RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5768
(652 letters)
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 159 bits (403), Expect = 4e-45
Identities = 56/265 (21%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 280 FIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTIN 339
+++++ +I+ + + +++ + K II L++D K ++++DI + +I
Sbjct: 3 HLLFAQTGKIERLPL-ERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIG 61
Query: 340 SVFFNGSNHRVLLERQ-GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRL 398
+G ++ + GS EG+A +++ ++WT + I +D + + +
Sbjct: 62 RASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD--- 118
Query: 399 GQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALALDHQA 458
PRGI D +YWT+WN P I+ + G + ++ +PN L D +
Sbjct: 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFS 178
Query: 459 EKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKY 518
+L W DA + E + R + + +PF + YG+ +++TDW ++V+ +
Sbjct: 179 SQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSYGKNLYYTDWKTNSVIAMDLA 237
Query: 519 TGEEVYTLRKNIR-RPMGIVAISDN 542
+E+ T + + R GI
Sbjct: 238 ISKEMDTFHPHKQTRLYGITIALSQ 262
Score = 82.6 bits (203), Expect = 3e-18
Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 12/232 (5%)
Query: 9 TQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAF 68
KI LE ++ I +A V ++W+++++ +I A
Sbjct: 8 QTGKIERLPLERNTMKKT-EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEP--SIGRAS 64
Query: 69 MDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG 128
+ G + T++ Q IA+D + + I+W+D + + IEVA++ G R VL
Sbjct: 65 LHGGEPTTIIRQDLG-----SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT 119
Query: 129 GVDQPSALAVDPESGYLFWSESGK-IPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFF 187
G+ P + DP G L+W++ + P I + +DG + ILAQ+ + +T D
Sbjct: 120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSS 179
Query: 188 SAFYRNLSKGNIHIISL--SNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGT 237
+ + ++ V P+ + +Y D +T +
Sbjct: 180 QLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGK-NLYYTDWKTNS 230
Score = 45.6 bits (107), Expect = 7e-06
Identities = 15/143 (10%), Positives = 39/143 (27%), Gaps = 17/143 (11%)
Query: 1 MFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ 60
++ + KI +++G + L + + ++ W +
Sbjct: 136 LYWTDWNRDNPKIETSHMDGTNRRI------LAQDNLGLPNGLTFDAFSSQLCWVDAGTH 189
Query: 61 VVTIEMAFMDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVA-RLTG 119
E R V+ +YP + +N+Y++D K N +
Sbjct: 190 --RAECLNPAQPGRRKVLEGLQYP------FAVTSY--GKNLYYTDWKTNSVIAMDLAIS 239
Query: 120 QYRYVLISGGVDQPSALAVDPES 142
+ + + +
Sbjct: 240 KEMDTFHPHKQTRLYGITIALSQ 262
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 156 bits (394), Expect = 6e-44
Identities = 68/267 (25%), Positives = 135/267 (50%), Gaps = 18/267 (6%)
Query: 279 AFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTI 338
A++ ++ + + + + D+S+ S + ++N++ L + +++SD+ + I
Sbjct: 2 AYLFFTNRHEVRKMTL-DRSEYTSLIPN------LRNVVALDTEVASNRIYWSDLSQRMI 54
Query: 339 NSVFFNGSNH-----RVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRI 393
S + ++ V+ + +GLA +++H+ +YWT + T++ D K + +
Sbjct: 55 CSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 114
Query: 394 VVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTESIITTDITMPNALA 453
KPR I +D +YWT+W + I++ +G S++T +I PN +
Sbjct: 115 FRENG---SKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGIT 170
Query: 454 LDHQAEKLFWGDARLDKIERCDYDGTNR--IVLSKISPLHPFDMAVYGEFIFWTDWVIHA 511
LD + +L+W D++L I D +G NR I+ + HPF +AV+ + +FWTD + A
Sbjct: 171 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEA 230
Query: 512 VLRANKYTGEEVYTLRKNIRRPMGIVA 538
+ AN+ TG +V L +N+ P +V
Sbjct: 231 IFSANRLTGSDVNLLAENLLSPEDMVL 257
Score = 75.3 bits (184), Expect = 1e-15
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 24/245 (9%)
Query: 9 TQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAF 68
+ ++ L+ T+++ N N + ++ +++WS+++++ I
