 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~---------~~~~I~~~~~~g~~~-~~i~~------~~~~~~glAvDw~~~~LYwtd~~- 376 (652)
..+ .+++++..++||.++. ..+.|..+++..... ..+.. ....|.+|++++.++.||.++..
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 346 8999999999999974 245688888653222 22221 12479999999999999999976
Q ss_pred CCeEEEEEcCCCCCccEEEEE-eC----------CCCCceEEEEeCCCCEEEEEecCCCC--------------------
Q psy5768 377 DATINKIDLDSPKAQRIVVVR-LG----------QHDKPRGIDIDSCDSRIYWTNWNSHL-------------------- 425 (652)
Q Consensus 377 ~~~I~~~~~~~~~~~~~~~~~-~~----------~~~~P~~Iavdp~~g~Lywtd~~~~~-------------------- 425 (652)
.++|.++++... +.+.. .. ....++.+++.+....++|+......
T Consensus 130 ~~~v~v~d~~~~----~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (361)
T 2oiz_A 130 ATSIGIVDVAKG----DYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFI 205 (361)
T ss_dssp SEEEEEEETTTT----EEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCS
T ss_pred CCeEEEEECCCC----cEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEE
Confidence 688999998642 23222 11 11123446666655555554321110
Q ss_pred ---------------CceEEEeecCCCceEEEEcC--------CC-CCce---EEEecCCCEEEEEeC----------CC
Q psy5768 426 ---------------PSIQRAFFSGFGTESIITTD--------IT-MPNA---LALDHQAEKLFWGDA----------RL 468 (652)
Q Consensus 426 ---------------~~I~r~~ldG~~~~~l~~~~--------l~-~P~g---laiD~~~~~LYw~D~----------~~ 468 (652)
++|..+.+.+.....+-... .. .|.| +++++.+++||.+.. ..
T Consensus 206 ~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 206 APALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp CCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred EecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 12222333222222111100 11 2454 999999999999854 13
Q ss_pred CeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCC--ceEEEEecccCCcceeEE
Q psy5768 469 DKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTG--EEVYTLRKNIRRPMGIVA 538 (652)
Q Consensus 469 ~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g--~~~~~~~~~~~~p~~i~~ 538 (652)
+.|..+|+.......-+... . |.+|++. +.+||.+++ +.|..++..++ +.+..+..--..|.++.+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~-~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGR-D-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp SEEEEEETTTTEEEEEEECT-T-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred ceEEEEECCCCcEEEEEecC-C-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 57999998765443333433 3 9999996 569999986 88999999888 776666432356777654
No 116
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.81 E-value=5.3e-07 Score=97.61 Aligned_cols=276 Identities=13% Similarity=0.168 Sum_probs=140.6
Q ss_pred ceEEEEEEEcC---CCeEEEeecc------------cccEEEEeccCC--------cceEEee-----ccCceeeeEEEc
Q psy5768 314 KNIIELSYDYK---RKTLFYSDIQ------------KGTINSVFFNGS--------NHRVLLE-----RQGSVEGLAYEY 365 (652)
Q Consensus 314 ~~~~~v~~D~~---~~~lywsd~~------------~~~I~~~~~~g~--------~~~~i~~-----~~~~~~glAvDw 365 (652)
.-+.+|++++. ++.||++-.. ..+|.|+.+... ..++|++ ..+....|++++
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp 148 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP 148 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC
Confidence 44678999985 6788887532 147888887531 2344442 234566799998
Q ss_pred cCCEEEEEeCC-----------------CCeEEEEEcCCCC---------C--------ccEEEEEeCCCCCceEEEEeC
Q psy5768 366 VHNYLYWTCNN-----------------DATINKIDLDSPK---------A--------QRIVVVRLGQHDKPRGIDIDS 411 (652)
Q Consensus 366 ~~~~LYwtd~~-----------------~~~I~~~~~~~~~---------~--------~~~~~~~~~~~~~P~~Iavdp 411 (652)
.+ +||++-.. .++|.|++.++.. . .+..+.. ..+.+|.+|++||
T Consensus 149 DG-~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a-~G~RNp~gla~dp 226 (463)
T 2wg3_C 149 DG-FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA-HGLHDPGRCAVDR 226 (463)
T ss_dssp TS-CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE-ECCSSCCBEEEES
T ss_pred CC-cEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE-ECCCCcceEEECC
Confidence 55 89998543 3579999998831 0 0112333 4789999999999
Q ss_pred CCC------EEEEEec-CCC--CCceEEEeecCCCc---eEEEEcC-C--CCCceEEEec------CCCEEEEEeCCCCe
Q psy5768 412 CDS------RIYWTNW-NSH--LPSIQRAFFSGFGT---ESIITTD-I--TMPNALALDH------QAEKLFWGDARLDK 470 (652)
Q Consensus 412 ~~g------~Lywtd~-~~~--~~~I~r~~ldG~~~---~~l~~~~-l--~~P~glaiD~------~~~~LYw~D~~~~~ 470 (652)
..| +||.+|. +.. ...|.++. .|.+. ..++.-. - ..|.|+++-. -.+.+|++|.. ++
T Consensus 227 ~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~ 304 (463)
T 2wg3_C 227 HPTDININLTILCSDSNGKNRSSARILQII-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GN 304 (463)
T ss_dssp SCSSTTCSEEEEEECC------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SC
T ss_pred CCCCcccceEEEecccCCCCCCCCeEeeec-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-Cc
Confidence 754 7888886 322 12444432 23221 1222211 1 3678888842 23568889886 78
Q ss_pred EEEEecCCCc---eEEEe-c--------CCCCceeEEEEe-CCEEEEEcC-------CCCeEEEEEccCCceEEEEeccc
Q psy5768 471 IERCDYDGTN---RIVLS-K--------ISPLHPFDMAVY-GEFIFWTDW-------VIHAVLRANKYTGEEVYTLRKNI 530 (652)
Q Consensus 471 I~~~~ldG~~---~~~l~-~--------~~~~~p~glav~-~~~lYwtd~-------~~~~I~~~~k~~g~~~~~~~~~~ 530 (652)
|.++.+++.. ....+ . .....|.++++. ++.||++|+ ..++|+|+..-.... ....
T Consensus 305 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~~----~p~~ 380 (463)
T 2wg3_C 305 FLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPL----MPEE 380 (463)
T ss_dssp EEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSCS----SCGG
T ss_pred EEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCccccc----cccc
Confidence 9999887542 22222 1 113578999998 569999997 467788876321110 0000
Q ss_pred -CCcceeEEEeccCCCCCCCCCCCCCCCCcc-ccccCCCCceeeeccCceeeccCCcccCcccccCCCceeecc-CeecC
Q psy5768 531 -RRPMGIVAISDNLDACAKTPCRHLNGNCDD-ICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSD-GMCIP 607 (652)
Q Consensus 531 -~~p~~i~~~~~~~~~~~~~~C~~~ng~Cs~-lCl~~~~~~~~C~Cp~g~~l~~d~~C~~~~~~C~~~~f~C~~-g~Ci~ 607 (652)
...+. -..|....|.. .|.| .|.. ..+|.|+.||.. ..|. ...|.+ .|.| |.|+.
T Consensus 381 C~~~~~-------g~~c~~~~C~~---~C~nG~C~~----~~~C~C~~G~~G---~~C~--~~~C~~---~C~~~g~C~~ 438 (463)
T 2wg3_C 381 CRATVQ-------PAQTLTSECSR---LCRNGYCTP----TGKCCCSPGWEG---DFCR--TAKCEP---ACRHGGVCVR 438 (463)
T ss_dssp GCCCCC-------CCCCCCCHHHH---HCCSEEECT----TSCEEECTTEES---TTSC--EECC---------------
T ss_pred CCCCCc-------CCCCccccccC---CCCCCccCC----CCeECCCCCcCC---CcCC--cCcCCC---CCCCCCEECC
Confidence 00000 01122222321 1221 3443 258999999975 3574 345764 7887 58886
Q ss_pred CccCCCCCCCCCCCCCC
Q psy5768 608 FNQTCDRVYNCHDKSDE 624 (652)
Q Consensus 608 ~~~~Cd~~~dC~d~sde 624 (652)
. ..| .|..|.-.
T Consensus 439 ~-~~C----~C~~G~~G 450 (463)
T 2wg3_C 439 P-NKC----LCKKGYLG 450 (463)
T ss_dssp -----------------
T ss_pred C-CEE----ECCCCccc
Confidence 5 234 56655443
No 117
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.81 E-value=1.7e-05 Score=83.11 Aligned_cols=91 Identities=7% Similarity=0.099 Sum_probs=65.2
Q ss_pred EEEEcCCCeEEEeec----------ccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCC
Q psy5768 319 LSYDYKRKTLFYSDI----------QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSP 388 (652)
Q Consensus 319 v~~D~~~~~lywsd~----------~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~ 388 (652)
++|++..+++|.+.. ..+.|..+++........+..-. |.+||+++.++.||.++. ++|.++++...
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 678888899998754 13478888876543322233333 999999999999998885 89999987652
Q ss_pred CCccEEEEEe-CCCCCceEEEEeCCCC
Q psy5768 389 KAQRIVVVRL-GQHDKPRGIDIDSCDS 414 (652)
Q Consensus 389 ~~~~~~~~~~-~~~~~P~~Iavdp~~g 414 (652)
. .+.+-.+ .....|++|+++|..+
T Consensus 336 ~--l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 E--PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp S--CEEEEEETTSCSSEEEEEECCCSC
T ss_pred c--ceeeEEeccCCCCcEEEEecCCCC
Confidence 1 1455443 4568999999999644
No 118
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.80 E-value=2.4e-06 Score=87.28 Aligned_cols=200 Identities=8% Similarity=-0.033 Sum_probs=135.3
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeecc------CceeeeEEEccCCEEEEEeC-----------CC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ------GSVEGLAYEYVHNYLYWTCN-----------ND 377 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~------~~~~glAvDw~~~~LYwtd~-----------~~ 377 (652)
.+..+++++..+.+|+++...+.|..+++........+... ..|.++++++.++.||+++. ..
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 36678899988899999988889999998654333222211 26889999999999999962 35
Q ss_pred CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCce------------------
Q psy5768 378 ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTE------------------ 439 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~------------------ 439 (652)
+.|.++++.+. +.+........|.+++++|...+||+++. .|...++.+....
T Consensus 115 ~~i~v~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg 185 (337)
T 1pby_B 115 TRVALYDAETL----SRRKAFEAPRQITMLAWARDGSKLYGLGR-----DLHVMDPEAGTLVEDKPIQSWEAETYAQPDV 185 (337)
T ss_dssp CEEEEEETTTT----EEEEEEECCSSCCCEEECTTSSCEEEESS-----SEEEEETTTTEEEEEECSTTTTTTTBCCCBC
T ss_pred ceEEEEECCCC----cEEEEEeCCCCcceeEECCCCCEEEEeCC-----eEEEEECCCCcEeeeeeccccCCCceeCCCc
Confidence 78999998642 22222233567999999998888988731 2332222211000
Q ss_pred ------------------------------------EEEE------------cCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 440 ------------------------------------SIIT------------TDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 440 ------------------------------------~l~~------------~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
.++. .....|.++++++.+++||.++ +.|
T Consensus 186 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---~~v 262 (337)
T 1pby_B 186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY---NVL 262 (337)
T ss_dssp CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE---SEE
T ss_pred cEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeC---CeE
Confidence 0000 0112466799999999999984 789
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceEEEEec
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~ 528 (652)
..++++.......+... ..|.++++. +.+||.+. ..+.|...+..+++....+..
T Consensus 263 ~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~-~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 263 ESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGG-ALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEES-BSSEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEc-CCCcEEEEECcCCcEEEEEEc
Confidence 99998765544444433 578899886 45788874 467898899888877666653
No 119
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.79 E-value=1.9e-09 Score=76.92 Aligned_cols=36 Identities=36% Similarity=0.728 Sum_probs=32.8
Q ss_pred cccCCCceeec-----cCeecCCccCCCCCCCCCCCCCCCC
Q psy5768 591 TVCSEHDFKCS-----DGMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 591 ~~C~~~~f~C~-----~g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
..|.+.+|+|. ++.|||..|+|||..||.|||||..
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~ 45 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 45 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCC
Confidence 46888999998 7899999999999999999999976
No 120
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.77 E-value=0.00018 Score=79.97 Aligned_cols=352 Identities=9% Similarity=0.014 Sum_probs=197.1
Q ss_pred EECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC---CCc
Q psy5768 45 VWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT---GQY 121 (652)
Q Consensus 45 ~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d---g~~ 121 (652)
.|+ .+++|+++ ...++|..++.+.......+..+ ..|. ++++++.++.+|.+. ..+.|.++|+. ++.
T Consensus 163 ~d~-~~~~~V~~--~~~~~V~viD~~t~~v~~~i~~g--~~p~----~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~~~ 232 (567)
T 1qks_A 163 WDL-ENLFSVTL--RDAGQIALIDGSTYEIKTVLDTG--YAVH----ISRLSASGRYLFVIG-RDGKVNMIDLWMKEPTT 232 (567)
T ss_dssp CCG-GGEEEEEE--TTTTEEEEEETTTCCEEEEEECS--SCEE----EEEECTTSCEEEEEE-TTSEEEEEETTSSSCCE
T ss_pred cCC-CceEEEEe--CCCCeEEEEECCCCeEEEEEeCC--CCcc----ceEECCCCCEEEEEc-CCCeEEEEECCCCCCcE
Confidence 444 58999999 88899999998755433334444 2466 999999899999987 46799999994 443
Q ss_pred EEEEEeCCCCCceeEEEc----CCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCC
Q psy5768 122 RYVLISGGVDQPSALAVD----PESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKG 197 (652)
Q Consensus 122 ~~~l~~~~~~~P~~iavd----~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~ 197 (652)
...+.. + ..|++|+++ |...++|.++.. .+.|...+...-.....+... +..+| +.
T Consensus 233 v~~i~~-G-~~P~~ia~s~~~~pDGk~l~v~n~~-~~~v~ViD~~t~~~~~~i~~~-----~~~~~------------~~ 292 (567)
T 1qks_A 233 VAEIKI-G-SEARSIETSKMEGWEDKYAIAGAYW-PPQYVIMDGETLEPKKIQSTR-----GMTYD------------EQ 292 (567)
T ss_dssp EEEEEC-C-SEEEEEEECCSTTCTTTEEEEEEEE-TTEEEEEETTTCCEEEEEECC-----EECTT------------TC
T ss_pred eEEEec-C-CCCceeEEccccCCCCCEEEEEEcc-CCeEEEEECCCCcEEEEEecc-----ccccc------------cc
Confidence 333332 2 479999999 567799999864 345655543222221111110 11111 00
Q ss_pred cEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccccc
Q psy5768 198 NIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEY 277 (652)
Q Consensus 198 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~ 277 (652)
..+ ..+.+ ..|...+ ++
T Consensus 293 ~~~-------p~~rv-----------a~i~~s~---------------------------------------~~------ 309 (567)
T 1qks_A 293 EYH-------PEPRV-----------AAILASH---------------------------------------YR------ 309 (567)
T ss_dssp CEE-------SCCCE-----------EEEEECS---------------------------------------SS------
T ss_pred ccc-------CCCce-----------EEEEEcC---------------------------------------CC------
Confidence 000 00000 0000000 00
Q ss_pred ceEEEEe--eecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeec-
Q psy5768 278 DAFIMYS--RVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER- 354 (652)
Q Consensus 278 ~~~Ll~s--~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~- 354 (652)
+.++++ ....|..++..+...+. +..+.. -..+..+.||+..+++|.++..+++|..+++........+.-
T Consensus 310 -~~~vv~~~~~g~v~~vd~~~~~~~~--v~~i~~---~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg 383 (567)
T 1qks_A 310 -PEFIVNVKETGKILLVDYTDLNNLK--TTEISA---ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG 383 (567)
T ss_dssp -SEEEEEETTTTEEEEEETTCSSEEE--EEEEEC---CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred -CEEEEEecCCCeEEEEecCCCccce--eeeeec---cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc
Confidence 000000 11223333331111000 011111 134567789998889999998899999998875433333322
Q ss_pred cCce---eeeE-EEccCCEEEEEeC-CCCeEEEEEcCCCCCc---cEEEEEeC-CCCCceEEEEeCCCCEEEEEecCCC-
Q psy5768 355 QGSV---EGLA-YEYVHNYLYWTCN-NDATINKIDLDSPKAQ---RIVVVRLG-QHDKPRGIDIDSCDSRIYWTNWNSH- 424 (652)
Q Consensus 355 ~~~~---~glA-vDw~~~~LYwtd~-~~~~I~~~~~~~~~~~---~~~~~~~~-~~~~P~~Iavdp~~g~Lywtd~~~~- 424 (652)
-..| .|.. +++..+.+|.|.. +.++|.+++.+..+.. .+.+-.+. ....+..|.++|...+||++.....
T Consensus 384 g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 384 GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS
T ss_pred CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCC
Confidence 2234 3665 4666778877664 4589999998752110 12222222 2345677999999899998774321
Q ss_pred ---CCceEEEeecC-----CCce-EEEEc--------CCCCCceEEEecCCCEEEEEeC----CCCeEEEEecCCCceEE
Q psy5768 425 ---LPSIQRAFFSG-----FGTE-SIITT--------DITMPNALALDHQAEKLFWGDA----RLDKIERCDYDGTNRIV 483 (652)
Q Consensus 425 ---~~~I~r~~ldG-----~~~~-~l~~~--------~l~~P~glaiD~~~~~LYw~D~----~~~~I~~~~ldG~~~~~ 483 (652)
+..|...+++- .... .++.. .-..|..+.++..+++||++.. ..+.|..+|......+.
T Consensus 464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred cccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 12566665542 2332 22321 2346789999999999999854 35788887766544333
Q ss_pred Eec-CCCCceeEE
Q psy5768 484 LSK-ISPLHPFDM 495 (652)
Q Consensus 484 l~~-~~~~~p~gl 495 (652)
.+. ..+..|-|.
T Consensus 544 ~i~~~~~~~P~g~ 556 (567)
T 1qks_A 544 VIKDERLVTPTGK 556 (567)
T ss_dssp EECCTTCCSEEEE
T ss_pred EeCCCcccCCCee
Confidence 333 225677665
No 121
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.76 E-value=2.1e-09 Score=76.88 Aligned_cols=39 Identities=46% Similarity=0.996 Sum_probs=35.2
Q ss_pred cccCCCceeeccC-eecCCccCCCCCCCCCCCCCCCCCCCCC
Q psy5768 591 TVCSEHDFKCSDG-MCIPFNQTCDRVYNCHDKSDEGILYCAM 631 (652)
Q Consensus 591 ~~C~~~~f~C~~g-~Ci~~~~~Cd~~~dC~d~sde~~~~C~~ 631 (652)
..|.+.+|+|.++ .||+..|+|||+.||.|||||.. |..
T Consensus 5 ~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~--C~~ 44 (48)
T 2i1p_A 5 LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAG--CPT 44 (48)
T ss_dssp CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHS--SCS
T ss_pred CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCccccc--CCC
Confidence 4688899999999 89999999999999999999986 743
No 122
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.75 E-value=2.4e-09 Score=101.15 Aligned_cols=49 Identities=31% Similarity=0.621 Sum_probs=45.8
Q ss_pred ccCCCceee--ccCeecCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecC
Q psy5768 592 VCSEHDFKC--SDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCD 642 (652)
Q Consensus 592 ~C~~~~f~C--~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~~C~~~~f~C~ 642 (652)
.|.+.+|+| .+|+|||..|+|||.+||.|||||.. |..++|.+.+|+|.
T Consensus 54 ~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~--C~~~~C~~~~F~c~ 104 (215)
T 2gtl_O 54 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKD--CTLPTKAGDKFIGD 104 (215)
T ss_dssp SSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHC--CCCSSCTTCEEEEE
T ss_pred CCCCcceeeCCCCCcCccccccCCCCCcCCCcccccC--CCCCCcCCCceeee
Confidence 588899999 78999999999999999999999976 98889999999994
No 123
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.74 E-value=8e-06 Score=85.85 Aligned_cols=301 Identities=10% Similarity=0.035 Sum_probs=170.5
Q ss_pred EEEECCCCEEEEEeccCC----cceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeC---------CC
Q psy5768 43 IAVWPVKGKMFWSNVTKQ----VVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP---------KE 109 (652)
Q Consensus 43 v~~d~~~~~lyw~d~~~~----~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~---------~~ 109 (652)
+.-.|..+++|++| .. .++|+.++.+-.....-+..+ .. | +|++++.++.||+++. ..
T Consensus 38 ~~~~pd~~~vyV~~--~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~-----P-~va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPDARRVYVND--PAHFAAVTQQFVIDGEAGRVIGMIDGG-FL-----P-NPVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCTTEEEEEE--CGGGCSSEEEEEEETTTTEEEEEEEEC-SS-----C-EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCCCCEEEEEc--CcccCCCCEEEEEECCCCeEEEEEECC-CC-----C-cEEECCCCCEEEEEcccccccccCCCC
Confidence 44568899999999 54 568888887644322234444 22 3 6999999999999984 24
Q ss_pred CEEEEEEcCCCcE-EEEEeCC------CCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeec---ccCcee
Q psy5768 110 NVIEVARLTGQYR-YVLISGG------VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI---IMPIKD 179 (652)
Q Consensus 110 ~~I~v~~~dg~~~-~~l~~~~------~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~---~~~p~g 179 (652)
+.|.++|...... ..+.-.. ...|+.++++|...+||.++......|...++.......-+... ...|.|
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g 188 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTA 188 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCC
Confidence 6799998875432 3332111 24799999999988999998643457877776544332222111 112333
Q ss_pred ----EEEeccCCEEEEEeCCC-CcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceec
Q psy5768 180 ----ITLDLKFFSAFYRNLSK-GNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYN 254 (652)
Q Consensus 180 ----l~lD~~~~~ly~~d~~g-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~ 254 (652)
+++.. ++++.++++.. ++. +. .+. ++++..+ .|... |. .
T Consensus 189 ~~~~~~~~~-DG~~~~v~~~~~g~v--~~-----------~~~---------~~~~~~~----~~~~~-~~------~-- 232 (386)
T 3sjl_D 189 PDTFFMHCR-DGSLAKVAFGTEGTP--EI-----------THT---------EVFHPED----EFLIN-HP------A-- 232 (386)
T ss_dssp TTEEEEEET-TSCEEEEECCSSSCC--EE-----------EEC---------CCCSCTT----SCBCS-CC------E--
T ss_pred CceeEEECC-CCCEEEEECCCCCeE--EE-----------eec---------ceecccc----ccccc-cc------e--
Confidence 13333 23333333332 111 00 000 1111110 01110 00 0
Q ss_pred CCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeee---e---cccc--ceEEEEEEEcCCC
Q psy5768 255 GVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIR---N---STMM--KNIIELSYDYKRK 326 (652)
Q Consensus 255 ~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~---~---~~~~--~~~~~v~~D~~~~ 326 (652)
|...+| .+++.+....+..+++ ...... .+..+. . ..+. .....+++|...+
T Consensus 233 -----------~~~~dG-------~~~~vs~~g~V~v~d~-~~~~~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~ 292 (386)
T 3sjl_D 233 -----------YSQKAG-------RLVWPTYTGKIHQIDL-SSGDAK-FLPAVEALTEAERADGWRPGGWQQVAYHRALD 292 (386)
T ss_dssp -----------EETTTT-------EEEEEBTTSEEEEEEC-TTSSCE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred -----------eEcCCC-------cEEEEeCCCEEEEEEC-CCCcce-eecceeccccccccccccCCCcceeeECCCCC
Confidence 000122 2344455556666666 222110 111111 0 0000 0112366799999
Q ss_pred eEEEeec---------ccccEEEEeccCCcceEEeeccCceeeeEEEccCC-EEEEEeCCCCeEEEEEcCCCCCccEEEE
Q psy5768 327 TLFYSDI---------QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHN-YLYWTCNNDATINKIDLDSPKAQRIVVV 396 (652)
Q Consensus 327 ~lywsd~---------~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~-~LYwtd~~~~~I~~~~~~~~~~~~~~~~ 396 (652)
+||++.. ..++|..+++.......-+.--..|.+|+++..++ .||.++...+.|.+++... .+.+-
T Consensus 293 ~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t----~k~~~ 368 (386)
T 3sjl_D 293 RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES----GEELR 368 (386)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTT----CCEEE
T ss_pred eEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCC----CcEEE
Confidence 9999864 23679999886543332222223788999999987 7898899899999999864 34556
Q ss_pred EeCCCCCceEEEEeCC
Q psy5768 397 RLGQHDKPRGIDIDSC 412 (652)
Q Consensus 397 ~~~~~~~P~~Iavdp~ 412 (652)
......+|..|++.+.
T Consensus 369 ~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 369 SVNQLGHGPQVITTAD 384 (386)
T ss_dssp EECCCCSSCCEEEECC
T ss_pred EecCCCCCceeEECCc
Confidence 6677899999998774
No 124
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.73 E-value=3.1e-07 Score=99.53 Aligned_cols=156 Identities=16% Similarity=0.255 Sum_probs=113.1
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe--e-------ccCceeeeEEEcc---CCEEEEEeCC--
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL--E-------RQGSVEGLAYEYV---HNYLYWTCNN-- 376 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~--~-------~~~~~~glAvDw~---~~~LYwtd~~-- 376 (652)
..+..+.+|++++. ++||+++...++|+++...+...+.+. . +...+.|||+++. ++.||++++.
T Consensus 24 ~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 24 SNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 45678999999986 579999988778999986432233332 1 3456779999987 8999999863
Q ss_pred ----------CCeEEEEEcCCCCCc---cEEEEE-e--CCCCCceEEEEeCCCCEEEEEecCC-----------------
Q psy5768 377 ----------DATINKIDLDSPKAQ---RIVVVR-L--GQHDKPRGIDIDSCDSRIYWTNWNS----------------- 423 (652)
Q Consensus 377 ----------~~~I~~~~~~~~~~~---~~~~~~-~--~~~~~P~~Iavdp~~g~Lywtd~~~----------------- 423 (652)
..+|.++.++..... .++++. + .....+.+|+++| .|+||++....
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~ 181 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHT 181 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccc
Confidence 357888887543211 234442 2 2346799999999 68999995431
Q ss_pred -------------CCCceEEEeecCCC----------ceEEEEcCCCCCceEEEecCCCEEEEEeCCCC
Q psy5768 424 -------------HLPSIQRAFFSGFG----------TESIITTDITMPNALALDHQAEKLFWGDARLD 469 (652)
Q Consensus 424 -------------~~~~I~r~~ldG~~----------~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~ 469 (652)
..++|.|.+.||+- +..++...++.|.||++|. +++||.+|.+.+
T Consensus 182 p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 182 PTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGPN 249 (454)
T ss_dssp CCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECSS
T ss_pred cccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCCC
Confidence 13689999999982 2346667889999999998 699999997544
No 125
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.70 E-value=6.2e-06 Score=86.55 Aligned_cols=275 Identities=6% Similarity=-0.071 Sum_probs=155.2
Q ss_pred cCCcEEEEeCCCC----EEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecC-------C-CCeEEEEeCCCCC
Q psy5768 98 IAQNIYWSDPKEN----VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG-------K-IPLIARAGLDGKK 165 (652)
Q Consensus 98 ~~~~lY~~d~~~~----~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~-------~-~~~I~~~~ldg~~ 165 (652)
...++|+++...+ .|.++|++.....--+..+ ..| +++++|..++||.++++ + ...|...++....
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 4578999998777 8889998765443333333 468 99999999999999842 1 2457777765433
Q ss_pred cEEEEeec-------ccCceeEEEeccCCEEEEEeCCCCcEEEE-EecCCCCceEEEeecCCCCCcceeeeeeeccCCCC
Q psy5768 166 QTILAQEI-------IMPIKDITLDLKFFSAFYRNLSKGNIHII-SLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGT 237 (652)
Q Consensus 166 ~~~~~~~~-------~~~p~gl~lD~~~~~ly~~d~~g~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~ 237 (652)
..--+.-. ...|.+|++++.+++||+.++...+.-.+ +.+..+ ... + + .
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v~~--i-~-v------------------ 164 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-DQL--T-K-S------------------ 164 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-EEE--E-E-C------------------
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-ceE--E-E-C------------------
Confidence 32222111 24699999999999999998753332222 011111 111 0 0 0
Q ss_pred CCCCCCCCCCcccceecCC-CceEEEeCCcc-----cc----CCCc---------------cccc-ceEEEEeeecceeE
Q psy5768 238 NPCGVNNGGCAELCLYNGV-SAVCACAHGVV-----AQ----DGKS---------------CSEY-DAFIMYSRVNRIDS 291 (652)
Q Consensus 238 n~C~~~ng~Cs~lC~~~~~-~~~C~C~~G~l-----~~----dg~~---------------C~~~-~~~Ll~s~~~~i~~ 291 (652)
++|.|+- ..+. .|...|+.|.+ .. +++- .... ..+++.+. +.+..
T Consensus 165 -------~~~~~~~-p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~v 235 (368)
T 1mda_H 165 -------ASCFHIH-PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQ 235 (368)
T ss_dssp -------SSCCCCE-EEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEE
T ss_pred -------CCceEEc-cCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEE
Confidence 1122210 0000 12222222210 00 0000 0111 12333344 67777
Q ss_pred EecCCCCCCCCCceeeeec-----cccceEEE---EEEEcCCCeEEEeec---c-----cccEEEEeccCCcceEEeecc
Q psy5768 292 IHMTDKSDLNSPFESIRNS-----TMMKNIIE---LSYDYKRKTLFYSDI---Q-----KGTINSVFFNGSNHRVLLERQ 355 (652)
Q Consensus 292 i~l~~~~~~~~p~~~~~~~-----~~~~~~~~---v~~D~~~~~lywsd~---~-----~~~I~~~~~~g~~~~~i~~~~ 355 (652)
+++. ..... .+..+... .....+.+ +++++..+++|++.. . .+.+..+++.......-+..-
T Consensus 236 iD~~-~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg 313 (368)
T 1mda_H 236 GDIP-AAGAT-MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG 313 (368)
T ss_dssp EECC-SSCCE-EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE
T ss_pred EECC-CCcce-EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC
Confidence 7762 21100 00111000 00012223 678999999999864 2 244557776543222222222
Q ss_pred CceeeeEEEccCCEEEEEeC-CCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCC
Q psy5768 356 GSVEGLAYEYVHNYLYWTCN-NDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSC 412 (652)
Q Consensus 356 ~~~~glAvDw~~~~LYwtd~-~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~ 412 (652)
..|.||++++.++.||++.. ..+.|.++++.. .+.+-.......|.+|++++.
T Consensus 314 ~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t----~kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS----DQDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp EEECEEEECCSSSCEEEEEETTTTEEEEEESSS----CEEEEECCCCSCCCEEECCCC
T ss_pred CCcceEEECCCCCEEEEEccCCCCeEEEEECCC----CcEEEEEECCCCCCEEEeecC
Confidence 37999999999999999998 689999999875 466666777899999999874
No 126
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.69 E-value=3.4e-09 Score=75.63 Aligned_cols=36 Identities=36% Similarity=0.743 Sum_probs=33.0
Q ss_pred cccCCCceeec-----cCeecCCccCCCCCCCCCCCCCCCC
Q psy5768 591 TVCSEHDFKCS-----DGMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 591 ~~C~~~~f~C~-----~g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
..|.+.+|+|. ++.|||..|+|||+.||.|||||..
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~ 43 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 43 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCccccc
Confidence 46888999998 6799999999999999999999975
No 127
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.68 E-value=5.7e-09 Score=98.60 Aligned_cols=60 Identities=25% Similarity=0.428 Sum_probs=48.9
Q ss_pred ccccCCCceeecc--CeecCCccCCCCCCCCCCCCCCCCCCCCCC-CCCCCeeec--CCCCcccC
Q psy5768 590 NTVCSEHDFKCSD--GMCIPFNQTCDRVYNCHDKSDEGILYCAMR-DCRPGYFKC--DNNKCILS 649 (652)
Q Consensus 590 ~~~C~~~~f~C~~--g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~-~C~~~~f~C--~~~~Ci~~ 649 (652)
...|.+.+|+|.+ |.||+..|.|||++||.|||||....|... .|...+|.+ .++.|...
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~~~~~~~~~~~~g~~~~~~C~~~ 115 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSLNITHVGSSYTGLATWTSCEDL 115 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHCCGGGCTTCEEEEEEEESSSCSC
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCCCCcccCCcccccccCcccCCCC
Confidence 4579999999975 899999999999999999999984458776 666666665 56788654
No 128
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.66 E-value=5.9e-09 Score=80.85 Aligned_cols=45 Identities=29% Similarity=0.637 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCcccceecCC-CceEEEeCCc-cccCCCcccccceE
Q psy5768 236 GTNPCGVNNGGCAELCLYNGV-SAVCACAHGV-VAQDGKSCSEYDAF 280 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~lC~~~~~-~~~C~C~~G~-l~~dg~~C~~~~~~ 280 (652)
++|+|..+||+|+|+|+..++ +|+|.|+.|| |..|+++|.+..+|
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec 50 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 50 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCcccc
Confidence 579999999999999998887 7999999998 67899999876554
No 129
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.64 E-value=1.5e-06 Score=85.85 Aligned_cols=182 Identities=14% Similarity=0.105 Sum_probs=117.0
Q ss_pred EEEEeeec----ceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeecc
Q psy5768 280 FIMYSRVN----RIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ 355 (652)
Q Consensus 280 ~Ll~s~~~----~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~ 355 (652)
.|+.+++. .|+.+++..+ . ....+..+. -....+++++ .++||.++...+.++.++.+......-+.-
T Consensus 54 ~LyestG~~g~S~v~~vD~~Tg-k---v~~~~~l~~-~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~- 125 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIESG-K---TLQQIELGK-RYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNY- 125 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTTC-C---EEEEEECCT-TCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEEC-
T ss_pred EEEEECCCCCCceEEEEECCCC-c---EEEEEecCC-ccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEEC-
Confidence 57777754 6888887333 2 112232211 1224567766 679999999999999999865332222222
Q ss_pred CceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCC----CCCceEEEEeCCCCEEEEEecCCCCCceEEE
Q psy5768 356 GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQ----HDKPRGIDIDSCDSRIYWTNWNSHLPSIQRA 431 (652)
Q Consensus 356 ~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~----~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~ 431 (652)
.++|.++.+.++.||.+|. .++|.+++..... ....+.... ...+..+... .|.||...|..+ .|.+.
T Consensus 126 -~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~--v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~--~I~vI 197 (262)
T 3nol_A 126 -DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLT--PVRTITVTAHGEELPELNELEWV--DGEIFANVWQTN--KIVRI 197 (262)
T ss_dssp -SSCCCCEEECSSCEEECCS-SSEEEEECTTTCS--EEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSS--EEEEE
T ss_pred -CCCceEEecCCCEEEEECC-CCeEEEEcCCCCe--EEEEEEeccCCccccccceeEEE--CCEEEEEEccCC--eEEEE
Confidence 2355555566899999996 7899999976543 122222211 1333445554 789999999865 78887
Q ss_pred eecCCCceEEEEc-C-----------CCCCceEEEecCCCEEEEEeCCCCeEEEEecC
Q psy5768 432 FFSGFGTESIITT-D-----------ITMPNALALDHQAEKLFWGDARLDKIERCDYD 477 (652)
Q Consensus 432 ~ldG~~~~~l~~~-~-----------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld 477 (652)
+.........+.. . ..-|||||+|+.+++||++-..-.+++.+.+.
T Consensus 198 Dp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 198 DPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp CTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 7654433333322 1 23579999999999999999888888887764
No 130
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.61 E-value=5.2e-06 Score=87.17 Aligned_cols=214 Identities=6% Similarity=-0.063 Sum_probs=135.7
Q ss_pred eEEEEEEEcCCCeEEEeec---------ccccEEEEeccCCcc-eEEeec-------cCceeeeEEEccCCEEEEEeCC-
Q psy5768 315 NIIELSYDYKRKTLFYSDI---------QKGTINSVFFNGSNH-RVLLER-------QGSVEGLAYEYVHNYLYWTCNN- 376 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~---------~~~~I~~~~~~g~~~-~~i~~~-------~~~~~glAvDw~~~~LYwtd~~- 376 (652)
.+ ++.+++..++||+++. ..+.|..+++..... ..+--+ ...|.+|++++.++.||.++..
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 35 8999999999999983 467899998765332 233222 2479999999999999999875
Q ss_pred CCeEEE--EEcCCC-----------------------CCccEEEEEeCC------------------CCCceEEEEeCCC
Q psy5768 377 DATINK--IDLDSP-----------------------KAQRIVVVRLGQ------------------HDKPRGIDIDSCD 413 (652)
Q Consensus 377 ~~~I~~--~~~~~~-----------------------~~~~~~~~~~~~------------------~~~P~~Iavdp~~ 413 (652)
.+.+.+ +++... ..+...++.... ...|. + .+..
T Consensus 146 ~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~ 222 (368)
T 1mda_H 146 SAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYP 222 (368)
T ss_dssp SCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTT
T ss_pred CCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccC
Confidence 466776 554210 000001111110 12343 3 4555
Q ss_pred CEEEEEecCCCCCceEEEeecCCCceEEEEcCC---------CCCce---EEEecCCCEEEEEeC---C-----CCeEEE
Q psy5768 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDI---------TMPNA---LALDHQAEKLFWGDA---R-----LDKIER 473 (652)
Q Consensus 414 g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l---------~~P~g---laiD~~~~~LYw~D~---~-----~~~I~~ 473 (652)
+.+||+.. ..+...++.+...+++....+ ..|.| ++++.++++||++.. + .+.+..
T Consensus 223 ~~~~~vs~----~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 223 GMLVWAVA----SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298 (368)
T ss_dssp TEEEECBS----SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEE
T ss_pred CEEEEEcC----CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEE
Confidence 66677665 267667766544333222111 13556 899999999999854 3 245557
Q ss_pred EecCCCceEEEecCCCCceeEEEEe--CCEEEEEcC-CCCeEEEEEccCCceEEEEecccCCcceeEE
Q psy5768 474 CDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDW-VIHAVLRANKYTGEEVYTLRKNIRRPMGIVA 538 (652)
Q Consensus 474 ~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~-~~~~I~~~~k~~g~~~~~~~~~~~~p~~i~~ 538 (652)
+|+....+..-+..+ ..|.+|++. +.++|++.. ..+.|..+|..+++.++.+..+ ..|.+|.+
T Consensus 299 iD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~i~~ 364 (368)
T 1mda_H 299 VTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPESLSV 364 (368)
T ss_dssp EESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCEEEC
T ss_pred EECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCEEEe
Confidence 777654433222222 479999997 347999988 7999999999998877777643 46777643
No 131
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.61 E-value=3.8e-05 Score=75.10 Aligned_cols=188 Identities=14% Similarity=0.020 Sum_probs=123.6
Q ss_pred eEEEEEEEcCCCeEEEeecc--cccEEEEeccCCcceEEeeccCce--eeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQ--KGTINSVFFNGSNHRVLLERQGSV--EGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~--~~~I~~~~~~g~~~~~i~~~~~~~--~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
...|+.||. ++||.+... ..+|.++++.......-+.--..+ +||+++ ++.||......+.+.+++....
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl-- 95 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATL-- 95 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTT--
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcC--
Confidence 356899986 789999765 358999998754332222222234 566665 8999999999999999998653
Q ss_pred ccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-----CCCCCceEEEecCCCEEEEEe
Q psy5768 391 QRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-----DITMPNALALDHQAEKLFWGD 465 (652)
Q Consensus 391 ~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~P~glaiD~~~~~LYw~D 465 (652)
+.+-.......+.+|+ +..+.||.+|. + .+|...+...-....-+.. .+..+|.|.. .+++||...
T Consensus 96 --~~~~ti~~~~~Gwglt--~dg~~L~vSdg-s--~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~--~~G~lyanv 166 (243)
T 3mbr_X 96 --TPRARFRYPGEGWALT--SDDSHLYMSDG-T--AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW--VNGELLANV 166 (243)
T ss_dssp --EEEEEEECSSCCCEEE--ECSSCEEEECS-S--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEE--ETTEEEEEE
T ss_pred --cEEEEEeCCCCceEEe--eCCCEEEEECC-C--CeEEEEeCCCCeEEEEEEEccCCcccccceeeEE--eCCEEEEEE
Confidence 3333333334566666 44689999994 3 3776665443332221221 1334555554 489999888
Q ss_pred CCCCeEEEEecCCCceEEEec-C------------CCCceeEEEEe--CCEEEEEcCCCCeEEEEEc
Q psy5768 466 ARLDKIERCDYDGTNRIVLSK-I------------SPLHPFDMAVY--GEFIFWTDWVIHAVLRANK 517 (652)
Q Consensus 466 ~~~~~I~~~~ldG~~~~~l~~-~------------~~~~p~glav~--~~~lYwtd~~~~~I~~~~k 517 (652)
...+.|.++|.........+. . ...-|.|||++ +++||+|.-.=..++++..
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 889999999986544333322 1 12368999998 5799999877778877654
No 132
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=98.59 E-value=1.3e-08 Score=81.40 Aligned_cols=51 Identities=33% Similarity=0.710 Sum_probs=42.9
Q ss_pred eccCceeeccC-CcccCcccccCCCceeeccCeecCCccCCCCCCCCCCCCCCCCCCC
Q psy5768 573 SCFTGKVLMED-NRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629 (652)
Q Consensus 573 ~Cp~g~~l~~d-~~C~~~~~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C 629 (652)
.|++| +| ..|.. ..|.+.+|+|.+|.|||..|+|||..||.|||||....|
T Consensus 27 DC~Dg----SDE~~C~~--~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~~C 78 (80)
T 2fcw_B 27 DCLDG----SDEASCPV--LTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 78 (80)
T ss_dssp CSTTC----TTTTTHHH--HHCCTTEEECTTSCEEEGGGTTSSSCCSTTCGGGCGGGC
T ss_pred cCCCc----cccccccc--ccCCceeeECCCCCEEecccccCCCcCCCCCCCcCcccC
Confidence 57777 56 66753 468899999999999999999999999999999965446
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.58 E-value=0.0011 Score=79.48 Aligned_cols=408 Identities=11% Similarity=0.037 Sum_probs=220.5
Q ss_pred CeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEecc---CCcceEEEEEcCCCccEEEEeCCCcCCc-
Q psy5768 11 SKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVT---KQVVTIEMAFMDGTKRETVVSQKKYPAV- 86 (652)
Q Consensus 11 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~---~~~~~I~~~~~dgs~~~~v~~~~~~~~p- 86 (652)
+.|++++++|.....+... -..+..++++|.+.+|.|+... .+...|+.+++++.....+ +.. -...
T Consensus 33 ~~l~~~~~~gg~~~~lt~~-------~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~l-t~~-~~~~~ 103 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSN-------LGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI-TYF-SGKST 103 (1045)
T ss_dssp TEEEEEETTTCCEEEEECS-------SSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC-CCC-CEEEE
T ss_pred CcEEEEECCCCcEEEeeeC-------CCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEc-ccC-CCccc
Confidence 6899999998777666642 2467899999999999987511 1345899999988754443 222 1112
Q ss_pred ------cCCCCcEEEEccCCcEEEEeC------CCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEe-----
Q psy5768 87 ------TACNLHIAVDWIAQNIYWSDP------KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE----- 149 (652)
Q Consensus 87 ------~~~~~~lavDw~~~~lY~~d~------~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd----- 149 (652)
. ++++.+.++ |+++.. ....|.+.++++...+.+... ....+++.| |.+|...
T Consensus 104 ~~~~~~~----~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~---~~~~~~~sp--G~l~~~~~~~~~ 173 (1045)
T 1k32_A 104 GRRMFTD----VAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLG---PATHILFAD--GRRVIGRNTFEL 173 (1045)
T ss_dssp TTEECSE----EEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSC---SCSEEEEET--TEEEEEESCSCC
T ss_pred ccccccc----cccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCC---CcceeeeCC--CEEEEeccCCCc
Confidence 4 566665555 666544 235788888887655444332 234566777 5554432
Q ss_pred --c-----CCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecC-CCCceEEEeecCCCC
Q psy5768 150 --S-----GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSN-LSDVSTISMKPYGDS 221 (652)
Q Consensus 150 --~-----~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~-~~~~~~~~~~~~~~~ 221 (652)
| +....|+..... .....+ ...-.....++.+.. +||++....+..+....+. +..... +..
T Consensus 174 ~~~~~~~g~~~~~lw~~~~~-~~~~~l-~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~--l~~---- 243 (1045)
T 1k32_A 174 PHWKGYRGGTRGKIWIEVNS-GAFKKI-VDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRK--HTS---- 243 (1045)
T ss_dssp TTSTTCCSTTCCEEEEEEET-TEEEEE-ECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEE--CCC----
T ss_pred cccccccCCCcCCEEEECCC-CCeEEC-cCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceE--ecC----
Confidence 1 123355554333 222222 221233444555432 5555432222222211110 000000 000
Q ss_pred CcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCC
Q psy5768 222 YLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLN 301 (652)
Q Consensus 222 ~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~ 301 (652)
+. .. .....-|.| ..|+++....|+.+++ ....+
T Consensus 244 -----------------------~~-~~-------~~~~~SpDG-------------~~la~~~~~~i~~~d~-~~~~l- 277 (1045)
T 1k32_A 244 -----------------------FT-DY-------YPRHLNTDG-------------RRILFSKGGSIYIFNP-DTEKI- 277 (1045)
T ss_dssp -----------------------CC-SS-------CEEEEEESS-------------SCEEEEETTEEEEECT-TTCCE-
T ss_pred -----------------------CC-Cc-------ceeeEcCCC-------------CEEEEEeCCEEEEecC-CceEe-
Confidence 00 00 000111122 1233333344444443 11110
Q ss_pred CCceeeeec---------cccceEEEEEEE-cCCCeEEEeecccccEEEEeccCCcceEEeeccC-ceeeeEEEccCCEE
Q psy5768 302 SPFESIRNS---------TMMKNIIELSYD-YKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQG-SVEGLAYEYVHNYL 370 (652)
Q Consensus 302 ~p~~~~~~~---------~~~~~~~~v~~D-~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~-~~~glAvDw~~~~L 370 (652)
..+... .....+.++++. +..++|.++. .+.|+.+++.+.....+..... .+.++++. .++.|
T Consensus 278 ---~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l 351 (1045)
T 1k32_A 278 ---EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAF 351 (1045)
T ss_dssp ---EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEE
T ss_pred ---eeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeE
Confidence 001000 001124567788 7777777765 4677777776544333322222 45566665 56677
Q ss_pred EEEeCCCCeEE-EEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCC
Q psy5768 371 YWTCNNDATIN-KIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMP 449 (652)
Q Consensus 371 Ywtd~~~~~I~-~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P 449 (652)
+++.. ...++ +.++.+.. ... +. .....+..++++|...+|+++... ..|...++++.....+........
T Consensus 352 ~~~s~-~~~l~~~~d~~~~~--~~~-l~-~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~tg~~~~~~~~~~~~v 423 (1045)
T 1k32_A 352 IHGTR-EGDFLGIYDYRTGK--AEK-FE-ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLETGKPTVIERSREAMI 423 (1045)
T ss_dssp EEEET-TEEEEEEEETTTCC--EEE-CC-CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEEEEECSSSCC
T ss_pred EEEEC-CCceEEEEECCCCC--ceE-ec-CCccceeeeEECCCCCEEEEECCC---CeEEEEECCCCceEEeccCCCCCc
Confidence 77665 56788 78876532 222 22 344678899999988888877643 378888887666655554333445
Q ss_pred ceEEEecCCCEEEEEeCC---------CCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCC
Q psy5768 450 NALALDHQAEKLFWGDAR---------LDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWV 508 (652)
Q Consensus 450 ~glaiD~~~~~LYw~D~~---------~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~ 508 (652)
.++++.+++++|.++... ...|...++++.....+.. ....+.++++. +.+|||....
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~-~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT-ENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC-SSSBEEEEEECTTSCEEEEEESC
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC-CCcccCCceEcCCCCEEEEEecc
Confidence 789999999999887542 2579999998765444333 23456677765 5588887643
No 134
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.58 E-value=1.5e-08 Score=78.55 Aligned_cols=41 Identities=24% Similarity=0.568 Sum_probs=37.4
Q ss_pred CCCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 548 KTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 548 ~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
.++|..+||+|+|+|+.+++++|+|+|+.||.|..| ++|.+
T Consensus 5 ~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 5 QLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp CCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred cccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 588999999999999998876799999999999999 89986
No 135
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.57 E-value=2.5e-05 Score=77.10 Aligned_cols=186 Identities=13% Similarity=0.049 Sum_probs=121.9
Q ss_pred EEEEEEEcCCCeEEEeeccc--ccEEEEeccCCcceEEeeccCce--eeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy5768 316 IIELSYDYKRKTLFYSDIQK--GTINSVFFNGSNHRVLLERQGSV--EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ 391 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~--~~I~~~~~~g~~~~~i~~~~~~~--~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~ 391 (652)
..++.|+ +++||.+.... .+|.++++.......-+.--..+ +||+++ ++.||.+....+.+.+++....+
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~-- 118 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR-- 118 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC--
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc--
Confidence 4688998 57999998654 48999998754332222211233 667776 89999999999999999987643
Q ss_pred cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-----CCCCCceEEEecCCCEEEEEeC
Q psy5768 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-----DITMPNALALDHQAEKLFWGDA 466 (652)
Q Consensus 392 ~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~P~glaiD~~~~~LYw~D~ 466 (652)
.+-.......+.+++- ..+.||.+|. + .+|...+........-+.. .+..+|.|... +++||....
T Consensus 119 --~~~ti~~~~eG~glt~--dg~~L~~SdG-s--~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w 189 (262)
T 3nol_A 119 --QVRSFNYDGEGWGLTH--NDQYLIMSDG-T--PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVW 189 (262)
T ss_dssp --EEEEEECSSCCCCEEE--CSSCEEECCS-S--SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEET
T ss_pred --EEEEEECCCCceEEec--CCCEEEEECC-C--CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEc
Confidence 2222222335556664 4688999984 3 3777665543322111111 23455666654 789999998
Q ss_pred CCCeEEEEecCCCceEEEecC-C-----------CCceeEEEEe--CCEEEEEcCCCCeEEEEE
Q psy5768 467 RLDKIERCDYDGTNRIVLSKI-S-----------PLHPFDMAVY--GEFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 467 ~~~~I~~~~ldG~~~~~l~~~-~-----------~~~p~glav~--~~~lYwtd~~~~~I~~~~ 516 (652)
..+.|.++|.........+.. . ..-|.|||+. ++.||+|.-.=..++++.
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~ 253 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEIT 253 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEE
Confidence 899999999865443333322 1 2367999998 579999987777887764
No 136
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.55 E-value=2.5e-06 Score=87.02 Aligned_cols=158 Identities=15% Similarity=0.007 Sum_probs=110.9
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCc---CCccCCCCcEEE---EccCCcEEE-EeC-
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY---PAVTACNLHIAV---DWIAQNIYW-SDP- 107 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~---~~p~~~~~~lav---Dw~~~~lY~-~d~- 107 (652)
.--.|.+++||..++++|+++ .-.++|.++++++...+.+.-.+ + ..+.-.|.||.+ |.. ++|++ ++.
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~--l~~g~V~~~~~~~~~~~~~~~~~-~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~ 86 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSN--LYKGRIEVYNPKTQSHFNVVIDG-ASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNA 86 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEE--TTTTEEEEECTTTCCEEEECCTT-TCCSSCCSEEEEEEEESSSSSC-CEEEEEEEET
T ss_pred cccCCcCccCcCCCCEEEEEe--ccCCEEEEEcCCCCeEEEEecCC-ccccCCCcceeeEEEEeccCCC-CcEEEEEccc
Confidence 345788999999999999999 88899999999865444442222 2 122222339999 665 77877 552
Q ss_pred -----------CCCEEEEEEcC----CCcEEEE-EeC-----------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5768 108 -----------KENVIEVARLT----GQYRYVL-ISG-----------GVDQPSALAVDPESGYLFWSESGKIPLIARAG 160 (652)
Q Consensus 108 -----------~~~~I~v~~~d----g~~~~~l-~~~-----------~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ 160 (652)
....+.+.+++ |+....+ +.. ....|.++++|+ .|..|+|+....+.|.|.+
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEEC
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEe
Confidence 35779999998 5433222 111 122488999998 8999999975327999999
Q ss_pred CCCCCcEEEEeec-----ccCceeEEEeccCCEEEEEeCCCCcE
Q psy5768 161 LDGKKQTILAQEI-----IMPIKDITLDLKFFSAFYRNLSKGNI 199 (652)
Q Consensus 161 ldg~~~~~~~~~~-----~~~p~gl~lD~~~~~ly~~d~~g~~~ 199 (652)
.||+....+.... ..-++||++++.+.+|+..+. ++..
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L 208 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRAL 208 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSE
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeE
Confidence 9999666554322 223789999999989988877 4544
No 137
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.54 E-value=3.5e-06 Score=83.18 Aligned_cols=158 Identities=16% Similarity=0.127 Sum_probs=108.5
Q ss_pred eeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCC
Q psy5768 358 VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFG 437 (652)
Q Consensus 358 ~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~ 437 (652)
..||+++ ++.||.+....++|.++++...+. .+.+ +.......||+++ .+.||.++|... .+...+.+.
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv-~~~~--l~~~~FgeGit~~--g~~Ly~ltw~~~--~v~V~D~~T-- 125 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQP-VWME--RLGNIFAEGLASD--GERLYQLTWTEG--LLFTWSGMP-- 125 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSC-SEEE--ECTTCCEEEEEEC--SSCEEEEESSSC--EEEEEETTT--
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcE-EeEE--CCCCcceeEEEEe--CCEEEEEEccCC--EEEEEECCc--
Confidence 4799998 689999999999999998865432 2333 2322223446665 579999999754 777766543
Q ss_pred ceEEEEcCC-CCCceEEEecCCCEEEEEeCCCCeEEEEecCCCce-EEEecCC----CCceeEEEEeCCEEEEEcCCCCe
Q psy5768 438 TESIITTDI-TMPNALALDHQAEKLFWGDARLDKIERCDYDGTNR-IVLSKIS----PLHPFDMAVYGEFIFWTDWVIHA 511 (652)
Q Consensus 438 ~~~l~~~~l-~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~-~~l~~~~----~~~p~glav~~~~lYwtd~~~~~ 511 (652)
.+.+-+-.. ..+.||+-| +++||.+| +.++|..+|...... ..+.... ...+-.|...++.||...|.++.
T Consensus 126 l~~~~ti~~~~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~ 202 (268)
T 3nok_A 126 PQRERTTRYSGEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSD 202 (268)
T ss_dssp TEEEEEEECSSCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSE
T ss_pred CcEEEEEeCCCceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCe
Confidence 333322221 234466655 89999999 588999999876432 2222111 23445677778999999999999
Q ss_pred EEEEEccCCceEEEEecc
Q psy5768 512 VLRANKYTGEEVYTLRKN 529 (652)
Q Consensus 512 I~~~~k~~g~~~~~~~~~ 529 (652)
|.++|..+|+...++...
T Consensus 203 I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEEECTTTCBEEEEEECH
T ss_pred EEEEeCCCCcEEEEEECC
Confidence 999999999988887643
No 138
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.54 E-value=5.8e-06 Score=86.02 Aligned_cols=177 Identities=11% Similarity=0.059 Sum_probs=112.1
Q ss_pred CCCeEEEEecCCC--eeEEEecCCCCCCCCCCCeeEEEEECC---CCEEEEEeccCCcceE--EEEEcCCCccEEEEeC-
Q psy5768 9 TQSKIVVCNLEGE--YQTTILSNESNDTSTLSKISSIAVWPV---KGKMFWSNVTKQVVTI--EMAFMDGTKRETVVSQ- 80 (652)
Q Consensus 9 ~~~~I~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~v~~d~~---~~~lyw~d~~~~~~~I--~~~~~dgs~~~~v~~~- 80 (652)
..+.|+++|++.. ....+.-...+....-=+|+||++... +.+||+.|-.....+| .+...++.. .+++.+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~-~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS-LLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE-EEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE-EEEEecc
Confidence 4788999998732 223332111000111238999999762 3479999922224454 455555443 333322
Q ss_pred --CCcCCccCCCCcEEEEccCCcEEEEeC-----------------CCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCC
Q psy5768 81 --KKYPAVTACNLHIAVDWIAQNIYWSDP-----------------KENVIEVARLTGQYRYVLISGGVDQPSALAVDPE 141 (652)
Q Consensus 81 --~~~~~p~~~~~~lavDw~~~~lY~~d~-----------------~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~ 141 (652)
..+..|+ ++++|. .+.+|+++. ..+.+.+++.+ + .+++. .++..|.+||++|.
T Consensus 160 ~g~~~~~pN----D~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-~-~~~~~-~~l~~pNGia~spD 231 (355)
T 3sre_A 160 RHKLLPSVN----DIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-D-VRVVA-EGFDFANGINISPD 231 (355)
T ss_dssp CCTTCSSEE----EEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-C-CEEEE-EEESSEEEEEECTT
T ss_pred ccCCCCCCc----eEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-e-EEEee-cCCcccCcceECCC
Confidence 2367789 999996 677777754 24678888773 3 44444 45899999999998
Q ss_pred CCeEEEEecCCCCeEEEEeCCCCCcE---EEEeecccCceeEEEeccCCEEEEEe-CCC
Q psy5768 142 SGYLFWSESGKIPLIARAGLDGKKQT---ILAQEIIMPIKDITLDLKFFSAFYRN-LSK 196 (652)
Q Consensus 142 ~g~lywtd~~~~~~I~~~~ldg~~~~---~~~~~~~~~p~gl~lD~~~~~ly~~d-~~g 196 (652)
..+||++|.. ..+|++..+++.... ..+. --..|.|+++|..++.||+.. .+|
T Consensus 232 g~~lYvadt~-~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 232 GKYVYIAELL-AHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp SSEEEEEEGG-GTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCH
T ss_pred CCEEEEEeCC-CCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCc
Confidence 8899999986 568999998743221 1222 246899999998667887744 443
No 139
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.53 E-value=4e-05 Score=75.61 Aligned_cols=186 Identities=13% Similarity=0.068 Sum_probs=125.0
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCc-ceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEE
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-HRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIV 394 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~-~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~ 394 (652)
..|+.|+ .++||.+....++|.++++.... ...++..-.-.+||+++ ++.||.+....+.+.+++.... +.
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl----~~ 128 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPP----QR 128 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTT----EE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcC----cE
Confidence 3688888 58999999988889999876433 33333222233667775 7899999999999999998653 33
Q ss_pred EEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE--c---CCCCCceEEEecCCCEEEEEeCCCC
Q psy5768 395 VVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT--T---DITMPNALALDHQAEKLFWGDARLD 469 (652)
Q Consensus 395 ~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~--~---~l~~P~glaiD~~~~~LYw~D~~~~ 469 (652)
+-.......+.+++-| .+.||.+| ++ .+|...+........-+. . .+..+|.|... +++||......+
T Consensus 129 ~~ti~~~~eGwGLt~D--g~~L~vSd-Gs--~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~ 201 (268)
T 3nok_A 129 ERTTRYSGEGWGLCYW--NGKLVRSD-GG--TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSS 201 (268)
T ss_dssp EEEEECSSCCCCEEEE--TTEEEEEC-SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCS
T ss_pred EEEEeCCCceeEEecC--CCEEEEEC-CC--CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCC
Confidence 3333333455666655 68999998 43 377766554433222121 1 13455666655 789999888899
Q ss_pred eEEEEecCCCceEEEecCC-------------CCceeEEEEe--CCEEEEEcCCCCeEEEEE
Q psy5768 470 KIERCDYDGTNRIVLSKIS-------------PLHPFDMAVY--GEFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 470 ~I~~~~ldG~~~~~l~~~~-------------~~~p~glav~--~~~lYwtd~~~~~I~~~~ 516 (652)
.|.++|.........+... ..-|.|||+. +++||+|.-.=..++++.
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 9999998654433332211 2368999998 579999987777887764
No 140
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.53 E-value=1e-05 Score=79.14 Aligned_cols=160 Identities=16% Similarity=0.200 Sum_probs=107.8
Q ss_pred ceeeeEEEccCCEEEEEeCCC--CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 357 SVEGLAYEYVHNYLYWTCNND--ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 357 ~~~glAvDw~~~~LYwtd~~~--~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
-..||++|. +.||.+.... .+|.++++...+ .+....-...+.+..+.+..+.||..+|..+ ++...+.+
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgk----v~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~--~v~v~D~~ 93 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGR----ILQRAEVPPPYFGAGIVAWRDRLIQLTWRNH--EGFVYDLA 93 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCC----EEEEEECCTTCCEEEEEEETTEEEEEESSSS--EEEEEETT
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCC----EEEEEeCCCCcceeEEEEeCCEEEEEEeeCC--EEEEEECC
Confidence 567999985 8999998764 589999986532 2222222345554444444689999999864 77777664
Q ss_pred CCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCce-EEEecCC----CCceeEEEEeCCEEEEEcCCC
Q psy5768 435 GFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNR-IVLSKIS----PLHPFDMAVYGEFIFWTDWVI 509 (652)
Q Consensus 435 G~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~-~~l~~~~----~~~p~glav~~~~lYwtd~~~ 509 (652)
.-....-+... +.|..|..++++||.+|. .++|..+|...... ..+.... +..+-.|...++.||...|.+
T Consensus 94 tl~~~~ti~~~---~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s 169 (243)
T 3mbr_X 94 TLTPRARFRYP---GEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT 169 (243)
T ss_dssp TTEEEEEEECS---SCCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTT
T ss_pred cCcEEEEEeCC---CCceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCC
Confidence 33222222222 234444455899999995 88999998876433 2222111 234456777799999999999
Q ss_pred CeEEEEEccCCceEEEEec
Q psy5768 510 HAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 510 ~~I~~~~k~~g~~~~~~~~ 528 (652)
+.|.++|..+|+....+..
T Consensus 170 ~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp TEEEEECTTTCBEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEEC
Confidence 9999999999998887764
No 141
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.53 E-value=5.9e-06 Score=90.71 Aligned_cols=190 Identities=17% Similarity=0.156 Sum_probs=134.5
Q ss_pred CCeEEEeecccccEEEEeccCCcceEEe--eccCceeeeEE-E-ccCCEEEEEe-----------------CCCCeEEEE
Q psy5768 325 RKTLFYSDIQKGTINSVFFNGSNHRVLL--ERQGSVEGLAY-E-YVHNYLYWTC-----------------NNDATINKI 383 (652)
Q Consensus 325 ~~~lywsd~~~~~I~~~~~~g~~~~~i~--~~~~~~~glAv-D-w~~~~LYwtd-----------------~~~~~I~~~ 383 (652)
.++||+.|..+++|.+++++.-....++ .....|+|+++ . +.++.||.+. ...+.+.++
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 4689999999999999999875544444 34468999998 4 7899999985 334578899
Q ss_pred EcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCC------------ceE---------------------E
Q psy5768 384 DLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLP------------SIQ---------------------R 430 (652)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~------------~I~---------------------r 430 (652)
+.+.. +.+.......+|.+++++|..+++|+|...++.. .|. .
T Consensus 181 D~~t~----~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 181 DADKW----EVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp ETTTT----EEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred ECCCC----eEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 98753 3333333334899999999999999998765321 000 1
Q ss_pred EeecCCC--ceE---EEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCc---------e-EEEecC-CCCceeE
Q psy5768 431 AFFSGFG--TES---IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN---------R-IVLSKI-SPLHPFD 494 (652)
Q Consensus 431 ~~ldG~~--~~~---l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~---------~-~~l~~~-~~~~p~g 494 (652)
.-+|+.. ..+ .+... ..|.|+.+.++++++|.++...+.|..++++... + .++... ....|.+
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 1123332 111 12211 4799999999999999999999999999998431 0 111111 1368999
Q ss_pred EEEeC-CEEEEEcCCCCeEEEEEccC
Q psy5768 495 MAVYG-EFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 495 lav~~-~~lYwtd~~~~~I~~~~k~~ 519 (652)
+++.. +++|.+.+..+.|...+..+
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhH
Confidence 99983 59999999999998887654
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.52 E-value=1.9e-05 Score=81.06 Aligned_cols=225 Identities=10% Similarity=0.047 Sum_probs=139.4
Q ss_pred eecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeec-------cCc
Q psy5768 285 RVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER-------QGS 357 (652)
Q Consensus 285 ~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~-------~~~ 357 (652)
....|..+++..+ . ....+.... ...+.++++++..+.+|.+....+.|+.+++.+......+.. ...
T Consensus 19 ~~~~v~~~d~~~~-~---~~~~~~~~~-~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~ 93 (349)
T 1jmx_B 19 YPNNLHVVDVASD-T---VYKSCVMPD-KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS 93 (349)
T ss_dssp TTTEEEEEETTTT-E---EEEEEECSS-CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred CCCeEEEEECCCC-c---EEEEEecCC-CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc
Confidence 3456777776222 1 112232211 113567888888888999998888999999875433322221 224
Q ss_pred eeeeEEEccCCEEEEEeCC-----------CCeEEEEEcCCCCCc-cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCC
Q psy5768 358 VEGLAYEYVHNYLYWTCNN-----------DATINKIDLDSPKAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHL 425 (652)
Q Consensus 358 ~~glAvDw~~~~LYwtd~~-----------~~~I~~~~~~~~~~~-~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~ 425 (652)
|.++++++.++.||.+... .+.|.++++...... ..... .....+.+++++|... ||.++.
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~-l~~~~~---- 166 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVYLMRAADDGS-LYVAGP---- 166 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSCCCEEECTTSC-EEEESS----
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCcccceeECCCCc-EEEccC----
Confidence 8999999999999999854 578999998642111 11122 2234688899999655 877532
Q ss_pred CceEEEeecCCCceEEEEcC------------------------------------------------------------
Q psy5768 426 PSIQRAFFSGFGTESIITTD------------------------------------------------------------ 445 (652)
Q Consensus 426 ~~I~r~~ldG~~~~~l~~~~------------------------------------------------------------ 445 (652)
.|...++........+...
T Consensus 167 -~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
T 1jmx_B 167 -DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT 245 (349)
T ss_dssp -SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE
T ss_pred -cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcE
Confidence 2444433222111111000
Q ss_pred --------CCCCceEEEec-CCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEE
Q psy5768 446 --------ITMPNALALDH-QAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLR 514 (652)
Q Consensus 446 --------l~~P~glaiD~-~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~ 514 (652)
-..|.++++++ .+++||.+ .+.|..+++........+... ..|.++++. +++||.+. ..+.|..
T Consensus 246 ~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~-~~~~v~v 320 (349)
T 1jmx_B 246 HTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGG-TFNDLAV 320 (349)
T ss_dssp EEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEES-BSSEEEE
T ss_pred EecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEec-CCCeEEE
Confidence 11456777778 88899988 568999999765543333322 568888886 45888864 4588888
Q ss_pred EEccCCceEEEEe
Q psy5768 515 ANKYTGEEVYTLR 527 (652)
Q Consensus 515 ~~k~~g~~~~~~~ 527 (652)
.+..+++.+..+.
T Consensus 321 ~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 321 FNPDTLEKVKNIK 333 (349)
T ss_dssp EETTTTEEEEEEE
T ss_pred Eeccccceeeeee
Confidence 8887777666554
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.49 E-value=0.00034 Score=80.18 Aligned_cols=363 Identities=10% Similarity=0.084 Sum_probs=210.5
Q ss_pred CCCeeEEEEECCCCEEEEEeccCCcc-----eEEEEEcCCCccEEEEeCCCcC------------------------Ccc
Q psy5768 37 LSKISSIAVWPVKGKMFWSNVTKQVV-----TIEMAFMDGTKRETVVSQKKYP------------------------AVT 87 (652)
Q Consensus 37 ~~~~~~v~~d~~~~~lyw~d~~~~~~-----~I~~~~~dgs~~~~v~~~~~~~------------------------~p~ 87 (652)
...+.+++++|.+.+|+++. ...+ .|+.+++++.....+.... .. .+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~--~~d~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLR--GKDSDRNQLDLWSYDIGSGQTRLLVDSK-VVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEE--CCSSCTTEEEEEEEETTTCCEEEEECGG-GTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEe--ccCCCCcccEEEEEECCCCceeEccchh-hcccccccccchhhhhhhhhhhccccCcc
Confidence 35688999999999999987 4233 8999999876555554432 11 145
Q ss_pred CCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCC---cEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCC
Q psy5768 88 ACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQ---YRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 164 (652)
Q Consensus 88 ~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~---~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~ 164 (652)
++++...++.|+++.. +.|.+.++++. ..+.+... -..+..+++.|...+|.++.. ..|...++++.
T Consensus 113 ----~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~-~~~~~~~~~SPDG~~la~~~~---~~i~~~d~~~g 182 (741)
T 2ecf_A 113 ----DYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG-EGFATDAKLSPKGGFVSFIRG---RNLWVIDLASG 182 (741)
T ss_dssp ----CCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS-SSCEEEEEECTTSSEEEEEET---TEEEEEETTTT
T ss_pred ----eeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC-CcccccccCCCCCCEEEEEeC---CcEEEEecCCC
Confidence 8889888888888875 89999998876 44443332 356789999997777887753 37888888775
Q ss_pred CcEEEEeec----------------ccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeee
Q psy5768 165 KQTILAQEI----------------IMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKI 228 (652)
Q Consensus 165 ~~~~~~~~~----------------~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (652)
....+.... +..+.++++.+.+++|++...+++....... .. .. |..-.+
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~------~~--~~------p~~~~~ 248 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKR------YE--VY------ADRTDV 248 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEE------EE--EC------SSCEEE
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEec------CC--CC------CCcccc
Confidence 544433221 1124778999888888887666443322110 00 00 000000
Q ss_pred eeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeee
Q psy5768 229 YSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIR 308 (652)
Q Consensus 229 ~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~ 308 (652)
.... | ...|. .. ....|+.+++...... ..+.
T Consensus 249 ~~~~---------------------------------~-~~~g~---~~-------~~~~l~~~d~~~~~~~----~~~~ 280 (741)
T 2ecf_A 249 IEQR---------------------------------Y-PAAGD---AN-------VQVKLGVISPAEQAQT----QWID 280 (741)
T ss_dssp EEEE---------------------------------C-CBTTS---CC-------CEEEEEEECSSTTCCC----EEEC
T ss_pred eEee---------------------------------c-CCCCC---CC-------CeeEEEEEECCCCCce----EEec
Confidence 0000 0 00000 00 0112233333110110 1111
Q ss_pred ec-cccceEEEEEEEcCCCeEEEeec----ccccEEEEeccCCcceEEeeccC-----ceeeeEEEccCCEEEEEeCCCC
Q psy5768 309 NS-TMMKNIIELSYDYKRKTLFYSDI----QKGTINSVFFNGSNHRVLLERQG-----SVEGLAYEYVHNYLYWTCNNDA 378 (652)
Q Consensus 309 ~~-~~~~~~~~v~~D~~~~~lywsd~----~~~~I~~~~~~g~~~~~i~~~~~-----~~~glAvDw~~~~LYwtd~~~~ 378 (652)
.. .....+..+++ +..+.|+++.. ....|+.+++.+.....+..... ...++++.+.++ ++++....+
T Consensus 281 ~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g 358 (741)
T 2ecf_A 281 LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG 358 (741)
T ss_dssp CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS
T ss_pred CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC
Confidence 00 11234567788 87788887643 24568888877655554442211 345789988887 556554444
Q ss_pred --eEEEEEcCCCCCccEEEEEeCC-CCCceEE-EEeCCCCEEEEEecCCC--CCceEEEeecCCCceEEEEcCCCCCceE
Q psy5768 379 --TINKIDLDSPKAQRIVVVRLGQ-HDKPRGI-DIDSCDSRIYWTNWNSH--LPSIQRAFFSGFGTESIITTDITMPNAL 452 (652)
Q Consensus 379 --~I~~~~~~~~~~~~~~~~~~~~-~~~P~~I-avdp~~g~Lywtd~~~~--~~~I~r~~ldG~~~~~l~~~~l~~P~gl 452 (652)
.|+.+++++ . ...+.. ......+ +++|..+.||++..... ..+|++..++|...+.|.. ......+
T Consensus 359 ~~~l~~~~~~~----~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~ 430 (741)
T 2ecf_A 359 FQHLYRIDSKG----K--AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK--APGMHSA 430 (741)
T ss_dssp SCEEEEECSSS----C--EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC--SCSEEEE
T ss_pred ccEEEEEcCCC----C--eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc--CCCceEE
Confidence 677776554 2 222222 2334466 59998888988765432 3468888888876655543 2334578
Q ss_pred EEecCCCEEEEEeCCC---CeEEEEecCCCceEEE
Q psy5768 453 ALDHQAEKLFWGDARL---DKIERCDYDGTNRIVL 484 (652)
Q Consensus 453 aiD~~~~~LYw~D~~~---~~I~~~~ldG~~~~~l 484 (652)
++.+++++|.+.-... ..++..+.+|...+.+
T Consensus 431 ~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 431 SFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred EECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
Confidence 8888888888764332 3577788877654444
No 144
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.48 E-value=6.6e-06 Score=90.28 Aligned_cols=301 Identities=11% Similarity=0.050 Sum_probs=180.7
Q ss_pred CCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEE-E-ccCCcEEEEe-----------------CC
Q psy5768 48 VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAV-D-WIAQNIYWSD-----------------PK 108 (652)
Q Consensus 48 ~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lav-D-w~~~~lY~~d-----------------~~ 108 (652)
...++|++| ..+.+|.|++++--....++.-..-..|. |+++ . +-++.+|.+. ..
T Consensus 100 DG~~lfVnd--~~~~rVavIdl~t~~~~~ii~ip~g~~ph----g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 100 DGRFLFMND--KANTRVARVRCDVMKCDAILEIPNAKGIH----GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEE--TTTTEEEEEETTTTEEEEEEECSSCCSEE----EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCEEEEEc--CCCCEEEEEECCCceEeeEEeCCCCCCCc----ceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 578999999 88999999999875433333322124577 9998 4 6789999984 23
Q ss_pred CCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCE
Q psy5768 109 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFS 188 (652)
Q Consensus 109 ~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ 188 (652)
.+.+.+.|.+......-+.-+ ..|..++++|..+++|+|...+.-......+....+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d--------------------- 231 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD--------------------- 231 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEE---------------------
T ss_pred CceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccc---------------------
Confidence 457888888854322222212 2799999999999999998653210000000000000
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccc
Q psy5768 189 AFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVA 268 (652)
Q Consensus 189 ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~ 268 (652)
.+.|+...+... ..
T Consensus 232 ------------------------------------~v~V~~~~~~~~------------------------------~v 245 (595)
T 1fwx_A 232 ------------------------------------HIVVFNIAEIEK------------------------------AI 245 (595)
T ss_dssp ------------------------------------EEEEEEHHHHHH------------------------------HH
T ss_pred ------------------------------------eEEEeeccceeE------------------------------ec
Confidence 111111111000 00
Q ss_pred cCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCc-
Q psy5768 269 QDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN- 347 (652)
Q Consensus 269 ~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~- 347 (652)
.+|+ ++.+ +.+..|+...... ...+..+..+ .++.++++.+..+++|.++...++|..+++....
T Consensus 246 ~~Gk-------~~~i---~~V~VID~~~~~~-~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~ 311 (595)
T 1fwx_A 246 AAGD-------YQEL---NGVKVVDGRKEAS-SLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDA 311 (595)
T ss_dssp HHTC-------SEEE---TTEEEEECSGGGC-CSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHH
T ss_pred cCCC-------eeEE---CcEEEEeCcccCC-ceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECccccc
Confidence 0110 0111 2344444421000 1001223222 4578899999999999999999999999977321
Q ss_pred ---------ceEEe--eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCC----CC--ccEEEEEeCCCCCc------
Q psy5768 348 ---------HRVLL--ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSP----KA--QRIVVVRLGQHDKP------ 404 (652)
Q Consensus 348 ---------~~~i~--~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~----~~--~~~~~~~~~~~~~P------ 404 (652)
..++. +.-.+|.++|+|..+ ++|.+....++|.+.+++.. .+ ....+-.+....+|
T Consensus 312 ~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~ 390 (595)
T 1fwx_A 312 VFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTV 390 (595)
T ss_dssp HHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEET
T ss_pred ccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceec
Confidence 01222 222389999999988 99999999999999998651 00 02344444445666
Q ss_pred eEEEEeCCCCEEEEEecCCCCCce-----------EEEeecCCCceEEEEc-CCCCCceEEEecCC
Q psy5768 405 RGIDIDSCDSRIYWTNWNSHLPSI-----------QRAFFSGFGTESIITT-DITMPNALALDHQA 458 (652)
Q Consensus 405 ~~Iavdp~~g~Lywtd~~~~~~~I-----------~r~~ldG~~~~~l~~~-~l~~P~glaiD~~~ 458 (652)
.++++.|...+||.++..+.. ++ ....+.|...+.+... ....|.-.+|++.+
T Consensus 391 ~g~t~~~DGk~l~~~Nk~skd-r~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~ 455 (595)
T 1fwx_A 391 MGETLDATNDWLVCLSKFSKD-RFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPS 455 (595)
T ss_dssp TTTSTTCCSSEEEEEESCCTT-SSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTT
T ss_pred cceEeCCCCCEEEEcCCCCcc-ccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHH
Confidence 567889999999999987632 44 4556666554444322 36789999998654
No 145
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.48 E-value=5e-08 Score=73.14 Aligned_cols=38 Identities=37% Similarity=0.767 Sum_probs=34.6
Q ss_pred CCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 551 C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
|..+||+|+|+|+..+.|+|+|+|+.||.|..| ++|.+
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 777899999999998866799999999999999 89986
No 146
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.47 E-value=4.1e-08 Score=71.97 Aligned_cols=38 Identities=26% Similarity=0.634 Sum_probs=34.4
Q ss_pred CCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 551 C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
|..+||+|+|+|+.+++++|+|+|+.||.|..| ++|.+
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 777899999999998876799999999999999 89986
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.46 E-value=5.7e-05 Score=77.38 Aligned_cols=149 Identities=11% Similarity=-0.005 Sum_probs=97.5
Q ss_pred CCeEEEeecccccEEEEeccCCcceEEeeccC--ceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCC--
Q psy5768 325 RKTLFYSDIQKGTINSVFFNGSNHRVLLERQG--SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQ-- 400 (652)
Q Consensus 325 ~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~--~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~-- 400 (652)
.+++|++....+.|+.+++........+..-. .|.++++++.++.||.+....+.|.++++.... ....+....
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--~~~~~~~~~~~ 87 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--NTFHANLSSVP 87 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEESCCST
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--EEEEEEccccc
Confidence 45677777777788888776433322222222 689999999999999999888999999986421 122222221
Q ss_pred ---CCCceEEEEeCCCCEEEEEecC---------CCCCceEEEeecCCC---ceEEEEcCCCCCceEEEecCCCEEEEEe
Q psy5768 401 ---HDKPRGIDIDSCDSRIYWTNWN---------SHLPSIQRAFFSGFG---TESIITTDITMPNALALDHQAEKLFWGD 465 (652)
Q Consensus 401 ---~~~P~~Iavdp~~g~Lywtd~~---------~~~~~I~r~~ldG~~---~~~l~~~~l~~P~glaiD~~~~~LYw~D 465 (652)
...|.+++++|...+||++... .....|...++.... ...... .-..+.++++++.++ ||.++
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~ 165 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG 165 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES
T ss_pred ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc
Confidence 2348999999998899998743 112378877776421 112222 223578899998877 88864
Q ss_pred CCCCeEEEEecCCCc
Q psy5768 466 ARLDKIERCDYDGTN 480 (652)
Q Consensus 466 ~~~~~I~~~~ldG~~ 480 (652)
. .|..+++....
T Consensus 166 ~---~i~~~d~~~~~ 177 (349)
T 1jmx_B 166 P---DIYKMDVKTGK 177 (349)
T ss_dssp S---SEEEECTTTCC
T ss_pred C---cEEEEeCCCCc
Confidence 3 38888886544
No 148
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.42 E-value=4.6e-05 Score=80.89 Aligned_cols=202 Identities=14% Similarity=0.126 Sum_probs=128.6
Q ss_pred cceEEEEEEEcCCCeEEEeeccc------ccEEEEeccCCcceEEeeccCceeeeE----EEccCCEEEEEe--------
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQK------GTINSVFFNGSNHRVLLERQGSVEGLA----YEYVHNYLYWTC-------- 374 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~------~~I~~~~~~g~~~~~i~~~~~~~~glA----vDw~~~~LYwtd-------- 374 (652)
...+..+..-+.. ||++...+ +.|..++..+.....-.+.-..|.+++ +.+.++.+|-++
T Consensus 137 ~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred CCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence 3456667666554 99987655 678887766433222222222444444 455677777776
Q ss_pred ----------CCCCeEEEEEcCCCCCccEEEEEeC-CCCCceEEEE--eCCCCEEEEEec-----CCCCCceEEEeecCC
Q psy5768 375 ----------NNDATINKIDLDSPKAQRIVVVRLG-QHDKPRGIDI--DSCDSRIYWTNW-----NSHLPSIQRAFFSGF 436 (652)
Q Consensus 375 ----------~~~~~I~~~~~~~~~~~~~~~~~~~-~~~~P~~Iav--dp~~g~Lywtd~-----~~~~~~I~r~~ldG~ 436 (652)
...++|.+.+++..+ ....+.++ ....|+.|++ +|...++|++.. .+ ..|.....++.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls--s~V~v~~~d~g 290 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS--SSIWLWFYEDG 290 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC--EEEEEEEEETT
T ss_pred cccchhhhhhccCCEEEEEECCCCc--EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC--ceEEEEEecCC
Confidence 236899999987521 22223332 2357888877 999999999986 43 37777666652
Q ss_pred Cce--EEE--Ec-----C-----------CCCCceEEEecCCCEEEEEeCCCCeEEEEecC-CCceEEEecCCC------
Q psy5768 437 GTE--SII--TT-----D-----------ITMPNALALDHQAEKLFWGDARLDKIERCDYD-GTNRIVLSKISP------ 489 (652)
Q Consensus 437 ~~~--~l~--~~-----~-----------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld-G~~~~~l~~~~~------ 489 (652)
.-+ ..+ .. . -..|.+|.|..+++.||+++.+.+.|..++++ ....+.+.....