Sbjct: 8 NRHEVRKMTLDRSEYTSLIPNLRN-------VVALDTEVASNRIYWSDLSQR--MICSTQ 58
Query: 69 MDGTKRETVVSQKKYPAVTACNLHIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG 128
+D + + A + +AVDWI NIYW+D + VA G R L
Sbjct: 59 LDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE 117
Query: 129 GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFS 188
+P A+ VDP G+++W++ G I + GL+G L E I ITLDL
Sbjct: 118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 177
Query: 189 AFYR----------NLSKGNIHIISLSNLSDVSTISMKPYGDS-YLKDI---KIYSKDAQ 234
++ +++ GN I S+ + D + DI I+S +
Sbjct: 178 LYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL 237
Query: 235 TGTNP 239
TG++
Sbjct: 238 TGSDV 242
Score = 42.6 bits (99), Expect = 8e-05
Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 32 NDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYPAVTACNL 91
T + + I + + G+++W + +I ++G R+T++ +K
Sbjct: 158 LVTENIQWPNGITLDLLSGRLYWVDSKLH--SISSIDVNGGNRKTILEDEKR-----LAH 210
Query: 92 HIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAV 138
++ ++W+D I A L++ + P + +
Sbjct: 211 PFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 257
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 52.1 bits (125), Expect = 9e-10
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 236 GTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSC 274
GTN C NNGGC+ +C + C C G + C
Sbjct: 1 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 39
Score = 37.0 bits (86), Expect = 2e-04
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 550 PCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
C NG C +C D C C G L+ R C
Sbjct: 4 ECLDNNGGCSHVC-NDLKIGYECLCPDGFQLV-AQRRC 39
>d1d2la_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 50.2 bits (120), Expect = 5e-09
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCA 630
C +F C++ CI CD +C D SDE C
Sbjct: 6 CQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCH 43
Score = 30.5 bits (69), Expect = 0.048
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 632 RDCRPGYFKCDNNKCILSSH 651
C+PG F C N++CI
Sbjct: 4 PQCQPGEFACANSRCIQERW 23
>d2fcwb2 g.12.1.1 (B:125-163) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 49.0 bits (117), Expect = 1e-08
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
C F+C+ CIP CD +C D SDE C
Sbjct: 3 CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 29.0 bits (65), Expect = 0.16
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 634 CRPGYFKCDNNKCILSS 650
C P F+C+++ CI
Sbjct: 3 CGPASFQCNSSTCIPQL 19
>d1f5ya1 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 48.7 bits (116), Expect = 1e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 587 CTINTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
+ C ++F+C DG CI + CD C D SDE C
Sbjct: 2 SAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 28.2 bits (63), Expect = 0.24
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 634 CRPGYFKCDNNKCILSS 650
C F+C + KCI
Sbjct: 8 CERNEFQCQDGKCISYK 24
>d1j8ea_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 47.8 bits (114), Expect = 3e-08
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 590 NTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYCAMR 632
+ CS FKC+ G CIP + TCD +C D SDE C +
Sbjct: 2 SHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQ 44
Score = 29.7 bits (67), Expect = 0.078
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 632 RDCRPGYFKCDNNKCILSS 650
C FKC++ +CI
Sbjct: 3 HSCSSTQFKCNSGRCIPEH 21
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 47.5 bits (113), Expect = 5e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
C + NG C+ C + C C G L+ D SCT
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 39
Score = 45.2 bits (107), Expect = 3e-07
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 240 CGVNNGGCAELCLYN-GVSAVCACAHG-VVAQDGKSCSEYDAF 280
C NGGC + C + G C C G + DG SC+ +
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 47.0 bits (112), Expect = 6e-08
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
CS+ +F+C DG CI CD +C D SDE
Sbjct: 3 CSQAEFRCHDGKCISRQFVCDSDRDCLDGSDE 34
Score = 30.1 bits (68), Expect = 0.049
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 632 RDCRPGYFKCDNNKCILSS 650
+ C F+C + KCI
Sbjct: 1 KTCSQAEFRCHDGKCISRQ 19
>d1xfea2 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 47.1 bits (112), Expect = 6e-08
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 589 INTVCSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
+ + FKC G CI ++ C+ +C D SDE I C
Sbjct: 3 VTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 25.5 bits (56), Expect = 2.6
Identities = 6/18 (33%), Positives = 8/18 (44%)
Query: 634 CRPGYFKCDNNKCILSSH 651
P FKC + +CI
Sbjct: 7 EGPNKFKCHSGECITLDK 24
>d1f8za_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 47.0 bits (112), Expect = 6e-08
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
C +F+CSDG CI ++ CDR Y+C D SDE
Sbjct: 3 CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 34
Score = 28.1 bits (63), Expect = 0.24
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 634 CRPGYFKCDNNKCILSS 650
CRP F+C + CI S
Sbjct: 3 CRPDEFQCSDGNCIHGS 19
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 46.7 bits (111), Expect = 1e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 240 CGVNNGGCAELCLYNGVSAVCACAHG-VVAQDGKSCSEYDAF 280
C ++NGGC CL C+CA G + D C F
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43
Score = 44.0 bits (104), Expect = 9e-07
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
C NG C C L+E G CSC G L +D C
Sbjct: 2 CSLDNGGCTHYC-LEEVGWRRCSCAPGYKLGDDLLQC 37
>d1ajja_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 37
Score = 46.3 bits (110), Expect = 1e-07
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 593 CSEHDFKCSDGMCIPFNQTCDRVYNCHDKSDE 624
CS +F C G CI + CD +C DKSDE
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDE 33
Score = 28.9 bits (65), Expect = 0.14
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 634 CRPGYFKCDNNKCILSS 650
C F C + +CI SS
Sbjct: 2 CSAFEFHCLSGECIHSS 18
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 46.4 bits (110), Expect = 1e-07
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 240 CGVNNGGCAELCLYNGVSAVCACAHG-VVAQDGKSCSEYDAF 280
C ++NGGC + C C+CAHG V+ D KSC + F
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42
Score = 43.7 bits (103), Expect = 1e-06
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCS 594
C NG CD C +E +V CSC G VL +D++SC
Sbjct: 1 CSLDNGGCDQFC-REERSEVRCSCAHGYVLGDDSKSCVSTERFP 43
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 46.3 bits (110), Expect = 1e-07
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
C NG C+ CK +VVCSC G L E+ +SC
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCE 40
Score = 46.0 bits (109), Expect = 2e-07
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 240 CGVNNGGCAELCLYN-GVSAVCACAHG-VVAQDGKSCSEYDAF 280
C + NG C + C + VC+C G +A++ KSC F
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 45.6 bits (108), Expect = 2e-07
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 240 CGVNNGGCAELCLYNGVSAVCACAHG-VVAQDGKSCSEYDAF 280
C ++NG C + C S VC+CA G +A +GK+C +
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 44
Score = 44.4 bits (105), Expect = 6e-07
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
C NG+CD C +E VVCSC G L ++ ++C
Sbjct: 3 CSLDNGDCDQFC-HEEQNSVVCSCARGYTLADNGKACI 39
>d2gtlm2 g.12.1.1 (M:60-101) Hemoglobin linker chain l1 {Common
earthworm (Lumbricus terrestris) [TaxId: 6398]}
Length = 42
Score = 42.5 bits (100), Expect = 2e-06
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 593 CSEHDFKCSD--GMCIPFNQTCDRVYNCHDKSDEGILYCA 630
C EH+ +C CI CD +C D SDE C+
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
Score = 24.1 bits (52), Expect = 8.2
Identities = 4/19 (21%), Positives = 7/19 (36%), Gaps = 2/19 (10%)