T Consensus 291 ~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~ 370 (462)
T 2ece_A 291 KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHR 370 (462)
T ss_dssp EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTC
T ss_pred ceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecc
Confidence 211 111 11 0 14588999999999999999999999999985 333443322111
Q ss_pred ----------CceeEEEEe--CCEEEEEc--------C-----CCCeEEEE--EccCC
Q psy5768 490 ----------LHPFDMAVY--GEFIFWTD--------W-----VIHAVLRA--NKYTG 520 (652)
Q Consensus 490 ----------~~p~glav~--~~~lYwtd--------~-----~~~~I~~~--~k~~g 520 (652)
..|.++++. +.+||+++ . .+..++++ |..+|
T Consensus 371 ~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G 428 (462)
T 2ece_A 371 ADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG 428 (462)
T ss_dssp BCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC
T ss_pred ccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC
Confidence 159999986 67999999 3 34567655 55566
No 149
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=98.40 E-value=2.1e-07 Score=74.88 Aligned_cols=48 Identities=33% Similarity=0.677 Sum_probs=39.3
Q ss_pred eccCceeeccC--CcccCcccccCC-CceeeccCeecCCccCCCCCCCCCCCCCCCC
Q psy5768 573 SCFTGKVLMED--NRSCTINTVCSE-HDFKCSDGMCIPFNQTCDRVYNCHDKSDEGI 626 (652)
Q Consensus 573 ~Cp~g~~l~~d--~~C~~~~~~C~~-~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~ 626 (652)
-|++| +| ..|.. ..|.+ .+|+|.+|+||+..|+|||+.||.|||||..
T Consensus 29 DC~Dg----sDE~~~C~~--~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE~~ 79 (82)
T 2fyj_A 29 DCGDR----SDESASCAY--PTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAG 79 (82)
T ss_dssp SSCST----TTTTSSCCC--SSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSCSC
T ss_pred cCCCc----ccccccccc--ccCCCCCceECCCCCeEcHHHccCCCCcCCCCccccC
Confidence 46766 34 34642 46865 8999999999999999999999999999976
No 150
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.39 E-value=8e-08 Score=72.03 Aligned_cols=39 Identities=33% Similarity=0.858 Sum_probs=34.2
Q ss_pred CCCCCCCCcccceecC-CCceEEEeCCc-cccCCCcccccc
Q psy5768 240 CGVNNGGCAELCLYNG-VSAVCACAHGV-VAQDGKSCSEYD 278 (652)
Q Consensus 240 C~~~ng~Cs~lC~~~~-~~~~C~C~~G~-l~~dg~~C~~~~ 278 (652)
|..+||+|+|+|+..+ ++|.|.|+.|| |.+|+++|.+..
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 7778999999999887 58999999998 678999998643
No 151
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.38 E-value=1.5e-07 Score=103.39 Aligned_cols=71 Identities=25% Similarity=0.451 Sum_probs=52.6
Q ss_pred CceeeeccCceeecc-C-CcccCcccccCCCceeec-cCeecCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCC
Q psy5768 568 GQVVCSCFTGKVLME-D-NRSCTINTVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNN 644 (652)
Q Consensus 568 ~~~~C~Cp~g~~l~~-d-~~C~~~~~~C~~~~f~C~-~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~~C~~~~f~C~~~ 644 (652)
|...|.++....-.- . +.|. .+..| .+|+|. ||+||+..|+|||++||.|+|||.. | ...++.|..+
T Consensus 42 gG~~C~~~l~d~~~C~~~~~C~-~~~~c--~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~--c-----~~~~~~C~~~ 111 (537)
T 3ojy_B 42 HGEPCNFSDKEVEDCVTNRPCR-SQVRC--EGFVCAQTGRCVNRRLLCNGDNDCGDQSDEAN--C-----RRIYKKCQHE 111 (537)
T ss_dssp TCCCCCSCSEEEEECCCCCCCC-CCSCC--SSEECTTTCCEECGGGTTSSSCCSSSSCTTSS--C-----SSCSSCCSSC
T ss_pred CCCcCccchhhhccCCCccccc-cCCCC--CccCcCCCCcEeeccccCCCCCCCCCcccccc--C-----CCCCCccccC
Confidence 356677764433221 1 4452 24557 799999 8999999999999999999999976 6 4445789888
Q ss_pred Cccc
Q psy5768 645 KCIL 648 (652)
Q Consensus 645 ~Ci~ 648 (652)
+|||
T Consensus 112 ~~~~ 115 (537)
T 3ojy_B 112 MDQY 115 (537)
T ss_dssp CBCC
T ss_pred cCCC
Confidence 9988
No 152
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.38 E-value=7.1e-08 Score=70.68 Aligned_cols=41 Identities=32% Similarity=0.744 Sum_probs=35.4
Q ss_pred CCCCCCCCcccceecCC-CceEEEeCCc-cccCCCcccccceE
Q psy5768 240 CGVNNGGCAELCLYNGV-SAVCACAHGV-VAQDGKSCSEYDAF 280 (652)
Q Consensus 240 C~~~ng~Cs~lC~~~~~-~~~C~C~~G~-l~~dg~~C~~~~~~ 280 (652)
|..+||+|+|+|+..++ +|+|.|+.|| |..|+++|.+.++|
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 77789999999998887 6999999998 67899999865543
No 153
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.36 E-value=1.7e-07 Score=104.20 Aligned_cols=53 Identities=34% Similarity=0.729 Sum_probs=46.4
Q ss_pred CCceeeccCeecCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCcccCCC
Q psy5768 595 EHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 595 ~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~~C~~~~f~C~~~~Ci~~~~ 651 (652)
..+|+|.+|.||+..|+|||+.||.|+|||.. |.. |++++|+|.++.||+..+
T Consensus 206 ~~~~~C~~~~ci~~~~~Cdg~~dC~d~sDE~~--C~~--c~~~~~~C~~~~C~~~~~ 258 (565)
T 2xrc_A 206 DDFFQCVNGKYISQMKACDGINDCGDQSDELC--CKA--CQGKGFHCKSGVCIPSQY 258 (565)
T ss_dssp ---CBCTTSCBCCTTSTTSSSCCSSSSSSSSS--BSS--CSSSCEEETTTEEECGGG
T ss_pred cCeeECCCCCccCHHHcCCCcccCCCCccccc--ccc--cCCCceecCCCcccCccc
Confidence 45699999999999999999999999999987 854 999999999999998653
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.36 E-value=0.0046 Score=73.96 Aligned_cols=197 Identities=9% Similarity=0.051 Sum_probs=119.8
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCC---------CeEEEE
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNND---------ATINKI 383 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~---------~~I~~~ 383 (652)
..+..+++.+..+.|+++.. .+.|+..++.+.....+. .....+.++++.+.++.|.++.... ..|.+.
T Consensus 379 ~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 45678889998888887765 368888888765555555 3344568899999999998876532 478888
Q ss_pred EcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCC---------------CceEEEee---------------
Q psy5768 384 DLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHL---------------PSIQRAFF--------------- 433 (652)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~---------------~~I~r~~l--------------- 433 (652)
++.+. +..........+..++..|...+|||+...... .+++...+
T Consensus 458 d~~~g----~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (1045)
T 1k32_A 458 DMEGR----KIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 533 (1045)
T ss_dssp ETTTT----EEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGG
T ss_pred ECCCC----cEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcc
Confidence 87652 222222334567889999988889987642110 01122211
Q ss_pred ---------cCCCceEEE-EcCCCCCceEEEecCCCEEEE------------EeCCCCeEEEEecCCCceEEEecCCCCc
Q psy5768 434 ---------SGFGTESII-TTDITMPNALALDHQAEKLFW------------GDARLDKIERCDYDGTNRIVLSKISPLH 491 (652)
Q Consensus 434 ---------dG~~~~~l~-~~~l~~P~glaiD~~~~~LYw------------~D~~~~~I~~~~ldG~~~~~l~~~~~~~ 491 (652)
+|...+... ...-....++++.+++..+|. .......|+.+|+.+...+.+. ..
T Consensus 534 ~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~----~~ 609 (1045)
T 1k32_A 534 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK----NN 609 (1045)
T ss_dssp SCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE----EE
T ss_pred ccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee----cC
Confidence 221111110 001123356888766544443 1234558999999887776665 33
Q ss_pred eeEEEEe--CCEEEEEcCCCCeEEEEEccCCc
Q psy5768 492 PFDMAVY--GEFIFWTDWVIHAVLRANKYTGE 521 (652)
Q Consensus 492 p~glav~--~~~lYwtd~~~~~I~~~~k~~g~ 521 (652)
+.++++. +.+|+++... .|..++..+++
T Consensus 610 v~~~~~S~DG~~l~~~~~~--~i~~~d~~~~~ 639 (1045)
T 1k32_A 610 LTDLRLSADRKTVMVRKDD--GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEEECTTSCEEEEEETT--SCEEEEESSCT
T ss_pred cceEEECCCCCEEEEEcCC--cEEEEeCccCc
Confidence 4566664 5689888755 46666665555
No 155
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.35 E-value=8.4e-08 Score=69.71 Aligned_cols=40 Identities=38% Similarity=0.951 Sum_probs=34.9
Q ss_pred CCCCCCCCcccceecCCCceEEEeCCc-cccCCCcccccce
Q psy5768 240 CGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYDA 279 (652)
Q Consensus 240 C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~~~ 279 (652)
|..+|++|+|+|++.+++|+|.|+.|| |..|+++|.+.++
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide 41 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTER 41 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSS
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCc
Confidence 667799999999998889999999998 6789999986544
No 156
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.34 E-value=1.1e-07 Score=70.33 Aligned_cols=42 Identities=36% Similarity=0.862 Sum_probs=37.0
Q ss_pred CCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCcccccce
Q psy5768 238 NPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYDA 279 (652)
Q Consensus 238 n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~~~ 279 (652)
++|...|++|+|+|++.+++|+|.|+.|| |..|+++|.+..+
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcc
Confidence 78998899999999999889999999998 6789999985443
No 157
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.33 E-value=0.0003 Score=75.00 Aligned_cols=226 Identities=10% Similarity=0.058 Sum_probs=150.2
Q ss_pred cceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeeccc--ccEEEEeccCCcceEEeeccCceeeeEEE
Q psy5768 287 NRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQK--GTINSVFFNGSNHRVLLERQGSVEGLAYE 364 (652)
Q Consensus 287 ~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~--~~I~~~~~~g~~~~~i~~~~~~~~glAvD 364 (652)
..|+..++ ++... ..+.. +...+.++++.+..++|+++.... ..|+..++.+.....+......+..+++.
T Consensus 159 ~~i~i~d~-~g~~~----~~l~~--~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 159 YELRVSDY-DGYNQ----FVVHR--SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFS 231 (415)
T ss_dssp EEEEEEET-TSCSC----EEEEE--ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEEC
T ss_pred ceEEEEcC-CCCCC----EEEeC--CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEc
Confidence 46777777 44221 23322 124577899999999999887543 57888898765555554444567889999
Q ss_pred ccCCEEEEEeCC--CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE
Q psy5768 365 YVHNYLYWTCNN--DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII 442 (652)
Q Consensus 365 w~~~~LYwtd~~--~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~ 442 (652)
+.++.|+++... ...|++.++.+.. ...+ .........++..|...+|+++......++|+..++++...+.+.
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~---~~~l-~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQ---IRQV-TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCC---EEEC-CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCC---EEeC-cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe
Confidence 999999987654 3458888886532 2222 123356788999998888888764333458999888876654433
Q ss_pred EcCCCCCceEEEecCCCEEEEEeCC--CCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCC--eEEEEE
Q psy5768 443 TTDITMPNALALDHQAEKLFWGDAR--LDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIH--AVLRAN 516 (652)
Q Consensus 443 ~~~l~~P~glaiD~~~~~LYw~D~~--~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~--~I~~~~ 516 (652)
. .-.....+++.+++++|+++... ...|..+++++...+.+... ....++++. +.+|+++....+ .|+.++
T Consensus 308 ~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 308 W-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp C-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred c-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC--CCcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 2 22345678999999999988654 45899999998776554432 356777775 457777654444 788888
Q ss_pred ccCCceEEEEe
Q psy5768 517 KYTGEEVYTLR 527 (652)
Q Consensus 517 k~~g~~~~~~~ 527 (652)
.. |...+.+.
T Consensus 385 ~~-g~~~~~l~ 394 (415)
T 2hqs_A 385 TD-GRFKARLP 394 (415)
T ss_dssp TT-SCCEEECC
T ss_pred CC-CCcEEEee
Confidence 75 44444443
No 158
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.28 E-value=0.00017 Score=74.17 Aligned_cols=163 Identities=18% Similarity=0.202 Sum_probs=107.7
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCC-------EEEEEeccCC--cceEEEEEcCCC--
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKG-------KMFWSNVTKQ--VVTIEMAFMDGT-- 72 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-------~lyw~d~~~~--~~~I~~~~~dgs-- 72 (652)
+++.-..+.++++|++|+.+..+.. .++.+|++-|.-. .+|.++ .. .++|..+.+|..
T Consensus 43 ii~t~k~~gL~Vydl~G~~l~~~~~---------g~~nnVD~r~~~~l~g~~~dla~as~--R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 43 LITTNKKSGLVVYSLDGKMLHSYNT---------GKLNNVDIRYDFPLNGKKVDIAAASN--RSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp EEEEETTTEEEEEETTSCEEEEECC---------SCEEEEEEEEEEEETTEEEEEEEEEE--CSTTCCEEEEEEECTTTC
T ss_pred EEEEcCCCCEEEEcCCCcEEEEccC---------CCcccEEEecccccCCceEeEEEEeC--CCCCCCeEEEEEECCCCC
Confidence 5555556899999999998877642 3677888876321 579999 77 888888877633
Q ss_pred ccEEEE------eCCCcCCccCCCCcEEE--EccCCc--EEEEeCCCCEEEEEEc----CCCcEEEEEeC--CCCCceeE
Q psy5768 73 KRETVV------SQKKYPAVTACNLHIAV--DWIAQN--IYWSDPKENVIEVARL----TGQYRYVLISG--GVDQPSAL 136 (652)
Q Consensus 73 ~~~~v~------~~~~~~~p~~~~~~lav--Dw~~~~--lY~~d~~~~~I~v~~~----dg~~~~~l~~~--~~~~P~~i 136 (652)
....+. .+. +..|. ||++ +..++. +|+++. .++++...+ +|.....++.. .-.+|.++
T Consensus 112 ~l~~i~~~~~pv~t~-~~~py----Glcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Egc 185 (355)
T 3amr_A 112 TLQSMTDPDHPIATA-INEVY----GFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGM 185 (355)
T ss_dssp CEEECSCTTSCEECC-CSSCC----CEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEE
T ss_pred ceeeccccccCcCCC-CCCee----EEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEecCCCCcceE
Confidence 223331 133 45666 9999 887776 555554 478877554 33232222221 12589999
Q ss_pred EEcCCCCeEEEEecCCCCeEEEEeCCCCC---cEEEEee---ccc-CceeEEEecc
Q psy5768 137 AVDPESGYLFWSESGKIPLIARAGLDGKK---QTILAQE---IIM-PIKDITLDLK 185 (652)
Q Consensus 137 avd~~~g~lywtd~~~~~~I~~~~ldg~~---~~~~~~~---~~~-~p~gl~lD~~ 185 (652)
++|+..|+||.+++. ..|++.+.+... ++.+..- .+. .|.||+|.+.
T Consensus 186 vvDd~~g~Lyv~eEd--~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~ 239 (355)
T 3amr_A 186 AADDEYGRLYIAEED--EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA 239 (355)
T ss_dssp EEETTTTEEEEEETT--TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred EEcCCCCeEEEeccc--ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec
Confidence 999999999999985 469999965332 3333221 243 7999999744
No 159
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.24 E-value=5.9e-07 Score=65.21 Aligned_cols=37 Identities=38% Similarity=0.846 Sum_probs=33.1
Q ss_pred CCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 551 C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
|..+|++|+|+|+.+++ +|+|.|+.||.|..| ++|.+
T Consensus 1 C~~~ng~C~~~C~n~~g-s~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 1 CSLDNGGCDQFCREERS-EVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp CCTTTTSSSSCCCEETT-EECCCCCTTEEECTTSSCEEE
T ss_pred CCCCCCCcCCEeEcCCC-CeEEeCCCCcEECCCCCcccc
Confidence 66778999999998876 799999999999999 89976
No 160
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.18 E-value=1.1e-06 Score=96.65 Aligned_cols=75 Identities=24% Similarity=0.442 Sum_probs=49.8
Q ss_pred ceeeeccCceeec-cC-CcccCcccccCCCceeec-cCeecCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCC
Q psy5768 569 QVVCSCFTGKVLM-ED-NRSCTINTVCSEHDFKCS-DGMCIPFNQTCDRVYNCHDKSDEGILYCAMRDCRPGYFKCDNNK 645 (652)
Q Consensus 569 ~~~C~Cp~g~~l~-~d-~~C~~~~~~C~~~~f~C~-~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~~~C~~~~f~C~~~~ 645 (652)
...|..+.+.... .. ..|.+ +..|. .+|+|. +|+||+..|+|||++||.|+|||.. |.. +....+.|....
T Consensus 41 G~~C~~~l~d~~~C~~~~~c~~-~~~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~--C~~--~~~~~~~C~~~~ 114 (554)
T 3ojy_A 41 GTICSGDIWDQASCSSSTTCVR-QAQCG-QDFQCKETGRCLKRHLVCNGDQDCLDGSDEDD--CED--VRAIDEDCSQYE 114 (554)
T ss_dssp CCCCCSCSEEEEECCCCCCC---CCCCS-SSEECSSSCCEECGGGTTSSSCCSSSCTTSSS--CCS--CCCCCTTTTTSC
T ss_pred CCCCCCccccccCCCCCCCCcc-cCCCC-CcCccCCCCEEcccccccCCcccCCCcccccc--CCC--CCCCcccccccc
Confidence 4556655333221 11 44532 45674 799999 8999999999999999999999987 753 222345565555
Q ss_pred cccC
Q psy5768 646 CILS 649 (652)
Q Consensus 646 Ci~~ 649 (652)
+||.
T Consensus 115 ~iPg 118 (554)
T 3ojy_A 115 PIPG 118 (554)
T ss_dssp BCTT
T ss_pred ccCc
Confidence 6553
No 161
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.16 E-value=0.00044 Score=71.04 Aligned_cols=177 Identities=9% Similarity=0.106 Sum_probs=109.9
Q ss_pred ccEEEEeccCCcceEEeeccCceeeeEEEccC-------CEEEEEeCC--CCeEEEEEcCCCCCccEEEEE-----eCCC
Q psy5768 336 GTINSVFFNGSNHRVLLERQGSVEGLAYEYVH-------NYLYWTCNN--DATINKIDLDSPKAQRIVVVR-----LGQH 401 (652)
Q Consensus 336 ~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~-------~~LYwtd~~--~~~I~~~~~~~~~~~~~~~~~-----~~~~ 401 (652)
+.++.++++|...+.+- .+.+.++.+-.-- ..+|.++.. .++|.+++++........+.. .+.+
T Consensus 50 ~gL~Vydl~G~~l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAI 127 (355)
T ss_dssp TEEEEEETTSCEEEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCC
T ss_pred CCEEEEcCCCcEEEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCC
Confidence 34555555554333321 1344444443311 146889988 899999988643322122200 1345
Q ss_pred CCceEEEE--eCCCC--EEEEEecCCCCCceEEEee--c--CCCceEEEEc-C-CCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 402 DKPRGIDI--DSCDS--RIYWTNWNSHLPSIQRAFF--S--GFGTESIITT-D-ITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 402 ~~P~~Iav--dp~~g--~Lywtd~~~~~~~I~r~~l--d--G~~~~~l~~~-~-l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
..|.||++ +|..+ ++|+++.. ++++...+ + |.....++.+ . -..|.|+++|...++||.++...+ |
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~---G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G-I 203 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKE---GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA-I 203 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSS---SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-E
T ss_pred CCeeEEEEEecCCCCcEEEEEECCC---CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce-E
Confidence 89999999 88777 57777654 36666554 2 2222233321 1 247889999999999999999865 9
Q ss_pred EEEecCCC---ceEEEecC---CC-CceeEEEEe-C----CEEEEEcCCCCeEEEEEcc
Q psy5768 472 ERCDYDGT---NRIVLSKI---SP-LHPFDMAVY-G----EFIFWTDWVIHAVLRANKY 518 (652)
Q Consensus 472 ~~~~ldG~---~~~~l~~~---~~-~~p~glav~-~----~~lYwtd~~~~~I~~~~k~ 518 (652)
++++.+.. .++.+... .+ ..|-||+++ . +||+.++..+++....+..
T Consensus 204 w~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 99996632 24444221 22 379999996 3 4999999988887666664
No 162
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.14 E-value=5.4e-05 Score=80.36 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=95.3
Q ss_pred EEEEcCCCeEEEee------------------cccccEEEEeccCCcc-eEEeec--cCceeeeEE--EccCCEEEEEeC
Q psy5768 319 LSYDYKRKTLFYSD------------------IQKGTINSVFFNGSNH-RVLLER--QGSVEGLAY--EYVHNYLYWTCN 375 (652)
Q Consensus 319 v~~D~~~~~lywsd------------------~~~~~I~~~~~~g~~~-~~i~~~--~~~~~glAv--Dw~~~~LYwtd~ 375 (652)
+-|.+..+.+|.++ ...++|..++++.... +++-.+ -..|..|++ ++.++.+|.+..
T Consensus 193 ~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 193 FWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred EEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 44466666667665 2357777777764321 222221 136778877 999999999998
Q ss_pred -----CCCeEEEEEcCCCCCccEEEEEeCC-----------------CCCceEEEEeCCCCEEEEEecCCCCCceEEEee
Q psy5768 376 -----NDATINKIDLDSPKAQRIVVVRLGQ-----------------HDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFF 433 (652)
Q Consensus 376 -----~~~~I~~~~~~~~~~~~~~~~~~~~-----------------~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~l 433 (652)
..++|.++..++.......++.... ...|.+|+++|..++||+++|+.. .|....+
T Consensus 273 ~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d--~VavfdV 350 (462)
T 2ece_A 273 VSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIG--EVRQYDI 350 (462)
T ss_dssp EETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTT--EEEEEEC
T ss_pred eeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCC--EEEEEEe
Confidence 8889988776541101222221111 256899999999999999999975 6666555
Q ss_pred c-CCCceEEEEcCCC----------------CCceEEEecCCCEEEEEe
Q psy5768 434 S-GFGTESIITTDIT----------------MPNALALDHQAEKLFWGD 465 (652)
Q Consensus 434 d-G~~~~~l~~~~l~----------------~P~glaiD~~~~~LYw~D 465 (652)
+ ..+.+.+-...+. +|.+++|++++++||++.
T Consensus 351 ~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 351 SNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 3 4333333322222 699999999999999998
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.13 E-value=0.0069 Score=62.86 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=69.1
Q ss_pred EEEEEEEcCCCeEEEeecc-cc---cEEEEeccCCcceEEeecc------CceeeeEEEccCCEEEEEe--------CCC
Q psy5768 316 IIELSYDYKRKTLFYSDIQ-KG---TINSVFFNGSNHRVLLERQ------GSVEGLAYEYVHNYLYWTC--------NND 377 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~-~~---~I~~~~~~g~~~~~i~~~~------~~~~glAvDw~~~~LYwtd--------~~~ 377 (652)
+..+.|.+..++|+++... .. .|+.+++.+...+.+.... ..+.++++.+.++.|+++- ...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 4456777777777554332 22 3888888765544443211 1256678888888888753 445
Q ss_pred CeEEEEEcCCCCCccEEEEEeCC-CC--------CceEEEEeCCCCEEEEEecCCCCCceEEEeecC
Q psy5768 378 ATINKIDLDSPKAQRIVVVRLGQ-HD--------KPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSG 435 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~~~-~~--------~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG 435 (652)
..|.++++.+.. .+.+..... .. ....++..|...+|+++......+.|+++.+..
T Consensus 320 ~~i~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 320 PFLYVFNMKNGT--QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp CEEEEEETTTTE--EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred CEEEEEeccCCc--eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 689899887532 222222111 00 356788999888888876544446788777653
No 164
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.08 E-value=1.2e-06 Score=64.66 Aligned_cols=39 Identities=33% Similarity=0.767 Sum_probs=34.9
Q ss_pred CCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
+.|...|++|+|+|+.+++ +|+|.|+.||.|..| ++|.+
T Consensus 2 dEC~~~~~~C~~~C~nt~G-sy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQN-SVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp CCTTTGGGGCSSEEEEETT-EEEEECCTTEEECTTSSCEEE
T ss_pred ccccCCCCCcCcEeEcCCC-CeEEeCCCCCEECCCCCeecc
Confidence 6788888999999998876 699999999999998 88976
No 165
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.08 E-value=0.00031 Score=70.48 Aligned_cols=173 Identities=10% Similarity=-0.049 Sum_probs=119.5
Q ss_pred eEEEecCCCCeEEEEec-CCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeC
Q psy5768 2 FIAVSSPTQSKIVVCNL-EGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ 80 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~ 80 (652)
.|+|++..++.|+++|. +|+.+-++.... ...+.++++++.. +||++. ...|+.++++|...-.+-..
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~------~~~~~~~~~~pdG-~ilvs~----~~~V~~~d~~G~~~W~~~~~ 74 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEK------GWECNSVAATKAG-EILFSY----SKGAKMITRDGRELWNIAAP 74 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCT------TCCCCEEEECTTS-CEEEEC----BSEEEEECTTSCEEEEEECC
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCc------cCCCcCeEECCCC-CEEEeC----CCCEEEECCCCCEEEEEcCC
Confidence 47899999999999999 899887777521 1367889999865 555554 56799999988755444221
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeCC-CCEEEEEEcCCCcEEEEEe-CC----CCCceeEEEcCCCCeEEEEecCCCC
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDPK-ENVIEVARLTGQYRYVLIS-GG----VDQPSALAVDPESGYLFWSESGKIP 154 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~~-~~~I~v~~~dg~~~~~l~~-~~----~~~P~~iavd~~~g~lywtd~~~~~ 154 (652)
. -..+. +.++.. .+++++++.. .++|..++.+|+....+-- .. ...|+.+++++ +|.+++++.. ..
T Consensus 75 ~-~~~~~----~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~-~~ 146 (276)
T 3no2_A 75 A-GCEMQ----TARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFA-TS 146 (276)
T ss_dssp T-TCEEE----EEEECT-TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETT-TT
T ss_pred C-Ccccc----ccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecC-CC
Confidence 1 12234 556654 6788888877 7889999999986554432 11 23678889987 6777788875 56
Q ss_pred eEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 155 LIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 155 ~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
+|...+.+|+....+-.. .+|.++.++. ++.+++++.++
T Consensus 147 ~v~~~d~~G~~~w~~~~~--~~~~~~~~~~-~g~~~v~~~~~ 185 (276)
T 3no2_A 147 EVREIAPNGQLLNSVKLS--GTPFSSAFLD-NGDCLVACGDA 185 (276)
T ss_dssp EEEEECTTSCEEEEEECS--SCCCEEEECT-TSCEEEECBTT
T ss_pred EEEEECCCCCEEEEEECC--CCccceeEcC-CCCEEEEeCCC
Confidence 899998888755554332 4677887764 45666666653
No 166
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.05 E-value=0.00041 Score=68.57 Aligned_cols=199 Identities=7% Similarity=-0.016 Sum_probs=129.8
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccC-CcceEEeecc--CceeeeEEEccCCEEEEEeCC---CCeEEEEEcCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNG-SNHRVLLERQ--GSVEGLAYEYVHNYLYWTCNN---DATINKIDLDS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g-~~~~~i~~~~--~~~~glAvDw~~~~LYwtd~~---~~~I~~~~~~~ 387 (652)
..+.++++.+..+.|++.. .+.|+..++++ .....+.... ..+..+++.+.++.|+++... ...|+.+++.+
T Consensus 42 ~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred cceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 3467888998888888765 46899998887 5555544332 467889999999999998743 56788888765
Q ss_pred CCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC-
Q psy5768 388 PKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA- 466 (652)
Q Consensus 388 ~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~- 466 (652)
.. ... +.....+..+++.|...+|+++.......+|+...+++.....+.. .-..+..+++++.++.|+++..
T Consensus 120 ~~--~~~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 193 (297)
T 2ojh_A 120 GT--PRL---MTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH-GEGRNDGPDYSPDGRWIYFNSSR 193 (297)
T ss_dssp CC--CEE---CCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC-SSSCEEEEEECTTSSEEEEEECT
T ss_pred Cc--eEE---eecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc-CCCccccceECCCCCEEEEEecC
Confidence 32 122 2334457889999988888876543332367777776655433322 2345678999999998888753
Q ss_pred -CCCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCC----------CCeEEEEEccCCc
Q psy5768 467 -RLDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWV----------IHAVLRANKYTGE 521 (652)
Q Consensus 467 -~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~----------~~~I~~~~k~~g~ 521 (652)
+...|+.++.++...+.+.... .....+++. +.+|++.... ...|+..+..+++
T Consensus 194 ~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 194 TGQMQIWRVRVDGSSVERITDSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp TSSCEEEEEETTSSCEEECCCCS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred CCCccEEEECCCCCCcEEEecCC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 4557777877776665554322 334555554 4567665442 2456666665554
No 167
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.02 E-value=0.063 Score=65.13 Aligned_cols=432 Identities=7% Similarity=-0.040 Sum_probs=230.2
Q ss_pred CCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEE
Q psy5768 37 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVAR 116 (652)
Q Consensus 37 ~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~ 116 (652)
...+.++++++.+.+|.... ..+.|..++.........+... ...+. .+++.+.++.| .+-+..+.|.+.+
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~---~d~~i~vw~~~~~~~~~~~~~h-~~~v~----~~~~s~~~~~l-~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCG---ADKTLQVFKAETGEKLLDIKAH-EDEVL----CCAFSSDDSYI-ATCSADKKVKIWD 685 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTCCEEEEECCC-SSCEE----EEEECTTSSEE-EEEETTSEEEEEE
T ss_pred cccEEEEEECCCCCEEEEEe---CCCeEEEEECCCCCEEEEeccC-CCCEE----EEEEecCCCEE-EEEeCCCeEEEEE
Confidence 35789999999888887655 5678888888655433334444 45567 88888755544 4444578899999
Q ss_pred cCCCcEEEEEeCCCCCceeEEEcCCCCe-EEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 117 LTGQYRYVLISGGVDQPSALAVDPESGY-LFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 117 ~dg~~~~~l~~~~~~~P~~iavd~~~g~-lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
.........+.........++..|.... ++.+- +....|..-+++...........-...+.+++.+.+..|.....+
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg-~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATG-SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEE-ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEE-eCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 8755444444444456778888875333 33332 234567666766544333332223567888888877777666666
Q ss_pred CCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccc
Q psy5768 196 KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 196 g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
| ..+..-......... +. ........ ..+-..... ...|.+ ..
T Consensus 765 g-~v~vwd~~~~~~~~~--~~-----------~~~~~~~~-~~~~~~~~~-----------~v~~~~-----------~s 807 (1249)
T 3sfz_A 765 G-TLRLWDVRSANERKS--IN-----------VKRFFLSS-EDPPEDVEV-----------IVKCCS-----------WS 807 (1249)
T ss_dssp S-EEEEEEGGGTEEEEE--EE-----------CCCCC---------CCCC-----------CBCCCC-----------BC
T ss_pred C-eEEEEeCCCCcccce--ec-----------cccccccc-CCccccccc-----------eEEEEE-----------EC
Confidence 3 332221111111000 00 00000000 000000000 000000 00
Q ss_pred ccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-ec
Q psy5768 276 EYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ER 354 (652)
Q Consensus 276 ~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~ 354 (652)
+...+++.+....+...++..+. ....+.. .+...+..++|.+....++... ..+.|...+++........ ..
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~----~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~h 881 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSG----LLAEIHT-GHHSTIQYCDFSPYDHLAVIAL-SQYCVELWNIDSRLKVADCRGH 881 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCC----EEEEEEC-SSSSCCCEEEECSSTTEEEEEC-SSSCEEEEETTTTEEEEEECCC
T ss_pred CCCCEEEEEcCCcEEEEEecCCC----ceeEEcC-CCCCceEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceeeecCCC
Confidence 11234555555666666652221 1111211 2224456788888776666554 4577887777654333333 34
Q ss_pred cCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC---------------------------ccEEEEE-------eCC
Q psy5768 355 QGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA---------------------------QRIVVVR-------LGQ 400 (652)
Q Consensus 355 ~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~---------------------------~~~~~~~-------~~~ 400 (652)
...+.++++.+.++.|+-+ +..+.|.+-++..... ....+.. ...
T Consensus 882 ~~~v~~v~~spdg~~l~s~-s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1249)
T 3sfz_A 882 LSWVHGVMFSPDGSSFLTA-SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLP 960 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEEC
T ss_pred ccceEEEEECCCCCEEEEE-eCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcc
Confidence 4568899999877766544 4556666665431000 0000000 011
Q ss_pred CCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCc
Q psy5768 401 HDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480 (652)
Q Consensus 401 ~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~ 480 (652)
......++++|...++...... +.|....+............-....++++.+.++.|..+. ..+.|...++....
T Consensus 961 ~~~i~~~~~sp~g~~l~~g~~~---g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 961 EAQVSCCCLSPHLEYVAFGDED---GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS-EDSVIQVWNWQTGD 1036 (1249)
T ss_dssp CSCEEEEEECTTSSEEEEEETT---SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC-SSSBEEEEETTTTE
T ss_pred cCcEEEEEEcCCCCEEEEEcCC---CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCc
Confidence 2456788999987777776543 3565555554333222222234567899998887777654 44678888887655
Q ss_pred eEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 481 RIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 481 ~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
...+.. .......+++..+..+.+-...+.|...+..+|+....+.
T Consensus 1037 ~~~~~~-~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1037 YVFLQA-HQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp EECCBC-CSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred eEEEec-CCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 443222 2244566666654334444456677777777776665554
No 168
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.02 E-value=0.031 Score=61.38 Aligned_cols=456 Identities=13% Similarity=0.114 Sum_probs=238.7
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
|+.+ ..++.|.++|.+|+.+.++..+. ..+.+|+|+|.+.+|.-.. ..+.|..++++|.....+ ...
T Consensus 31 las~-~~d~~v~iWd~~~~~~~~l~gh~-------~~V~~l~fspdg~~las~~---~d~~i~vWd~~~~~~~~~-~~~- 97 (577)
T 2ymu_A 31 IASA-SDDKTVKLWNRNGQLLQTLTGHS-------SSVWGVAFSPDGQTIASAS---DDKTVKLWNRNGQLLQTL-TGH- 97 (577)
T ss_dssp EEEE-ETTSEEEEECTTSCEEEEEECCS-------SCEEEEEECTTSSEEEEEE---TTSCEEEEETTSCEEEEE-CCC-
T ss_pred EEEE-eCCCEEEEEECCCCEEEEEeCCC-------CCEEEEEECCCCCEEEEEe---CCCEEEEEECCCCEEEEE-ECC-
Confidence 3444 34577999999999888876532 4789999999877777554 567888899887655444 333
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
...+. ++++....+.|. +-...+.+...+..+...... .........++..|....++..... ..+.....+
T Consensus 98 ~~~v~----~~~~s~d~~~l~-~~~~d~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 169 (577)
T 2ymu_A 98 SSSVR----GVAFSPDGQTIA-SASDDKTVKLWNRNGQLLQTL-TGHSSSVWGVAFSPDGQTIASASDD--KTVKLWNRN 169 (577)
T ss_dssp SSCEE----EEEECTTSSEEE-EEETTSCEEEEETTCCEEEEE-CCCSSCEEEEEECTTSSCEEEEETT--SEEEEECTT
T ss_pred CCCEE----EEEECCCCCEEE-EEcCCCceeecccccceeeec-cCCCCceeeeeeecCCccceecccc--cceeccccc
Confidence 45567 888877555444 333456666666666544333 2233455677777765556554432 233333333
Q ss_pred CCCcEEEEeecccCceeEEEeccCCEEEEEeCCC---------CcEEEEEecCCCCceEEEeecCCC-----CCcceeee
Q psy5768 163 GKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK---------GNIHIISLSNLSDVSTISMKPYGD-----SYLKDIKI 228 (652)
Q Consensus 163 g~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g---------~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~i~v 228 (652)
+..... ..........+++.+.+..|+-...+| ...+.+. ........+++.++.. ..-..+++
T Consensus 170 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~i~~ 247 (577)
T 2ymu_A 170 GQLLQT-LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKL 247 (577)
T ss_dssp SCEEEE-EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred eeeeee-ccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEe-cCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 322222 112233445566666555555444332 1111110 0000111111111100 00011222
Q ss_pred eeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccc---ccceEEEEee-ecceeEEecCCCCCCCCCc
Q psy5768 229 YSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS---EYDAFIMYSR-VNRIDSIHMTDKSDLNSPF 304 (652)
Q Consensus 229 ~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~---~~~~~Ll~s~-~~~i~~i~l~~~~~~~~p~ 304 (652)
|+.. +.+-. ...+.. ...++. +....|+.+. ...|+..+. ++. ..
T Consensus 248 w~~~------------~~~~~--~~~~~~------------~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~----~~ 296 (577)
T 2ymu_A 248 WNRN------------GQLLQ--TLTGHS------------SSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQ----LL 296 (577)
T ss_dssp ECTT------------SCEEE--EECCCS------------SCEEEEEECTTSSEEEEEETTSCEEEEET-TSC----EE
T ss_pred EeCC------------CCEEE--EEecCC------------CCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCc----EE
Confidence 2210 00000 000000 000111 1112333333 233444443 221 11
Q ss_pred eeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEE
Q psy5768 305 ESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKID 384 (652)
Q Consensus 305 ~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~ 384 (652)
..+. .+...+.+++|.+..+.|.-. ...+.|...++++.....+......+.++++.+.++.|.... ..+.|.+.+
T Consensus 297 ~~~~--~h~~~v~~~~~~~~~~~l~t~-~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~v~~~~ 372 (577)
T 2ymu_A 297 QTLT--GHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS-DDKTVKLWN 372 (577)
T ss_dssp EEEC--CCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEE
T ss_pred EEEe--cCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEc
Confidence 2222 223457789998876655544 345778777877765544444445678899998888776544 457787777
Q ss_pred cCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEE
Q psy5768 385 LDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWG 464 (652)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~ 464 (652)
..+. ....+ ......+++|++.|...+|...... ..|...+.+|.....+.. .-....+|++.+.+++|..+
T Consensus 373 ~~~~---~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d---~~v~~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 373 RNGQ---LLQTL-TGHSSSVRGVAFSPDGQTIASASDD---KTVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDDQTIASA 444 (577)
T ss_dssp TTCC---EEEEE-ECCSSCEEEEEECTTSSCEEEEETT---SEEEEECTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEE
T ss_pred CCCC---EEEEe-cCCCCCeEEEEECCCCCEEEEEeCC---CEEEEEeCCCCEEEEecC-CCCCeEEEEECCCCCEEEEE
Confidence 6542 12222 2344678899999977777665443 255555666654333332 22345688998888777765
Q ss_pred eCCCCeEEEEecCCCceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 465 DARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 465 D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
. ..+.|...++++.....+... .....++++.. +.+..+-...+.|..-+. +|+..+.+.
T Consensus 445 ~-~d~~v~~w~~~~~~~~~~~~~-~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~ 505 (577)
T 2ymu_A 445 S-DDKTVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 505 (577)
T ss_dssp E-TTSEEEEEETTSCEEEEEECC-SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred c-CCCEEEEEECCCCEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe
Confidence 4 345778888888766655442 24556777752 333344344555655553 555544444
No 169
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.01 E-value=0.00073 Score=70.49 Aligned_cols=174 Identities=13% Similarity=0.092 Sum_probs=115.2
Q ss_pred CCeEEEEecCCC---eeEEEe-cCCCCCCCCCCCeeEEEEE-CC------CCEEEEEeccCCcceEEEEEcCC-CccEEE
Q psy5768 10 QSKIVVCNLEGE---YQTTIL-SNESNDTSTLSKISSIAVW-PV------KGKMFWSNVTKQVVTIEMAFMDG-TKRETV 77 (652)
Q Consensus 10 ~~~I~~~~~~g~---~~~~~~-~~~~~~~~~~~~~~~v~~d-~~------~~~lyw~d~~~~~~~I~~~~~dg-s~~~~v 77 (652)
.-+|.++|+... .++++. +.. ....-+....|.+| .. ++++|.+| .....|..+++.. ..++++
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~--~~~~~S~l~di~VD~~~~~~~c~~~~aYItD--~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTR--LVEKPTYFGGFAVDVANPKGDCSETFVYITN--FLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGG--GCCCGGGEEEEEEEESCTTTTSCSEEEEEEE--TTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCceeEEEEECCHH--hcccCCccceEEEecccCCCCCCccEEEEEc--CCCCcEEEEECCCCcEEEEc
Confidence 458999999965 555543 211 11123577888898 32 68999999 7778888888763 334333
Q ss_pred E------------eCC-Cc---CCccCCCCcEEEEcc----CCcEEEEeCCCCEEEEEEc----CC---CcEEEEEeCC-
Q psy5768 78 V------------SQK-KY---PAVTACNLHIAVDWI----AQNIYWSDPKENVIEVARL----TG---QYRYVLISGG- 129 (652)
Q Consensus 78 ~------------~~~-~~---~~p~~~~~~lavDw~----~~~lY~~d~~~~~I~v~~~----dg---~~~~~l~~~~- 129 (652)
- -.| .+ .... |||+... .+.|||.-....+..+... +. ...+.+...+
T Consensus 198 ~~~~~pd~~~~~~i~G~~~~~~~Gi~----gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~ 273 (381)
T 3q6k_A 198 HPTFKAERPTKFDYGGKEYEFKAGIF----GITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGK 273 (381)
T ss_dssp CGGGSCCSCEEEEETTEEEEECCCEE----EEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCT
T ss_pred cCCCccccCcceEECCEEeEeccCce----EEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCC
Confidence 0 011 00 1234 8999887 7899999877778887762 22 2233444432
Q ss_pred CCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCC-----CCcEEEEeec-ccCceeEEEeccCCEEEEEe
Q psy5768 130 VDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-----KKQTILAQEI-IMPIKDITLDLKFFSAFYRN 193 (652)
Q Consensus 130 ~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg-----~~~~~~~~~~-~~~p~gl~lD~~~~~ly~~d 193 (652)
..+..++++|+.+|.||+++.. ...|.+-+.++ .+..+++... +.||.++++|. .+.||+..
T Consensus 274 ~s~~~~~~~D~~~G~ly~~~~~-~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~s 341 (381)
T 3q6k_A 274 YNDAIALAYDPKTKVIFFAEAN-TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMS 341 (381)
T ss_dssp TCCEEEEEECTTTCEEEEEESS-SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEE
T ss_pred CCCcceEEEeCCCCeEEEEecc-CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEE
Confidence 2445578999889999999986 56899988877 2335555444 89999999996 45788754
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.01 E-value=0.0037 Score=64.98 Aligned_cols=181 Identities=10% Similarity=-0.018 Sum_probs=105.4
Q ss_pred ccEEEEeccCCcceEEeeccCceeeeEEEc-cCCEEEEEeCC-----CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEE
Q psy5768 336 GTINSVFFNGSNHRVLLERQGSVEGLAYEY-VHNYLYWTCNN-----DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDI 409 (652)
Q Consensus 336 ~~I~~~~~~g~~~~~i~~~~~~~~glAvDw-~~~~LYwtd~~-----~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iav 409 (652)
..|+.+++.+...+.+......+..+++.+ .++.|+++... ...|+.+++++.. .+.+............+.
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceE
Confidence 456666665544444544444577889988 88888776643 4489999887643 222211110012446789
Q ss_pred eCCCCEEEEEecCCCCCc--eEEEeecCCCceEEEEcCC-----CCCceEEEecCCCEEEEEe--------CCCCeEEEE
Q psy5768 410 DSCDSRIYWTNWNSHLPS--IQRAFFSGFGTESIITTDI-----TMPNALALDHQAEKLFWGD--------ARLDKIERC 474 (652)
Q Consensus 410 dp~~g~Lywtd~~~~~~~--I~r~~ldG~~~~~l~~~~l-----~~P~glaiD~~~~~LYw~D--------~~~~~I~~~ 474 (652)
.|....|+++........ |+..++++...+.+....- ..|.++++.+++++|+++- .....|+.+
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 998777755443222223 9999998877665543221 1256667777888888753 445689999
Q ss_pred ecCCCceEEEecCCCC----------ceeEEEEe--CCEEEEEcCCC--CeEEEEEcc
Q psy5768 475 DYDGTNRIVLSKISPL----------HPFDMAVY--GEFIFWTDWVI--HAVLRANKY 518 (652)
Q Consensus 475 ~ldG~~~~~l~~~~~~----------~p~glav~--~~~lYwtd~~~--~~I~~~~k~ 518 (652)
++++...+.+...... ....+++. +.+|+++.... ..|++++..
T Consensus 326 d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 326 NMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp ETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred eccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 9998776666543210 23444553 55777765332 346666543
No 171
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.98 E-value=0.00081 Score=67.42 Aligned_cols=190 Identities=9% Similarity=-0.042 Sum_probs=117.5
Q ss_pred eEEEeecccccEEEEec-cCCcceEEee-ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCc
Q psy5768 327 TLFYSDIQKGTINSVFF-NGSNHRVLLE-RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKP 404 (652)
Q Consensus 327 ~lywsd~~~~~I~~~~~-~g~~~~~i~~-~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P 404 (652)
.+++++...++|+.++. +|.....+-. ....+.++++++.++ ||.+ ..+.|..++.+|. ..--+.......+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilvs--~~~~V~~~d~~G~---~~W~~~~~~~~~~ 79 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFS--YSKGAKMITRDGR---ELWNIAAPAGCEM 79 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEEE--CBSEEEEECTTSC---EEEEEECCTTCEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEEe--CCCCEEEECCCCC---EEEEEcCCCCccc
Confidence 34444444445554444 3322222211 113578888887655 5444 3466777776442 1112221112345
Q ss_pred eEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-C----CCCCceEEEecCCCEEEEEeCCCCeEEEEecCCC
Q psy5768 405 RGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-D----ITMPNALALDHQAEKLFWGDARLDKIERCDYDGT 479 (652)
Q Consensus 405 ~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-~----l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~ 479 (652)
.+.++.| .|.+++++.+.. .+|...+.+|.....+-.. . ..+|.+++++.. +.+++++...++|..++.+|.
T Consensus 80 ~~~~~~~-dG~~lv~~~~~~-~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGHP-STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPNGQ 156 (276)
T ss_dssp EEEEECT-TSCEEEEEESTT-EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTTSC
T ss_pred cccEECC-CCCEEEEecCCC-CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEecCCCEEEEECCCCC
Confidence 5677777 577777776522 3777777777654433211 1 235678888865 456678888899999999987
Q ss_pred ceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 480 NRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 480 ~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
....+-. . ..|+++.+. ++.+++++...++|..+++.+|+.+-.+.
T Consensus 157 ~~w~~~~-~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 157 LLNSVKL-S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEEEEC-S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEEEEEC-C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 6655543 2 578888876 57889999888899999999898776665
No 172
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.94 E-value=0.0005 Score=71.74 Aligned_cols=142 Identities=10% Similarity=0.147 Sum_probs=102.2
Q ss_pred eEEEecCCCCeEEEEecCCCeeEEEecCCCCCCC---------C---CCCeeEEEEECC----CCEEEEEeccCCcceEE
Q psy5768 2 FIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTS---------T---LSKISSIAVWPV----KGKMFWSNVTKQVVTIE 65 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~---------~---~~~~~~v~~d~~----~~~lyw~d~~~~~~~I~ 65 (652)
+++|+|.....|.++|+....-.++......... . ...+.+|++++. ...|||.- ....+++
T Consensus 172 ~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p--lss~~ly 249 (381)
T 3q6k_A 172 FVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA--GSAIKVY 249 (381)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE--SSCSEEE
T ss_pred EEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE--CCCCcEE
Confidence 6899999999999999995544444411111100 0 147889999998 78999999 7777899
Q ss_pred EEE---c-CCC---ccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCC-C----cEEEEEe-CCCCC
Q psy5768 66 MAF---M-DGT---KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTG-Q----YRYVLIS-GGVDQ 132 (652)
Q Consensus 66 ~~~---~-dgs---~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg-~----~~~~l~~-~~~~~ 132 (652)
++. + +.+ ..+.+...+...... ++|+|..+++||+++...+.|..-+.++ . ...+++. ..+..
T Consensus 250 ~V~T~~L~~~~~~~~v~~~G~kg~~s~~~----~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~ 325 (381)
T 3q6k_A 250 SVNTKELKQKGGKLNPELLGNRGKYNDAI----ALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF 325 (381)
T ss_dssp EEEHHHHSSTTCCCCCEEEEECCTTCCEE----EEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS
T ss_pred EEEHHHhhCcchhhceEEeeecCCCCCcc----eEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc
Confidence 987 2 232 345555544123334 6889877999999999999999999998 3 3345554 46778
Q ss_pred ceeEEEcCCCCeEEEEec
Q psy5768 133 PSALAVDPESGYLFWSES 150 (652)
Q Consensus 133 P~~iavd~~~g~lywtd~ 150 (652)
|.++++|+ +|+||++..
T Consensus 326 pd~~~i~~-~g~Lwv~sn 342 (381)
T 3q6k_A 326 GTDISVDS-KGGLWFMSN 342 (381)
T ss_dssp EEEEEECT-TSCEEEEEC
T ss_pred cCeEEECC-CCeEEEEEC
Confidence 99999996 789999864
No 173
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.92 E-value=0.0025 Score=67.75 Aligned_cols=181 Identities=9% Similarity=0.026 Sum_probs=122.9
Q ss_pred ccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCC--CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCC
Q psy5768 336 GTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNND--ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCD 413 (652)
Q Consensus 336 ~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~--~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~ 413 (652)
+.|+..+++|.....+......+..+++.+.++.|+++.... ..|.+.++.+.. ... +. .......+++++|..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--~~~-l~-~~~~~~~~~~~spdg 234 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--VRQ-VA-SFPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEE-EE-CCSSCEEEEEECTTS
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--EEE-ee-cCCCcccCEEEcCCC
Confidence 567777777766566655556788999999999999987643 589888886532 222 22 233567899999988
Q ss_pred CEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC--CCCeEEEEecCCCceEEEecCCCCc
Q psy5768 414 SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA--RLDKIERCDYDGTNRIVLSKISPLH 491 (652)
Q Consensus 414 g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~--~~~~I~~~~ldG~~~~~l~~~~~~~ 491 (652)
.+|+++........|+..++.+.....+.. .-.....+++.+++++|+++.. +...|+.+++++...+.+.... ..
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~-~~ 312 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG-SQ 312 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS-SE
T ss_pred CEEEEEEecCCCceEEEEECCCCCEEeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC-Cc
Confidence 888887644333479988887765443332 2234568899999998988754 3348999999887655443322 44
Q ss_pred eeEEEEe--CCEEEEEcCC--CCeEEEEEccCCce
Q psy5768 492 PFDMAVY--GEFIFWTDWV--IHAVLRANKYTGEE 522 (652)
Q Consensus 492 p~glav~--~~~lYwtd~~--~~~I~~~~k~~g~~ 522 (652)
..++++. +.+|+++... ...|+..+..+++.
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 5566664 5688887654 34788888766654
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.91 E-value=0.0021 Score=72.52 Aligned_cols=207 Identities=11% Similarity=-0.014 Sum_probs=129.4
Q ss_pred ceEEEEEEEcCCCeEEEeecc---------cccEEEEeccC------CcceEEe-eccCceeeeEEEccCCEEEEEeCCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQ---------KGTINSVFFNG------SNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNND 377 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~---------~~~I~~~~~~g------~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~ 377 (652)
..+.++++.+..++|+++... ...|+.+++++ ...+.+. .+.....++++.+.++.|+|+....
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECT
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCC
Confidence 346788999999999988643 15799999988 5555555 4455677889999999999987543
Q ss_pred -------CeEEEEEcCCCC--CccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcC--C
Q psy5768 378 -------ATINKIDLDSPK--AQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD--I 446 (652)
Q Consensus 378 -------~~I~~~~~~~~~--~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~--l 446 (652)
..|+++++++.. ...+.+.. .....+..++..|....+|.++.+ ...+|++.++++...+.+.... .
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-~~~~~~~~~~~spdg~l~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLG-GPEEAIAQAEWAPDGSLIVATDRT-GWWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEE-ETTBCEEEEEECTTSCEEEEECTT-SSCEEEEECTTTCCEEESSCCSSBS
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCC-CCCceEcceEECCCCeEEEEECCC-CCeEEEEEECCCCceeecccccccc
Confidence 479999987321 01222222 224678889999976644444443 2348998888665544443221 1
Q ss_pred CC------CceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEE-EEeCCEEEEEcCCC---CeEEEEE
Q psy5768 447 TM------PNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDM-AVYGEFIFWTDWVI---HAVLRAN 516 (652)
Q Consensus 447 ~~------P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~gl-av~~~~lYwtd~~~---~~I~~~~ 516 (652)
.. ...+++...+..+|.+..+..+|+.+++++...+.+... .....++ +..++.++++-... ..|++++
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP-WTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS-CCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred cCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC-CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 11 235666545554444433555788889987766555332 2344556 67777766654332 3688888
Q ss_pred ccCCceE
Q psy5768 517 KYTGEEV 523 (652)
Q Consensus 517 k~~g~~~ 523 (652)
..+|+..
T Consensus 367 ~~~g~~~ 373 (662)
T 3azo_A 367 TVTGRAR 373 (662)
T ss_dssp TTTCCEE
T ss_pred CCCCceE
Confidence 7666543
No 175
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.89 E-value=0.05 Score=59.64 Aligned_cols=469 Identities=13% Similarity=0.105 Sum_probs=240.8
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCc
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY 83 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~ 83 (652)
+++....+.|.++|++|+...++... -..+.+++++|....|.... ..+.+......+...... ... .
T Consensus 72 las~~~d~~i~vWd~~~~~~~~~~~~-------~~~v~~~~~s~d~~~l~~~~---~d~~~~~~~~~~~~~~~~-~~~-~ 139 (577)
T 2ymu_A 72 IASASDDKTVKLWNRNGQLLQTLTGH-------SSSVRGVAFSPDGQTIASAS---DDKTVKLWNRNGQLLQTL-TGH-S 139 (577)
T ss_dssp EEEEETTSCEEEEETTSCEEEEECCC-------SSCEEEEEECTTSSEEEEEE---TTSCEEEEETTCCEEEEE-CCC-S
T ss_pred EEEEeCCCEEEEEECCCCEEEEEECC-------CCCEEEEEECCCCCEEEEEc---CCCceeecccccceeeec-cCC-C
Confidence 33334567899999999877776542 35789999999888777655 456676676655533222 222 3
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCC
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 163 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg 163 (652)
..+. .+++......++... ....+.+...++...... .........++..|...+|+-.. ....|...+.++
T Consensus 140 ~~v~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~~w~~~~ 211 (577)
T 2ymu_A 140 SSVW----GVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTL-TGHSSSVWGVAFSPDGQTIASAS--DDKTVKLWNRNG 211 (577)
T ss_dssp SCEE----EEEECTTSSCEEEEE-TTSEEEEECTTSCEEEEE-ECCSSCEEEEEECTTSSCEEEEE--TTSEEEEECTTS
T ss_pred Ccee----eeeeecCCccceecc-cccceeccccceeeeeec-cCCCcceeeeeecCCCCEEEEEc--CCCEEEEEeCCC
Confidence 3444 666665555555444 345555555555543333 33345667888888555554433 244666666666
Q ss_pred CCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCC
Q psy5768 164 KKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVN 243 (652)
Q Consensus 164 ~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ 243 (652)
.....+... -.....+++.+.+..|.....+| ..+.. +.....+ .........+..+. |++..+... ....
T Consensus 212 ~~~~~~~~~-~~~v~~~~~s~dg~~l~~~~~d~-~i~~w---~~~~~~~-~~~~~~~~~v~~v~-~~~d~~~l~--~~~~ 282 (577)
T 2ymu_A 212 QLLQTLTGH-SSSVRGVAFSPDGQTIASASDDK-TVKLW---NRNGQLL-QTLTGHSSSVNGVA-FRPDGQTIA--SASD 282 (577)
T ss_dssp CEEEEEECC-SSCEEEEEECTTSSCEEEEETTS-CEEEE---CTTSCEE-EEECCCSSCEEEEE-ECTTSSEEE--EEET
T ss_pred cEEEEEecC-CCCEEEEEECCCCCEEEEEeCCC-EEEEE---eCCCCEE-EEEecCCCCEEEEE-EcCCCCEEE--EEeC
Confidence 544443322 34567888888777777665553 22211 1111000 00010000111111 111000000 0000
Q ss_pred CCCCcccceecCCCceEEEeCCccccCCCccc--cc-ceEEEEee-ecceeEEecCCCCCCCCCceeeeeccccceEEEE
Q psy5768 244 NGGCAELCLYNGVSAVCACAHGVVAQDGKSCS--EY-DAFIMYSR-VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIEL 319 (652)
Q Consensus 244 ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~--~~-~~~Ll~s~-~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v 319 (652)
++ .+-+....+....-..|. .....+. .+ ..+|+.+. ...|+.-++ +... +..+. .+...+.++
T Consensus 283 d~---~i~~w~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~-~~~~----~~~~~--~~~~~v~~~ 350 (577)
T 2ymu_A 283 DK---TVKLWNRNGQLLQTLTGH--SSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQH----LQTLT--GHSSSVWGV 350 (577)
T ss_dssp TS---CEEEEETTSCEEEEECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE----EEEEC--CCSSCEEEE
T ss_pred CC---EEEEEeCCCcEEEEEecC--CCCeEEEEECCCCCEEEEEeCCCeEEEEeC-CCCe----eEEEe--CCCCCEEEE
Confidence 00 000000000000000000 0000010 11 12333332 234444444 2211 11221 222456788
Q ss_pred EEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeC
Q psy5768 320 SYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLG 399 (652)
Q Consensus 320 ~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~ 399 (652)
+|.+..+.|.... ..+.|...+.++.....+......+.+|++.+.++.|... ...+.|.+.+..+. ....+ ..
T Consensus 351 ~~s~~g~~l~~~~-~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~~---~~~~~-~~ 424 (577)
T 2ymu_A 351 AFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQ---LLQTL-TG 424 (577)
T ss_dssp EECTTSSEEEEEE-TTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEE-ETTSEEEEECTTCC---EEEEE-EC
T ss_pred EECCCCCEEEEEe-CCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCC---EEEEe-cC
Confidence 9988777666554 3466777777765444444444578899999888777654 34567777775442 12222 23
Q ss_pred CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCC
Q psy5768 400 QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGT 479 (652)
Q Consensus 400 ~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~ 479 (652)
......+|++.|...+|..+... ..|...+++|.....+.. .-.....+++.+.++.|..+. ..+.|...+.+|.
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~d---~~v~~w~~~~~~~~~~~~-~~~~v~~~~~spd~~~las~~-~d~~i~iw~~~~~ 499 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASDD---KTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQ 499 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT---SEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSC
T ss_pred CCCCeEEEEECCCCCEEEEEcCC---CEEEEEECCCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEe-CCCEEEEEcCCCC
Confidence 34567889999977777665443 256656676654444432 223567899998877776654 3457787888887
Q ss_pred ceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 480 NRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 480 ~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
..+.+.. ......+|++. +.+|.-. ...+.|..-+. +|+....+.
T Consensus 500 ~~~~~~~-h~~~v~~l~~s~dg~~l~s~-~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 500 LLQTLTG-HSSSVRGVAFSPDGQTIASA-SDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp EEEEEEC-CSSCEEEEEECTTSSCEEEE-ETTSEEEEECT-TSCEEEEEE
T ss_pred EEEEEeC-CCCCEEEEEEcCCCCEEEEE-ECcCEEEEEeC-CCCEEEEEc
Confidence 6666543 22456777775 2344433 34455655553 555444443
No 176
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.88 E-value=0.0074 Score=68.54 Aligned_cols=317 Identities=8% Similarity=0.007 Sum_probs=166.4
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL 117 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~ 117 (652)
..+.++++++. +++.++- .+.|+.+++.+.....+... -..+. .+++...++.|+++. .+.|.+.++
T Consensus 82 ~~v~~~~~spd-~~~~~~~----~~~i~~~d~~~~~~~~l~~~--~~~~~----~~~~SpdG~~la~~~--~~~i~v~~~ 148 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT----QGGLVGFDMLARKVTYLFDT--NEETA----SLDFSPVGDRVAYVR--NHNLYIARG 148 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE----TTEEEEEETTTTEEEEEECC--TTCCT----TCEECTTSSEEEEEE--TTEEEEEEC
T ss_pred cCceeEEECCC-CeEEEEE----CCEEEEEECCCCceEEccCC--ccccc----CCcCCCCCCEEEEEE--CCeEEEEec
Confidence 46889999998 8887775 27899999887654444332 23456 888888787887764 478999988
Q ss_pred CC-----CcEEEEEeCCCC--------------CceeEEEcCCCCeEEEEecC--CCCeEEEEeCCCCCcEEEEeecccC
Q psy5768 118 TG-----QYRYVLISGGVD--------------QPSALAVDPESGYLFWSESG--KIPLIARAGLDGKKQTILAQEIIMP 176 (652)
Q Consensus 118 dg-----~~~~~l~~~~~~--------------~P~~iavd~~~g~lywtd~~--~~~~I~~~~ldg~~~~~~~~~~~~~ 176 (652)
++ ...+.+...... .+.+++..|...+|+++... ..+.+............ .. ...
T Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~-~~--~~y 225 (706)
T 2z3z_A 149 GKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES-KP--LYY 225 (706)
T ss_dssp BCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE-EE--ECC
T ss_pred CcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce-EE--eeC
Confidence 76 433333322211 25889999977778776532 12233333333222211 11 111
Q ss_pred ceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCC
Q psy5768 177 IKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGV 256 (652)
Q Consensus 177 p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~ 256 (652)
|..= -+....+||+.|.+++..+.+.........+ ..+ .|+ |
T Consensus 226 ~~~g-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-----------~~~-~~s------------------------p- 267 (706)
T 2z3z_A 226 PMAG-TPSHHVTVGIYHLATGKTVYLQTGEPKEKFL-----------TNL-SWS------------------------P- 267 (706)
T ss_dssp CBTT-SCCCEEEEEEEETTTTEEEECCCCSCTTCEE-----------EEE-EEC------------------------T-
T ss_pred CCCC-CCCCeeEEEEEECCCCceEeeccCCCCceeE-----------eeE-EEE------------------------C-
Confidence 1100 0113467888999876543321100000000 000 000 0
Q ss_pred CceEEEeCCccccCCCcccccceEEEEee------ecceeEEecCCCCCCCCCceeee-ecc--ccceEEEEEEEc--CC
Q psy5768 257 SAVCACAHGVVAQDGKSCSEYDAFIMYSR------VNRIDSIHMTDKSDLNSPFESIR-NST--MMKNIIELSYDY--KR 325 (652)
Q Consensus 257 ~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~------~~~i~~i~l~~~~~~~~p~~~~~-~~~--~~~~~~~v~~D~--~~ 325 (652)
|| .+|+++. ...|+.+++..+... ..+. ... ....+..+.|.+ ..
T Consensus 268 -------------dg-------~~l~~~~~~~~~~~~~v~~~d~~~g~~~----~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 268 -------------DE-------NILYVAEVNRAQNECKVNAYDAETGRFV----RTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp -------------TS-------SEEEEEEECTTSCEEEEEEEETTTCCEE----EEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred -------------CC-------CEEEEEEeCCCCCeeEEEEEECCCCcee----eEEEEccCCCeECccCCceeecCCCC
Confidence 11 1112111 013334443111010 1110 000 000012356666 44
Q ss_pred CeEEEeecc-cccEEEEeccCCcceEEeeccCceee-eEEEccCCEEEEEeCCCC----eEEEEEcCCCCCccEEEEEeC
Q psy5768 326 KTLFYSDIQ-KGTINSVFFNGSNHRVLLERQGSVEG-LAYEYVHNYLYWTCNNDA----TINKIDLDSPKAQRIVVVRLG 399 (652)
Q Consensus 326 ~~lywsd~~-~~~I~~~~~~g~~~~~i~~~~~~~~g-lAvDw~~~~LYwtd~~~~----~I~~~~~~~~~~~~~~~~~~~ 399 (652)
+.||.++.. ..+|+.++.++.....+..+...+.+ +++++.++.||++....+ .|+++++.+.. .+. +.
T Consensus 324 ~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~---l~ 398 (706)
T 2z3z_A 324 QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK--TKD---LT 398 (706)
T ss_dssp EEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC--CEE---SC
T ss_pred EEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC--cee---cc
Confidence 444444332 24677777666544444444334555 799999999999887654 78888876532 122 23
Q ss_pred CCCCceEEEEeCCCCEEEEEecCCC-CCceEEEeecCCC
Q psy5768 400 QHDKPRGIDIDSCDSRIYWTNWNSH-LPSIQRAFFSGFG 437 (652)
Q Consensus 400 ~~~~P~~Iavdp~~g~Lywtd~~~~-~~~I~r~~ldG~~ 437 (652)
......++++.|...+|.++-.... .+.|+..++++..
T Consensus 399 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 399 PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 3455778999998877777643322 3468888887765
No 177
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.88 E-value=0.00077 Score=66.55 Aligned_cols=196 Identities=14% Similarity=0.079 Sum_probs=120.1
Q ss_pred EEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecc---cccEEEEeccCCcceEEeeccC
Q psy5768 280 FIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQ---KGTINSVFFNGSNHRVLLERQG 356 (652)
Q Consensus 280 ~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~---~~~I~~~~~~g~~~~~i~~~~~ 356 (652)
+|+++....|+..++...... ..+........+..+++.+..+.|+++... ...|+.+++++.....+. ...
T Consensus 55 ~l~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ 129 (297)
T 2ojh_A 55 YLLLNSEGLLYRLSLAGDPSP----EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT-KNL 129 (297)
T ss_dssp EEEEEETTEEEEEESSSCCSC----EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC-SSS
T ss_pred EEEEEcCCeEEEEeCCCCCCc----eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee-cCC
Confidence 455555666777776320221 111111111334567888888888887732 467888887765544433 233
Q ss_pred ceeeeEEEccCCEEEEEeCCCC--eEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 357 SVEGLAYEYVHNYLYWTCNNDA--TINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 357 ~~~glAvDw~~~~LYwtd~~~~--~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
.+..+++.+.++.|+++....+ .|+.+++.+.. .. ........+..++++|...+|+++.......+|+...++
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~---~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV---ET-RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC---EE-ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCCc---ce-EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC
Confidence 4778889888999987765555 45555554321 22 112334677899999988888887643333578888777
Q ss_pred CCCceEEEEcCCCCCceEEEecCCCEEEEEeCC----------CCeEEEEecCCCceEEEe
Q psy5768 435 GFGTESIITTDITMPNALALDHQAEKLFWGDAR----------LDKIERCDYDGTNRIVLS 485 (652)
Q Consensus 435 G~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~----------~~~I~~~~ldG~~~~~l~ 485 (652)
+.....+.. .-.....+++++.+++|+++... ...|...++++...+.+.
T Consensus 206 ~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 206 GSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp SSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 765444332 12234578888889988887542 256888888876654443
No 178
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.86 E-value=0.021 Score=64.80 Aligned_cols=352 Identities=9% Similarity=0.013 Sum_probs=188.1
Q ss_pred eEEEEECCCCEEEEEeccCCcceEEEEEcCCCcc--EEEEeCCCc---------------CCccCCCCcEEEEccCCcEE
Q psy5768 41 SSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR--ETVVSQKKY---------------PAVTACNLHIAVDWIAQNIY 103 (652)
Q Consensus 41 ~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~--~~v~~~~~~---------------~~p~~~~~~lavDw~~~~lY 103 (652)
.++.+. +++++... . .+ | .+++..... +.+.....+ ..+. .+++... +.+.
T Consensus 29 ~~~~w~--g~~~~~~~--~-~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~----~~~~spd-~~~~ 96 (706)
T 2z3z_A 29 VGLQWM--GDNYVFIE--G-DD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSF----RTLDAGR-GLVV 96 (706)
T ss_dssp TTCEEE--TTEEEEEE--T-TE-E-EEEC-------CEEEEHHHHHTTC-----------CCCE----EEEETTT-TEEE
T ss_pred CCCcCc--CCeEEEEe--C-Cc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCce----eEEECCC-CeEE
Confidence 445566 55555555 2 23 7 777654433 444432112 3466 8888776 6666
Q ss_pred EEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCC-----CCcEEEEeecc----
Q psy5768 104 WSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-----KKQTILAQEII---- 174 (652)
Q Consensus 104 ~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg-----~~~~~~~~~~~---- 174 (652)
++. .+.|.+.++++.....+... -..+..+++.|...+|+++. ...|...++++ .....+.....
T Consensus 97 ~~~--~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~SpdG~~la~~~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (706)
T 2z3z_A 97 LFT--QGGLVGFDMLARKVTYLFDT-NEETASLDFSPVGDRVAYVR---NHNLYIARGGKLGEGMSRAIAVTIDGTETLV 170 (706)
T ss_dssp EEE--TTEEEEEETTTTEEEEEECC-TTCCTTCEECTTSSEEEEEE---TTEEEEEECBCTTSCCCCCEESCSCCBTTEE
T ss_pred EEE--CCEEEEEECCCCceEEccCC-cccccCCcCCCCCCEEEEEE---CCeEEEEecCcccccCCCcEEeccCCCCCeE
Confidence 664 38999999987655555443 34678899999777888764 35788888876 44443322221
Q ss_pred ----------cCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCC
Q psy5768 175 ----------MPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNN 244 (652)
Q Consensus 175 ----------~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~n 244 (652)
..+.+++..+.+++|++..++....+.+.. .......+ .+.-+
T Consensus 171 ~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~-----------~~~~~~~~-~~~~~--------------- 223 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPI-----------VDYHPLEA-ESKPL--------------- 223 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEE-----------EECCSSSC-EEEEE---------------
T ss_pred cccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEe-----------eccCCCCC-ceEEe---------------
Confidence 124788888888888886654332211110 00000000 00000
Q ss_pred CCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeee-ccccceEEEEEEEc
Q psy5768 245 GGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRN-STMMKNIIELSYDY 323 (652)
Q Consensus 245 g~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~-~~~~~~~~~v~~D~ 323 (652)
-|.. .|. . .....|+.+++..+ .. ..+.. ...-..+..+++.+
T Consensus 224 --------------------~y~~-~g~--~--------~~~~~l~~~d~~~~-~~----~~~~~~~~~~~~~~~~~~sp 267 (706)
T 2z3z_A 224 --------------------YYPM-AGT--P--------SHHVTVGIYHLATG-KT----VYLQTGEPKEKFLTNLSWSP 267 (706)
T ss_dssp --------------------CCCB-TTS--C--------CCEEEEEEEETTTT-EE----EECCCCSCTTCEEEEEEECT
T ss_pred --------------------eCCC-CCC--C--------CCeeEEEEEECCCC-ce----EeeccCCCCceeEeeEEEEC
Confidence 0000 000 0 00122333343111 10 01100 01113356788888
Q ss_pred CCCeEEEeeccc----ccEEEEeccCC-cceEEee-ccC----ceeeeEEEc--cCCEEEEEeC-CCCeEEEEEcCCCCC
Q psy5768 324 KRKTLFYSDIQK----GTINSVFFNGS-NHRVLLE-RQG----SVEGLAYEY--VHNYLYWTCN-NDATINKIDLDSPKA 390 (652)
Q Consensus 324 ~~~~lywsd~~~----~~I~~~~~~g~-~~~~i~~-~~~----~~~glAvDw--~~~~LYwtd~-~~~~I~~~~~~~~~~ 390 (652)
..+.|+++.... ..|+.+++.+. ..+.+.. ... .+.++++.+ .++.||.++. +...|+.++.++.
T Consensus 268 dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~-- 345 (706)
T 2z3z_A 268 DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR-- 345 (706)
T ss_dssp TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC--
T ss_pred CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC--
Confidence 888888864332 46788887655 4444442 111 135678877 6665554433 2346777765442
Q ss_pred ccEEEEEeCCCCCc-eE-EEEeCCCCEEEEEecCCC--CCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC
Q psy5768 391 QRIVVVRLGQHDKP-RG-IDIDSCDSRIYWTNWNSH--LPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA 466 (652)
Q Consensus 391 ~~~~~~~~~~~~~P-~~-Iavdp~~g~Lywtd~~~~--~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~ 466 (652)
... .+.....+ .+ ++++|..+.||++..... ...|++.++++...+.+. .......+++.+++++|.++-.
T Consensus 346 -~~~--~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~--~~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 346 -LIR--QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT--PESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp -EEE--ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC--CSSSEEEEEECTTSSEEEEEEE
T ss_pred -EEE--ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc--CCCceEEEEECCCCCEEEEEec
Confidence 122 22233333 34 799998889999876532 248888888776544432 2234567889888888877632
Q ss_pred C---CCeEEEEecCCCc
Q psy5768 467 R---LDKIERCDYDGTN 480 (652)
Q Consensus 467 ~---~~~I~~~~ldG~~ 480 (652)
. ...|+..++++..
T Consensus 421 ~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 421 SPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CSSCSCEEEEEESSSCE
T ss_pred CCCCCcEEEEEECCCCe
Confidence 2 2568889988765
No 179
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.84 E-value=0.017 Score=65.89 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=82.7
Q ss_pred ceeeeEEEccCCEEEEEeC----CCCeEEEEEcCCCCCccEEEEEeCCCC---CceEEEEeCCCCEEEEEecCCCCCceE
Q psy5768 357 SVEGLAYEYVHNYLYWTCN----NDATINKIDLDSPKAQRIVVVRLGQHD---KPRGIDIDSCDSRIYWTNWNSHLPSIQ 429 (652)
Q Consensus 357 ~~~glAvDw~~~~LYwtd~----~~~~I~~~~~~~~~~~~~~~~~~~~~~---~P~~Iavdp~~g~Lywtd~~~~~~~I~ 429 (652)
.+..+++ +.++.|+++.. ....|.++++.+.. ...++...... ...++++.|... ++++.......+|+
T Consensus 288 ~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 288 YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ--QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLY 363 (741)
T ss_dssp EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC--EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEE
T ss_pred EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc--eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEE
Confidence 5678899 89999988754 23467788875432 33333221111 335789999655 55554332234888
Q ss_pred EEeecCCCceEEEEcCCCCCceE-EEecCCCEEEEEeCC----CCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEE
Q psy5768 430 RAFFSGFGTESIITTDITMPNAL-ALDHQAEKLFWGDAR----LDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFI 502 (652)
Q Consensus 430 r~~ldG~~~~~l~~~~l~~P~gl-aiD~~~~~LYw~D~~----~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~l 502 (652)
+..++|. .+.+.. .-.....+ ++++.+++||++-.. .-.|+.++++|...+.+... ...+.+++. +.+|
T Consensus 364 ~~~~~~~-~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~--~~~~~~~~spdg~~l 439 (741)
T 2ecf_A 364 RIDSKGK-AAALTH-GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKA--PGMHSASFARNASVY 439 (741)
T ss_dssp EECSSSC-EEESCC-SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCS--CSEEEEEECTTSSEE
T ss_pred EEcCCCC-eeeeee-cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccC--CCceEEEECCCCCEE
Confidence 8888876 333322 21223355 589999999887543 34688998888766655441 233444443 3455
Q ss_pred EEE
Q psy5768 503 FWT 505 (652)
Q Consensus 503 Ywt 505 (652)
.++
T Consensus 440 ~~~ 442 (741)
T 2ecf_A 440 VDS 442 (741)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 180
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.82 E-value=0.035 Score=55.63 Aligned_cols=309 Identities=12% Similarity=0.066 Sum_probs=164.0
Q ss_pred CeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC
Q psy5768 39 KISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT 118 (652)
Q Consensus 39 ~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d 118 (652)
.+.++++.+.+..+.++. ....+................. -..+. .+++...++.|+.+. .+.|.+.+++
T Consensus 11 ~v~~~~~s~dg~~~~~~~---~~~~~~~~~~~~~~~~~~~~~h-~~~v~----~~~~~~~~~~l~~~~--dg~i~iw~~~ 80 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPF---PPDALIGPGIPRHARQINTLNH-GEVVC----AVTISNPTRHVYTGG--KGCVKVWDIS 80 (337)
T ss_dssp ECCEEEECSSSCEEECCC---CTTSSSSTTCCSEEEEEEEECC-SSCCC----EEEECSSSSEEEEEC--BSEEEEEETT
T ss_pred ceeEEEECCCCCEEEeec---CCCcEeccccCCccccceeccC-CCceE----EEEEecCCcEEEEcC--CCeEEEEECC
Confidence 567889998877776554 2222221111111111111223 34566 888887555555443 7889999886
Q ss_pred CCc----EEEEEe-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEE--EeecccCceeEEEeccCCEEEE
Q psy5768 119 GQY----RYVLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL--AQEIIMPIKDITLDLKFFSAFY 191 (652)
Q Consensus 119 g~~----~~~l~~-~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~--~~~~~~~p~gl~lD~~~~~ly~ 191 (652)
... ...+.. ........+++.|...+|+.... ...|...+++....... ..........+++.+.++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 158 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES--SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEE
Confidence 432 111111 23356788999996666665543 45788877776543222 2222345678888887777777
Q ss_pred EeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCC
Q psy5768 192 RNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDG 271 (652)
Q Consensus 192 ~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg 271 (652)
...+| ..+..-... ... +..+.. ..+....++.. + +
T Consensus 159 ~~~dg-~v~~~d~~~---~~~-------------~~~~~~-----------~~~~i~~~~~~---------~------~- 194 (337)
T 1gxr_A 159 CCSDG-NIAVWDLHN---QTL-------------VRQFQG-----------HTDGASCIDIS---------N------D- 194 (337)
T ss_dssp EETTS-CEEEEETTT---TEE-------------EEEECC-----------CSSCEEEEEEC---------T------T-
T ss_pred EeCCC-cEEEEeCCC---Cce-------------eeeeec-----------ccCceEEEEEC---------C------C-
Confidence 66663 332221110 000 001100 00000001110 0 1
Q ss_pred CcccccceEEEEee-ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceE
Q psy5768 272 KSCSEYDAFIMYSR-VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRV 350 (652)
Q Consensus 272 ~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~ 350 (652)
..+|+.+. ...|+..++... . +...+. ....+..++|.+..+.|+... ..+.|+..++.......
T Consensus 195 ------~~~l~~~~~dg~i~~~d~~~~-~---~~~~~~---~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 195 ------GTKLWTGGLDNTVRSWDLREG-R---QLQQHD---FTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp ------SSEEEEEETTSEEEEEETTTT-E---EEEEEE---CSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEE
T ss_pred ------CCEEEEEecCCcEEEEECCCC-c---eEeeec---CCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEE
Confidence 12233322 334555555211 1 111221 124467888888777666655 35778888877655444
Q ss_pred EeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecC
Q psy5768 351 LLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422 (652)
Q Consensus 351 i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~ 422 (652)
+......+.++++.+.++.|+.+ ...+.|.+.++.... .+........+.+++++|...+|+.+...
T Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 261 LHLHESCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGA----SIFQSKESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC----EEEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred EcCCccceeEEEECCCCCEEEEe-cCCCcEEEEECCCCe----EEEEecCCCcEEEEEECCCCCEEEEecCC
Confidence 43445578899999877766544 456889888876532 22333345778899999977777666543
No 181
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.71 E-value=0.01 Score=67.37 Aligned_cols=356 Identities=9% Similarity=0.005 Sum_probs=191.2
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcC--CccCCCCcEEEEccCCcEEEEeCC-------
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYP--AVTACNLHIAVDWIAQNIYWSDPK------- 108 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~--~p~~~~~~lavDw~~~~lY~~d~~------- 108 (652)
..+.++++.+.+..+| ++ ..+.|+.+++.+.....++...... .+. ++++...++.|.++...
T Consensus 17 ~~~~~~~~spdg~~~~-~~---~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~----~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIY-RE---QKGTVRLWNVETNTSTVLIEGKKIESLRAI----RYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp CCCCCCCBSSSSCBCC-CC---SSSCEEEBCGGGCCCEEEECTTTTTTTTCS----EEEECTTSSEEEEEESCCCCSSSC
T ss_pred ccccccEEcCCCcEEE-Ee---CCCCEEEEECCCCcEEEEeccccccccccc----eEEECCCCCEEEEEecCccceeec
Confidence 3567888988766554 33 4568999988766555655543111 366 89998878877776432
Q ss_pred -CCEEEEEEcCCCcEEEEEeCC--CCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecc-----------
Q psy5768 109 -ENVIEVARLTGQYRYVLISGG--VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEII----------- 174 (652)
Q Consensus 109 -~~~I~v~~~dg~~~~~l~~~~--~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~----------- 174 (652)
.+.|.+.++++...+.+.... ...+..+++.|...+|.++.. ..|...++++.....+....-
T Consensus 89 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~---~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE---NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDW 165 (723)
T ss_dssp CCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET---TEEEEESSSSSCCEEEECCCBTTTEEEEECCH
T ss_pred ceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC---CeEEEEECCCCceEEEecCCCCCceECcccce
Confidence 267888898876554443221 113678899997767877754 478888888766655543321
Q ss_pred -------cCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCC
Q psy5768 175 -------MPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGC 247 (652)
Q Consensus 175 -------~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~C 247 (652)
....+++..+.+++|++...+++..+...... ... . ..+-.
T Consensus 166 v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~-----------~~~-~--------------~~~~~------ 213 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPT-----------YTG-S--------------IYPTV------ 213 (723)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECC-----------CSS-S--------------SSCCC------
T ss_pred eEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeec-----------cCC-c--------------CCCcc------
Confidence 12367888888888887665544332221100 000 0 00000
Q ss_pred cccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeec----cccceEEEEEEEc
Q psy5768 248 AELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNS----TMMKNIIELSYDY 323 (652)
Q Consensus 248 s~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~----~~~~~~~~v~~D~ 323 (652)
.++. | ..+|.. . ....|+..++..+ ... ..+... .....+..+++.+
T Consensus 214 ~~~~--------------~-~~~G~~--~--------~~~~l~~~d~~~~-~~~---~~l~~~~~~~~~~~~~~~~~~Sp 264 (723)
T 1xfd_A 214 KPYH--------------Y-PKAGSE--N--------PSISLHVIGLNGP-THD---LEMMPPDDPRMREYYITMVKWAT 264 (723)
T ss_dssp EEEE--------------C-CBTTSC--C--------CEEEEEEEESSSS-CCC---EECCCCCCGGGSSEEEEEEEESS
T ss_pred eecc--------------C-CCCCCC--C--------CeeEEEEEECCCC-cee---EEeeCCccCCCccceeEEEEEeC
Confidence 0000 0 001210 0 0123333343111 100 111110 0123456778887
Q ss_pred CCCeEEEe-ec--ccccEEEEeccCCcceEEee-cc-Cc----eeeeEEEccCCEEEEE-eCCCC------eEEEEE-cC
Q psy5768 324 KRKTLFYS-DI--QKGTINSVFFNGSNHRVLLE-RQ-GS----VEGLAYEYVHNYLYWT-CNNDA------TINKID-LD 386 (652)
Q Consensus 324 ~~~~lyws-d~--~~~~I~~~~~~g~~~~~i~~-~~-~~----~~glAvDw~~~~LYwt-d~~~~------~I~~~~-~~ 386 (652)
..+.|+.. +. ....|+..++.+.....+.. .. .. +..+++.+.++.|+++ ....+ .|+.++ ..