Query: 634 CRPGYFKCDNN--KCILSS 650
C +C + +CI
Sbjct: 3 CDEHESECRGDVPECIHDL 21
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 42.1 bits (99), Expect = 3e-06
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 593 CSEHDFKC-SDGMCIPFNQTCDRVYNCHDKSDE 624
C +F+C DG+CIP CD +C D SDE
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 36
Score = 24.4 bits (53), Expect = 5.8
Identities = 5/18 (27%), Positives = 7/18 (38%), Gaps = 1/18 (5%)
Query: 634 CRPGYFKC-DNNKCILSS 650
C F+C + CI
Sbjct: 4 CHTDEFQCRLDGLCIPLR 21
>d1f5ya2 g.12.1.1 (A:45-85) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 42.1 bits (99), Expect = 3e-06
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 589 INTVCSEHDFKCSD--GMCIPFNQTCDRVYNCHDKSDE 624
++ C DF C CIP CD +C + SDE
Sbjct: 1 LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 24.0 bits (52), Expect = 9.2
Identities = 7/19 (36%), Positives = 9/19 (47%), Gaps = 2/19 (10%)
Query: 634 CRPGYFKCD--NNKCILSS 650
C+ G F C N+CI
Sbjct: 5 CKSGDFSCGGRVNRCIPQF 23
>d2gtlo2 g.12.1.1 (O:60-100) Extracellular hemoglobin linker l3
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 41.3 bits (97), Expect = 6e-06
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 593 CSEHDFKC--SDGMCIPFNQTCDRVYNCHDKSDE 624
C EH+ +C D CI CD +C + DE
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 24.0 bits (52), Expect = 9.3
Identities = 5/19 (26%), Positives = 8/19 (42%), Gaps = 2/19 (10%)
Query: 634 CRPGYFKC--DNNKCILSS 650
C +C D+ +CI
Sbjct: 3 CDEHEHQCGGDDPQCISKL 21
>d1v9u5_ g.12.1.1 (5:) Very low-density lipoprotein receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 40.6 bits (95), Expect = 1e-05
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 593 CSEHDFKCSDG--MCIPFNQTCDRVYNCHDKSDE 624
C H+ C CIP + CD +C DE
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 24.0 bits (52), Expect = 8.3
Identities = 6/19 (31%), Positives = 8/19 (42%), Gaps = 2/19 (10%)
Query: 634 CRPGYFKCDNN--KCILSS 650
CR C + +CI S
Sbjct: 1 CRIHEISCGAHSTQCIPVS 19
>d2gtln2 g.12.1.1 (N:61-101) Extracellular hemoglobin linker l2
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 40.6 bits (95), Expect = 1e-05
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 593 CSEHDFKC--SDGMCIPFNQTCDRVYNCHDKSDEGILYC 629
C + F+C ++ CI CD +CH+ DE C
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 24.5 bits (53), Expect = 6.4
Identities = 6/19 (31%), Positives = 8/19 (42%), Gaps = 2/19 (10%)
Query: 634 CRPGYFKCDNN--KCILSS 650
C F+C N +CI
Sbjct: 2 CEKRTFQCGGNEQECISDL 20
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 39.5 bits (92), Expect = 3e-05
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 238 NPCGVNNGGCAELCLYN------GVSAVCACAHG-VVAQDGKSC 274
++NGGC LCL CAC G ++A+D +SC
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
Score = 35.3 bits (81), Expect = 0.001
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 5/42 (11%)
Query: 551 CRHLNGNCDDICKLDET-----GQVVCSCFTGKVLMEDNRSC 587
NG C +C + C+C G +L D RSC
Sbjct: 7 TTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
>d1k7ba_ g.12.1.1 (A:) soluble Tva ectodomain, sTva47 {Quail
(Coturnix coturnix) [TaxId: 9091]}
Length = 42
Score = 39.1 bits (91), Expect = 4e-05
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 593 CSEHDFKCSD-----GMCIPFNQTCDRVYNCHDKSDE 624
C F+CS+ G C P + CD +C D DE
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 37.1 bits (86), Expect = 2e-04
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTIN 590
+ C + C C + G CSC L +D ++C +N
Sbjct: 1 NECTDFV----DVPCSHFC-NNFIGGYFCSCPPEYFLHDDMKNCGVN 42
Score = 31.8 bits (72), Expect = 0.018
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 242 VNNGGCAELCLYNGVSAVCACAHG-VVAQDGKSC 274
+ C+ C C+C + D K+C
Sbjct: 6 FVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 35.5 bits (82), Expect = 7e-04