T Consensus 265 Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~ 344 (723)
T 1xfd_A 265 STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQP 344 (723)
T ss_dssp SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSC
T ss_pred CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccC
Confidence 66666333 33 23467777876654444432 11 11 2478999889988886 44444 577776 33
Q ss_pred CCCCccEEEEEeCCCCCceE-EEEeCCCCEEEEEecCC--CCCceEEEeecCCCceEEEEcC---CCCCceEEEecCCCE
Q psy5768 387 SPKAQRIVVVRLGQHDKPRG-IDIDSCDSRIYWTNWNS--HLPSIQRAFFSGFGTESIITTD---ITMPNALALDHQAEK 460 (652)
Q Consensus 387 ~~~~~~~~~~~~~~~~~P~~-Iavdp~~g~Lywtd~~~--~~~~I~r~~ldG~~~~~l~~~~---l~~P~glaiD~~~~~ 460 (652)
+........+. ........ ++++|..++||++.... ...+|++..++|......+... -.....+++.+++++
T Consensus 345 ~~~~~~~~~l~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~ 423 (723)
T 1xfd_A 345 NSSNDNIQSIT-SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDF 423 (723)
T ss_dssp CSSSCCCCBSC-CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSE
T ss_pred CCCccceeEee-cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCE
Confidence 32100011111 11122233 68999999998876542 2347999888876332222221 223567888888887
Q ss_pred EEEEeC
Q psy5768 461 LFWGDA 466 (652)
Q Consensus 461 LYw~D~ 466 (652)
|.+.-.
T Consensus 424 l~~~~~ 429 (723)
T 1xfd_A 424 FLLKCE 429 (723)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 776533
No 182
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.69 E-value=1.8e-05 Score=57.88 Aligned_cols=40 Identities=25% Similarity=0.613 Sum_probs=34.2
Q ss_pred CCCCCCCC--------CCCCcccceecCCCceEEEeCCc-cccCCCccc
Q psy5768 236 GTNPCGVN--------NGGCAELCLYNGVSAVCACAHGV-VAQDGKSCS 275 (652)
Q Consensus 236 ~~n~C~~~--------ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~ 275 (652)
++++|... ++.|+|.|+..+++|+|.|+.|| +..|+++|.
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence 57889764 47899999999889999999999 567999996
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.66 E-value=0.033 Score=57.58 Aligned_cols=124 Identities=7% Similarity=-0.048 Sum_probs=71.8
Q ss_pred eEEEEEEEcCCCeEEEeecc--c--ccEEEEeccCCcceEEeeccCceeeeEEEc-cCCEEEEEeC--------------
Q psy5768 315 NIIELSYDYKRKTLFYSDIQ--K--GTINSVFFNGSNHRVLLERQGSVEGLAYEY-VHNYLYWTCN-------------- 375 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~--~--~~I~~~~~~g~~~~~i~~~~~~~~glAvDw-~~~~LYwtd~-------------- 375 (652)
.+..++|.+..++|+++... . +.|+.+++.+...+.+.. ..... +++.+ .++.|+.+..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCSEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCCCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 35567888877777776432 2 338888876554444332 11222 67766 6676655331
Q ss_pred -CCCeEEEEEcCCCCCccEEEEEeCCCC----------CceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE
Q psy5768 376 -NDATINKIDLDSPKAQRIVVVRLGQHD----------KPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT 443 (652)
Q Consensus 376 -~~~~I~~~~~~~~~~~~~~~~~~~~~~----------~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~ 443 (652)
....|.++++.+.. .+.+.. .... .+..+++.|...+|+++......+.|++..+++...+++..
T Consensus 317 ~~~~~i~~~d~~~~~--~~~l~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKS--AQKLCK-HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLEHH 392 (396)
T ss_dssp CCCCEEEEEETTTTB--CCEEEE-CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-----
T ss_pred CCCCcEEEEecccCc--eEEccC-CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccccc
Confidence 34678888876532 222222 1111 24567889987788887654445689999998887766543
No 184
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.50 E-value=0.35 Score=58.50 Aligned_cols=475 Identities=9% Similarity=0.015 Sum_probs=226.9
Q ss_pred CCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCcc
Q psy5768 9 TQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVT 87 (652)
Q Consensus 9 ~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~ 87 (652)
..+.|.+++.. ++...++.. .-..+.++++++.++.|.... ..+.|..+++........+... ...+.
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~~-------h~~~v~~~~~s~~~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~~-~~~v~ 703 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIKA-------HEDEVLCCAFSSDDSYIATCS---ADKKVKIWDSATGKLVHTYDEH-SEQVN 703 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEEEECC-SSCEE
T ss_pred CCCeEEEEECCCCCEEEEecc-------CCCCEEEEEEecCCCEEEEEe---CCCeEEEEECCCCceEEEEcCC-CCcEE
Confidence 55678888876 444444443 235789999999888887665 5678999988754333333444 44556
Q ss_pred CCCCcEEEEccCC-cEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCc
Q psy5768 88 ACNLHIAVDWIAQ-NIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166 (652)
Q Consensus 88 ~~~~~lavDw~~~-~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~ 166 (652)
.+++....+ .+..+-+..+.|.+.+++.......+.+.......+++.|...+|+-... .+.|..-++.....
T Consensus 704 ----~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~--dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 704 ----CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA--DGTLRLWDVRSANE 777 (1249)
T ss_dssp ----EEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES--SSEEEEEEGGGTEE
T ss_pred ----EEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC--CCeEEEEeCCCCcc
Confidence 777755433 45555556778999998766555444444467789999996555554432 34566655543322
Q ss_pred E-EEEeec------------ccCceeEEEeccCCEEEEE--------eCCCCcEEEEEe-cCCCCceEEEeecCCC----
Q psy5768 167 T-ILAQEI------------IMPIKDITLDLKFFSAFYR--------NLSKGNIHIISL-SNLSDVSTISMKPYGD---- 220 (652)
Q Consensus 167 ~-~~~~~~------------~~~p~gl~lD~~~~~ly~~--------d~~g~~~~~i~~-~~~~~~~~~~~~~~~~---- 220 (652)
. .+.... -..+..+++.+.+..|... +...+....... ........+...+...
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 857 (1249)
T 3sfz_A 778 RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI 857 (1249)
T ss_dssp EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEE
T ss_pred cceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEE
Confidence 1 111000 1134455666555555443 222222111111 0001111111111000
Q ss_pred -CCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEe-CCcccc-C---C--Cccc--c---------cceEE
Q psy5768 221 -SYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACA-HGVVAQ-D---G--KSCS--E---------YDAFI 281 (652)
Q Consensus 221 -~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~-~G~l~~-d---g--~~C~--~---------~~~~L 281 (652)
..-..|++|+..............+.-..++..+.+.+...+. .|.+.. + + .... . ....+
T Consensus 858 ~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1249)
T 3sfz_A 858 ALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMV 937 (1249)
T ss_dssp ECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEE
T ss_pred EeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEE
Confidence 0111244443321100000000000011111111111111111 111000 0 0 0000 0 00000
Q ss_pred EEe-eecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCcee
Q psy5768 282 MYS-RVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVE 359 (652)
Q Consensus 282 l~s-~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~ 359 (652)
+.. ....+..... . . . ..... ....+.++++.+..+.+..... .+.|...++......... .....+.
T Consensus 938 ~~~~~~~~~~~~~~-~--~-~-~~~~~----~~~~i~~~~~sp~g~~l~~g~~-~g~i~i~d~~~~~~~~~~~~h~~~v~ 1007 (1249)
T 3sfz_A 938 LAVDNIRGLQLIAG-K--T-G-QIDYL----PEAQVSCCCLSPHLEYVAFGDE-DGAIKIIELPNNRVFSSGVGHKKAVR 1007 (1249)
T ss_dssp EEEESSSSEEEEEE-S--S-C-CEEEE----CCSCEEEEEECTTSSEEEEEET-TSCCEEEETTTTSCEEECCCCSSCCC
T ss_pred EEecCCcceEEEec-C--c-c-eEEEc----ccCcEEEEEEcCCCCEEEEEcC-CCCEEEEEcCCCceeeecccCCCceE
Confidence 000 0111111111 0 0 0 00001 1134678888888777766654 477887776644333222 3445678
Q ss_pred eeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCce
Q psy5768 360 GLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTE 439 (652)
Q Consensus 360 glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~ 439 (652)
++++.+.++.|..+ +..+.|.+.++... ..+..........++++.| .+.++..... +.|...++......
T Consensus 1008 ~l~~s~dg~~l~s~-~~dg~i~vwd~~~~----~~~~~~~~~~~v~~~~~~~-~~~l~~~~~d---g~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1008 HIQFTADGKTLISS-SEDSVIQVWNWQTG----DYVFLQAHQETVKDFRLLQ-DSRLLSWSFD---GTVKVWNVITGRIE 1078 (1249)
T ss_dssp CEEECSSSSCEEEE-CSSSBEEEEETTTT----EEECCBCCSSCEEEEEECS-SSEEEEEESS---SEEEEEETTTTCCC
T ss_pred EEEECCCCCEEEEE-cCCCEEEEEECCCC----ceEEEecCCCcEEEEEEcC-CCcEEEEECC---CcEEEEECCCCcee
Confidence 89999887776644 55678888887642 2222234446778889988 4555444332 25666666444333
Q ss_pred EEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEc
Q psy5768 440 SIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANK 517 (652)
Q Consensus 440 ~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k 517 (652)
..+.........+++.+.+..|..+. ..+.|...+++.......+........++++. +.+|.... ..+.|..-+.
T Consensus 1079 ~~~~~~~~~v~~~~~s~d~~~l~s~s-~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~-~dg~i~vwd~ 1156 (1249)
T 3sfz_A 1079 RDFTCHQGTVLSCAISSDATKFSSTS-ADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGD-DNGEIRIWNV 1156 (1249)
T ss_dssp EEEECCSSCCCCEEECSSSSSCEEEC-CSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEE-TTSCCCEEES
T ss_pred EEEcccCCcEEEEEECCCCCEEEEEc-CCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEe-CCCEEEEEEC
Confidence 33333344567899998877766553 34567777776443222222222334667764 33444443 3444544455
Q ss_pred cCCc
Q psy5768 518 YTGE 521 (652)
Q Consensus 518 ~~g~ 521 (652)
.+|+
T Consensus 1157 ~~~~ 1160 (1249)
T 3sfz_A 1157 SDGQ 1160 (1249)
T ss_dssp SSSC
T ss_pred CCCc
Confidence 4444
No 185
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.013 Score=61.21 Aligned_cols=142 Identities=13% Similarity=0.035 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC----CccEEEEeCCCc
Q psy5768 8 PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG----TKRETVVSQKKY 83 (652)
Q Consensus 8 ~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg----s~~~~v~~~~~~ 83 (652)
...+.|++++++.......... ...-..+.++++++....|+... ..+.|+.++++. ......+... .
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~---~dg~v~vw~~~~~~~~~~~~~~~~~h-~ 113 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIAS----LQVDSKFNDLDWSHNNKIIAGAL---DNGSLELYSTNEANNAINSMARFSNH-S 113 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCC----CCCSSCEEEEEECSSSSCEEEEE---SSSCEEEECCSSTTSCCCEEEECCCS-S
T ss_pred CCCCeEEEEEccCCCCCcEEEE----EecCCceEEEEECCCCCeEEEEc---cCCeEEEeecccccccccchhhccCC-c
Confidence 3456788888775432111100 11235789999999888887665 457888888775 2122223333 4
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc------EEEEE---eCCCCCceeEEEcCCCCeEEEEecCCCC
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY------RYVLI---SGGVDQPSALAVDPESGYLFWSESGKIP 154 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~------~~~l~---~~~~~~P~~iavd~~~g~lywtd~~~~~ 154 (652)
..+. .+++....++++++-...+.|.+.++.... ..... .........+++.|..+.++.+-. ...
T Consensus 114 ~~v~----~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg 188 (416)
T 2pm9_A 114 SSVK----TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-SSN 188 (416)
T ss_dssp SCCC----EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-SSS
T ss_pred cceE----EEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc-CCC
Confidence 4566 888877646666666677888888886543 21111 112245677888876455555532 233
Q ss_pred eEEEEeCC
Q psy5768 155 LIARAGLD 162 (652)
Q Consensus 155 ~I~~~~ld 162 (652)
.|...++.
T Consensus 189 ~v~iwd~~ 196 (416)
T 2pm9_A 189 FASIWDLK 196 (416)
T ss_dssp CEEEEETT
T ss_pred CEEEEECC
Confidence 45554444
No 186
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.42 E-value=0.3 Score=55.89 Aligned_cols=359 Identities=11% Similarity=0.022 Sum_probs=190.6
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL 117 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~ 117 (652)
..+.+|+++|.+..|.... ..+.|..++.........+... -..+. ++++...++.|.... ..+.|.+.++
T Consensus 14 ~~v~~i~~sp~~~~la~~~---~~g~v~iwd~~~~~~~~~~~~~-~~~v~----~~~~s~~~~~l~~~~-~dg~i~vw~~ 84 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTL---YSGRVEIWNYETQVEVRSIQVT-ETPVR----AGKFIARKNWIIVGS-DDFRIRVFNY 84 (814)
T ss_dssp SCEEEEEECSSSSEEEEEE---TTSEEEEEETTTTEEEEEEECC-SSCEE----EEEEEGGGTEEEEEE-TTSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEe---CCCEEEEEECCCCceEEEEecC-CCcEE----EEEEeCCCCEEEEEe-CCCeEEEEEC
Confidence 5789999999988888776 5678888887654333333434 45567 889988666666554 4789999998
Q ss_pred CCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCC-cEEEEeecccCceeEEEec-cCCEEEEEeCC
Q psy5768 118 TGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILAQEIIMPIKDITLDL-KFFSAFYRNLS 195 (652)
Q Consensus 118 dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~-~~~~~~~~~~~p~gl~lD~-~~~~ly~~d~~ 195 (652)
+.......+.......+.++..|...+|+.... ...|...+++... ........-.....+++.+ .++.|+....+
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD--DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC--CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 755444444444567889999997667765543 4567777776542 2222222234567778877 34444444444
Q ss_pred CCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCccc
Q psy5768 196 KGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 196 g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
+..+..-......... +.... .++. ...+..|.
T Consensus 163 -g~v~vwd~~~~~~~~~--~~~~~------------------------~~~v---------~~~~~~~~----------- 195 (814)
T 3mkq_A 163 -RTVKVWSLGQSTPNFT--LTTGQ------------------------ERGV---------NYVDYYPL----------- 195 (814)
T ss_dssp -SEEEEEETTCSSCSEE--EECCC------------------------TTCC---------CEEEECCS-----------
T ss_pred -CeEEEEECCCCcceeE--EecCC------------------------CCCE---------EEEEEEEC-----------
Confidence 2222211111100000 00000 0000 00111110
Q ss_pred ccceEEEEee-ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-e
Q psy5768 276 EYDAFIMYSR-VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-E 353 (652)
Q Consensus 276 ~~~~~Ll~s~-~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~ 353 (652)
+...+|+.+. ...|+..++..+ .+...+. .+...+..+.|.+..+.|+... ..+.|...++........+ .
T Consensus 196 ~~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 196 PDKPYMITASDDLTIKIWDYQTK----SCVATLE--GHMSNVSFAVFHPTLPIIISGS-EDGTLKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp TTCCEEEEECTTSEEEEEETTTT----EEEEEEE--CCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTTCSEEEEECC
T ss_pred CCCCEEEEEeCCCEEEEEECCCC----cEEEEEc--CCCCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEEeec
Confidence 0112333332 233444454211 1112222 2234577888988766555444 4577888887653333222 4
Q ss_pred ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEE-ecCCCCCceEEEe
Q psy5768 354 RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT-NWNSHLPSIQRAF 432 (652)
Q Consensus 354 ~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywt-d~~~~~~~I~r~~ 432 (652)
....+..+++.+.++.+|.+-...+.+.+.++.. ....++++|. |.++|+ ........+....
T Consensus 269 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~ 332 (814)
T 3mkq_A 269 GLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN---------------DEPTLSLDPV-GKLVWSGGKNAAASDIFTAV 332 (814)
T ss_dssp SSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC---------------CSCCEEECSS-SEEEEECCTTSCTTCEEEEE
T ss_pred CCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC---------------CCceeEECCC-CCEEEECcccccceeeeeee
Confidence 4557888998888877666555555565555432 1234666774 444444 2222222344433
Q ss_pred ecCC-------Cce---EEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCC
Q psy5768 433 FSGF-------GTE---SIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGT 479 (652)
Q Consensus 433 ldG~-------~~~---~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~ 479 (652)
+.+. ... ......-..|..+++.+.++.|..+. .+.+...++...
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~--~~~~~i~~~~~~ 387 (814)
T 3mkq_A 333 IRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG--DGEYVIYTALAW 387 (814)
T ss_dssp CCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE--TTEEEEEETTTT
T ss_pred cccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec--CCEEEEEECccc
Confidence 3211 100 01111123578999998888777765 456666666543
No 187
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.33 E-value=0.004 Score=70.21 Aligned_cols=197 Identities=11% Similarity=0.033 Sum_probs=120.8
Q ss_pred cCCCe-EEEeecccccEEEEecc--C-CcceEEee-----ccCceeeeEEEccCCEEEEEeCCC---------CeEEEEE
Q psy5768 323 YKRKT-LFYSDIQKGTINSVFFN--G-SNHRVLLE-----RQGSVEGLAYEYVHNYLYWTCNND---------ATINKID 384 (652)
Q Consensus 323 ~~~~~-lywsd~~~~~I~~~~~~--g-~~~~~i~~-----~~~~~~glAvDw~~~~LYwtd~~~---------~~I~~~~ 384 (652)
+..++ |+++......|+.++++ | .....+.. ....+.++++.+.++.|+++.... .+|.+++
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 45666 77776656788888887 4 44444433 234677899999999999876431 4788888
Q ss_pred cCCCC----CccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC-----CCceEEEeecCC----CceEEEEcCCCCCce
Q psy5768 385 LDSPK----AQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH-----LPSIQRAFFSGF----GTESIITTDITMPNA 451 (652)
Q Consensus 385 ~~~~~----~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~-----~~~I~r~~ldG~----~~~~l~~~~l~~P~g 451 (652)
+++.. +..+.+. ........+++++|...+|+|+.+... ...|+...++++ ..+.+....-..+..
T Consensus 168 ~~~~~~~~~~~~~~l~-~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 168 LDGSAAADRSAVRELS-DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp TTSTTTTCGGGSEESS-CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred CCCCccccCCceeEEE-ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 87621 1122221 022345567889999889999876531 237999999853 333444322345677
Q ss_pred EEEecCCCEEEEEeCCCC--eEEEEecCCCceEEEecCC--CCc------eeEEEEe-CCEEEEEcC-CCCeEEEEEccC
Q psy5768 452 LALDHQAEKLFWGDARLD--KIERCDYDGTNRIVLSKIS--PLH------PFDMAVY-GEFIFWTDW-VIHAVLRANKYT 519 (652)
Q Consensus 452 laiD~~~~~LYw~D~~~~--~I~~~~ldG~~~~~l~~~~--~~~------p~glav~-~~~lYwtd~-~~~~I~~~~k~~ 519 (652)
++..++++ ||++....+ .|+.+++++...+.+.... ... ...+++. ++.++++-. ....|+.++..+
T Consensus 247 ~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 247 AEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp EEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred eEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 88888777 666544334 8999998766655554422 111 2356664 455554432 444677777654
Q ss_pred Cc
Q psy5768 520 GE 521 (652)
Q Consensus 520 g~ 521 (652)
+.
T Consensus 326 ~~ 327 (662)
T 3azo_A 326 GE 327 (662)
T ss_dssp TE
T ss_pred Cc
Confidence 43
No 188
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.30 E-value=0.17 Score=50.50 Aligned_cols=231 Identities=12% Similarity=0.050 Sum_probs=138.5
Q ss_pred EEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEE--e-eccC
Q psy5768 280 FIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVL--L-ERQG 356 (652)
Q Consensus 280 ~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i--~-~~~~ 356 (652)
+|+.+....|+..++..+ ....++..+....+-..+..++|.+..+.|+... ..+.|...+++....... . ....
T Consensus 65 ~l~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 142 (337)
T 1gxr_A 65 HVYTGGKGCVKVWDISHP-GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLAAPTPRIKAELTSSAP 142 (337)
T ss_dssp EEEEECBSEEEEEETTST-TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECCCC--EEEEEEECSSS
T ss_pred EEEEcCCCeEEEEECCCC-CceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCCcceeeecccCCC
Confidence 455555555665566222 2222223332212335578899998777666654 457788888776442222 2 3344
Q ss_pred ceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeC-CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecC
Q psy5768 357 SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLG-QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSG 435 (652)
Q Consensus 357 ~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~-~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG 435 (652)
.+..+++.+.++.|+... ..+.|.+.++... +.+.... ....+.+++++|...+|+..... +.|...++..
T Consensus 143 ~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~~~d~~~ 214 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCC-SDGNIAVWDLHNQ----TLVRQFQGHTDGASCIDISNDGTKLWTGGLD---NTVRSWDLRE 214 (337)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEeCCCC----ceeeeeecccCceEEEEECCCCCEEEEEecC---CcEEEEECCC
Confidence 678899988777776554 5678988887642 3333332 34678899999977677665533 3677666655
Q ss_pred CCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEE
Q psy5768 436 FGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLR 514 (652)
Q Consensus 436 ~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~ 514 (652)
........ .-..+..+++.+.++.|+.+. ..+.|...+++......+.. ....+.++++.. +.++.+-...+.|..
T Consensus 215 ~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 291 (337)
T 1gxr_A 215 GRQLQQHD-FTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHL-HESCVLSLKFAYCGKWFVSTGKDNLLNA 291 (337)
T ss_dssp TEEEEEEE-CSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceEeeec-CCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcC-CccceeEEEECCCCCEEEEecCCCcEEE
Confidence 43332222 223567899988888887765 45678889998876655433 235567777763 333344445667777
Q ss_pred EEccCCceE
Q psy5768 515 ANKYTGEEV 523 (652)
Q Consensus 515 ~~k~~g~~~ 523 (652)
.+..+++..
T Consensus 292 ~~~~~~~~~ 300 (337)
T 1gxr_A 292 WRTPYGASI 300 (337)
T ss_dssp EETTTCCEE
T ss_pred EECCCCeEE
Confidence 776666544
No 189
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.30 E-value=0.18 Score=57.08 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=81.6
Q ss_pred CCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCC------cceEEEEEcCCCccEEEEeCC-
Q psy5768 9 TQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ------VVTIEMAFMDGTKRETVVSQK- 81 (652)
Q Consensus 9 ~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~------~~~I~~~~~dgs~~~~v~~~~- 81 (652)
..+.|+++++.+.....+..... . ....+.+++++|..++|.++..... ...|+.+++++...+.+....
T Consensus 35 ~dg~i~~~d~~~g~~~~~~~~~~--~-~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 111 (723)
T 1xfd_A 35 QKGTVRLWNVETNTSTVLIEGKK--I-ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV 111 (723)
T ss_dssp SSSCEEEBCGGGCCCEEEECTTT--T-TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred CCCCEEEEECCCCcEEEEecccc--c-cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc
Confidence 45678888887655555553211 0 0014789999999998888751011 267888998876544442221
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCC------------------CCceeEEEcCCCC
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV------------------DQPSALAVDPESG 143 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~------------------~~P~~iavd~~~g 143 (652)
....+. .+++.+.++.|.++.. +.|.+.++++.....+..... ..+++++..|...
T Consensus 112 ~~~~~~----~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~ 185 (723)
T 1xfd_A 112 SNAKLQ----YAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT 185 (723)
T ss_dssp CSCCCS----BCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS
T ss_pred cccccc----ccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC
Confidence 011244 6777777777877764 688888887655444443321 1347899999766
Q ss_pred eEEEEec
Q psy5768 144 YLFWSES 150 (652)
Q Consensus 144 ~lywtd~ 150 (652)
+|+++..
T Consensus 186 ~la~~~~ 192 (723)
T 1xfd_A 186 RLAYAAI 192 (723)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7776643
No 190
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.27 E-value=0.33 Score=53.19 Aligned_cols=169 Identities=7% Similarity=-0.115 Sum_probs=100.8
Q ss_pred CCCCeEEEEecC-C--------CeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCc---ceEEEEEcCCCccE
Q psy5768 8 PTQSKIVVCNLE-G--------EYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQV---VTIEMAFMDGTKRE 75 (652)
Q Consensus 8 ~~~~~I~~~~~~-g--------~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~---~~I~~~~~dgs~~~ 75 (652)
...+.|.+++++ + +....+.. .-..+.++++++.+.+|+... ... ..|+.++ .+....
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~--~~~~~~~~v~~~d-~~~~~~ 154 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQV-------LAGPISDISWDFEGRRLCVVG--EGRDNFGVFISWD-SGNSLG 154 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEEC-------CSSCEEEEEECTTSSEEEEEE--CCSSCSEEEEETT-TCCEEE
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhc-------ccccEEEEEEeCCCCEEEEec--cCCCCccEEEEEE-CCCcce
Confidence 346778888884 2 33333332 235789999999988888776 332 4555554 233222
Q ss_pred EEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCC---CceeEEEcCC-CCeEEEEecC
Q psy5768 76 TVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVD---QPSALAVDPE-SGYLFWSESG 151 (652)
Q Consensus 76 ~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~---~P~~iavd~~-~g~lywtd~~ 151 (652)
.+... ...+. .+++...+..++.+-...+.|.+.++........+..... ....+++.|. ..+|+....
T Consensus 155 -~~~~~-~~~v~----~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~- 227 (615)
T 1pgu_A 155 -EVSGH-SQRIN----ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS- 227 (615)
T ss_dssp -ECCSC-SSCEE----EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-
T ss_pred -eeecC-CccEE----EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-
Confidence 22333 44566 8888776654666666788999998776544444443334 5789999997 444544432
Q ss_pred CCCeEEEEeCCCCCcEEEE-e---ecccCceeEEEeccCCEEEEEeCC
Q psy5768 152 KIPLIARAGLDGKKQTILA-Q---EIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 152 ~~~~I~~~~ldg~~~~~~~-~---~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
...|...++........+ . ..-.....+++. .+..|+....+
T Consensus 228 -dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 228 -DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp -TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred -CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 456777776544333333 2 223456778887 56666655554
No 191
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.22 E-value=0.00018 Score=52.38 Aligned_cols=33 Identities=27% Similarity=0.526 Sum_probs=28.3
Q ss_pred CCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 555 NGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 555 ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++.|.|.|+.+++ +|+|.|+.||.+..| ++|.+
T Consensus 19 ~~~C~~~C~n~~G-sy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 19 QPQCQHLCHNYVG-GYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SCTTSSEEEEETT-EEEEECSTTCEECTTSSCEEC
T ss_pred CCCCCCEeECCCC-CeEEECCCCCeECCCCCccCC
Confidence 3679999998876 699999999999888 88864
No 192
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.26 Score=50.93 Aligned_cols=75 Identities=9% Similarity=0.004 Sum_probs=51.0
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL 117 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~ 117 (652)
..+..+++++..+.|+... ..+.|..++.+|.....+ ... ...+. ++++...++.|+.+. ..+.|.+.++
T Consensus 109 ~~v~~~~~s~~~~~l~~~~---~dg~i~i~~~~~~~~~~~-~~~-~~~v~----~~~~~~~~~~l~~~~-~d~~i~iwd~ 178 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGV---ENGELRLWNKTGALLNVL-NFH-RAPIV----SVKWNKDGTHIISMD-VENVTILWNV 178 (425)
T ss_dssp BCEEEEEECTTSSEEEEEE---TTSCEEEEETTSCEEEEE-CCC-CSCEE----EEEECTTSSEEEEEE-TTCCEEEEET
T ss_pred CceEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCeeeec-cCC-CccEE----EEEECCCCCEEEEEe-cCCeEEEEEC
Confidence 3789999999888888766 557888888777655444 333 44566 788876555555544 4677888887
Q ss_pred CCCcE
Q psy5768 118 TGQYR 122 (652)
Q Consensus 118 dg~~~ 122 (652)
.....
T Consensus 179 ~~~~~ 183 (425)
T 1r5m_A 179 ISGTV 183 (425)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 64433
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.20 E-value=0.14 Score=58.19 Aligned_cols=210 Identities=10% Similarity=0.054 Sum_probs=128.0
Q ss_pred eEEEEEEEcCCCeEEEeecccc----cEEEEeccCCcceEE-eeccCceeeeEEEccCCEEEEEeCCC------------
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKG----TINSVFFNGSNHRVL-LERQGSVEGLAYEYVHNYLYWTCNND------------ 377 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~----~I~~~~~~g~~~~~i-~~~~~~~~glAvDw~~~~LYwtd~~~------------ 377 (652)
...++.+.+..++|.++....+ .|+..++.+...... .... ...+++..+.++.||++....
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 3567888888888877654332 688888876544332 2222 256788877889999886532
Q ss_pred ---CeEEEEEcCCCCCccEEEEEeCC-CCCceEEEEeCCCCEEEEEecCCC--CCceEEEeecC------C--CceEEEE
Q psy5768 378 ---ATINKIDLDSPKAQRIVVVRLGQ-HDKPRGIDIDSCDSRIYWTNWNSH--LPSIQRAFFSG------F--GTESIIT 443 (652)
Q Consensus 378 ---~~I~~~~~~~~~~~~~~~~~~~~-~~~P~~Iavdp~~g~Lywtd~~~~--~~~I~r~~ldG------~--~~~~l~~ 443 (652)
..|.+.++.+.......+..... .....++++.|..++|+++..... ...|+...+++ . ..+.|..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 24888887543211122222111 123468999999999988765221 34888888875 2 2334432
Q ss_pred cCCCCCceEEEecCCCEEEEEeCC---CCeEEEEecCCCc---eEEEecCCC-CceeEEEEe-CCEEEEEcCCCC--eEE
Q psy5768 444 TDITMPNALALDHQAEKLFWGDAR---LDKIERCDYDGTN---RIVLSKISP-LHPFDMAVY-GEFIFWTDWVIH--AVL 513 (652)
Q Consensus 444 ~~l~~P~glaiD~~~~~LYw~D~~---~~~I~~~~ldG~~---~~~l~~~~~-~~p~glav~-~~~lYwtd~~~~--~I~ 513 (652)
.. ....-.+++.+++||+.... ..+|..+++++.. .+.+..... ....++++. +++|+++-...+ .|+
T Consensus 285 -~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 285 -NF-EGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp -SS-SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred -CC-CcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 22 12223467778999988542 4579999998764 255544321 245567777 788888765443 577
Q ss_pred EEEccCCceEEEEe
Q psy5768 514 RANKYTGEEVYTLR 527 (652)
Q Consensus 514 ~~~k~~g~~~~~~~ 527 (652)
..+..+|+..+.+.
T Consensus 363 ~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 363 LHDLATGALLKIFP 376 (710)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCCEEEecC
Confidence 77765666544443
No 194
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.29 Score=50.51 Aligned_cols=334 Identities=11% Similarity=0.048 Sum_probs=172.0
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc----CCCc-------EEEEEeC---------CCCCceeEEEcCCCC
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL----TGQY-------RYVLISG---------GVDQPSALAVDPESG 143 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~----dg~~-------~~~l~~~---------~~~~P~~iavd~~~g 143 (652)
..+. .+++....+++.++-...+.|.+.++ .... ...+... .......+++.|...
T Consensus 46 ~~v~----~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 46 DNIV----SSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp SCCS----EEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred CceE----EEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 4566 88888766525555455788888887 5433 2222221 112678999999666
Q ss_pred eEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCc
Q psy5768 144 YLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYL 223 (652)
Q Consensus 144 ~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 223 (652)
+|+.... ...|...+.+|.....+.. .-.....+++.+.+..|+....+| ..+..-.... ..
T Consensus 122 ~l~~~~~--dg~i~i~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~---~~----------- 183 (425)
T 1r5m_A 122 SIVTGVE--NGELRLWNKTGALLNVLNF-HRAPIVSVKWNKDGTHIISMDVEN-VTILWNVISG---TV----------- 183 (425)
T ss_dssp EEEEEET--TSCEEEEETTSCEEEEECC-CCSCEEEEEECTTSSEEEEEETTC-CEEEEETTTT---EE-----------
T ss_pred EEEEEeC--CCeEEEEeCCCCeeeeccC-CCccEEEEEECCCCCEEEEEecCC-eEEEEECCCC---cE-----------
Confidence 6665543 3456666666654444332 234678899988888888777763 3332211111 10
Q ss_pred ceeeeeeeccCC--CCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCC
Q psy5768 224 KDIKIYSKDAQT--GTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLN 301 (652)
Q Consensus 224 ~~i~v~~~~~q~--~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~ 301 (652)
+..+...... ..+.......+....| .+..+ ...++..+....|+..++...
T Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-------------~~~~~~~~~~g~i~~~d~~~~---- 237 (425)
T 1r5m_A 184 --MQHFELKETGGSSINAENHSGDGSLGVD-------VEWVD-------------DDKFVIPGPKGAIFVYQITEK---- 237 (425)
T ss_dssp --EEEECCC---------------CCCBSC-------CEEEE-------------TTEEEEECGGGCEEEEETTCS----
T ss_pred --EEEeeccccCccceeeccccCCcceeeE-------EEEcC-------------CCEEEEEcCCCeEEEEEcCCC----
Confidence 0011000000 0000000000000000 00001 112333344556666666222
Q ss_pred CCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeE
Q psy5768 302 SPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATI 380 (652)
Q Consensus 302 ~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I 380 (652)
.++..+. .+...+..++|.+..+.|+... ..+.|...++........+ .....+..+++.+.+ ++++-...+.|
T Consensus 238 ~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i 312 (425)
T 1r5m_A 238 TPTGKLI--GHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSV 312 (425)
T ss_dssp SCSEEEC--CCSSCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEE
T ss_pred ceeeeec--cCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcE
Confidence 1222232 2234577899998777555554 4577888877654333333 344567888888766 55666677899
Q ss_pred EEEEcCCCCCccEEEEEe-CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCC--------------------ce
Q psy5768 381 NKIDLDSPKAQRIVVVRL-GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFG--------------------TE 439 (652)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~-~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~--------------------~~ 439 (652)
.+.++... +.+... .....+.+++++|...+|+..... +.|...++.... ..
T Consensus 313 ~i~d~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (425)
T 1r5m_A 313 RLWSLKQN----TLLALSIVDGVPIFAGRISQDGQKYAVAFMD---GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLY 385 (425)
T ss_dssp EEEETTTT----EEEEEEECTTCCEEEEEECTTSSEEEEEETT---SCEEEEECHHHHC--------------CEECCEE
T ss_pred EEEECCCC----cEeEecccCCccEEEEEEcCCCCEEEEEECC---CeEEEEECCCCccceeeeecccccccCcccchhh
Confidence 99987542 222222 334678899999977777666543 255555554322 11
Q ss_pred EEEEcCCC--CCceEEEecCCCEEEEEeCCCCeEEEEecCC
Q psy5768 440 SIITTDIT--MPNALALDHQAEKLFWGDARLDKIERCDYDG 478 (652)
Q Consensus 440 ~l~~~~l~--~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG 478 (652)
..+..... .+..+++.+.++.|+.+. ..+.|...+++|
T Consensus 386 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~g 425 (425)
T 1r5m_A 386 ASYQSSQDNDYIFDLSWNCAGNKISVAY-SLQEGSVVAIPG 425 (425)
T ss_dssp EEECCTTCCCCEEEEEECTTSSEEEEEE-SSSCCEEEECCC
T ss_pred hhhcCcccCCceEEEEccCCCceEEEEe-cCceEEEEeecC
Confidence 11111111 556778877777666554 334566666654
No 195
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.16 E-value=0.12 Score=53.93 Aligned_cols=176 Identities=10% Similarity=-0.068 Sum_probs=116.6
Q ss_pred EEecCCCCeEEEEecC-CC-eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 4 AVSSPTQSKIVVCNLE-GE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
+++....+.|.++++. +. ....+.. .-..+.++++++.+..|+... ..+.|..+++........+...
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~~~~~~~~~~~ 258 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQG-------HSSEVCGLAWRSDGLQLASGG---NDNVVQIWDARSSIPKFTKTNH 258 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC-------CSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTCSSEEEEECCC
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcC-------CCCCeeEEEEcCCCCEEEEEe---CCCeEEEccCCCCCccEEecCC
Confidence 4444567888899887 33 3334433 235789999999777777665 5678988988754433333444
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeC--CCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDP--KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 159 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~--~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~ 159 (652)
...+. .+++...+.+++.+-+ ..+.|.+.++........+.. -.....++..|...+|+.+.....+.|...
T Consensus 259 -~~~v~----~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 259 -NAAVK----AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQVTSLIWSPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp -SSCCC----EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEECSSSSEEEEEECTTTCEEEEE
T ss_pred -cceEE----EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEEECCCCCeEEEEeecCCCcEEEE
Confidence 45567 8888877778888754 578999999875544444443 357889999997777766543345677777
Q ss_pred eCCCCCcEEEE--eecccCceeEEEeccCCEEEEEeCC
Q psy5768 160 GLDGKKQTILA--QEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 160 ~ldg~~~~~~~--~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
++......... ...-.....+++++.+..|+....|
T Consensus 333 ~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 333 SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT
T ss_pred ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC
Confidence 76654333222 2223467788888877777766666
No 196
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.09 E-value=0.00013 Score=73.69 Aligned_cols=43 Identities=35% Similarity=0.772 Sum_probs=36.9
Q ss_pred CCCCCCC-CCCCcccceecCCCceEEEeCCc-cccCCCcccccce
Q psy5768 237 TNPCGVN-NGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYDA 279 (652)
Q Consensus 237 ~n~C~~~-ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~~~ 279 (652)
.|||..+ ||+|+|.|.....+|+|.|+.|| |..|+++|.+.++
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~ 46 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQ 46 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECST
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccc
Confidence 5899988 99999999988889999999998 6679999986443
No 197
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.06 E-value=0.028 Score=62.22 Aligned_cols=195 Identities=10% Similarity=0.007 Sum_probs=120.1
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeecc-CceeeeEEEccCCEEEEEeC--CC--CeEEEEEc--CCC
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCN--ND--ATINKIDL--DSP 388 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~-~~~~glAvDw~~~~LYwtd~--~~--~~I~~~~~--~~~ 388 (652)
+.++++.+..++|.++....+++....++|.....+...- ..+.++++.+. +.||+++. .. ..|+.+++ ++.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 5678888888888887654455444445665544444222 34556666544 67888875 22 36777777 543
Q ss_pred CCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCC-
Q psy5768 389 KAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDAR- 467 (652)
Q Consensus 389 ~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~- 467 (652)
. . .+.........++.|....++++..... .+...++++...+.+..... ..+++++++++|+++...
T Consensus 103 ~---~---~l~~~~~~~~~~~s~dg~~~~~~s~~~~--~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 103 E---Q---RLEAVKPMRILSGVDTGEAVVFTGATED--RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp C---E---ECTTSCSBEEEEEEECSSCEEEEEECSS--CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEE
T ss_pred c---c---cccCCCCceeeeeCCCCCeEEEEecCCC--CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcC
Confidence 2 2 2234445566777776655555543333 33345777766555554332 788999999999976432
Q ss_pred --CCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCC-CeEEEEEccCCceE
Q psy5768 468 --LDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVI-HAVLRANKYTGEEV 523 (652)
Q Consensus 468 --~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~-~~I~~~~k~~g~~~ 523 (652)
...|+.+++++...+.+.... ....++++. +.+|+.++... ..|+..+..+|+..
T Consensus 172 ~~~~~i~~~d~~~g~~~~l~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLRVFDSGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp TTEEEEEEEETTTCCCEEECCSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCeEEEEEcCCCCCceEeecCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 256999999887777665432 445667765 55788555432 27888888777655
No 198
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.00 E-value=0.59 Score=51.13 Aligned_cols=173 Identities=9% Similarity=-0.041 Sum_probs=101.2
Q ss_pred EEEecCCCCeEEEEecCC-----CeeEEEecCCCCCCCCCCC-eeEEEEEC--CCCEEEEEeccCCcceEEEEEcC-C--
Q psy5768 3 IAVSSPTQSKIVVCNLEG-----EYQTTILSNESNDTSTLSK-ISSIAVWP--VKGKMFWSNVTKQVVTIEMAFMD-G-- 71 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g-----~~~~~~~~~~~~~~~~~~~-~~~v~~d~--~~~~lyw~d~~~~~~~I~~~~~d-g-- 71 (652)
|++++ ++.|.+++++. +....+... -.. +.+++++| ....|+... ..+.|..+++. |
T Consensus 33 l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h-------~~~~v~~~~~sp~~~~~~l~s~~---~dg~v~vw~~~~~~~ 100 (615)
T 1pgu_A 33 IAYPC--GKSAFVRCLDDGDSKVPPVVQFTGH-------GSSVVTTVKFSPIKGSQYLCSGD---ESGKVIVWGWTFDKE 100 (615)
T ss_dssp EEEEE--TTEEEEEECCSSCCSSCSEEEECTT-------TTSCEEEEEECSSTTCCEEEEEE---TTSEEEEEEEEEEGG
T ss_pred EEEec--CCeEEEEECCCCCCccccceEEecC-------CCceEEEEEECcCCCCCEEEEec---CCCEEEEEeCCCCcc
Confidence 45554 67888998874 345555432 245 89999999 777777665 46778887774 2
Q ss_pred ----C-ccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCC---CEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCC
Q psy5768 72 ----T-KRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKE---NVIEVARLTGQYRYVLISGGVDQPSALAVDPESG 143 (652)
Q Consensus 72 ----s-~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~---~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g 143 (652)
. .....+... ...+. .+++...++.|+.+.... +.|.+.+ .++.. ..+.........+++.|...
T Consensus 101 ~~~~~~~~~~~~~~~-~~~v~----~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~-~~~~~~~~~v~~~~~~~~~~ 173 (615)
T 1pgu_A 101 SNSVEVNVKSEFQVL-AGPIS----DISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSL-GEVSGHSQRINACHLKQSRP 173 (615)
T ss_dssp GTEEEEEEEEEEECC-SSCEE----EEEECTTSSEEEEEECCSSCSEEEEETT-TCCEE-EECCSCSSCEEEEEECSSSS
T ss_pred cccccccccchhhcc-cccEE----EEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcc-eeeecCCccEEEEEECCCCC
Confidence 1 111122323 34566 888887776676665432 3555554 23322 22333345678899998665
Q ss_pred eEEEEecCCCCeEEEEeCCCCCcEEEEeeccc---CceeEEEecc-CCEEEEEeCC
Q psy5768 144 YLFWSESGKIPLIARAGLDGKKQTILAQEIIM---PIKDITLDLK-FFSAFYRNLS 195 (652)
Q Consensus 144 ~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~---~p~gl~lD~~-~~~ly~~d~~ 195 (652)
+++.+-. ....|...++........+...-. ....+++.+. +..|+....+
T Consensus 174 ~~l~~~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 174 MRSMTVG-DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp CEEEEEE-TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred cEEEEEe-CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence 4555433 245666666553332222222223 5678888887 6666666665
No 199
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.98 E-value=0.44 Score=49.41 Aligned_cols=203 Identities=9% Similarity=-0.036 Sum_probs=126.4
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCc--------ceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEE
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN--------HRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKID 384 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~--------~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~ 384 (652)
...+.+++|.+.++.++.+-...+.|...++.... ...+......+..|++.+.+++++++-...+.|.+.+
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 35678999998555555555556788888876431 2233334457889999988766777777778899888
Q ss_pred cCCCCCccEEEEEe---CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE-EcC-CCCCceEEEecCCC
Q psy5768 385 LDSPKAQRIVVVRL---GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII-TTD-ITMPNALALDHQAE 459 (652)
Q Consensus 385 ~~~~~~~~~~~~~~---~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~-~~~-l~~P~glaiD~~~~ 459 (652)
+... +.+..+ .......+|+++|...+|+.+... ..|...++........+ ... -..+..+++.+.+.
T Consensus 161 ~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 161 VGTG----AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD---KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp TTTT----EEEEEECTTTCCSCEEEEEECTTSSCEEEEETT---SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CCCC----CccEEEecCCCCCceEEEEECCCCCEEEEEecC---CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 8642 333333 234667899999976666665543 36666666543322222 111 12367888887655
Q ss_pred EEEEEe--CCCCeEEEEecCCCce--EEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCce
Q psy5768 460 KLFWGD--ARLDKIERCDYDGTNR--IVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEE 522 (652)
Q Consensus 460 ~LYw~D--~~~~~I~~~~ldG~~~--~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~ 522 (652)
.|+.+- ...+.|...++..... ..........+..+++. +.+||.+....+.|...+..+++.
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 444432 4567888888876432 22221222456777776 458888877777787777766653
No 200
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.97 E-value=0.23 Score=51.10 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=69.2
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccE
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRI 393 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~ 393 (652)
.+.+++|.+..+.++.+-...+.|...++........+ .....+..|++.+.++++..+-+..++|.+-++.. .+
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~----~~ 303 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF----SE 303 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS----CE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC----Cc
Confidence 35678888877777776656677887776544333333 34456788999887777666666678888888754 23
Q ss_pred EEEEeCCCCCceEEEEeCCCCEEEEEec
Q psy5768 394 VVVRLGQHDKPRGIDIDSCDSRIYWTNW 421 (652)
Q Consensus 394 ~~~~~~~~~~P~~Iavdp~~g~Lywtd~ 421 (652)
.+..........+|+.+|..+.++.|-.
T Consensus 304 ~~~~~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 304 VFRDLSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp EEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EeEECCCCCCEEEEEEeCCCCCEEEEEc
Confidence 3333344567789999997676666543
No 201
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.97 E-value=0.011 Score=65.38 Aligned_cols=186 Identities=10% Similarity=-0.012 Sum_probs=113.8
Q ss_pred EEEEEEEcCCCeEEEeec----ccccEEEEec--cCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCC
Q psy5768 316 IIELSYDYKRKTLFYSDI----QKGTINSVFF--NGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPK 389 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~----~~~~I~~~~~--~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~ 389 (652)
+.++++.+. +.+|+++. ....|+.+++ +|... . +........+++.+.++.++++....+.+...++.+..
T Consensus 67 ~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~-l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~ 143 (582)
T 3o4h_A 67 VLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-R-LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG 143 (582)
T ss_dssp ECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-E-CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE
T ss_pred cccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-c-ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc
Confidence 455666655 67787775 2236788888 66543 2 22222344567777787777776655655566765432
Q ss_pred CccEEEEEeCCCCCceEEEEeCCCCEEEEEecCC-CCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCC
Q psy5768 390 AQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNS-HLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARL 468 (652)
Q Consensus 390 ~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~-~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~ 468 (652)
.+.+..... .+++++|...+|+++.... ....|++.++++...+.|.. .......+++.+++++|+..+...
T Consensus 144 --~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~-~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 144 --LRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS-GEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp --EEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC-SSCEEEEEEECTTSCEEEEEECSS
T ss_pred --EEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec-CCCccccceECCCCCEEEEccCCC
Confidence 233332221 7899999888888765432 12479999988777665543 334457899999999999555432
Q ss_pred -CeEEEEecCCCceEEEecCCCCceeEEE--------Ee-CCEEEEEcCCCCeE
Q psy5768 469 -DKIERCDYDGTNRIVLSKISPLHPFDMA--------VY-GEFIFWTDWVIHAV 512 (652)
Q Consensus 469 -~~I~~~~ldG~~~~~l~~~~~~~p~gla--------v~-~~~lYwtd~~~~~I 512 (652)
..|..+++++...+ ++......+.+++ +. ++.+|++-...+.+
T Consensus 217 ~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 217 EARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp CEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred eeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 38999999988777 4443222233333 43 23666655444443
No 202
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.059 Score=56.02 Aligned_cols=211 Identities=9% Similarity=0.027 Sum_probs=122.7
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccC----CcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNG----SNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSP 388 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g----~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~ 388 (652)
..+.+++|.+..+.|+.... .+.|...++.. ......+ .....+..|++.+.+++++.+-...+.|.+.++...
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~-dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALD-NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SCEEEEEECSSSSCEEEEES-SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CceEEEEECCCCCeEEEEcc-CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 45788999887766665543 57787777765 1111222 344567889998875556666677788888887653
Q ss_pred CCcc---EEEEE---eCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcC------CCCCceEEEec
Q psy5768 389 KAQR---IVVVR---LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD------ITMPNALALDH 456 (652)
Q Consensus 389 ~~~~---~~~~~---~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~------l~~P~glaiD~ 456 (652)
.... ..... ........+|+++|..+.++.+-... +.|...++........+... -..+..+++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS--NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS--SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC--CCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 2000 11110 12335678999999756666664332 36666666554332222221 23467899998
Q ss_pred CCCEEEEEeCCCC---eEEEEecCCC-ceEEEec-CCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 457 QAEKLFWGDARLD---KIERCDYDGT-NRIVLSK-ISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 457 ~~~~LYw~D~~~~---~I~~~~ldG~-~~~~l~~-~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.+..++.+-...+ .|...++... .....+. .....+.++++. ++.++.+-...+.|...+..+++....+.
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 8755555444444 7888888753 2222222 223456777774 34444554556677777766666555554
No 203
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.93 E-value=0.00045 Score=69.66 Aligned_cols=40 Identities=28% Similarity=0.591 Sum_probs=35.2
Q ss_pred CCCCCCC-CCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 548 KTPCRHL-NGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 548 ~~~C~~~-ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
.|+|..+ ||+|+|.|...++ +++|.|+.||.|..| ++|.+
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~-~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQE-SYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTT-SCCCBCCTTEEECTTSSCEEE
T ss_pred CCccCCCCCCCCCCEeeCCCC-CeEecCCCCcccCCCCCcccc
Confidence 4789888 8999999998765 699999999999999 89986
No 204
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.90 E-value=0.48 Score=48.47 Aligned_cols=195 Identities=9% Similarity=-0.051 Sum_probs=113.6
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ 391 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~ 391 (652)
-..+.+++|.+..+.|.-. ...+.|...++........+ .....+..+++.+.+..++.+-+..++|.+-++.....
T Consensus 127 ~~~V~~v~~spdg~~l~sg-s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~- 204 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSG-SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP- 204 (344)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-
T ss_pred CCCEEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce-
Confidence 3457889998876655544 44577888887654332223 33457888999888888888888788898888754321
Q ss_pred cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 392 ~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
...+........+.+++.+|..+.++.+-... +.|...++........+...-...+.|++.+.+.++..+-...+.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d--g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN--GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETT--SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccC--CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 12221112334678999999888777764332 2555555543332222222233557888887776655444445667
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeE
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAV 512 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I 512 (652)
...|+.......+ ........+|++. +.+|+.+-...+.|
T Consensus 283 ~vwd~~~~~~~~~-~~H~~~V~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 283 AVLDSSLSELFRS-QAHRDFVRDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp EEECTTCCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred EEEECCCCcEEEE-cCCCCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence 7777765543332 2222345677764 34555554444444
No 205
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.90 E-value=0.38 Score=48.54 Aligned_cols=173 Identities=9% Similarity=-0.049 Sum_probs=106.9
Q ss_pred EecCCCCeEEEEecCCCee-EEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCc
Q psy5768 5 VSSPTQSKIVVCNLEGEYQ-TTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY 83 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~ 83 (652)
++....+.|.+++++.... ..+.. .-..+.+++++|..+.|.... ..+.|..+++........+... .
T Consensus 138 ~~g~~dg~v~i~~~~~~~~~~~~~~-------~~~~v~~~~~spdg~~lasg~---~dg~i~iwd~~~~~~~~~~~~h-~ 206 (321)
T 3ow8_A 138 ATGTHVGKVNIFGVESGKKEYSLDT-------RGKFILSIAYSPDGKYLASGA---IDGIINIFDIATGKLLHTLEGH-A 206 (321)
T ss_dssp EEECTTSEEEEEETTTCSEEEEEEC-------SSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCC-S
T ss_pred EEEcCCCcEEEEEcCCCceeEEecC-------CCceEEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEccc-C
Confidence 3344567777887764433 33332 224688999999888887665 5678888887654333333333 3
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCC
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 163 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg 163 (652)
..+. .+++.+.+ ++..+-+..+.|.+.++........+.+-......+++.|...+|+-+. ....|..-++..
T Consensus 207 ~~v~----~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s--~D~~v~iwd~~~ 279 (321)
T 3ow8_A 207 MPIR----SLTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS--SDKSVKVWDVGT 279 (321)
T ss_dssp SCCC----EEEECTTS-CEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTT
T ss_pred Ccee----EEEEcCCC-CEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe--CCCcEEEEeCCC
Confidence 4567 88888744 4555555678899999876554444444445678899999655555443 244666666653
Q ss_pred CCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 164 KKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 164 ~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
......+..--....++++.+.+.+|.-...|
T Consensus 280 ~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 280 RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 33222222223456788888877777666666
No 206
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=96.88 E-value=0.00053 Score=80.35 Aligned_cols=37 Identities=35% Similarity=0.832 Sum_probs=32.8
Q ss_pred ccCCCceeeccCeecCCccCCCCCCCCCCCCCCCCCCCCC
Q psy5768 592 VCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAM 631 (652)
Q Consensus 592 ~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~ 631 (652)
.|. .+|+|.+|+||+..|.|||++||.|+|||.. |..
T Consensus 118 ~C~-~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~--C~~ 154 (913)
T 3t5o_A 118 DCK-NKFRCDSGRCIARKLECNGENDCGDNSDERD--CGR 154 (913)
T ss_dssp CCS-SEEECTTSCEEEGGGSSSSSCCSSSSGGGTT--CSS
T ss_pred Ccc-cccccCCCceEccceecCCcccCCCcccccc--CCC
Confidence 353 6799999999999999999999999999986 754
No 207
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.88 E-value=0.00028 Score=59.83 Aligned_cols=45 Identities=33% Similarity=0.697 Sum_probs=37.2
Q ss_pred CCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccce
Q psy5768 235 TGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDA 279 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~ 279 (652)
.++|||..+|++|++.|+..+.+|+|.|+.||...+++.|.+.++
T Consensus 27 Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dide 71 (107)
T 2w2n_E 27 MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDE 71 (107)
T ss_dssp BSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEEC---
T ss_pred CcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccccccc
Confidence 578999988899999999888899999999997667888875433
No 208
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.86 E-value=0.16 Score=53.67 Aligned_cols=203 Identities=9% Similarity=0.028 Sum_probs=125.7
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccC-----------CcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEE
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNG-----------SNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINK 382 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g-----------~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~ 382 (652)
..+..++|.+.++.++.+-...+.|+..++.. .....+......+.+|++++.+..++.+-...+.|.+
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 208 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICL 208 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEE
Confidence 34556777776566776666667787777653 1112222334467888888877756667777889999
Q ss_pred EEcCCCCCc-cE---EEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCC---CceEEEEcCCCCCceEEEe
Q psy5768 383 IDLDSPKAQ-RI---VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF---GTESIITTDITMPNALALD 455 (652)
Q Consensus 383 ~~~~~~~~~-~~---~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~---~~~~l~~~~l~~P~glaiD 455 (652)
.++...... .. ............+|+.+|..+.++.+..... .|...++... .....+...-..++.|++.
T Consensus 209 wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 209 WDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ--KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp EETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS--EEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred EeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC--eEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence 888652211 11 1111134456889999997788888765543 6666666533 1222222233457899999
Q ss_pred cCCCEEEEEeCCCCeEEEEecCC-Cc-eEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccC
Q psy5768 456 HQAEKLFWGDARLDKIERCDYDG-TN-RIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 456 ~~~~~LYw~D~~~~~I~~~~ldG-~~-~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~ 519 (652)
+.++.++.+-...+.|...++.. .. ...+ ........+|++. +.+++.+-...+.|...+...
T Consensus 287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 287 PYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 88887887766778899999875 22 2333 2223456777775 346777766666666555543
No 209
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.84 E-value=0.023 Score=58.80 Aligned_cols=181 Identities=8% Similarity=-0.024 Sum_probs=100.3
Q ss_pred ccEEEEeccCCcceEEeeccCceeeeEEEc-cCCEEEEEeCCC-----CeEEEEEcCCCCCccEEEEEeCCCCCceEEEE
Q psy5768 336 GTINSVFFNGSNHRVLLERQGSVEGLAYEY-VHNYLYWTCNND-----ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDI 409 (652)
Q Consensus 336 ~~I~~~~~~g~~~~~i~~~~~~~~glAvDw-~~~~LYwtd~~~-----~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iav 409 (652)
..|+.+++.+...+.+......+..+++.+ .++.|+++.... .+|+++++++.. .+.+........+..+++
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFW 245 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEE
Confidence 345555544433333333444567778877 566677664332 478888886532 222221001224667899
Q ss_pred eCCCCEEEEEecCCCCCc--eEEEeecCCCceEEEEcCCCCCceEEEec-CCCEEEEEe---------------CCCCeE
Q psy5768 410 DSCDSRIYWTNWNSHLPS--IQRAFFSGFGTESIITTDITMPNALALDH-QAEKLFWGD---------------ARLDKI 471 (652)
Q Consensus 410 dp~~g~Lywtd~~~~~~~--I~r~~ldG~~~~~l~~~~l~~P~glaiD~-~~~~LYw~D---------------~~~~~I 471 (652)
.|...+|+++........ |+..++++...+.+.... .. .+++.+ +++.|+.+. .....|
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i 322 (396)
T 3c5m_A 246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PC-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFL 322 (396)
T ss_dssp CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SE-EEEEECSSSSEEEEEECCC----------CCCCCCEE
T ss_pred CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CC-CCCccCCCCceEEEecCCcceeeccccccccCCCCcE
Confidence 998887777643322235 888888766555544322 11 266776 666555432 134679
Q ss_pred EEEecCCCceEEEecCCCC----------ceeEEEE--eCCEEEEEcCC--CCeEEEEEccCCc
Q psy5768 472 ERCDYDGTNRIVLSKISPL----------HPFDMAV--YGEFIFWTDWV--IHAVLRANKYTGE 521 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~----------~p~glav--~~~~lYwtd~~--~~~I~~~~k~~g~ 521 (652)
+.+++++...+.+...... .+..+++ ++.+|+++... ...|++++..++.
T Consensus 323 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 323 YVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp EEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred EEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 9999987665555442210 1223344 35578776543 3357777765544
No 210
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.81 E-value=0.38 Score=49.35 Aligned_cols=203 Identities=8% Similarity=-0.002 Sum_probs=125.2
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee---ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE---RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~---~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
..+.+++|.+....++.+-...+.|...++.+......+. ....+.+|++.+..+++..+-...+.|.+.++.+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-- 151 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-- 151 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC--
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC--
Confidence 4567888988774555555556888888887655444442 34567888888745555566667788998898752
Q ss_pred ccEEEEEeCC--CCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCC
Q psy5768 391 QRIVVVRLGQ--HDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARL 468 (652)
Q Consensus 391 ~~~~~~~~~~--~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~ 468 (652)
....+.... .....+++++|...+|+..... +.|...++++.....+.. .-.....+++.+.++.++.+-...
T Consensus 152 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 152 -VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLDGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp -EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETTSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEETT
T ss_pred -ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECCCCEEEEecc-CCCcEEEEEECCCCCCEEEEEeCC
Confidence 222222111 2457899999987777666543 367777776554433332 234567899998877455554556
Q ss_pred CeEEEEecCC----CceEEEecCCCCceeEEEEeC---CEEEEEcCCCCeEEEEEccCCceEEE
Q psy5768 469 DKIERCDYDG----TNRIVLSKISPLHPFDMAVYG---EFIFWTDWVIHAVLRANKYTGEEVYT 525 (652)
Q Consensus 469 ~~I~~~~ldG----~~~~~l~~~~~~~p~glav~~---~~lYwtd~~~~~I~~~~k~~g~~~~~ 525 (652)
+.|...++.. ........ ......++++.. .+|+.. ...+.|...+..+++....
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAEMP-HEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEEEE-CSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTBTTSCSE
T ss_pred CEEEEEeCCCCCcccceEEEec-CCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCCCccccc
Confidence 7788888864 22222222 234567787754 344444 4556777777666654333
No 211
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.81 E-value=0.3 Score=49.30 Aligned_cols=175 Identities=13% Similarity=0.048 Sum_probs=107.4
Q ss_pred EEEecCCCCeEEEEecCCC-eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 3 IAVSSPTQSKIVVCNLEGE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
++++....+.|+++|++.. ....+.. .-..+..++++|..++|.... ..+.|..+++........+...
T Consensus 94 ~l~s~s~D~~i~lWd~~~~~~~~~~~~-------~~~~~~~~~~spdg~~l~~g~---~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENGKQIKSIDA-------GPVDAWTLAFSPDSQYLATGT---HVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEC-------CTTCCCCEEECTTSSEEEEEC---TTSEEEEEETTTCSEEEEEECS
T ss_pred EEEEEeCCCcEEEEECCCCCEEEEEeC-------CCccEEEEEECCCCCEEEEEc---CCCcEEEEEcCCCceeEEecCC
Confidence 3455556788899998744 4444433 123567899999887777554 6678888888755443333433
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
-..+. .+++.+.++.| .+-...+.|.+.++........+..-....+.+++.|...+|+-.. ....|..-++
T Consensus 164 -~~~v~----~~~~spdg~~l-asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s--~dg~i~iwd~ 235 (321)
T 3ow8_A 164 -GKFIL----SIAYSPDGKYL-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS--DDGYIKIYDV 235 (321)
T ss_dssp -SSCEE----EEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC--TTSCEEEEET
T ss_pred -CceEE----EEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc--CCCeEEEEEC
Confidence 34566 88887754444 4444577888888865544333443334568999999655554443 3456777776
Q ss_pred CCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 162 DGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 162 dg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
........+...-.....+++.+.+..|+-...|
T Consensus 236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 6544333332223456778888776666655555
No 212
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.79 E-value=0.32 Score=55.04 Aligned_cols=168 Identities=10% Similarity=0.100 Sum_probs=95.9
Q ss_pred eEEEEEEEcCCCeEEEeecc---cccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeC---CCCeEEEEEcCCC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQ---KGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCN---NDATINKIDLDSP 388 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~---~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~---~~~~I~~~~~~~~ 388 (652)
...++.+.+..+.|+++... ...|+.++..+...+.+..........+. ..++ ||+... ...+|.++++++.
T Consensus 228 ~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 228 TFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp CEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred EEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 45678888888888776533 34677776544444555543333344332 4566 777644 3578999988653
Q ss_pred CCc-cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCC
Q psy5768 389 KAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDAR 467 (652)
Q Consensus 389 ~~~-~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~ 467 (652)
... .+.++.........++++. .+.|+++.......+|+...++|...+.+.........+++.++.+++|++.-..
T Consensus 306 ~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 306 ARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp SGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred CccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 210 1444421112334667776 5777777543333578888887763333221112223455666667777765322
Q ss_pred ---CCeEEEEecCCCceEEEec
Q psy5768 468 ---LDKIERCDYDGTNRIVLSK 486 (652)
Q Consensus 468 ---~~~I~~~~ldG~~~~~l~~ 486 (652)
-..|+..++++...+.+..
T Consensus 384 ~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 384 FTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp TTEEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEECCCCcEEEEec
Confidence 2478889998776666544
No 213
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.79 E-value=0.00054 Score=58.81 Aligned_cols=54 Identities=24% Similarity=0.393 Sum_probs=38.8
Q ss_pred CCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccCcccccCCCceeecc-CeecCCc
Q psy5768 549 TPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCTINTVCSEHDFKCSD-GMCIPFN 609 (652)
Q Consensus 549 ~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~~~~~C~~~~f~C~~-g~Ci~~~ 609 (652)
++|..++++|.+.|+..++ +|+|.|+.||.+..+ ++|.+. .+|.|.+ +.||+..
T Consensus 55 ~~C~~~~~~C~~~C~n~~g-~y~C~C~~G~~~~~~g~~C~~~------~~~pC~~~~~~i~~~ 110 (114)
T 1aut_L 55 LNCSLDNGGCTHYCLEEVG-WRRCSCAPGYKLGDDLLQCHPA------VKFPCGRPWKRMEKK 110 (114)
T ss_dssp SSSSSGGGGCSSEEEECSS-SEEEECCTTEEECTTSSCEEEC------SSSCTTCCC------
T ss_pred CcCcCCCCCCCCEeECCCC-CEEeECCCCeeECCCCCccCcC------cccCCCCCCccCCCC
Confidence 5788778899999998776 699999999999888 888752 2567765 3677653
No 214
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.74 Score=48.65 Aligned_cols=69 Identities=4% Similarity=0.047 Sum_probs=45.4
Q ss_pred cEEEEccCCcEEEEeCCCCEEEEEEcC---CCcEEEEEe-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 92 HIAVDWIAQNIYWSDPKENVIEVARLT---GQYRYVLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 92 ~lavDw~~~~lY~~d~~~~~I~v~~~d---g~~~~~l~~-~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
++++...++.||.+-...+.|.+.+++ |.....+.. ..-..+..+++.|...+|+..+. ...|...++.
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--~g~v~~~~~~ 179 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK--FGDVYSIDIN 179 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--TSEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC--CCcEEEEecC
Confidence 788887777777777667888888876 444444332 22356789999997667776653 3455555543
No 215
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.57 Score=47.13 Aligned_cols=208 Identities=13% Similarity=0.108 Sum_probs=124.4
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ 391 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~ 391 (652)
-..+.+++|.+..+.|+... ..+.|...++........+ .....+..+++.+.++.|+.+ ...+.|.+.++....
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~-- 107 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCS-KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTG-SADYSIKLWDVSNGQ-- 107 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEE-SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTTEEEEEETTTCC--
T ss_pred eceEEEEEEcCCCCEEEEEe-CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCc--
Confidence 35577888988666555554 4577887776544333333 344578889998877766544 556889888886532
Q ss_pred cEEEEEeCCCCCceEEEEeCCCCEEEEEecC--CCCCceEEEeecCCCc--e----------EEEEc-CCCCCceEEEec
Q psy5768 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN--SHLPSIQRAFFSGFGT--E----------SIITT-DITMPNALALDH 456 (652)
Q Consensus 392 ~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~--~~~~~I~r~~ldG~~~--~----------~l~~~-~l~~P~glaiD~ 456 (652)
.... ......+..++++|...+|+.+... ...+.|....+..... . .+... .......+++++
T Consensus 108 ~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 108 CVAT--WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp EEEE--EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred EEEE--eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 2222 2355778999999987777766543 1112555555443321 1 11110 111567888888
Q ss_pred CCCEEEEEeCCCCeEEEEecCC-CceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 457 QAEKLFWGDARLDKIERCDYDG-TNRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 457 ~~~~LYw~D~~~~~I~~~~ldG-~~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.++.|+.+. ..+.|...++.. ......+........++++. .+.++++-...+.|...+..+++....+.
T Consensus 186 ~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 186 KGKYIIAGH-KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp GGCEEEEEE-TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEc-CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 888777765 346888888876 33333333333456777775 23333444456677777777776655554
No 216
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.73 E-value=0.19 Score=50.83 Aligned_cols=182 Identities=10% Similarity=0.010 Sum_probs=107.9
Q ss_pred EEEEEEEcCCCeEEEeec--------ccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCC----CCeEEEE
Q psy5768 316 IIELSYDYKRKTLFYSDI--------QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNN----DATINKI 383 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~--------~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~----~~~I~~~ 383 (652)
+..+.+ ..++|+|+-. ....|+.+++++.....+ ..+..+++.+.++.|+++... ...|+++
T Consensus 17 ~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 17 LSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp EEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred cccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 344444 3456766521 245688888877554444 456778999999999887643 3358888
Q ss_pred EcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCC------------------------CCCceEEEeecCCCc-
Q psy5768 384 DLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNS------------------------HLPSIQRAFFSGFGT- 438 (652)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~------------------------~~~~I~r~~ldG~~~- 438 (652)
++.+.. .+.+.... . ..+++..|...+|+++.... ....|++..+++...
T Consensus 91 ~~~~g~--~~~l~~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 91 DLETLS--SKKILEAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp ETTTTE--EEEEEEES--E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred ECCCCc--eEEEEcCC--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 876532 23333322 2 78899999888888875320 013688888877655
Q ss_pred eEEEEcCCCCCceEEEecCCCEEEEEeCC--------CCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCC--
Q psy5768 439 ESIITTDITMPNALALDHQAEKLFWGDAR--------LDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWV-- 508 (652)
Q Consensus 439 ~~l~~~~l~~P~glaiD~~~~~LYw~D~~--------~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~-- 508 (652)
+.+.. . ....+++.+++ .+|.+... ...|+.++ .|. .+.+... .....+.-++.+|++....
T Consensus 166 ~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~--~~~~~~spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 166 EEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK--VSFYAVDSDGERILLYGKPEK 237 (347)
T ss_dssp EEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE--ESEEEEEECSSCEEEEECCSS
T ss_pred eeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-eEEeccC--cceeeECCCCCEEEEEEcccc
Confidence 44444 3 56788888776 55555332 34678887 443 3334332 2223334456677665432
Q ss_pred -----CCeEEEEE
Q psy5768 509 -----IHAVLRAN 516 (652)
Q Consensus 509 -----~~~I~~~~ 516 (652)
...|+..+
T Consensus 238 ~~~~~~~~l~~~d 250 (347)
T 2gop_A 238 KYMSEHNKLYIYD 250 (347)
T ss_dssp SCCCSSCEEEEEC
T ss_pred CCccccceEEEEC
Confidence 34677777
No 217
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.72 E-value=0.19 Score=51.58 Aligned_cols=197 Identities=11% Similarity=-0.004 Sum_probs=114.0
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.+++|.+..+.|.-.. ..+.|...++........+ .....+..|++.+.++.++.+-...++|.+.++.....
T Consensus 140 ~~V~~v~~spdg~~l~sgs-~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-- 216 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGG-KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-- 216 (357)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC--
T ss_pred CCEEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce--
Confidence 4578899988766655444 4577877777644332233 33456788999888887888887788888777654321
Q ss_pred EEEEE-eCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 393 IVVVR-LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 393 ~~~~~-~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
...+. ......+.+++.+|..+.++.+-... ..|...++........+...-.....|++.+.++++..+-...+.|
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d--~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDET--GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEESS--SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred eeeeeeccccccccchhhhhcccceEEEeecc--cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 11111 12234578899999888777664332 2555555543322222222223457888887776654443445677
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEE
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~ 516 (652)
...|++......... ......+|++. ++.++.|-...+.|..-+
T Consensus 295 ~iwd~~~~~~~~~~~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 295 AVLDADFSEVFRDLS-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EEECTTSCEEEEECC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEECCCCcEeEECC-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 777877554333322 22345777774 344444444455554433
No 218
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.72 E-value=0.23 Score=56.41 Aligned_cols=195 Identities=12% Similarity=0.086 Sum_probs=119.4
Q ss_pred cCCCeEEEeecc----cccEEEEeccCCcceEEeecc-------CceeeeEEEccCCEEEEEeCCCC----eEEEEEcCC
Q psy5768 323 YKRKTLFYSDIQ----KGTINSVFFNGSNHRVLLERQ-------GSVEGLAYEYVHNYLYWTCNNDA----TINKIDLDS 387 (652)
Q Consensus 323 ~~~~~lywsd~~----~~~I~~~~~~g~~~~~i~~~~-------~~~~glAvDw~~~~LYwtd~~~~----~I~~~~~~~ 387 (652)
+..+++|++-.. ...|++....+...++++... ....++++.+.++.|.++....+ .|.+.++.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 345667766432 235788877665556665211 13667899999998887654333 799999876
Q ss_pred CCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC-------------CCceEEEeecCCCce-EEEEcC---CCCCc
Q psy5768 388 PKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH-------------LPSIQRAFFSGFGTE-SIITTD---ITMPN 450 (652)
Q Consensus 388 ~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~-------------~~~I~r~~ldG~~~~-~l~~~~---l~~P~ 450 (652)
.. .... .... ....+++..|....||++..... ..+|++..+.+...+ .++... -.+..
T Consensus 161 g~--~~~~-~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 161 AK--ELPD-VLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG 236 (710)
T ss_dssp TE--EEEE-EEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred CC--CCcc-cccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE
Confidence 32 1111 1111 23567999998888888764322 235888888655432 343222 12345
Q ss_pred eEEEecCCCEEEEEeC-C---CCeEEEEecCC------C--ceEEEecCCCCceeEEEEeCCEEEEEcCC---CCeEEEE
Q psy5768 451 ALALDHQAEKLFWGDA-R---LDKIERCDYDG------T--NRIVLSKISPLHPFDMAVYGEFIFWTDWV---IHAVLRA 515 (652)
Q Consensus 451 glaiD~~~~~LYw~D~-~---~~~I~~~~ldG------~--~~~~l~~~~~~~p~glav~~~~lYwtd~~---~~~I~~~ 515 (652)
++++.+++++|++.-. . ...|+.+++++ . ..+.+..........+.-++++||+.... ...|+.+
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEE
Confidence 8899999999988753 2 46899999875 3 34444443222333355568888876543 3478888
Q ss_pred EccCCc
Q psy5768 516 NKYTGE 521 (652)
Q Consensus 516 ~k~~g~ 521 (652)
+..++.
T Consensus 317 d~~~~~ 322 (710)
T 2xdw_A 317 DFTDPE 322 (710)
T ss_dssp ETTSCC
T ss_pred eCCCCC
Confidence 876664
No 219
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.69 E-value=0.14 Score=54.00 Aligned_cols=196 Identities=10% Similarity=0.055 Sum_probs=120.9
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcc--------eEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH--------RVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~--------~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
.+.++++++....++.+-...+.|...+++.... ..+......+..+++.+.+++++.+....+.|.+.++.
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 4567788877664555555667788877764211 11113334688899988788888898889999999987
Q ss_pred CCCCc-cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCC-CceEEEEcCCCCCceEEEecCCCEEEEE
Q psy5768 387 SPKAQ-RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF-GTESIITTDITMPNALALDHQAEKLFWG 464 (652)
Q Consensus 387 ~~~~~-~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~-~~~~l~~~~l~~P~glaiD~~~~~LYw~ 464 (652)
..... ....+. .....++.|+++|...+++.+-... +.|...++... .....+...-.....|++.+.++.++.+
T Consensus 263 ~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~d--g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 263 NNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp CSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETT--SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEE
T ss_pred CCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeCC--CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEE
Confidence 53211 111222 3456789999999877777765443 36666666542 2222233233456789999888887877
Q ss_pred eCCCCeEEEEecCCC--------------ceEEEecCCCCceeEEEEeC--CEEEEEcCCCCeEE
Q psy5768 465 DARLDKIERCDYDGT--------------NRIVLSKISPLHPFDMAVYG--EFIFWTDWVIHAVL 513 (652)
Q Consensus 465 D~~~~~I~~~~ldG~--------------~~~~l~~~~~~~p~glav~~--~~lYwtd~~~~~I~ 513 (652)
-...+.|...++... ............+..+++.. .+++.+-...+.|.
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE
Confidence 766777888887641 12222222234577787763 33555555555443
No 220
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.68 E-value=0.27 Score=50.49 Aligned_cols=178 Identities=7% Similarity=0.028 Sum_probs=110.9
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC-C
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK-K 82 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~-~ 82 (652)
+++....+.|.++++............+ .-..+.++++.+.++.++++- ...+.|..+++.+.....+.... .
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~ 162 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKTSFIQGMG----PGDAITGMKFNQFNTNQLFVS--SIRGATTLRDFSGSVIQVFAKTDSW 162 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCEEEECCCS----TTCBEEEEEEETTEEEEEEEE--ETTTEEEEEETTSCEEEEEECCCCS
T ss_pred EEEEcCCCeEEEEeCCCcccceeeecCC----cCCceeEEEeCCCCCCEEEEE--eCCCEEEEEECCCCceEEEeccCCC
Confidence 4444456788999988655544443211 336889999999554444444 36788999999876544443322 0
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
...+. .+++....+.| ++-...+.|.+.+++++....+.. .......+++.|...+++.+-. ....|...++.
T Consensus 163 ~~~v~----~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~ 235 (383)
T 3ei3_B 163 DYWYC----CVDVSVSRQML-ATGDSTGRLLLLGLDGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSS-VDATVKLWDLR 235 (383)
T ss_dssp SCCEE----EEEEETTTTEE-EEEETTSEEEEEETTSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEE-TTSEEEEEEGG
T ss_pred CCCeE----EEEECCCCCEE-EEECCCCCEEEEECCCCEEEEecc-CCCcEEEEEECCCCCCEEEEEe-CCCEEEEEeCC
Confidence 13366 88888755544 444467899999998776655543 3467889999997663555533 24567776665
Q ss_pred C----CCcEEEEeecccCceeEEEec-cCCEEEEEeCC
Q psy5768 163 G----KKQTILAQEIIMPIKDITLDL-KFFSAFYRNLS 195 (652)
Q Consensus 163 g----~~~~~~~~~~~~~p~gl~lD~-~~~~ly~~d~~ 195 (652)
. ....... ..-..+..+++++ .+..|+....+
T Consensus 236 ~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 236 NIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp GCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred CCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence 3 1112112 2235678889888 66667666665
No 221
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.67 E-value=1.3 Score=50.41 Aligned_cols=175 Identities=8% Similarity=-0.037 Sum_probs=109.4
Q ss_pred EEEecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC
Q psy5768 3 IAVSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK 81 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~ 81 (652)
|++++ .++.|.+++.+ |+...++... -..+.++++++..++|.... ..+.|..+++........+...
T Consensus 28 la~~~-~~g~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 28 VLTTL-YSGRVEIWNYETQVEVRSIQVT-------ETPVRAGKFIARKNWIIVGS---DDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp EEEEE-TTSEEEEEETTTTEEEEEEECC-------SSCEEEEEEEGGGTEEEEEE---TTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEe-CCCEEEEEECCCCceEEEEecC-------CCcEEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEEecC
Confidence 44443 56789999965 5455555532 25789999999998888876 5688999998755433334444
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCC-cEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQ-YRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAG 160 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~-~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ 160 (652)
...+. .+++...+..|+.+. ..+.|.+.+++.. .....+.........++..|..|.++.+-. ....|...+
T Consensus 97 -~~~v~----~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~v~vwd 169 (814)
T 3mkq_A 97 -PDYIR----SIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC-LDRTVKVWS 169 (814)
T ss_dssp -SSCEE----EEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEE
T ss_pred -CCCEE----EEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe-CCCeEEEEE
Confidence 45567 888877555565444 5778999998765 444444444456789999985665555533 245777777
Q ss_pred CCCCCcEEEEeec-ccCceeEEEec--cCCEEEEEeCC
Q psy5768 161 LDGKKQTILAQEI-IMPIKDITLDL--KFFSAFYRNLS 195 (652)
Q Consensus 161 ldg~~~~~~~~~~-~~~p~gl~lD~--~~~~ly~~d~~ 195 (652)
+............ ......++..+ .+..|+....+
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp TTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred CCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 7654433322222 24456666665 44444444333
No 222
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.66 E-value=0.00057 Score=57.88 Aligned_cols=60 Identities=25% Similarity=0.524 Sum_probs=36.7
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCceeeeccCceeeccCCcccCcccccCCCceeeccCeecC
Q psy5768 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIP 607 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d~~C~~~~~~C~~~~f~C~~g~Ci~ 607 (652)
..|..+||...+++|++.|+..+. +|+|.|+.||.+...++|.. ...|.. ...|. +.|+.
T Consensus 25 ~~Cd~neC~~~~~~C~~~C~n~~g-~y~C~C~~Gy~g~~g~~C~d-ideC~~-~~~C~-~~C~n 84 (107)
T 2w2n_E 25 GAMGTNECLDNNGGCSYVCNDLKI-GYECLCPDGFQLVAQRRCED-IDECQD-PDTCS-QLCVN 84 (107)
T ss_dssp CCBSCCGGGTGGGGCSSEEECCSB-SCEEECCTTCEEETTTEEEC-------------------
T ss_pred CCCcCccCcCCCCCCCCEeEeCCC-CeEEECCCCccccCCCcccc-ccccCC-CCCcC-Ceeec
Confidence 456779999888999999998776 69999999999864478874 445641 22354 45554
No 223
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.58 E-value=0.76 Score=46.48 Aligned_cols=204 Identities=14% Similarity=0.026 Sum_probs=120.0
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCc---ceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSN---HRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~---~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
+.+++|++..+.|+... ..+.|+..++++.. ...+......+.+|++.+.++.|+.+. ..+.|.+.++.... .
T Consensus 11 i~~~~~s~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~--~ 86 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICP-NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRT--W 86 (372)
T ss_dssp CCEEEECTTSSEEEEEC-SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTE--E
T ss_pred eEEEEECCCCCEEEEEe-CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCe--e
Confidence 45677877666555543 35777777776653 222223445788999998777776554 55778877775421 1
Q ss_pred EEEEE-eCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE---cC-CCCCceEEEecCCCEEEEEeCC
Q psy5768 393 IVVVR-LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT---TD-ITMPNALALDHQAEKLFWGDAR 467 (652)
Q Consensus 393 ~~~~~-~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~---~~-l~~P~glaiD~~~~~LYw~D~~ 467 (652)
..... ......+.+++++|...+|+..... +.|....++......+.. .. -..+..|++.+.++.|+.+. .
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~ 162 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS-C 162 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE-T
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeCC---CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc-C
Confidence 22222 2344678899999987777776643 256666666554321111 11 23467889988777766654 3
Q ss_pred CCeEEEEecC------------------CCceEEEecCCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 468 LDKIERCDYD------------------GTNRIVLSKISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 468 ~~~I~~~~ld------------------G~~~~~l~~~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.+.|...++. .......+........++++. +.+|+.. ...+.|...+..+++....+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV-SHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE-ETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE-eCCCEEEEEECCCCceeEEEc
Confidence 4567777753 112222222222446777775 3355444 456778777877777666655
Q ss_pred c
Q psy5768 528 K 528 (652)
Q Consensus 528 ~ 528 (652)
.
T Consensus 242 ~ 242 (372)
T 1k8k_C 242 S 242 (372)
T ss_dssp C
T ss_pred c
Confidence 3
No 224
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.56 E-value=0.39 Score=49.87 Aligned_cols=183 Identities=9% Similarity=-0.024 Sum_probs=111.0
Q ss_pred EEecCCCCeEEEEecCCC--------eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccE
Q psy5768 4 AVSSPTQSKIVVCNLEGE--------YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRE 75 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~ 75 (652)
+++....+.|.++++... ....+.. .-..+..|++++..+.++++- ...+.|..+++......