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 555 NGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
C +C ++ G C C G L ++C
Sbjct: 7 PDTCSQLC-VNLEGGYKCQCEEGFQLDPHTKAC 38
Score = 32.8 bits (75), Expect = 0.005
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 238 NPCGVNNGGCAELCLYNGVSAVCACAHG-VVAQDGKSC 274
+ C + C++LC+ C C G + K+C
Sbjct: 2 DEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 38
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 34.1 bits (78), Expect = 0.002
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 551 CRHLNGN---CDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
C+ G CD C + G CSC G VL + R+C+
Sbjct: 4 CQVAPGEAPTCDHHC-HNHLGGFYCSCRAGYVLHRNKRTCS 43
Score = 32.9 bits (75), Expect = 0.007
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 238 NPCGVNNG---GCAELCLYNGVSAVCACAHG-VVAQDGKSCSE 276
+ C V G C C + C+C G V+ ++ ++CSE
Sbjct: 2 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens
[TaxId: 358]}
Length = 295
Score = 37.7 bits (86), Expect = 0.003
Identities = 16/186 (8%), Positives = 50/186 (26%), Gaps = 3/186 (1%)
Query: 321 YDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATI 380
+D T ++ +I + ++ + V + + + ++ +
Sbjct: 25 FDPASGTAWWFNILERELHELHLASGRKTVH--ALPFMGSALAKISDSKQLIASDDGLFL 82
Query: 381 NKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSIQRAFFSGFGTES 440
+ ++ + + T + G +
Sbjct: 83 RDTATGVLT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT 141
Query: 441 IITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGE 500
+ DI++PN++ ++ D +++++ R D + K G
Sbjct: 142 KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM 201
Query: 501 FIFWTD 506
D
Sbjct: 202 DGSVCD 207
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 33.0 bits (75), Expect = 0.007
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 551 CRHLNGN---CDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
CR G+ CD C + G CSC G +L ++ +C+
Sbjct: 4 CRTSLGDSVPCDHYC-HNYLGGYYCSCRVGYILHQNKHTCS 43
Score = 31.0 bits (70), Expect = 0.028
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 238 NPCGVNNGG---CAELCLYNGVSAVCACAHG-VVAQDGKSCS 275
+ C + G C C C+C G ++ Q+ +CS
Sbjct: 2 DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS 43
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 32.5 bits (74), Expect = 0.007
Identities = 8/41 (19%), Positives = 12/41 (29%), Gaps = 1/41 (2%)
Query: 235 TGTNPCGVNNGGCAELCLYNGVSAVCACAHG-VVAQDGKSC 274
T N C + C+ S +C C + C
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41
Score = 30.6 bits (69), Expect = 0.036
Identities = 7/38 (18%), Positives = 10/38 (26%), Gaps = 1/38 (2%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
C C ++ G +C C L C
Sbjct: 6 CLDPTTCISGNC-VNTPGSYICDCPPDFELNPTRVGCV 42
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 34.5 bits (77), Expect = 0.037
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 369 YLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWNSH 424
+ Y + I+ ID+ S K V + P G I +++Y N +S+
Sbjct: 3 FAYIANSESDNISVIDVTSNK----VTATIPVGSNPMGAVISPDGTKVYVANAHSN 54
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 34.4 bits (77), Expect = 0.040
Identities = 34/328 (10%), Positives = 71/328 (21%), Gaps = 34/328 (10%)
Query: 99 AQNIYWSDPKENVIEVARL--TGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 156
Q +Y + P+ I V L G + Q + V P+ YL+
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP----- 57
Query: 157 ARAGLDGKKQTILAQEIIMPIKDITLDLKFFSAFYRNLSKGNIHIISLSNLSDVSTISMK 216
+ +LA I +T + ++ IS
Sbjct: 58 --------EFRVLAYRIAPDDGALTFAAESALP------------------GSLTHISTD 91
Query: 217 PYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSCSE 276
G + T L SA + + +
Sbjct: 92 HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR 151
Query: 277 YDAFIMYSRVNRIDSIHMTDKSDLNSPFESIRNSTMMKNIIELSYDYKRKTLFYSDIQKG 336
F + + + + + + + ++ ++ G
Sbjct: 152 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG 211
Query: 337 TINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