T Consensus 97 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-------h~~~v~~~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 97 IASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-------HTKRVGIVAWHPTAQNVLLSA--GCDNVILVWDVGTGAAV 167 (402)
T ss_dssp EEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-------CSSCEEEEEECSSBTTEEEEE--ETTSCEEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEEccCCCCccccCCceEEecC-------CCCeEEEEEECcCCCCEEEEE--cCCCEEEEEECCCCCcc
Confidence 333345677888887653 2334433 235789999999874444444 35688999998755433
Q ss_pred EEE--eCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEE-eCC-CCCceeEEEcCCCCeEEEEec-
Q psy5768 76 TVV--SQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLI-SGG-VDQPSALAVDPESGYLFWSES- 150 (652)
Q Consensus 76 ~v~--~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~-~~~-~~~P~~iavd~~~g~lywtd~- 150 (652)
..+ ... ...+. .+++...++.|+.+ ...+.|.+.++........+ ... -..+..++..| +|.++.+-.
T Consensus 168 ~~~~~~~~-~~~v~----~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~ 240 (402)
T 2aq5_A 168 LTLGPDVH-PDTIY----SVDWSRDGALICTS-CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFS 240 (402)
T ss_dssp EEECTTTC-CSCEE----EEEECTTSSCEEEE-ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEEC
T ss_pred EEEecCCC-CCceE----EEEECCCCCEEEEE-ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEecc
Confidence 333 223 34566 88887745555444 46789999998755443333 222 22478899998 466655532
Q ss_pred -CCCCeEEEEeCCCCCc-EEEEe-ecccCceeEEEeccCCEEEEEeCCCCcEEEE
Q psy5768 151 -GKIPLIARAGLDGKKQ-TILAQ-EIIMPIKDITLDLKFFSAFYRNLSKGNIHII 202 (652)
Q Consensus 151 -~~~~~I~~~~ldg~~~-~~~~~-~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i 202 (652)
.....|...++..... ..... ..-..+..+++++.++.||.+....+..+..
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEE
T ss_pred CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEE
Confidence 2345777777765332 22222 2234678899999999998877543555444
No 225
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.55 E-value=0.00086 Score=57.51 Aligned_cols=41 Identities=32% Similarity=0.664 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccccc
Q psy5768 237 TNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEY 277 (652)
Q Consensus 237 ~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~ 277 (652)
.++|..+|++|+|.|+...++|+|.|+.|| +..++++|...
T Consensus 54 ~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 54 FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp SSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred CCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcC
Confidence 468998889999999988889999999998 55799999743
No 226
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.54 E-value=1 Score=47.48 Aligned_cols=199 Identities=10% Similarity=-0.036 Sum_probs=120.8
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcce-----EEeeccCceeeeEEEcc---CCEEEEEeCCCCeEEEEEc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHR-----VLLERQGSVEGLAYEYV---HNYLYWTCNNDATINKIDL 385 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~-----~i~~~~~~~~glAvDw~---~~~LYwtd~~~~~I~~~~~ 385 (652)
..+.+++|++....|+..+. .+.|+.+++...... .+......+..|++.+. ++.|+ +-...+.|.+.++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADK-FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHY 227 (450)
T ss_dssp SCEEEEEECTTSSEEEEEET-TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEeC-CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEEC
Confidence 45789999998888887765 577888886543222 22233457888999987 54554 5455678888887
Q ss_pred CCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc---------------------
Q psy5768 386 DSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT--------------------- 444 (652)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~--------------------- 444 (652)
.... ....+.......+.+++++ ...+|+..... ..|...++........+..
T Consensus 228 ~~~~--~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 228 PQCF--IVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp SCTT--CEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred CCCc--eeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 6432 1222122334667899998 55666655432 2666666654332222220
Q ss_pred ----CCCCCceEEEecCCCEEEEEeCCCCeEEEEec--CCC-ceEEE--ecCCCCceeEEEEeCCEEEEEcCCC------
Q psy5768 445 ----DITMPNALALDHQAEKLFWGDARLDKIERCDY--DGT-NRIVL--SKISPLHPFDMAVYGEFIFWTDWVI------ 509 (652)
Q Consensus 445 ----~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~l--dG~-~~~~l--~~~~~~~p~glav~~~~lYwtd~~~------ 509 (652)
.-....+|++.+.++.||.+-...+.|...++ ... ..+.+ +... ..+.++++..+.++.+--..
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~ 380 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQ 380 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSC
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCC
Confidence 01234578888888899988766778888887 322 11221 2223 67889999887776663221
Q ss_pred -C--eEEEEEccCCc
Q psy5768 510 -H--AVLRANKYTGE 521 (652)
Q Consensus 510 -~--~I~~~~k~~g~ 521 (652)
+ .|+.++..+|.
T Consensus 381 ~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 381 KNFAKFIEYNLNENS 395 (450)
T ss_dssp CCSEEEEEEETTTTE
T ss_pred CcceEEEEEEcCCCe
Confidence 1 66777765554
No 227
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.53 E-value=0.88 Score=46.59 Aligned_cols=165 Identities=14% Similarity=0.046 Sum_probs=97.7
Q ss_pred ceEEEEEEE----cCCCe-EEEeecccccEEEEeccC-------Ccce-----EEee-------ccCceeeeEEEccCCE
Q psy5768 314 KNIIELSYD----YKRKT-LFYSDIQKGTINSVFFNG-------SNHR-----VLLE-------RQGSVEGLAYEYVHNY 369 (652)
Q Consensus 314 ~~~~~v~~D----~~~~~-lywsd~~~~~I~~~~~~g-------~~~~-----~i~~-------~~~~~~glAvDw~~~~ 369 (652)
..+.+++|. +..+. |+... ..+.|...++.. .... .+.. ....+..+++.+.+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 198 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-- 198 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--
T ss_pred CcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--
Confidence 557889998 76666 55444 457777776654 2222 2211 24467889998876
Q ss_pred EEEEeCCCCeEEEEEcCCCCCccEEEEEeCC-------CCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEE
Q psy5768 370 LYWTCNNDATINKIDLDSPKAQRIVVVRLGQ-------HDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESII 442 (652)
Q Consensus 370 LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~-------~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~ 442 (652)
++.+-...+.|.+.++... +.+..... .....+|+++|...+|+........+.|...++........+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTL----RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEEECTTSEEEEEETTTT----EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCcEEEEECCCC----ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 5566667789999998642 33333333 567889999997776666543211125666665443332222
Q ss_pred Ec-------------CCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEec
Q psy5768 443 TT-------------DITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSK 486 (652)
Q Consensus 443 ~~-------------~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~ 486 (652)
.. .-.....+++.+.++.|+.+. ..+.|...++........+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEE
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCceeEEEe
Confidence 22 223457889988877776654 45678888887554433333
No 228
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.51 E-value=0.45 Score=54.25 Aligned_cols=115 Identities=6% Similarity=0.102 Sum_probs=71.2
Q ss_pred eEEEEeCCCCE-EEEEecCCCCCceEEEeecCCC-------ceEEEEc-CCCC-----CceEEEecCCCEEE-EEe--CC
Q psy5768 405 RGIDIDSCDSR-IYWTNWNSHLPSIQRAFFSGFG-------TESIITT-DITM-----PNALALDHQAEKLF-WGD--AR 467 (652)
Q Consensus 405 ~~Iavdp~~g~-Lywtd~~~~~~~I~r~~ldG~~-------~~~l~~~-~l~~-----P~glaiD~~~~~LY-w~D--~~ 467 (652)
..++..|.... +|+...++....|...++++.. ...++.+ .-.| +...+..+++++|+ |.- .+
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G 342 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC
Confidence 45666775542 3445544433468888887765 2334322 2222 34677888888887 763 34
Q ss_pred CCeEEEEecCCCceEEEecCCCCceeEE-EEeCCEEEEEcCC------CCeEEEEEccCC
Q psy5768 468 LDKIERCDYDGTNRIVLSKISPLHPFDM-AVYGEFIFWTDWV------IHAVLRANKYTG 520 (652)
Q Consensus 468 ~~~I~~~~ldG~~~~~l~~~~~~~p~gl-av~~~~lYwtd~~------~~~I~~~~k~~g 520 (652)
...|+.++++|...+.+.... .....+ .+++++||++... ...|++++..++
T Consensus 343 ~~~l~~~~~~~~~~~~lT~g~-~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 343 YRHICYFQIDKKDCTFITKGT-WEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp CEEEEEEETTCSSCEESCCSS-SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred ceEEEEEECCCCceEecccCC-EEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 568999999998877766543 222222 2558899998654 357888886544
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.50 E-value=0.69 Score=52.32 Aligned_cols=197 Identities=12% Similarity=0.074 Sum_probs=115.3
Q ss_pred eEEEEEEEcCCCeEEEee-ccc---ccEEEEeccCCcceEE-eeccCceeeeEEEccCCEEEEEeCC------------C
Q psy5768 315 NIIELSYDYKRKTLFYSD-IQK---GTINSVFFNGSNHRVL-LERQGSVEGLAYEYVHNYLYWTCNN------------D 377 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd-~~~---~~I~~~~~~g~~~~~i-~~~~~~~~glAvDw~~~~LYwtd~~------------~ 377 (652)
.+.++.+.+..++|-|+- ... ..|+..++.+...... +.+. ...+++.. .++.||++... .
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 355677777777666543 222 3577777776443222 2222 12455655 68888887654 2
Q ss_pred CeEEEEEcCCCCCccEEEEEeCCCC----CceEEEEeCCCCEEEEEecCCC-CCceEEEeecCCC--ceEEEEcCCCCCc
Q psy5768 378 ATINKIDLDSPKAQRIVVVRLGQHD----KPRGIDIDSCDSRIYWTNWNSH-LPSIQRAFFSGFG--TESIITTDITMPN 450 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~~~~~----~P~~Iavdp~~g~Lywtd~~~~-~~~I~r~~ldG~~--~~~l~~~~l~~P~ 450 (652)
.+|.+.++..... ...++. .... .-.++++.|...+|+++..... ...|+...+++.. .+.|.. ....-.
T Consensus 208 ~~v~~~~lgt~~~-~~~~v~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~-~~~~~~ 284 (693)
T 3iuj_A 208 HKVYFHRLGTAQE-DDRLVF-GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG-DLDADV 284 (693)
T ss_dssp CEEEEEETTSCGG-GCEEEE-SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC-SSSSCE
T ss_pred cEEEEEECCCCcc-cceEEE-ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC-CCCceE
Confidence 4588877754321 123332 2222 2357889999889988765332 2388888887653 333332 221111
Q ss_pred eEEEecCCCEEEEEeC---CCCeEEEEecCCCce---EEEecCCCCceeEEEEeCCEEEEEcCCCC--eEEEEEcc
Q psy5768 451 ALALDHQAEKLFWGDA---RLDKIERCDYDGTNR---IVLSKISPLHPFDMAVYGEFIFWTDWVIH--AVLRANKY 518 (652)
Q Consensus 451 glaiD~~~~~LYw~D~---~~~~I~~~~ldG~~~---~~l~~~~~~~p~glav~~~~lYwtd~~~~--~I~~~~k~ 518 (652)
. .+++.+++||+.-. ...+|..+++++... +.+........ +++.++++|+++-...+ .|+..+..
T Consensus 285 ~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 285 S-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp E-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred E-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 1 25667899988743 357899999988654 55554332334 88888999888765443 56666654
No 230
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.43 E-value=0.025 Score=61.48 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=75.8
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCC---------------------CCEEEEEEcCCCc--------EEEEEeC-----
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPK---------------------ENVIEVARLTGQY--------RYVLISG----- 128 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~---------------------~~~I~v~~~dg~~--------~~~l~~~----- 128 (652)
+.+|+ +++++..++.||++-++ .++|.+..+++.. ...++.+
T Consensus 383 mdRpE----di~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~ 458 (592)
T 4a9v_A 383 MDRPE----WIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVH 458 (592)
T ss_dssp EECEE----EEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTS
T ss_pred ccCcc----ceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccc
Confidence 67799 99999999999998542 2789999876421 2223221
Q ss_pred ---------------CCCCceeEEEcCCCCeEEE-EecCC----------CCeEEEEeCCCCCcEEEEee-cccCceeEE
Q psy5768 129 ---------------GVDQPSALAVDPESGYLFW-SESGK----------IPLIARAGLDGKKQTILAQE-IIMPIKDIT 181 (652)
Q Consensus 129 ---------------~~~~P~~iavd~~~g~lyw-td~~~----------~~~I~~~~ldg~~~~~~~~~-~~~~p~gl~ 181 (652)
.+..|..|++|+ .|.||+ ||-+. +..+.+...+......++.. ....|+||+
T Consensus 459 ~~~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGia 537 (592)
T 4a9v_A 459 AGTPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGIS 537 (592)
T ss_dssp TTSGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEE
T ss_pred ccccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCE
Confidence 267899999998 689999 88531 33788887754444444433 246799999
Q ss_pred EeccCCEEEEE
Q psy5768 182 LDLKFFSAFYR 192 (652)
Q Consensus 182 lD~~~~~ly~~ 192 (652)
+.+....||+.
T Consensus 538 fSPD~ktLfV~ 548 (592)
T 4a9v_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99999999995
No 231
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.40 E-value=0.87 Score=45.10 Aligned_cols=170 Identities=12% Similarity=0.015 Sum_probs=103.5
Q ss_pred CCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCc
Q psy5768 8 PTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAV 86 (652)
Q Consensus 8 ~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p 86 (652)
...+.|.+++.. ++....+.. .-..+.++++++..+.|+-.. ..+.|..+++........+... ...+
T Consensus 42 ~~dg~i~iw~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~-~~~v 110 (312)
T 4ery_A 42 SADKLIKIWGAYDGKFEKTISG-------HKLGISDVAWSSDSNLLVSAS---DDKTLKIWDVSSGKCLKTLKGH-SNYV 110 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEEEECC-SSCE
T ss_pred eCCCeEEEEeCCCcccchhhcc-------CCCceEEEEEcCCCCEEEEEC---CCCEEEEEECCCCcEEEEEcCC-CCCE
Confidence 355677888775 444444432 235688999999888877665 5678888888754433334444 4456
Q ss_pred cCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCc
Q psy5768 87 TACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ 166 (652)
Q Consensus 87 ~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~ 166 (652)
. .+++....+.| .+-+..+.|.+.++........+.........+++.|...+|+.... ...|...++.....
T Consensus 111 ~----~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 111 F----CCNFNPQSNLI-VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCRIWDTASGQC 183 (312)
T ss_dssp E----EEEECSSSSEE-EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCE
T ss_pred E----EEEEcCCCCEE-EEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCce
Confidence 6 77887654444 44445778988888754443333333345678999986555655543 45677766654332
Q ss_pred -EEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 167 -TILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 167 -~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
..+..........+++++.+..|+....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp EEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred eeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 22222223345667888777766666555
No 232
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.38 E-value=0.34 Score=48.89 Aligned_cols=188 Identities=11% Similarity=-0.008 Sum_probs=106.1
Q ss_pred EEEEEEEcCCCeEEEeecc----cccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCC---------------
Q psy5768 316 IIELSYDYKRKTLFYSDIQ----KGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNN--------------- 376 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~----~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~--------------- 376 (652)
+..+.+.+..++|+++... ...|+.+++++.....+...-. +.++++.+.++.|+++...
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 4567788888888877543 3458888887765555543323 7788888889988887532
Q ss_pred -----------CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC------CCceEEEeecCCCce
Q psy5768 377 -----------DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH------LPSIQRAFFSGFGTE 439 (652)
Q Consensus 377 -----------~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~------~~~I~r~~ldG~~~~ 439 (652)
...|.++++.+.. ....+.. . ....++..|.. .+|.+..... ...|+... .| ..+
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~--~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~~ 211 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEE--VIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DG-KEE 211 (347)
T ss_dssp C---------CEEEEEEEETTTTE--EEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TT-EEE
T ss_pred eecCcccccCccceEEEEECCCCe--EEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC-CC-ceE
Confidence 3568888876532 2123332 2 67889999965 6665544321 23677766 33 333
Q ss_pred EEEEcCCCCCceEEEecCCCEEEEEeCC-------CCeEEEEecCCCceEEEecCCCCceeE-EEEeCCEEEEEcCCC--
Q psy5768 440 SIITTDITMPNALALDHQAEKLFWGDAR-------LDKIERCDYDGTNRIVLSKISPLHPFD-MAVYGEFIFWTDWVI-- 509 (652)
Q Consensus 440 ~l~~~~l~~P~glaiD~~~~~LYw~D~~-------~~~I~~~~ldG~~~~~l~~~~~~~p~g-lav~~~~lYwtd~~~-- 509 (652)
.+... .... .+.+++++|+++... ...|..++ .| ..+.+.........+ +++. +.+|++....
T Consensus 212 ~l~~~--~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~ 284 (347)
T 2gop_A 212 KMFEK--VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD-GK-EVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGS 284 (347)
T ss_dssp EEEEE--ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC-SS-CEEESSTTCCSEEEEEEEET-TEEEEEEEETTE
T ss_pred EeccC--ccee--eECCCCCEEEEEEccccCCccccceEEEEC-CC-ceEeccccCCcccCCccEEc-CcEEEEEecCCc
Confidence 44332 2222 236678888877532 35788888 44 333333322122333 4444 4366653333
Q ss_pred CeEEEEEccCCce
Q psy5768 510 HAVLRANKYTGEE 522 (652)
Q Consensus 510 ~~I~~~~k~~g~~ 522 (652)
..|+ ++ +|+.
T Consensus 285 ~~l~-~~--~g~~ 294 (347)
T 2gop_A 285 VNLY-IW--DGEI 294 (347)
T ss_dssp EEEE-EE--SSSE
T ss_pred EEEE-Ec--CCce
Confidence 3466 65 4544
No 233
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.34 E-value=0.52 Score=47.73 Aligned_cols=173 Identities=8% Similarity=-0.039 Sum_probs=101.9
Q ss_pred EecCCCCeEEEEecCCC---eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccE-EEE-e
Q psy5768 5 VSSPTQSKIVVCNLEGE---YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRE-TVV-S 79 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~-~v~-~ 79 (652)
++....+.|+++++++. ....+.. .-..+.++++++....|+... ..+.|..+++...... .+. .
T Consensus 24 ~~~~~d~~v~i~~~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 24 AICPNNHEVHIYEKSGNKWVQVHELKE-------HNGQVTGVDWAPDSNRIVTCG---TDRNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp EEECSSSEEEEEEEETTEEEEEEEEEC-------CSSCEEEEEEETTTTEEEEEE---TTSCEEEEEEETTEEEEEEECC
T ss_pred EEEeCCCEEEEEeCCCCcEEeeeeecC-------CCCcccEEEEeCCCCEEEEEc---CCCeEEEEECCCCeeeeeEEee
Confidence 33345788999998876 3444443 235789999999888887665 5577888887654322 222 2
Q ss_pred CCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc----EEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5768 80 QKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY----RYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 155 (652)
Q Consensus 80 ~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~----~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~ 155 (652)
.. ...+. .+++...++.|+.+. ..+.|.+.+++... ...+..........+++.|...+|+.... ...
T Consensus 94 ~~-~~~v~----~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~ 165 (372)
T 1k8k_C 94 RI-NRAAR----CVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC--DFK 165 (372)
T ss_dssp CC-SSCEE----EEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET--TSC
T ss_pred cC-CCcee----EEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC--CCC
Confidence 22 34466 788876555555544 56778777776543 22222222456789999995555555443 345
Q ss_pred EEEEeCC------------------CCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 156 IARAGLD------------------GKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 156 I~~~~ld------------------g~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
|...++. .......+...-..+..+++++.+..|+....+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC
Confidence 5555532 111111111123456788888777777666655
No 234
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.24 E-value=0.0016 Score=60.21 Aligned_cols=41 Identities=27% Similarity=0.662 Sum_probs=35.2
Q ss_pred CCCCCCCCCCC---CcccceecCCCceEEEeCCc-cccCCCcccc
Q psy5768 236 GTNPCGVNNGG---CAELCLYNGVSAVCACAHGV-VAQDGKSCSE 276 (652)
Q Consensus 236 ~~n~C~~~ng~---Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~ 276 (652)
+.++|...+++ |+|.|...+++|+|.|+.|| |..|+++|..
T Consensus 123 di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp ECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 46889987766 99999988889999999998 6679999974
No 235
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.18 E-value=0.79 Score=46.91 Aligned_cols=200 Identities=10% Similarity=0.036 Sum_probs=116.3
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee--------------ccCceeeeEEEccCCEEEEEeCCCCe
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE--------------RQGSVEGLAYEYVHNYLYWTCNNDAT 379 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~--------------~~~~~~glAvDw~~~~LYwtd~~~~~ 379 (652)
..+.+++|.+.++.++++-...+.|...+++......... ....+..|++.+..+.++.+-...+.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 4578899998444555554456778888876533221111 33467888888756666667777788
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCC---EEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEec
Q psy5768 380 INKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDS---RIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH 456 (652)
Q Consensus 380 I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g---~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~ 456 (652)
|.+.++... +.+...........+++.|... +++..... +.|...++........+...-.....+++.+
T Consensus 124 i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 124 LKVWDTNTL----QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EEEEETTTT----EEEEEEECSSCEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EEEeeCCCC----ccceeccCCCceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 998888653 2333333445677888887543 44444432 3666666654443333332334567899998
Q ss_pred CCCEEEEEeCCCCeEEEEecCCCce-EEEe---------------cCCCCceeEEEEeC--CEEEEEcCCCCeEEEEEcc
Q psy5768 457 QAEKLFWGDARLDKIERCDYDGTNR-IVLS---------------KISPLHPFDMAVYG--EFIFWTDWVIHAVLRANKY 518 (652)
Q Consensus 457 ~~~~LYw~D~~~~~I~~~~ldG~~~-~~l~---------------~~~~~~p~glav~~--~~lYwtd~~~~~I~~~~k~ 518 (652)
.+..|+.+-...+.|...++..... ...+ ........++++.. .+|+... ..+.|...+..
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~ 275 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSS 275 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECC
Confidence 8886666555667788888764331 1111 11123356677753 3454443 45566666665
Q ss_pred CCc
Q psy5768 519 TGE 521 (652)
Q Consensus 519 ~g~ 521 (652)
+++
T Consensus 276 ~~~ 278 (408)
T 4a11_B 276 NGE 278 (408)
T ss_dssp TCC
T ss_pred CCc
Confidence 554
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.17 E-value=0.63 Score=53.22 Aligned_cols=199 Identities=6% Similarity=-0.002 Sum_probs=116.4
Q ss_pred eEEEEEEE-cCCCeEEEeeccc----ccEEEEeccCC-cc-eEEeeccCceeeeEEEccCCEEEEEeCCC----CeEEEE
Q psy5768 315 NIIELSYD-YKRKTLFYSDIQK----GTINSVFFNGS-NH-RVLLERQGSVEGLAYEYVHNYLYWTCNND----ATINKI 383 (652)
Q Consensus 315 ~~~~v~~D-~~~~~lywsd~~~----~~I~~~~~~g~-~~-~~i~~~~~~~~glAvDw~~~~LYwtd~~~----~~I~~~ 383 (652)
...++.+. +..++|.|+.... ..|+..++++. .. ...++. ...+++..+.++.||++.... .+|.+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~--~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG--TNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE--ECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC--ceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 34567777 7777777664433 24888888765 31 111111 134677777788888876532 368888
Q ss_pred EcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCC--c--eEEEEcCCCCCceEEEe-cCC
Q psy5768 384 DLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFG--T--ESIITTDITMPNALALD-HQA 458 (652)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~--~--~~l~~~~l~~P~glaiD-~~~ 458 (652)
++.+.......+........-.++++.|...+|+|+.+......|+...+++.. . +.+.. ....+ -..+| ..+
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~-~~s~~~~~g 330 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP-REKGV-RYDVQMHGT 330 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-CCTTC-CEEEEEETT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-CCCCc-eEEEeeeeC
Confidence 886532112233322222334567899999999998765444588888888653 2 22222 11112 23455 458
Q ss_pred CEEEEEeC----CCCeEEEEecCC-Cc-eE-EEecCCCCceeEEEEeCCEEEEEcCCCC--eEEEEEc
Q psy5768 459 EKLFWGDA----RLDKIERCDYDG-TN-RI-VLSKISPLHPFDMAVYGEFIFWTDWVIH--AVLRANK 517 (652)
Q Consensus 459 ~~LYw~D~----~~~~I~~~~ldG-~~-~~-~l~~~~~~~p~glav~~~~lYwtd~~~~--~I~~~~k 517 (652)
++|||.-. ...+|..+++++ .. +. ++.........+++.++++||++-...+ .|+.++.
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 88888732 345899999985 33 33 3333221234567778888888755443 5666664
No 237
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.17 E-value=0.41 Score=48.95 Aligned_cols=169 Identities=10% Similarity=0.020 Sum_probs=101.4
Q ss_pred ecCCCCeEEEEecCC-CeeEEEe-cCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCc
Q psy5768 6 SSPTQSKIVVCNLEG-EYQTTIL-SNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY 83 (652)
Q Consensus 6 ~~~~~~~I~~~~~~g-~~~~~~~-~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~ 83 (652)
+....+.|+++|++. +....+. ...+ .-..+.+|+|++...+|.-.. ..+.|..+++........+... .
T Consensus 98 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~----H~~~V~~v~~spdg~~l~sgs---~d~~i~iwd~~~~~~~~~~~~h-~ 169 (344)
T 4gqb_B 98 VASDSGAVELWELDENETLIVSKFCKYE----HDDIVSTVSVLSSGTQAVSGS---KDICIKVWDLAQQVVLSSYRAH-A 169 (344)
T ss_dssp EEETTSEEEEEEECTTSSCEEEEEEEEC----CSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCC-S
T ss_pred EEECCCEEEEEeccCCCceeEeeccccC----CCCCEEEEEECCCCCEEEEEe---CCCeEEEEECCCCcEEEEEcCc-C
Confidence 334567888888764 3332221 1111 235789999999877777554 5678988988754333333444 4
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc-EEEEEe-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY-RYVLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~-~~~l~~-~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
..+. .+++......++.+-+..+.|.+-|+.... ...+.. .....+..++..|.++.++.+-. ....|...++
T Consensus 170 ~~V~----~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~-~dg~v~~wd~ 244 (344)
T 4gqb_B 170 AQVT----CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD-ENGTVSLVDT 244 (344)
T ss_dssp SCEE----EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE-TTSEEEEEES
T ss_pred CceE----EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec-cCCcEEEEEC
Confidence 5567 888877677787777677888888876433 333321 12235778999998888777633 2456777676
Q ss_pred CCCC-cEEEEeecccCceeEEEeccCCE
Q psy5768 162 DGKK-QTILAQEIIMPIKDITLDLKFFS 188 (652)
Q Consensus 162 dg~~-~~~~~~~~~~~p~gl~lD~~~~~ 188 (652)
.... ...+. .--...+.|++.+.+.+
T Consensus 245 ~~~~~~~~~~-~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 245 KSTSCVLSSA-VHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp CC--CCEEEE-CCSSCEEEEEECSSSSC
T ss_pred CCCcEEEEEc-CCCCCEEEEEEccCCCe
Confidence 5332 33322 22345567777665544
No 238
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.16 E-value=1.5 Score=45.36 Aligned_cols=227 Identities=8% Similarity=-0.027 Sum_probs=132.3
Q ss_pred EEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCce
Q psy5768 280 FIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSV 358 (652)
Q Consensus 280 ~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~ 358 (652)
++..+....|+..++..+ . ....+.. .+-..+.+++|.+....|+... ..+.|...++........+ .....+
T Consensus 106 l~~~~~d~~v~lw~~~~~-~---~~~~~~~-~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v 179 (401)
T 4aez_A 106 VVAVALERNVYVWNADSG-S---VSALAET-DESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQTKLRTMAGHQARV 179 (401)
T ss_dssp EEEEEETTEEEEEETTTC-C---EEEEEEC-CTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred EEEEECCCeEEEeeCCCC-c---EeEeeec-CCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCCeEEEEecCCCCce
Confidence 344445555666665222 1 1122221 1234578899998666665554 4577888887654333233 333456
Q ss_pred eeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCc
Q psy5768 359 EGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGT 438 (652)
Q Consensus 359 ~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~ 438 (652)
..++++ ++ ++.+-...+.|.+.++.... ..............+++++|...+|+..... ..|...++.....
T Consensus 180 ~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~ 251 (401)
T 4aez_A 180 GCLSWN--RH-VLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWRSDGLQLASGGND---NVVQIWDARSSIP 251 (401)
T ss_dssp EEEEEE--TT-EEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTCSSE
T ss_pred EEEEEC--CC-EEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC---CeEEEccCCCCCc
Confidence 666653 44 45566667899998886322 1222222445678899999966666655443 2566666654433
Q ss_pred eEEEEcCCCCCceEEEecCCCEEEEEeC--CCCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEE-cCCCCeEE
Q psy5768 439 ESIITTDITMPNALALDHQAEKLFWGDA--RLDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWT-DWVIHAVL 513 (652)
Q Consensus 439 ~~l~~~~l~~P~glaiD~~~~~LYw~D~--~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwt-d~~~~~I~ 513 (652)
...+...-.....+++.+.+..|+.+-. ..+.|...++........+... ....++++. +.+|+.+ ....+.|.
T Consensus 252 ~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 252 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQVTSLIWSPHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SCEEEEEECSSSSEEEEEECTTTCEEE
T ss_pred cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-CcEEEEEECCCCCeEEEEeecCCCcEE
Confidence 3333333446689999988888887754 5678999998765554444432 456777775 4466655 33456666
Q ss_pred EEEccCCc
Q psy5768 514 RANKYTGE 521 (652)
Q Consensus 514 ~~~k~~g~ 521 (652)
..+..++.
T Consensus 331 v~~~~~~~ 338 (401)
T 4aez_A 331 IWSYSSSG 338 (401)
T ss_dssp EEEEETTE
T ss_pred EEecCCcc
Confidence 66655543
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.12 E-value=0.21 Score=50.03 Aligned_cols=166 Identities=10% Similarity=0.112 Sum_probs=101.0
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
|+|++ ..+.|+.++.+|+......... ..+.++.++ .++.||+.. ..+.|++++.+|...... ...
T Consensus 110 l~v~t-~~~~l~~~d~~g~~~~~~~~~~-------~~~~~~~~~-~~g~l~vgt---~~~~l~~~d~~g~~~~~~-~~~- 175 (330)
T 3hxj_A 110 LYVTS-MDGHLYAINTDGTEKWRFKTKK-------AIYATPIVS-EDGTIYVGS---NDNYLYAINPDGTEKWRF-KTN- 175 (330)
T ss_dssp EEEEC-TTSEEEEECTTSCEEEEEECSS-------CCCSCCEEC-TTSCEEEEC---TTSEEEEECTTSCEEEEE-ECS-
T ss_pred EEEEe-cCCEEEEEcCCCCEEEEEcCCC-------ceeeeeEEc-CCCEEEEEc---CCCEEEEECCCCCEeEEE-ecC-
Confidence 45554 3578889998876554444311 123334555 357788765 457899998885543333 222
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
..... .+++|. .++||++. +.|.+.+.+|+...... ........+++|+ +|.||.... ...|.+.+.+
T Consensus 176 ~~~~~----~~~~d~-~g~l~v~t---~~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~v~t~--~~gl~~~~~~ 243 (330)
T 3hxj_A 176 DAITS----AASIGK-DGTIYFGS---DKVYAINPDGTEKWNFY-AGYWTVTRPAISE-DGTIYVTSL--DGHLYAINPD 243 (330)
T ss_dssp SCCCS----CCEECT-TCCEEEES---SSEEEECTTSCEEEEEC-CSSCCCSCCEECT-TSCEEEEET--TTEEEEECTT
T ss_pred CCcee----eeEEcC-CCEEEEEe---CEEEEECCCCcEEEEEc-cCCcceeceEECC-CCeEEEEcC--CCeEEEECCC
Confidence 23455 788874 67788876 77888887776544332 2235678899997 688988864 3477777666
Q ss_pred CCCcEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 163 GKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 163 g~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
|.....+. ..-..+..+++| .+++||+...+|
T Consensus 244 g~~~~~~~-~~~~~~~~~~~~-~~g~l~v~t~~g 275 (330)
T 3hxj_A 244 GTEKWRFK-TGKRIESSPVIG-NTDTIYFGSYDG 275 (330)
T ss_dssp SCEEEEEE-CSSCCCSCCEEC-TTSCEEEECTTC
T ss_pred CCEeEEee-CCCCccccceEc-CCCeEEEecCCC
Confidence 65443322 222234556666 356787766653
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.09 E-value=1 Score=44.74 Aligned_cols=181 Identities=12% Similarity=0.145 Sum_probs=105.6
Q ss_pred CCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCc
Q psy5768 325 RKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKP 404 (652)
Q Consensus 325 ~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P 404 (652)
.+.||+... .+.|++++.+|...............+++|. .++||+.. ..+.|.+++..+. ...... ......
T Consensus 107 ~~~l~v~t~-~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt-~~~~l~~~d~~g~---~~~~~~-~~~~~~ 179 (330)
T 3hxj_A 107 EDILYVTSM-DGHLYAINTDGTEKWRFKTKKAIYATPIVSE-DGTIYVGS-NDNYLYAINPDGT---EKWRFK-TNDAIT 179 (330)
T ss_dssp TTEEEEECT-TSEEEEECTTSCEEEEEECSSCCCSCCEECT-TSCEEEEC-TTSEEEEECTTSC---EEEEEE-CSSCCC
T ss_pred CCEEEEEec-CCEEEEEcCCCCEEEEEcCCCceeeeeEEcC-CCEEEEEc-CCCEEEEECCCCC---EeEEEe-cCCCce
Confidence 677777653 4678888877543222222223455677775 44566654 4477888876531 222222 223455
Q ss_pred eEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEE
Q psy5768 405 RGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL 484 (652)
Q Consensus 405 ~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l 484 (652)
.++++|+ .|.||++. ..|.+.+.+|...... ......+.++++|.. ++||.+.. .+.|..++.+|.....+
T Consensus 180 ~~~~~d~-~g~l~v~t-----~~l~~~d~~g~~~~~~-~~~~~~~~~~~~~~~-g~l~v~t~-~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 180 SAASIGK-DGTIYFGS-----DKVYAINPDGTEKWNF-YAGYWTVTRPAISED-GTIYVTSL-DGHLYAINPDGTEKWRF 250 (330)
T ss_dssp SCCEECT-TCCEEEES-----SSEEEECTTSCEEEEE-CCSSCCCSCCEECTT-SCEEEEET-TTEEEEECTTSCEEEEE
T ss_pred eeeEEcC-CCEEEEEe-----CEEEEECCCCcEEEEE-ccCCcceeceEECCC-CeEEEEcC-CCeEEEECCCCCEeEEe
Confidence 6778886 67888876 2777777544322111 112234678888854 57887754 45788888777655444
Q ss_pred ecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEE
Q psy5768 485 SKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVY 524 (652)
Q Consensus 485 ~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~ 524 (652)
.... ..+.+++++ ++.||.... .+.|+++++ +|+...
T Consensus 251 ~~~~-~~~~~~~~~~~g~l~v~t~-~ggl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 251 KTGK-RIESSPVIGNTDTIYFGSY-DGHLYAINP-DGTEKW 288 (330)
T ss_dssp ECSS-CCCSCCEECTTSCEEEECT-TCEEEEECT-TSCEEE
T ss_pred eCCC-CccccceEcCCCeEEEecC-CCCEEEECC-CCcEEE
Confidence 3322 233456666 678887764 457888886 565433
No 241
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.05 E-value=1.4 Score=50.03 Aligned_cols=197 Identities=17% Similarity=0.139 Sum_probs=117.5
Q ss_pred eEEEEEEEcCCCeEEEeeccc----ccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCC------------
Q psy5768 315 NIIELSYDYKRKTLFYSDIQK----GTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNND------------ 377 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~----~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~------------ 377 (652)
...++.+.+..++|.++.... ..|+..++++....... ... ...+++..+. +.||++....
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 355778888888877764332 35888888765432221 211 1246677666 7888876432
Q ss_pred -CeEEEEEcCCCCCccEEEEEeCCCC---CceEEEEeCCCCEEEEEecCC--CCCceEEEeecCC--C-ceEEEEcCCCC
Q psy5768 378 -ATINKIDLDSPKAQRIVVVRLGQHD---KPRGIDIDSCDSRIYWTNWNS--HLPSIQRAFFSGF--G-TESIITTDITM 448 (652)
Q Consensus 378 -~~I~~~~~~~~~~~~~~~~~~~~~~---~P~~Iavdp~~g~Lywtd~~~--~~~~I~r~~ldG~--~-~~~l~~~~l~~ 448 (652)
.+|.+.++.+... ...++. .... .-.+++++|...+|+++.... ....|+..++++. . .+.|.. ....
T Consensus 242 ~~~v~~~~lgt~~~-~~~lv~-~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~ 318 (741)
T 1yr2_A 242 NQTVWLHRLGTPQS-ADQPVF-ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP-DLKA 318 (741)
T ss_dssp CCEEEEEETTSCGG-GCEEEE-CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-SSSS
T ss_pred CCEEEEEECCCCch-hCEEEe-ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-CCCc
Confidence 3588888754221 122332 2222 246889999888888876532 2348999888876 4 444443 2222
Q ss_pred CceEEEecCCCEEEEEeC---CCCeEEEEecCCC--ceEEEecCCCCceeEEEEeCCEEEEEcCCCC--eEEEEEc
Q psy5768 449 PNALALDHQAEKLFWGDA---RLDKIERCDYDGT--NRIVLSKISPLHPFDMAVYGEFIFWTDWVIH--AVLRANK 517 (652)
Q Consensus 449 P~glaiD~~~~~LYw~D~---~~~~I~~~~ldG~--~~~~l~~~~~~~p~glav~~~~lYwtd~~~~--~I~~~~k 517 (652)
.... +++.+++||+.-. ...+|..+++++. ..+.++........++++++++|+++-...+ .|+.++.
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEET
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 2222 3567899998743 3567999999873 4455554332334567778888888764443 5666664
No 242
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.01 E-value=0.65 Score=52.89 Aligned_cols=193 Identities=9% Similarity=0.085 Sum_probs=114.4
Q ss_pred cCCCeEEEeecc----cccEEEEecc---CCcceEEeecc-------CceeeeEEEccCCEEEEEeCCC----CeEEEEE
Q psy5768 323 YKRKTLFYSDIQ----KGTINSVFFN---GSNHRVLLERQ-------GSVEGLAYEYVHNYLYWTCNND----ATINKID 384 (652)
Q Consensus 323 ~~~~~lywsd~~----~~~I~~~~~~---g~~~~~i~~~~-------~~~~glAvDw~~~~LYwtd~~~----~~I~~~~ 384 (652)
+..+++|++-.. ...|++.... +...++++... ....++++.+.++.|.++.... ..|.+.+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 445677776432 2457888776 55556654211 1466788998999887765432 3588899
Q ss_pred cCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC-----------CCceEEEeecCCCc-eEEEEcCCC---CC
Q psy5768 385 LDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH-----------LPSIQRAFFSGFGT-ESIITTDIT---MP 449 (652)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~-----------~~~I~r~~ldG~~~-~~l~~~~l~---~P 449 (652)
+.+.. .... .... ....+++..|. ..||++..... ..+|++..+.+... ..++...-. +-
T Consensus 196 l~tg~--~~~~-~~~~-~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 196 VADGK--PLAD-ELKW-VKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp TTTCC--EEEE-EEEE-EESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred CCCCC--CCCc-cCCC-ceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 87643 1111 1111 11246888898 88888764322 23588888754432 233333222 34
Q ss_pred ceEEEecCCCEEEEEeC----CCCeEEEEecCCC--c-eEEEecCCCCceeEEEEeCCEEEEEcCC---CCeEEEEEccC
Q psy5768 450 NALALDHQAEKLFWGDA----RLDKIERCDYDGT--N-RIVLSKISPLHPFDMAVYGEFIFWTDWV---IHAVLRANKYT 519 (652)
Q Consensus 450 ~glaiD~~~~~LYw~D~----~~~~I~~~~ldG~--~-~~~l~~~~~~~p~glav~~~~lYwtd~~---~~~I~~~~k~~ 519 (652)
.++++.++++.|++.-. ....|+.+++++. . .+.+.......-..+.-++++||+.... +..|++++..+
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 57888888888887653 2458999999876 4 4455443212222234568888776432 45799888766
Q ss_pred C
Q psy5768 520 G 520 (652)
Q Consensus 520 g 520 (652)
+
T Consensus 351 ~ 351 (741)
T 1yr2_A 351 S 351 (741)
T ss_dssp S
T ss_pred C
Confidence 4
No 243
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.97 E-value=1 Score=44.93 Aligned_cols=200 Identities=12% Similarity=0.030 Sum_probs=113.5
Q ss_pred ceEEEEEEEcCCC-eEEEeecccccEEEEec-cCCcceEEee--ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCC
Q psy5768 314 KNIIELSYDYKRK-TLFYSDIQKGTINSVFF-NGSNHRVLLE--RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPK 389 (652)
Q Consensus 314 ~~~~~v~~D~~~~-~lywsd~~~~~I~~~~~-~g~~~~~i~~--~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~ 389 (652)
..+.+++|.+..+ .|+... ..+.|...++ ++.....+.. ....+..|++.. ++.|+ +-...+.|.+.++....
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLI-AASWDGLIEVIDPRNYG 133 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEE-EEETTSEEEEECHHHHT
T ss_pred CceEEEEECCCCCcEEEEEc-CCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccccc
Confidence 5578899998766 566555 4578988888 7654433334 555788999998 55554 55567888887765310
Q ss_pred Ccc----E-EEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecC-CCc-eEEEEcC-CCCCceEEEec-CCCE
Q psy5768 390 AQR----I-VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSG-FGT-ESIITTD-ITMPNALALDH-QAEK 460 (652)
Q Consensus 390 ~~~----~-~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG-~~~-~~l~~~~-l~~P~glaiD~-~~~~ 460 (652)
... . .+........+.+++++|.. |+..... ..|...++.. ... ....... -..+..+++.+ .++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN---SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG 208 (342)
T ss_dssp TBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST---TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE
T ss_pred cccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC---CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE
Confidence 000 0 01111233577889998854 5555433 3666666665 222 2222222 23467888887 6666
Q ss_pred EEEEeCCCCeEEEEecCCC------ceEEEecCCCC---------ceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceE
Q psy5768 461 LFWGDARLDKIERCDYDGT------NRIVLSKISPL---------HPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEV 523 (652)
Q Consensus 461 LYw~D~~~~~I~~~~ldG~------~~~~l~~~~~~---------~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~ 523 (652)
|+.+. ..+.|...+++.. .....+..... ...++++. +.+|+ +-...+.|...+..+++..
T Consensus 209 l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 209 YACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEETTSCEEEEETTTTEEE
T ss_pred EEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE-EecCCceEEEEcCccHhHh
Confidence 66554 4567777666543 22222222211 45666665 33444 4445566776776666543
No 244
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=95.93 E-value=0.06 Score=58.58 Aligned_cols=111 Identities=15% Similarity=0.180 Sum_probs=79.3
Q ss_pred CCCCeeEEEEECCCCEEEEEeccC-------------------CcceEEEEEcCCCc-------cEEEEeCC--------
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTK-------------------QVVTIEMAFMDGTK-------RETVVSQK-------- 81 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~-------------------~~~~I~~~~~dgs~-------~~~v~~~~-------- 81 (652)
.+.+|.+|+++|.+++||++=.+. ..+.|+|+..++.. .+.++..+
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 456899999999999999974111 13679999986532 34444221
Q ss_pred ------------CcCCccCCCCcEEEEccCCcEEE-EeCC-----------CCEEEEEEcC-CCcEEEEEeCCCCCceeE
Q psy5768 82 ------------KYPAVTACNLHIAVDWIAQNIYW-SDPK-----------ENVIEVARLT-GQYRYVLISGGVDQPSAL 136 (652)
Q Consensus 82 ------------~~~~p~~~~~~lavDw~~~~lY~-~d~~-----------~~~I~v~~~d-g~~~~~l~~~~~~~P~~i 136 (652)
.+..|. +|++|. .++||+ +|.. .+.+.+.+.+ |+.++++.......|.+|
T Consensus 462 ~~~g~~~~~~~~~fnsPD----nL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGi 536 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPD----GLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp GGGCCTTCCTTTCCCCEE----EEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEE
T ss_pred cccCccCccccCccCCCC----ceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCC
Confidence 156688 999996 688999 8864 3378888885 555544432345689999
Q ss_pred EEcCCCCeEEEEecC
Q psy5768 137 AVDPESGYLFWSESG 151 (652)
Q Consensus 137 avd~~~g~lywtd~~ 151 (652)
++.|....||++-.+
T Consensus 537 afSPD~ktLfV~vQH 551 (592)
T 4a9v_A 537 SFSPDQKTLFVGIQH 551 (592)
T ss_dssp EECTTSSEEEEEEES
T ss_pred EECCCCCEEEEEEeC
Confidence 999999999998643
No 245
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=95.92 E-value=0.0052 Score=68.07 Aligned_cols=48 Identities=31% Similarity=0.673 Sum_probs=41.0
Q ss_pred eccCceeeccC-CcccCcccccCCCceeeccCeecCCccCCCCCCCCCCCCCCCCCCCC
Q psy5768 573 SCFTGKVLMED-NRSCTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCA 630 (652)
Q Consensus 573 ~Cp~g~~l~~d-~~C~~~~~~C~~~~f~C~~g~Ci~~~~~Cd~~~dC~d~sde~~~~C~ 630 (652)
.|++| +| ..|.. |.+.+|.|.++.|++..+.|||..||.||+||.. |.
T Consensus 228 dC~d~----sDE~~C~~----c~~~~~~C~~~~C~~~~~~cdG~~dC~~gsDE~~--C~ 276 (565)
T 2xrc_A 228 DCGDQ----SDELCCKA----CQGKGFHCKSGVCIPSQYQCNGEVDCITGEDEVG--CA 276 (565)
T ss_dssp CSSSS----SSSSSBSS----CSSSCEEETTTEEECGGGTTSSSCCSSSCTTSSS--CC
T ss_pred cCCCC----cccccccc----cCCCceecCCCcccCccccCCCcccCCCCccccC--cC
Confidence 47777 56 55643 8889999999999999999999999999999976 64
No 246
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.89 E-value=0.86 Score=47.14 Aligned_cols=173 Identities=16% Similarity=0.119 Sum_probs=101.3
Q ss_pred EecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCC-ccEEEEeCCCc
Q psy5768 5 VSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT-KRETVVSQKKY 83 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs-~~~~v~~~~~~ 83 (652)
++....+.|.+++++.......... ....+.++++++.+..|+-.. ..+.|+.+++... ....+ ... .
T Consensus 113 ~~~~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s---~d~~i~iwd~~~~~~~~~~-~~h-~ 181 (420)
T 3vl1_A 113 ILGTTEGDIKVLDSNFNLQREIDQA------HVSEITKLKFFPSGEALISSS---QDMQLKIWSVKDGSNPRTL-IGH-R 181 (420)
T ss_dssp EEEETTSCEEEECTTSCEEEEETTS------SSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCCCEEE-ECC-S
T ss_pred EEEECCCCEEEEeCCCcceeeeccc------ccCccEEEEECCCCCEEEEEe---CCCeEEEEeCCCCcCceEE-cCC-C
Confidence 3334567788888886655554321 336889999999877777655 5688999998744 33443 444 4
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCC------------------------CCCceeEEEc
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG------------------------VDQPSALAVD 139 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~------------------------~~~P~~iavd 139 (652)
..+. ++++...++.|+ +-+..+.|.+.++........+... ......++++
T Consensus 182 ~~v~----~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 182 ATVT----DIAIIDRGRNVL-SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp SCEE----EEEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred CcEE----EEEEcCCCCEEE-EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 5577 888887555554 4445678888887654333333211 1233445556
Q ss_pred CCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeec-ccCceeEEEeccCC-EEEEEeCC
Q psy5768 140 PESGYLFWSESGKIPLIARAGLDGKKQTILAQEI-IMPIKDITLDLKFF-SAFYRNLS 195 (652)
Q Consensus 140 ~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~-~~~p~gl~lD~~~~-~ly~~d~~ 195 (652)
|...+|+... ..+.|...++........+... -.....+++++.+. .|+....+
T Consensus 257 ~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 257 TYGKYVIAGH--VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp CTTEEEEEEE--TTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCEEEEEc--CCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence 6443444433 2446777776544333322222 34567788877666 45444444
No 247
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.82 E-value=1.4 Score=44.37 Aligned_cols=179 Identities=12% Similarity=0.073 Sum_probs=103.5
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECC--CCEEEEEeccCCcceEEEEEcCCC--ccEEEEe
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPV--KGKMFWSNVTKQVVTIEMAFMDGT--KRETVVS 79 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~lyw~d~~~~~~~I~~~~~dgs--~~~~v~~ 79 (652)
+++....+.|.+++++......+....+ .-..+..+++++. ...|+... ..+.|..+++... .....+.
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAV----HSASVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECC----CSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEECCTTSCCCEEEEE
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecC----CCcceEEEEeCCCCCCCEEEEec---CCCcEEEEecCCCCceeeEEec
Confidence 3333456778888887664322222111 3357899999998 67777665 5678888887754 2233333
Q ss_pred CCCcCCccCCCCcEEEEcc------------CCcEEEEeCCCCEEEEEEcCCCc-EEEE---EeCCCCCceeEEEcCCC-
Q psy5768 80 QKKYPAVTACNLHIAVDWI------------AQNIYWSDPKENVIEVARLTGQY-RYVL---ISGGVDQPSALAVDPES- 142 (652)
Q Consensus 80 ~~~~~~p~~~~~~lavDw~------------~~~lY~~d~~~~~I~v~~~dg~~-~~~l---~~~~~~~P~~iavd~~~- 142 (652)
.. ...+. .+++... .++++++-...+.|.+.++.... ...+ +.........+++.|..
T Consensus 145 ~~-~~~v~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 145 AH-AIGVN----SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp CC-TTCEE----EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred CC-CCceE----EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 33 34455 6666653 35566665567788888876432 2112 22223567799999973
Q ss_pred -CeEEEEecCCCCeEEEEeCCCCC---cEEEEee--cccCceeEEEeccCCEEEEEeCC
Q psy5768 143 -GYLFWSESGKIPLIARAGLDGKK---QTILAQE--IIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 143 -g~lywtd~~~~~~I~~~~ldg~~---~~~~~~~--~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
|.++.+-. ....|...+++... ...+... .-.....+++++.+..|+....+
T Consensus 220 ~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 220 LRSYLASVS-QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp SSEEEEEEE-TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred CCCeEEEEe-CCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 44444432 24456665555432 2222221 12356788888888777777666
No 248
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.81 E-value=0.17 Score=53.47 Aligned_cols=175 Identities=10% Similarity=0.083 Sum_probs=104.7
Q ss_pred CCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC-cCCc
Q psy5768 8 PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK-YPAV 86 (652)
Q Consensus 8 ~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~-~~~p 86 (652)
...+.|.++|++......+....+ .-..+.+|+|+|.++.++++- ...+.|..+++.+.....+..... ....
T Consensus 139 s~dg~i~lWd~~~~~~~~~~~~~g----H~~~V~~l~f~p~~~~~l~s~--s~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 212 (435)
T 4e54_B 139 SKGGDIMLWNFGIKDKPTFIKGIG----AGGSITGLKFNPLNTNQFYAS--SMEGTTRLQDFKGNILRVFASSDTINIWF 212 (435)
T ss_dssp ETTSCEEEECSSCCSCCEEECCCS----SSCCCCEEEECSSCTTEEEEE--CSSSCEEEEETTSCEEEEEECCSSCSCCC
T ss_pred eCCCEEEEEECCCCCceeEEEccC----CCCCEEEEEEeCCCCCEEEEE--eCCCEEEEeeccCCceeEEeccCCCCccE
Confidence 356788899887554434433222 235789999998766555565 567889999998776555544331 1123
Q ss_pred cCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCC-CC
Q psy5768 87 TACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-KK 165 (652)
Q Consensus 87 ~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg-~~ 165 (652)
. .++++.. +++.++-...+.|.+.+++|+....+. .-......+++.|....++.+-.. ...|...++.. ..
T Consensus 213 ~----~~~~~~~-~~~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~-d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 213 C----SLDVSAS-SRMVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASV-DQTVKIWDLRQVRG 285 (435)
T ss_dssp C----CEEEETT-TTEEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEET-TSBCCEEETTTCCS
T ss_pred E----EEEECCC-CCEEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecC-cceeeEEecccccc
Confidence 4 7788764 455556566788999999886543322 223456789999977767665332 33444444432 11
Q ss_pred cEEEEee-c-ccCceeEEEeccCCEEEEEeCC
Q psy5768 166 QTILAQE-I-IMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 166 ~~~~~~~-~-~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
...+... . -...+.+++++.+.+|+-...|
T Consensus 286 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D 317 (435)
T 4e54_B 286 KASFLYSLPHRHPVNAACFSPDGARLLTTDQK 317 (435)
T ss_dssp SSCCSBCCBCSSCEEECCBCTTSSEEEEEESS
T ss_pred cceEEEeeeccccccceeECCCCCeeEEEcCC
Confidence 1111111 1 2345677787777777666666
No 249
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.80 E-value=2 Score=43.84 Aligned_cols=208 Identities=11% Similarity=-0.033 Sum_probs=117.8
Q ss_pred ceEEEEEEEcC----C---CeEEEeecccccEEEEeccCCcc-----eEEeec------cCceeeeEEE----ccCCE-E
Q psy5768 314 KNIIELSYDYK----R---KTLFYSDIQKGTINSVFFNGSNH-----RVLLER------QGSVEGLAYE----YVHNY-L 370 (652)
Q Consensus 314 ~~~~~v~~D~~----~---~~lywsd~~~~~I~~~~~~g~~~-----~~i~~~------~~~~~glAvD----w~~~~-L 370 (652)
..+..++|.+. . ..|+.. ...+.|...++..... ...+.. ...+..+++. +.++. |
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATT-SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEE-ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEE-cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEE
Confidence 45778888877 4 444444 4457788777665442 222222 2678889998 77777 5
Q ss_pred EEEeCCCCeEEEEEcCC------CCCcc---E-EEEE-----eCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecC
Q psy5768 371 YWTCNNDATINKIDLDS------PKAQR---I-VVVR-----LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSG 435 (652)
Q Consensus 371 Ywtd~~~~~I~~~~~~~------~~~~~---~-~~~~-----~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG 435 (652)
+.+ ...+.|.+.++.. ...-. . .+.. ......+.+++++|.. +|+..... +.|...++..
T Consensus 142 ~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d---g~i~i~d~~~ 216 (397)
T 1sq9_A 142 VAT-DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN---GTVQISELST 216 (397)
T ss_dssp EEE-ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT---SEEEEEETTT
T ss_pred EEE-eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC---CcEEEEECCC
Confidence 544 4567787777754 21111 1 2221 2235678899999965 44443322 3666666654
Q ss_pred CCceEEEEc---C---CCCCceEEEecCCCEEEEEeCC--CCeEEEEecCCCceEEEecC-------------CCCceeE
Q psy5768 436 FGTESIITT---D---ITMPNALALDHQAEKLFWGDAR--LDKIERCDYDGTNRIVLSKI-------------SPLHPFD 494 (652)
Q Consensus 436 ~~~~~l~~~---~---l~~P~glaiD~~~~~LYw~D~~--~~~I~~~~ldG~~~~~l~~~-------------~~~~p~g 494 (652)
......+.. . -..+..+++++.+..|+.+... .+.|...++........+.. ......+
T Consensus 217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 217 LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 296 (397)
T ss_dssp TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE
T ss_pred CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEE
Confidence 332222222 1 3456789998887777765432 16788888865544433332 2244567
Q ss_pred EEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 495 MAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 495 lav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
+++. .+.++.+-...+.|...+..+++....+.
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 7775 23333444456777777777776555554
No 250
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=95.79 E-value=0.0045 Score=44.32 Aligned_cols=20 Identities=30% Similarity=0.786 Sum_probs=18.3
Q ss_pred CCCCCCeeecCCCCcccCCC
Q psy5768 632 RDCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~~~~Ci~~~~ 651 (652)
..|++++|+|.||+||+.+|
T Consensus 5 ~~C~~~~F~C~nG~CIp~~~ 24 (52)
T 2m0p_A 5 ASCLDTQYTCDNHQCISKNW 24 (52)
T ss_dssp CSSCSSEEECTTCCEEETTS
T ss_pred CCCCCCceECCCCCEEecCc
Confidence 57899999999999999876
No 251
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.74 E-value=1.9 Score=43.16 Aligned_cols=103 Identities=8% Similarity=0.034 Sum_probs=68.6
Q ss_pred CCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEE
Q psy5768 37 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVAR 116 (652)
Q Consensus 37 ~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~ 116 (652)
-..+.+|++++....|+... ..+.|..+++........+... ...+. ++++...++.| ++-...+.|.+.+
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~h-~~~v~----~~~~~~~~~~l-~s~~~dg~i~iwd 102 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCS---KDSSASVWYSLNGERLGTLDGH-TGTIW----SIDVDCFTKYC-VTGSADYSIKLWD 102 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEE---SSSCEEEEETTTCCEEEEECCC-SSCEE----EEEECTTSSEE-EEEETTTEEEEEE
T ss_pred eceEEEEEEcCCCCEEEEEe---CCCEEEEEeCCCchhhhhhhhc-CCcEE----EEEEcCCCCEE-EEEeCCCeEEEEE
Confidence 35789999999877777665 5678888887654433334444 44566 78877644444 4444678899999
Q ss_pred cCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEe
Q psy5768 117 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 149 (652)
Q Consensus 117 ~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd 149 (652)
++.......+. .-..+..+++.|...+|+.+.
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 134 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAIL 134 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEec
Confidence 87654444444 346788899998665655543
No 252
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.69 E-value=1.5 Score=44.16 Aligned_cols=175 Identities=9% Similarity=0.000 Sum_probs=98.3
Q ss_pred CCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECC--CCEEEEEeccCCcceEEEEEcCCCc--cEEEEeCCCc
Q psy5768 8 PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPV--KGKMFWSNVTKQVVTIEMAFMDGTK--RETVVSQKKY 83 (652)
Q Consensus 8 ~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~lyw~d~~~~~~~I~~~~~dgs~--~~~v~~~~~~ 83 (652)
...+.|+++++++.....+....+ .-..+.+|++.+. ...|+-.. ..+.|..+++.... ........ .
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~-~ 101 (379)
T 3jrp_A 30 SSDKTIKIFEVEGETHKLIDTLTG----HEGPVWRVDWAHPKFGTILASCS---YDGKVLIWKEENGRWSQIAVHAVH-S 101 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECC----CSSCEEEEEECCGGGCSEEEEEE---TTSCEEEEEEETTEEEEEEEECCC-S
T ss_pred ECCCcEEEEecCCCcceeeeEecC----CCCcEEEEEeCCCCCCCEEEEec---cCCEEEEEEcCCCceeEeeeecCC-C
Confidence 346778888886443322222111 2357889999766 66676655 56788888877653 22222323 3
Q ss_pred CCccCCCCcEEEEccC-CcEEEEeCCCCEEEEEEcCCC--cEEEEEeCCCCCceeEEEcCC------------CCeEEEE
Q psy5768 84 PAVTACNLHIAVDWIA-QNIYWSDPKENVIEVARLTGQ--YRYVLISGGVDQPSALAVDPE------------SGYLFWS 148 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~-~~lY~~d~~~~~I~v~~~dg~--~~~~l~~~~~~~P~~iavd~~------------~g~lywt 148 (652)
..+. .+++.... +++.++-...+.|.+.++... .....+.........++..|. ++.++.+
T Consensus 102 ~~v~----~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (379)
T 3jrp_A 102 ASVN----SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 177 (379)
T ss_dssp SCEE----EEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEE
T ss_pred cceE----EEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEE
Confidence 4566 77777652 445555556788999988754 233333444456788899885 3444444
Q ss_pred ecCCCCeEEEEeCCCCCc-EEEEee---cccCceeEEEecc---CCEEEEEeCC
Q psy5768 149 ESGKIPLIARAGLDGKKQ-TILAQE---IIMPIKDITLDLK---FFSAFYRNLS 195 (652)
Q Consensus 149 d~~~~~~I~~~~ldg~~~-~~~~~~---~~~~p~gl~lD~~---~~~ly~~d~~ 195 (652)
-. ....|...++..... ..+... .-.....+++.+. .+.|+....+
T Consensus 178 ~~-~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 178 GG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred Ee-CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 32 234566655543322 222211 1235677788776 4555555555
No 253
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.69 E-value=3.9 Score=46.36 Aligned_cols=164 Identities=7% Similarity=0.079 Sum_probs=90.8
Q ss_pred EEEEEEEcCCCeE-EEeecc--cccEEEEeccCCc-------ceEEe-eccC------ceeeeEEEccCCEEE-EEeC--
Q psy5768 316 IIELSYDYKRKTL-FYSDIQ--KGTINSVFFNGSN-------HRVLL-ERQG------SVEGLAYEYVHNYLY-WTCN-- 375 (652)
Q Consensus 316 ~~~v~~D~~~~~l-ywsd~~--~~~I~~~~~~g~~-------~~~i~-~~~~------~~~glAvDw~~~~LY-wtd~-- 375 (652)
+..+++.+..+.+ ++.+.. ...|+.+++++.. ...+. +.-. .+...++.+.++.|+ |...
T Consensus 262 ~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~ 341 (740)
T 4a5s_A 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE 341 (740)
T ss_dssp EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT
T ss_pred EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC
Confidence 4566777665533 344432 2357777776543 22222 1111 145778888888887 7643
Q ss_pred CCCeEEEEEcCCCCCccEEEEEeCCCCCceEE-EEeCCCCEEEEEecC----CCCCceEEEeecCCCceEEEEcCC----
Q psy5768 376 NDATINKIDLDSPKAQRIVVVRLGQHDKPRGI-DIDSCDSRIYWTNWN----SHLPSIQRAFFSGFGTESIITTDI---- 446 (652)
Q Consensus 376 ~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~I-avdp~~g~Lywtd~~----~~~~~I~r~~ldG~~~~~l~~~~l---- 446 (652)
+...|..+++++.. .+. ++. .......+ ..| .+.||++... .....|+++.++|...+..++..+
T Consensus 342 G~~~l~~~~~~~~~--~~~-lT~-g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~ 415 (740)
T 4a5s_A 342 GYRHICYFQIDKKD--CTF-ITK-GTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPER 415 (740)
T ss_dssp SCEEEEEEETTCSS--CEE-SCC-SSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTT
T ss_pred CceEEEEEECCCCc--eEe-ccc-CCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCC
Confidence 33568888887643 222 221 12222333 355 7889998765 223489999999876543443222
Q ss_pred CCCceEEEecCCCEEEEEeC--CCCeEEEEecCCCceEEEe
Q psy5768 447 TMPNALALDHQAEKLFWGDA--RLDKIERCDYDGTNRIVLS 485 (652)
Q Consensus 447 ~~P~glaiD~~~~~LYw~D~--~~~~I~~~~ldG~~~~~l~ 485 (652)
......++.+.++.+...-. ....+..++.++.....++
T Consensus 416 ~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l 456 (740)
T 4a5s_A 416 CQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL 456 (740)
T ss_dssp BCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 23346777777775544422 2345677777655444443
No 254
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.67 E-value=0.51 Score=53.33 Aligned_cols=194 Identities=15% Similarity=0.084 Sum_probs=116.2
Q ss_pred CCCeEEEeecc----cccEEEEeccCCcceEEeeccC-------ceeeeEEEccCCEEEEEeCCC----CeEEEEEcCCC
Q psy5768 324 KRKTLFYSDIQ----KGTINSVFFNGSNHRVLLERQG-------SVEGLAYEYVHNYLYWTCNND----ATINKIDLDSP 388 (652)
Q Consensus 324 ~~~~lywsd~~----~~~I~~~~~~g~~~~~i~~~~~-------~~~glAvDw~~~~LYwtd~~~----~~I~~~~~~~~ 388 (652)
..+++|++-.. ...|++....+...++++.... ...++++.+.++.|.++.... ..|.+.++.+.
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG 157 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence 45677776543 2457888877766666663211 467889999999887765433 47999998763
Q ss_pred CCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC----------CCceEEEeecCCCce-EEEEcCC---CCCceEEE
Q psy5768 389 KAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH----------LPSIQRAFFSGFGTE-SIITTDI---TMPNALAL 454 (652)
Q Consensus 389 ~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~----------~~~I~r~~ldG~~~~-~l~~~~l---~~P~glai 454 (652)
. ......... ....+++..|....||++..... ..+|++..+++...+ .++...- .+-.++++
T Consensus 158 ~--~~~~~~~~~-~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 158 E--WSKVDVIEG-GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp C--BCSSCCBSC-CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred C--CcCCcccCc-ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 2 110001111 12268899998888888876431 235898888765532 3333221 23458889
Q ss_pred ecCCCEEEEEeCC---CCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEE-EcCC--CCeEEEEEccCCc
Q psy5768 455 DHQAEKLFWGDAR---LDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFW-TDWV--IHAVLRANKYTGE 521 (652)
Q Consensus 455 D~~~~~LYw~D~~---~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYw-td~~--~~~I~~~~k~~g~ 521 (652)
++++++|++.-.. ...|+.++..+...+.+.......-..+.-.++ +|+ +++. ...|++++..+++
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 9999988876432 347777777555555554433122122223455 655 4443 5689888876664
No 255
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.67 E-value=2 Score=42.88 Aligned_cols=119 Identities=8% Similarity=-0.038 Sum_probs=68.0
Q ss_pred CCeeEEEEECCCCEEEEEeccCC---cceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccC--CcEEEEeCCCCEE
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQ---VVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIA--QNIYWSDPKENVI 112 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~---~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~--~~lY~~d~~~~~I 112 (652)
..+.+|+++|.+.+++.+- .. .+.|+.++++......+...+....+. .+++.... +++.++-...+.|
T Consensus 19 ~~v~~~~~~p~~~~l~~~~--s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMG--NFARGTGVIQLYEIQHGDLKLLREIEKAKPIK----CGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp SCEEEEEECTTSSEEEEEE--C--CCCEEEEEEEECSSSEEEEEEEEESSCEE----EEECTTCCTTTCCEEEEETTSCE
T ss_pred CceEEEEEcCCCceEEEec--CccCCCcEEEEEeCCCCcccceeeecccCcEE----EEEEcCCCCCCceEEEecCCCeE
Confidence 5789999999887777654 33 678888888865433332211033455 66666542 3555555567888
Q ss_pred EEEEcCCCc-EEEEEeCCCCCceeE------EEcCCCCeEEEEecCCCCeEEEEeCCCC
Q psy5768 113 EVARLTGQY-RYVLISGGVDQPSAL------AVDPESGYLFWSESGKIPLIARAGLDGK 164 (652)
Q Consensus 113 ~v~~~dg~~-~~~l~~~~~~~P~~i------avd~~~g~lywtd~~~~~~I~~~~ldg~ 164 (652)
.+.+++... ....+.........+ ++.|...+|+.... ...|...++...
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~--d~~i~vwd~~~~ 149 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR--DGTVKVWDPRQK 149 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET--TSCEEEECTTSC
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC--CCeEEEEeCCCC
Confidence 888877543 222233223344555 34554445554432 345666666543
No 256
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.64 E-value=2.3 Score=43.34 Aligned_cols=151 Identities=9% Similarity=0.041 Sum_probs=89.8
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCC--cEEEEeCCCCEEE
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQ--NIYWSDPKENVIE 113 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~--~lY~~d~~~~~I~ 113 (652)
.-..+.++++.+.++.++.+- ...+.|..+++........+.. ...+. .+++...+. .+.++-...+.|.
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSS--SFDKTLKVWDTNTLQTADVFNF--EETVY----SHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEE--ETTSEEEEEETTTTEEEEEEEC--SSCEE----EEEECSSCSSCCEEEEEESSSSEE
T ss_pred CCCcEEEEEEccCCCcEEEEE--eCCCeEEEeeCCCCccceeccC--CCcee----eeEeecCCCCCcEEEEEcCCCeEE
Confidence 345789999999555555554 4568899999886644444332 23344 666655433 3555555677888
Q ss_pred EEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCC-cEEEE---------------eecccCc
Q psy5768 114 VARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILA---------------QEIIMPI 177 (652)
Q Consensus 114 v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~-~~~~~---------------~~~~~~p 177 (652)
+.++........+.........+++.|...+|+.+-. ..+.|...++.... ....+ ...-..+
T Consensus 170 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 170 LCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATAS-ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp EEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEE-TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred EEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEc-CCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 8888754433333333456789999997776665533 24566666654332 11111 0112346
Q ss_pred eeEEEeccCCEEEEEeCC
Q psy5768 178 KDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 178 ~gl~lD~~~~~ly~~d~~ 195 (652)
..+++++.+..|+....+
T Consensus 249 ~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp EEEEECTTSSEEEEEETT
T ss_pred eEEEEcCCCCEEEEecCC
Confidence 777887777677666666
No 257
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.53 E-value=2.3 Score=42.78 Aligned_cols=174 Identities=7% Similarity=-0.042 Sum_probs=105.3
Q ss_pred EecCCCCeEEEEecCCC-eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCc
Q psy5768 5 VSSPTQSKIVVCNLEGE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY 83 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~ 83 (652)
++....+.|.++|+... ...++.. .-..+.+++++|....++-. ...+.|..+++........+... .
T Consensus 158 ~s~s~d~~i~~wd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~sg---~~d~~v~~wd~~~~~~~~~~~~h-~ 226 (340)
T 1got_B 158 VTSSGDTTCALWDIETGQQTTTFTG-------HTGDVMSLSLAPDTRLFVSG---ACDASAKLWDVREGMCRQTFTGH-E 226 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTTCSEEEEECCC-S
T ss_pred EEEECCCcEEEEECCCCcEEEEEcC-------CCCceEEEEECCCCCEEEEE---eCCCcEEEEECCCCeeEEEEcCC-c
Confidence 34445678888887644 3444433 23578999999876655544 36788988887654433334444 4
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeC-C-CCCceeEEEcCCCCeEEEEecCCCCeEEEEeC
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG-G-VDQPSALAVDPESGYLFWSESGKIPLIARAGL 161 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~-~-~~~P~~iavd~~~g~lywtd~~~~~~I~~~~l 161 (652)
..+. ++++.+. ++++.+-+..+.|.+.++........... . ......+++.|...+|.-.. ....|..-++
T Consensus 227 ~~v~----~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~d~~i~vwd~ 299 (340)
T 1got_B 227 SDIN----AICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY--DDFNCNVWDA 299 (340)
T ss_dssp SCEE----EEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE--TTSEEEEEET
T ss_pred CCEE----EEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC--CCCeEEEEEc
Confidence 5567 8888874 45556666678899999875543332221 1 22467889998555554443 2456777776
Q ss_pred CCCCcEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 162 DGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 162 dg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
........+..--.....+++.+.+..|.-...||
T Consensus 300 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCc
Confidence 54433332322234567788877766666666663
No 258
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.53 E-value=0.46 Score=50.06 Aligned_cols=204 Identities=9% Similarity=0.031 Sum_probs=118.8
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee---ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE---RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~---~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
..+.+|+|++..+.+..+-...+.|...+++......++. ....+.+|++.+..++++.+-+..++|.+-++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~-- 197 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN-- 197 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC--
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC--
Confidence 4578999999877777666667888888877554444442 23468889998766666667777788988887652
Q ss_pred ccEEEEEeC--CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCC
Q psy5768 391 QRIVVVRLG--QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARL 468 (652)
Q Consensus 391 ~~~~~~~~~--~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~ 468 (652)
....+... ......+++++|...+|...... +.|...+++|.....+.. .-....+|++.+.++.++.+-...
T Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 198 -ILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMDGKELWNLRM-HKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp -EEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESSSCBCCCSBC-CSSCEEEEEECTTCSSEEEEEETT
T ss_pred -ceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccCcceeEEEec-ccceEEeeeecCCCceEEEEecCc
Confidence 22222211 12345679999976666554332 377777777754333221 123457888888877666655555
Q ss_pred CeEEEEecCCCc-eEEEecC--CCCceeEEEEe--CCEEEEEcCCCCeEEEEEccCCceEEE
Q psy5768 469 DKIERCDYDGTN-RIVLSKI--SPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYTGEEVYT 525 (652)
Q Consensus 469 ~~I~~~~ldG~~-~~~l~~~--~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~g~~~~~ 525 (652)
+.|...|+.... ...+... ......+|++. +.+|+ +-...+.|..-+..++.....
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~-s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL-TTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE-EEESSSCEEEEESSSSSSEEE
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECCCCCeeE-EEcCCCEEEEEECCCCccceE
Confidence 666666765322 1111111 11123445543 33444 333455565556555554433
No 259
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.51 E-value=0.0034 Score=56.32 Aligned_cols=42 Identities=31% Similarity=0.748 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCCcccc-eecCCCceEEEeCCc-cccCCCccccc
Q psy5768 236 GTNPCGVNNGGCAELC-LYNGVSAVCACAHGV-VAQDGKSCSEY 277 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~lC-~~~~~~~~C~C~~G~-l~~dg~~C~~~ 277 (652)
..++|...+++|.|.| +..+++|+|.|+.|| +..||++|...
T Consensus 84 ~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 84 LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC
T ss_pred CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC
Confidence 3489998888999999 877779999999998 56789999753
No 260
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.49 E-value=2.2 Score=42.13 Aligned_cols=149 Identities=10% Similarity=0.006 Sum_probs=95.4
Q ss_pred CCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEE
Q psy5768 37 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVAR 116 (652)
Q Consensus 37 ~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~ 116 (652)
...+.++++++.+++|+-.. ..+.|..++.........+... ...+. .+++...++ +..+-+..+.|.+.+
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~---~dg~i~iw~~~~~~~~~~~~~h-~~~v~----~~~~~~~~~-~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSS---ADKLIKIWGAYDGKFEKTISGH-KLGIS----DVAWSSDSN-LLVSASDDKTLKIWD 93 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTCCEEEEECCC-SSCEE----EEEECTTSS-EEEEEETTSEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEee---CCCeEEEEeCCCcccchhhccC-CCceE----EEEEcCCCC-EEEEECCCCEEEEEE
Confidence 35789999999888777655 5678888887654444444444 45566 788876444 444444678899999
Q ss_pred cCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 117 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 117 ~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
++.......+.........+++.|...+|+-... ...|..-++........+...-.....+++++.+..|+....+|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 8755444444444456778899996666665543 45677777654333322222234567788887777776666663
No 261
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.49 E-value=2.7 Score=43.26 Aligned_cols=326 Identities=10% Similarity=0.056 Sum_probs=164.7
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL 117 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~ 117 (652)
....+++|++...+|+... ..+.|+.+++........+. .+... .++.-...++++.+-...+.|.+.++
T Consensus 57 ~~~~~~~~s~~g~~l~~~~---~d~~v~i~d~~~~~~~~~~~---~~~~~----~~~~~~~~~~~l~~~~~dg~i~iwd~ 126 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKAR---LDGHDFLFNTIIRDGSKMLK---RADYT----AVDTAKLQMRRFILGTTEGDIKVLDS 126 (420)
T ss_dssp BCCTTCEEEEEETTEEEEE---ETTEEEEEECCSEETTTTSC---SCCEE----EEEEECSSSCEEEEEETTSCEEEECT
T ss_pred ccccceeeeecCCeEEEEE---cCCcEEEEEecccceeeEEe---cCCce----EEEEEecCCCEEEEEECCCCEEEEeC
Confidence 3455789999988888766 45788888776432111111 11122 33232234555555556778888888
Q ss_pred CCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCC-CCcEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 118 TGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-KKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 118 dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg-~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
........+..-......++..|...+|+-... ...|..-++.. +....+ ...-.....+++.+.++.|+....+|
T Consensus 127 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 127 NFNLQREIDQAHVSEITKLKFFPSGEALISSSQ--DMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp TSCEEEEETTSSSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CCcceeeecccccCccEEEEECCCCCEEEEEeC--CCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 766555554444567889999996555655442 45777777764 333333 32235678899998888888777774
Q ss_pred CcEEEEEecCCCCceEEEeecC--CCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcc
Q psy5768 197 GNIHIISLSNLSDVSTISMKPY--GDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSC 274 (652)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C 274 (652)
..+..-......... +... .......+.++...... .. .......++
T Consensus 204 -~v~iwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~-~~---------------------------~~~~~~v~~ 252 (420)
T 3vl1_A 204 -TIRLWECGTGTTIHT--FNRKENPHDGVNSIALFVGTDRQ-LH---------------------------EISTSKKNN 252 (420)
T ss_dssp -CEEEEETTTTEEEEE--ECBTTBTTCCEEEEEEEECCCSS-CG---------------------------GGCCCCCCT
T ss_pred -cEEEeECCCCceeEE--eecCCCCCCCccEEEEecCCcce-ee---------------------------ecccCcccc
Confidence 333221111111111 1100 00011111111100000 00 000001111
Q ss_pred c--cc-ceEEEEee-ecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc--
Q psy5768 275 S--EY-DAFIMYSR-VNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH-- 348 (652)
Q Consensus 275 ~--~~-~~~Ll~s~-~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~-- 348 (652)
. .+ ..+|+.+. ...|+..++..+. ....+.. .+...+.+++|++..+.++++-...+.|...++.....
T Consensus 253 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~-~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~ 327 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHVSGVITVHNVFSKE----QTIQLPS-KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV 327 (420)
T ss_dssp TCSSCTTEEEEEEETTSCEEEEETTTCC----EEEEECC-TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred eEEcCCCCEEEEEcCCCeEEEEECCCCc----eeEEccc-ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch
Confidence 1 12 23444443 3345555652221 1112211 22345788999988774555555668888888765332
Q ss_pred eEEee-ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc------EEEEEeCCCCCceEEEEeCCCC
Q psy5768 349 RVLLE-RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR------IVVVRLGQHDKPRGIDIDSCDS 414 (652)
Q Consensus 349 ~~i~~-~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~------~~~~~~~~~~~P~~Iavdp~~g 414 (652)
..+.. .-..+..++.. .+.++.+-+..++|.+-++....... .............+++..|...
T Consensus 328 ~~~~~~~~~~v~~~~~~--~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 328 GEFLINEGTPINNVYFA--AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp EEEEESTTSCEEEEEEE--TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred hhhhccCCCCceEEEeC--CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence 33332 23345555543 56677777777888877765422110 0111123345566677777544
No 262
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=95.43 E-value=0.018 Score=63.75 Aligned_cols=59 Identities=15% Similarity=0.346 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCcc-----ccccCCCCceeee-ccCceeecc-----------C-CcccCcccccCCCceeecc-CeecCC
Q psy5768 548 KTPCRHLNGNCDD-----ICKLDETGQVVCS-CFTGKVLME-----------D-NRSCTINTVCSEHDFKCSD-GMCIPF 608 (652)
Q Consensus 548 ~~~C~~~ng~Cs~-----lCl~~~~~~~~C~-Cp~g~~l~~-----------d-~~C~~~~~~C~~~~f~C~~-g~Ci~~ 608 (652)
.++|..+++.|.+ .|+..+. +|+|. |+.||.... + ++|.. ...|......|.+ +.|+..
T Consensus 44 iDEC~~~p~~C~~gg~~~~CvNt~g-sY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d-ideC~~~~~pC~~~~~Cvnt 121 (634)
T 1yo8_A 44 LDECALVPDICFSTSKVPRCVNTQP-GFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP-ENPCKDKTHNCHKHAECIYL 121 (634)
T ss_dssp CCTTTTSCCCSCCCSSSCCEEECSS-SEEECCCCTTEEECCCEESSSHHHHSCCCCEEE-CCTTTTTCCCCCTTEEEEEC
T ss_pred cccccCCCCcccCCccccceeeccC-ceecccCCCCcccCccccccccccccCCCcccc-cccccCCCcccccCcccccc
Confidence 4778766667865 7998776 69998 999998653 3 45764 4556655556664 366643
No 263
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.40 E-value=0.0058 Score=55.54 Aligned_cols=41 Identities=22% Similarity=0.429 Sum_probs=33.5
Q ss_pred CCCCCCCC-CCCCcccceecCCCceEEEeCCc-cccCCCcccc
Q psy5768 236 GTNPCGVN-NGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSE 276 (652)
Q Consensus 236 ~~n~C~~~-ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~ 276 (652)
+.++|... ++.|+|.|...+.+|+|.|+.|| |..|+++|..
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 35789864 46899999988878999999999 6679999963
No 264
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.39 E-value=0.0086 Score=53.34 Aligned_cols=38 Identities=26% Similarity=0.634 Sum_probs=31.9
Q ss_pred CCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 551 C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
|...|++|+|.|+..++++|+|.|+.||.|..| ++|..
T Consensus 91 c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 91 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp TTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred ccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 455578999999987764699999999999888 88875
No 265
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.36 E-value=0.0039 Score=58.58 Aligned_cols=40 Identities=38% Similarity=0.901 Sum_probs=35.2
Q ss_pred CCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCccccc
Q psy5768 238 NPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEY 277 (652)
Q Consensus 238 n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~ 277 (652)
++|...+++|.+.|+..+++|+|.|+.|| |..||++|...
T Consensus 82 deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred ccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccC
Confidence 78998888999999988889999999998 66799999843
No 266
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.33 E-value=0.0077 Score=55.44 Aligned_cols=39 Identities=28% Similarity=0.598 Sum_probs=32.4
Q ss_pred CCCCCCCCC---CccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHLNGN---CDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~ng~---Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
+.|...+++ |+|.|...++ +++|.|+.||+|..| ++|.+
T Consensus 125 ~eC~~~~~~~~~C~~~C~n~~g-~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 125 DECQVAPGEAPTCDHHCHNHLG-GFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CTTCCCTTSCCSSSSEEEEETT-EEEEECCTTEEECTTSSCEEE
T ss_pred CcccCCCCCCCccCCccccCCC-CEEEeCCCCcEECCCCCcccc
Confidence 567766655 9999998776 599999999999988 88864
No 267
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.27 E-value=2.7 Score=42.00 Aligned_cols=114 Identities=13% Similarity=0.166 Sum_probs=72.2
Q ss_pred ceEEEEEEEcCC---CeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCC
Q psy5768 314 KNIIELSYDYKR---KTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPK 389 (652)
Q Consensus 314 ~~~~~v~~D~~~---~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~ 389 (652)
..+.+++|.+.. +.++++-...+.|...++........+ .....+..|++.+..++++.+-...+.|.+.++...
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~- 148 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD- 148 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT-
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC-
Confidence 456788887763 345555556688888887644333223 345578889998844455556666788998888642
Q ss_pred CccEEEEEe----CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 390 AQRIVVVRL----GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 390 ~~~~~~~~~----~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
+.+... .....+.+|+++|...+|+.+... +.|...++.
T Consensus 149 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~ 191 (366)
T 3k26_A 149 ---TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD---HSLKLWRIN 191 (366)
T ss_dssp ---EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT---SCEEEEESC
T ss_pred ---eEEEEecccccccCceeEEEECCCCCEEEEecCC---CCEEEEECC
Confidence 333332 345678999999977676665543 255555544
No 268
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.27 E-value=0.0044 Score=54.67 Aligned_cols=39 Identities=38% Similarity=0.940 Sum_probs=34.2
Q ss_pred CCCCCCCCCCcccceecCCCceEEEeCCc-cccCCCcccc
Q psy5768 238 NPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSE 276 (652)
Q Consensus 238 n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~ 276 (652)
++|..++++|.+.|+..+++|+|.|+.|| +..||++|..
T Consensus 82 d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence 78988788999999988889999999998 5678999974
No 269
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.26 E-value=0.0063 Score=54.25 Aligned_cols=37 Identities=35% Similarity=0.821 Sum_probs=31.6
Q ss_pred CCCCCCCCcccceecCC-CceEEEeCCc-cccCCCcccc
Q psy5768 240 CGVNNGGCAELCLYNGV-SAVCACAHGV-VAQDGKSCSE 276 (652)
Q Consensus 240 C~~~ng~Cs~lC~~~~~-~~~C~C~~G~-l~~dg~~C~~ 276 (652)
|...|++|+|.|+...+ +|+|.|+.|| +..||++|..
T Consensus 91 c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 91 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp TTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred ccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 45568899999998887 8999999998 5678999974
No 270
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.20 E-value=0.0064 Score=49.02 Aligned_cols=58 Identities=19% Similarity=0.363 Sum_probs=37.2
Q ss_pred CCCCCCCCCCcc-ccccCCCCceeeeccCceeecc-C-CcccCcccccCCCceeeccCeecCC
Q psy5768 549 TPCRHLNGNCDD-ICKLDETGQVVCSCFTGKVLME-D-NRSCTINTVCSEHDFKCSDGMCIPF 608 (652)
Q Consensus 549 ~~C~~~ng~Cs~-lCl~~~~~~~~C~Cp~g~~l~~-d-~~C~~~~~~C~~~~f~C~~g~Ci~~ 608 (652)
++|..+.+.|.+ .|+..++ +|+|.|+.||.+.. + +.|.. ...|......|.++.|+..
T Consensus 4 deC~~~~~~C~~g~C~n~~g-~y~C~C~~Gy~~~~~~g~~C~d-ideC~~~~~~C~~~~C~n~ 64 (86)
T 1lmj_A 4 DECRISPDLCGRGQCVNTPG-DFECKCDEGYESGFMMMKNCMD-IDECQRDPLLCRGGVCHNT 64 (86)
T ss_dssp CTTTTCSSTTTTSCEEEETT-EEEECCCSSEEECTTTSSSEEE-CCHHHHCSSTTTTSEEEEE
T ss_pred ccccCCCCCCCCCEEECCCC-CEEeeCCCCcCccCCCCCccCC-cccccCCCCcCCCCEeEcC
Confidence 556554445654 7887776 69999999999753 3 67764 3445443344555667643
No 271
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.19 E-value=0.0034 Score=50.71 Aligned_cols=41 Identities=20% Similarity=0.442 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCCc-ccceecCCCceEEEeCCc-cccCCCccc
Q psy5768 235 TGTNPCGVNNGGCA-ELCLYNGVSAVCACAHGV-VAQDGKSCS 275 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs-~lC~~~~~~~~C~C~~G~-l~~dg~~C~ 275 (652)
.++++|...+..|. +.|+..+++|+|.|+.|| +..++++|.
T Consensus 44 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 44 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp EECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred CCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 35788887666786 589988889999999998 557888884
No 272
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.13 E-value=2.8 Score=47.18 Aligned_cols=196 Identities=14% Similarity=0.177 Sum_probs=109.5
Q ss_pred EEEEcCCCeEEEeecc------------cccEEEEeccCCcc--eEEeeccC----ceeeeEEEccCCEEEEEeCC---C
Q psy5768 319 LSYDYKRKTLFYSDIQ------------KGTINSVFFNGSNH--RVLLERQG----SVEGLAYEYVHNYLYWTCNN---D 377 (652)
Q Consensus 319 v~~D~~~~~lywsd~~------------~~~I~~~~~~g~~~--~~i~~~~~----~~~glAvDw~~~~LYwtd~~---~ 377 (652)
+++. ..+.||++... ...|++.++..... +.+.+... ...++++.+.++.|+++... .
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 4455 45667776543 24588877764332 34443322 24578888999999876542 2
Q ss_pred CeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEe-cCCCCCceEEEeecCCCc---eEEEEcCCCCCceEE
Q psy5768 378 ATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTN-WNSHLPSIQRAFFSGFGT---ESIITTDITMPNALA 453 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd-~~~~~~~I~r~~ldG~~~---~~l~~~~l~~P~gla 453 (652)
..|+.+++++..+..+.+. .....-... +++..+.||+.. .+....+|.++.+++... +.++...-.. +.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~--~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~~ 332 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQ--GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV---LT 332 (693)
T ss_dssp CEEEEEETTSTTCCCEEEE--CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC---EE
T ss_pred cEEEEEECCCCCCceEEEe--CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE---EE
Confidence 5889998876432233332 122222222 566667777654 333346899999988665 5555433222 25
Q ss_pred EecCCCEEEEEeC--CCCeEEEEecCCCceEEEecCCCCceeEEEE--eCCEEEEE--c-CCCCeEEEEEccCCc
Q psy5768 454 LDHQAEKLFWGDA--RLDKIERCDYDGTNRIVLSKISPLHPFDMAV--YGEFIFWT--D-WVIHAVLRANKYTGE 521 (652)
Q Consensus 454 iD~~~~~LYw~D~--~~~~I~~~~ldG~~~~~l~~~~~~~p~glav--~~~~lYwt--d-~~~~~I~~~~k~~g~ 521 (652)
++..+++|++... ...+|..++++|...+.+.........+++. .++.|+++ + ..-..|+..+..+|+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 5555888888744 3447999999987666553222112222222 23444443 2 122567777765554
No 273
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.12 E-value=3.3 Score=42.03 Aligned_cols=174 Identities=9% Similarity=0.017 Sum_probs=103.4
Q ss_pred EecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCC-CEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 5 VSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVK-GKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 5 v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~-~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
++....+.|.++|++ ++...++... -..+..+++.+.. +.++++- ...+.|+.+++........+...
T Consensus 170 ~t~s~D~~v~lwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~g~~l~sg--s~Dg~v~~wd~~~~~~~~~~~~h- 239 (354)
T 2pbi_B 170 LTASGDGTCALWDVESGQLLQSFHGH-------GADVLCLDLAPSETGNTFVSG--GCDKKAMVWDMRSGQCVQAFETH- 239 (354)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECCCSSCCEEEEE--ETTSCEEEEETTTCCEEEEECCC-
T ss_pred EEEeCCCcEEEEeCCCCeEEEEEcCC-------CCCeEEEEEEeCCCCCEEEEE--eCCCeEEEEECCCCcEEEEecCC-
Confidence 334456788888876 4455555432 2467888888753 3444444 46788999998654333333433
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCC--CCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG--VDQPSALAVDPESGYLFWSESGKIPLIARAG 160 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~--~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ 160 (652)
-..+. ++++.+. ++++.+-+..+.|.+.++.......+.... ......+++.|...+|+-.. ....|..-+
T Consensus 240 ~~~v~----~v~~~p~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~--~d~~i~vwd 312 (354)
T 2pbi_B 240 ESDVN----SVRYYPS-GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY--NDYTINVWD 312 (354)
T ss_dssp SSCEE----EEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE--TTSCEEEEE
T ss_pred CCCeE----EEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE--CCCcEEEEE
Confidence 44566 8888764 445555556788888888765443333321 22456888888555555443 244666666
Q ss_pred CCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 161 LDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 161 ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
+........+..--.....+++.+.+..|.-.+.|
T Consensus 313 ~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 313 VLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp TTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 53322222222223567888888877777666666
No 274
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.11 E-value=2.9 Score=41.30 Aligned_cols=147 Identities=10% Similarity=-0.032 Sum_probs=87.4
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEc
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARL 117 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~ 117 (652)
..+.+|+|+|.+..|.-.. ..+.|..+++........+... -..+. .+++....+ +..+-+..+.|.+.++
T Consensus 14 ~~V~~~~fsp~~~~l~s~~---~dg~v~lWd~~~~~~~~~~~~~-~~~v~----~~~~~~~~~-~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTL---YSGRVELWNYETQVEVRSIQVT-ETPVR----AGKFIARKN-WIIVGSDDFRIRVFNY 84 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE---TTSEEEEEETTTTEEEEEEECC-SSCEE----EEEEEGGGT-EEEEEETTSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEc---CCCcEEEEECCCCceeEEeecc-CCcEE----EEEEeCCCC-EEEEECCCCEEEEEEC
Confidence 4789999999988887665 5688888888754322223333 33455 777776444 4455556788999998
Q ss_pred CCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCc-EEEEeecccCceeEEEeccC-CEEEEEeCC
Q psy5768 118 TGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ-TILAQEIIMPIKDITLDLKF-FSAFYRNLS 195 (652)
Q Consensus 118 dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~-~~~~~~~~~~p~gl~lD~~~-~~ly~~d~~ 195 (652)
........+..-......+++.|...+|+-... ...|..-++..... .......-.....+++++.+ ..|.-...|
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~--D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD--DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECC--CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 754444444444456789999996655554432 44566656543322 22222223345677777643 334334444
No 275
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.09 E-value=5.6 Score=44.57 Aligned_cols=141 Identities=9% Similarity=-0.050 Sum_probs=89.7
Q ss_pred eeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCc--CCccCCCCcEEEEccCCcEEEEeC--------CC
Q psy5768 40 ISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKY--PAVTACNLHIAVDWIAQNIYWSDP--------KE 109 (652)
Q Consensus 40 ~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~--~~p~~~~~~lavDw~~~~lY~~d~--------~~ 109 (652)
..++++.+.+ ++..+. ..+.|+.++.++...+.++..... ..+. .+++.+.++.|+++.. ..
T Consensus 18 ~~~~~~s~dg-~~~~~~---~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 18 TFFPNWISGQ-EYLHQS---ADNNIVLYNIETGQSYTILSNRTMKSVNAS----NYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCCEESSSS-EEEEEC---TTSCEEEEESSSCCEEEEECHHHHHTTTCS----EEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred CCccEECCCC-eEEEEc---CCCCEEEEEcCCCcEEEEEcccccccccee----eEEECCCCCeEEEEecCceeEEeecc
Confidence 3467788765 555455 467899999988765665543201 1255 8888877787877643 13
Q ss_pred CEEEEEEcCCCcE---EEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeec-------------
Q psy5768 110 NVIEVARLTGQYR---YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI------------- 173 (652)
Q Consensus 110 ~~I~v~~~dg~~~---~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~------------- 173 (652)
+.|.+.++++... +.+ ......++..|...+|.++. ...|...++++.....+....
T Consensus 90 ~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v 162 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVY---QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWV 162 (719)
T ss_dssp EEEEEEETTTTEECCSSCC----CSSBCCEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHH
T ss_pred eEEEEEECCCCccccceec----CcccccceECCCCCEEEEEE---CCeEEEEeCCCCCcEEEecCCCcCCeEcccccce
Confidence 6788889887644 222 13467789999777777774 347888887665544433221
Q ss_pred -----ccCceeEEEeccCCEEEEEeCC
Q psy5768 174 -----IMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 174 -----~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
+....+++..+.+++|++...+
T Consensus 163 ~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 163 YEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp HHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred eeeecccCcccEEECCCCCEEEEEEEC
Confidence 0122478888888888776554
No 276
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.05 E-value=0.0076 Score=48.70 Aligned_cols=42 Identities=21% Similarity=0.540 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCC-cccceecCCCceEEEeCCc-cccCCCccccc
Q psy5768 236 GTNPCGVNNGGC-AELCLYNGVSAVCACAHGV-VAQDGKSCSEY 277 (652)
Q Consensus 236 ~~n~C~~~ng~C-s~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~ 277 (652)
++++|..+++.| .+.|+..+.+|+|.|+.|| +..+++.|...
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di 45 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDI 45 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECC
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCc
Confidence 468998876668 5689988889999999998 45678888643
No 277
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.04 E-value=3.1 Score=41.40 Aligned_cols=174 Identities=14% Similarity=0.065 Sum_probs=106.5
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCC-----EEEEEeccCCcceEEEEEcCCCccEEEE
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKG-----KMFWSNVTKQVVTIEMAFMDGTKRETVV 78 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-----~lyw~d~~~~~~~I~~~~~dgs~~~~v~ 78 (652)
+++....+.|.++++.+....++... ...+..+.+.|... .++.+- ...+.|..+++........+
T Consensus 122 l~s~s~D~~i~vwd~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~~~~l~s~--~~d~~i~~wd~~~~~~~~~~ 192 (319)
T 3frx_A 122 IISGSRDKTIKVWTIKGQCLATLLGH-------NDWVSQVRVVPNEKADDDSVTIISA--GNDKMVKAWNLNQFQIEADF 192 (319)
T ss_dssp EEEEETTSCEEEEETTSCEEEEECCC-------SSCEEEEEECCC------CCEEEEE--ETTSCEEEEETTTTEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEecc-------CCcEEEEEEccCCCCCCCccEEEEE--eCCCEEEEEECCcchhheee
Confidence 44445667899999998877766542 24677888877532 244444 46778888888765433333
Q ss_pred eCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5768 79 SQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIAR 158 (652)
Q Consensus 79 ~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~ 158 (652)
... ...+. .+++.+. +++..+-+..+.|.+-++........+.. ......+++.|...+|..+. ...|..
T Consensus 193 ~~h-~~~v~----~~~~sp~-g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~---~~~i~v 262 (319)
T 3frx_A 193 IGH-NSNIN----TLTASPD-GTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAAT---ATGIKV 262 (319)
T ss_dssp CCC-CSCEE----EEEECTT-SSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEE---TTEEEE
T ss_pred cCC-CCcEE----EEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEc---CCCcEE
Confidence 444 45566 8888764 44555555678899999876654444443 35678999999655554443 235666
Q ss_pred EeCCCCCcEEEEeec--------ccCceeEEEeccCCEEEEEeCCC
Q psy5768 159 AGLDGKKQTILAQEI--------IMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 159 ~~ldg~~~~~~~~~~--------~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
..++.......+... -.....+++.+.++.|+-...||
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg 308 (319)
T 3frx_A 263 FSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN 308 (319)
T ss_dssp EEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCc
Confidence 666543322222111 12346788888877777666663
No 278
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.03 E-value=3.2 Score=41.42 Aligned_cols=145 Identities=7% Similarity=-0.060 Sum_probs=90.6
Q ss_pred ecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCC----CEEEEEeccCCcceEEEEEcCCCccEEEEeC
Q psy5768 6 SSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVK----GKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ 80 (652)
Q Consensus 6 ~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~----~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~ 80 (652)
+....+.|.+++.. ++....+..... ...-..+.++++.+.. ..|+... ..+.|..+++........+..
T Consensus 39 ~~~~~~~v~vw~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 39 ATVGSNRVTLYECHSQGEIRLLQSYVD--ADADENFYTCAWTYDSNTSHPLLAVAG---SRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp EEEETTEEEEEEECGGGCEEEEEEEEC--SCTTCCEEEEEEEECTTTCCEEEEEEE---TTCEEEEECTTTCCEEEEEES
T ss_pred EECCCCEEEEEEcCCCcEEEeeeeccc--cCCCCcEEEEEeccCCCCCCCEEEEec---CCCEEEEEEchhceEeeeecC
Confidence 33345589999888 555555543211 1133578999999873 3455444 668899898775433333444
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEE---eCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLI---SGGVDQPSALAVDPESGYLFWSESGKIPLIA 157 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~---~~~~~~P~~iavd~~~g~lywtd~~~~~~I~ 157 (652)
. ...+. .+++....+++..+-...+.|.+.++........+ .........++++|...+|+.... ...|.
T Consensus 114 ~-~~~i~----~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~ 186 (366)
T 3k26_A 114 H-GNAIN----ELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM--DHSLK 186 (366)
T ss_dssp C-CSCEE----EEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET--TSCEE
T ss_pred C-CCcEE----EEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecC--CCCEE
Confidence 4 45567 78877645666666666788999998765444444 233457889999996656655543 34566
Q ss_pred EEeCC
Q psy5768 158 RAGLD 162 (652)
Q Consensus 158 ~~~ld 162 (652)
..++.
T Consensus 187 i~d~~ 191 (366)
T 3k26_A 187 LWRIN 191 (366)
T ss_dssp EEESC
T ss_pred EEECC
Confidence 66654
No 279
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=95.02 E-value=0.0068 Score=42.15 Aligned_cols=20 Identities=40% Similarity=1.046 Sum_probs=18.0
Q ss_pred CCCCCCeeecCCCCcccCCC
Q psy5768 632 RDCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~~~~Ci~~~~ 651 (652)
+.|++++|+|.||+||+.+|
T Consensus 4 ~~C~~~~F~C~~g~CI~~~~ 23 (45)
T 1d2l_A 4 PQCQPGEFACANSRCIQERW 23 (45)
T ss_dssp CBTTBTCEEETTTEEECGGG
T ss_pred CcCCCCceEcCCCCeEehhh
Confidence 57899999999999999876
No 280
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=95.01 E-value=0.0016 Score=61.40 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=30.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCeeec--CCCCcccCCC
Q psy5768 613 DRVYNCHDKSDEGILYCAMRDCRPGYFKC--DNNKCILSSH 651 (652)
Q Consensus 613 d~~~dC~d~sde~~~~C~~~~C~~~~f~C--~~~~Ci~~~~ 651 (652)
-...+|.|+|||.. | ..|++++|+| .||+|||.+|
T Consensus 38 ~~~~~c~d~sDE~~--C--~~C~~~~F~C~~~~g~CIp~~~ 74 (215)
T 2gtl_O 38 RKAGSLRHRVEELE--D--PSCDEHEHQCGGDDPQCISKLF 74 (215)
T ss_dssp HHHHHHHHHHHHHS--C--CSSCTTEEECCSSSCCEEEGGG
T ss_pred cccccCCcchhhcc--C--CCCCCcceeeCCCCCcCccccc
Confidence 34458999999987 8 5799999999 7999999887
No 281
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.95 E-value=4.1 Score=42.29 Aligned_cols=175 Identities=7% Similarity=0.005 Sum_probs=104.4
Q ss_pred EEecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 4 AVSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
+++....+.|.++|+. |....++... -..+..+++++.+..|.-.. ..+.|..+++........+...
T Consensus 207 l~s~s~D~~i~~wd~~~~~~~~~~~~h-------~~~v~~~~~~~~g~~l~s~s---~D~~v~vwd~~~~~~~~~~~~h- 275 (410)
T 1vyh_C 207 IVSASRDKTIKMWEVQTGYCVKTFTGH-------REWVRMVRPNQDGTLIASCS---NDQTVRVWVVATKECKAELREH- 275 (410)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTCCEEEEECCC-
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeCC-------CccEEEEEECCCCCEEEEEc---CCCeEEEEECCCCceeeEecCC-
Confidence 3444456778888876 4444455432 24678899988766655444 5678888887654433333333
Q ss_pred cCCccCCCCcEEEEccC-------------------CcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCC
Q psy5768 83 YPAVTACNLHIAVDWIA-------------------QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG 143 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~-------------------~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g 143 (652)
-..+. .+++.... +.+.++-+..+.|.+.++........+.+-....++++++|...
T Consensus 276 ~~~v~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~ 351 (410)
T 1vyh_C 276 RHVVE----CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351 (410)
T ss_dssp SSCEE----EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CceEE----EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCC
Confidence 34455 55554421 45666666778899998875544433444345678999999655
Q ss_pred eEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 144 YLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 144 ~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
+|+-.. ....|..-++........+..--....++++.+....|.-...|
T Consensus 352 ~l~s~s--~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 352 FILSCA--DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp CEEEEE--TTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEEe--CCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 665443 34567777765433322222223456788887776666555555
No 282
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=94.93 E-value=0.015 Score=52.12 Aligned_cols=39 Identities=33% Similarity=0.719 Sum_probs=20.4
Q ss_pred CCCCCCCCCCcccc-ccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHLNGNCDDIC-KLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~ng~Cs~lC-l~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++|...++.|.+.| +..++ +|+|.|+.||.+..| ++|..
T Consensus 86 deC~~~~~~C~~~C~~n~~g-~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 86 ATCNIKNGRCKQFCKTGADS-KVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp CCTTSGGGSCSSBCCCCSSS-CCCCBCCTTEEECTTSSSEEE
T ss_pred ccccCCCCCCcCCCCCCCCC-CEEeEcCCCcEeCCCCCcCCC
Confidence 44554445555566 43332 466666666665555 55543
No 283
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=94.87 E-value=0.0094 Score=39.54 Aligned_cols=19 Identities=37% Similarity=0.663 Sum_probs=17.0
Q ss_pred CCCCCeeecCCCCcccCCC
Q psy5768 633 DCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 633 ~C~~~~f~C~~~~Ci~~~~ 651 (652)
+|++++|+|.||+||+.+|
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~ 19 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSW 19 (37)
T ss_dssp CCCTTCEECTTSCEECGGG
T ss_pred CCCCCceEcCCCCeechhh
Confidence 4889999999999999875
No 284
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=94.87 E-value=0.011 Score=40.92 Aligned_cols=20 Identities=30% Similarity=0.838 Sum_probs=18.0
Q ss_pred CCCCCCeeecCCCCcccCCC
Q psy5768 632 RDCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~~~~Ci~~~~ 651 (652)
..|++++|+|.||+|||.+|
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~ 22 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHW 22 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGG
T ss_pred CCCCCCceEeCCCCeEecCc
Confidence 57899999999999999876
No 285
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.81 E-value=3.8 Score=41.26 Aligned_cols=176 Identities=9% Similarity=-0.023 Sum_probs=98.0
Q ss_pred EecCCCCeEEEEecCCCeeE-EEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEE--EEeCC
Q psy5768 5 VSSPTQSKIVVCNLEGEYQT-TILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRET--VVSQK 81 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~--v~~~~ 81 (652)
++....+.|+++++++.... ......+ .-..+.+|+++|.+++|.-.. ..+.|..++.+....+. .+...
T Consensus 32 as~~~D~~i~iw~~~~~~~~~~~~~~~~----h~~~v~~~~~sp~g~~l~s~s---~D~~v~iw~~~~~~~~~~~~~~~h 104 (345)
T 3fm0_A 32 ASCGGDRRIRIWGTEGDSWICKSVLSEG----HQRTVRKVAWSPCGNYLASAS---FDATTCIWKKNQDDFECVTTLEGH 104 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECSS----CSSCEEEEEECTTSSEEEEEE---TTSCEEEEEECCC-EEEEEEECCC
T ss_pred EEEcCCCeEEEEEcCCCcceeeeeeccc----cCCcEEEEEECCCCCEEEEEE---CCCcEEEEEccCCCeEEEEEccCC
Confidence 33345577888887765432 2211111 335789999999888777655 45677777766543222 23333
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc---EEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY---RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIAR 158 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~---~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~ 158 (652)
...+. .+++.+. +++..+-+..+.|.+.+++... ....+.........++..|...+|.-... ...|..
T Consensus 105 -~~~v~----~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~~ 176 (345)
T 3fm0_A 105 -ENEVK----SVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKL 176 (345)
T ss_dssp -SSCEE----EEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET--TSCEEE
T ss_pred -CCCce----EEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC--CCcEEE
Confidence 44566 7888764 4455555567788888876432 12223333345678899986555555443 234444
Q ss_pred EeCCCCCcEEE--EeecccCceeEEEeccCCEEEEEeCC
Q psy5768 159 AGLDGKKQTIL--AQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 159 ~~ldg~~~~~~--~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
.++........ +..--.....|++++.+++|.-...|
T Consensus 177 w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 177 YREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 44332221111 11113456778888777666655555
No 286
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=94.72 E-value=0.018 Score=46.40 Aligned_cols=54 Identities=22% Similarity=0.460 Sum_probs=34.9
Q ss_pred CCCCCCCCCC-ccccccCCCCceeeeccCceeeccC-CcccCcccccCCCceeeccCeecC
Q psy5768 549 TPCRHLNGNC-DDICKLDETGQVVCSCFTGKVLMED-NRSCTINTVCSEHDFKCSDGMCIP 607 (652)
Q Consensus 549 ~~C~~~ng~C-s~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~~~~~C~~~~f~C~~g~Ci~ 607 (652)
++|..+.+.| .+.|+..++ +|+|.|+.||.+..+ ++|.. ...|.+ -.|. +.|+.
T Consensus 4 deC~~~~~~C~~~~C~n~~g-~y~C~C~~G~~~~~~g~~C~d-ideC~~--~~C~-~~C~n 59 (87)
T 1z6c_A 4 DECSLKPSICGTAVCKNIPG-DFECECPEGYRYNLKSKSCED-IDECSE--NMCA-QLCVN 59 (87)
T ss_dssp CSSSSSSSSBTTSSCCCBTT-BCCCSSSTTCEEETTTTEEEC-CCHHHH--SCCS-SEECC
T ss_pred ccccCCCCCCCCCEeECCCC-CEEEECCCCceECCCCCcCCC-cCeeCC--CCCC-CEEEc
Confidence 4565544446 457887776 699999999999877 88864 334532 2343 45554
No 287
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.68 E-value=7.8 Score=44.21 Aligned_cols=398 Identities=10% Similarity=0.040 Sum_probs=193.2
Q ss_pred eeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCC
Q psy5768 40 ISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTG 119 (652)
Q Consensus 40 ~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg 119 (652)
+..|..|. ++.||+.. ..+.|++++......+.+........+. .|..|. .++|++.- ..+-+.+.+.+.
T Consensus 175 i~~i~~d~-~g~lwigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~i~----~i~~d~-~g~lwigt-~~~Gl~~~~~~~ 244 (795)
T 4a2l_A 175 IASTLYRQ-GDQIYIGT---STDGLYTYSITQKTFEKVIPILGTKQIQ----AILQQS-PTRIWVAT-EGAGLFLINPKT 244 (795)
T ss_dssp CEEEEEEE-TTEEEEEE---SSSCEEEEETTTCCEEECC----CCCEE----EEEEEE-TTEEEEEE-BSSCEEEEETTT
T ss_pred eEEEEECC-CCCEEEEE---CCCCEEEEeCCCCeEEEecCCCCCCeeE----EEEEcC-CCCEEEEE-CCCCeEEEeCCC
Confidence 67888884 57888765 3346888887654333321111022355 778885 45555443 233477777765
Q ss_pred CcEEEEEeC-----C--CCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeec-------ccCceeEEEecc
Q psy5768 120 QYRYVLISG-----G--VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI-------IMPIKDITLDLK 185 (652)
Q Consensus 120 ~~~~~l~~~-----~--~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~-------~~~p~gl~lD~~ 185 (652)
.....+... . ....+.|+.|+ +|.|+.... . .|.+.+........+.... -.....|..|..
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~--~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 320 (795)
T 4a2l_A 245 KEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWIGTF--N-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ 320 (795)
T ss_dssp TEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEEEES--S-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT
T ss_pred CeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEEEeC--C-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC
Confidence 433333221 1 13467888997 677766543 2 5666665443322222110 124566777753
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCC
Q psy5768 186 FFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHG 265 (652)
Q Consensus 186 ~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G 265 (652)
+.|++....+|-. .+ ..... .++.|.... . .++ +....-.+.+..
T Consensus 321 -g~lWigt~~~Gl~-~~--~~~~~---------------~~~~~~~~~----~----~~~-------l~~~~V~~i~~d- 365 (795)
T 4a2l_A 321 -GGMWLGTYFGGLN-YY--HPIRN---------------RFKNIRNIP----Y----KNS-------LSDNVVSCIVED- 365 (795)
T ss_dssp -SCEEEEESSSCEE-EE--CGGGG---------------SSEEECCCT----T----SSS-------CSCSSEEEEEEC-
T ss_pred -cCEEEEECCCCeE-Ee--CCCcc---------------cceEEcCCC----C----CCC-------CCCCeeEEEEEC-
Confidence 4554444433321 11 00000 011111000 0 000 000011222221
Q ss_pred ccccCCCcccccceEEEEeee-cceeEEecCCCCCCCCCceeeeec-------cccceEEEEEEEcCCCeEEEeeccccc
Q psy5768 266 VVAQDGKSCSEYDAFIMYSRV-NRIDSIHMTDKSDLNSPFESIRNS-------TMMKNIIELSYDYKRKTLFYSDIQKGT 337 (652)
Q Consensus 266 ~l~~dg~~C~~~~~~Ll~s~~-~~i~~i~l~~~~~~~~p~~~~~~~-------~~~~~~~~v~~D~~~~~lywsd~~~~~ 337 (652)
.+.-|.+++. ..|.+++. .... +..+... -....+.++..|.. +.+.|.-...+.
T Consensus 366 -----------~~g~lWiGt~~~Gl~~~~~-~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~~lWigt~~~G 428 (795)
T 4a2l_A 366 -----------KDKNLWIGTNDGGLNLYNP-ITQR----FTSYTLQEDESARGIGSNNIKAVYVDEK-KSLVYIGTHAGG 428 (795)
T ss_dssp -----------TTSCEEEEESSSCEEEECT-TTCC----EEEECCC------CCSCSCEEEEEEETT-TTEEEEEETTTE
T ss_pred -----------CCCCEEEEECCCCeEEEcC-CCCc----EEEEecCCCCcccCCCCccEEEEEEcCC-CCEEEEEeCcCc
Confidence 1222444443 35655553 1111 1111100 01134677888864 453444333455
Q ss_pred EEEEeccCCcceEEee-----ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeC------CCCCceE
Q psy5768 338 INSVFFNGSNHRVLLE-----RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLG------QHDKPRG 406 (652)
Q Consensus 338 I~~~~~~g~~~~~i~~-----~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~------~~~~P~~ 406 (652)
|++++..+...+.+.. ....+..|+.|.. ++|+++.. +.+.+.+.... .-..+... .....++
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt~--~Gl~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~ 502 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGTL--SALVRFNPEQR---SFTTIEKEKDGTPVVSKQITT 502 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEES--SCEEEEETTTT---EEEECCBCTTCCBCCCCCEEE
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEec--CceeEEeCCCC---eEEEccccccccccCCceEEE
Confidence 8888766543333321 1235788888864 45655543 45777775431 11111111 1245688
Q ss_pred EEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE--c--CC--CCCceEEEecCCCEEEEEeCCCCeEEEEecCCCc
Q psy5768 407 IDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT--T--DI--TMPNALALDHQAEKLFWGDARLDKIERCDYDGTN 480 (652)
Q Consensus 407 Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~--~--~l--~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~ 480 (652)
|+.|+ .|.|++...+ .|.+.+.++... .+.. . .+ ....+|..|. .++|+.+-.. -|.+++.....
T Consensus 503 i~~d~-~g~lWigt~~----Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT~~--Gl~~~d~~~~~ 573 (795)
T 4a2l_A 503 LFRDS-HKRLWIGGEE----GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS-NGIIWVGTRE--GFYCFNEKDKQ 573 (795)
T ss_dssp EEECT-TCCEEEEESS----CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT-TSCEEEEESS--CEEEEETTTTE
T ss_pred EEECC-CCCEEEEeCC----ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC-CCCEEEEeCC--CceeECCCCCc
Confidence 99997 6778876642 577777655332 2110 0 11 2345777774 4566665543 57888876554
Q ss_pred eEEEecC-CC--CceeEEEEe-CCEEEEEcCCCCeEEEEEccCC
Q psy5768 481 RIVLSKI-SP--LHPFDMAVY-GEFIFWTDWVIHAVLRANKYTG 520 (652)
Q Consensus 481 ~~~l~~~-~~--~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g 520 (652)
.+.+... ++ ....+|+.+ ++.|+.+. .+.|.+.++.++
T Consensus 574 ~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~ 615 (795)
T 4a2l_A 574 IKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETE 615 (795)
T ss_dssp EEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTT
T ss_pred EEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCC
Confidence 4333221 22 346778777 45776665 456777776544
No 288
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=94.48 E-value=0.012 Score=40.64 Aligned_cols=20 Identities=35% Similarity=0.929 Sum_probs=16.7
Q ss_pred CCCCCCeeecCCCCcccCCC
Q psy5768 632 RDCRPGYFKCDNNKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~~~~Ci~~~~ 651 (652)
..|++++|+|.||+||+.+|
T Consensus 6 ~~C~~~~f~C~~g~CI~~~~ 25 (44)
T 3a7q_B 6 KECEKDQFQCRNERCIPSVW 25 (44)
T ss_dssp --CCTTEEECTTSCEEEGGG
T ss_pred CCCCCCceEcCCCCEeChhh
Confidence 47899999999999999876
No 289
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.41 E-value=5.5 Score=41.29 Aligned_cols=204 Identities=10% Similarity=0.020 Sum_probs=114.9
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.+++|++... ++.+-...+.|...++........+ .....+..|++++.++.| .+-+..++|.+-++.+.
T Consensus 109 ~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l-~sgs~D~~i~iwd~~~~---- 182 (410)
T 1vyh_C 109 SPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQGF---- 182 (410)
T ss_dssp SCEEEEEECSSSS-EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEE-EEEETTSCCCEEETTSS----
T ss_pred CcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCC----
Confidence 4567788887655 4444445677888887654433333 344568889998866654 45566677887787543
Q ss_pred EEEEEe-CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 393 IVVVRL-GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 393 ~~~~~~-~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
+.+..+ .......+++++|...+|+-.... ..|...++........+...-.+...+++.+.+..|.-+ ...+.|
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~-s~D~~v 258 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC-SNDQTV 258 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSCE
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEE-cCCCeE
Confidence 222222 233567889999976666554433 256555554333222222223455677777666555544 344667
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEeC---------------------CEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVYG---------------------EFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~~---------------------~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
...++........+.........+++.. +.+..+-...+.|..-+..+|.....+.
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 7777765544433332223344555432 3344555555666666666665444443
No 290
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.23 E-value=0.017 Score=50.84 Aligned_cols=39 Identities=33% Similarity=0.767 Sum_probs=30.4
Q ss_pred CCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++|...++.|.+.|+..++ +|+|.|+.||.|..| ++|..
T Consensus 82 d~C~~~~~~C~~~C~~~~g-~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQN-SVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp CGGGTGGGGCSSEEEEETT-EEEEECCTTEEECTTSSCEEE
T ss_pred CccccCCCCCCCEeECCCC-CEEEECCCCcEECCCCCccCc
Confidence 5677666778888887665 688999999988877 77865
No 291
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.22 E-value=4.8 Score=39.83 Aligned_cols=189 Identities=11% Similarity=0.026 Sum_probs=106.4
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCc----ceEEeeccCceeeeEEEccCC-EEEEEeCCCCeEEEEEc-CC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN----HRVLLERQGSVEGLAYEYVHN-YLYWTCNNDATINKIDL-DS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~----~~~i~~~~~~~~glAvDw~~~-~LYwtd~~~~~I~~~~~-~~ 387 (652)
..+.+++|.+..+.|+.+. ..+.|...+++... ...+......+..+++...++ .|+... ..+.|.+.++ .+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGS 89 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSS
T ss_pred CcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEeccC
Confidence 4577889998766666554 44777777766544 223334445788999998777 666554 5678988887 55
Q ss_pred CCCccEEEEEeC--CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecC---------CCceEEEEcCCCCCceEEEec
Q psy5768 388 PKAQRIVVVRLG--QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSG---------FGTESIITTDITMPNALALDH 456 (652)
Q Consensus 388 ~~~~~~~~~~~~--~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG---------~~~~~l~~~~l~~P~glaiD~ 456 (652)
.. ...+ .. ......+|++.| .++|+..... ..|...++.. ......+. .-..+..+++.+
T Consensus 90 ~~---~~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 90 PS---FQAL-TNNEANLGICRICKYG-DDKLIAASWD---GLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp SS---EEEC-BSCCCCSCEEEEEEET-TTEEEEEETT---SEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred Cc---eEec-cccCCCCceEEEEeCC-CCEEEEEcCC---CeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 32 2222 23 345678999999 6666665543 2565555543 11111111 112455677664
Q ss_pred CCCEEEEEeCCCCeEEEEecCC-Cc--eEEEecCCCCceeEEEEeC--CEEEEEcCCCCeEEEEE
Q psy5768 457 QAEKLFWGDARLDKIERCDYDG-TN--RIVLSKISPLHPFDMAVYG--EFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 457 ~~~~LYw~D~~~~~I~~~~ldG-~~--~~~l~~~~~~~p~glav~~--~~lYwtd~~~~~I~~~~ 516 (652)
. .|+.+ ...+.|...++.. .. ...........+.++++.. +.++.+-...+.|...+
T Consensus 161 ~--~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 161 S--RLIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp S--EEEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred C--cEEEE-eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEE
Confidence 4 35554 3456788888876 32 2222222224456777753 33444444455554433
No 292
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=94.21 E-value=0.016 Score=54.39 Aligned_cols=39 Identities=33% Similarity=0.767 Sum_probs=32.5
Q ss_pred CCCCCCCCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++|...++.|.+.|+..++ +|+|.|+.||.|..| ++|..
T Consensus 82 deC~~~~~~C~~~C~n~~g-sy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQN-SVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp CGGGTGGGGCSSEEEEETT-EEEEECCTTEEECTTSSCEEE
T ss_pred ccccCCCCCCCCEeECCCC-CeEEECCCCceeCCCCCcccc
Confidence 5687767789999987765 699999999999888 88875
No 293
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=94.21 E-value=0.99 Score=50.88 Aligned_cols=199 Identities=11% Similarity=0.035 Sum_probs=108.2
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-ecc------------------CceeeeEEEccCCEEEEEeCC
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQ------------------GSVEGLAYEYVHNYLYWTCNN 376 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~------------------~~~~glAvDw~~~~LYwtd~~ 376 (652)
+..++|.+..++|.++. .+.|+..++.+.....+. .+. ....++++.+.++.|+++...
T Consensus 112 ~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp BCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 34566777777776664 356777776554333332 111 122478888889988876432
Q ss_pred CC---------------------------------eEEEEEcCCCCCccEEEEEe-------CCCCCceEEEEeCCCCEE
Q psy5768 377 DA---------------------------------TINKIDLDSPKAQRIVVVRL-------GQHDKPRGIDIDSCDSRI 416 (652)
Q Consensus 377 ~~---------------------------------~I~~~~~~~~~~~~~~~~~~-------~~~~~P~~Iavdp~~g~L 416 (652)
.. +|.+.++.+.. ....+.+ .......+++..|. +.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~ 266 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPA--YVGPQEVPVPAMIASSDYYFSWLTWVTD-ERV 266 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHH--HHCCEECCCCHHHHTSCEEEEEEEESSS-SEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCC--ccceeEccCCccCCCCcceEEEeEEeCC-CeE
Confidence 11 45555554321 0000011 11123467889997 655
Q ss_pred EEE--ecCCCCCceEEEe----ecCCCceEEE----EcCCCCCc-----eEEEecCCCEEEEE-e--CCCCeEEEEecCC
Q psy5768 417 YWT--NWNSHLPSIQRAF----FSGFGTESII----TTDITMPN-----ALALDHQAEKLFWG-D--ARLDKIERCDYDG 478 (652)
Q Consensus 417 ywt--d~~~~~~~I~r~~----ldG~~~~~l~----~~~l~~P~-----glaiD~~~~~LYw~-D--~~~~~I~~~~ldG 478 (652)
.++ +......+|+..+ +++...+.+. ...-.+.. .+++.+++++||+. . .+...|+.+++++
T Consensus 267 ~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 267 CLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp EEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred EEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 555 3332223687777 5443333333 12222333 67888888888774 2 2345799999988
Q ss_pred CceEEEecCCCCceeEEEE-eCCEEEEEcCC------CCeEEEEEccCC
Q psy5768 479 TNRIVLSKISPLHPFDMAV-YGEFIFWTDWV------IHAVLRANKYTG 520 (652)
Q Consensus 479 ~~~~~l~~~~~~~p~glav-~~~~lYwtd~~------~~~I~~~~k~~g 520 (652)
...+.+.... ....++.. .++.||++... ...+++++..+|
T Consensus 347 ~~~~~lt~~~-~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 347 ENAIQITSGK-WEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp TTCEECSCSS-SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred CceEecccCc-eEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 7755554322 22223322 56788888654 346888876444
No 294
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.14 E-value=3.9 Score=46.54 Aligned_cols=191 Identities=13% Similarity=0.149 Sum_probs=113.9
Q ss_pred CCCeEEEeecccc----cEEEEec---cCC--cceEEeec--c----C--ceeeeEEE-ccCCEEEEEeCCCC----eEE
Q psy5768 324 KRKTLFYSDIQKG----TINSVFF---NGS--NHRVLLER--Q----G--SVEGLAYE-YVHNYLYWTCNNDA----TIN 381 (652)
Q Consensus 324 ~~~~lywsd~~~~----~I~~~~~---~g~--~~~~i~~~--~----~--~~~glAvD-w~~~~LYwtd~~~~----~I~ 381 (652)
..+++||+-...+ .++|... +|. ..++++.. + + ...+.++. +.++.|.|+....+ +|+
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~ 204 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIE 204 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEE
Confidence 4578888854332 3667766 554 45666622 1 1 35667888 88888877665432 499
Q ss_pred EEEcCCC-CCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCC-C-CceEEEeecCCCce--EEEEc-CCCCCceEEEe
Q psy5768 382 KIDLDSP-KAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH-L-PSIQRAFFSGFGTE--SIITT-DITMPNALALD 455 (652)
Q Consensus 382 ~~~~~~~-~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~-~-~~I~r~~ldG~~~~--~l~~~-~l~~P~glaiD 455 (652)
++++.+. ..-... +. ....+++..|....||++..... . .+|++..+++...+ .+... .-.+-.++++.
T Consensus 205 v~dl~~g~~~l~~~-~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 205 FKRISDPSQTIADK-VS----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp EEETTCTTCCCCCC-EE----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred EEECCCCCEeCCcc-cc----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 9998764 210001 11 01246788887778888765321 1 27999999776432 33332 11233467788
Q ss_pred cCCCEEEEEeC--CCCeEEEEecCCC--ce--EEEecCCCCceeEEE-EeCCEEEEE-cC---CCCeEEEEEccC
Q psy5768 456 HQAEKLFWGDA--RLDKIERCDYDGT--NR--IVLSKISPLHPFDMA-VYGEFIFWT-DW---VIHAVLRANKYT 519 (652)
Q Consensus 456 ~~~~~LYw~D~--~~~~I~~~~ldG~--~~--~~l~~~~~~~p~gla-v~~~~lYwt-d~---~~~~I~~~~k~~ 519 (652)
++++.|+|... ....|+.+++++. .. +.+.......-+++. ..++.||+. +. ....|++++..+
T Consensus 280 pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 280 ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 88999998753 3457888999875 23 444433322336665 447777775 43 245788888754
No 295
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=94.14 E-value=0.026 Score=43.52 Aligned_cols=27 Identities=19% Similarity=0.341 Sum_probs=22.1
Q ss_pred CCCCCCCCCCCCc--ccceecCCCceEEE
Q psy5768 236 GTNPCGVNNGGCA--ELCLYNGVSAVCAC 262 (652)
Q Consensus 236 ~~n~C~~~ng~Cs--~lC~~~~~~~~C~C 262 (652)
++++|......|. +.|++.+++|+|.|
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~ 30 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLP 30 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecc
Confidence 5789987667785 48999999999993
No 296
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.10 E-value=0.68 Score=47.19 Aligned_cols=177 Identities=8% Similarity=-0.060 Sum_probs=91.8
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc---cEEEEeC
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK---RETVVSQ 80 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~---~~~v~~~ 80 (652)
+++....+.|++++++......+....+ .-..+.++++++..++|+... ..+.|+.+++.... ....+..
T Consensus 26 l~~~~~d~~i~iw~~~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s---~d~~v~vwd~~~~~~~~~~~~~~~ 98 (377)
T 3dwl_C 26 FVTTTATNQVELYEQDGNGWKHARTFSD----HDKIVTCVDWAPKSNRIVTCS---QDRNAYVYEKRPDGTWKQTLVLLR 98 (377)
T ss_dssp EECCCSSSCBCEEEEETTEEEECCCBCC----CSSCEEEEEECTTTCCEEEEE---TTSSEEEC------CCCCEEECCC
T ss_pred EEEecCCCEEEEEEccCCceEEEEEEec----CCceEEEEEEeCCCCEEEEEe---CCCeEEEEEcCCCCceeeeeEecc
Confidence 3444456778888887653222211111 235789999999877777655 55778888776543 2222223
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc----EEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY----RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 156 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~----~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I 156 (652)
. ...+. .+++...++.|+... ..+.|.+.+++... ...+..........+++.|...+|+.... ...|
T Consensus 99 ~-~~~v~----~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i 170 (377)
T 3dwl_C 99 L-NRAAT----FVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA--DRKA 170 (377)
T ss_dssp C-SSCEE----EEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES--SSCE
T ss_pred c-CCceE----EEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC--CCEE
Confidence 3 34455 777766455555444 46778887776543 23332213456789999995555554433 3445
Q ss_pred EEEeCCCCC--------------c-EEEEe--ecccCceeEEEeccCCEEEEEeCC
Q psy5768 157 ARAGLDGKK--------------Q-TILAQ--EIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 157 ~~~~ldg~~--------------~-~~~~~--~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
...++.... + ..++. ..-.....+++++.+..|+....+
T Consensus 171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp EEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT
T ss_pred EEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC
Confidence 555543110 0 11111 112345677777766666655555
No 297
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=94.09 E-value=0.01 Score=53.09 Aligned_cols=41 Identities=29% Similarity=0.700 Sum_probs=34.1
Q ss_pred CCCCCCCCCCCCCcc-cceecCCCceEEEeCCc-cccCCCccc
Q psy5768 235 TGTNPCGVNNGGCAE-LCLYNGVSAVCACAHGV-VAQDGKSCS 275 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~-lC~~~~~~~~C~C~~G~-l~~dg~~C~ 275 (652)
.++++|..+++.|++ .|+..+++|+|.|+.|| +..++++|.
T Consensus 105 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 105 EDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp EECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred CccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 357889877778986 89988889999999998 557899884
No 298
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=94.05 E-value=0.01 Score=54.13 Aligned_cols=41 Identities=24% Similarity=0.554 Sum_probs=34.2
Q ss_pred CCCCCCCCCCCCCcc-cceecCCCceEEEeCCc-cccCCCccc
Q psy5768 235 TGTNPCGVNNGGCAE-LCLYNGVSAVCACAHGV-VAQDGKSCS 275 (652)
Q Consensus 235 ~~~n~C~~~ng~Cs~-lC~~~~~~~~C~C~~G~-l~~dg~~C~ 275 (652)
.++++|..+++.|.+ .|+..+++|+|.|+.|| +..|+++|.
T Consensus 120 ~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 120 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 457889876678985 89988889999999998 567899884
No 299
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=94.02 E-value=0.019 Score=39.43 Aligned_cols=21 Identities=38% Similarity=0.834 Sum_probs=18.2
Q ss_pred CCCCCCCeeecCC-CCcccCCC
Q psy5768 631 MRDCRPGYFKCDN-NKCILSSH 651 (652)
Q Consensus 631 ~~~C~~~~f~C~~-~~Ci~~~~ 651 (652)
...|++++|+|.| |+|||.+|
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~ 25 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLL 25 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGG
T ss_pred CCCCCCCeeECCCCCeEcCHhh
Confidence 3578999999999 99999875
No 300
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.83 E-value=0.029 Score=50.76 Aligned_cols=39 Identities=21% Similarity=0.446 Sum_probs=31.0
Q ss_pred CCCCCC-CCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHL-NGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~-ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++|... ++.|+|.|...++ +++|.|+.||.|..| ++|..
T Consensus 118 ~eC~~~~~~~C~~~C~n~~g-~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 118 NECTDFVDVPCSHFCNNFIG-GYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CTTTC-CCCCSSSEEEEETT-EEEEECCTTCEECTTSSCEEC
T ss_pred cccCCCCCCCCCCcccCcCC-CEEEecCCCcEECCCCCcccc
Confidence 567653 4679999987765 699999999999988 88864
No 301
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.81 E-value=6.8 Score=40.19 Aligned_cols=146 Identities=11% Similarity=-0.015 Sum_probs=88.8
Q ss_pred CeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC
Q psy5768 39 KISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT 118 (652)
Q Consensus 39 ~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d 118 (652)
.+.+++|++.+.+|+... ..+.|..+++........+... ...+. .+++...++.| ++-+..+.|.+-++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~---~d~~i~iwd~~~~~~~~~~~~h-~~~v~----~~~~~p~~~~l-~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGA---EDRLIRIWDIENRKIVMILQGH-EQDIY----SLDYFPSGDKL-VSGSGDRTVRIWDLR 195 (393)
T ss_dssp BEEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCC-SSCEE----EEEECTTSSEE-EEEETTSEEEEEETT
T ss_pred eEEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEccC-CCCEE----EEEEcCCCCEE-EEecCCCcEEEEECC
Confidence 378999999877777655 5688998998765444444444 45566 77777655545 454567888888887
Q ss_pred CCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEee-------cccCceeEEEeccCCEEEE
Q psy5768 119 GQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-------IIMPIKDITLDLKFFSAFY 191 (652)
Q Consensus 119 g~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~-------~~~~p~gl~lD~~~~~ly~ 191 (652)
.......+.. ......+++.|.+|.++.+-. ....|...++........+.. --.....+++++.+..|+-
T Consensus 196 ~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~s-~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 196 TGQCSLTLSI-EDGVTTVAVSPGDGKYIAAGS-LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp TTEEEEEEEC-SSCEEEEEECSTTCCEEEEEE-TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred CCeeEEEEEc-CCCcEEEEEECCCCCEEEEEc-CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 6544433332 356788999986676665533 244566666543332211110 0234566777766666655
Q ss_pred EeCC
Q psy5768 192 RNLS 195 (652)
Q Consensus 192 ~d~~ 195 (652)
...|
T Consensus 274 ~s~d 277 (393)
T 1erj_A 274 GSLD 277 (393)
T ss_dssp EETT
T ss_pred EeCC
Confidence 5554
No 302
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=93.81 E-value=0.034 Score=44.23 Aligned_cols=55 Identities=24% Similarity=0.579 Sum_probs=33.2
Q ss_pred CCCCCCCCCCcc-ccccCCCCceeeeccCceeeccCCcccCcccccCCCceeeccCeecCC
Q psy5768 549 TPCRHLNGNCDD-ICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPF 608 (652)
Q Consensus 549 ~~C~~~ng~Cs~-lCl~~~~~~~~C~Cp~g~~l~~d~~C~~~~~~C~~~~f~C~~g~Ci~~ 608 (652)
++|.. +..|.| .|+..++ +|+|.|+.||.+ ..++|.. ...|.. .-.|.++.|+..
T Consensus 6 deC~~-~~~C~~g~C~n~~g-~y~C~C~~Gy~~-~g~~C~d-ideC~~-~~~C~~~~C~n~ 61 (82)
T 1emn_A 6 DECKE-PDVCKHGQCINTDG-SYRCECPFGYIL-AGNECVD-TDECSV-GNPCGNGTCKNV 61 (82)
T ss_dssp CSSSS-TTSCSSSEECCCSS-CCCEECCTTEEE-ETTEEEE-CCGGGT-CCTTSSSCEEEC
T ss_pred ccCCC-CCCcCCCEEEecCC-CEEEECCCCeEC-CCCccCC-cccccC-CCCCCCCEeECC
Confidence 44443 233443 6777665 699999999987 2367764 344542 224556667653
No 303
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=93.78 E-value=0.025 Score=44.99 Aligned_cols=39 Identities=23% Similarity=0.640 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCcc-cceecCCCceEEEeCCccccCCCcccc
Q psy5768 236 GTNPCGVNNGGCAE-LCLYNGVSAVCACAHGVVAQDGKSCSE 276 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~-lC~~~~~~~~C~C~~G~l~~dg~~C~~ 276 (652)
++++|.. +..|.+ .|+..+.+|+|.|+.||.. +|+.|.+
T Consensus 4 dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~-~g~~C~d 43 (82)
T 1emn_A 4 DMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL-AGNECVD 43 (82)
T ss_dssp CCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE-ETTEEEE
T ss_pred ccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC-CCCccCC
Confidence 5688876 457876 8998888999999999954 5777753
No 304
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.71 E-value=6.3 Score=39.47 Aligned_cols=173 Identities=9% Similarity=-0.056 Sum_probs=100.4
Q ss_pred EEecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc--cE--EEE
Q psy5768 4 AVSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK--RE--TVV 78 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~--~~--~v~ 78 (652)
+++....+.|+++|.. ++....+... -..+..++++|.++.|.... ..+.|..+++.... .. ..+
T Consensus 70 l~s~s~Dg~v~iWd~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~s~~---~d~~v~iw~~~~~~~~~~~~~~~ 139 (340)
T 1got_B 70 LLSASQDGKLIIWDSYTTNKVHAIPLR-------SSWVMTCAYAPSGNYVACGG---LDNICSIYNLKTREGNVRVSREL 139 (340)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECS-------SSCEEEEEECTTSSEEEEEE---TTCEEEEEETTTCSBSCEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCCcceEeecC-------CccEEEEEECCCCCEEEEEe---CCCeEEEEECccCCCcceeEEEe
Confidence 3444456788888866 4444444432 24688999999888877665 45778878776431 11 112
Q ss_pred eCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5768 79 SQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIAR 158 (652)
Q Consensus 79 ~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~ 158 (652)
... ...+. .+++.. +..+.+-+..+.|.+.++........+.+-......+++.|. |.++.+-. ....|..
T Consensus 140 ~~h-~~~v~----~~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sg~-~d~~v~~ 210 (340)
T 1got_B 140 AGH-TGYLS----CCRFLD--DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGA-CDASAKL 210 (340)
T ss_dssp ECC-SSCEE----EEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEE-TTSCEEE
T ss_pred cCC-CccEE----EEEECC--CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC-CCEEEEEe-CCCcEEE
Confidence 223 33444 555542 333445556778888887654444444433456789999984 44545432 2456666
Q ss_pred EeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 159 AGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 159 ~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
-++........+...-...+.+++.+.++.|.....|
T Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp EETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 6665433322222223456788888877766666655
No 305
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=93.66 E-value=0.028 Score=39.66 Aligned_cols=22 Identities=32% Similarity=0.698 Sum_probs=19.2
Q ss_pred CCCCCCCCCeeecCCC-CcccCCC
Q psy5768 629 CAMRDCRPGYFKCDNN-KCILSSH 651 (652)
Q Consensus 629 C~~~~C~~~~f~C~~~-~Ci~~~~ 651 (652)
|. ..|.+++|+|.|| +||+.+|
T Consensus 3 C~-~~C~~~~F~C~~g~~CI~~~~ 25 (48)
T 2i1p_A 3 MV-LNCTSAQFKCADGSSCINSRY 25 (48)
T ss_dssp SC-CCCCSSSEECSSSSCEECGGG
T ss_pred CC-CCCCCCeeECCCCCEeCCHhh
Confidence 65 5799999999999 8999876
No 306
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.66 E-value=5.7 Score=44.42 Aligned_cols=176 Identities=13% Similarity=0.049 Sum_probs=103.0
Q ss_pred EEEecCCCCeEEEEecCCC------eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEE
Q psy5768 3 IAVSSPTQSKIVVCNLEGE------YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRET 76 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~ 76 (652)
++++....+.|+++++... ....+.. .-..+..|++++...+|.-.. ..+.|..+++.......
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-------h~~~v~~v~~s~~g~~l~sgs---~Dg~v~vwd~~~~~~~~ 466 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-------HSHFVEDVVLSSDGQFALSGS---WDGELRLWDLAAGVSTR 466 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-------CSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTTEEEE
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecC-------CCCcEEEEEECCCCCEEEEEe---CCCcEEEEECCCCccee
Confidence 4555556678888887632 2233332 235788999999877777554 56889889887543333
Q ss_pred EEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCC---CCCceeEEEcCCCC-eEEEEecCC
Q psy5768 77 VVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG---VDQPSALAVDPESG-YLFWSESGK 152 (652)
Q Consensus 77 v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~---~~~P~~iavd~~~g-~lywtd~~~ 152 (652)
.+... ...+. ++++...++.| .+-+..+.|.+.+..+.....+.... ......+++.|... .++.+-. .
T Consensus 467 ~~~~h-~~~v~----~~~~s~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~ 539 (694)
T 3dm0_A 467 RFVGH-TKDVL----SVAFSLDNRQI-VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS-W 539 (694)
T ss_dssp EEECC-SSCEE----EEEECTTSSCE-EEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE-T
T ss_pred EEeCC-CCCEE----EEEEeCCCCEE-EEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe-C
Confidence 33444 45567 88887655555 44445678888887776554443322 12356778877532 2333322 2
Q ss_pred CCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 153 ~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
...|..-++........+...-.....+++++.++.|.-...|
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 4456666665544333232223456777887766655555555
No 307
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.63 E-value=7.3 Score=39.95 Aligned_cols=203 Identities=12% Similarity=0.043 Sum_probs=111.8
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEE
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIV 394 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~ 394 (652)
+.+++|.+..+.|+... ..+.|...++........+ .....+..|++.+.++.|+ +-+..++|.+-++... +.
T Consensus 126 v~~v~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~----~~ 199 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGA-EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTG----QC 199 (393)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT----EE
T ss_pred EEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCC----ee
Confidence 56788887665555443 4577877777654333333 3344678899988887775 4456688888887542 23
Q ss_pred EEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE-------cCCCCCceEEEecCCCEEEEEeCC
Q psy5768 395 VVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT-------TDITMPNALALDHQAEKLFWGDAR 467 (652)
Q Consensus 395 ~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~-------~~l~~P~glaiD~~~~~LYw~D~~ 467 (652)
............+++.|..|.++.+-.... .|...++........+. ..-.....+++.+.++.|+-+. .
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~--~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~ 276 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDR--AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-L 276 (393)
T ss_dssp EEEEECSSCEEEEEECSTTCCEEEEEETTS--CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-T
T ss_pred EEEEEcCCCcEEEEEECCCCCEEEEEcCCC--cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe-C
Confidence 333334467889999996666555543322 44444443322111110 0112456788888877776553 3
Q ss_pred CCeEEEEecCCCce------------EEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 468 LDKIERCDYDGTNR------------IVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 468 ~~~I~~~~ldG~~~------------~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.+.|...++..... ...+........++++.. +....+-...+.|..-+..+|+....+.
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 45677777653211 111111223345666652 3333444455667766776776555544
No 308
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.57 E-value=9.1 Score=44.54 Aligned_cols=198 Identities=12% Similarity=0.019 Sum_probs=113.1
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccE
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRI 393 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~ 393 (652)
..+.+++|++..+.|.... ..+.|+..+..+.........-..+..|++.+ ++.|. +-+..++|.+-++.... ..
T Consensus 18 ~~V~~lafspdg~~lAsgs-~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~--~~ 92 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIAT-VTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQK--VL 92 (902)
T ss_dssp SCEEEEEEETTTTEEEEEE-TTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCS--EE
T ss_pred CCcEEEEECCCCCEEEEEe-CCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCc--EE
Confidence 4578899999877665554 34677777665432222223344688999998 66454 44556888888886432 12
Q ss_pred EEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE-----------cCCCCCceEEEecCCCEEE
Q psy5768 394 VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT-----------TDITMPNALALDHQAEKLF 462 (652)
Q Consensus 394 ~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~-----------~~l~~P~glaiD~~~~~LY 462 (652)
..+ .......+++++|...+|+..... +.|...++++.....+.. ........|++.+.+..+.
T Consensus 93 ~~~--~~~~~V~~v~~sp~g~~l~sgs~d---g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 93 TTV--FVPGKITSIDTDASLDWMLIGLQN---GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EEE--ECSSCEEEEECCTTCSEEEEEETT---SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EEE--cCCCCEEEEEECCCCCEEEEEcCC---CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 222 233567899999988888877654 366666666543211110 0123457888887654444
Q ss_pred EEeCCCCeEEEEecCCCceEEEecCC------------------CCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCce
Q psy5768 463 WGDARLDKIERCDYDGTNRIVLSKIS------------------PLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEE 522 (652)
Q Consensus 463 w~D~~~~~I~~~~ldG~~~~~l~~~~------------------~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~ 522 (652)
.+-...+.| ..|+........+... .....++++. ++..+.+-...+.|..-+..+|+.
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 444555677 7787765433222211 0224566665 233444444455555555555543
No 309
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.55 E-value=7.4 Score=39.72 Aligned_cols=179 Identities=8% Similarity=-0.034 Sum_probs=106.2
Q ss_pred EEecCCCCeEEEEecCCC-eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC--CccEEEEeC
Q psy5768 4 AVSSPTQSKIVVCNLEGE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG--TKRETVVSQ 80 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg--s~~~~v~~~ 80 (652)
+++....+.|.++|+... ....+..... ......+..+++.+.++.++.+- ...+.|..+++.. ..... +..
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~sg--s~D~~v~~wd~~~~~~~~~~-~~~ 247 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFP--SGHTADVLSLSINSLNANMFISG--SCDTTVRLWDLRITSRAVRT-YHG 247 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSS--SSCCSCEEEEEECSSSCCEEEEE--ETTSCEEEEETTTTCCCCEE-ECC
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccC--CCCccCeEEEEeecCCCCEEEEE--ECCCeEEEEECCCCCcceEE-ECC
Confidence 444456678889988744 3344432111 12345788999988777777666 5678898888763 23333 333
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCC-------CCCceeEEEcCCCCeEEEEecCCC
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG-------VDQPSALAVDPESGYLFWSESGKI 153 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~-------~~~P~~iavd~~~g~lywtd~~~~ 153 (652)
. ...+. .+++.+ .++.+.+-+..+.|.+.++............ ......+++.|...+|+-.. ..
T Consensus 248 h-~~~v~----~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~d 319 (380)
T 3iz6_a 248 H-EGDIN----SVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY--SN 319 (380)
T ss_dssp C-SSCCC----EEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC--TT
T ss_pred c-CCCeE----EEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE--CC
Confidence 3 45577 888886 4456666667888999998765444333321 11256899998555554432 24
Q ss_pred CeEEEEeCCCCCcE-EEE---eecccCceeEEEeccCCEEEEEeCC
Q psy5768 154 PLIARAGLDGKKQT-ILA---QEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 154 ~~I~~~~ldg~~~~-~~~---~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
..|..-++...... .+. ..--...+.|++.+.+..|.-...|
T Consensus 320 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 56666665433222 221 1113456788888877766655555
No 310
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=93.43 E-value=0.034 Score=39.54 Aligned_cols=21 Identities=24% Similarity=0.718 Sum_probs=18.0
Q ss_pred CCCCCCCeeecC-CCCcccCCC
Q psy5768 631 MRDCRPGYFKCD-NNKCILSSH 651 (652)
Q Consensus 631 ~~~C~~~~f~C~-~~~Ci~~~~ 651 (652)
...|.+++|+|. +|+||+.+|
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~ 25 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERW 25 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTT
T ss_pred CCCCCCCcEEcCCCCeEcChhh
Confidence 357899999995 899999876
No 311
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.43 E-value=6.4 Score=38.67 Aligned_cols=206 Identities=10% Similarity=0.018 Sum_probs=115.0
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.+++|.+....|.-+. ..+.|...++........+ .....+..+++.+.++.|+-. +..++|.+-++....
T Consensus 14 ~~V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~--- 88 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTL-YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGE--- 88 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCC---
T ss_pred CceEEEEECCCCCEEEEEc-CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCc---
Confidence 4577899998776666554 4577877777643322222 333456788898877776644 556888888875422
Q ss_pred EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCc-eEEEEcCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGT-ESIITTDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 393 ~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~-~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
.............+|+++|...+|+-.... ..|...++..... .......-.....+++.+..+.++.+-...+.|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 222222344667899999977766654443 2555555543322 222222223456888887555444444455677
Q ss_pred EEEecCCCce-EEEecCCCCceeEEEEe---CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 472 ERCDYDGTNR-IVLSKISPLHPFDMAVY---GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 472 ~~~~ldG~~~-~~l~~~~~~~p~glav~---~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
...++..... ..+..........+++. ++.+..+-...+.|..-+..+++....+.
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence 7778754332 22222221222334432 23344444455666666666665554444
No 312
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.14 E-value=3.8 Score=46.57 Aligned_cols=175 Identities=9% Similarity=0.006 Sum_probs=97.7
Q ss_pred CCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECC--CCEEEEEeccCCcceEEEEEcCCCccEE--EEeCCCc
Q psy5768 8 PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPV--KGKMFWSNVTKQVVTIEMAFMDGTKRET--VVSQKKY 83 (652)
Q Consensus 8 ~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~lyw~d~~~~~~~I~~~~~dgs~~~~--v~~~~~~ 83 (652)
...+.|.++++++.....+....+ .-..+.+|++.+. .+.|+-.. ..+.|+.+++++..... ..... .
T Consensus 28 ~~dg~I~vwd~~~~~~~~~~~l~~----h~~~V~~l~~s~~~~~~~l~s~s---~Dg~I~vwd~~~~~~~~~~~~~~h-~ 99 (753)
T 3jro_A 28 SSDKTIKIFEVEGETHKLIDTLTG----HEGPVWRVDWAHPKFGTILASCS---YDGKVLIWKEENGRWSQIAVHAVH-S 99 (753)
T ss_dssp ETTTEEEEEEEETTEEEEEEEECC----CSSCEEEEEECCTTSCSEEEEEE---TTSCEEEEEEETTEEEEEEEECCC-S
T ss_pred ECCCcEEEEecCCCCCccceeccC----CcCceEEEEecCCCCCCEEEEEe---CCCeEEEEECCCCcccccccccCC-C
Confidence 356788888886443333222111 2357899999876 56666554 56788888887654222 22223 4
Q ss_pred CCccCCCCcEEEEccC-CcEEEEeCCCCEEEEEEcCCC--cEEEEEeCCCCCceeEEEcCC------------CCeEEEE
Q psy5768 84 PAVTACNLHIAVDWIA-QNIYWSDPKENVIEVARLTGQ--YRYVLISGGVDQPSALAVDPE------------SGYLFWS 148 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~-~~lY~~d~~~~~I~v~~~dg~--~~~~l~~~~~~~P~~iavd~~------------~g~lywt 148 (652)
..+. .+++.... ++++++-+..+.|.+.++... ...............++.+|. +|.++.+
T Consensus 100 ~~V~----~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~s 175 (753)
T 3jro_A 100 ASVN----SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175 (753)
T ss_dssp SCEE----EEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEE
T ss_pred CCeE----EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEE
Confidence 4566 77777652 455555556789999988754 222233333456778888885 2444444
Q ss_pred ecCCCCeEEEEeCCCCCcE-EEEe---ecccCceeEEEecc---CCEEEEEeCC
Q psy5768 149 ESGKIPLIARAGLDGKKQT-ILAQ---EIIMPIKDITLDLK---FFSAFYRNLS 195 (652)
Q Consensus 149 d~~~~~~I~~~~ldg~~~~-~~~~---~~~~~p~gl~lD~~---~~~ly~~d~~ 195 (652)
-. ..+.|...++...... .+.. ..-.....+++.+. +..|+-...+
T Consensus 176 gs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 176 GG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp EE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred EE-CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 32 2345555555433221 2111 11234567777766 4444444444
No 313
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.09 E-value=13 Score=41.35 Aligned_cols=203 Identities=9% Similarity=-0.025 Sum_probs=119.2
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc------eEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcC
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH------RVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLD 386 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~------~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~ 386 (652)
...+.++++.+.+..++.+-...+.|...++..... ..+......+..+++.+.++.|. +-+..++|.+-++.
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLA 460 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETT
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEE-EEeCCCcEEEEECC
Confidence 355778888887777888777778888777654221 12223345678899998777665 55567889888875
Q ss_pred CCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcC---CCCCceEEEecCCC-EEE
Q psy5768 387 SPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD---ITMPNALALDHQAE-KLF 462 (652)
Q Consensus 387 ~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~---l~~P~glaiD~~~~-~LY 462 (652)
.. ..............+++++|...+|.-.... ..|...++.+.....+.... ..+...+++.+... .+.
T Consensus 461 ~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 461 AG---VSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp TT---EEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred CC---cceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 42 1221222345677899999977766655433 24544455443322222111 12345677776542 333
Q ss_pred EEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCCce
Q psy5768 463 WGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTGEE 522 (652)
Q Consensus 463 w~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g~~ 522 (652)
.+-...+.|...++........+........+|++.. +.++.+-...+.|..-+..+++.
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 4444556788888876655444443334556777763 34555555566666666655543
No 314
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.08 E-value=6.8 Score=37.94 Aligned_cols=201 Identities=11% Similarity=0.094 Sum_probs=109.2
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.+++| +..+.|+.. ...+.|...+++.......+ .....+..+++.+.++.|+... ..+.|.+.++.......
T Consensus 19 ~~v~~~~~-~~~~~l~s~-~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASV-SRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGED 95 (313)
T ss_dssp SCEEEEEE-EETTEEEEE-ETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSC
T ss_pred CCcEEEEe-cCCCEEEEE-EcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCC
Confidence 45677888 555555544 45577888777654433333 4456789999999887776554 46778877776543221
Q ss_pred EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEec-CCCEEEEEeCCCCeE
Q psy5768 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDH-QAEKLFWGDARLDKI 471 (652)
Q Consensus 393 ~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~-~~~~LYw~D~~~~~I 471 (652)
.............+++.++ ++|+..... +.|...+ .+..... +...-.....+++.+ ..+.|+.+ ...+.|
T Consensus 96 ~~~~~~~~~~~i~~~~~~~--~~l~~~~~d---~~i~~~d-~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i 167 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQD--GVVISGSWD---KTAKVWK-EGSLVYN-LQAHNASVWDAKVVSFSENKFLTA-SADKTI 167 (313)
T ss_dssp C-CEECCCSSCEEEEEEET--TEEEEEETT---SEEEEEE-TTEEEEE-EECCSSCEEEEEEEETTTTEEEEE-ETTSCE
T ss_pred cccchhhcccCEEEEEecC--CEEEEEeCC---CCEEEEc-CCcEEEe-cccCCCceeEEEEccCCCCEEEEE-ECCCCE
Confidence 1111122335566777753 455555433 2444433 2221111 222223445677766 45555544 344567
Q ss_pred EEEecCCCceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 472 ERCDYDGTNRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
...+ .+.....+..........+++. ++. +++-...+.|...+..+++....+.
T Consensus 168 ~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 168 KLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEEE-TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEe-cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh
Confidence 7666 2222222222122445667765 445 5555566777777777676655554
No 315
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.03 E-value=2.7 Score=47.88 Aligned_cols=178 Identities=10% Similarity=0.033 Sum_probs=100.2
Q ss_pred EecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECC--CCEEEEEeccCCcceEEEEEcCCC--ccEEEEeC
Q psy5768 5 VSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPV--KGKMFWSNVTKQVVTIEMAFMDGT--KRETVVSQ 80 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~lyw~d~~~~~~~I~~~~~dgs--~~~~v~~~ 80 (652)
++....+.|+++++.......+....+ ....+..++++|. .+.++... ..+.|..+++... ........
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~~~~~~~~----h~~~V~~v~~sp~~~~~~l~sgs---~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWSQIAVHAV----HSASVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECC----CSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEECCSSSCCCCEEEEC
T ss_pred EEEeCCCeEEEEECCCCcccccccccC----CCCCeEEEEECCCCCCCEEEEEe---CCCcEEEEEeecCCCcceeEeec
Confidence 333456778888887664322222111 3357899999998 66777665 6688888887754 22222333
Q ss_pred CCcCCccCCCCcEEEEcc------------CCcEEEEeCCCCEEEEEEcCCCc-E---EEEEeCCCCCceeEEEcCCC--
Q psy5768 81 KKYPAVTACNLHIAVDWI------------AQNIYWSDPKENVIEVARLTGQY-R---YVLISGGVDQPSALAVDPES-- 142 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~------------~~~lY~~d~~~~~I~v~~~dg~~-~---~~l~~~~~~~P~~iavd~~~-- 142 (652)
. ...+. .+++... .+.+..+-+..+.|.+.++.... . ...+.........+++.|..
T Consensus 144 ~-~~~v~----~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 144 H-AIGVN----SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp C-SSCEE----EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred C-CCceE----EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence 3 34456 7777653 24455555567788888876432 1 11222223567889999963
Q ss_pred CeEEEEecCCCCeEEEEeCCCCCc---EEEEee--cccCceeEEEeccCCEEEEEeCC
Q psy5768 143 GYLFWSESGKIPLIARAGLDGKKQ---TILAQE--IIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 143 g~lywtd~~~~~~I~~~~ldg~~~---~~~~~~--~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
|.++.+-. ..+.|..-++..... ..+... .-..+.++++++.+..|+....|
T Consensus 219 ~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 219 RSYLASVS-QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp SEEEEEEE-SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred CCEEEEEe-cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 55555432 244566655543211 111111 12345678888776666655555
No 316
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=92.65 E-value=0.038 Score=37.03 Aligned_cols=18 Identities=33% Similarity=0.695 Sum_probs=16.1
Q ss_pred CCCCeeecCC--CCcccCCC
Q psy5768 634 CRPGYFKCDN--NKCILSSH 651 (652)
Q Consensus 634 C~~~~f~C~~--~~Ci~~~~ 651 (652)
|++++|+|.+ |+|||.+|
T Consensus 1 C~~~~f~C~~~~g~Cip~~~ 20 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSW 20 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTS
T ss_pred CCCCceecCCCCCCEeCccc
Confidence 7889999987 89999887
No 317
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=92.63 E-value=0.043 Score=37.41 Aligned_cols=20 Identities=25% Similarity=0.564 Sum_probs=17.0
Q ss_pred CCCCCCeeecCC-CCcccCCC
Q psy5768 632 RDCRPGYFKCDN-NKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~~-~~Ci~~~~ 651 (652)
..|.+++|+|.+ |+||+.+|
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~ 22 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRW 22 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGG
T ss_pred CCCCCCceEeCCCCeEcChhh
Confidence 368999999985 99999875
No 318
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=92.41 E-value=0.042 Score=38.52 Aligned_cols=20 Identities=30% Similarity=0.924 Sum_probs=17.2
Q ss_pred CCCCCCeeecC-----CCCcccCCC
Q psy5768 632 RDCRPGYFKCD-----NNKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~-----~~~Ci~~~~ 651 (652)
..|++++|+|. +|+|||.+|
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~ 29 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDW 29 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccc
Confidence 57899999998 799999876
No 319
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=92.28 E-value=0.031 Score=55.08 Aligned_cols=41 Identities=20% Similarity=0.520 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCcc--cceecCCCceEEEeCCccccCCCccccc
Q psy5768 236 GTNPCGVNNGGCAE--LCLYNGVSAVCACAHGVVAQDGKSCSEY 277 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~--lC~~~~~~~~C~C~~G~l~~dg~~C~~~ 277 (652)
++++|......|++ .|++.+++|+|.|..||. .||+.|.+.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~-GnG~~C~d~ 46 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYT-GNGRQCVAE 46 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEE-ECSSSEEET
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC-CCCCcCCCC
Confidence 57899877778974 699999999999999996 489999843
No 320
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=92.23 E-value=0.025 Score=52.74 Aligned_cols=54 Identities=26% Similarity=0.548 Sum_probs=36.4
Q ss_pred CCCCCCCCCCCCccccccCCCCceeeeccCceeeccCCcccCcccccCCC--ceeecc-CeecCC
Q psy5768 547 AKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEH--DFKCSD-GMCIPF 608 (652)
Q Consensus 547 ~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d~~C~~~~~~C~~~--~f~C~~-g~Ci~~ 608 (652)
..+||. || .|+..++ +|+|.|+.||.+....+|.. ...|... ...|.+ +.|+..
T Consensus 9 ~~~pC~--ng----~C~~~~g-~~~C~C~~G~~g~~~~~C~~-id~C~~~~~~~~C~~~~~C~~~ 65 (186)
T 1z1y_A 9 VDTICX--NG----QLVQMSN-HFXCMCNEGLVHLSENTCEE-XNECXXETLGXACGEFGQCIEN 65 (186)
T ss_dssp TTCCCB--TE----EEEECSS-CEEEEECTTEEEEETTEEEE-CCCCSGGGTTSEEETTEEEEEC
T ss_pred CCCCCC--CC----EeECCCC-CeEeECCCCCccCCCCccCC-CCcccCCCCCCCCCCCCEeecC
Confidence 458887 44 4666665 69999999999874477874 3556533 345765 477754
No 321
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.21 E-value=0.99 Score=45.93 Aligned_cols=163 Identities=8% Similarity=0.002 Sum_probs=85.0
Q ss_pred CCCeEEEEecCCCe----eEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc----cEEEEeC
Q psy5768 9 TQSKIVVCNLEGEY----QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK----RETVVSQ 80 (652)
Q Consensus 9 ~~~~I~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~----~~~v~~~ 80 (652)
..+.|.+++++... ...+.. .-..+..+++++....|+... ..+.|..++++... ...+...
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLR-------LNRAATFVRWSPNEDKFAVGS---GARVISVCYFEQENDWWVSKHLKRP 144 (377)
T ss_dssp TTSSEEEC------CCCCEEECCC-------CSSCEEEEECCTTSSCCEEEE---SSSCEEECCC-----CCCCEEECSS
T ss_pred CCCeEEEEEcCCCCceeeeeEecc-------cCCceEEEEECCCCCEEEEEe---cCCeEEEEEECCcccceeeeEeecc
Confidence 45667777776543 222221 235789999999877777665 56788888777543 3333221
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc---------------EEEEEe--CCCCCceeEEEcCCCC
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY---------------RYVLIS--GGVDQPSALAVDPESG 143 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~---------------~~~l~~--~~~~~P~~iavd~~~g 143 (652)
. ...+. .+++...++ +..+-+..+.|.+.++.... ...++. ........+++.|...
T Consensus 145 h-~~~v~----~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 145 L-RSTIL----SLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGN 218 (377)
T ss_dssp C-CSCEE----EEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSS
T ss_pred c-CCCeE----EEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCC
Confidence 3 44566 888876444 44444456778888874110 111111 2234577899999666
Q ss_pred eEEEEecCCCCeEEEEeCCCCCc----EEEEeecccCceeEEEeccCCEE
Q psy5768 144 YLFWSESGKIPLIARAGLDGKKQ----TILAQEIIMPIKDITLDLKFFSA 189 (652)
Q Consensus 144 ~lywtd~~~~~~I~~~~ldg~~~----~~~~~~~~~~p~gl~lD~~~~~l 189 (652)
+|+.... ...|...++..... ...+.........+++.+.+..|
T Consensus 219 ~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 266 (377)
T 3dwl_C 219 ALAYAGH--DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV 266 (377)
T ss_dssp CEEEEET--TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEE
T ss_pred EEEEEeC--CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEE
Confidence 6665543 45666666554333 11111122346777777654433
No 322
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.12 E-value=10 Score=37.80 Aligned_cols=165 Identities=15% Similarity=0.114 Sum_probs=93.5
Q ss_pred EEecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeC-C
Q psy5768 4 AVSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ-K 81 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~-~ 81 (652)
+++....+.|+++|+. ++...++..+ -..+.+|+++|.+..|+-.. ..+.|..+++.+......... +
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h-------~~~v~~v~~sp~~~~l~s~~---~d~~i~~wd~~~~~~~~~~~~~~ 160 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGH-------QSEVYSVAFSPDNRQILSAG---AEREIKLWNILGECKFSSAEKEN 160 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECC-------CSCEEEEEECSSTTEEEEEE---TTSCEEEEESSSCEEEECCTTTS
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCC-------CCcEEEEEECCCCCEEEEEc---CCCEEEEEeccCCceeeeecccC
Confidence 4444566788889886 5555555542 25789999999888887655 567888888875532222111 1
Q ss_pred CcCCccCCCCcEEEEccCC---------cEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCC
Q psy5768 82 KYPAVTACNLHIAVDWIAQ---------NIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~---------~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~ 152 (652)
....+. .+++..... .++.+-+..+.|.+.+.++.....+. .-......+++.|...+|.-.. .
T Consensus 161 ~~~~v~----~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs--~ 233 (343)
T 2xzm_R 161 HSDWVS----CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGG--K 233 (343)
T ss_dssp CSSCEE----EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEE--T
T ss_pred CCceee----eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEc--C
Confidence 022234 555554331 34555556778888886655444332 2235678899998544444333 3
Q ss_pred CCeEEEEeCC-CCCcEEEEeecccCceeEEEeccC
Q psy5768 153 IPLIARAGLD-GKKQTILAQEIIMPIKDITLDLKF 186 (652)
Q Consensus 153 ~~~I~~~~ld-g~~~~~~~~~~~~~p~gl~lD~~~ 186 (652)
...|..-++. .......... -...+.+++++..
T Consensus 234 dg~v~iwd~~~~~~~~~~~~~-~~~v~~v~~sp~~ 267 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREFDA-GSTINQIAFNPKL 267 (343)
T ss_dssp TCEEEEEESSCCSSCSEEEEC-SSCEEEEEECSSS
T ss_pred CCeEEEEECCCCcccceeecC-CCcEEEEEECCCC
Confidence 4566666662 2222222211 1235566665543
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.02 E-value=0.68 Score=44.05 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=74.7
Q ss_pred CCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC-------CccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCC
Q psy5768 37 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG-------TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKE 109 (652)
Q Consensus 37 ~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg-------s~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~ 109 (652)
+.++..++++| ++.||-.. .+.+++.+... .....|-..+ ...-. .+++| .+++||.+. .
T Consensus 40 w~~~~~laf~P-~G~LYaV~----~G~Ly~~~~~t~~~~~W~~s~t~IG~~G-w~~F~----a~~fD-~~G~LYav~--d 106 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGVL----NDKIYKGTPPTHDNDNWMGRAKKIGNGG-WNQFQ----FLFFD-PNGYLYAVS--K 106 (236)
T ss_dssp CTTCSEEEECT-TSCEEEEE----TTEEEEESCCCSTTCCHHHHCEEEECSC-GGGCS----EEEEC-TTSCEEEEE--T
T ss_pred cccceeEEECC-CccEEEEe----CCeEEEECCCCCCcccccccccEecccc-cccce----EEEEC-CCCCEEEeC--C
Confidence 67888999999 89999875 46799988743 1234455556 55567 89999 589999993 4
Q ss_pred CEEEEEEc--CCCc-----EEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5768 110 NVIEVARL--TGQY-----RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 159 (652)
Q Consensus 110 ~~I~v~~~--dg~~-----~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~ 159 (652)
++|.+.+. ++.. -..+...+-..-..|+.+| +|.||-.. . ..+.|.