+ +LY + I + +
Sbjct: 212 -NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 270
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSH 424
+PRG ++D + SH
Sbjct: 271 FQPTETQPRGFNVDHSGKYLIAAGQKSH 298
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 31.1 bits (70), Expect = 0.045
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 542 NLDACAKTPCRHLNGNCDDICKLDETGQVVCSCFTG 577
KT C + G C + L + +C C G
Sbjct: 5 KCAEKEKTFCVN-GGECFMVKDLSNPSRYLCKCQPG 39
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 30.7 bits (69), Expect = 0.048
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 544 DACA---KTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCT 588
D CA K+ C +C + G CSC G L ED SC
Sbjct: 5 DECASRSKSGEEDPQPQCQHLC-HNYVGGYFCSCRPGYELQEDRHSCQ 51
Score = 26.9 bits (59), Expect = 1.0
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 234 QTGTNPCGVN-NGGCAELCLYNGVSAVCACAHG-VVAQDGKSCS 275
+ + + C LC C+C G + +D SC
Sbjct: 8 ASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 32.9 bits (73), Expect = 0.093
Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 97 WIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG 151
A +Y ++ N + VL G++ P A+AVD + ++ ++ G
Sbjct: 190 DEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD-RTVYVADRG 243
Score = 31.7 bits (70), Expect = 0.23
Identities = 18/153 (11%), Positives = 40/153 (26%), Gaps = 2/153 (1%)
Query: 363 YEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWTNWN 422
+ + A + D + D+ +
Sbjct: 98 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTD 157
Query: 423 SHLPSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCDYDGTNRI 482
+ + + + TDIT P +A+D +++ + T
Sbjct: 158 TDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT-NQVVKLLAGSTTST 216
Query: 483 VLSKISPLHPFDMAVYGE-FIFWTDWVIHAVLR 514
VL P +AV + ++ D V++
Sbjct: 217 VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVK 249
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 29.0 bits (65), Expect = 0.15
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 551 CRHLNGNCDD-ICKLDETGQVVCSCFTGKVLMEDNRSC 587
C+ L G C C ++ G C C TG L ED R C
Sbjct: 6 CQELPGLCQGGKC-INTFGSFQCRCPTGYYLNEDTRVC 42
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 32.4 bits (72), Expect = 0.16
Identities = 16/157 (10%), Positives = 34/157 (21%), Gaps = 7/157 (4%)
Query: 502 IFWTDWVIHAVLRANKYTGEEVYTLRKNIRRPMGI-------VAISDNLDACAKTPCRHL 554
+F D + + N T E + P I + + D +
Sbjct: 53 LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 112
Query: 555 NGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMCIPFNQTCDR 614
N D++ + E + T S + + F
Sbjct: 113 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 172
Query: 615 VYNCHDKSDEGILYCAMRDCRPGYFKCDNNKCILSSH 651
+ N + + ++ L
Sbjct: 173 IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 209
Score = 31.6 bits (70), Expect = 0.27
Identities = 24/226 (10%), Positives = 57/226 (25%), Gaps = 16/226 (7%)
Query: 357 SVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRI 416
+EGL ++ L+ + I KI+ ++ + +R V P I I D R+
Sbjct: 41 QLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKAN---PAAIKIHK-DGRL 95
Query: 417 YWTNWNSHLPSIQRAFFSGFGTESIITTD----ITMPNALALDHQAEKLFWGDARLDKIE 472
+ + + G + + + D + F
Sbjct: 96 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 155
Query: 473 RCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRR 532
+ + + +A + AN+ + I+
Sbjct: 156 LGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP 215
Query: 533 PMGIVAISDNLDACAKTPCRHLNGNC-------DDICKLDETGQVV 571
+ + C + N + ++ G +
Sbjct: 216 FGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPI 261
Score = 29.7 bits (65), Expect = 1.1
Identities = 6/72 (8%), Positives = 14/72 (19%), Gaps = 1/72 (1%)
Query: 93 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 152
+ D ++ D E I + P+A+ + +
Sbjct: 45 LNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF 103
Query: 153 IPLIARAGLDGK 164
Sbjct: 104 KSTGGIFAATEN 115
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 32.4 bits (72), Expect = 0.17
Identities = 13/129 (10%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Query: 360 GLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDIDSCDSRIYWT 419
G A + H Y+ N ++ +D+ S + + P + + Y
Sbjct: 1 GPALKAGHEYMI-VTNYPNNLHVVDVASDTVYK--SCVMPDKFGPGTAMMAPDNRTAYVL 57
Query: 420 NWNSHLPSI----QRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGDARLDKIERCD 475
N + S+ + A+ ++++ ++
Sbjct: 58 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117
Query: 476 YDGTNRIVL 484
R+ +
Sbjct: 118 VVKPPRLEV 126
Score = 29.7 bits (65), Expect = 0.98
Identities = 12/80 (15%), Positives = 20/80 (25%), Gaps = 3/80 (3%)
Query: 348 HRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVV---VRLGQHDKP 404
++ + + Y N+ I IDLD+ K V
Sbjct: 32 KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSM 91
Query: 405 RGIDIDSCDSRIYWTNWNSH 424
I +Y T +
Sbjct: 92 YSFAISPDGKEVYATVNPTQ 111
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 28.3 bits (63), Expect = 0.29
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 551 CRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSC 587
C+ C + G C C G L + +C
Sbjct: 5 CQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 27.3 bits (61), Expect = 0.53
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 16/51 (31%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSC---FTGKVLMEDNRSCTINT 591
+ C PC++ + C LD+ G+ C C + G C +NT
Sbjct: 2 NECVSNPCQN-DATC-----LDQIGEFQCICMPGYEGV-------HCEVNT 39
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 27.3 bits (61), Expect = 0.55
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 16/51 (31%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSC---FTGKVLMEDNRSCTINT 591
D C +PC++ G C D G+ C+C F GK +C + T
Sbjct: 1 DQCETSPCQN-QGKC-----KDGLGEYTCTCLEGFEGK-------NCELFT 38
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 27.4 bits (61), Expect = 0.58
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 6/34 (17%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTG 577
+C C G C L+ G CSC+ G
Sbjct: 2 ASCQDMSCSK-QGEC-----LETIGNYTCSCYPG 29
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 26.7 bits (59), Expect = 0.92
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 6/34 (17%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTG 577
AC T C +G C ++ C C G
Sbjct: 2 AACTNTSCSG-HGEC-----VETINNYTCKCDPG 29
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 26.3 bits (58), Expect = 1.3
Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 238 NPCGVNNGGCAELCLYNGVSAVCACAHGVVAQDGKSC 274
+ C + C+ S C C G + G C
Sbjct: 6 DECKEPDVCKHGQCINTDGSYRCECPFGYI-LAGNEC 41
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 26.4 bits (58), Expect = 1.4
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSCFTG 577
C H +G C ++ + C+C G
Sbjct: 5 PLSHDGYCLH-DGVCMY---IEALDKYACNCVVG 34
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 25.9 bits (57), Expect = 2.0
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 243 NNGGCAELCLYNGVSAVCACAHG--VVAQDGKSC 274
N G C+ +C + C C + Q G C
Sbjct: 7 NGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 28.7 bits (64), Expect = 2.5
Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 8/92 (8%)
Query: 337 TINSVFFNGSNHRVLLERQGSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVV 396
+ + NG H + Y YL+ + + +I LD K +I +
Sbjct: 59 GGDQQYLNGDCHHP------HISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHI 112
Query: 397 RLGQHDKPRGIDIDSCDSRIYWTNWNSHLPSI 428
Q G+ + Y +
Sbjct: 113 PNVQ--AIHGLRLQKVPKTNYVFCNAEFVIPQ 142
Score = 26.8 bits (59), Expect = 8.9
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Query: 356 GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDI 409
G+++ +Y Y TC N + + VVV + R
Sbjct: 176 GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVV----FNVERIAAA 225