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d--g~lyr~ 159 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G--QQFYKA 159 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T--TEEEEE
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C--CcEEec
Confidence 89999876 4432 1344444444558999999 89999887 3 346553
No 324
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=91.91 E-value=0.044 Score=43.29 Aligned_cols=24 Identities=21% Similarity=0.578 Sum_probs=20.3
Q ss_pred CCCCCCCCCCeeecC-CCCcccCCC
Q psy5768 628 YCAMRDCRPGYFKCD-NNKCILSSH 651 (652)
Q Consensus 628 ~C~~~~C~~~~f~C~-~~~Ci~~~~ 651 (652)
.|....|++++|+|. +|+|||.+|
T Consensus 3 ~C~~~~C~~~~f~C~~~g~CIp~~~ 27 (80)
T 2kny_A 3 KLEGKTCGPSSFSCPGTHVCVPERW 27 (80)
T ss_dssp SCSSCCCSSSEEECTTSSCEEEHHH
T ss_pred CCCCCCCCCCceecCCCCeEcChhh
Confidence 377789999999998 689999754
No 325
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=91.70 E-value=0.1 Score=57.69 Aligned_cols=50 Identities=20% Similarity=0.358 Sum_probs=29.5
Q ss_pred CCCCCCCCCCCCCCccccccCCCCceee-eccCceeeccCCcccCcccccCCCceeec
Q psy5768 545 ACAKTPCRHLNGNCDDICKLDETGQVVC-SCFTGKVLMEDNRSCTINTVCSEHDFKCS 601 (652)
Q Consensus 545 ~~~~~~C~~~ng~Cs~lCl~~~~~~~~C-~Cp~g~~l~~d~~C~~~~~~C~~~~f~C~ 601 (652)
.|..+||.. ++ .|+..+.++|+| .||.||.. ..++|.. ...|....-.|.
T Consensus 5 eC~~nPC~~-gg----~C~n~~~Gsy~C~~C~~GytG-dg~~CeD-iDEC~~~p~~C~ 55 (634)
T 1yo8_A 5 GCLSNPCFP-GA----QCSSFPDGSWSCGFCPVGFLG-NGTHCED-LDECALVPDICF 55 (634)
T ss_dssp GGGGCCSCT-TC----CEEECTTSCEEECCCCTTBCS-CSSSCCB-CCTTTTSCCCSC
T ss_pred ccCCCCCCC-CC----EEecCCCCCeECCcCCCccCC-CCCCccc-cccccCCCCccc
Confidence 344566652 22 577777667999 99999973 2267764 334543333344
No 326
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=91.59 E-value=0.088 Score=53.52 Aligned_cols=44 Identities=34% Similarity=0.758 Sum_probs=36.0
Q ss_pred CCCCCCCC-CCCCcccceecCCCceEEEeCCc-cccCCCcccccce
Q psy5768 236 GTNPCGVN-NGGCAELCLYNGVSAVCACAHGV-VAQDGKSCSEYDA 279 (652)
Q Consensus 236 ~~n~C~~~-ng~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~~~ 279 (652)
+.++|... ++.|.|.|+...++|+|.|+.|| +..++++|.+.++
T Consensus 42 ~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~ 87 (317)
T 3h5c_B 42 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQ 87 (317)
T ss_dssp CSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECSS
T ss_pred CcccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccccc
Confidence 68999863 47899999988889999999998 4568889985443
No 327
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.47 E-value=21 Score=39.93 Aligned_cols=58 Identities=10% Similarity=0.025 Sum_probs=34.1
Q ss_pred CeEEEEecCCCceEEEecCCCCceeE--EEEeCCEEEEEcCCCCeEEEEEccCCceEEEEec
Q psy5768 469 DKIERCDYDGTNRIVLSKISPLHPFD--MAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 469 ~~I~~~~ldG~~~~~l~~~~~~~p~g--lav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~ 528 (652)
+.|..+|+......--.... ..+.+ ++..++.+|.. ...+.++.++..+|+.+..+..
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeC
Confidence 56777777533222111111 11222 44457788887 4678899999888987766653
No 328
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.20 E-value=24 Score=40.04 Aligned_cols=433 Identities=11% Similarity=0.009 Sum_probs=204.5
Q ss_pred CCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeC-----C-Cc
Q psy5768 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ-----K-KY 83 (652)
Q Consensus 10 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~-----~-~~ 83 (652)
...|++++........+....... .....+..|..| .++.|++.. ....|++++......+.+... . .-
T Consensus 136 ~~gl~~~~~~~~~~~~~~~~~~~~-l~~~~i~~i~~d-~~g~lwigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (781)
T 3v9f_A 136 YRGIEYLDIATGKFTHYNKSTVPA-LPSEQTWTATEA-EDGKLYIGH---VEGGLSILSLNDKSVKHFVHDPQNPNSLPG 210 (781)
T ss_dssp SSCEEEEETTTTEEEEESTTTCTT-CSCCCEEEEEEE-ETTEEEEEE---TTTEEEEEETTTTEEEEECC--------CC
T ss_pred CCCeeEEECCCCeEEeeccCcccC-CCccceEEEEEC-CCCCEEEEe---cCCCeEEEcCCCCceEeeecCCCCcccCCC
Confidence 456777777655554443211100 112457788887 468888765 334788888765533332111 0 01
Q ss_pred CCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeC-------CCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5768 84 PAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG-------GVDQPSALAVDPESGYLFWSESGKIPLI 156 (652)
Q Consensus 84 ~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~-------~~~~P~~iavd~~~g~lywtd~~~~~~I 156 (652)
..+. .|+.|. .++|++.-. . -+.+.+........+... .....+.|..|. +|.|+....+ ..|
T Consensus 211 ~~i~----~i~~d~-~g~lwigt~-~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~--~Gl 280 (781)
T 3v9f_A 211 NDVR----CIYKDT-NGNIWIGTS-K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLK-DNKLWIATEL--NGI 280 (781)
T ss_dssp SSEE----EEEECT-TCCEEEEET-T-EEEEEETTTTEEEC-----------CCCCEEEEEECT-TSEEEEEESS--SCE
T ss_pred Ccee----EEEEcC-CCCEEEEeC-C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECC-CCCEEEEeCC--CCe
Confidence 2344 778885 556665543 3 677777654332222111 124577889996 7888776531 367
Q ss_pred EEEeCCCCCcEEEEe-------e-----c--ccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCC
Q psy5768 157 ARAGLDGKKQTILAQ-------E-----I--IMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSY 222 (652)
Q Consensus 157 ~~~~ldg~~~~~~~~-------~-----~--~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 222 (652)
.+.+.+......+.. . . -.....|..|.. +.|++...++|- ..+ +.....
T Consensus 281 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~-g~lWigt~~~Gl-~~~--~~~~~~------------ 344 (781)
T 3v9f_A 281 MILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSF-NNIWIGTWGGGI-NFI--SNAPPT------------ 344 (781)
T ss_dssp EEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSS-CCEEEEEBSSCE-EEE--CSSCCS------------
T ss_pred EEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCC-CCEEEEecCCeE-EEe--CCCCCc------------
Confidence 777665443322221 1 1 123456677753 344333333332 111 000000
Q ss_pred cceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEee-ecceeEEecCCCCCCC
Q psy5768 223 LKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSR-VNRIDSIHMTDKSDLN 301 (652)
Q Consensus 223 ~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~ 301 (652)
.+.|..... + ...++ +....-.+.+.. .+.-|.+++ ...|.+++. .....
T Consensus 345 ---~~~~~~~~~---~--~~~~~-------l~~~~v~~i~~d------------~~g~lWigt~~~Gl~~~~~-~~~~~- 395 (781)
T 3v9f_A 345 ---FHTWSYSPT---Q--MNESS-------LSNKVVSSVCDD------------GQGKLWIGTDGGGINVFEN-GKRVA- 395 (781)
T ss_dssp ---CEEEC-------C--CCSSC-------CSSSCEEEEEEC------------TTSCEEEEEBSSCEEEEET-TEEEE-
T ss_pred ---ceeeccCcc---c--cccCC-------CCCcceEEEEEc------------CCCCEEEEeCCCcEEEEEC-CCCeE-
Confidence 011110000 0 00000 000011122221 122344544 455666554 11110
Q ss_pred CCceeeee--ccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee---ccCceeeeEEEccCCEEEEEeCC
Q psy5768 302 SPFESIRN--STMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE---RQGSVEGLAYEYVHNYLYWTCNN 376 (652)
Q Consensus 302 ~p~~~~~~--~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~---~~~~~~glAvDw~~~~LYwtd~~ 376 (652)
..+.. ......+.++..|. .+.|++... .+.|++++......+.+.. ....+..|+.|. .++|++...
T Consensus 396 ---~~~~~~~~~~~~~v~~i~~d~-~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~- 468 (781)
T 3v9f_A 396 ---IYNKENRELLSNSVLCSLKDS-EGNLWFGTY-LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH- 468 (781)
T ss_dssp ---ECC-----CCCSBEEEEEECT-TSCEEEEET-TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET-
T ss_pred ---EEccCCCCCCCcceEEEEECC-CCCEEEEec-cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC-
Confidence 00000 00113466777775 455666543 3557777765433222221 124677888885 456666543
Q ss_pred CCeEEEEEcCCCCCccEEEEEeC----CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc-CC--CCC
Q psy5768 377 DATINKIDLDSPKAQRIVVVRLG----QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-DI--TMP 449 (652)
Q Consensus 377 ~~~I~~~~~~~~~~~~~~~~~~~----~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-~l--~~P 449 (652)
+.+.+++..+.. ........ ....+.+|+.|+ .|.|+++..+ ..+.+.+.++...+.+... .+ ...
T Consensus 469 -~Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~l~~~~i 541 (781)
T 3v9f_A 469 -AGVFVIDLASKK--VIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFG---GGVGIYTPDMQLVRKFNQYEGFCSNTI 541 (781)
T ss_dssp -TEEEEEESSSSS--CCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESS---SCEEEECTTCCEEEEECTTTTCSCSCE
T ss_pred -CceEEEeCCCCe--EEecccCcccccccceeEEEEEcC-CCCEEEEEcC---CCEEEEeCCCCeEEEccCCCCCCCCee
Confidence 568888765422 11221111 025678999998 6788877653 1577766554432222211 12 123
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecC-CC--CceeEEEEe-CCEEEEEcCCCCeEEEEEccCC
Q psy5768 450 NALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKI-SP--LHPFDMAVY-GEFIFWTDWVIHAVLRANKYTG 520 (652)
Q Consensus 450 ~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~-~~--~~p~glav~-~~~lYwtd~~~~~I~~~~k~~g 520 (652)
.+|..|. .++|+.+.. .+-|.+++......+.+... ++ ....+|+.+ ++.|+.+. .+.|.++++.++
T Consensus 542 ~~i~~d~-~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 542 NQIYRSS-KGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYITSKK 612 (781)
T ss_dssp EEEEECT-TSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEETTTT
T ss_pred EEEEECC-CCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEECCCC
Confidence 5777774 456666554 33337777665444433221 22 245788877 46777764 345777776543
No 329
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=91.08 E-value=0.047 Score=46.79 Aligned_cols=38 Identities=24% Similarity=0.581 Sum_probs=29.8
Q ss_pred CCCCCCCCCCCCcccceecCCCceEEEeCCc-cccC-CCcc
Q psy5768 236 GTNPCGVNNGGCAELCLYNGVSAVCACAHGV-VAQD-GKSC 274 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~-l~~d-g~~C 274 (652)
++++|.. +..|.+.|+..+++|+|.|+.|| +..+ +++|
T Consensus 79 dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 79 DIDECEN-GGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp ECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred cccccCC-CCCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 4688876 35788899988889999999998 4445 6665
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.06 E-value=11 Score=35.85 Aligned_cols=149 Identities=10% Similarity=-0.008 Sum_probs=85.7
Q ss_pred ccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc----cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceE
Q psy5768 354 RQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ----RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQ 429 (652)
Q Consensus 354 ~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~----~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~ 429 (652)
+......||+++ ++.||-+ ..+.+.+++....... ..+.+-......-.++.+|| +|.||...- ++|+
T Consensus 39 gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~d----G~iy 110 (236)
T 1tl2_A 39 GWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVSK----DKLY 110 (236)
T ss_dssp SCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEET----TEEE
T ss_pred ccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeCC----CEEE
Confidence 456788999999 8889998 4678998886331111 23344333445578999998 899999822 4999
Q ss_pred EEee--cCCCc-----eEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecC-CC------ceEEEecCCCCceeEE
Q psy5768 430 RAFF--SGFGT-----ESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYD-GT------NRIVLSKISPLHPFDM 495 (652)
Q Consensus 430 r~~l--dG~~~-----~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ld-G~------~~~~l~~~~~~~p~gl 495 (652)
|..- +|... ..+....-..-..|..|++ +.||-+. .+++++-..- +. ...++.... .+-+-+
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~-G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g-~~~yr~ 186 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN-GYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGG-WDTFKF 186 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT-SCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSS-GGGEEE
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEECCC-ceEEEEe--CCcEEecCCCCCCCcccccccceeccCC-cceEEE
Confidence 8876 44332 2222222222357777755 6777766 3445543222 11 112222222 233333
Q ss_pred EEe--CCEEEEEcCCCCeEEEEE
Q psy5768 496 AVY--GEFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 496 av~--~~~lYwtd~~~~~I~~~~ 516 (652)
.++ ++.||+.+ .+.+++..
T Consensus 187 l~f~~~G~l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 187 LFFSSVGTLFGVQ--GGKFYEDY 207 (236)
T ss_dssp EEECTTSCEEEEE--TTEEEEES
T ss_pred EEECCCCcEEEEe--CCeEEecC
Confidence 333 45777777 66677654
No 331
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.52 E-value=15 Score=37.78 Aligned_cols=198 Identities=11% Similarity=0.109 Sum_probs=103.1
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc-----------eEEee-cc------------CceeeeEEEccCC-
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH-----------RVLLE-RQ------------GSVEGLAYEYVHN- 368 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~-----------~~i~~-~~------------~~~~glAvDw~~~- 368 (652)
..+.+++|++..+.|.... ..+.|...++..... ...+. .. ..+..|++.+.++
T Consensus 29 ~~V~~v~~s~~g~~la~g~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGD-KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GSEEEEEECSSSSEEEEEE-TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred CcEEEEEECCCCCEEEEEc-CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 4578899998666665554 346777777654321 11122 11 4477788877652
Q ss_pred EEEEEeCCCCeEEEEEcCCCCCc-------------------------------------cEEEEEeCCCCCceEEEEeC
Q psy5768 369 YLYWTCNNDATINKIDLDSPKAQ-------------------------------------RIVVVRLGQHDKPRGIDIDS 411 (652)
Q Consensus 369 ~LYwtd~~~~~I~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~P~~Iavdp 411 (652)
.++.+-+..+.|.+-++...... ....+.........+++++|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 34445556677776665421000 00011123345678899999
Q ss_pred CCCEEEEEecCCCCCceEEEeec-CCCceEEE-------EcCCCCCceEEEecCC-CEEEEEeCCCCeEEEEecCCCce-
Q psy5768 412 CDSRIYWTNWNSHLPSIQRAFFS-GFGTESII-------TTDITMPNALALDHQA-EKLFWGDARLDKIERCDYDGTNR- 481 (652)
Q Consensus 412 ~~g~Lywtd~~~~~~~I~r~~ld-G~~~~~l~-------~~~l~~P~glaiD~~~-~~LYw~D~~~~~I~~~~ldG~~~- 481 (652)
...+| .+- .. ..|...++. +.....++ ...-.....+++++.+ ..|+.+ ...+.|...++.....
T Consensus 188 ~~~~l-~s~-~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 188 DYETY-LSA-DD--LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS-SSKGTIRLCDMRASALC 262 (447)
T ss_dssp TSSEE-EEE-CS--SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE-ETTSCEEEEETTTCSSS
T ss_pred CCCEE-EEe-CC--CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE-eCCCeEEEEECcCCccc
Confidence 65544 443 22 366666665 22111111 0112345788998887 555544 4456788888876543
Q ss_pred ----EEEecCCC-----------CceeEEEEeC--CEEEEEcCCCCeEEEEEccC
Q psy5768 482 ----IVLSKISP-----------LHPFDMAVYG--EFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 482 ----~~l~~~~~-----------~~p~glav~~--~~lYwtd~~~~~I~~~~k~~ 519 (652)
+.+..... ....+|++.. .+|..... +.|...+..+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 33322111 1456677653 35554443 6666555543
No 332
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.31 E-value=17 Score=36.84 Aligned_cols=182 Identities=12% Similarity=0.072 Sum_probs=97.1
Q ss_pred EEEecCC-CCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcC-CCccEEEEeC
Q psy5768 3 IAVSSPT-QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD-GTKRETVVSQ 80 (652)
Q Consensus 3 i~v~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~d-gs~~~~v~~~ 80 (652)
+++++.+ .+.|+++|++........... ..+.+|+|+|...+|.... ...+.++... |.........
T Consensus 148 la~as~~~d~~i~iwd~~~~~~~~~~~~~-------~~V~~v~fspdg~~l~s~s----~~~~~~~~~~~~~~~~~~~~~ 216 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTEKFEIETR-------GEVKDLHFSTDGKVVAYIT----GSSLEVISTVTGSCIARKTDF 216 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEEEEEEECS-------SCCCEEEECTTSSEEEEEC----SSCEEEEETTTCCEEEEECCC
T ss_pred EEEEECCCCCEEEEeECCCCcEEEEeCCC-------CceEEEEEccCCceEEecc----ceeEEEEEeccCcceeeeecC
Confidence 4455543 466888888755443333221 3588999999877776544 3455555543 4432222222
Q ss_pred CCcCCccCCCCcEEEEccCCcEEEEeC-CCC--EEEEEEcCCCcEEE----EEeCCCCCceeEEEcCCCCeEEEEecCCC
Q psy5768 81 KKYPAVTACNLHIAVDWIAQNIYWSDP-KEN--VIEVARLTGQYRYV----LISGGVDQPSALAVDPESGYLFWSESGKI 153 (652)
Q Consensus 81 ~~~~~p~~~~~~lavDw~~~~lY~~d~-~~~--~I~v~~~dg~~~~~----l~~~~~~~P~~iavd~~~g~lywtd~~~~ 153 (652)
+.-..+. .+++...+..+..+.. ... .|...+........ .+.+.......+++.|...+|.-.. ..
T Consensus 217 ~~~~~v~----~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs--~D 290 (365)
T 4h5i_A 217 DKNWSLS----KINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS--ND 290 (365)
T ss_dssp CTTEEEE----EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE--TT
T ss_pred CCCCCEE----EEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc--CC
Confidence 1123355 7787765555544322 122 34444443332221 1223334567899999555554443 24
Q ss_pred CeEEEEeCCCCCc-EEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEE
Q psy5768 154 PLIARAGLDGKKQ-TILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHII 202 (652)
Q Consensus 154 ~~I~~~~ldg~~~-~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i 202 (652)
..|..-++..... ..+...--...++|++.+.+.+|.=...| +..|+.
T Consensus 291 ~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D-~tvrvw 339 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA-NTIHII 339 (365)
T ss_dssp SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT-SEEEEE
T ss_pred CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC-CeEEEE
Confidence 4666666643222 22221113467899999887777666666 455544
No 333
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=90.30 E-value=0.058 Score=48.13 Aligned_cols=37 Identities=19% Similarity=0.545 Sum_probs=26.9
Q ss_pred CCCCCCCCCCCCcc-cceecCCCceEEEeCCcc-ccCCCcc
Q psy5768 236 GTNPCGVNNGGCAE-LCLYNGVSAVCACAHGVV-AQDGKSC 274 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~-lC~~~~~~~~C~C~~G~l-~~dg~~C 274 (652)
++++|+. ..|.+ .|+..+++|+|.|++||. ..++++|
T Consensus 3 dideC~~--~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C 41 (147)
T 2w86_A 3 DIDECES--SPCINGVCKNSPGSFICECSSESTLDPTKTIC 41 (147)
T ss_dssp CCCGGGG--CCSBTSEEEEETTEEEEECCTTEEECTTSSBE
T ss_pred cCccCcC--CCCCCCEeECCCCCEEeECCCCcccCCCCCee
Confidence 4677875 35765 899888899999999984 3344444
No 334
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=90.10 E-value=0.09 Score=36.79 Aligned_cols=20 Identities=30% Similarity=0.924 Sum_probs=17.3
Q ss_pred CCCCCCeeecC-----CCCcccCCC
Q psy5768 632 RDCRPGYFKCD-----NNKCILSSH 651 (652)
Q Consensus 632 ~~C~~~~f~C~-----~~~Ci~~~~ 651 (652)
..|++++|+|. +++|||.+|
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~ 27 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDW 27 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGG
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhh
Confidence 46899999998 789999876
No 335
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=89.97 E-value=0.058 Score=48.99 Aligned_cols=40 Identities=20% Similarity=0.486 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCC-cccceecCCCceEEEeCCc-cccCCCcccc
Q psy5768 236 GTNPCGVNNGGC-AELCLYNGVSAVCACAHGV-VAQDGKSCSE 276 (652)
Q Consensus 236 ~~n~C~~~ng~C-s~lC~~~~~~~~C~C~~G~-l~~dg~~C~~ 276 (652)
++|+|+.. ..| .+.|+..+.+|+|.|+.|| +..+|++|.+
T Consensus 2 dideC~~~-~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d 43 (162)
T 1uzk_A 2 DVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43 (162)
T ss_dssp CCCGGGST-TSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred ccccCCCC-CCCCCCEeECCCCCEEEeCCCCCeECCCCCcccC
Confidence 46888753 356 4689988889999999999 4567888864
No 336
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.49 E-value=17 Score=35.78 Aligned_cols=204 Identities=12% Similarity=0.052 Sum_probs=113.1
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcce------EEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHR------VLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~------~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
..+.++++.+..+.++.+-...+.|..-++.+.... .+......+..+++...++.|+ +-+..++|.+-++..
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~-s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL-SASWDKTLRLWDVAT 96 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE-EEeCCCEEEEEECCC
Confidence 446778888776666676666677776665532211 1112344678889988777665 445668888888754
Q ss_pred CCCccEEEEE-eCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCC-----CEE
Q psy5768 388 PKAQRIVVVR-LGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQA-----EKL 461 (652)
Q Consensus 388 ~~~~~~~~~~-~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~-----~~L 461 (652)
. +.+.. ........+++++|...+|.-.... ..|....+.+.....+.. .-.+...+++.+.. ..+
T Consensus 97 ~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 97 G----ETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIKGQCLATLLG-HNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp T----EEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETTSCEEEEECC-CSSCEEEEEECCC------CCE
T ss_pred C----CeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeEEEEec-cCCcEEEEEEccCCCCCCCccE
Confidence 2 22222 2344667899999966555544433 255555666543333221 12234455555432 223
Q ss_pred EEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCCceEEEE
Q psy5768 462 FWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTGEEVYTL 526 (652)
Q Consensus 462 Yw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g~~~~~~ 526 (652)
+.+-...+.|...++........+........++++.. +.++.+-...+.|..-+..+++....+
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 33434456677777765544333333334456777652 344444445566666666655544444
No 337
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=89.28 E-value=20 Score=36.30 Aligned_cols=208 Identities=10% Similarity=-0.035 Sum_probs=112.7
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC--
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA-- 390 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~-- 390 (652)
..+.+++|.+..+.|+-. ...+.|...++........+ .....+..+++.+.++.|. +-+..+.|.+.++.....
T Consensus 67 ~~V~~~~~sp~~~~l~s~-s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la-s~~~d~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSA-SQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA-CGGLDSACSIFNLSSQADRD 144 (380)
T ss_dssp SCEEEEEECTTSSCEEEE-ETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE-ECCSSSCCEEEECCCCSSCC
T ss_pred cEEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE-EeeCCCcEEEEECCCCcccc
Confidence 457788888866555444 44577777776544333223 3344678899998777665 444556676666643210
Q ss_pred -c--cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcC-----CCCCceEEEecCCCEEE
Q psy5768 391 -Q--RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD-----ITMPNALALDHQAEKLF 462 (652)
Q Consensus 391 -~--~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~-----l~~P~glaiD~~~~~LY 462 (652)
. ...++ .........++..|..+..+.|-... ..|...++........+... ......+++....+.++
T Consensus 145 ~~~~~~~~~-~gh~~~v~~~~~~~~~~~~l~s~s~D--~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 145 GNMPVSRVL-TGHKGYASSCQYVPDQETRLITGSGD--QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp CSSTTCCBC-CCCSSCCCCCBCCSSSSSCEEEECTT--SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred CCccceeec-cCCCcceEEEEEecCCCCEEEEECCC--CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 0 00011 11223345566667555444443332 25555555443332222111 12334666766556666
Q ss_pred EEeCCCCeEEEEecCC--CceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 463 WGDARLDKIERCDYDG--TNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 463 w~D~~~~~I~~~~ldG--~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.+-...+.|...|+.. ...+++ ........+|++.. +..+.+-...+.|..-+..+|....++.
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEECCCeEEEEECCCCCcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 6655667788888752 233333 22224457788763 4556666677778777877776555443
No 338
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=89.22 E-value=19 Score=35.85 Aligned_cols=173 Identities=10% Similarity=-0.003 Sum_probs=92.5
Q ss_pred EEecCCCCeEEEEecCCC--------eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccE
Q psy5768 4 AVSSPTQSKIVVCNLEGE--------YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRE 75 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~ 75 (652)
+++....+.|+++++... ....+.. ....+..+++++.+..|+-.. ..+.|..+++......
T Consensus 42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-------h~~~V~~~~~~~~~~~l~s~s---~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-------HNHFVSDLALSQENCFAISSS---WDKTLRLWDLRTGTTY 111 (343)
T ss_dssp EEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-------CSSCEEEEEECSSTTEEEEEE---TTSEEEEEETTSSCEE
T ss_pred EEEEcCCCEEEEEECCcCCcccccccccchhcc-------CCCceEEEEECCCCCEEEEEc---CCCcEEEEECCCCcEE
Confidence 444445567777776532 1222222 235788999998777766443 5688888887643322
Q ss_pred EEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEe--CCCCCceeEEEcCCC----------C
Q psy5768 76 TVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS--GGVDQPSALAVDPES----------G 143 (652)
Q Consensus 76 ~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~--~~~~~P~~iavd~~~----------g 143 (652)
..+... ...+. .+++.+.++.|+ +-+..+.|.+.++.+........ ........++..|.. .
T Consensus 112 ~~~~~h-~~~v~----~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 2xzm_R 112 KRFVGH-QSEVY----SVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAP 185 (343)
T ss_dssp EEEECC-CSCEE----EEEECSSTTEEE-EEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCC
T ss_pred EEEcCC-CCcEE----EEEECCCCCEEE-EEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCC
Confidence 223333 44566 888876555454 44456788888887654333221 111234566666543 2
Q ss_pred eEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 144 YLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 144 ~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
+|.-..+ ...|..-+..+.....+. ..-...+.+++++.+..|.-...|
T Consensus 186 ~l~s~~~--d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~d 234 (343)
T 2xzm_R 186 YFASVGW--DGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGGKD 234 (343)
T ss_dssp EEEEEET--TSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEcC--CCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEcCC
Confidence 3333322 345555554332222221 112355677777766665555554
No 339
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.19 E-value=34 Score=38.78 Aligned_cols=430 Identities=11% Similarity=0.085 Sum_probs=201.0
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCC-
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK- 81 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~- 81 (652)
|.|++ .+++.++|........+..... . ....+..|..| .++.|++.. . ..|++++........ +..+
T Consensus 101 lWigT--~~Gl~~yd~~~~~f~~~~~~~~-~--~~~~i~~i~~d-~~g~lwi~t--~--~gl~~~~~~~~~~~~-~~~~~ 169 (795)
T 4a2l_A 101 VWIGT--RDGLSRYDEEKDIFQNFFYEKN-G--KHLQVNGIEEI-SPEQLLIST--P--EGLIMFDIKESKFID-DSFST 169 (795)
T ss_dssp EEEEE--SSCEEEEETTTTEEEEECCEET-T--EECCCCEEEEE-ETTEEEEEE--T--TEEEEEETTTTEEEC-SSSCH
T ss_pred EEEEe--CCchheeCCCCCeEEecccccc-C--CCceEEEEEEC-CCCCEEEEE--C--CceEEEECCCCEEEe-ccCCC
Confidence 44554 3567788776544444432110 0 01117778887 468888776 3 578888765332111 1111
Q ss_pred CcCC-ccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEe-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5768 82 KYPA-VTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARA 159 (652)
Q Consensus 82 ~~~~-p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~-~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~ 159 (652)
.... +. .|+.|. .++||+.- ..+-|.+.+........+.. ......+.|..|+ .|.|+...++ ..|.+.
T Consensus 170 ~~~~~i~----~i~~d~-~g~lwigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lwigt~~--~Gl~~~ 240 (795)
T 4a2l_A 170 AMHKTIA----STLYRQ-GDQIYIGT-STDGLYTYSITQKTFEKVIPILGTKQIQAILQQS-PTRIWVATEG--AGLFLI 240 (795)
T ss_dssp HHHTCCE----EEEEEE-TTEEEEEE-SSSCEEEEETTTCCEEECC----CCCEEEEEEEE-TTEEEEEEBS--SCEEEE
T ss_pred CCCcceE----EEEECC-CCCEEEEE-CCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcC-CCCEEEEECC--CCeEEE
Confidence 0112 55 788884 56676653 23357777765543332211 1124567888887 6787766432 357777
Q ss_pred eCCCCCcEEEEeec-------ccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeec
Q psy5768 160 GLDGKKQTILAQEI-------IMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKD 232 (652)
Q Consensus 160 ~ldg~~~~~~~~~~-------~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~ 232 (652)
+........+.... -.....|..|. .++|++.... |- ..+ +..+.. +..|...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~-Gl-~~~--~~~~~~---------------~~~~~~~ 300 (795)
T 4a2l_A 241 NPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWIGTFN-DL-NIY--HEGTDS---------------FASYSSN 300 (795)
T ss_dssp ETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEEEESS-CE-EEE--ETTTTE---------------EEEECCC
T ss_pred eCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEEEeCC-hh-heE--cCCCCe---------------EEEEecC
Confidence 66543333322110 12355666664 3444443332 21 111 100000 0001000
Q ss_pred cCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEee-ecceeEEecCCCCCCCCCceeeee--
Q psy5768 233 AQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSR-VNRIDSIHMTDKSDLNSPFESIRN-- 309 (652)
Q Consensus 233 ~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~~p~~~~~~-- 309 (652)
. .++ ++ + ....-.+.+. +.+.-|.+++ ...|..++. .... +..+..
T Consensus 301 ~---~~~----~~------l-~~~~i~~i~~------------D~~g~lWigt~~~Gl~~~~~-~~~~----~~~~~~~~ 349 (795)
T 4a2l_A 301 P---VEN----GS------L-SQRSVRSIFM------------DSQGGMWLGTYFGGLNYYHP-IRNR----FKNIRNIP 349 (795)
T ss_dssp T---TST----TS------C-SSSCEEEEEE------------CTTSCEEEEESSSCEEEECG-GGGS----SEEECCCT
T ss_pred C---CCC----CC------C-CCCcEEEEEE------------eCCcCEEEEECCCCeEEeCC-Cccc----ceEEcCCC
Confidence 0 000 00 0 0001111111 1112233333 234444433 1111 011100
Q ss_pred -cc--ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-e------c--cCceeeeEEEccCCEEEEEeCCC
Q psy5768 310 -ST--MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-E------R--QGSVEGLAYEYVHNYLYWTCNND 377 (652)
Q Consensus 310 -~~--~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~------~--~~~~~glAvDw~~~~LYwtd~~~ 377 (652)
.. .-..+.++..|.. +.|++.. ..+-|.+++......+.+. . + ...+.+|+.|..++.|++. ...
T Consensus 350 ~~~~l~~~~V~~i~~d~~-g~lWiGt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~~ 426 (795)
T 4a2l_A 350 YKNSLSDNVVSCIVEDKD-KNLWIGT-NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-THA 426 (795)
T ss_dssp TSSSCSCSSEEEEEECTT-SCEEEEE-SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ETT
T ss_pred CCCCCCCCeeEEEEECCC-CCEEEEE-CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eCc
Confidence 00 0134667777764 4455543 3345777776543333222 1 1 2357789998654425544 334
Q ss_pred CeEEEEEcCCCCCccEEEEEe----CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc----CC--C
Q psy5768 378 ATINKIDLDSPKAQRIVVVRL----GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT----DI--T 447 (652)
Q Consensus 378 ~~I~~~~~~~~~~~~~~~~~~----~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~----~l--~ 447 (652)
+.|.+++..+.. ...+.. .......+|+.|+ .|.|++...+ .+.+.+.+....+.+... .+ .
T Consensus 427 ~Gl~~~d~~~~~---~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 427 GGLSILHRNSGQ---VENFNQRNSQLVNENVYAILPDG-EGNLWLGTLS----ALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp TEEEEEETTTCC---EEEECTTTSCCSCSCEEEEEECS-SSCEEEEESS----CEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred CceeEEeCCCCc---EEEeecCCCCcCCCeeEEEEECC-CCCEEEEecC----ceeEEeCCCCeEEEccccccccccCCc
Confidence 567777764321 111211 0124678899998 6778877642 566666544322222111 11 2
Q ss_pred CCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEec--C--CC--CceeEEEEeC-CEEEEEcCCCCeEEEEEccCC
Q psy5768 448 MPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSK--I--SP--LHPFDMAVYG-EFIFWTDWVIHAVLRANKYTG 520 (652)
Q Consensus 448 ~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~--~--~~--~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g 520 (652)
....|..|. .++||.+.. +-+.+++.++... .+.. . .+ ....+|..+. +.|+.+... .+++.+..++
T Consensus 499 ~i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~ 572 (795)
T 4a2l_A 499 QITTLFRDS-HKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDK 572 (795)
T ss_dssp CEEEEEECT-TCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTT
T ss_pred eEEEEEECC-CCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCC
Confidence 346777884 466777664 4577877765433 2221 1 11 2456677664 566655432 6778776544
No 340
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=89.12 E-value=0.27 Score=32.58 Aligned_cols=34 Identities=29% Similarity=0.642 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCcc--cceecCCCceEEEeCCccccCCCccc
Q psy5768 237 TNPCGVNNGGCAE--LCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 237 ~n~C~~~ng~Cs~--lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
.++|.. ..|.+ .|+....+|+|.|+.||. |..|.
T Consensus 3 ~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~~---G~~Ce 38 (39)
T 1edm_B 3 GDQCES--NPCLNGGSCKDDINSYECWCPFGFE---GKNCE 38 (39)
T ss_dssp CCTTTT--CCCCTTCEEEEETTEEEEECCTTCC---STTSC
T ss_pred cccCCC--CCCCCCCEeEcCCCceEeECCCCCc---CCccC
Confidence 455653 24543 577777789999999983 55553
No 341
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.04 E-value=19 Score=35.73 Aligned_cols=143 Identities=6% Similarity=-0.042 Sum_probs=80.6
Q ss_pred EEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccE-EEEeC-C
Q psy5768 4 AVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRE-TVVSQ-K 81 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~-~v~~~-~ 81 (652)
+++....+.|.++|++......+.... .-..+..++++|....|.-.. ..+.|+.+++...... ..+.. .
T Consensus 142 l~s~s~dg~i~~wd~~~~~~~~~~~~~-----~~~~i~~~~~~pdg~~lasg~---~dg~i~iwd~~~~~~~~~~~~~~h 213 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDSQYIVHSAK-----SDVEYSSGVLHKDSLLLALYS---PDGILDVYNLSSPDQASSRFPVDE 213 (343)
T ss_dssp EEEEETTCCEEEEESSSSCEEEEECCC-----SSCCCCEEEECTTSCEEEEEC---TTSCEEEEESSCTTSCCEECCCCT
T ss_pred EEEEeCCCcEEEEECCCCcEEEEEecC-----CCCceEEEEECCCCCEEEEEc---CCCEEEEEECCCCCCCccEEeccC
Confidence 444446678888988765553333211 223588999998765555433 6788998988754432 23333 3
Q ss_pred CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeC--CCCCc---eeEEEcCCCCeEEEEecCCCCeE
Q psy5768 82 KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG--GVDQP---SALAVDPESGYLFWSESGKIPLI 156 (652)
Q Consensus 82 ~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~--~~~~P---~~iavd~~~g~lywtd~~~~~~I 156 (652)
...+. .|++...+..|..+. .+.|.+.++........+.. .-..+ ..++++|...+|.-... ....|
T Consensus 214 -~~~v~----~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~-~d~~i 285 (343)
T 3lrv_A 214 -EAKIK----EVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN-ESNSL 285 (343)
T ss_dssp -TSCEE----EEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET-TTTEE
T ss_pred -CCCEE----EEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC-CCCcE
Confidence 45566 888877555555554 34888888865432111110 00011 35999996656655333 13355
Q ss_pred EEEeCC
Q psy5768 157 ARAGLD 162 (652)
Q Consensus 157 ~~~~ld 162 (652)
...+++
T Consensus 286 ~v~~~~ 291 (343)
T 3lrv_A 286 TIYKFD 291 (343)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 555554
No 342
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.72 E-value=21 Score=35.80 Aligned_cols=148 Identities=7% Similarity=-0.050 Sum_probs=87.3
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEcc-CCcEEEEeCCCCEEEEEE
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWI-AQNIYWSDPKENVIEVAR 116 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~-~~~lY~~d~~~~~I~v~~ 116 (652)
..+.++++.+.+..|+-.. ..+.|..+++........+... ...+. .+++.+. .+++.++-+..+.|.+.+
T Consensus 155 ~~v~~~~~~~~~~~l~t~s---~D~~v~lwd~~~~~~~~~~~~h-~~~v~----~~~~~~~~~g~~l~sgs~Dg~v~~wd 226 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTAS---GDGTCALWDVESGQLLQSFHGH-GADVL----CLDLAPSETGNTFVSGGCDKKAMVWD 226 (354)
T ss_dssp SCEEEEEECSSSSEEEEEE---TTSEEEEEETTTCCEEEEEECC-SSCEE----EEEECCCSSCCEEEEEETTSCEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEe---CCCcEEEEeCCCCeEEEEEcCC-CCCeE----EEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 4678899998887877554 6688988988644333333333 33445 6666553 346666666678899988
Q ss_pred cCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeec--ccCceeEEEeccCCEEEEEeC
Q psy5768 117 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI--IMPIKDITLDLKFFSAFYRNL 194 (652)
Q Consensus 117 ~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~--~~~p~gl~lD~~~~~ly~~d~ 194 (652)
+........+..-......+++.|...+|.-.. ....|...++............ ......+++.+.+..|+....
T Consensus 227 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 227 MRSGQCVQAFETHESDVNSVRYYPSGDAFASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC
Confidence 865544444443345678899998554444333 2446666666544333222221 223456677666555554444
Q ss_pred C
Q psy5768 195 S 195 (652)
Q Consensus 195 ~ 195 (652)
+
T Consensus 305 d 305 (354)
T 2pbi_B 305 D 305 (354)
T ss_dssp T
T ss_pred C
Confidence 4
No 343
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=88.59 E-value=0.47 Score=41.38 Aligned_cols=31 Identities=19% Similarity=0.457 Sum_probs=20.2
Q ss_pred CCCCCCCCCCcc--ccccCCCCceeeeccCceee
Q psy5768 549 TPCRHLNGNCDD--ICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 549 ~~C~~~ng~Cs~--lCl~~~~~~~~C~Cp~g~~l 580 (652)
++|......|.+ .|+..++ +|+|.|+.||..
T Consensus 6 deC~~~~~~C~~~g~C~~~~g-~~~C~C~~Gy~G 38 (135)
T 2vj3_A 6 DECSLGANPCEHAGKCINTLG-SFECQCLQGYTG 38 (135)
T ss_dssp CTTTSSSCSSSTTCEEEECSS-SEEEECCTTEES
T ss_pred ccccCCCCCCCCCCEeECCCC-CEEEECCCCCcC
Confidence 444433334543 5776655 699999999975
No 344
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.50 E-value=3.2 Score=45.58 Aligned_cols=110 Identities=12% Similarity=0.069 Sum_probs=72.5
Q ss_pred cccceEEEEEEEcCCCeEEEeecc---------------------cccEEEEeccCCcc-------eEEe----------
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQ---------------------KGTINSVFFNGSNH-------RVLL---------- 352 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~---------------------~~~I~~~~~~g~~~-------~~i~---------- 352 (652)
..+..+.++.+++.+++||++-.. .+.|+++..++... +.++
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 346678999999999999998542 25688887553211 1111
Q ss_pred ------------eccCceeeeEEEccCCEEEEEeCC-----------CCeEEEEEcCCCCCccEEEEEeCCCCCceEEEE
Q psy5768 353 ------------ERQGSVEGLAYEYVHNYLYWTCNN-----------DATINKIDLDSPKAQRIVVVRLGQHDKPRGIDI 409 (652)
Q Consensus 353 ------------~~~~~~~glAvDw~~~~LYwtd~~-----------~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iav 409 (652)
..+..|.+|+||..++.+--+|.. ++.+.+..... +..+.++.........|+++
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~--g~~~rf~~~P~gaE~TG~~f 538 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT--GEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTT--CCEEEEEECCTTCEEEEEEE
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCC--CeEEEEEeCCCCccCcCeeE
Confidence 124579999999977644445643 23455554332 22445555556678889999
Q ss_pred eCCCCEEEEEecC
Q psy5768 410 DSCDSRIYWTNWN 422 (652)
Q Consensus 410 dp~~g~Lywtd~~ 422 (652)
.|....||+.-.+
T Consensus 539 spDg~tlfvniQH 551 (592)
T 3zwu_A 539 SPDQKTLFVGIQH 551 (592)
T ss_dssp CTTSSEEEEEEES
T ss_pred CCCCCEEEEEEEC
Confidence 9998899987654
No 345
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=88.43 E-value=0.35 Score=37.07 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=23.3
Q ss_pred CCCCCCCCCCc--cccccCCCCceeee-ccCceeeccC
Q psy5768 549 TPCRHLNGNCD--DICKLDETGQVVCS-CFTGKVLMED 583 (652)
Q Consensus 549 ~~C~~~ng~Cs--~lCl~~~~~~~~C~-Cp~g~~l~~d 583 (652)
++|......|. ..|+.+++ +|+|. |+.||.+..+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~G-sy~C~~~~~g~~~~~~ 40 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYG-GYLCLPRSAAVINDLH 40 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTC-CEEEEETTSCCCSCCS
T ss_pred ccccCCCCCCCCCCEeECCCC-CeEecccCCccccccc
Confidence 56665445674 47998877 69998 5567776655
No 346
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=88.41 E-value=32 Score=37.52 Aligned_cols=424 Identities=14% Similarity=0.080 Sum_probs=205.6
Q ss_pred CCCeEEEEecC-CCe--eEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCc---ceEEEEEcCCCccEEEEeCCC
Q psy5768 9 TQSKIVVCNLE-GEY--QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQV---VTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 9 ~~~~I~~~~~~-g~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~---~~I~~~~~dgs~~~~v~~~~~ 82 (652)
..+.|+++|+. ++. ..++... -..+.+|+|+|...+|.-+. ... ..|..++. |....++ ...
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~-------~~~v~~v~fs~dg~~l~~~~--~~~~~~~~v~~wd~-~~~~~~l-~gh- 146 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVF-------SGPVKDISWDSESKRIAAVG--EGRERFGHVFLFDT-GTSNGNL-TGQ- 146 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECS-------SSCEEEEEECTTSCEEEEEE--CCSSCSEEEEETTT-CCBCBCC-CCC-
T ss_pred CCCCEEEeECCCCcceeeEeeccc-------CCceEEEEECCCCCEEEEEE--CCCCceeEEEEeeC-CCCccee-cCC-
Confidence 45678888874 222 2333322 24789999999988887665 332 24544442 3322222 223
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
...+. .+++.+....+..+-+..+.|...+.........+.+-......+++.|. |.++.|-. ....|..-++.
T Consensus 147 ~~~v~----~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd-g~~las~s-~D~~i~lwd~~ 220 (611)
T 1nr0_A 147 ARAMN----SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD-GSLFASTG-GDGTIVLYNGV 220 (611)
T ss_dssp SSCEE----EEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT-SSEEEEEE-TTSCEEEEETT
T ss_pred CCCce----EEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCC-CCEEEEEE-CCCcEEEEECC
Confidence 34566 77777655555566666777887776543333333333356789999984 55555432 24456655543
Q ss_pred -CCCcEEEEe------ecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeeccCC
Q psy5768 163 -GKKQTILAQ------EIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQT 235 (652)
Q Consensus 163 -g~~~~~~~~------~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~q~ 235 (652)
|.....+.. .--....++++.+.+.+|.-...| +..+.--.. .... ++.+..
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-~~v~lWd~~---~~~~-------------~~~~~~---- 279 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-KTIKIWNVA---TLKV-------------EKTIPV---- 279 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-SEEEEEETT---TTEE-------------EEEEEC----
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-CeEEEEeCC---CCce-------------eeeecC----
Confidence 332222211 112356778887776666655555 222221100 0000 000000
Q ss_pred CCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEeeecceeEEecCCCCCCCCCceeeeeccccce
Q psy5768 236 GTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKN 315 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~ 315 (652)
.... .. ........+ ..++..+....++..++..+ . +...+ ..+...
T Consensus 280 --~~~~------~~-------~~~~~~~~~------------~~l~s~s~d~~i~~~~~~~~-~---~~~~~--~gh~~~ 326 (611)
T 1nr0_A 280 --GTRI------ED-------QQLGIIWTK------------QALVSISANGFINFVNPELG-S---IDQVR--YGHNKA 326 (611)
T ss_dssp --CSSG------GG-------CEEEEEECS------------SCEEEEETTCCEEEEETTTT-E---EEEEE--CCCSSC
T ss_pred --CCCc------cc-------eeEEEEEcC------------CEEEEEeCCCcEEEEeCCCC-C---cceEE--cCCCCC
Confidence 0000 00 000000011 11111222233443343111 0 11111 122345
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe--eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc--
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL--ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ-- 391 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~--~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~-- 391 (652)
+.+++|.+..+.|+-+. ..+.|...++.......+. .....+.++++.. .+.|+ +-+..+.+...++.+....
T Consensus 327 v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~-~~~l~-s~s~d~~v~~w~~~~~~~~~~ 403 (611)
T 1nr0_A 327 ITALSSSADGKTLFSAD-AEGHINSWDISTGISNRVFPDVHATMITGIKTTS-KGDLF-TVSWDDHLKVVPAGGSGVDSS 403 (611)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT-TSCEE-EEETTTEEEEECSSSSSSCTT
T ss_pred EEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceeeecccCCcceEEEEEECC-CCcEE-EEEcCCceEEeecCCcccccc
Confidence 78899988766665544 4577887777654332222 1223566777763 33443 4445566776665442111
Q ss_pred cEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeE
Q psy5768 392 RIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKI 471 (652)
Q Consensus 392 ~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 471 (652)
...... ....|.++++.|....++.+... .|.... .|. ...+ . .-..+..+++.++++.|.-+. ..+.|
T Consensus 404 ~~~~~~--~~~~~~~~~~s~dg~~~~~~~~~----~v~~~~-~~~-~~~~-~-~~~~v~~va~spdg~~lasgs-~D~~v 472 (611)
T 1nr0_A 404 KAVANK--LSSQPLGLAVSADGDIAVAACYK----HIAIYS-HGK-LTEV-P-ISYNSSCVALSNDKQFVAVGG-QDSKV 472 (611)
T ss_dssp SCCEEE--CSSCEEEEEECTTSSCEEEEESS----EEEEEE-TTE-EEEE-E-CSSCEEEEEECTTSCEEEEEE-TTSEE
T ss_pred ceeeee--cCCCCcEEEEeCCCcEEEEEeCc----eEEEEe-CCc-eeee-e-cCCCceEEEEeCCCCEEEEeC-CCCeE
Confidence 011111 23578899999866566666322 332222 332 1121 1 123567899998877776654 45678
Q ss_pred EEEecCCCceEEEec-CCCCceeEEEEe--CCEEEEEcCCCCeEEEEEccC
Q psy5768 472 ERCDYDGTNRIVLSK-ISPLHPFDMAVY--GEFIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 472 ~~~~ldG~~~~~l~~-~~~~~p~glav~--~~~lYwtd~~~~~I~~~~k~~ 519 (652)
...++++.....+.. .......+|++. +.+|.-.. ..+.|..-+..+
T Consensus 473 ~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s-~d~~v~~w~~~~ 522 (611)
T 1nr0_A 473 HVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD-QSRKVIPYSVAN 522 (611)
T ss_dssp EEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSCEEEEEGGG
T ss_pred EEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEc-CCCCEEEEEcCC
Confidence 777877654322211 122345677775 33444333 444555444433
No 347
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=88.37 E-value=31 Score=39.93 Aligned_cols=167 Identities=8% Similarity=-0.075 Sum_probs=98.4
Q ss_pred CCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc-cEEEEeCCCcCCc
Q psy5768 8 PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK-RETVVSQKKYPAV 86 (652)
Q Consensus 8 ~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~-~~~v~~~~~~~~p 86 (652)
...+.|++++..+........ .-..+.+|+|.+ +.+|.-.. ..+.|..+++.... ...+ . . -..+
T Consensus 36 s~Dg~I~lw~~~~~~~~~~~~-------~~~~V~~l~fsp-g~~L~S~s---~D~~v~lWd~~~~~~~~~~-~-~-~~~V 101 (902)
T 2oaj_A 36 TVTGEVHIYGQQQVEVVIKLE-------DRSAIKEMRFVK-GIYLVVIN---AKDTVYVLSLYSQKVLTTV-F-V-PGKI 101 (902)
T ss_dssp ETTSEEEEECSTTCEEEEECS-------SCCCEEEEEEET-TTEEEEEE---TTCEEEEEETTTCSEEEEE-E-C-SSCE
T ss_pred eCCCEEEEEeCCCcEEEEEcC-------CCCCEEEEEEcC-CCEEEEEE---CcCeEEEEECCCCcEEEEE-c-C-CCCE
Confidence 345788888887755433332 124789999999 56566554 56889999987543 3333 2 2 2456
Q ss_pred cCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEE-----------eCCCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5768 87 TACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLI-----------SGGVDQPSALAVDPESGYLFWSESGKIPL 155 (652)
Q Consensus 87 ~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~-----------~~~~~~P~~iavd~~~g~lywtd~~~~~~ 155 (652)
. .++++...+.|+... ..+.|.+.++++....... ..-......++.+|..+.++.+-. ....
T Consensus 102 ~----~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~-~dg~ 175 (902)
T 2oaj_A 102 T----SIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY-EYVT 175 (902)
T ss_dssp E----EEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC-SSCE
T ss_pred E----EEEECCCCCEEEEEc-CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe-CCCc
Confidence 6 888887666666655 5778888898765432111 112245678999986544444432 2445
Q ss_pred EEEEeCCCCCcEEEEeec------------------ccCceeEEEeccCCEEEEEeCC
Q psy5768 156 IARAGLDGKKQTILAQEI------------------IMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 156 I~~~~ldg~~~~~~~~~~------------------~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
| .-++........+... -...+.+++.+.+.+|.-...|
T Consensus 176 v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 176 L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 6 5565543322211110 1345777887776666555555
No 348
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=88.27 E-value=0.28 Score=32.49 Aligned_cols=31 Identities=35% Similarity=0.656 Sum_probs=20.5
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCceeeeccCceee
Q psy5768 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l 580 (652)
..+..+||.. +| .|+..+. +|+|.||.||..
T Consensus 4 d~C~~~pC~n-gg----~C~~~~~-~~~C~C~~G~~G 34 (39)
T 1edm_B 4 DQCESNPCLN-GG----SCKDDIN-SYECWCPFGFEG 34 (39)
T ss_dssp CTTTTCCCCT-TC----EEEEETT-EEEEECCTTCCS
T ss_pred ccCCCCCCCC-CC----EeEcCCC-ceEeECCCCCcC
Confidence 4556678863 23 3444444 799999999864
No 349
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.00 E-value=34 Score=37.29 Aligned_cols=76 Identities=12% Similarity=0.278 Sum_probs=48.4
Q ss_pred ceEEEecCCCEEEEEeC------------------------------------CCCeEEEEecC-CCceEEEecCCCCce
Q psy5768 450 NALALDHQAEKLFWGDA------------------------------------RLDKIERCDYD-GTNRIVLSKISPLHP 492 (652)
Q Consensus 450 ~glaiD~~~~~LYw~D~------------------------------------~~~~I~~~~ld-G~~~~~l~~~~~~~p 492 (652)
.++++|+.+++||+... ..+.|..+|+. |..+-.+-.. ..+
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~--~~~ 466 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK--FAA 466 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES--SCC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC--CCc
Confidence 46899999999998642 23567777765 4333332221 112
Q ss_pred eE--EEEeCCEEEEEcCCCCeEEEEEccCCceEEEEec
Q psy5768 493 FD--MAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 493 ~g--lav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~ 528 (652)
.+ ++..++.||... ..+.|+.++..+|+.+-.+..
T Consensus 467 ~~~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 467 WGGTLYTKGGLVWYAT-LDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CSBCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEEC
T ss_pred cceeEEECCCEEEEEc-CCCeEEEEECCCCCEEEEEeC
Confidence 22 344578888864 567899999989987665553
No 350
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.95 E-value=20 Score=34.69 Aligned_cols=162 Identities=9% Similarity=0.041 Sum_probs=84.9
Q ss_pred cceEEEEEEEcC-CCeEEEeecccccEEEEeccCCcc-------e--EEe-eccCceeeeEEEcc--CCEEEEEeCCCCe
Q psy5768 313 MKNIIELSYDYK-RKTLFYSDIQKGTINSVFFNGSNH-------R--VLL-ERQGSVEGLAYEYV--HNYLYWTCNNDAT 379 (652)
Q Consensus 313 ~~~~~~v~~D~~-~~~lywsd~~~~~I~~~~~~g~~~-------~--~i~-~~~~~~~glAvDw~--~~~LYwtd~~~~~ 379 (652)
...+.+++|.+. ++.++.+-...+.|...+++.... + ..+ .....+.+|++.+. ++.|+.+ ...+.
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~ 135 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL-GNDGI 135 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTCE
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe-cCCCc
Confidence 355788999885 345555555567788777765321 1 112 33456888999887 6555544 45678
Q ss_pred EEEEEcCCCCCcc--E--EEEEe------CCCCCceEEEEeCC---CCEEEEEecCCCCCceEEEeecCCCceEEEEc--
Q psy5768 380 INKIDLDSPKAQR--I--VVVRL------GQHDKPRGIDIDSC---DSRIYWTNWNSHLPSIQRAFFSGFGTESIITT-- 444 (652)
Q Consensus 380 I~~~~~~~~~~~~--~--~~~~~------~~~~~P~~Iavdp~---~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~-- 444 (652)
|.+.++....... . ..... ........++.+|. ..+|..+... ..+............+...
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 212 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE---QAIIYQRGKDGKLHVAAKLPG 212 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT---EEEEEEECTTSCEEEEEECCC
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC---CcEEEEccCCCceeeeeecCC
Confidence 8888875433110 0 00110 23345677888885 4444444332 1332222222222112211
Q ss_pred CCCCCceEEEecCCC---EEEEEeCCCCeEEEEecCC
Q psy5768 445 DITMPNALALDHQAE---KLFWGDARLDKIERCDYDG 478 (652)
Q Consensus 445 ~l~~P~glaiD~~~~---~LYw~D~~~~~I~~~~ldG 478 (652)
.-.....+++.+.+. +++.+-...+.|...++..
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 122456788887762 4444444455666666654
No 351
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.83 E-value=35 Score=37.24 Aligned_cols=409 Identities=9% Similarity=-0.015 Sum_probs=190.2
Q ss_pred EEecCCCCeEEEEecCCC-eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcC-CCccEEEEe--
Q psy5768 4 AVSSPTQSKIVVCNLEGE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD-GTKRETVVS-- 79 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~d-gs~~~~v~~-- 79 (652)
+++....+.|.+++.... ...++.. .-..+.+|+|+|....|.-. ...+.|..+++. |.....+..
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~~-------H~~~V~~v~fspdg~~las~---s~D~~i~lwd~~~g~~~~~~~~~~ 232 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFGE-------HTKFVHSVRYNPDGSLFAST---GGDGTIVLYNGVDGTKTGVFEDDS 232 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEECC-------CSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTTCCEEEECBCTT
T ss_pred EEEEeCCCeEEEEECCCCeEeeeecc-------ccCceEEEEECCCCCEEEEE---ECCCcEEEEECCCCcEeeeecccc
Confidence 445555677888886543 3333432 23578999999976655544 367888888864 443333212
Q ss_pred ----CCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCc-EEEEEeCCC--CCceeEEEcCCCCeEEEEecCC
Q psy5768 80 ----QKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQY-RYVLISGGV--DQPSALAVDPESGYLFWSESGK 152 (652)
Q Consensus 80 ----~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~-~~~l~~~~~--~~P~~iavd~~~g~lywtd~~~ 152 (652)
.. ...+. ++++...++ +..+-+..+.|.+-++.... ...+..... .....++.+ ...|.-.. .
T Consensus 233 ~~~~~h-~~~V~----~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~s~s--~ 302 (611)
T 1nr0_A 233 LKNVAH-SGSVF----GLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT--KQALVSIS--A 302 (611)
T ss_dssp SSSCSS-SSCEE----EEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC--SSCEEEEE--T
T ss_pred cccccc-CCCEE----EEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEc--CCEEEEEe--C
Confidence 12 33455 777776444 44555567788888876433 333221110 111222222 22222221 1
Q ss_pred CCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCCcceeeeeeec
Q psy5768 153 IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKD 232 (652)
Q Consensus 153 ~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~ 232 (652)
...|...++...........--.....+++.+.+++|+-...|| ..+.--...+ . . ..++.
T Consensus 303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~-~v~~Wd~~~~--~-~-------------~~~~~-- 363 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG-HINSWDISTG--I-S-------------NRVFP-- 363 (611)
T ss_dssp TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTC--C-E-------------EECSS--
T ss_pred CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC-cEEEEECCCC--c-e-------------eeecc--
Confidence 23344434332222111111134567888888777777676663 3222111000 0 0 00000
Q ss_pred cCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEE-eeecceeEEecCCCCCCC-CCceeeeec
Q psy5768 233 AQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMY-SRVNRIDSIHMTDKSDLN-SPFESIRNS 310 (652)
Q Consensus 233 ~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~-s~~~~i~~i~l~~~~~~~-~p~~~~~~~ 310 (652)
.+ | ...-.+.... +...|+. +....++..++. ..... ........
T Consensus 364 -----------~~---h-----~~~v~~~~~s------------~~~~l~s~s~d~~v~~w~~~-~~~~~~~~~~~~~~- 410 (611)
T 1nr0_A 364 -----------DV---H-----ATMITGIKTT------------SKGDLFTVSWDDHLKVVPAG-GSGVDSSKAVANKL- 410 (611)
T ss_dssp -----------CS---C-----SSCEEEEEEC------------TTSCEEEEETTTEEEEECSS-SSSSCTTSCCEEEC-
T ss_pred -----------cC---C-----cceEEEEEEC------------CCCcEEEEEcCCceEEeecC-Cccccccceeeeec-
Confidence 00 0 0000000000 0011111 222333333331 11110 00000111
Q ss_pred cccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 311 TMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 311 ~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
...+.++++.+....++.+.. +.|...+ .+. ...+ .....+..+|+.+.++.|.-. +..++|...++.+..
T Consensus 411 --~~~~~~~~~s~dg~~~~~~~~--~~v~~~~-~~~-~~~~-~~~~~v~~va~spdg~~lasg-s~D~~v~lwd~~~~~- 481 (611)
T 1nr0_A 411 --SSQPLGLAVSADGDIAVAACY--KHIAIYS-HGK-LTEV-PISYNSSCVALSNDKQFVAVG-GQDSKVHVYKLSGAS- 481 (611)
T ss_dssp --SSCEEEEEECTTSSCEEEEES--SEEEEEE-TTE-EEEE-ECSSCEEEEEECTTSCEEEEE-ETTSEEEEEEEETTE-
T ss_pred --CCCCcEEEEeCCCcEEEEEeC--ceEEEEe-CCc-eeee-ecCCCceEEEEeCCCCEEEEe-CCCCeEEEEEccCCc-
Confidence 123456677666555655532 2333333 222 1222 223357889999887766544 556788887775421
Q ss_pred ccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecC--CCceE-EEEcCCCCCceEEEecCCCEEEEEeCC
Q psy5768 391 QRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSG--FGTES-IITTDITMPNALALDHQAEKLFWGDAR 467 (652)
Q Consensus 391 ~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG--~~~~~-l~~~~l~~P~glaiD~~~~~LYw~D~~ 467 (652)
...+..........+|++.|...+|.-+.... .|....+.. ..... +....-.....+++.+++++|.-+. .
T Consensus 482 -~~~~~~~~h~~~v~~v~fspdg~~las~s~d~---~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs-~ 556 (611)
T 1nr0_A 482 -VSEVKTIVHPAEITSVAFSNNGAFLVATDQSR---KVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS-L 556 (611)
T ss_dssp -EEEEEEEECSSCEEEEEECTTSSEEEEEETTS---CEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEE-T
T ss_pred -eeeeeccCCCCceEEEEECCCCCEEEEEcCCC---CEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEE-C
Confidence 11112223446788999999877776665442 444444442 11111 1110123456899998887776654 3
Q ss_pred CCeEEEEecCCCc-eE-EEecCC-CCceeEEEEe
Q psy5768 468 LDKIERCDYDGTN-RI-VLSKIS-PLHPFDMAVY 498 (652)
Q Consensus 468 ~~~I~~~~ldG~~-~~-~l~~~~-~~~p~glav~ 498 (652)
.+.|...+++... .. .+.... .....++++.
T Consensus 557 D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs 590 (611)
T 1nr0_A 557 DNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 590 (611)
T ss_dssp TSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEE
T ss_pred CCcEEEEECCCcccccchhhccCcccCeeEEEEc
Confidence 4567777777543 22 232222 2334556554
No 352
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=87.57 E-value=0.29 Score=35.10 Aligned_cols=23 Identities=30% Similarity=0.756 Sum_probs=17.6
Q ss_pred cce--ecCCCceEEEeCCccccCCCccc
Q psy5768 250 LCL--YNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~--~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
.|+ ....+|+|.|+.|| .|..|.
T Consensus 19 ~C~~~~~~~~~~C~C~~G~---~G~~Ce 43 (53)
T 1egf_A 19 VCMHIESLDSYTCNCVIGY---SGDRCQ 43 (53)
T ss_dssp EEEEESSSSCEEEECCTTC---CSSSSC
T ss_pred EEEeeCCCCCEEEECCCCC---cCCcCC
Confidence 577 45558999999998 466776
No 353
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=87.39 E-value=24 Score=34.96 Aligned_cols=146 Identities=8% Similarity=-0.025 Sum_probs=84.6
Q ss_pred CCeeEEEEEC--CCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEE
Q psy5768 38 SKISSIAVWP--VKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVA 115 (652)
Q Consensus 38 ~~~~~v~~d~--~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~ 115 (652)
..+..+++++ .++.+.-.. ..+.|..+++.......+........+. .+++.. .+++..+-...+.|.+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s---~dg~i~~wd~~~~~~~~~~~~~~~~~i~----~~~~~p-dg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWAD---NRGTIGFQSYEDDSQYIVHSAKSDVEYS----SGVLHK-DSLLLALYSPDGILDVY 197 (343)
T ss_dssp SCEEEEECCC---CCEEEEEE---TTCCEEEEESSSSCEEEEECCCSSCCCC----EEEECT-TSCEEEEECTTSCEEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEe---CCCcEEEEECCCCcEEEEEecCCCCceE----EEEECC-CCCEEEEEcCCCEEEEE
Confidence 4689999998 766666554 5688988988755433333222122466 888876 45566665678899999
Q ss_pred EcCCCcEE-EEEeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEee---cccCc--eeEEEeccCCE
Q psy5768 116 RLTGQYRY-VLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE---IIMPI--KDITLDLKFFS 188 (652)
Q Consensus 116 ~~dg~~~~-~l~~~-~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~---~~~~p--~gl~lD~~~~~ 188 (652)
++...... ..+.. -......+++.|...+|.-+.. . .|..-++........+.. ..... ..+++++.+..
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~--~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD--Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES--S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC--C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 98755432 22332 2356789999996555555542 2 677767654332111110 00111 34788877666
Q ss_pred EEEEeC
Q psy5768 189 AFYRNL 194 (652)
Q Consensus 189 ly~~d~ 194 (652)
|.....
T Consensus 275 l~~~s~ 280 (343)
T 3lrv_A 275 MIAYSN 280 (343)
T ss_dssp EEEEET
T ss_pred EEEecC
Confidence 655444
No 354
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=87.33 E-value=25 Score=35.03 Aligned_cols=141 Identities=14% Similarity=0.101 Sum_probs=77.4
Q ss_pred CCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCcc-EE--EEeCCCcCC
Q psy5768 9 TQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR-ET--VVSQKKYPA 85 (652)
Q Consensus 9 ~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~-~~--v~~~~~~~~ 85 (652)
..+.|.+++.+......+....+ .-..+.+|+++|..+.|.-.. ..+.|..++++.... +. .+... ...
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~----h~~~v~~v~~sp~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~~~~h-~~~ 152 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEG----HENEVKSVAWAPSGNLLATCS---RDKSVWVWEVDEEDEYECVSVLNSH-TQD 152 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECC----CSSCEEEEEECTTSSEEEEEE---TTSCEEEEEECTTSCEEEEEEECCC-CSC
T ss_pred CCCcEEEEEccCCCeEEEEEccC----CCCCceEEEEeCCCCEEEEEE---CCCeEEEEECCCCCCeEEEEEecCc-CCC
Confidence 44556666665432222211111 235789999999877776554 567888888765432 22 22333 344
Q ss_pred ccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcE--EEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 86 VTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYR--YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 86 p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~--~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
+. .+++....+ +..+-+..+.|.+.+...... ...+.+-......++++|...+|.-......-+|+.....
T Consensus 153 v~----~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 153 VK----HVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp EE----EEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECT
T ss_pred eE----EEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccC
Confidence 56 777766444 444444566777777654422 2223333456789999996555554443323345554443
No 355
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=87.07 E-value=0.17 Score=44.67 Aligned_cols=42 Identities=17% Similarity=0.362 Sum_probs=32.2
Q ss_pred CCCCCCCCCCCCc--ccceecCCCceEEEeCCc-cccCCCccccc
Q psy5768 236 GTNPCGVNNGGCA--ELCLYNGVSAVCACAHGV-VAQDGKSCSEY 277 (652)
Q Consensus 236 ~~n~C~~~ng~Cs--~lC~~~~~~~~C~C~~G~-l~~dg~~C~~~ 277 (652)
++++|......|. +.|+..+++|+|.|+.|| +..+++.|...
T Consensus 95 dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 95 DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTT
T ss_pred CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccC
Confidence 4677776556776 689988889999999998 44577888643
No 356
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=86.90 E-value=0.39 Score=48.60 Aligned_cols=39 Identities=26% Similarity=0.578 Sum_probs=21.1
Q ss_pred CCCCCC-CCCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 549 TPCRHL-NGNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 549 ~~C~~~-ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
++|... ++.|.+.|+..++ +|+|.|+.||.+..+ ++|.+
T Consensus 44 ~eC~~~~~~~C~~~C~~~~g-~~~C~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 44 NECHPERTDGCQHFCLPGQE-SYTCSCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp SSCCTTCTTSCSSEEECCSS-SCEEECCTTEECCTTSSCCEE
T ss_pred ccCCCCCCCCCcCccccCCC-eeEEecccccccccccccccc
Confidence 455431 2456566665444 466666666666555 55554
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=86.62 E-value=5.2 Score=43.93 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=71.2
Q ss_pred CCCCeeEEEEECCCCEEEEEeccCC-------------------cceEEEEEcCCCc-------cEEEEeCC--------
Q psy5768 36 TLSKISSIAVWPVKGKMFWSNVTKQ-------------------VVTIEMAFMDGTK-------RETVVSQK-------- 81 (652)
Q Consensus 36 ~~~~~~~v~~d~~~~~lyw~d~~~~-------------------~~~I~~~~~dgs~-------~~~v~~~~-------- 81 (652)
.+.++.++.++|.+++||++-.+.. .+.|+|+..++.. .+.++..+
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 5789999999999999999862111 2579999876431 22333211
Q ss_pred ------------CcCCccCCCCcEEEEccCCcEEE-EeCC-----------CCEEEEEEcC-CCcEEEEEeCCCCCceeE
Q psy5768 82 ------------KYPAVTACNLHIAVDWIAQNIYW-SDPK-----------ENVIEVARLT-GQYRYVLISGGVDQPSAL 136 (652)
Q Consensus 82 ------------~~~~p~~~~~~lavDw~~~~lY~-~d~~-----------~~~I~v~~~d-g~~~~~l~~~~~~~P~~i 136 (652)
.+..|. .|+||.. ++|++ +|.. .+.+.+.+.+ |+.++.+....-....++
T Consensus 462 ~~~~~~~~~~~~~f~~PD----NL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~ 536 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPD----GLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp GGGCCTTCCTTTCCCCEE----EEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEE
T ss_pred ccccccccCCCCCccCCc----ceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCe
Confidence 155688 9999985 45665 5542 3456666665 555554443333567788
Q ss_pred EEcCCCCeEEEEe
Q psy5768 137 AVDPESGYLFWSE 149 (652)
Q Consensus 137 avd~~~g~lywtd 149 (652)
++.|....||+.=
T Consensus 537 ~fspDg~tlfvni 549 (592)
T 3zwu_A 537 SFSPDQKTLFVGI 549 (592)
T ss_dssp EECTTSSEEEEEE
T ss_pred eECCCCCEEEEEE
Confidence 8888777888764
No 358
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.51 E-value=26 Score=34.38 Aligned_cols=117 Identities=8% Similarity=0.095 Sum_probs=65.5
Q ss_pred eEEEEEEEc---CCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEc---cCCEEEEEeCCCCeEEEEEcCCC
Q psy5768 315 NIIELSYDY---KRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEY---VHNYLYWTCNNDATINKIDLDSP 388 (652)
Q Consensus 315 ~~~~v~~D~---~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw---~~~~LYwtd~~~~~I~~~~~~~~ 388 (652)
.+.++++.. ..+.++++-...+.|...++..............+..+++++ .++.|+. -...+.|.+.++...
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA-TSLEGKFHVFDMRTQ 244 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE-EESTTEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE-ECCCCeEEEEeCcCC
Confidence 455666432 234444554456788888877654433334445788889888 5555554 456688888776542
Q ss_pred CCccEE-E-EEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeec
Q psy5768 389 KAQRIV-V-VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFS 434 (652)
Q Consensus 389 ~~~~~~-~-~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ld 434 (652)
...... . ..........+++++|....++++-.... .|...++.
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~ 290 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG--GLHLWKYE 290 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS--EEEEEEEE
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC--cEEEeecC
Confidence 211111 1 11134567788999996664555544332 44444443
No 359
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.15 E-value=30 Score=34.85 Aligned_cols=195 Identities=6% Similarity=0.022 Sum_probs=109.7
Q ss_pred EEEEEEEcCCCeEEEeec-ccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEE
Q psy5768 316 IIELSYDYKRKTLFYSDI-QKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIV 394 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~-~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~ 394 (652)
+..++|.+..+.|..+.. ..+.|...++........+..-..+.+|++.+.++.|..+. .+.+.++..... ...
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~---~~~ 210 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTG---SCI 210 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTC---CEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc--ceeEEEEEeccC---cce
Confidence 446778777777766543 34667777766543333334445688999999888776553 345666665432 122
Q ss_pred EEEe--CCCCCceEEEEeCCCCEEEEEecCCCC-CceEEEeecCCCceEEE----EcCCCCCceEEEecCCCEEEEEeCC
Q psy5768 395 VVRL--GQHDKPRGIDIDSCDSRIYWTNWNSHL-PSIQRAFFSGFGTESII----TTDITMPNALALDHQAEKLFWGDAR 467 (652)
Q Consensus 395 ~~~~--~~~~~P~~Iavdp~~g~Lywtd~~~~~-~~I~r~~ldG~~~~~l~----~~~l~~P~glaiD~~~~~LYw~D~~ 467 (652)
.... ......+++++.|...+|..+...... ..|....+.......+. .........|++.++++.|..+. .
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs-~ 289 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS-N 289 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE-T
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc-C
Confidence 1111 122346789999976666655433221 13444444433322221 12233457889998887776654 3
Q ss_pred CCeEEEEecCCCc-eEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEEEEE
Q psy5768 468 LDKIERCDYDGTN-RIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVLRAN 516 (652)
Q Consensus 468 ~~~I~~~~ldG~~-~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~~~~ 516 (652)
.+.|...|+.... .+.+.........+|++- ++.+..|-...++|...+
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4578888886443 334444333456788876 345555555566655444
No 360
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.26 E-value=30 Score=33.96 Aligned_cols=117 Identities=6% Similarity=-0.012 Sum_probs=73.5
Q ss_pred CCCeeEEEEECCC--CEEEEEeccCCcceEEEEEcCC--CccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEE
Q psy5768 37 LSKISSIAVWPVK--GKMFWSNVTKQVVTIEMAFMDG--TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVI 112 (652)
Q Consensus 37 ~~~~~~v~~d~~~--~~lyw~d~~~~~~~I~~~~~dg--s~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I 112 (652)
-..+..|++++.. +.++++- ...+.|+.++++. ......+... ...+. .+++....+.|+ +-+..+.|
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~----~~~~~~~~~~l~-s~~~dg~v 110 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAG--SWANDVRCWEVQDSGQTIPKAQQMH-TGPVL----DVCWSDDGSKVF-TASCDKTA 110 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEE--ETTSEEEEEEECTTSCEEEEEEEEC-SSCEE----EEEECTTSSEEE-EEETTSEE
T ss_pred CCceEEEEEcCCCCCceEEEEE--CCCCcEEEEEcCCCCceeEEEeccc-cCCEE----EEEECcCCCEEE-EEcCCCcE
Confidence 3688999999986 4544444 3567888888874 3332344444 45577 888877444454 44467889
Q ss_pred EEEEcCCCcEEEEEeCCCCCceeEEE--cCCCCeEEEEecCCCCeEEEEeCCCC
Q psy5768 113 EVARLTGQYRYVLISGGVDQPSALAV--DPESGYLFWSESGKIPLIARAGLDGK 164 (652)
Q Consensus 113 ~v~~~dg~~~~~l~~~~~~~P~~iav--d~~~g~lywtd~~~~~~I~~~~ldg~ 164 (652)
.+.+++......+.. .......+++ +| +|.++.+-. ....|...++...
T Consensus 111 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~~~l~~~~-~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 111 KMWDLSSNQAIQIAQ-HDAPVKTIHWIKAP-NYSCVMTGS-WDKTLKFWDTRSS 161 (368)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEEEECS-SCEEEEEEE-TTSEEEEECSSCS
T ss_pred EEEEcCCCCceeecc-ccCceEEEEEEeCC-CCCEEEEcc-CCCcEEEEECCCC
Confidence 999988765554443 2356788888 66 444444432 2456777776543
No 361
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=84.98 E-value=0.75 Score=31.55 Aligned_cols=27 Identities=19% Similarity=0.439 Sum_probs=16.8
Q ss_pred CCCCCCCCCccccccCCCCceeeeccCceee
Q psy5768 550 PCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 550 ~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l 580 (652)
||.. .|.|.. ....++|+|.||.||..
T Consensus 10 pC~n-gg~C~~---~~~~~~~~C~C~~G~~G 36 (45)
T 1a3p_A 10 YCLN-GGVXMH---IESLDSYTCNCVIGYSG 36 (45)
T ss_dssp CCSS-SCEEEE---CTTTSSEEEECCTTEET
T ss_pred CCCC-CCEEEe---ecCCCCEEEEcCCCCcC
Confidence 8873 233431 12334799999999964
No 362
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=84.86 E-value=0.33 Score=41.38 Aligned_cols=22 Identities=32% Similarity=0.736 Sum_probs=10.1
Q ss_pred CCccccccCCCCceeeeccCceee
Q psy5768 557 NCDDICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 557 ~Cs~lCl~~~~~~~~C~Cp~g~~l 580 (652)
.|.+.|+. . ++|+|.|+.||.+
T Consensus 50 ~C~~~C~~-~-~~y~C~C~~Gy~~ 71 (118)
T 1dx5_I 50 ACPADCDP-N-TQASCECPEGYIL 71 (118)
T ss_dssp EEECEECT-T-STTCEECCTTEEE
T ss_pred CCCCcccC-C-CCeEeECCCCccC
Confidence 34444443 1 2455555555554
No 363
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=84.64 E-value=0.55 Score=33.96 Aligned_cols=40 Identities=20% Similarity=0.320 Sum_probs=24.8
Q ss_pred CCCCCCCCCCCCCCCcccc-ccCCCCceeeeccCceeeccCCcccC
Q psy5768 544 DACAKTPCRHLNGNCDDIC-KLDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lC-l~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
..+..+||.. .|.|..+= +... +.|+|.||.||.. .+|..
T Consensus 9 ~eC~s~pC~N-gGtC~~~~~~d~~-~~y~C~C~~g~~G---~~CE~ 49 (55)
T 3u7u_G 9 AEKEKTFCVN-GGECFMVKDLSNP-SRYLCKCPNEFTG---DRCQN 49 (55)
T ss_dssp CSTTTTTSCT-TCEEEEECCC--C-CCEEEEECTTEES---TTSCE
T ss_pred CCCcCCCCCC-CCCcCCCCccCCC-CCEeEeCCCCCcC---CCcCc
Confidence 5677899973 34464321 2222 3799999999965 45653
No 364
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=84.46 E-value=0.53 Score=34.01 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=21.6
Q ss_pred CCCCCCCCCCCCcccc-eecCCCceEEEeCCccccCCCccc
Q psy5768 236 GTNPCGVNNGGCAELC-LYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 236 ~~n~C~~~ng~Cs~lC-~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
..+||.. .|.|..+= +....+|+|.|+.|| .|+.|.
T Consensus 12 ~s~pC~N-gGtC~~~~~~d~~~~y~C~C~~g~---~G~~CE 48 (55)
T 3u7u_G 12 EKTFCVN-GGECFMVKDLSNPSRYLCKCPNEF---TGDRCQ 48 (55)
T ss_dssp TTTTSCT-TCEEEEECCC--CCCEEEEECTTE---ESTTSC
T ss_pred cCCCCCC-CCCcCCCCccCCCCCEeEeCCCCC---cCCCcC
Confidence 4566652 35554321 233458999999998 466775
No 365
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=84.26 E-value=40 Score=34.63 Aligned_cols=194 Identities=13% Similarity=0.071 Sum_probs=106.8
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccE
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRI 393 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~ 393 (652)
.+.++++| +..+++-...+.|...++........+ .....+..|++ .+ ++.++-+..+.|.+.++....
T Consensus 135 ~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~~~---- 204 (435)
T 1p22_A 135 GVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNTGE---- 204 (435)
T ss_dssp CEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSSCC----
T ss_pred cEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCCCc----
Confidence 35666664 444555455677888877644333333 23335555555 34 455566667889988876432
Q ss_pred EEEEe-CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEE---EEcCCCCCceEEEecCCCEEEEEeCCCC
Q psy5768 394 VVVRL-GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESI---ITTDITMPNALALDHQAEKLFWGDARLD 469 (652)
Q Consensus 394 ~~~~~-~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l---~~~~l~~P~glaiD~~~~~LYw~D~~~~ 469 (652)
.+... .......+++.++ ++|+..... +.|...++.......+ ....-.....+++| ++.|+.+. ..+
T Consensus 205 ~~~~~~~h~~~v~~l~~~~--~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~-~dg 276 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNN--GMMVTCSKD---RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS-GDR 276 (435)
T ss_dssp EEEEECCCCSCEEEEECCT--TEEEEEETT---SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEE-TTS
T ss_pred EEEEEcCCCCcEEEEEEcC--CEEEEeeCC---CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEEe-CCC
Confidence 22222 2334556677764 455544432 2566556654433221 11122234566664 66666654 456
Q ss_pred eEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 470 KIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 470 ~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.|...++........+.........+++.+++|+... ..+.|...+..+|+....+.
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLE 333 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEE-TTSCEEEEETTTCCEEEEEC
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEe-CCCeEEEEECCCCCEEEEEe
Confidence 7888888765544444433345566777666555544 55667777777776655554
No 366
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=84.17 E-value=0.65 Score=32.16 Aligned_cols=23 Identities=30% Similarity=0.787 Sum_probs=16.1
Q ss_pred cceecC--CCceEEEeCCccccCCCccc
Q psy5768 250 LCLYNG--VSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~~~~--~~~~C~C~~G~l~~dg~~C~ 275 (652)
.|.... ++|+|.|+.|| .|..|.
T Consensus 18 ~C~~~~~~~~~~C~C~~Gy---tG~~Ce 42 (46)
T 1k36_A 18 QCIYLVDMSQNYCRCEVGY---TGVRCE 42 (46)
T ss_dssp EEEEETTTTEEEEEECTTC---SSTTSC
T ss_pred EeeccCCCCCEEEECCCCC---ccCCCC
Confidence 455432 47999999999 466665
No 367
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=84.11 E-value=34 Score=33.59 Aligned_cols=155 Identities=10% Similarity=0.031 Sum_probs=90.1
Q ss_pred cceEEEEEEEcCC--CeEEEeecccccEEEEeccCCcce--EEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 313 MKNIIELSYDYKR--KTLFYSDIQKGTINSVFFNGSNHR--VLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 313 ~~~~~~v~~D~~~--~~lywsd~~~~~I~~~~~~g~~~~--~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
-..+.+++|.+.. +.++++-...+.|...+++..... ..+ .....+..|++.+.++.|+.+ ...+.|.+.++..
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA-SCDKTAKMWDLSS 117 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE-cCCCcEEEEEcCC
Confidence 3567899999886 566666555677887777642222 223 445578899999877777644 4568888888865
Q ss_pred CCCccEEEEEeCCCCCceEEEE--eCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEe
Q psy5768 388 PKAQRIVVVRLGQHDKPRGIDI--DSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGD 465 (652)
Q Consensus 388 ~~~~~~~~~~~~~~~~P~~Iav--dp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D 465 (652)
. +.+..........++++ +|...+|+.+... +.|...++........+... ...++++.....++.+.
T Consensus 118 ~----~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 118 N----QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD---KTLKFWDTRSSNPMMVLQLP---ERCYCADVIYPMAVVAT 187 (368)
T ss_dssp T----EEEEEEECSSCEEEEEEEECSSCEEEEEEETT---SEEEEECSSCSSCSEEEECS---SCEEEEEEETTEEEEEE
T ss_pred C----CceeeccccCceEEEEEEeCCCCCEEEEccCC---CcEEEEECCCCcEEEEEecC---CCceEEEecCCeeEEEe
Confidence 3 22223334567788998 7754445444332 25666665443332222211 23445555555555554
Q ss_pred CCCCeEEEEecCCC
Q psy5768 466 ARLDKIERCDYDGT 479 (652)
Q Consensus 466 ~~~~~I~~~~ldG~ 479 (652)
. .+.+...+++..
T Consensus 188 ~-~~~i~~~~~~~~ 200 (368)
T 3mmy_A 188 A-ERGLIVYQLENQ 200 (368)
T ss_dssp G-GGCEEEEECSSS
T ss_pred C-CCcEEEEEeccc
Confidence 3 334555555543
No 368
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.99 E-value=31 Score=33.03 Aligned_cols=189 Identities=11% Similarity=-0.016 Sum_probs=98.9
Q ss_pred EEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEE
Q psy5768 316 IIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVV 395 (652)
Q Consensus 316 ~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~ 395 (652)
+.+++++ .+ ++++-...+.|...+ .+.....+......+..+++....++++.+-...+.|...+... ....
T Consensus 107 i~~~~~~--~~-~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~ 178 (313)
T 3odt_A 107 VCSLSFQ--DG-VVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK----VIKT 178 (313)
T ss_dssp EEEEEEE--TT-EEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE----EEEE
T ss_pred EEEEEec--CC-EEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc----eEEE
Confidence 4455553 22 333333345555555 22222222233446677777764455555666677888777321 1222
Q ss_pred EEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEe
Q psy5768 396 VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCD 475 (652)
Q Consensus 396 ~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ 475 (652)
+..........+++.|. +.++..... +.|...++........+...-.....+++.+.+ +|+-+ ...+.|...+
T Consensus 179 ~~~~~~~~i~~~~~~~~-~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~-~~dg~v~iwd 252 (313)
T 3odt_A 179 FSGIHNDVVRHLAVVDD-GHFISCSND---GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSC-GEDRTVRIWS 252 (313)
T ss_dssp ECSSCSSCEEEEEEEET-TEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEE-ETTSEEEEEC
T ss_pred EeccCcccEEEEEEcCC-CeEEEccCC---CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEE-ecCCEEEEEE
Confidence 22224567788999985 444443332 366666665433333333233456788888776 45443 4567888888
Q ss_pred cCCCceEEEecCCCCceeEEEEeCC-EEEEEcCCCCeEEEEEccC
Q psy5768 476 YDGTNRIVLSKISPLHPFDMAVYGE-FIFWTDWVIHAVLRANKYT 519 (652)
Q Consensus 476 ldG~~~~~l~~~~~~~p~glav~~~-~lYwtd~~~~~I~~~~k~~ 519 (652)
+........+........++++..+ .+ .+-...+.|..-+..+
T Consensus 253 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 253 KENGSLKQVITLPAISIWSVDCMSNGDI-IVGSSDNLVRIFSQEK 296 (313)
T ss_dssp TTTCCEEEEEECSSSCEEEEEECTTSCE-EEEETTSCEEEEESCG
T ss_pred CCCCceeEEEeccCceEEEEEEccCCCE-EEEeCCCcEEEEeCCC
Confidence 8665544444433345567776533 33 3333445555444433
No 369
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=83.97 E-value=19 Score=37.59 Aligned_cols=124 Identities=10% Similarity=-0.023 Sum_probs=76.2
Q ss_pred ceeeeEEEccCCEEEE---EeCCCCeEEEEEcCCC-----CC-c-cEEEEEeC-CCCCceEEEEeCCCCEEEEEecCCCC
Q psy5768 357 SVEGLAYEYVHNYLYW---TCNNDATINKIDLDSP-----KA-Q-RIVVVRLG-QHDKPRGIDIDSCDSRIYWTNWNSHL 425 (652)
Q Consensus 357 ~~~glAvDw~~~~LYw---td~~~~~I~~~~~~~~-----~~-~-~~~~~~~~-~~~~P~~Iavdp~~g~Lywtd~~~~~ 425 (652)
.+..|+++..++.|+. +-+..+.|.+.++... .. . ...+.... ......+|+.+|..+.++.+-....
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg- 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG- 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS-
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC-
Confidence 5889999999988887 5555677888776432 00 0 01111111 2356889999998666666544332
Q ss_pred CceEEEeecCCCceEEEEcC-CCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEE
Q psy5768 426 PSIQRAFFSGFGTESIITTD-ITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVL 484 (652)
Q Consensus 426 ~~I~r~~ldG~~~~~l~~~~-l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l 484 (652)
.|...++..... ...... -..+..++..+.++.|+.+. ..+.|...+.+|...+.+
T Consensus 173 -~v~iwD~~~~~~-~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 173 -SIAVLQVTETVK-VCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp -CEEEEEESSSEE-EEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEE
T ss_pred -eEEEEEcCCCcc-eeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccc
Confidence 555555544321 211111 23567899998888888765 456788888886555544
No 370
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=83.64 E-value=0.37 Score=44.60 Aligned_cols=60 Identities=27% Similarity=0.495 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCceeeeccCceeecc-C-CcccCc-ccccCCCceee-cc-CeecCC
Q psy5768 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLME-D-NRSCTI-NTVCSEHDFKC-SD-GMCIPF 608 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~-d-~~C~~~-~~~C~~~~f~C-~~-g~Ci~~ 608 (652)
..+..+||.. ++.|.+.|+..++ +|+|.|+.||.+.. + ++|... ...|.. .| .+ +.|+..
T Consensus 92 d~C~~~~C~~-~g~C~~~~~~~~g-~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n~ 156 (186)
T 1z1y_A 92 DVCQYXNCGE-SGECIVEYLSEIQ-SAGCSCAIGXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXNV 156 (186)
T ss_dssp GGGTTCCCCT-TEEEEEEEETTEE-EEEEEECTEEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEEE
T ss_pred CcCcCCCCCC-CCEEeeCCcCCCC-CceEECCCCCcccCCCCCcceEcCCCcccc---cccccCcceecC
Confidence 3455678863 5678777766554 69999999999865 5 788753 245652 67 43 477753
No 371
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=83.29 E-value=35 Score=33.16 Aligned_cols=206 Identities=9% Similarity=-0.013 Sum_probs=111.5
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc--e---EEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH--R---VLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~--~---~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
..+.+|+|.+..+.++.+-...+.|..-++..... . ..+ .....+..+++.+.++.|+.. ...+.|...+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~ 117 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTT 117 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE-cccccceEEeecc
Confidence 55788999988777777766667777777654321 1 111 224568889999887777654 4457777777654
Q ss_pred CCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcC-CCCCceEEEecCCCE-EEEEe
Q psy5768 388 PKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD-ITMPNALALDHQAEK-LFWGD 465 (652)
Q Consensus 388 ~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~-l~~P~glaiD~~~~~-LYw~D 465 (652)
. ...............+...+...+|+..... ..+...++.+.....+.... ......+++...... ++.+-
T Consensus 118 ~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 118 G---TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp T---EEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred c---ceeeeecCCCCceeEEEEeecCccceeecCC---CeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 2 2222222344566667777766666554432 13443444333222221111 123345566554433 33333
Q ss_pred CCCCeEEEEecCCCceEEEecCCCCceeEEEEeC-CEEEEEcCCCCeEEEEEccCCceEEEE
Q psy5768 466 ARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYG-EFIFWTDWVIHAVLRANKYTGEEVYTL 526 (652)
Q Consensus 466 ~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~-~~lYwtd~~~~~I~~~~k~~g~~~~~~ 526 (652)
...+.|...++.................+|++.. +.++.+-...+.|..-+..+++....+
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 3445677777776554444443323456777752 334444445566666666555444333
No 372
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=83.08 E-value=45 Score=34.29 Aligned_cols=135 Identities=10% Similarity=0.051 Sum_probs=78.8
Q ss_pred EEecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 4 AVSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
+++....+.|.++++. |+....+.. .-..+.+++++ ++.|+... ..+.|..+++........+...
T Consensus 132 l~sg~~dg~i~vwd~~~~~~~~~~~~-------h~~~v~~~~~~--~~~l~s~~---~dg~i~vwd~~~~~~~~~~~~h- 198 (445)
T 2ovr_B 132 IVSGSDDNTLKVWSAVTGKCLRTLVG-------HTGGVWSSQMR--DNIIISGS---TDRTLKVWNAETGECIHTLYGH- 198 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECCC-------CSSCEEEEEEE--TTEEEEEE---TTSCEEEEETTTTEEEEEECCC-
T ss_pred EEEEECCCcEEEEECCCCcEEEEEcC-------CCCCEEEEEec--CCEEEEEe---CCCeEEEEECCcCcEEEEECCC-
Confidence 3444457788899876 444444433 23567888887 45666554 6788999998755333333333
Q ss_pred cCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC
Q psy5768 83 YPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 162 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld 162 (652)
...+. .++++ .+ ..++-+..+.|.+.++........+.........++.| ..+|+.... ...|...++.
T Consensus 199 ~~~v~----~~~~~--~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--dg~i~iwd~~ 267 (445)
T 2ovr_B 199 TSTVR----CMHLH--EK-RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAY--DFMVKVWDPE 267 (445)
T ss_dssp SSCEE----EEEEE--TT-EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEET--TSCEEEEEGG
T ss_pred CCcEE----EEEec--CC-EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEcC--CCEEEEEECC
Confidence 34455 66664 44 44555567889999887554444444434556666663 344544432 3456555554
No 373
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=82.63 E-value=47 Score=34.13 Aligned_cols=190 Identities=15% Similarity=0.088 Sum_probs=101.1
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.++++| +.++++-...+.|...++........+ .....+..|+++ .+ ++++-+..+.|.+.++.......
T Consensus 174 ~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~ 247 (435)
T 1p22_A 174 GSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NG-MMVTCSKDRSIAVWDMASPTDIT 247 (435)
T ss_dssp SCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TT-EEEEEETTSCEEEEECSSSSCCE
T ss_pred CcEEEEEEC---CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CC-EEEEeeCCCcEEEEeCCCCCCce
Confidence 456777773 445555556688888887644332222 333455566654 44 44555667889888886533211
Q ss_pred EEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEE
Q psy5768 393 IVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIE 472 (652)
Q Consensus 393 ~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~ 472 (652)
.............+++.+ ..+|+..... +.|...++........+.........++.+ ++.|+.+ ...+.|.
T Consensus 248 ~~~~~~~~~~~v~~~~~~--~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g-~~dg~i~ 319 (435)
T 1p22_A 248 LRRVLVGHRAAVNVVDFD--DKYIVSASGD---RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSG-SSDNTIR 319 (435)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEE-ETTSCEE
T ss_pred eeeEecCCCCcEEEEEeC--CCEEEEEeCC---CeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEE-eCCCeEE
Confidence 111222333455667664 3556555433 256655555433322222222344566665 4555544 4556788
Q ss_pred EEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEcc
Q psy5768 473 RCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKY 518 (652)
Q Consensus 473 ~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~ 518 (652)
..++........+........++++.+.+|+... ..+.|...+..
T Consensus 320 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~-~dg~i~vwd~~ 364 (435)
T 1p22_A 320 LWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA-YDGKIKVWDLV 364 (435)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEECCSSEEEEEE-TTSCEEEEEHH
T ss_pred EEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEe-CCCcEEEEECC
Confidence 8888754443334433344567777555554443 44556555543
No 374
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=82.62 E-value=46 Score=34.01 Aligned_cols=209 Identities=11% Similarity=0.005 Sum_probs=107.0
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEecc----CCcceEEe-e-----------ccCceeeeEEEc-cCCEEEEEeCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFN----GSNHRVLL-E-----------RQGSVEGLAYEY-VHNYLYWTCNN 376 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~----g~~~~~i~-~-----------~~~~~~glAvDw-~~~~LYwtd~~ 376 (652)
..+.+++|.+..+.|+... ..+.|...+++ |....... . ....+..++.-+ ..+.+..+-..
T Consensus 112 ~~v~~~~~~~~~~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSS-KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCEEEEEEeCCCCEEEEEe-CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 4578889987555555443 44666666552 22111111 0 111222232111 12455556666
Q ss_pred CCeEEEEEcCCCCCccEEEEEeC-CCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEE-cCCCCCceEEE
Q psy5768 377 DATINKIDLDSPKAQRIVVVRLG-QHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIIT-TDITMPNALAL 454 (652)
Q Consensus 377 ~~~I~~~~~~~~~~~~~~~~~~~-~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~-~~l~~P~glai 454 (652)
.+.|.+.++.... ....+... ......+++++|...+|+..... +.|...++........+. ..-.....|++
T Consensus 191 d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 191 LSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp TSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 7889988886532 22222211 24678999999976666655543 245555554321111111 11112235544
Q ss_pred ecC---CCEEEEEeCCCCeEEEEecCCCc-eEEEecCC-------------------------CCceeEEEEeCCEEEEE
Q psy5768 455 DHQ---AEKLFWGDARLDKIERCDYDGTN-RIVLSKIS-------------------------PLHPFDMAVYGEFIFWT 505 (652)
Q Consensus 455 D~~---~~~LYw~D~~~~~I~~~~ldG~~-~~~l~~~~-------------------------~~~p~glav~~~~lYwt 505 (652)
.+. .+++..+-...+.|...++.... .+.+.... .....+|++.++.++.+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s 345 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLT 345 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEe
Confidence 432 23344444455678888886433 33332110 01134567776666677
Q ss_pred cCCCCeEEEEEccCCceEEEEec
Q psy5768 506 DWVIHAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 506 d~~~~~I~~~~k~~g~~~~~~~~ 528 (652)
-...+.|..-+..+++....+..
T Consensus 346 ~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 346 DEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp EGGGTEEEEEETTCGGGCEEEEC
T ss_pred cCCCCeEEEEECCCcccceEEec
Confidence 66777888888777776666553
No 375
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=82.49 E-value=37 Score=32.93 Aligned_cols=198 Identities=7% Similarity=-0.075 Sum_probs=98.6
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCcc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQR 392 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~ 392 (652)
..+.+++|.+....|+.... .+.|.............. .....+..+++...++.|+- -...+.+.+.++.+. .
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~-d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~s~d~~~~~~d~~~~---~ 161 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSW-DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS-GSRDKTIKLWNTLGV---C 161 (340)
T ss_dssp SCEEEEEECTTSSEEEEEET-TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEE-EETTSCEEEECTTSC---E
T ss_pred CCEEEEEECCCCCEEEEEcc-cccceEEeecccceeeeecCCCCceeEEEEeecCcccee-ecCCCeEEEEEeCCC---c
Confidence 45778889887666655543 466776666554333222 33345556666666665544 344566666665432 2
Q ss_pred EEEEEe-CCCCCceEEEEeCCCCE-EEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCe
Q psy5768 393 IVVVRL-GQHDKPRGIDIDSCDSR-IYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDK 470 (652)
Q Consensus 393 ~~~~~~-~~~~~P~~Iavdp~~g~-Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~ 470 (652)
...... ........+++.+.... ++.+-... ..|...++............-...+.|++.+.++.|+-+. ..+.
T Consensus 162 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d--~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~Dg~ 238 (340)
T 4aow_A 162 KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD--KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG-KDGQ 238 (340)
T ss_dssp EEEECSSSCSSCEEEEEECSCSSSCEEEEEETT--SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTCE
T ss_pred eEEEEeccccCcccceEEccCCCCcEEEEEcCC--CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe-CCCe
Confidence 222221 22345566777665433 33333221 2555444443322222221223456889988777666553 4467
Q ss_pred EEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCC
Q psy5768 471 IERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTG 520 (652)
Q Consensus 471 I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g 520 (652)
|...++............ .....+++..+..+.+-...+.|...+..++
T Consensus 239 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 239 AMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCC
Confidence 777787765444333322 3334444443322222223344544444333
No 376
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=82.41 E-value=0.31 Score=36.12 Aligned_cols=32 Identities=28% Similarity=0.716 Sum_probs=20.7
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCceeeeccCcee
Q psy5768 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKV 579 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~ 579 (652)
..|..+||.. | -...|...++ +|+|.||.||.
T Consensus 12 d~C~snPC~n--g-a~gtC~~~~g-~y~C~C~~Gy~ 43 (61)
T 2k2s_B 12 AACSSNPCGP--E-AAGTCKETNS-GYICRCNQGYR 43 (61)
T ss_dssp CHHHHCSSCS--S-SCCEEEECSS-EEEEECCTTEE
T ss_pred CcCcCCCCcC--C-CccccccCCC-ceEeECCCCCc
Confidence 3455677763 2 0014555555 69999999998
No 377
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=82.15 E-value=0.42 Score=42.15 Aligned_cols=28 Identities=14% Similarity=0.228 Sum_probs=22.9
Q ss_pred cccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 560 DICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 560 ~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
+.|+..++ +|+|.|+.||.+..+ +.|.+
T Consensus 110 ~~C~n~~g-~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 110 TVCFNTVG-SYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp SEEEECSS-CEEEECCSSSCBCTTCCSSBT
T ss_pred CEEECCCC-CEEeeCCCCcccCCCCccCcc
Confidence 46776665 699999999999888 77765
No 378
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=81.60 E-value=0.68 Score=31.77 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=16.2
Q ss_pred cce--ecCCCceEEEeCCccccCCCccc
Q psy5768 250 LCL--YNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~--~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
.|+ ....+|+|.|+.||. |..|.
T Consensus 16 ~C~~~~~~~~~~C~C~~G~~---G~~Ce 40 (45)
T 1a3p_A 16 VXMHIESLDSYTCNCVIGYS---GDRCQ 40 (45)
T ss_dssp EEEECTTTSSEEEECCTTEE---TTTTC
T ss_pred EEEeecCCCCEEEEcCCCCc---CCcCC
Confidence 455 334489999999984 56675
No 379
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=81.11 E-value=73 Score=35.35 Aligned_cols=78 Identities=6% Similarity=0.064 Sum_probs=47.2
Q ss_pred ceEEEecCCCEEEEEeC-----------------------------------CCCeEEEEecCCCce-EEEecCCCCcee
Q psy5768 450 NALALDHQAEKLFWGDA-----------------------------------RLDKIERCDYDGTNR-IVLSKISPLHPF 493 (652)
Q Consensus 450 ~glaiD~~~~~LYw~D~-----------------------------------~~~~I~~~~ldG~~~-~~l~~~~~~~p~ 493 (652)
.++++|+.++.+|+.-. ..+.|..+|+..... -..-......--
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~ 463 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGG 463 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCc
Confidence 35899999999997311 115577777654332 222111111112
Q ss_pred EEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEec
Q psy5768 494 DMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRK 528 (652)
Q Consensus 494 glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~~ 528 (652)
.++..++.||..+ ..+.++.++..+|+....+..
T Consensus 464 ~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 464 TLSTAGNLVFQGT-AAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEEC
T ss_pred eeEeCCCEEEEEC-CcccchhhhhhcChhheEecC
Confidence 3556688888884 567888899888887655543
No 380
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.67 E-value=42 Score=32.36 Aligned_cols=176 Identities=10% Similarity=0.013 Sum_probs=90.4
Q ss_pred EEecCCCCeEEEEecCCCe---eEEEecCCCCCCCCCCCeeEEEEECC--CCEEEEEeccCCcceEEEEEcCCCc--cEE
Q psy5768 4 AVSSPTQSKIVVCNLEGEY---QTTILSNESNDTSTLSKISSIAVWPV--KGKMFWSNVTKQVVTIEMAFMDGTK--RET 76 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~lyw~d~~~~~~~I~~~~~dgs~--~~~ 76 (652)
+++....+.|++++++... ...+.. .-..+..|+++|. ...|.-.. ..+.|..+++.... ...
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~g~~l~s~s---~d~~v~~wd~~~~~~~~~~ 139 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVHAV-------HSASVNSVQWAPHEYGPMLLVAS---SDGKVSVVEFKENGTTSPI 139 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEECC-------CSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEEBCSSSCBCCE
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEeec-------CCCceeEEEeCcCCCCcEEEEEE---CCCcEEEEEecCCCceeee
Confidence 4444456777788776432 122221 2246889999986 44555444 56788888776432 122
Q ss_pred EEeCCCcCCccCCCCcEEEEccC------------CcEEEEeCCCCEEEEEEcCCCc----EEEEEeCCCCCceeEEEcC
Q psy5768 77 VVSQKKYPAVTACNLHIAVDWIA------------QNIYWSDPKENVIEVARLTGQY----RYVLISGGVDQPSALAVDP 140 (652)
Q Consensus 77 v~~~~~~~~p~~~~~~lavDw~~------------~~lY~~d~~~~~I~v~~~dg~~----~~~l~~~~~~~P~~iavd~ 140 (652)
.+... ...+. .+++.+.. ++++.+-+..+.|.+.+++... ....+.+-....+.++..|
T Consensus 140 ~~~~h-~~~v~----~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 140 IIDAH-AIGVN----SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp EEECC-SSCEE----EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred eeecc-cCccc----eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC
Confidence 23333 33344 55554321 3455665566777777765432 1112222234578899998
Q ss_pred CC--CeEEEEecCCCCeEEEEeCCCCC---cEEEEe-ec-ccCceeEEEeccCCEEEEEeCC
Q psy5768 141 ES--GYLFWSESGKIPLIARAGLDGKK---QTILAQ-EI-IMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 141 ~~--g~lywtd~~~~~~I~~~~ldg~~---~~~~~~-~~-~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
.. +.++.+-. ....|..-+++... ...++. .. -.....+++.+.+..|.-...|
T Consensus 215 ~~~~~~~las~s-~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 215 TVLLRSYMASVS-QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp CCSSSEEEEEEE-TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred CCCCceEEEEEE-CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence 53 45544432 23445554544321 122221 11 1244667777666666555555
No 381
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=80.66 E-value=0.6 Score=32.34 Aligned_cols=27 Identities=26% Similarity=0.486 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccccccCCCCceeeeccCceee
Q psy5768 549 TPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 549 ~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l 580 (652)
+||. ||.|..+ ...++++|.|+.||..
T Consensus 12 ~pC~--nG~C~~~---~~~~~~~C~C~~GytG 38 (46)
T 1k36_A 12 GYCL--HGQCIYL---VDMSQNYCRCEVGYTG 38 (46)
T ss_dssp SSCS--SEEEEEE---TTTTEEEEEECTTCSS
T ss_pred CCCC--CCEeecc---CCCCCEEEECCCCCcc
Confidence 8887 3555431 1224799999999964
No 382
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=80.23 E-value=43 Score=32.21 Aligned_cols=202 Identities=8% Similarity=-0.018 Sum_probs=104.3
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCc-c-eEE---eeccCceeeeEEEcc-CCEEEEEeCCCCeEEEEEcCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-H-RVL---LERQGSVEGLAYEYV-HNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~-~-~~i---~~~~~~~~glAvDw~-~~~LYwtd~~~~~I~~~~~~~ 387 (652)
..+.+++|++..+.|.... ..+.|...+++... . +.+ ......+..|++.+. .+.+..+-...+.|.+.++..
T Consensus 12 ~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred cceeEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 4577889988666555544 45777777766432 1 111 133446778888764 244445556678888888765
Q ss_pred CCCc-----cEEEEEe-CCCCCceEEEEeCC--CCEEEEEecCCCCCceEEEeecCCC-ceEEE-E-----------cCC
Q psy5768 388 PKAQ-----RIVVVRL-GQHDKPRGIDIDSC--DSRIYWTNWNSHLPSIQRAFFSGFG-TESII-T-----------TDI 446 (652)
Q Consensus 388 ~~~~-----~~~~~~~-~~~~~P~~Iavdp~--~g~Lywtd~~~~~~~I~r~~ldG~~-~~~l~-~-----------~~l 446 (652)
.... .+.+... .......+|+++|. ..+|+.+... +.|...++.... ...+. . ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND---GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC---CcEEEecCCChHHhccccccccccccccccCCcc
Confidence 3211 1333333 33467788999997 5555555433 255555543322 11111 0 112
Q ss_pred CCCceEEEecC---CCEEEEEeCCCCeEEEEecCCCceEEEe--cCCCCceeEEEEeCC-----EEEEEcCCCCeEEEEE
Q psy5768 447 TMPNALALDHQ---AEKLFWGDARLDKIERCDYDGTNRIVLS--KISPLHPFDMAVYGE-----FIFWTDWVIHAVLRAN 516 (652)
Q Consensus 447 ~~P~glaiD~~---~~~LYw~D~~~~~I~~~~ldG~~~~~l~--~~~~~~p~glav~~~-----~lYwtd~~~~~I~~~~ 516 (652)
.....+++.+. ...|..+... +.+...+........+. ........++++..+ .++.+-...+.|..-+
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALE-QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETT-EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred cceeEEEeccCCCCCcEEEEecCC-CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 23456777665 5555555433 33322233333322222 112234567777644 5666655666665555
Q ss_pred ccCC
Q psy5768 517 KYTG 520 (652)
Q Consensus 517 k~~g 520 (652)
..++
T Consensus 247 ~~~~ 250 (351)
T 3f3f_A 247 ITEK 250 (351)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 4443
No 383
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=79.43 E-value=24 Score=36.15 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=79.3
Q ss_pred eEEEEecCCCeeEEEecCCC--CCCC-----CCCCeeEEEEECC--CCEEEEEeccCCcceEEEEEcCCCccEEEEeC--
Q psy5768 12 KIVVCNLEGEYQTTILSNES--NDTS-----TLSKISSIAVWPV--KGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ-- 80 (652)
Q Consensus 12 ~I~~~~~~g~~~~~~~~~~~--~~~~-----~~~~~~~v~~d~~--~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~-- 80 (652)
.|++++-.|+....+..... .... .+..+.+|++++. .+.||..- ..+.|+|..-.|...+.+...
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~---~~ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT---SPQGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE---ETTEEEEESSTTSBCEECHHHHT
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe---cCCcEEEEcCCCCCeEECcCccC
Confidence 57777666766655432100 0000 2346778999984 58888754 346788887667665554211
Q ss_pred --------------C-CcCCccCCCCcEEEEcc-CCcEEEEeCCCCEEEEEEcCCCcEEEEEeC----CC--------CC
Q psy5768 81 --------------K-KYPAVTACNLHIAVDWI-AQNIYWSDPKENVIEVARLTGQYRYVLISG----GV--------DQ 132 (652)
Q Consensus 81 --------------~-~~~~p~~~~~~lavDw~-~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~----~~--------~~ 132 (652)
+ ...... .|++|.. .++||+... .+.|.+.+-.|+.-+.+... .+ ..
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~----~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~ 233 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMH----SILVDPRDPKHLYIGMS-SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHD 233 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEE----EEEECTTCTTCEEEEEE-TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBC
T ss_pred CccccccccccccCCCCCCcee----EEEECCCCCCEEEEEEC-CCCEEEECCCCCCceECCCCccccccCCCccccCcc
Confidence 0 001123 7888874 467887753 34577665555432222111 01 13
Q ss_pred ceeEEEcCCC-CeEEEEecCCCCeEEEEeCCCC
Q psy5768 133 PSALAVDPES-GYLFWSESGKIPLIARAGLDGK 164 (652)
Q Consensus 133 P~~iavd~~~-g~lywtd~~~~~~I~~~~ldg~ 164 (652)
...|++||.+ +.||... ...|.+..-.|.
T Consensus 234 ~~~i~~~~~~~~~l~vg~---~~gl~~s~D~G~ 263 (394)
T 3b7f_A 234 PHCVVQHPAAPDILYQQN---HCGIYRMDRREG 263 (394)
T ss_dssp EEEEEECSSSTTEEEEEE---TTEEEEEETTTT
T ss_pred eeEEEECCCCCCEEEEEc---CCeEEEeCCCCC
Confidence 5789999964 6777764 346777765454
No 384
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=79.30 E-value=1.2 Score=31.75 Aligned_cols=31 Identities=29% Similarity=0.568 Sum_probs=19.6
Q ss_pred CCCCCCCCCCccccc--cCCCCceeeeccCceeeccCCcccC
Q psy5768 549 TPCRHLNGNCDDICK--LDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 549 ~~C~~~ng~Cs~lCl--~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
+||. ||+ .|+ ... ++++|.||.||.. .+|..
T Consensus 12 ~pC~--ngg---~C~~~~~~-~~~~C~C~~G~~G---~~Ce~ 44 (53)
T 1egf_A 12 GYCL--NGG---VCMHIESL-DSYTCNCVIGYSG---DRCQT 44 (53)
T ss_dssp CSSC--SSC---EEEEESSS-SCEEEECCTTCCS---SSSCC
T ss_pred CcCC--CCc---EEEeeCCC-CCEEEECCCCCcC---CcCCc
Confidence 3776 332 455 333 4799999999954 45653
No 385
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=78.80 E-value=0.8 Score=43.11 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=19.2
Q ss_pred CCCCCCCCCeeecCC--CCcccCCC
Q psy5768 629 CAMRDCRPGYFKCDN--NKCILSSH 651 (652)
Q Consensus 629 C~~~~C~~~~f~C~~--~~Ci~~~~ 651 (652)
+....|++++|+|.| |+||+.+|
T Consensus 49 ~~~~~C~~~~F~C~~~~g~CI~~~~ 73 (217)
T 2gtl_M 49 LEEHHCDEHESECRGDVPECIHDLL 73 (217)
T ss_dssp TSCCCCCTTEEECSSSSCCEEEGGG
T ss_pred CCCCCCCCCceecCCCCCcEechhh
Confidence 445689999999964 99999876
No 386
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=78.57 E-value=52 Score=32.11 Aligned_cols=177 Identities=11% Similarity=-0.016 Sum_probs=86.1
Q ss_pred EecCCCCeEEEEecCCCe---eEEEecCCCCCCCCCCCeeEEEEECCC-CEEEEEeccCCcceEEEEEcCCCccEEEEeC
Q psy5768 5 VSSPTQSKIVVCNLEGEY---QTTILSNESNDTSTLSKISSIAVWPVK-GKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ 80 (652)
Q Consensus 5 v~~~~~~~I~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~v~~d~~~-~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~ 80 (652)
++....+.|.+++++... ...+.. .-..+.+|+++|.. +.++.+- ...+.|+.+++.+.....+...
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~~~~~-------h~~~V~~v~~~p~~~g~~lasg--s~D~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSHEHAG-------HDSSVNSVCWAPHDYGLILACG--SSDGAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEEEECC-------CSSCCCEEEECCTTTCSCEEEE--CSSSCEEEEEECSSSCEEECCB
T ss_pred EEEECCCEEEEEECCCCcceEEEEccC-------CCCceEEEEECCCCCCcEEEEE--cCCCCEEEEecCCCCCcceeee
Confidence 333345677788776432 222221 22467899999873 4455554 4667888877765432221111
Q ss_pred --CCcCCccCCCCcEEEEccC----------------CcEEEEeCCCCEEEEEEcCCCc---EEEEEeCCCCCceeEEEc
Q psy5768 81 --KKYPAVTACNLHIAVDWIA----------------QNIYWSDPKENVIEVARLTGQY---RYVLISGGVDQPSALAVD 139 (652)
Q Consensus 81 --~~~~~p~~~~~~lavDw~~----------------~~lY~~d~~~~~I~v~~~dg~~---~~~l~~~~~~~P~~iavd 139 (652)
+...... .+++.... ++++.+-+..+.|.+-+++... ....+..-....+.++..
T Consensus 146 ~~~h~~~v~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s 221 (316)
T 3bg1_A 146 NNAHTIGCN----AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA 221 (316)
T ss_dssp TTSSSSCBC----CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC
T ss_pred eccccCCcc----eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEec
Confidence 1012233 44443321 2344554555667666665331 111122222346788888
Q ss_pred CCC---CeEEEEecCCCCeEEEEeCCCC----CcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 140 PES---GYLFWSESGKIPLIARAGLDGK----KQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 140 ~~~---g~lywtd~~~~~~I~~~~ldg~----~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
|.. +.++.+-. ....|..-+++.. ....++..--.....+++.+.+..|.-...|
T Consensus 222 p~~~~~~~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 222 PSIGLPTSTIASCS-QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp CCSSCSCCEEEEEE-TTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS
T ss_pred CCCCCCCceEEEEc-CCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC
Confidence 854 23334322 3456666555431 1111222112345677777666655555554
No 387
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=78.53 E-value=57 Score=32.62 Aligned_cols=129 Identities=11% Similarity=0.031 Sum_probs=68.2
Q ss_pred CCEEEEEeccCCcceEEEEEcC-CCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC-CCcEEEEE
Q psy5768 49 KGKMFWSNVTKQVVTIEMAFMD-GTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT-GQYRYVLI 126 (652)
Q Consensus 49 ~~~lyw~d~~~~~~~I~~~~~d-gs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d-g~~~~~l~ 126 (652)
++.||+.. ..+.++.+++. |..+ -... ...+. +++++ .++||++.. .+.+...+.. |+.....-
T Consensus 239 ~~~v~~~~---~~g~l~~~d~~tG~~~---w~~~-~~~~~----~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 239 NGVVFALA---YNGNLTALDLRSGQIM---WKRE-LGSVN----DFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp TTEEEEEC---TTSCEEEEETTTCCEE---EEEC-CCCEE----EEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEe---cCcEEEEEECCCCcEE---eecc-CCCCC----CceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeec
Confidence 68888876 45688888874 4422 1222 33455 77776 788998874 5678888864 55332221
Q ss_pred eCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCC-CCCcEEEEeecccCceeEEEeccCCEEEEEeCCCC
Q psy5768 127 SGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKG 197 (652)
Q Consensus 127 ~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ld-g~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g~ 197 (652)
..........++. +|.||..+. ...|...+.. |+.....-...-......++ .+++||+...+|.
T Consensus 305 ~~~~~~~~~~~~~--~~~l~v~~~--~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 305 DLLHRLLTSPVLY--NGNLVVGDS--EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGT 370 (376)
T ss_dssp TTTTSCCCCCEEE--TTEEEEECT--TSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSC
T ss_pred ccCCCcccCCEEE--CCEEEEEeC--CCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCE
Confidence 1111223344453 678888764 3456666643 43222211101011112222 3678888777743
No 388
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=78.50 E-value=93 Score=35.01 Aligned_cols=446 Identities=11% Similarity=0.005 Sum_probs=207.1
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecC-CCCCCCCCCCeeEEEEECC-CCEEEEEeccCCcceEEEEEcCCCccEEEEeC
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSN-ESNDTSTLSKISSIAVWPV-KGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQ 80 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~v~~d~~-~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~ 80 (652)
|.|++. .+++.+++........+... ..........+..|..|.. ++.|++.. ....|++++......+.+...
T Consensus 80 lWigt~-~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t---~~~gl~~~~~~~~~~~~~~~~ 155 (781)
T 3v9f_A 80 IWIATQ-RAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCT---YYRGIEYLDIATGKFTHYNKS 155 (781)
T ss_dssp EEEEES-SSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEE---SSSCEEEEETTTTEEEEESTT
T ss_pred EEEEeC-CCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEE---CCCCeeEEECCCCeEEeeccC
Confidence 445432 22677888775555554211 0000111235778888741 57887754 245788888764433333111
Q ss_pred C----CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeC-----C--CCCceeEEEcCCCCeEEEEe
Q psy5768 81 K----KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG-----G--VDQPSALAVDPESGYLFWSE 149 (652)
Q Consensus 81 ~----~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~-----~--~~~P~~iavd~~~g~lywtd 149 (652)
. ....+. .|+.|. .++||+.- ..+-+.+.+......+.+... . -...+.|..|+ +|.|+...
T Consensus 156 ~~~~l~~~~i~----~i~~d~-~g~lwigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lwigt 228 (781)
T 3v9f_A 156 TVPALPSEQTW----TATEAE-DGKLYIGH-VEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDT-NGNIWIGT 228 (781)
T ss_dssp TCTTCSCCCEE----EEEEEE-TTEEEEEE-TTTEEEEEETTTTEEEEECC--------CCSSEEEEEECT-TCCEEEEE
T ss_pred cccCCCccceE----EEEECC-CCCEEEEe-cCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcC-CCCEEEEe
Confidence 1 011234 677774 56666553 334677787766533332111 1 13567888997 67777664
Q ss_pred cCCCCeEEEEeCCCCCcEEEEee-------cccCceeEEEeccCCEEEEEeCCCCcEEEEEecCCCCceEEEeecCCCCC
Q psy5768 150 SGKIPLIARAGLDGKKQTILAQE-------IIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSY 222 (652)
Q Consensus 150 ~~~~~~I~~~~ldg~~~~~~~~~-------~~~~p~gl~lD~~~~~ly~~d~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 222 (652)
. . .+.+.+........+... .-.....|..|. .+.|++....+|- ..+ +....... ....
T Consensus 229 ~--~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~~Gl-~~~--~~~~~~~~-~~~~----- 295 (781)
T 3v9f_A 229 S--K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLK-DNKLWIATELNGI-MIL--DLQQNQFL-LPEQ----- 295 (781)
T ss_dssp T--T-EEEEEETTTTEEEC-----------CCCCEEEEEECT-TSEEEEEESSSCE-EEE--ETTCC-------------
T ss_pred C--C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECC-CCCEEEEeCCCCe-EEE--CCCCCeee-eeec-----
Confidence 3 2 677776554322222111 012355666664 4455443332332 111 00000000 0000
Q ss_pred cceeeeeeeccCCCCCCCCCCCCCCcccceecCCCceEEEeCCccccCCCcccccceEEEEee-ecceeEEecCCCCCCC
Q psy5768 223 LKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSR-VNRIDSIHMTDKSDLN 301 (652)
Q Consensus 223 ~~~i~v~~~~~q~~~n~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~ 301 (652)
.-|..... ..++ ++ +....-.+.+. +.+.-|.+++ ...|..++. ....
T Consensus 296 ----~~f~~~~~-~~~~----~~-------l~~~~v~~i~~------------D~~g~lWigt~~~Gl~~~~~-~~~~-- 344 (781)
T 3v9f_A 296 ----IRFEFIRE-GDNN----YS-------LSNASARYIFQ------------DSFNNIWIGTWGGGINFISN-APPT-- 344 (781)
T ss_dssp ------CEEECB-CSST----TS-------BSSSCEEEEEE------------CSSCCEEEEEBSSCEEEECS-SCCS--
T ss_pred ----cccccccC-CCCC----CC-------CCCCeEEEEEE------------eCCCCEEEEecCCeEEEeCC-CCCc--
Confidence 00000000 0000 00 00001111111 1122244444 445555543 1111
Q ss_pred CCceeeee------cc--ccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe--e--ccCceeeeEEEccCCE
Q psy5768 302 SPFESIRN------ST--MMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL--E--RQGSVEGLAYEYVHNY 369 (652)
Q Consensus 302 ~p~~~~~~------~~--~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~--~--~~~~~~glAvDw~~~~ 369 (652)
+..+.. .. ....+.++..|.. +.|++... .+-|++.+......+.+. . ....+.+|+.|.. ++
T Consensus 345 --~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g~ 419 (781)
T 3v9f_A 345 --FHTWSYSPTQMNESSLSNKVVSSVCDDGQ-GKLWIGTD-GGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE-GN 419 (781)
T ss_dssp --CEEEC----CCCSSCCSSSCEEEEEECTT-SCEEEEEB-SSCEEEEETTEEEEECC-----CCCSBEEEEEECTT-SC
T ss_pred --ceeeccCccccccCCCCCcceEEEEEcCC-CCEEEEeC-CCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC-CC
Confidence 111100 00 1134677777754 56666543 344777765432111111 0 1235778888854 45
Q ss_pred EEEEeCCCCeEEEEEcCCCCCccEEEEEe--CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcC--
Q psy5768 370 LYWTCNNDATINKIDLDSPKAQRIVVVRL--GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTD-- 445 (652)
Q Consensus 370 LYwtd~~~~~I~~~~~~~~~~~~~~~~~~--~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~-- 445 (652)
|++. ...+.+.+++.... ....+.. ......++|+.|+ .|.|++...+ .|.+.+.++...+.+....
T Consensus 420 lWig-t~~~Gl~~~~~~~~---~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~~----Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 420 LWFG-TYLGNISYYNTRLK---KFQIIELEKNELLDVRVFYEDK-NKKIWIGTHA----GVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp EEEE-ETTEEEEEECSSSC---EEEECCSTTTCCCCEEEEEECT-TSEEEEEETT----EEEEEESSSSSCCEEECTTTS
T ss_pred EEEE-eccCCEEEEcCCCC---cEEEeccCCCCCCeEEEEEECC-CCCEEEEECC----ceEEEeCCCCeEEecccCccc
Confidence 5544 33345766664321 1111111 1235678899998 6788877542 6777776654444433211
Q ss_pred ---CCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecC-CC--CceeEEEEeC-CEEEEEcCCCCeE-EEEEc
Q psy5768 446 ---ITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKI-SP--LHPFDMAVYG-EFIFWTDWVIHAV-LRANK 517 (652)
Q Consensus 446 ---l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~-~~--~~p~glav~~-~~lYwtd~~~~~I-~~~~k 517 (652)
...+.+|+.|. .++|+.+-.. +-+.+++.++...+.+... .+ ....+|..+. +.|+.+.. +.+ .+.++
T Consensus 491 ~~~~~~i~~i~~d~-~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~ 566 (781)
T 3v9f_A 491 QLLENFVRSIAQDS-EGRFWIGTFG-GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPSA 566 (781)
T ss_dssp SCSCSCEEEEEECT-TCCEEEEESS-SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESCT
T ss_pred ccccceeEEEEEcC-CCCEEEEEcC-CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEECC
Confidence 13466888885 4667666442 3477888776554444322 12 3456777764 56665543 345 77776
Q ss_pred cCCc
Q psy5768 518 YTGE 521 (652)
Q Consensus 518 ~~g~ 521 (652)
.+++
T Consensus 567 ~~~~ 570 (781)
T 3v9f_A 567 RNFD 570 (781)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 5543
No 389
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=77.62 E-value=0.46 Score=35.19 Aligned_cols=24 Identities=17% Similarity=0.430 Sum_probs=17.8
Q ss_pred cceecCCCceEEEeCCccccCCCccc
Q psy5768 250 LCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
.|...+++|+|.|+.||.. |..|.
T Consensus 26 tC~~~~g~y~C~C~~Gy~~--G~~C~ 49 (61)
T 2k2s_B 26 TCKETNSGYICRCNQGYRI--SLDGT 49 (61)
T ss_dssp EEEECSSEEEEECCTTEEE--EECSS
T ss_pred ccccCCCceEeECCCCCcc--CCCCC
Confidence 4777777899999999941 34454
No 390
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=77.41 E-value=71 Score=34.23 Aligned_cols=146 Identities=5% Similarity=-0.067 Sum_probs=81.0
Q ss_pred CCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCC-ccEEEEeCCCcCCccCCCCcEEEEccC-C-cEEEEeCCCCEEEE
Q psy5768 38 SKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT-KRETVVSQKKYPAVTACNLHIAVDWIA-Q-NIYWSDPKENVIEV 114 (652)
Q Consensus 38 ~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs-~~~~v~~~~~~~~p~~~~~~lavDw~~-~-~lY~~d~~~~~I~v 114 (652)
..+.++++++. +.|.-.. .+++|..+++... .....+... ...+. +|++.+.. + ++..+-+..+.|.+
T Consensus 267 ~~v~sv~~s~~-~~lasgs---~DgtV~lWD~~~~~~~~~~~~~H-~~~V~----sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 267 SLITTFDFLSP-TTVVCGF---KNGFVAEFDLTDPEVPSFYDQVH-DSYIL----SVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp TCEEEEEESSS-SEEEEEE---TTSEEEEEETTBCSSCSEEEECS-SSCEE----EEEEECCTTSCCEEEEEETTSEEEE
T ss_pred CCEEEEEecCC-CeEEEEe---CCCEEEEEECCCCCCceEEeecc-cccEE----EEEEEcCCCCCeEEEEeccCCeEEE
Confidence 56889999864 5666544 6789999998743 222223334 34566 77544433 3 67777777888888
Q ss_pred EEcCCC-cEEEEEeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCC-cEEEEeecccCceeEEEeccCCEEEE
Q psy5768 115 ARLTGQ-YRYVLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILAQEIIMPIKDITLDLKFFSAFY 191 (652)
Q Consensus 115 ~~~dg~-~~~~l~~~-~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~-~~~~~~~~~~~p~gl~lD~~~~~ly~ 191 (652)
.++... ...++... .......++..|. |..+.+-. ....|..-++.... ...+.. -....+.|++.+.+..|.-
T Consensus 338 WD~~~~~~~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~-~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 338 FNPKDIATTKTTVSRFRGSNLVPVVYCPQ-IYSYIYSD-GASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp ECGGGHHHHCEEEEECSCCSCCCEEEETT-TTEEEEEC-SSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEE
T ss_pred EECCCCCcccccccccccCcccceEeCCC-cCeEEEeC-CCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEE
Confidence 887542 22222221 1123568999985 54455432 23356555554322 233322 2345677777665544433
Q ss_pred EeCC
Q psy5768 192 RNLS 195 (652)
Q Consensus 192 ~d~~ 195 (652)
...|
T Consensus 415 gs~D 418 (524)
T 2j04_B 415 GSAD 418 (524)
T ss_dssp EETT
T ss_pred EECC
Confidence 3333
No 391
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=77.39 E-value=2.2 Score=37.26 Aligned_cols=30 Identities=33% Similarity=0.804 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCCCccccccCCC-CceeeeccCceee
Q psy5768 546 CAKTPCRHLNGNCDDICKLDET-GQVVCSCFTGKVL 580 (652)
Q Consensus 546 ~~~~~C~~~ng~Cs~lCl~~~~-~~~~C~Cp~g~~l 580 (652)
+..+||.. +| .|+.... ++|+|.|+.||..
T Consensus 3 C~~~pC~~-~g----~C~~~~~~g~~~C~C~~G~~G 33 (143)
T 4d90_A 3 CDPNPCEN-GG----ICLPGLADGSFSCECPDGFTD 33 (143)
T ss_dssp CCSCCCGG-GC----EEEC-----CCEEECCTTCCT
T ss_pred CCCCcCCC-CC----EeeCCCCCCCEEeECCCCCCC
Confidence 45567752 22 5665543 4799999999974
No 392
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=77.06 E-value=1.3 Score=38.50 Aligned_cols=72 Identities=17% Similarity=0.291 Sum_probs=34.8
Q ss_pred cccccCCCCceeeeccCceeeccCCcccCcccccCCCceeecc-CeecCCc--cCCCCCCCCCCCCCCCCCCCCC--CCC
Q psy5768 560 DICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSD-GMCIPFN--QTCDRVYNCHDKSDEGILYCAM--RDC 634 (652)
Q Consensus 560 ~lCl~~~~~~~~C~Cp~g~~l~~d~~C~~~~~~C~~~~f~C~~-g~Ci~~~--~~Cd~~~dC~d~sde~~~~C~~--~~C 634 (652)
..|+..+. +|+|.|+.||.. ..|......|.+ -.|.+ +.|+... +.| .|..|.-.. .|+. ..|
T Consensus 57 ~~C~~~~g-~~~C~C~~G~~G---~~C~~~~~~C~~--~~C~~~g~C~~~~g~~~C----~C~~G~~G~--~C~~~i~~C 124 (135)
T 2vj3_A 57 ATCLDQIG-EFQCICMPGYEG---VHCEVNTDECAS--SPCLHNGRCLDKINEFQC----ECPTGFTGH--LCQVDLHHI 124 (135)
T ss_dssp CEEEECSS-CEEEECCTTEES---SSSCEECCTTTT--CCSTTTCEEEECSSCEEE----ECCTTEESS--SSCEECC--
T ss_pred CEEeCCCC-CceeeCCCCCcC---CcceecCCcccC--CCcCCCCEeECCCCCeEE----ECCCCCcCC--ccCccCccc
Confidence 35666554 699999999974 346432344543 25664 5777542 334 566555433 3642 346
Q ss_pred CCCeeecCC
Q psy5768 635 RPGYFKCDN 643 (652)
Q Consensus 635 ~~~~f~C~~ 643 (652)
......|.|
T Consensus 125 ~~~~~~c~~ 133 (135)
T 2vj3_A 125 LDAQKMVWN 133 (135)
T ss_dssp ---------
T ss_pred cCCCcceee
Confidence 665555544
No 393
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=77.02 E-value=68 Score=32.66 Aligned_cols=210 Identities=10% Similarity=0.032 Sum_probs=112.2
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccC---Cc-c--eEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNG---SN-H--RVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDS 387 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g---~~-~--~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~ 387 (652)
..+.+++|.+.++.++.+-...+.|...++.. .. . .........+..|++.+.++.|+ +-...+.|.+.++..
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA-VSSKDGQIIVLKVNH 142 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEEecc
Confidence 45788999984455556555667788777643 11 1 12223345788999987666555 445567777777631
Q ss_pred C-CCccEEEEE--------eC---CCCCceEEE--EeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEc--CCCCCce
Q psy5768 388 P-KAQRIVVVR--------LG---QHDKPRGID--IDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITT--DITMPNA 451 (652)
Q Consensus 388 ~-~~~~~~~~~--------~~---~~~~P~~Ia--vdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~--~l~~P~g 451 (652)
. .+....... .. .......++ ..|...+|+..... +.|...++........+.. .-.....
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~ 219 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL---SRVIIFDIRTLERLQIIENSPRHGAVSS 219 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT---SEEEEEETTTCCEEEEEECCGGGCCEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCeeeEEEccCCCCCceEE
Confidence 1 011111110 00 122233333 23434444444332 3666666654433333332 2346789
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEecCCCceEEEec-CCCCceeEEEEe-----CCEEEEEcCCCCeEEEEEccCCceEEE
Q psy5768 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSK-ISPLHPFDMAVY-----GEFIFWTDWVIHAVLRANKYTGEEVYT 525 (652)
Q Consensus 452 laiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~-~~~~~p~glav~-----~~~lYwtd~~~~~I~~~~k~~g~~~~~ 525 (652)
|++++.+..|+-+. ..+.|...++........+. .......+|++. ++.+..+-...+.|..-+..+++....
T Consensus 220 ~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 220 ICIDEECCVLILGT-TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp EEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEc-CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 99988877777664 34678888887543322222 221223455332 234555666667787778777776666
Q ss_pred Eec
Q psy5768 526 LRK 528 (652)
Q Consensus 526 ~~~ 528 (652)
+..
T Consensus 299 ~~~ 301 (437)
T 3gre_A 299 FIN 301 (437)
T ss_dssp EES
T ss_pred EEc
Confidence 553
No 394
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=76.51 E-value=21 Score=37.23 Aligned_cols=117 Identities=9% Similarity=-0.077 Sum_probs=74.4
Q ss_pred CeeEEEEECCCCEEEE---EeccCCcceEEEEEcCCC------c---cEEE--EeCCCcCCccCCCCcEEEEccCCcEEE
Q psy5768 39 KISSIAVWPVKGKMFW---SNVTKQVVTIEMAFMDGT------K---RETV--VSQKKYPAVTACNLHIAVDWIAQNIYW 104 (652)
Q Consensus 39 ~~~~v~~d~~~~~lyw---~d~~~~~~~I~~~~~dgs------~---~~~v--~~~~~~~~p~~~~~~lavDw~~~~lY~ 104 (652)
.+.+|+|++.+++|++ +- ...+.|+.+++... . ...+ .... -..+. +|++....++++.
T Consensus 94 ~v~~l~~spdg~~lav~~~sg--s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~----~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS--EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA-GGMVI----DMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET--TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG-GGSEE----EEEECSSCTTEEE
T ss_pred cccEEEEcCCCCEEEEEEecc--CCCceEEEEEccccccCCcCCcceeeeeeccCCC-CCceE----EEEECCCCCCEEE
Confidence 5899999999888886 44 45678888876432 1 1111 1112 23466 7887776577887
Q ss_pred EeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCC
Q psy5768 105 SDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 164 (652)
Q Consensus 105 ~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~ 164 (652)
+-+..+.|.+.++............-..+..++..|...+|+... ....|...++.|.
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs--~dg~v~iwd~~~~ 224 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK--QNGTVVQYLPTLQ 224 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE--TTSCEEEECTTCC
T ss_pred EEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc--CCCcEEEEccCCc
Confidence 777788899998876533222222234688999999755665554 2456777777654
No 395
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=76.39 E-value=70 Score=32.49 Aligned_cols=69 Identities=7% Similarity=0.027 Sum_probs=43.1
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccC--CcceEEeeccCc----------------eeeeEEEccCCEEEEEeCC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNG--SNHRVLLERQGS----------------VEGLAYEYVHNYLYWTCNN 376 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g--~~~~~i~~~~~~----------------~~glAvDw~~~~LYwtd~~ 376 (652)
.+.+++|++....|..... +.|...++.. .....+. +-.. ...+++.+.++.| .+-+.
T Consensus 287 ~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~ 362 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQ-VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSY 362 (447)
T ss_dssp CEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEE-SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECS
T ss_pred eEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceee-ccccccccccccccccccccceEEEECCCCCEE-EEecc
Confidence 5678889886665555444 7777777653 2222222 1111 2238888887777 56566
Q ss_pred CCeEEEEEcCC
Q psy5768 377 DATINKIDLDS 387 (652)
Q Consensus 377 ~~~I~~~~~~~ 387 (652)
.+.|.+.++..
T Consensus 363 dg~v~iwd~~~ 373 (447)
T 3dw8_B 363 NNFFRMFDRNT 373 (447)
T ss_dssp TTEEEEEETTT
T ss_pred CCEEEEEEcCC
Confidence 78898888765
No 396
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=76.39 E-value=1.3 Score=32.84 Aligned_cols=40 Identities=25% Similarity=0.451 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCCCccccccCCCCceeeeccCceeeccCCcccC
Q psy5768 545 ACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 545 ~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
.+..+||.. +|.|..+.-....++++|.||.||.. .+|..
T Consensus 8 ~C~~~pC~n-gG~C~~~~~~~~~~~y~C~C~~Gf~G---~~Ce~ 47 (63)
T 1hae_A 8 EKEKTFCVN-GGECFMVKDLSNPSRYLCKCQPGFTG---ARCTE 47 (63)
T ss_dssp HHHHTTSCT-TCEEEEEESSSSSCCEEEECCTTEES---TTSCE
T ss_pred CCCCCcCCC-CcEEecCCccCCCCCEEEECCCCCcC---CccCc
Confidence 344578863 34454332112334799999999964 45653
No 397
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=75.86 E-value=2.7 Score=42.53 Aligned_cols=11 Identities=27% Similarity=0.528 Sum_probs=8.4
Q ss_pred eeeeccCceee
Q psy5768 570 VVCSCFTGKVL 580 (652)
Q Consensus 570 ~~C~Cp~g~~l 580 (652)
++|.|+.||..
T Consensus 165 ~~C~C~~G~~G 175 (324)
T 2ygq_A 165 RICECPDGFHG 175 (324)
T ss_dssp SCEECCTTEES
T ss_pred CeEECCCCCcC
Confidence 67888888765
No 398
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=75.69 E-value=64 Score=31.67 Aligned_cols=134 Identities=11% Similarity=0.062 Sum_probs=72.5
Q ss_pred EEEecCCCCeEEEEecCCCe--eEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCc-------
Q psy5768 3 IAVSSPTQSKIVVCNLEGEY--QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTK------- 73 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~------- 73 (652)
++++....+.|+++++.... ........ ..-..+.+|+++|....|.-.. ..+.|..+++....
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~----~h~~~v~~v~~sp~~~~las~s---~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDET----AHKKAIRSVAWRPHTSLLAAGS---FDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTT----CCCSCEEEEEECTTSSEEEEEE---TTSCEEEEEC-------CCCE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecC----CccCCEEEEEECCCCCEEEEEe---CCCcEEEEEcccCcCccccce
Confidence 34444566888899887532 12222111 0234789999999877776554 56778777764321
Q ss_pred cEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcC-C-C--cEEEEEeCCCCCceeEEEcCCCCeEEEEe
Q psy5768 74 RETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLT-G-Q--YRYVLISGGVDQPSALAVDPESGYLFWSE 149 (652)
Q Consensus 74 ~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~d-g-~--~~~~l~~~~~~~P~~iavd~~~g~lywtd 149 (652)
....+... ...+. ++++...+ ++..+-+..+.|.+.+++ + . .....+..-......++..|...+|.-..
T Consensus 99 ~~~~~~~h-~~~V~----~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 99 LLAIIEGH-ENEVK----GVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp EEEEEC-----CEE----EEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred eEEEEcCC-CCcEE----EEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEc
Confidence 11223333 34566 78887644 444554557788888873 2 1 12222333334577888888554544433
No 399
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=75.01 E-value=1.3 Score=32.89 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=21.0
Q ss_pred CCCCCCCCCCCcccce-ecCCCceEEEeCCccccCCCccc
Q psy5768 237 TNPCGVNNGGCAELCL-YNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 237 ~n~C~~~ng~Cs~lC~-~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
.+||.. +|.|..+.- ....+|+|.|+.||. |..|.
T Consensus 11 ~~pC~n-gG~C~~~~~~~~~~~y~C~C~~Gf~---G~~Ce 46 (63)
T 1hae_A 11 KTFCVN-GGECFMVKDLSNPSRYLCKCQPGFT---GARCT 46 (63)
T ss_dssp HTTSCT-TCEEEEEESSSSSCCEEEECCTTEE---STTSC
T ss_pred CCcCCC-CcEEecCCccCCCCCEEEECCCCCc---CCccC
Confidence 467753 243433211 134589999999983 66775
No 400
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=74.54 E-value=70 Score=36.35 Aligned_cols=175 Identities=10% Similarity=0.026 Sum_probs=94.7
Q ss_pred CCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCC-CEEEEEeccCC-c----ceEEEEEcCCCccEEEEeCCCc
Q psy5768 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVK-GKMFWSNVTKQ-V----VTIEMAFMDGTKRETVVSQKKY 83 (652)
Q Consensus 10 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~-~~lyw~d~~~~-~----~~I~~~~~dgs~~~~v~~~~~~ 83 (652)
.+.|++.+-.|+....+........-....+.+|++|+.+ +.||..- .. . ..|++..-.|...+.+...-..
T Consensus 36 ~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~--g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~ 113 (789)
T 1sqj_A 36 IGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ--GRYVGDEWAAFYVSEDRGQSFTIYESPFPM 113 (789)
T ss_dssp SSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE--CSCTTSSCCEEEEESSTTSEEEEEECSSCC
T ss_pred CCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe--CccCCCcccEEEEECCCCCcceeccCCccc
Confidence 4567777777777766432110000023568999999854 6677754 22 2 6788876667766665321101
Q ss_pred C-------CccCCCCcEEEEccCC-cEEEEeCCCCEEEEEEcCCC-cEEEEEeC----CCCCceeEEEcCCCC-eEEEEe
Q psy5768 84 P-------AVTACNLHIAVDWIAQ-NIYWSDPKENVIEVARLTGQ-YRYVLISG----GVDQPSALAVDPESG-YLFWSE 149 (652)
Q Consensus 84 ~-------~p~~~~~~lavDw~~~-~lY~~d~~~~~I~v~~~dg~-~~~~l~~~----~~~~P~~iavd~~~g-~lywtd 149 (652)
. ... .|++|.... ++|.. .....|.+.+-.|+ ..++.... .-.....|++||.++ .||..-
T Consensus 114 ~~~~~~~~~~~----~iav~p~~~~~v~~g-~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 114 GANDMGRNNGE----RLAVNPFNSNEVWMG-TRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp CTTSTTTTSCC----CEEEETTEEEEEEEE-CSSSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEE
T ss_pred CccCCCcccee----EEEEcCCCCCEEEEE-eccCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEE
Confidence 1 134 799997654 45554 33456776644454 33321100 002235788898654 777765
Q ss_pred cCCCCeEEEEeCCCCCcEEEEeec--c---------------cCceeEEEeccCCEEEEE
Q psy5768 150 SGKIPLIARAGLDGKKQTILAQEI--I---------------MPIKDITLDLKFFSAFYR 192 (652)
Q Consensus 150 ~~~~~~I~~~~ldg~~~~~~~~~~--~---------------~~p~gl~lD~~~~~ly~~ 192 (652)
... ..|.+..=.|..-..+.... . ..|..+++++..++||.+
T Consensus 189 ~~~-~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 247 (789)
T 1sqj_A 189 TAP-QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVT 247 (789)
T ss_dssp SST-TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEE
T ss_pred cCC-CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEE
Confidence 421 46666543344433322100 0 123778888877777775
No 401
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=73.03 E-value=1.5 Score=41.04 Aligned_cols=22 Identities=23% Similarity=0.575 Sum_probs=18.2
Q ss_pred CCCCCCCCeeecC--CCCcccCCC
Q psy5768 630 AMRDCRPGYFKCD--NNKCILSSH 651 (652)
Q Consensus 630 ~~~~C~~~~f~C~--~~~Ci~~~~ 651 (652)
....|++++|+|. +|+|||.+|
T Consensus 49 ~~~~C~~~eFqC~~~~g~CIp~~w 72 (220)
T 2gtl_N 49 EGTHCEKRTFQCGGNEQECISDLL 72 (220)
T ss_dssp HCCSSCTTEEECCSSSCCEEETTT
T ss_pred CCCCCCCCccCcCCCCCcEeCcce
Confidence 3457899999994 689999887
No 402
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=72.94 E-value=1.3 Score=43.97 Aligned_cols=38 Identities=26% Similarity=0.632 Sum_probs=28.7
Q ss_pred CCCCCCCC---CCcccceecCCCceEEEeCCc-cccCCCccc
Q psy5768 238 NPCGVNNG---GCAELCLYNGVSAVCACAHGV-VAQDGKSCS 275 (652)
Q Consensus 238 n~C~~~ng---~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~ 275 (652)
++|...++ .|+|.|....++|.|.|..|| |..++++|.
T Consensus 121 ~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 121 DECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCcc
Confidence 56765443 599999988878999999998 667888886
No 403
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=72.07 E-value=1.6 Score=43.06 Aligned_cols=38 Identities=21% Similarity=0.576 Sum_probs=29.5
Q ss_pred CCCCCCC---CCCcccceecCCCceEEEeCCc-cccCCCccc
Q psy5768 238 NPCGVNN---GGCAELCLYNGVSAVCACAHGV-VAQDGKSCS 275 (652)
Q Consensus 238 n~C~~~n---g~Cs~lC~~~~~~~~C~C~~G~-l~~dg~~C~ 275 (652)
++|.... .+|+|.|.....++.|.|..|| +..|++.|.
T Consensus 122 ~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 122 DECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 5565443 4899999987778999999998 556888886
No 404
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=71.10 E-value=97 Score=31.75 Aligned_cols=100 Identities=8% Similarity=0.023 Sum_probs=60.5
Q ss_pred EEecCCCCeEEEEecCCC-eeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCC
Q psy5768 4 AVSSPTQSKIVVCNLEGE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKK 82 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~ 82 (652)
+++....+.|.++|+... ....+.. .-..+.++++.+.+ .|+-.. ..+.|..+++........+...
T Consensus 135 l~sgs~dg~i~vwd~~~~~~~~~~~~-------h~~~V~~l~~~~~~-~l~s~s---~dg~i~vwd~~~~~~~~~~~~h- 202 (464)
T 3v7d_B 135 VITGADDKMIRVYDSINKKFLLQLSG-------HDGGVWALKYAHGG-ILVSGS---TDRTVRVWDIKKGCCTHVFEGH- 202 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC-------CSSCEEEEEECSTT-EEEEEE---TTSCEEEEETTTTEEEEEECCC-
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEeC-------CCcCEEEEEEcCCC-EEEEEe---CCCCEEEEECCCCcEEEEECCC-
Confidence 444456788999997644 4444443 23578999998654 555444 6788999998755433334434
Q ss_pred cCCccCCCCcEEEEcc-CCcEEEEeCCCCEEEEEEcCC
Q psy5768 83 YPAVTACNLHIAVDWI-AQNIYWSDPKENVIEVARLTG 119 (652)
Q Consensus 83 ~~~p~~~~~~lavDw~-~~~lY~~d~~~~~I~v~~~dg 119 (652)
...+. .+++.+. .+++.++-+..+.|.+.++..
T Consensus 203 ~~~v~----~l~~~~~~~~~~l~s~s~d~~i~vwd~~~ 236 (464)
T 3v7d_B 203 NSTVR----CLDIVEYKNIKYIVTGSRDNTLHVWKLPK 236 (464)
T ss_dssp SSCEE----EEEEEESSSCEEEEEEETTSCEEEEECCC
T ss_pred CCccE----EEEEecCCCCCEEEEEcCCCcEEEeeCCC
Confidence 45566 6777652 334445544566666666654
No 405
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=70.22 E-value=2.9 Score=33.50 Aligned_cols=51 Identities=22% Similarity=0.501 Sum_probs=30.7
Q ss_pred cccCCCCceeeeccCceeeccCCccc-CcccccCCCceeecc-CeecCC----ccCCCCCCCCCCCCCC
Q psy5768 562 CKLDETGQVVCSCFTGKVLMEDNRSC-TINTVCSEHDFKCSD-GMCIPF----NQTCDRVYNCHDKSDE 624 (652)
Q Consensus 562 Cl~~~~~~~~C~Cp~g~~l~~d~~C~-~~~~~C~~~~f~C~~-g~Ci~~----~~~Cd~~~dC~d~sde 624 (652)
|+..+ +.++|.|+.||. .|. .....|.++ .|.| |.|+.. .+.| .|+.|...
T Consensus 25 C~n~~-~~y~C~C~~G~~-----~C~~~~~~~C~~~--pC~ngg~C~~~~~~~~~~C----~C~~G~~G 81 (91)
T 1tpg_A 25 VLRSN-RVEYCWCNSGRA-----QCHSVPVKSCSEP--RCFNGGTCQQALYFSDFVC----QCPEGFAG 81 (91)
T ss_dssp CSSSS-CEEEEECSSSCC-----BCCEECEEECSSC--CSCTTCEEEEESSSSCEEE----ECCTTCBS
T ss_pred cccCC-CCcEeECCCCCc-----ccccCcCCcccCC--CCCCCCEeecCCCCCCeEe----ECCCCCcC
Confidence 44333 379999999996 464 223456543 3776 588853 3445 46666543
No 406
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=69.64 E-value=2.1 Score=27.02 Aligned_cols=23 Identities=17% Similarity=0.345 Sum_probs=17.5
Q ss_pred eeeccCceeeccCCcccCcccccC
Q psy5768 571 VCSCFTGKVLMEDNRSCTINTVCS 594 (652)
Q Consensus 571 ~C~Cp~g~~l~~d~~C~~~~~~C~ 594 (652)
-|.|++||+...++.|++ ...|.
T Consensus 6 GC~C~~G~vrn~~G~CV~-~~~Cp 28 (32)
T 3ssb_I 6 KCYCEDGYARDVNGKCIP-IKDCP 28 (32)
T ss_dssp EEEECTTEEECTTSCEEE-GGGCC
T ss_pred CCCcCCCcEECCCCCEEC-HHHCc
Confidence 499999999876678986 44553
No 407
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=67.85 E-value=1.1e+02 Score=31.23 Aligned_cols=202 Identities=9% Similarity=-0.012 Sum_probs=110.7
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEe-eccCceeeeEEEcc-CCEEEEEeCCCCeEEEEEcCCCCC
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLL-ERQGSVEGLAYEYV-HNYLYWTCNNDATINKIDLDSPKA 390 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~-~~~~~~~glAvDw~-~~~LYwtd~~~~~I~~~~~~~~~~ 390 (652)
...+.+++|.+.. ++.+-...+.|...+++.......+ .....+..+++.+. .+.+..+-...+.|.+.++.....
T Consensus 162 ~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 239 (464)
T 3v7d_B 162 DGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS 239 (464)
T ss_dssp SSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCC
T ss_pred CcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcc
Confidence 3557788886544 4555555688888887654333333 34456778888763 446666667778888888765321
Q ss_pred ccE-------------------EEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCce
Q psy5768 391 QRI-------------------VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNA 451 (652)
Q Consensus 391 ~~~-------------------~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~g 451 (652)
... .+... ......-.++.+...+|+..... +.|...++........+...-.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~ 315 (464)
T 3v7d_B 240 VPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMASVRTVSGHGNIVVSGSYD---NTLIVWDVAQMKCLYILSGHTDRIYS 315 (464)
T ss_dssp C------CCSSEEESCGGGCTTEEEEE-CCCSSCEEEEEEETTEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred cccccccCCcceEeeccCCCeEEEEEc-cCccceEEEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEEecCCCCCEEE
Confidence 100 01111 11112223345545556555433 25555555432222222222334568
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEEeCCEEEEEcCCCCeEEEEEccCCce
Q psy5768 452 LALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEE 522 (652)
Q Consensus 452 laiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~~~~lYwtd~~~~~I~~~~k~~g~~ 522 (652)
+++++.++.|+-+. ..+.|...++........+........++++.+++|+... ..+.|..-+..++..
T Consensus 316 ~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s-~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 316 TIYDHERKRCISAS-MDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAA-ADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEETTTTEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEE-TTSEEEEEETTTCCE
T ss_pred EEEcCCCCEEEEEe-CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEe-CCCcEEEEECCCCce
Confidence 99998877777654 4467888888654443333333344566666665555443 455666666655543
No 408
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=66.35 E-value=1.2e+02 Score=30.95 Aligned_cols=136 Identities=6% Similarity=-0.025 Sum_probs=73.4
Q ss_pred eEEEEECCCCEEEEEeccCCcceEEEEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCC
Q psy5768 41 SSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQ 120 (652)
Q Consensus 41 ~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~ 120 (652)
..++++ +++|+-.. ..+.|+.+++........+... ...+. .++++ +++.++-+..+.|.+.+++..
T Consensus 123 ~~~~~~--g~~l~sg~---~dg~i~vwd~~~~~~~~~~~~h-~~~v~----~~~~~---~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 123 TCLQFC--GNRIVSGS---DDNTLKVWSAVTGKCLRTLVGH-TGGVW----SSQMR---DNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEEEEE--TTEEEEEE---TTSCEEEEETTTCCEEEECCCC-SSCEE----EEEEE---TTEEEEEETTSCEEEEETTTT
T ss_pred EEEEEc--CCEEEEEE---CCCcEEEEECCCCcEEEEEcCC-CCCEE----EEEec---CCEEEEEeCCCeEEEEECCcC
Confidence 445554 66776555 5788988988644333333333 34455 66665 455566666788999988755
Q ss_pred cEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCC
Q psy5768 121 YRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLS 195 (652)
Q Consensus 121 ~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~ 195 (652)
.....+.........++.++ .+|+... ....|...++........+.........+++ .++.|+....+
T Consensus 190 ~~~~~~~~h~~~v~~~~~~~--~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLHE--KRVVSGS--RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp EEEEEECCCSSCEEEEEEET--TEEEEEE--TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT
T ss_pred cEEEEECCCCCcEEEEEecC--CEEEEEe--CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC
Confidence 44333333334556677753 4555443 2456766666543333222222234445554 34444444444
No 409
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=65.88 E-value=96 Score=29.70 Aligned_cols=160 Identities=13% Similarity=0.143 Sum_probs=81.3
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcc---eEEeeccCceeeeEEEcc-CCEEEEEeCCCCeEEEEEcCCCC
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNH---RVLLERQGSVEGLAYEYV-HNYLYWTCNNDATINKIDLDSPK 389 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~---~~i~~~~~~~~glAvDw~-~~~LYwtd~~~~~I~~~~~~~~~ 389 (652)
..+.+++|++..++|.-. ...+.|...++++... .++......+..|++... .+++..+-+..++|.+-++....
T Consensus 10 ~~V~~~~~s~~g~~las~-s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATC-SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECTTSSEEEEE-ETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECCCCCEEEEE-eCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 346778888776655544 4457777777764321 222233345667777542 24555666677888888875421
Q ss_pred CccEEEEEe-CCCCCceEEEEeCCC-CEEEEEecCCCCCceEEEeecCCC--ceEEEEcCCCCCceEEEecCC-------
Q psy5768 390 AQRIVVVRL-GQHDKPRGIDIDSCD-SRIYWTNWNSHLPSIQRAFFSGFG--TESIITTDITMPNALALDHQA------- 458 (652)
Q Consensus 390 ~~~~~~~~~-~~~~~P~~Iavdp~~-g~Lywtd~~~~~~~I~r~~ldG~~--~~~l~~~~l~~P~glaiD~~~------- 458 (652)
...+... .......+++++|.. |.++.+-... ..|....+.... ........-...+.+++.+..
T Consensus 89 --~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 89 --WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp --BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred --eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--CcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 1111111 233567889999862 4444433222 255555554322 112222222234556665542
Q ss_pred -----CEEEEEeCCCCeEEEEecCC
Q psy5768 459 -----EKLFWGDARLDKIERCDYDG 478 (652)
Q Consensus 459 -----~~LYw~D~~~~~I~~~~ldG 478 (652)
++++.+-...+.|...+++.
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEET
T ss_pred CCCCCcceEEEEcCCCcEEEEEEcC
Confidence 23344433445566666654
No 410
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=65.63 E-value=1.8 Score=30.84 Aligned_cols=18 Identities=28% Similarity=0.602 Sum_probs=14.0
Q ss_pred CCCceEEEeCCccccCCCccc
Q psy5768 255 GVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 255 ~~~~~C~C~~G~l~~dg~~C~ 275 (652)
..+|+|.|+.|| .|..|.
T Consensus 26 ~~~~~C~C~~Gy---tG~~Ce 43 (53)
T 1nql_B 26 LDKYACNCVVGY---IGERCQ 43 (53)
T ss_dssp TTEEEEEECTTE---ESTTSC
T ss_pred CCCEEEecCCCC---cCCCCC
Confidence 347999999998 366675
No 411
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=64.80 E-value=3.7 Score=44.81 Aligned_cols=18 Identities=22% Similarity=0.770 Sum_probs=14.9
Q ss_pred CCCCCeeecC-CCCcccCCC
Q psy5768 633 DCRPGYFKCD-NNKCILSSH 651 (652)
Q Consensus 633 ~C~~~~f~C~-~~~Ci~~~~ 651 (652)
.|. ++|+|. ||+||+.+|
T Consensus 65 ~c~-~~f~C~~~g~Ci~~~~ 83 (554)
T 3ojy_A 65 QCG-QDFQCKETGRCLKRHL 83 (554)
T ss_dssp CCS-SSEECSSSCCEECGGG
T ss_pred CCC-CcCccCCCCEEccccc
Confidence 464 799999 999999875
No 412
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=63.38 E-value=1.3e+02 Score=30.31 Aligned_cols=60 Identities=10% Similarity=-0.011 Sum_probs=40.5
Q ss_pred EEEecCCCCeEEEEecC-CCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCC
Q psy5768 3 IAVSSPTQSKIVVCNLE-GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 71 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dg 71 (652)
++++-.....|+++|+. +.....+.... ..+.+|+|+|.+..++.+- ...+.|..+++..
T Consensus 158 ~las~s~D~tv~~Wd~~~~~~~~~~~~~~-------~~v~~v~~~p~~~~~l~~~--~~d~~v~~wd~~t 218 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLTDEGPILAGYPLS-------SPGISVQFRPSNPNQLIVG--ERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEEECS-------SCEEEEEEETTEEEEEEEE--ETTSEEEEEETTC
T ss_pred EEEEEECCCeEEEEECCCCceeeeecCCC-------CCcEEEEECCCCCceEEec--CCCCEEEEEECCC
Confidence 45555567889999975 44444444422 4678999999877666655 4677888887653
No 413
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=61.98 E-value=3.6 Score=40.45 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=27.1
Q ss_pred CCCccccccCCCCceeeeccCceeeccC-CcccC
Q psy5768 556 GNCDDICKLDETGQVVCSCFTGKVLMED-NRSCT 588 (652)
Q Consensus 556 g~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~~ 588 (652)
..|+|.|....+ ++.|.|+.||.|..| ..|..
T Consensus 132 ~~c~~~C~n~~g-~~~C~C~~Gy~l~~d~~~C~~ 164 (278)
T 3dem_A 132 LSCDHYCHNYIG-GYYCSCRFGYILHTDNRTCRV 164 (278)
T ss_dssp CCCSSEEEEETT-EEEEECCTTCEECTTSSCEEC
T ss_pred ccCCcCcCCccC-CcEEEeCCcceeccCCCCCcc
Confidence 479999997665 699999999999988 77863
No 414
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=61.46 E-value=4.5 Score=45.33 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=20.9
Q ss_pred eeeeccCceeeccCCccc--CcccccCCC-ceeecc-CeecC
Q psy5768 570 VVCSCFTGKVLMEDNRSC--TINTVCSEH-DFKCSD-GMCIP 607 (652)
Q Consensus 570 ~~C~Cp~g~~l~~d~~C~--~~~~~C~~~-~f~C~~-g~Ci~ 607 (652)
++|.|+.||... .|. .....|.+. ...|.+ |.|+.
T Consensus 545 g~C~C~~Gy~G~---~CeC~~~~~~C~~~~g~~C~~~G~C~~ 583 (690)
T 3fcs_B 545 GDCLCDSDWTGY---YCNCTTRTDTCMSSNGLLCSGRGKCEC 583 (690)
T ss_dssp TEEEECTTEESS---SSCEECCCTTTBCTTSSBTSSSCEEET
T ss_pred CeeECcCCCcCC---CCccCCCCCcccCCCCCCCCCCCEEeC
Confidence 689999999753 344 223456432 245664 57764
No 415
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=61.13 E-value=1.7e+02 Score=32.71 Aligned_cols=147 Identities=16% Similarity=0.079 Sum_probs=81.7
Q ss_pred CCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECC-CCEEEEEeccCC--------cceEEEEEcCCCccEEEEeC
Q psy5768 10 QSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPV-KGKMFWSNVTKQ--------VVTIEMAFMDGTKRETVVSQ 80 (652)
Q Consensus 10 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~-~~~lyw~d~~~~--------~~~I~~~~~dgs~~~~v~~~ 80 (652)
.+.|++++-.|+....+....+...-....+.+|++||. .++||..- .. ...|+|..-.|...+.+...
T Consensus 44 ~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~--~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~ 121 (737)
T 2cn3_A 44 IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA--GMYTNDWLPNMGAILRSTDRGETWEKTILP 121 (737)
T ss_dssp SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE--CSCSSSSSCCCCEEEEESSSSSSCEEEECS
T ss_pred CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe--cccccccccCCccEEEeCCCCCCcccCCCC
Confidence 467888887788776654311100001345889999994 57899864 21 35788877667766665432
Q ss_pred CCcC-------CccCCCCcEEEEccC-CcEEEEeCCCCEEEEEEcCCC-cEEEEEeCCCC------------------Cc
Q psy5768 81 KKYP-------AVTACNLHIAVDWIA-QNIYWSDPKENVIEVARLTGQ-YRYVLISGGVD------------------QP 133 (652)
Q Consensus 81 ~~~~-------~p~~~~~~lavDw~~-~~lY~~d~~~~~I~v~~~dg~-~~~~l~~~~~~------------------~P 133 (652)
.... ... .|++|+.. +.||........|.+..-.|. ..++ .. +. --
T Consensus 122 ~~~~~~~~g~~~~~----~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~--~~-~~~~~~~~~~p~~~~~~~~~g~ 194 (737)
T 2cn3_A 122 FKMGGNMPGRSMGE----RLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKV--ES-FPNPGTYIYDPNFDYTKDIIGV 194 (737)
T ss_dssp SCCCTTSTTTTSCC----CEEECSSCTTCEEEECSTTCCEEEESSTTSSCEEC--TT-CCCCCCCBSCTTSTTTCSBCCE
T ss_pred cccCCCcCcccccc----eEEECCCCCCEEEEeeccCCcEEEeCCCCcceecc--cC-CCCCcccccCcccccccCCCCE
Confidence 1011 124 89999875 566665422145665544443 3322 11 11 12
Q ss_pred eeEEEcCCC-------CeEEEEecCCCCeEEEEeCCCCC
Q psy5768 134 SALAVDPES-------GYLFWSESGKIPLIARAGLDGKK 165 (652)
Q Consensus 134 ~~iavd~~~-------g~lywtd~~~~~~I~~~~ldg~~ 165 (652)
..+++||.+ +.||.+-......|.|..=.|..
T Consensus 195 ~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~t 233 (737)
T 2cn3_A 195 VWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVT 233 (737)
T ss_dssp EEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSC
T ss_pred EEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCc
Confidence 348888854 37888754333357776433443
No 416
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=60.53 E-value=4.3 Score=44.15 Aligned_cols=15 Identities=20% Similarity=0.547 Sum_probs=13.5
Q ss_pred CeeecC-CCCcccCCC
Q psy5768 637 GYFKCD-NNKCILSSH 651 (652)
Q Consensus 637 ~~f~C~-~~~Ci~~~~ 651 (652)
++|+|. ||+||+.+|
T Consensus 69 ~~f~C~~~g~Ci~~~~ 84 (537)
T 3ojy_B 69 EGFVCAQTGRCVNRRL 84 (537)
T ss_dssp SSEECTTTCCEECGGG
T ss_pred CccCcCCCCcEeeccc
Confidence 799999 999999876
No 417
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=60.25 E-value=2.7 Score=29.72 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=18.1
Q ss_pred CCCCCCCCCCCccccccCCCCceeeeccCceee
Q psy5768 548 KTPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 548 ~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l 580 (652)
.+||.. .|.|..+=. ...++++|.||.||..
T Consensus 13 ~~pC~N-GGtC~~~~~-~~~~~y~C~C~~Gf~G 43 (52)
T 3ca7_A 13 AWYCLN-DAHCFAVKI-ADLPVYSCECAIGFMG 43 (52)
T ss_dssp HHTSCT-TCEEEEEEE-TTEEEEEEECCTTEES
T ss_pred CCcCCC-CCEEecCcc-CCCCCEEEECCCCCcC
Confidence 368862 234543110 1123699999999975
No 418
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=60.19 E-value=1.4e+02 Score=29.57 Aligned_cols=101 Identities=10% Similarity=-0.031 Sum_probs=62.8
Q ss_pred EEEe-cCCCCeEEEEecCCCe-----------------eEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcce-
Q psy5768 3 IAVS-SPTQSKIVVCNLEGEY-----------------QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVT- 63 (652)
Q Consensus 3 i~v~-~~~~~~I~~~~~~g~~-----------------~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~- 63 (652)
++++ ....+.|+++|+.... ...+.. .-..+.+|+++|.+..|.-.. ..++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-------h~~~v~~~~~s~~g~~l~s~s---~d~~~ 219 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-------HTNPIKMVRLNRKSDMVATCS---QDGTI 219 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECC-------CSSCEEEEEECTTSSEEEEEE---TTCSE
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-------cCCceEEEEECCCCCEEEEEe---CCCCE
Confidence 4444 4567889999988643 333433 235789999999766665444 5676
Q ss_pred EEEEEcCC-CccEEEEeC-CCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCC
Q psy5768 64 IEMAFMDG-TKRETVVSQ-KKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTG 119 (652)
Q Consensus 64 I~~~~~dg-s~~~~v~~~-~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg 119 (652)
|..+++.. ....++-.. . ...+. .+++...++ +..+-+..+.|.+.++..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h-~~~v~----~~~~s~~~~-~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLD-RADVV----DMKWSTDGS-KLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEETTTCCEEEEEECTTC-CSCEE----EEEECTTSC-EEEEEETTCEEEEEESSC
T ss_pred EEEEECCCCcEEEEEEcCCC-CCcEE----EEEECCCCC-EEEEEECCCEEEEEEccC
Confidence 88888874 433443312 3 44566 888887444 444445567888888753
No 419
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=59.96 E-value=4 Score=40.42 Aligned_cols=30 Identities=27% Similarity=0.603 Sum_probs=25.8
Q ss_pred CCccccccCCCCceeeeccCceeeccC-Cccc
Q psy5768 557 NCDDICKLDETGQVVCSCFTGKVLMED-NRSC 587 (652)
Q Consensus 557 ~Cs~lCl~~~~~~~~C~Cp~g~~l~~d-~~C~ 587 (652)
.|+|.|....+ ++.|.|..||.|..+ .+|.
T Consensus 132 ~c~~~C~n~~g-~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 132 PCDHYCHXYLG-GYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CCSSEEEEETT-EEEEECCTTEEECTTSSCEE
T ss_pred cCCCccccccC-ceEeecCCCceeccCCCCcc
Confidence 59999997765 699999999999988 7775
No 420
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=59.95 E-value=18 Score=40.46 Aligned_cols=30 Identities=23% Similarity=0.548 Sum_probs=17.7
Q ss_pred CCCCCCCCCCCCCCccccccCCCCcee---eeccCceee
Q psy5768 545 ACAKTPCRHLNGNCDDICKLDETGQVV---CSCFTGKVL 580 (652)
Q Consensus 545 ~~~~~~C~~~ng~Cs~lCl~~~~~~~~---C~Cp~g~~l 580 (652)
.|..+||.. .+.|+. ..|.+. |.|+.||..
T Consensus 436 ~C~~~pc~n-~~~C~~-----g~G~~~~G~C~C~~Gy~G 468 (690)
T 3fcs_B 436 ACQAQAEPN-SHRCNN-----GNGTFECGVCRCGPGWLG 468 (690)
T ss_dssp GGGTTCCTT-CTTTTT-----TSEEEETTEEEECTTCCS
T ss_pred CCcCCCCCC-CCcccC-----CCCeEeCCceEeCCCccC
Confidence 455567752 244541 233455 999999864
No 421
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=59.93 E-value=1.5 Score=43.12 Aligned_cols=39 Identities=15% Similarity=0.399 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCcc--ccccCCCCceeeeccCceeeccCCcccC
Q psy5768 548 KTPCRHLNGNCDD--ICKLDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 548 ~~~C~~~ng~Cs~--lCl~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
.+.|....+.|+. .|..+++ +|.|.|+.||.. +..+|.+
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~G-sy~C~C~~Gy~G-nG~~C~d 45 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYAT-GFCCRCVANYTG-NGRQCVA 45 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSS-CEEEEECTTEEE-CSSSEEE
T ss_pred chhccCCCCCCCCCCEeEcCCC-CeEEEcCCCCCC-CCCcCCC
Confidence 3667654566753 5988776 699999999974 2378876
No 422
>2nx7_A Nematocyst outer WALL antigen; cysteine rich, disulfide bonds, rich in turns, structural protein; NMR {Hydra vulgaris}
Probab=59.80 E-value=1.2 Score=25.59 Aligned_cols=18 Identities=22% Similarity=0.687 Sum_probs=14.9
Q ss_pred CCCCCCCCCCCccccccC
Q psy5768 548 KTPCRHLNGNCDDICKLD 565 (652)
Q Consensus 548 ~~~C~~~ng~Cs~lCl~~ 565 (652)
.|||+....||+..|.|.
T Consensus 2 qnpcslqqpgcssacapa 19 (28)
T 2nx7_A 2 QNPCSLQQPGCSSACAPA 19 (28)
T ss_dssp CCTHHHHSTTCCGGGTTT
T ss_pred CCCccccCCCccccccch
Confidence 489988888999988764
No 423
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=59.67 E-value=4.5 Score=32.34 Aligned_cols=23 Identities=39% Similarity=0.817 Sum_probs=18.1
Q ss_pred cceecC--CCceEEEeCCccccCCCccc
Q psy5768 250 LCLYNG--VSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~~~~--~~~~C~C~~G~l~~dg~~C~ 275 (652)
.|+... .+|+|.|+.|| .|+.|.
T Consensus 61 ~C~~~~~~~~~~C~C~~G~---~G~~Ce 85 (91)
T 1tpg_A 61 TCQQALYFSDFVCQCPEGF---AGKSCE 85 (91)
T ss_dssp EEEEESSSSCEEEECCTTC---BSSSCC
T ss_pred EeecCCCCCCeEeECCCCC---cCCcCC
Confidence 588665 68999999998 366775
No 424
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=59.67 E-value=1.7e+02 Score=31.74 Aligned_cols=122 Identities=5% Similarity=0.062 Sum_probs=75.2
Q ss_pred CCCeEEEEecCCCe--------eEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCccE----E
Q psy5768 9 TQSKIVVCNLEGEY--------QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRE----T 76 (652)
Q Consensus 9 ~~~~I~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~~----~ 76 (652)
..+.|.++++.+.. ..++.... .+....+..|++.|.. + .+- ...+.|+.+++++.... +
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---~gh~~~V~sVawSPdg--L-aas--s~D~tVrlWd~~~~~~~~~~~t 220 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSD---AGSKDWVTHIVWYEDV--L-VAA--LSNNSVFSMTVSASSHQPVSRM 220 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSC---TTCCCCEEEEEEETTE--E-EEE--ETTCCEEEECCCSSSSCCCEEE
T ss_pred CCCEEEEEECCCCccccccceeeeeeeccc---ccccccEEEEEEcCCc--E-EEE--eCCCeEEEEECCCCccccceee
Confidence 46778888888763 24443211 1134689999999865 3 344 46789999999887632 2
Q ss_pred EEeCCCcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEE--cCCCCeEEEE
Q psy5768 77 VVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAV--DPESGYLFWS 148 (652)
Q Consensus 77 v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iav--d~~~g~lywt 148 (652)
+-... -..+. ++|+- + +...+-. .+.|..-+.++....++..+-.....++++ .| +|....+
T Consensus 221 L~~~h-~~~V~----svaFs--g-~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~ 284 (588)
T 2j04_A 221 IQNAS-RRKIT----DLKIV--D-YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK-ESTILLM 284 (588)
T ss_dssp EECCC-SSCCC----CEEEE--T-TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS-SCEEEEE
T ss_pred ecccc-cCcEE----EEEEE--C-CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC-CCCEEEE
Confidence 32222 23466 66664 3 4434333 589999999987775555454566778888 65 4544333
No 425
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=57.23 E-value=4.4 Score=44.36 Aligned_cols=37 Identities=30% Similarity=0.672 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCceeeecc-CceeeccCCcccC
Q psy5768 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCF-TGKVLMEDNRSCT 588 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp-~g~~l~~d~~C~~ 588 (652)
.+|..+||.. .|.| .....++|+|.|+ .||.. +.|..
T Consensus 2 d~C~s~PC~n-gG~C----~~~~~~~y~C~C~~~G~~G---~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQN-RGEC----MSTGFDQYKCDCTRTGFYG---ENCTT 39 (587)
T ss_dssp CTTTTCCCCT-TCEE----EEEETTEEEEECTTSSEET---TTTCE
T ss_pred CCCCCCCCCC-CCEe----eCCCCCCeEEecCCCCccC---CCCCC
Confidence 3577889973 2335 4333347999999 99964 46764
No 426
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=57.10 E-value=2.3e+02 Score=31.29 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=32.0
Q ss_pred CeEEEEecCCCc-eEEEecCCCCcee-EEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 469 DKIERCDYDGTN-RIVLSKISPLHPF-DMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 469 ~~I~~~~ldG~~-~~~l~~~~~~~p~-glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
+.|..+|+.... +-.+-. ...... .++..++.||... ..+.++.+|..||+.+-.+.
T Consensus 455 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagglvf~gt-~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPY-VTIFNGGTLSTAGNLVFEGS-ADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEECCCCCeEeEccC-CCCccCccceECCCEEEEEC-CCCcEEEEECCCCccceeee
Confidence 457777775333 222211 111112 2344567777764 56788888888888765554
No 427
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=57.08 E-value=2.4e+02 Score=31.38 Aligned_cols=174 Identities=13% Similarity=0.024 Sum_probs=89.7
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCC----ccEE--
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT----KRET-- 76 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs----~~~~-- 76 (652)
|.|++ .++|.+++........+.............+.+|..| .++.|++.- ..+.+.+++.... ....
T Consensus 386 lWigt--~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d-~~g~lWigT---~~~Gl~~~~~~~~~~~~~~~~~~ 459 (758)
T 3ott_A 386 LWIAT--DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFED-TAGQLWIST---CLGGIFVVDKHKLMQSTSGQYIA 459 (758)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEEC-TTSEEEEEE---SSSCEEEEEHHHHHHCCSSEEEC
T ss_pred EEEEe--CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEc-CCCCEEEEE---CCCceEEEccccccccCCcceec
Confidence 45554 3588888887665544432111111122456778777 458887765 2356777775420 0111
Q ss_pred --EEe--CCCcC--CccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcEEEEEeCCC---CCceeEEEcCCCCeEEE
Q psy5768 77 --VVS--QKKYP--AVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV---DQPSALAVDPESGYLFW 147 (652)
Q Consensus 77 --v~~--~~~~~--~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~~~l~~~~~---~~P~~iavd~~~g~lyw 147 (652)
.+. .+ +. .+. .|+.|. .++|+++.+..+-|.+.+++....+.+....+ ..+..|..|. +|.|++
T Consensus 460 ~~~~~~~~~-l~~~~i~----~i~~d~-~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~lWi 532 (758)
T 3ott_A 460 EQNYSVHNG-LSGMFIN----QIIPDN-EGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDE-DGLLWV 532 (758)
T ss_dssp SEEECGGGT-CSCSCEE----EEEECT-TSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECT-TSCEEE
T ss_pred ccccccccc-cccceee----eEEEcC-CCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECC-CCCEEE
Confidence 111 12 21 244 778884 56665533334568888876544333322222 3577899995 789987
Q ss_pred EecCCCCeEEEEeCCCCCcEEEEeecc--cCceeEEEeccCCEEEEEeC
Q psy5768 148 SESGKIPLIARAGLDGKKQTILAQEII--MPIKDITLDLKFFSAFYRNL 194 (652)
Q Consensus 148 td~~~~~~I~~~~ldg~~~~~~~~~~~--~~p~gl~lD~~~~~ly~~d~ 194 (652)
+.. ..|.+.+........+...++ ..+.+|.-| .++|++...
T Consensus 533 gt~---~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~--~g~lWi~t~ 576 (758)
T 3ott_A 533 GFH---GGVMRINPKDESQQSISFGSFSNNEILSMTCV--KNSIWVSTT 576 (758)
T ss_dssp EET---TEEEEECC--CCCCBCCCCC---CCEEEEEEE--TTEEEEEES
T ss_pred Eec---CceEEEecCCCceEEecccCCCccceEEEEEC--CCCEEEECC
Confidence 743 368887765433222211111 234555543 566655443
No 428
>1ata_A Ascaris trypsin inhibitor; proteinase inhibitor(trypsin); NMR {Ascaris suum} SCOP: g.22.1.1 PDB: 1atb_A 1atd_A 1ate_A
Probab=56.95 E-value=9.4 Score=28.10 Aligned_cols=37 Identities=24% Similarity=0.493 Sum_probs=24.0
Q ss_pred CCCCCCCCccccccCCCCceeeecc--CceeeccCCcccCccccc
Q psy5768 551 CRHLNGNCDDICKLDETGQVVCSCF--TGKVLMEDNRSCTINTVC 593 (652)
Q Consensus 551 C~~~ng~Cs~lCl~~~~~~~~C~Cp--~g~~l~~d~~C~~~~~~C 593 (652)
|...+..|...|. ...|.|+ .||++..++.|++ ...|
T Consensus 22 C~~~~~~C~~~C~-----~~gC~C~~~~G~vr~~~g~CV~-~~~C 60 (62)
T 1ata_A 22 CAQKIVPCTRECK-----PPRCECIASAGFVRDAQGNCIK-FEDC 60 (62)
T ss_dssp SSCSSCCCSCCCC-----CSEEECCTTTTEEEETTTEEEE-STTS
T ss_pred cCcCCCCCcCccC-----CCCcCcCCCCCeEECCCCCEEC-HHHC
Confidence 4433444555554 1359999 9999976678886 4445
No 429
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=56.91 E-value=2.1e+02 Score=30.77 Aligned_cols=17 Identities=12% Similarity=-0.130 Sum_probs=14.2
Q ss_pred eEEEEeCCCCEEEEEec
Q psy5768 405 RGIDIDSCDSRIYWTNW 421 (652)
Q Consensus 405 ~~Iavdp~~g~Lywtd~ 421 (652)
.++|+||.++.||+...
T Consensus 389 ~~~a~dp~~g~~yv~~~ 405 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLN 405 (571)
T ss_dssp CBCEEETTTTEEEEEEE
T ss_pred CCceECCCCCEEEEEch
Confidence 46899999999999753
No 430
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=54.97 E-value=5.7 Score=34.49 Aligned_cols=30 Identities=23% Similarity=0.571 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCc--ccceecCCCceEEEeCCcc
Q psy5768 236 GTNPCGVNNGGCA--ELCLYNGVSAVCACAHGVV 267 (652)
Q Consensus 236 ~~n~C~~~ng~Cs--~lC~~~~~~~~C~C~~G~l 267 (652)
++++|..+ .|. ..|+....+|+|.|+.||.
T Consensus 96 ~i~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 96 NINECEVE--PCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp ECCTTTTC--CSCTTCEEEEETTEEEEECCTTCB
T ss_pred CCCcCCCC--CCCCCCEeECCCCCeEeECCCCCc
Confidence 56778743 354 4888877789999999994
No 431
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=53.68 E-value=6 Score=32.33 Aligned_cols=39 Identities=33% Similarity=0.697 Sum_probs=28.9
Q ss_pred CCC-CCCCCCCCcc--cceecC-CCceEEEeCCcc--ccCCCccc
Q psy5768 237 TNP-CGVNNGGCAE--LCLYNG-VSAVCACAHGVV--AQDGKSCS 275 (652)
Q Consensus 237 ~n~-C~~~ng~Cs~--lC~~~~-~~~~C~C~~G~l--~~dg~~C~ 275 (652)
.|| |..+||||+. .|.... ..-.|.|..||- .-+|.-|.
T Consensus 50 ~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~ 94 (105)
T 1n1i_A 50 ASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCS 94 (105)
T ss_dssp CCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred CCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEEC
Confidence 388 9999999996 788664 567899998862 22665554
No 432
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=52.84 E-value=2.5e+02 Score=30.43 Aligned_cols=159 Identities=11% Similarity=0.075 Sum_probs=90.2
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCCcc--------
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR-------- 74 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs~~-------- 74 (652)
|++++ ..+.|++++.++ ....+. .. ..-.-+.+.+|+|+|.++.|+... ..++|..+++.+...
T Consensus 100 LAs~s-~dg~V~iwd~~~-~l~~l~-~~--~~~~~~sv~svafSPDG~~LAsgs---~DGtVkIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 100 MAVLS-NNGNVSVFKDNK-MLTNLD-SK--GNLSSRTYHCFEWNPIESSIVVGN---EDGELQFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp EEEEE-TTSCEEEEETTE-EEEECC-CS--SCSTTTCEEEEEECSSSSCEEEEE---TTSEEEEEECCCCTTTCCCCEEE
T ss_pred EEEEe-CCCcEEEEeCCc-eeeecc-CC--CccccccEEEEEEcCCCCEEEEEc---CCCEEEEEECCCCccccccceee
Confidence 44443 445577777555 222222 11 111124689999999999999876 678899999887642
Q ss_pred EEEEeCC---CcCCccCCCCcEEEEccCCcEEEEeCCCCEEEEEEcCCCcE----EEEEeCCCCCceeEEEcCCCCeEEE
Q psy5768 75 ETVVSQK---KYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYR----YVLISGGVDQPSALAVDPESGYLFW 147 (652)
Q Consensus 75 ~~v~~~~---~~~~p~~~~~~lavDw~~~~lY~~d~~~~~I~v~~~dg~~~----~~l~~~~~~~P~~iavd~~~g~lyw 147 (652)
.++ ..+ ....+. .+|+ ..+. +.+-+..+.|.+-+.++... .++....-....+++.. +++|--
T Consensus 172 ~ti-~~~~~gh~~~V~----sVaw--SPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LAS 241 (588)
T 2j04_A 172 SSI-RLSDAGSKDWVT----HIVW--YEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVL 241 (588)
T ss_dssp EEE-ECSCTTCCCCEE----EEEE--ETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEE
T ss_pred eee-ecccccccccEE----EEEE--cCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEE
Confidence 222 211 022344 5544 4444 56666677888888877653 22322222456777775 345544
Q ss_pred EecCCCCeEEEEeCCCCCcEEEEeecccCceeEEE
Q psy5768 148 SESGKIPLIARAGLDGKKQTILAQEIIMPIKDITL 182 (652)
Q Consensus 148 td~~~~~~I~~~~ldg~~~~~~~~~~~~~p~gl~l 182 (652)
+. ...|..-++++.....+.........++++
T Consensus 242 a~---~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 242 TC---PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp EC---SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred Ee---CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 42 247777777776554443223345667777
No 433
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=52.63 E-value=1.8e+02 Score=28.70 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=65.7
Q ss_pred CCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeCCCCeEEEEecCCCceEEEec-CCCCc
Q psy5768 413 DSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSK-ISPLH 491 (652)
Q Consensus 413 ~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~ldG~~~~~l~~-~~~~~ 491 (652)
.+.+|+.... ..+...++. .-+.+.......+.+++++ +++||++.. .+.|..++.......--.. .....
T Consensus 239 ~~~v~~~~~~---g~l~~~d~~--tG~~~w~~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~ 310 (376)
T 3q7m_A 239 NGVVFALAYN---GNLTALDLR--SGQIMWKRELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQSDLLHRL 310 (376)
T ss_dssp TTEEEEECTT---SCEEEEETT--TCCEEEEECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEECTTTTSC
T ss_pred CCEEEEEecC---cEEEEEECC--CCcEEeeccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeecccCCCc
Confidence 4788887543 366655553 2234444445556677777 889999875 4578888875433322222 11123
Q ss_pred eeEEEEeCCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 492 PFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 492 p~glav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
..+.++.++.||..+. .+.|+.++..+|+......
T Consensus 311 ~~~~~~~~~~l~v~~~-~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 311 LTSPVLYNGNLVVGDS-EGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp CCCCEEETTEEEEECT-TSEEEEEETTTCCEEEEEE
T ss_pred ccCCEEECCEEEEEeC-CCeEEEEECCCCcEEEEEe
Confidence 3455678999999874 5689999988887654433
No 434
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=52.23 E-value=9.7 Score=39.97 Aligned_cols=12 Identities=25% Similarity=0.357 Sum_probs=10.3
Q ss_pred ceeeeccCceee
Q psy5768 569 QVVCSCFTGKVL 580 (652)
Q Consensus 569 ~~~C~Cp~g~~l 580 (652)
.++|.|+.||..
T Consensus 215 ~g~C~C~~G~~G 226 (423)
T 2gy5_A 215 TGECICPPGFMG 226 (423)
T ss_dssp TCCEECCTTEES
T ss_pred CCcEeCCCCccC
Confidence 578999999975
No 435
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=52.06 E-value=2e+02 Score=28.99 Aligned_cols=195 Identities=11% Similarity=0.048 Sum_probs=108.4
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcce--EEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHR--VLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQ 391 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~--~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~ 391 (652)
..+.++++|. .+..+-...+.+...+....... .+......+.++++.+.++.|. +-...+.|.+.++......
T Consensus 190 ~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~-s~~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 190 ARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA-SGGNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp SCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEESSCCSSC
T ss_pred CceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeee-eeeccccceEEeecccccc
Confidence 3455666652 34444444566666654433222 2223445677888887777665 4445577777776543221
Q ss_pred cEEE-EEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEEEEcCCCCCceEEEecCCCEEEEEeC-CCC
Q psy5768 392 RIVV-VRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDA-RLD 469 (652)
Q Consensus 392 ~~~~-~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~~P~glaiD~~~~~LYw~D~-~~~ 469 (652)
...+ ..........+++..|..+.++.+-.+.....|...++........+. .-..+..+...+..+.|+.+-. ..+
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~ 344 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQN 344 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEecCCC
Confidence 1111 112334566889999988888777554433356555554333222222 2235678888888888887754 346
Q ss_pred eEEEEecCCCceEEEecCCCCceeEEEEe-CCEEEEEcCCCCeEE
Q psy5768 470 KIERCDYDGTNRIVLSKISPLHPFDMAVY-GEFIFWTDWVIHAVL 513 (652)
Q Consensus 470 ~I~~~~ldG~~~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~I~ 513 (652)
.|...++........+.+......+|++. ++....|-...+.|.
T Consensus 345 ~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 345 QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 78888887555444444333456777775 233334444445443
No 436
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=52.03 E-value=5.5 Score=28.59 Aligned_cols=26 Identities=19% Similarity=0.507 Sum_probs=19.1
Q ss_pred CCccccccCCCCceeeeccCceeeccCCcccC
Q psy5768 557 NCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 557 ~Cs~lCl~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
.|...|+ .-|.|++||++..++.|++
T Consensus 27 ~C~~~C~------~GC~C~~G~v~~~~g~CV~ 52 (56)
T 1ccv_A 27 ICTMQCR------IGCQCQEGFLRNGEGACVL 52 (56)
T ss_dssp CSSSSCE------EEEEECTTCEEETTTEEEC
T ss_pred CCcCcCC------CCCcCCCCeeECCCCcccC
Confidence 4555554 2399999999976678886
No 437
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=51.56 E-value=5.1 Score=43.68 Aligned_cols=37 Identities=27% Similarity=0.623 Sum_probs=24.7
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCceeeecc-CceeeccCCcccC
Q psy5768 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCF-TGKVLMEDNRSCT 588 (652)
Q Consensus 544 ~~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp-~g~~l~~d~~C~~ 588 (652)
..|..+||.. .|.|... ..++|+|.|+ .||.. ++|..
T Consensus 3 d~C~~~PC~n-gG~C~~~----~~~~y~C~C~~~G~~G---~~Ce~ 40 (553)
T 1q4g_A 3 NPCCYYPCQH-QGICVRF----GLDRYQCDCTRTGYSG---PNCTI 40 (553)
T ss_dssp CGGGGCCCCT-TCEEEEE----TTTEEEEECTTSSEET---TTTCE
T ss_pred CcCCCCCCCC-CCCcCCC----CCCceEeeCCCCCcCC---CCCCC
Confidence 4577789973 2446532 3347999999 99975 45754
No 438
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=51.49 E-value=1.6e+02 Score=27.75 Aligned_cols=180 Identities=8% Similarity=-0.058 Sum_probs=0.0
Q ss_pred EEEecCCCCeEEEEecCCCeeEEEecCCCCCCCCCCCeeEEEEECCCCEEEEEeccCCcceEEEEEcCCC----ccEEEE
Q psy5768 3 IAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT----KRETVV 78 (652)
Q Consensus 3 i~v~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~lyw~d~~~~~~~I~~~~~dgs----~~~~v~ 78 (652)
++++....+.+...+............. ....+..+++.+.+..|+-.. ..+.|..+++... ......
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~ 192 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSG-----HSQEVCGLRWAPDGRHLASGG---NDNLVNVWPSAPGEGGWVPLQTF 192 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSSEEEEEE---TTSCEEEEESSCBTTBSCCSEEE
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcC-----ccCceEEEEEcCCCCEEEEEe---cCcceeEEECCCCcccccceeee
Q ss_pred eCCCcCCccCCCCcEEEEccCCcEE--EEeCCCCEEEEEEcCCCcEEEEEeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5768 79 SQKKYPAVTACNLHIAVDWIAQNIY--WSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 156 (652)
Q Consensus 79 ~~~~~~~p~~~~~~lavDw~~~~lY--~~d~~~~~I~v~~~dg~~~~~l~~~~~~~P~~iavd~~~g~lywtd~~~~~~I 156 (652)
... ...+. .++......++. .+....+.|.+.+............. .....++..|..++++.+.......|
T Consensus 193 ~~~-~~~v~----~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~sg~~d~~i 266 (318)
T 4ggc_A 193 TQH-QGAVK----AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQL 266 (318)
T ss_dssp CCC-CSCEE----EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred ccc-CCceE----EEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce-eeeeeeeecccccceEEEEEcCCCEE
Q ss_pred EEEeCCCCCcEEEEeecccCceeEEEeccCCEEEEEeCCC
Q psy5768 157 ARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSK 196 (652)
Q Consensus 157 ~~~~ldg~~~~~~~~~~~~~p~gl~lD~~~~~ly~~d~~g 196 (652)
..-++........+..--...+.|++.+.+.+|.-...||
T Consensus 267 ~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 267 VIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC
No 439
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=51.10 E-value=8.2 Score=31.26 Aligned_cols=29 Identities=31% Similarity=0.746 Sum_probs=24.2
Q ss_pred CCCCCCCCCCcc--cceecC-----CCceEEEeCCc
Q psy5768 238 NPCGVNNGGCAE--LCLYNG-----VSAVCACAHGV 266 (652)
Q Consensus 238 n~C~~~ng~Cs~--lC~~~~-----~~~~C~C~~G~ 266 (652)
++|..+||||.. .|.... ....|.|..||
T Consensus 47 ~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 47 PTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp CCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred CChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 799999999996 788653 36889999986
No 440
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=49.96 E-value=1.8e+02 Score=27.94 Aligned_cols=103 Identities=8% Similarity=0.026 Sum_probs=60.0
Q ss_pred EEecCCCCeEEEEecCCCe---eEEEecCCCCCCCCCCCeeEEEEECC-CCEEEEEeccCCcceEEEEEcCCCc-cEE-E
Q psy5768 4 AVSSPTQSKIVVCNLEGEY---QTTILSNESNDTSTLSKISSIAVWPV-KGKMFWSNVTKQVVTIEMAFMDGTK-RET-V 77 (652)
Q Consensus 4 ~v~~~~~~~I~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~v~~d~~-~~~lyw~d~~~~~~~I~~~~~dgs~-~~~-v 77 (652)
+++....+.|+++|+.... ..++.. .-..+.+|++.+. ++.++.+= ...+.|..+++.... ... .
T Consensus 28 lasgs~D~~v~lwd~~~~~~~~~~~l~g-------H~~~V~~v~~~~~~~~~~l~s~--s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 28 LATCSSDRSVKIFDVRNGGQILIADLRG-------HEGPVWQVAWAHPMYGNILASC--SYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEEC-------CSSCEEEEEECCGGGSSCEEEE--ETTSCEEEECCSSSCCCEEEE
T ss_pred EEEEeCCCeEEEEEecCCCcEEEEEEcC-------CCccEEEEEeCCCCCCCEEEEE--ECCCEEEEEECCCCcceEEEE
Confidence 3444456778888886432 223332 2357889999653 34444444 356788888876432 222 2
Q ss_pred EeCCCcCCccCCCCcEEEEccC-CcEEEEeCCCCEEEEEEcCCC
Q psy5768 78 VSQKKYPAVTACNLHIAVDWIA-QNIYWSDPKENVIEVARLTGQ 120 (652)
Q Consensus 78 ~~~~~~~~p~~~~~~lavDw~~-~~lY~~d~~~~~I~v~~~dg~ 120 (652)
+... ...+. .+++.... +++..+-+..+.|.+.++.+.
T Consensus 99 ~~~h-~~~V~----~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 99 HAGH-DSSVN----SVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp ECCC-SSCCC----EEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred ccCC-CCceE----EEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 2333 34566 77776542 456666666778888777654
No 441
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=49.24 E-value=1.9e+02 Score=27.99 Aligned_cols=159 Identities=13% Similarity=0.127 Sum_probs=79.6
Q ss_pred cceEEEEEEEcCCCeEEEeecccccEEEEeccCCc-----ce--EEe-eccCceeeeEEEccCCEEEEEeCCCCeEEEEE
Q psy5768 313 MKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSN-----HR--VLL-ERQGSVEGLAYEYVHNYLYWTCNNDATINKID 384 (652)
Q Consensus 313 ~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~-----~~--~i~-~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~ 384 (652)
...+.+++|.+..+.|.-.. ..+.|...++.... .+ ..+ .....+.+|++.+.++.|. +-+..++|.+-+
T Consensus 58 ~~~v~~v~~sp~~~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~la-s~s~D~~v~iwd 135 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGS-FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA-TCSRDKSVWIWE 135 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEE-TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEE-EEETTSCEEEEE
T ss_pred cCCEEEEEECCCCCEEEEEe-CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCEEEEEe
Confidence 34577899988766554443 45667666653211 11 112 2334678899988776655 445567888888
Q ss_pred cCCCCCccEEEEEe-CCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCCceEE--EEcCCCCCceEEEecCC--C
Q psy5768 385 LDSPKAQRIVVVRL-GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESI--ITTDITMPNALALDHQA--E 459 (652)
Q Consensus 385 ~~~~~~~~~~~~~~-~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~~~~l--~~~~l~~P~glaiD~~~--~ 459 (652)
+.......+.+..+ .......+++.+|...+|.-..... .|....+.....+.+ +...-.....+++++.. .
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~---~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD---TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS---CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC---eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 74221112222222 2345678899999766555444432 333333332211111 11122344577777663 3
Q ss_pred EEEEEeCCCCeEEEEecC
Q psy5768 460 KLFWGDARLDKIERCDYD 477 (652)
Q Consensus 460 ~LYw~D~~~~~I~~~~ld 477 (652)
+|.-+ ...+.|...++.
T Consensus 213 ~l~s~-s~D~~v~iw~~~ 229 (330)
T 2hes_X 213 RLCSG-SDDSTVRVWKYM 229 (330)
T ss_dssp EEEEE-ETTSCEEEEEEE
T ss_pred EEEEE-eCCCeEEEEEec
Confidence 34332 233445444443
No 442
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=48.40 E-value=4.9 Score=43.97 Aligned_cols=24 Identities=25% Similarity=0.649 Sum_probs=17.7
Q ss_pred ccee-cCCCceEEEe-CCccccCCCcccc
Q psy5768 250 LCLY-NGVSAVCACA-HGVVAQDGKSCSE 276 (652)
Q Consensus 250 lC~~-~~~~~~C~C~-~G~l~~dg~~C~~ 276 (652)
.|.. ..++|.|.|+ .|| .|+.|..
T Consensus 14 ~C~~~~~~~y~C~C~~~G~---~G~~Ce~ 39 (587)
T 3nt1_A 14 ECMSTGFDQYKCDCTRTGF---YGENCTT 39 (587)
T ss_dssp EEEEEETTEEEEECTTSSE---ETTTTCE
T ss_pred EeeCCCCCCeEEecCCCCc---cCCCCCC
Confidence 5664 3358999999 998 4778873
No 443
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=48.33 E-value=3.3e+02 Score=30.47 Aligned_cols=152 Identities=11% Similarity=0.000 Sum_probs=80.8
Q ss_pred CCeEEEEecCCCeeEEEecCC-----CCCCCCCCCeeEEEEECC-CCEEEEEecc----CCcceEEEEEcCCCccEEEEe
Q psy5768 10 QSKIVVCNLEGEYQTTILSNE-----SNDTSTLSKISSIAVWPV-KGKMFWSNVT----KQVVTIEMAFMDGTKRETVVS 79 (652)
Q Consensus 10 ~~~I~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~v~~d~~-~~~lyw~d~~----~~~~~I~~~~~dgs~~~~v~~ 79 (652)
.+.|++.+-.|+....+.... +........+.+|++|+. .++||..-.. .....|+|..-.|...+.+..
T Consensus 42 ~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~ 121 (763)
T 3a0f_A 42 IGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRS 121 (763)
T ss_dssp SSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEEC
T ss_pred cCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccC
Confidence 456777776777666654311 000113456899999985 4788875410 013678877666776666542
Q ss_pred CCCcC-----C--ccCCCCcEEEEccC-CcEEEEeCCCCEEEEEEcCCC-cEEEEE-eCC---CCCceeEEEcCCC-CeE
Q psy5768 80 QKKYP-----A--VTACNLHIAVDWIA-QNIYWSDPKENVIEVARLTGQ-YRYVLI-SGG---VDQPSALAVDPES-GYL 145 (652)
Q Consensus 80 ~~~~~-----~--p~~~~~~lavDw~~-~~lY~~d~~~~~I~v~~~dg~-~~~~l~-~~~---~~~P~~iavd~~~-g~l 145 (652)
.-... . .. .|+++... +.+|..- ....|.+..-.|+ ..++.. ... ......|++||.+ +.|
T Consensus 122 ~~~~~~~~~g~~~~~----~l~v~p~~~~~v~a~~-~~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~ 196 (763)
T 3a0f_A 122 PVPMGANDMGRNGGE----RLAVNPHWTDELWFGS-RTQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTA 196 (763)
T ss_dssp SSCCCTTSTTTTSBC----CEEECTTSTTCEEEEC-SSSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCE
T ss_pred CcccCccccCccccc----eEEECCCCCCEEEEEe-CCCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEE
Confidence 11011 1 13 68998764 5666654 3456766544443 332210 000 0123467899865 468
Q ss_pred EEEecCCCCeEEEEeCCCCCcE
Q psy5768 146 FWSESGKIPLIARAGLDGKKQT 167 (652)
Q Consensus 146 ywtd~~~~~~I~~~~ldg~~~~ 167 (652)
|..-.... .|.+..=.|..-+
T Consensus 197 ~~~~~~~g-~v~~S~DgG~tW~ 217 (763)
T 3a0f_A 197 YVASHAVG-GLWVTWDGGANWS 217 (763)
T ss_dssp EEEESSTT-CEEEESSSSSSCE
T ss_pred EEEEeCCC-eEEEECCCCCCcc
Confidence 87755311 4666644454433
No 444
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=46.06 E-value=2.3e+02 Score=27.89 Aligned_cols=192 Identities=10% Similarity=0.048 Sum_probs=100.1
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeeccCceeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEE
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIV 394 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~~~~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~ 394 (652)
.+.+++|.+....|...... .+...+++.. .............+++.+.++.+..+-...++|.+-++.. .+.
T Consensus 21 ~V~~v~fs~dg~~la~g~~~--~~~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~----~~~ 93 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLK--SFEIYNVHPV-AHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK----KQD 93 (355)
T ss_dssp CCCEEEECTTSSEEEEECSS--EEEEEEETTE-EEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT----TEE
T ss_pred ceEEEEECCCCCEEEEEcCC--EEEEEecCCc-ceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC----CcE
Confidence 35678888766655544332 2333344322 1222222334566777777777777777677888888653 233
Q ss_pred EEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCC-Cc-eEEEEcCCCCCce-EEEecCCCEEEEE-eCCCCe
Q psy5768 395 VVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGF-GT-ESIITTDITMPNA-LALDHQAEKLFWG-DARLDK 470 (652)
Q Consensus 395 ~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~-~~-~~l~~~~l~~P~g-laiD~~~~~LYw~-D~~~~~ 470 (652)
+..........++++++. .++.+.. .+|...++... .. ..+.. |.+ +++.+ +.|..+ -...+.
T Consensus 94 ~~~~~~~~~v~~v~~~~~--~~~~~~~----~~i~i~d~~~~~~~~~~~~~-----~~~~~~~s~--~~la~~sg~~~g~ 160 (355)
T 3vu4_A 94 VSRIKVDAPVKDLFLSRE--FIVVSYG----DVISVFKFGNPWKRITDDIR-----FGGVCEFSN--GLLVYSNEFNLGQ 160 (355)
T ss_dssp EEEEECSSCEEEEEECSS--EEEEEET----TEEEEEESSTTCCBSSCCEE-----EEEEEEEET--TEEEEEESSCTTC
T ss_pred EEEEECCCceEEEEEcCC--EEEEEEc----CEEEEEECCCCceeeEEecc-----CCceEEEEc--cEEEEeCCCcCcE
Confidence 333333456778888763 3444321 15555555443 11 11111 333 23332 555554 345566
Q ss_pred EEEEecCCCc-----------------eEEEecCCCCceeEEEEe-CCEEEEEcCCCCe-EEEEEccCCceEEEEe
Q psy5768 471 IERCDYDGTN-----------------RIVLSKISPLHPFDMAVY-GEFIFWTDWVIHA-VLRANKYTGEEVYTLR 527 (652)
Q Consensus 471 I~~~~ldG~~-----------------~~~l~~~~~~~p~glav~-~~~lYwtd~~~~~-I~~~~k~~g~~~~~~~ 527 (652)
|...++.... ..++ ........+|++. ++.+..+-...+. |..-+..+|+....+.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp EEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 7777776533 2222 2222445677775 3344455555565 6666777777666665
No 445
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=44.98 E-value=6.1 Score=43.05 Aligned_cols=23 Identities=26% Similarity=0.738 Sum_probs=17.6
Q ss_pred ccee-cCCCceEEEe-CCccccCCCccc
Q psy5768 250 LCLY-NGVSAVCACA-HGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~~-~~~~~~C~C~-~G~l~~dg~~C~ 275 (652)
.|.. ...+|+|.|+ .||. |..|.
T Consensus 15 ~C~~~~~~~y~C~C~~~G~~---G~~Ce 39 (553)
T 1q4g_A 15 ICVRFGLDRYQCDCTRTGYS---GPNCT 39 (553)
T ss_dssp EEEEETTTEEEEECTTSSEE---TTTTC
T ss_pred CcCCCCCCceEeeCCCCCcC---CCCCC
Confidence 4655 5568999999 9984 67786
No 446
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=44.91 E-value=8.6 Score=31.39 Aligned_cols=30 Identities=30% Similarity=0.777 Sum_probs=24.1
Q ss_pred CC-CCCCCCCCcc--ccccCCCCceeeeccCce
Q psy5768 549 TP-CRHLNGNCDD--ICKLDETGQVVCSCFTGK 578 (652)
Q Consensus 549 ~~-C~~~ng~Cs~--lCl~~~~~~~~C~Cp~g~ 578 (652)
|| |..+||||.- -|.......-+|.|..++
T Consensus 51 Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 51 SITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 78 9999999963 388775457899999885
No 447
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=44.68 E-value=3.5e+02 Score=29.72 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=33.2
Q ss_pred eEEEecCCCCeEEEEec-CCCeeEEEecC-CCC-CCCCCCCeeEEEEECCCCEEEEEeccCC-----cceEEEEEc-CCC
Q psy5768 2 FIAVSSPTQSKIVVCNL-EGEYQTTILSN-ESN-DTSTLSKISSIAVWPVKGKMFWSNVTKQ-----VVTIEMAFM-DGT 72 (652)
Q Consensus 2 ~i~v~~~~~~~I~~~~~-~g~~~~~~~~~-~~~-~~~~~~~~~~v~~d~~~~~lyw~d~~~~-----~~~I~~~~~-dgs 72 (652)
.|+|.+ ..+.|+.+|. +|+.+-.+... ... .......|. + .+++||+.. .. .+.|+.++. +|.
T Consensus 130 ~v~v~~-~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~---v--~~~~v~v~~--~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 130 KVYVGA-WDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPR---V--FKGKVIIGN--GGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp EEEEEC-TTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCE---E--ETTEEEECC--BCTTTCCBCEEEEEETTTCC
T ss_pred EEEEEc-CCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcE---E--ECCEEEEEe--cccccCCCCEEEEEECCCCc
Confidence 356654 3567888887 57766555432 100 000112232 2 267888765 22 456777775 354
Q ss_pred c
Q psy5768 73 K 73 (652)
Q Consensus 73 ~ 73 (652)
.
T Consensus 202 ~ 202 (677)
T 1kb0_A 202 R 202 (677)
T ss_dssp E
T ss_pred E
Confidence 3
No 448
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=43.27 E-value=11 Score=33.31 Aligned_cols=23 Identities=30% Similarity=0.663 Sum_probs=18.6
Q ss_pred cceecCCCceEEEeCCccccCCCccc
Q psy5768 250 LCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 250 lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
.|.....+|+|.|+.||- |..|.
T Consensus 132 ~C~~~~~~~~c~C~~g~~---G~~Ce 154 (162)
T 1g1s_A 132 ECLETIGNYTCSCYPGFY---GPECE 154 (162)
T ss_dssp EEEECSSSEEEEECTTEE---STTSC
T ss_pred EEecCCCCceEeCCCCCc---Ccccc
Confidence 577777789999999994 56786
No 449
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=43.13 E-value=18 Score=36.34 Aligned_cols=11 Identities=27% Similarity=0.368 Sum_probs=7.9
Q ss_pred eeeeccCceee
Q psy5768 570 VVCSCFTGKVL 580 (652)
Q Consensus 570 ~~C~Cp~g~~l 580 (652)
++|.|+.||..
T Consensus 197 ~~C~C~~G~~G 207 (324)
T 2ygq_A 197 GFCICPPGFYG 207 (324)
T ss_dssp CCEECCTTCBT
T ss_pred CEEeCCCCccC
Confidence 56788888764
No 450
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=42.57 E-value=14 Score=24.86 Aligned_cols=6 Identities=33% Similarity=1.625 Sum_probs=2.6
Q ss_pred cCCCCc
Q psy5768 641 CDNNKC 646 (652)
Q Consensus 641 C~~~~C 646 (652)
|.+|+|
T Consensus 32 cndgqc 37 (57)
T 1e0f_I 32 CNDGQC 37 (57)
T ss_dssp BSSSCB
T ss_pred ccCCcc
Confidence 444444
No 451
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=41.80 E-value=4e+02 Score=29.58 Aligned_cols=196 Identities=17% Similarity=0.130 Sum_probs=101.1
Q ss_pred eEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeec-------cCceeeeEEEcc-CCEEEEEeCC--------CC
Q psy5768 315 NIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER-------QGSVEGLAYEYV-HNYLYWTCNN--------DA 378 (652)
Q Consensus 315 ~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~-------~~~~~glAvDw~-~~~LYwtd~~--------~~ 378 (652)
.+.+|++++.+..+.|+-...+.|+|..-.|..=+.+... ...+..|++|+. .+.||.+-.. ..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 5678999988644444444456788887556443444321 235789999984 4678877532 23
Q ss_pred eEEEEEcCCCCCccEEEEEeCCC-------CCceEEEEeCCC-CEEEEEecCCCCCceEEEeecCCCceEEEEcCCC---
Q psy5768 379 TINKIDLDSPKAQRIVVVRLGQH-------DKPRGIDIDSCD-SRIYWTNWNSHLPSIQRAFFSGFGTESIITTDIT--- 447 (652)
Q Consensus 379 ~I~~~~~~~~~~~~~~~~~~~~~-------~~P~~Iavdp~~-g~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~l~--- 447 (652)
.|.+. .|+-.. -+.+...... .....|++||.+ +.||..... ...|+|..=.|..-+.+. .+.
T Consensus 104 ~l~~S-~DgG~T-W~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~--g~gl~~S~DgG~tW~~~~--~~~~~~ 177 (737)
T 2cn3_A 104 AILRS-TDRGET-WEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC--GNGLWRSTDYGVTWSKVE--SFPNPG 177 (737)
T ss_dssp EEEEE-SSSSSS-CEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST--TCCEEEESSTTSSCEECT--TCCCCC
T ss_pred cEEEe-CCCCCC-cccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc--CCcEEEeCCCCcceeccc--CCCCCc
Confidence 45444 333111 1222211010 012579999975 567776421 126776654454433221 111
Q ss_pred ----CC-----------ceEEEecCC-------CEEEEEeCCC-CeEEEEecCCCceEEEecCCC--CceeEEEEe-CCE
Q psy5768 448 ----MP-----------NALALDHQA-------EKLFWGDARL-DKIERCDYDGTNRIVLSKISP--LHPFDMAVY-GEF 501 (652)
Q Consensus 448 ----~P-----------~glaiD~~~-------~~LYw~D~~~-~~I~~~~ldG~~~~~l~~~~~--~~p~glav~-~~~ 501 (652)
.| ..+++|+.. .+||.+-... ..|++. .||...-..+.... ..|..+++. .+.
T Consensus 178 ~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~DgG~tW~~~~~~p~~~~~~~~~~~~~~~ 256 (737)
T 2cn3_A 178 TYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDGGVTWKAVPGQPKGLLPHHGVLASNGM 256 (737)
T ss_dssp CCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SSTTSCCEECTTCCCSSEEEEEEECTTSE
T ss_pred ccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCCCCceEECCCCCCcccceEEEECCCCe
Confidence 01 137787653 4899875332 246665 55433333333211 123334444 567
Q ss_pred EEEEc---------CCCCeEEEEEc
Q psy5768 502 IFWTD---------WVIHAVLRANK 517 (652)
Q Consensus 502 lYwtd---------~~~~~I~~~~k 517 (652)
||.+- ...+.|+|.+.
T Consensus 257 l~~~~~d~~g~y~~~~~g~v~~s~d 281 (737)
T 2cn3_A 257 LYITYGDTCGPYDGNGKGQVWKFNT 281 (737)
T ss_dssp EEEEEESSCCSSCCSCCEEEEEEET
T ss_pred EEEEecCCCCccccccCceEEEEeC
Confidence 77652 14456777664
No 452
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=41.75 E-value=2.3e+02 Score=31.89 Aligned_cols=151 Identities=15% Similarity=0.115 Sum_probs=87.1
Q ss_pred CCeeEEEEECCC-CEEEEEeccCCcceEEEEEcCCCccEEEEeCC----------CcCCccCCCCcEEEEccC-CcEEEE
Q psy5768 38 SKISSIAVWPVK-GKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK----------KYPAVTACNLHIAVDWIA-QNIYWS 105 (652)
Q Consensus 38 ~~~~~v~~d~~~-~~lyw~d~~~~~~~I~~~~~dgs~~~~v~~~~----------~~~~p~~~~~~lavDw~~-~~lY~~ 105 (652)
..+.+|+++|.+ +.+|..- ..+.|+|..-.|...+.+.... ....+. .|++|..+ +.||.+
T Consensus 21 g~i~~i~~~p~~~~~~y~~~---~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~----~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYART---DIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE----SIALDPHNPDRLYLA 93 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEE---SSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE----EEECCTTCTTCEEEE
T ss_pred CceeEEEeCCCCCCEEEEEe---ccCcEEEECCCCCCeeECccCccccccCCCccccccee----EEEECCCCCCEEEEE
Confidence 589999999988 4555543 4578998887787666654310 022345 88999854 677775
Q ss_pred eC------CCCEEEEEEcCCC-cEEEEEeCCC-----CCc--eeEEEcCCC-CeEEEEecCCCCeEEEEeCCCCCcEEEE
Q psy5768 106 DP------KENVIEVARLTGQ-YRYVLISGGV-----DQP--SALAVDPES-GYLFWSESGKIPLIARAGLDGKKQTILA 170 (652)
Q Consensus 106 d~------~~~~I~v~~~dg~-~~~~l~~~~~-----~~P--~~iavd~~~-g~lywtd~~~~~~I~~~~ldg~~~~~~~ 170 (652)
-. ....|.+..-.|+ ..++...... .+. ..|+++|.+ +.+|... ....|.|..=.|..-+.+.
T Consensus 94 ~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~--~~~~l~~S~DgG~TW~~~~ 171 (763)
T 3a0f_A 94 QGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS--RTQGLWRSTDRAQTWSRMN 171 (763)
T ss_dssp ECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC--SSSCEEEESSTTSSCEECT
T ss_pred ecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe--CCCcEEEECCCCcCccccc
Confidence 43 2466777655554 4444321111 111 369999874 5676653 2346777654455443322
Q ss_pred eec-----ccCceeEEEeccC-CEEEEEeCCCC
Q psy5768 171 QEI-----IMPIKDITLDLKF-FSAFYRNLSKG 197 (652)
Q Consensus 171 ~~~-----~~~p~gl~lD~~~-~~ly~~d~~g~ 197 (652)
... ......|++|+.+ ++||.....++
T Consensus 172 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g 204 (763)
T 3a0f_A 172 QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG 204 (763)
T ss_dssp TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT
T ss_pred cCcccCCCccceEEEEECCCCCCEEEEEEeCCC
Confidence 100 0123467888764 57887766543
No 453
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=41.70 E-value=3.6e+02 Score=29.01 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=46.2
Q ss_pred eEEEecCCCEEEEEeC--------------------------------CCCeEEEEecC-CCceEEEecCCCCceeEEEE
Q psy5768 451 ALALDHQAEKLFWGDA--------------------------------RLDKIERCDYD-GTNRIVLSKISPLHPFDMAV 497 (652)
Q Consensus 451 glaiD~~~~~LYw~D~--------------------------------~~~~I~~~~ld-G~~~~~l~~~~~~~p~glav 497 (652)
++++|+.++.+|+... ..+.|..+|+. |..+-..-......--.++.
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t 495 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT 495 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe
Confidence 6899999999998532 13456677764 33322222111111112455
Q ss_pred eCCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 498 YGEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 498 ~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
.++.||..+ ..+.++.++..+|+.+-.+.
T Consensus 496 agglvf~g~-~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 496 AGNLVFTGT-GDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp TTTEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEC-CCCcEEEEECCCCCEEEEec
Confidence 678888865 46788889988888765554
No 454
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=40.49 E-value=2.9e+02 Score=27.61 Aligned_cols=172 Identities=12% Similarity=0.103 Sum_probs=85.5
Q ss_pred EEEEEEEcC-CCeEEEeecccccEEEEeccCCcceEEeecc-------------CceeeeEEEccC-CEEEEEeCCCCeE
Q psy5768 316 IIELSYDYK-RKTLFYSDIQKGTINSVFFNGSNHRVLLERQ-------------GSVEGLAYEYVH-NYLYWTCNNDATI 380 (652)
Q Consensus 316 ~~~v~~D~~-~~~lywsd~~~~~I~~~~~~g~~~~~i~~~~-------------~~~~glAvDw~~-~~LYwtd~~~~~I 380 (652)
+.+|.+|+. .+.||+.... +.|++..-.|..-+.+..+. ..+..|++|... +.||.... +.|
T Consensus 179 i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl 255 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGI 255 (394)
T ss_dssp EEEEEECTTCTTCEEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEE
T ss_pred eeEEEECCCCCCEEEEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--CeE
Confidence 456666764 3566665432 34666544443323322111 236788998753 67776542 446
Q ss_pred EEEEcCCCCCccEEEEEeCCC-----CCceEEEEeCC-CCEEEEEec------C----CCCCceEEEeecCCCceEEEEc
Q psy5768 381 NKIDLDSPKAQRIVVVRLGQH-----DKPRGIDIDSC-DSRIYWTNW------N----SHLPSIQRAFFSGFGTESIITT 444 (652)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~-----~~P~~Iavdp~-~g~Lywtd~------~----~~~~~I~r~~ldG~~~~~l~~~ 444 (652)
.+..-.|.. -+. +. ..+ .....|+++|. .+.||..-. . .....|++..=.|..-+.+ ..
T Consensus 256 ~~s~D~G~t--W~~-~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~-~~ 330 (394)
T 3b7f_A 256 YRMDRREGV--WKR-IG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQ-DR 330 (394)
T ss_dssp EEEETTTTE--EEC-GG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEE-CB
T ss_pred EEeCCCCCc--ceE-CC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceEC-CC
Confidence 655422211 111 10 111 12357889874 467777521 0 1123677654334444433 23
Q ss_pred CCCCC--------ceEEEecCC-CEEEEEeCCCCeEEEEecCCCceEEEecCCCCceeEEEE
Q psy5768 445 DITMP--------NALALDHQA-EKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAV 497 (652)
Q Consensus 445 ~l~~P--------~glaiD~~~-~~LYw~D~~~~~I~~~~ldG~~~~~l~~~~~~~p~glav 497 (652)
.+..+ .+|++|+.. ++||.+- ..+.|++..-.|..=+.+.. .+...++|++
T Consensus 331 glp~~~~~~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~~-~lp~~~~v~~ 390 (394)
T 3b7f_A 331 GLPTDQAWLTVKRQAMTADAHAPVGVYFGT-TGGEIWASADEGEHWQCIAS-HLPHIYAVQS 390 (394)
T ss_dssp TSCCSSCCCCCCTBSEEECCSSSCCEEEEC-TTSCEEEESSTTSBCEEEEC-SCSCEEEEEE
T ss_pred CCCCccccceEEEEEEEECCCCCCEEEEEe-CCCeEEEECCCCCCceEccc-CCCCeeEEEE
Confidence 33221 368898764 5677653 33457776666655444433 3344455543
No 455
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=39.12 E-value=5.7 Score=28.84 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=19.4
Q ss_pred CCCCCCCCCcccceecCCCceEEEeCCccccCCCccc
Q psy5768 239 PCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 239 ~C~~~ng~Cs~lC~~~~~~~~C~C~~G~l~~dg~~C~ 275 (652)
||.. .|.|...-+....+|.|.|+.|| .|..|.
T Consensus 15 pC~N-GGtC~~~~~~~~~~~~C~C~~Gf---~G~~Ce 47 (58)
T 3ltf_D 15 YCLN-DAHCFAVKIADLPVYSCECAIGF---MGQRCE 47 (58)
T ss_dssp TSCS-SCEEEEEEETTEEEEEEEECTTE---ESSSSC
T ss_pred cCCC-CCEEeCCccCCCCCEEeECCCCC---ccCCCc
Confidence 7762 34554211112236899999998 466776
No 456
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=38.84 E-value=23 Score=25.57 Aligned_cols=26 Identities=23% Similarity=0.640 Sum_probs=17.8
Q ss_pred CCccccccCCCCceeeeccCc--eeeccCCcccC
Q psy5768 557 NCDDICKLDETGQVVCSCFTG--KVLMEDNRSCT 588 (652)
Q Consensus 557 ~Cs~lCl~~~~~~~~C~Cp~g--~~l~~d~~C~~ 588 (652)
.|...|+ .-|.|++| |++..+..|++
T Consensus 29 ~C~~~C~------~GC~C~~Gtv~v~~~~~~CV~ 56 (60)
T 1hx2_A 29 LCDKKCN------QRCGCISGTVLKSKDSSECVH 56 (60)
T ss_dssp SCSSCCC------SEEEECTTCEESSTTCSSEEC
T ss_pred CCCCcCC------CCCCCCCCCeeEECCCCCEec
Confidence 4555554 23999999 77754577876
No 457
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=36.97 E-value=27 Score=36.15 Aligned_cols=33 Identities=21% Similarity=0.568 Sum_probs=22.8
Q ss_pred cceecCCCceEEEeC-CccccCCCcccccceEEEEee
Q psy5768 250 LCLYNGVSAVCACAH-GVVAQDGKSCSEYDAFIMYSR 285 (652)
Q Consensus 250 lC~~~~~~~~C~C~~-G~l~~dg~~C~~~~~~Ll~s~ 285 (652)
.|+....+|.|.|+. || .|..|.....-..|..
T Consensus 198 ~C~~~~~~~~C~C~~~~~---~G~~C~~~~~~~~f~~ 231 (410)
T 3asi_A 198 VCLQQWDGFSCDCSMTSF---SGPLCNDPGTTYIFSK 231 (410)
T ss_dssp EEEECSSSEEEECTTTSE---ESTTSCEECCEEEEEE
T ss_pred EecCCCCCceEeccCCcc---cCCCCCCCcccccccC
Confidence 677667789999996 77 4778985444344443
No 458
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=36.67 E-value=4.2e+02 Score=28.77 Aligned_cols=118 Identities=22% Similarity=0.318 Sum_probs=69.3
Q ss_pred EEEEcCCCccEEEEeCCCcCCccCCCCcE-EEEccCCcE--EEE-eCC-----------CCEEEEEEcCCCcEEEEEeCC
Q psy5768 65 EMAFMDGTKRETVVSQKKYPAVTACNLHI-AVDWIAQNI--YWS-DPK-----------ENVIEVARLTGQYRYVLISGG 129 (652)
Q Consensus 65 ~~~~~dgs~~~~v~~~~~~~~p~~~~~~l-avDw~~~~l--Y~~-d~~-----------~~~I~v~~~dg~~~~~l~~~~ 129 (652)
-.+.+||.....++..+ ..... -| |+||.+++| .|. |+. ...+.+.|.||--+..++-+
T Consensus 275 ~vayLDG~~Ps~v~~rG-~Ytr~----~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~G- 348 (620)
T 2zuy_A 275 GTAYLDGERPSLVMARG-YYTRT----VLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYG- 348 (620)
T ss_dssp EEECTTCC-CEEEEEEC-SSSSC----EEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEET-
T ss_pred eEEecCCCCceEEEecC-cccce----eEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEe-
Confidence 34556776556666666 44333 33 779988743 332 332 25688899888766666554
Q ss_pred CCCceeEEEcCCCCeEEEEe-cCCCCeEEEEeCCCCC--cEEEE-eecccCceeEE-EeccCCEEEEEeC
Q psy5768 130 VDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKK--QTILA-QEIIMPIKDIT-LDLKFFSAFYRNL 194 (652)
Q Consensus 130 ~~~P~~iavd~~~g~lywtd-~~~~~~I~~~~ldg~~--~~~~~-~~~~~~p~gl~-lD~~~~~ly~~d~ 194 (652)
+.++|. +|.+.|+- .+....+...++|... ..++. .++-..|.|.+ .|..++.++|--.
T Consensus 349 -----s~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 349 -----AMAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp -----TEEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred -----eeEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEec
Confidence 358885 77777764 3334467888888663 33432 33222344553 5777888888543
No 459
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=34.71 E-value=4.7e+02 Score=28.29 Aligned_cols=32 Identities=19% Similarity=0.428 Sum_probs=23.5
Q ss_pred EEEeCCEEEEEcCCCCeEEEEEccCCceEEEEe
Q psy5768 495 MAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 495 lav~~~~lYwtd~~~~~I~~~~k~~g~~~~~~~ 527 (652)
++..++.||... ..+.++.++..+|+.+-...
T Consensus 480 ~~tagg~vf~gt-~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 480 MATAGDLVFYGT-LDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred eEecCCEEEEEC-CCCeEEEEECCCCCEEEEee
Confidence 556688888865 46788889988998665444
No 460
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=34.52 E-value=18 Score=27.95 Aligned_cols=24 Identities=17% Similarity=0.306 Sum_probs=19.0
Q ss_pred eeeeccCceeeccC-CcccCcccccC
Q psy5768 570 VVCSCFTGKVLMED-NRSCTINTVCS 594 (652)
Q Consensus 570 ~~C~Cp~g~~l~~d-~~C~~~~~~C~ 594 (652)
.-|.|++||++..+ +.|++ ...|.
T Consensus 47 ~GC~C~~G~vr~~~~g~CV~-~~~Cp 71 (78)
T 2p3f_N 47 PACVCKDGFYRDTVIGDCVR-EEECD 71 (78)
T ss_dssp CEEEECSSCEEETTTTEEEC-GGGCC
T ss_pred CCcCcCCCEeEcCCCCceEC-HHHCC
Confidence 45999999999877 88987 45564
No 461
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=34.43 E-value=15 Score=29.82 Aligned_cols=31 Identities=26% Similarity=0.776 Sum_probs=24.4
Q ss_pred CCCCCCCCCCcc--ccccCCC----CceeeeccCcee
Q psy5768 549 TPCRHLNGNCDD--ICKLDET----GQVVCSCFTGKV 579 (652)
Q Consensus 549 ~~C~~~ng~Cs~--lCl~~~~----~~~~C~Cp~g~~ 579 (652)
++|..+||+|.. .|..... +..+|.|..|+.
T Consensus 47 ~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 47 PTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 789999999953 3887753 578999998853
No 462
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=33.88 E-value=26 Score=39.06 Aligned_cols=63 Identities=24% Similarity=0.550 Sum_probs=34.0
Q ss_pred eeeccCceeeccCCccc--CcccccCC-Cceeecc-CeecCCccCCCCCCCCCCCCCCCCCCCCC-CCCCCCeeecCC-C
Q psy5768 571 VCSCFTGKVLMEDNRSC--TINTVCSE-HDFKCSD-GMCIPFNQTCDRVYNCHDKSDEGILYCAM-RDCRPGYFKCDN-N 644 (652)
Q Consensus 571 ~C~Cp~g~~l~~d~~C~--~~~~~C~~-~~f~C~~-g~Ci~~~~~Cd~~~dC~d~sde~~~~C~~-~~C~~~~f~C~~-~ 644 (652)
+|.|+.||.. ..|. .....|.+ ....|++ |.|+. |...|..|.-.. .|+. ..|+. .|.+ +
T Consensus 539 ~C~C~~G~~G---~~Cec~~~~~~C~~~~g~~Cs~~G~C~~------g~C~C~~Gy~G~--~Ce~c~~C~~---~C~~~g 604 (687)
T 3k6s_B 539 KCRCHPGFEG---SACQCERTTEGCLNPRRVECSGRGRCRC------NVCECHSGYQLP--LCQECPGCPS---PCGKYI 604 (687)
T ss_dssp EEEECTTCCS---TTSCSCCSSCTTBCTTCSBTSSSCCBCS------SCBCCSTTCCTT--TTCCCTTSCC---CCTTTH
T ss_pred EEEcCCCCcC---CCCccCCCCCCCCCCCCCCCCCCCcCCC------CEEECCCCCcCC--CCCCCCCCCc---ccCCCC
Confidence 7999999865 3454 11234543 2345664 57765 334566555543 3654 45643 4654 3
Q ss_pred Ccc
Q psy5768 645 KCI 647 (652)
Q Consensus 645 ~Ci 647 (652)
.|+
T Consensus 605 ~Cv 607 (687)
T 3k6s_B 605 SCA 607 (687)
T ss_dssp HHH
T ss_pred CCC
Confidence 454
No 463
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=33.67 E-value=4.3e+02 Score=28.48 Aligned_cols=117 Identities=20% Similarity=0.339 Sum_probs=69.0
Q ss_pred EEEcCCCccEEEEeCCCcCCccCCCCcEEEEccCCcE--EEE-eCC-----------CCEEEEEEcCCCcEEEEEeCCCC
Q psy5768 66 MAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNI--YWS-DPK-----------ENVIEVARLTGQYRYVLISGGVD 131 (652)
Q Consensus 66 ~~~~dgs~~~~v~~~~~~~~p~~~~~~lavDw~~~~l--Y~~-d~~-----------~~~I~v~~~dg~~~~~l~~~~~~ 131 (652)
.+.+||.....|+..+ ..... +=.|+||.+++| .|. |.. .+.+.+.|.||--+..++-+
T Consensus 272 vayLDG~~Ps~v~~rG-yYtr~---~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G--- 344 (591)
T 2zux_A 272 IAYLDGQRPSLIMTRG-YYAKT---MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG--- 344 (591)
T ss_dssp EECTTSSSCEEEEEEC-CSSSC---EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET---
T ss_pred EEECCCCCceEEEecc-cccee---EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe---
Confidence 3556776555555555 33221 034779988865 452 332 25789999988766666554
Q ss_pred CceeEEEcCCCCeEEEEe-cCCCCeEEEEeCCCCCc--EEEE-eecccCceeE-EEeccCCEEEEEe
Q psy5768 132 QPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKKQ--TILA-QEIIMPIKDI-TLDLKFFSAFYRN 193 (652)
Q Consensus 132 ~P~~iavd~~~g~lywtd-~~~~~~I~~~~ldg~~~--~~~~-~~~~~~p~gl-~lD~~~~~ly~~d 193 (652)
+.++|. +|.+-|+- .+....+...++|.... .++. .+.-..|.|. -.|..++.++|--
T Consensus 345 ---s~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 345 ---SMAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp ---TEEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred ---eeEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEc
Confidence 457885 78877775 33344688888887643 3433 3322234455 3566777777743
No 464
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=32.79 E-value=16 Score=38.03 Aligned_cols=27 Identities=15% Similarity=0.445 Sum_probs=15.4
Q ss_pred ccccCCCCceeeeccCceeeccCCcccC
Q psy5768 561 ICKLDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 561 lCl~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
.|.+..+ .++|.|+.|+....-.+|.+
T Consensus 305 ~C~~~~g-~~~C~C~~~ttG~~CE~C~p 331 (426)
T 3zyj_B 305 VCVYDNS-KLTCECEHNTTGPDCGKCKK 331 (426)
T ss_dssp CEEEETT-EEEECCCTTEESSSSCEECT
T ss_pred hcCCCCC-CceeeCCCCCcCCCcccccc
Confidence 4665443 47888888875532244443
No 465
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=32.37 E-value=19 Score=27.91 Aligned_cols=36 Identities=28% Similarity=0.692 Sum_probs=19.1
Q ss_pred CCCCCC-CCCCCcc-cceecC--CCceEEEeCCccccCCCccc
Q psy5768 237 TNPCGV-NNGGCAE-LCLYNG--VSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 237 ~n~C~~-~ng~Cs~-lC~~~~--~~~~C~C~~G~l~~dg~~C~ 275 (652)
.+||.. .+..|-| .|+... ..+.|.|+.|| .|..|.
T Consensus 37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GY---tG~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGY---HGERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTE---ESTTCC
T ss_pred CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCc---cccccc
Confidence 355642 1234443 464222 36899999998 355563
No 466
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=31.83 E-value=5.9e+02 Score=28.53 Aligned_cols=160 Identities=11% Similarity=0.063 Sum_probs=83.4
Q ss_pred ceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEeec-------cCceeeeEEEcc-CCEEEEEeCC-C----CeE
Q psy5768 314 KNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLER-------QGSVEGLAYEYV-HNYLYWTCNN-D----ATI 380 (652)
Q Consensus 314 ~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~~-------~~~~~glAvDw~-~~~LYwtd~~-~----~~I 380 (652)
..+.+|++++.+..+.|+-...+.|+|..-.|..=+.+... ...+.+||+|+. .+.||.+-.. . ..|
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEE
Confidence 46788999987644444444456688777555433343321 236889999974 3567776432 2 455
Q ss_pred EEEEcCCCCCccEEEEEeC-CC-------CCceEEEEeCCCC-EEEEEecCCCCCceEEEeecCCCceEEEEcC---C--
Q psy5768 381 NKIDLDSPKAQRIVVVRLG-QH-------DKPRGIDIDSCDS-RIYWTNWNSHLPSIQRAFFSGFGTESIITTD---I-- 446 (652)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~-~~-------~~P~~Iavdp~~g-~Lywtd~~~~~~~I~r~~ldG~~~~~l~~~~---l-- 446 (652)
.+.. |+-. .-+.+ ... .. .....|+++|.+. .+|.... ...|+|..=.|..-+.+.... .
T Consensus 95 ~~S~-DgG~-TW~~~-~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~---~~gl~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 95 YVSE-DRGQ-SFTIY-ESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR---TEGIWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEES-STTS-EEEEE-ECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS---SSCEEEESSTTSSCEEETTSCCCCSTT
T ss_pred EEEC-CCCC-cceec-cCCcccCccCCCccceeEEEEcCCCCCEEEEEec---cCCEEEECCCCcccCCCccCccccCCC
Confidence 5442 3211 01222 111 00 1235799999754 5555331 236777654454443322100 0
Q ss_pred CCCceEEEecCC-CEEEEEeCCCCeEEEEecCCC
Q psy5768 447 TMPNALALDHQA-EKLFWGDARLDKIERCDYDGT 479 (652)
Q Consensus 447 ~~P~glaiD~~~-~~LYw~D~~~~~I~~~~ldG~ 479 (652)
.....|++|+.. ++||.+-.....|.+..=.|.
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~ 202 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATAPQGMYVTHDGGV 202 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESSTTCEEEESSTTS
T ss_pred CCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCc
Confidence 112357778654 578877644355665443343
No 467
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=31.41 E-value=4.1e+02 Score=26.55 Aligned_cols=235 Identities=8% Similarity=-0.038 Sum_probs=119.1
Q ss_pred eEEEEeeecceeEEecCCCCCCCCCceeeeeccccceEEEEEEEcCCCeEEEeecccccEEEEeccCCcceEEee-ccCc
Q psy5768 279 AFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLE-RQGS 357 (652)
Q Consensus 279 ~~Ll~s~~~~i~~i~l~~~~~~~~p~~~~~~~~~~~~~~~v~~D~~~~~lywsd~~~~~I~~~~~~g~~~~~i~~-~~~~ 357 (652)
..|-++..+.|+--++..+ . ....+....+-..+.+|+|.+..+.|... ...+.|...++.......... ....
T Consensus 117 n~lAvgld~tV~lWd~~tg-~---~~~~~~~~~~~~~V~sv~fspdg~~lasg-s~Dg~v~iWd~~~~~~~~~~~~h~~~ 191 (420)
T 4gga_A 117 NVLAVALDNSVYLWSASSG-D---ILQLLQMEQPGEYISSVAWIKEGNYLAVG-TSSAEVQLWDVQQQKRLRNMTSHSAR 191 (420)
T ss_dssp SEEEEEETTEEEEEETTTC-C---EEEEEECCSTTCCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CEEEEEeCCEEEEEECCCC-C---EEEEEEecCCCCcEEEEEECCCCCEEEEE-ECCCeEEEEEcCCCcEEEEEeCCCCc
Confidence 3455555555555555222 1 12233322233457899998876655544 445778877776443222222 2223
Q ss_pred eeeeEEEccCCEEEEEeCCCCeEEEEEcCCCCCccEEEEEeCCCCCceEEEEeCCCCEEEEEecCCCCCceEEEeecCCC
Q psy5768 358 VEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFG 437 (652)
Q Consensus 358 ~~glAvDw~~~~LYwtd~~~~~I~~~~~~~~~~~~~~~~~~~~~~~P~~Iavdp~~g~Lywtd~~~~~~~I~r~~ldG~~ 437 (652)
+. ++.|.+..| .+-...+.+...+..... ...............+...|...+|...... . .|....+....
T Consensus 192 v~--~~s~~~~~l-~sgs~d~~i~~~d~~~~~--~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-~--~v~i~~~~~~~ 263 (420)
T 4gga_A 192 VG--SLSWNSYIL-SSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPDGRHLASGGND-N--LVNVWPSAPGE 263 (420)
T ss_dssp EE--EEEEETTEE-EEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETT-S--CEEEEESSCCS
T ss_pred eE--EEeeCCCEE-EEEeCCCceeEeeecccc--eeeEEecccccceeeeeecCCCCeeeeeecc-c--cceEEeecccc
Confidence 34 445545554 455566778777765432 2222222445677888888866655544332 2 34333332211
Q ss_pred -ce-E--EEEcCCCCCceEEEecCCCEEEEEeC--CCCeEEEEecCCCceEEEecCCCCceeEEEEe--CCEEEEEc-CC
Q psy5768 438 -TE-S--IITTDITMPNALALDHQAEKLFWGDA--RLDKIERCDYDGTNRIVLSKISPLHPFDMAVY--GEFIFWTD-WV 508 (652)
Q Consensus 438 -~~-~--l~~~~l~~P~glaiD~~~~~LYw~D~--~~~~I~~~~ldG~~~~~l~~~~~~~p~glav~--~~~lYwtd-~~ 508 (652)
.. . ...........++..+....++.+-. ..+.|...++........+... ..+.++.+. ++.|+.+. ..
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTT
T ss_pred ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecC
Confidence 11 1 11112223456777776666655422 2356777777655444333322 455566554 34555543 24
Q ss_pred CCeEEEEEccCCceEEEEe
Q psy5768 509 IHAVLRANKYTGEEVYTLR 527 (652)
Q Consensus 509 ~~~I~~~~k~~g~~~~~~~ 527 (652)
.+.|..-+..+++.+..+.
T Consensus 343 d~~I~iwd~~~~~~v~~l~ 361 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELK 361 (420)
T ss_dssp TCCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCcEEEEEc
Confidence 4566666666665554443
No 468
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=31.09 E-value=28 Score=24.25 Aligned_cols=28 Identities=25% Similarity=0.479 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCccccccCCCCceeeeccCceee
Q psy5768 548 KTPCRHLNGNCDDICKLDETGQVVCSCFTGKVL 580 (652)
Q Consensus 548 ~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l 580 (652)
.+.|. ||.|-.+ ...+.+.|.|+.||..
T Consensus 13 ~~yC~--nG~C~~~---~~~~~~~C~C~~gy~G 40 (50)
T 1iox_A 13 KHYCI--KGRCRFV---VAEQTPSCVCDEGYIG 40 (50)
T ss_dssp TTSCT--TCCEEEE---TTTTEEEECCCTTEET
T ss_pred cCccc--CCEEEeE---cCCCCeEEECCCCccc
Confidence 36666 4666432 2334789999999975
No 469
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=28.21 E-value=30 Score=24.19 Aligned_cols=16 Identities=31% Similarity=0.893 Sum_probs=12.9
Q ss_pred CceEEEeCCccccCCCccc
Q psy5768 257 SAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 257 ~~~C~C~~G~l~~dg~~C~ 275 (652)
.+.|.|+.|| .|..|.
T Consensus 29 ~~~C~C~~gy---~G~RCe 44 (50)
T 3e50_C 29 KPACVCHSGY---VGARCE 44 (50)
T ss_pred CeEEECCCCC---cccCCC
Confidence 6899999998 466665
No 470
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=28.10 E-value=6.7e+02 Score=29.90 Aligned_cols=41 Identities=17% Similarity=0.399 Sum_probs=25.6
Q ss_pred cceecCCCceEEEe-CCccccCCCcccccceEEEEeeecceeEEe
Q psy5768 250 LCLYNGVSAVCACA-HGVVAQDGKSCSEYDAFIMYSRVNRIDSIH 293 (652)
Q Consensus 250 lC~~~~~~~~C~C~-~G~l~~dg~~C~~~~~~Ll~s~~~~i~~i~ 293 (652)
.|.....+|.|.|+ .|| .|..|.....-.+|..+.......
T Consensus 1030 ~C~~~~~~~~C~C~~~g~---~G~~C~~~~~~~~f~~~~~~v~y~ 1071 (1245)
T 3qcw_A 1030 VCLQQWDGFSCDCSMTSF---SGPLCNDPGTTYIFSKGGGQITYK 1071 (1245)
T ss_dssp EEEEETTEEEEECTTSSC---BSTTSCBCCCEEEEEEEEEEEEEE
T ss_pred EeCCCCCCCEEECCCCCC---CCCCccCCCceEEEcCCCcEEEEe
Confidence 67766778999999 588 578898544333443333333333
No 471
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=28.02 E-value=20 Score=31.63 Aligned_cols=35 Identities=23% Similarity=0.520 Sum_probs=23.1
Q ss_pred CCCCCCCCCCCCCCccccccCCCCceeeeccCceeeccCCcccC
Q psy5768 545 ACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 545 ~~~~~~C~~~ng~Cs~lCl~~~~~~~~C~Cp~g~~l~~d~~C~~ 588 (652)
++..+||.. +| .|..... .++|.|+.||.. ..|..
T Consensus 121 ~c~~~~C~~-~g----~C~~~~~-~~~c~C~~g~~G---~~Ce~ 155 (162)
T 1g1s_A 121 SCQDMSCSK-QG----ECLETIG-NYTCSCYPGFYG---PECEY 155 (162)
T ss_dssp CCCTTGGGG-SE----EEEECSS-SEEEEECTTEES---TTSCE
T ss_pred CCcCCCCCC-CC----EEecCCC-CceEeCCCCCcC---ccccc
Confidence 455677752 23 4555555 699999999985 35664
No 472
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=26.70 E-value=31 Score=40.02 Aligned_cols=15 Identities=33% Similarity=0.899 Sum_probs=13.1
Q ss_pred CeeecCCCCcccCCC
Q psy5768 637 GYFKCDNNKCILSSH 651 (652)
Q Consensus 637 ~~f~C~~~~Ci~~~~ 651 (652)
+.|+|.+|+||+.++
T Consensus 121 ~~F~C~~g~ci~~~~ 135 (913)
T 3t5o_A 121 NKFRCDSGRCIARKL 135 (913)
T ss_dssp SEEECTTSCEEEGGG
T ss_pred cccccCCCceEccce
Confidence 679999999999765
No 473
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=25.99 E-value=14 Score=29.00 Aligned_cols=18 Identities=22% Similarity=0.469 Sum_probs=14.8
Q ss_pred eeeccCceeeccCCcccC
Q psy5768 571 VCSCFTGKVLMEDNRSCT 588 (652)
Q Consensus 571 ~C~Cp~g~~l~~d~~C~~ 588 (652)
-|.|++||++..++.|++
T Consensus 49 GC~C~~G~vr~~~g~CV~ 66 (84)
T 2h9e_C 49 DCVCEEGFYRNKDDKCVS 66 (84)
T ss_dssp -CEECSSCEECTTCCEEC
T ss_pred CCCCCCCeEEcCCCCEEC
Confidence 499999999976688987
No 474
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=25.47 E-value=38 Score=23.60 Aligned_cols=36 Identities=28% Similarity=0.724 Sum_probs=20.4
Q ss_pred CCCCCCC-CCCCcc-cceecC--CCceEEEeCCccccCCCccc
Q psy5768 237 TNPCGVN-NGGCAE-LCLYNG--VSAVCACAHGVVAQDGKSCS 275 (652)
Q Consensus 237 ~n~C~~~-ng~Cs~-lC~~~~--~~~~C~C~~G~l~~dg~~C~ 275 (652)
.+||... ++-|-| .|.... ..+.|.|+.|| .|..|.
T Consensus 9 ~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy---~G~RCe 48 (50)
T 2rnl_A 9 KNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEY---FGERCG 48 (50)
T ss_dssp CCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSC---CSSSCC
T ss_pred CcccCchhhCcCCCCEEEEecCCCCeeEECCCCc---cccccc
Confidence 3566531 233444 465322 25889999998 455553
No 475
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.39 E-value=7.2e+02 Score=27.49 Aligned_cols=142 Identities=9% Similarity=0.017 Sum_probs=72.3
Q ss_pred CCCEEEEEe---cc-----CCcceEEEEEcCC--------CccEEEEeCCCcCCccCCCCcEEEEccCCcEEEEeC--CC
Q psy5768 48 VKGKMFWSN---VT-----KQVVTIEMAFMDG--------TKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDP--KE 109 (652)
Q Consensus 48 ~~~~lyw~d---~~-----~~~~~I~~~~~dg--------s~~~~v~~~~~~~~p~~~~~~lavDw~~~~lY~~d~--~~ 109 (652)
.++++|+.- +. ..+.+|..+++++ ...++++....-..++ .+.|..+.||++-. ..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~l~~~~~~~~~ 371 (711)
T 4hvt_A 298 FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFN------FISTTKDRVFLATYDNVV 371 (711)
T ss_dssp ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEE------EEEECSSCEEEEEEETTE
T ss_pred ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEE------EEEEECCEEEEEEEECCE
Confidence 477888732 10 1466899998875 2345655544122334 34566788887653 44
Q ss_pred CEEEEEEcC-CC-cEEEEEe-CCCCCceeEEEcCCCCeEEEEe--cCCCCeEEEEeCCCCCcEEEEeec-ccCceeEEEe
Q psy5768 110 NVIEVARLT-GQ-YRYVLIS-GGVDQPSALAVDPESGYLFWSE--SGKIPLIARAGLDGKKQTILAQEI-IMPIKDITLD 183 (652)
Q Consensus 110 ~~I~v~~~d-g~-~~~~l~~-~~~~~P~~iavd~~~g~lywtd--~~~~~~I~~~~ldg~~~~~~~~~~-~~~p~gl~lD 183 (652)
.++.+.+++ |. ..+.++. .....-..+.+++..+.++++- ..+.+.+.+.++. .....+.... ...+..+
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~~~~~~~~--- 447 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALYSFDSENY--- 447 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSSCCCGGGE---
T ss_pred EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCcccCcccC---
Confidence 567788764 42 1222121 1112233444555556666553 3346778888887 3333333221 1122333
Q ss_pred ccCCEEEEEeCCCCcEE
Q psy5768 184 LKFFSAFYRNLSKGNIH 200 (652)
Q Consensus 184 ~~~~~ly~~d~~g~~~~ 200 (652)
...++.+...||....
T Consensus 448 -~~e~v~~~s~DG~~i~ 463 (711)
T 4hvt_A 448 -VLEQKEATSFDGVKIP 463 (711)
T ss_dssp -EEEEEEEECTTSCEEE
T ss_pred -eeEEEEEECCCCeEEE
Confidence 2234555556655443
No 476
>1eai_C Protein (chymotrypsin/elastase isoinhibitor 1); serine proteinase, ascaris SUMM, protein inhibitor; 2.40A {Ascaris suum} SCOP: g.22.1.1
Probab=24.23 E-value=44 Score=24.28 Aligned_cols=22 Identities=23% Similarity=0.590 Sum_probs=14.7
Q ss_pred eeeccCc--eeeccCCcccCccccc
Q psy5768 571 VCSCFTG--KVLMEDNRSCTINTVC 593 (652)
Q Consensus 571 ~C~Cp~g--~~l~~d~~C~~~~~~C 593 (652)
-|.|++| |++..+..|++ ...|
T Consensus 37 GC~C~~G~g~vr~~~g~CV~-~~~C 60 (61)
T 1eai_C 37 SCECSPGRGMRRTNDGKCIP-ASQC 60 (61)
T ss_dssp EEECCGGGTEEECTTSCEEE-GGGC
T ss_pred CCCCCCCCcEEECCCCCEec-hhhC
Confidence 5999995 56644577886 3344
No 477
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=22.79 E-value=35 Score=27.13 Aligned_cols=31 Identities=29% Similarity=0.881 Sum_probs=23.5
Q ss_pred CCCCCCCCCCCc--cccccCCCCceeeeccCce
Q psy5768 548 KTPCRHLNGNCD--DICKLDETGQVVCSCFTGK 578 (652)
Q Consensus 548 ~~~C~~~ng~Cs--~lCl~~~~~~~~C~Cp~g~ 578 (652)
..+|..+||||. -.|.......-.|.|...+
T Consensus 46 ~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 46 NMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp TCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 358999999996 3487766457889998764
No 478
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=22.68 E-value=26 Score=31.97 Aligned_cols=28 Identities=29% Similarity=0.840 Sum_probs=18.3
Q ss_pred CCcccceecCC---CceEEEeCCccccCCCcccc
Q psy5768 246 GCAELCLYNGV---SAVCACAHGVVAQDGKSCSE 276 (652)
Q Consensus 246 ~Cs~lC~~~~~---~~~C~C~~G~l~~dg~~C~~ 276 (652)
.|.+-|...+. -.+|.|+.|| .|..|..
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw---~G~~C~~ 180 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGF---HGPHCEG 180 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTC---BTTTTCB
T ss_pred ccCCCCCCCCEeCCCCcccCcCCC---CCCCCcC
Confidence 45555554332 3689999998 4777763
Done!