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 28.8 bits (63), Expect = 2.6
Identities = 25/229 (10%), Positives = 58/229 (25%), Gaps = 29/229 (12%)
Query: 368 NYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQHDKPRGIDID---------SCDSRIYW 418
N T + I +D DS K +V + + D+RI
Sbjct: 32 NLFSVTLRDAGQIALVDGDSKK----IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDM 87
Query: 419 TNWNSHLPSIQRAFFSGFGTESIITTDITMP---NALALDHQAEKLFWGDARLDKIERCD 475
+ + P+ G S+ ++ +A + + D + ++
Sbjct: 88 IDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 147
Query: 476 YDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVLRANKYTGEEVYTLRKNIRRP-M 534
+ P + +++ K TG+ + K+I +
Sbjct: 148 STRGMTVDTQTYHPEPRVAAIIASH--EHPEFI-----VNVKETGKVLLVNYKDIDNLTV 200
Query: 535 GIVAISDNLDACAKTPCRHLN-----GNCDDICKLDETGQVVCSCFTGK 578
+ + L + + ++ GK
Sbjct: 201 TSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 249
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 28.6 bits (62), Expect = 2.6
Identities = 17/168 (10%), Positives = 37/168 (22%), Gaps = 10/168 (5%)
Query: 356 GSVEGLAYEYVHNYLYWTCNNDATINKIDLDSPKAQRIVVVRLGQH--DKPRGIDIDSCD 413
+ Y T N ++ KIDL + + + + + G +
Sbjct: 34 PTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG 93
Query: 414 SRIYWTNWNSHL--------PSIQRAFFSGFGTESIITTDITMPNALALDHQAEKLFWGD 465
+ L P+ + + + LA KL+
Sbjct: 94 KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG 153
Query: 466 ARLDKIERCDYDGTNRIVLSKISPLHPFDMAVYGEFIFWTDWVIHAVL 513
L ++ + V + + A
Sbjct: 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP 201
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 25.5 bits (56), Expect = 2.6
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 9/39 (23%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSC----FTGK 578
+ C PC++ G C Q C C F G+
Sbjct: 2 NPCCSNPCQN-RGECMS----TGFDQYKCDCTRTGFYGE 35
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 28.3 bits (62), Expect = 3.0
Identities = 28/310 (9%), Positives = 69/310 (22%), Gaps = 29/310 (9%)
Query: 129 GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDLKFFS 188
+ S + D E ++ + K A + + I + D +
Sbjct: 38 QDEPISWMTFDHERKNIYGAAMKKWSSFAVKS-PTEIVHEASHPIGGHPRANDADTNTRA 96
Query: 189 AFYRNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGV-----N 243
F + + + ++ ++ + + + + Q T G+
Sbjct: 97 IFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE 156
Query: 244 NGGCAELCLYNGVSAVCACAHGVVAQDGKSCSEYDAFIMYSRVNRIDSIHMTDKSDLNSP 303
+ N + A G V G + + N
Sbjct: 157 TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR---------WVAMHPTGNYL 207
Query: 304 FESIRNSTMMKNIIELSYDYKRKTLFYSDIQKGTINSVFFNGSNHRVLLERQGSVEGLAY 363
+ + I E D Y+ I + + V L +
Sbjct: 208 YALMEAG---NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF 264
Query: 364 EYVHNYLYWTCNNDATINKIDLDSPK--------AQRIVVVRLGQHDKPRGIDIDSCDSR 415
Y++ + + + + K Q + +
Sbjct: 265 S--GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322
Query: 416 -IYWTNWNSH 424
+ T+
Sbjct: 323 WMAITDDQEG 332
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 25.0 bits (55), Expect = 3.4
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 9/40 (22%)
Query: 542 NLDACAKTPCRHLNGNCDDICKLDETGQVVCSC---FTGK 578
+ D C PC + G+C D+ C C F GK
Sbjct: 2 DGDQCESNPCLN-GGSC-----KDDINSYECWCPFGFEGK 35
>d1gtza_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase
{Streptomyces coelicolor [TaxId: 1902]}
Length = 149
Score = 27.2 bits (60), Expect = 3.9
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Query: 192 RNLSKGNIHIISLSNLSDVSTISMKPYGDSYLKDIKIYSKDAQTGTNPCGVNNGGCAELC 251
R+L+ I I++ NL+ + + YG L D++ A +GG +
Sbjct: 1 RSLANAPIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAA-------AHGGTVDFR 53
Query: 252 LYNGVSAVCACAH 264
N + H
Sbjct: 54 QSNHEGELVDWIH 66
>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3
Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 27.0 bits (58), Expect = 4.1
Identities = 11/104 (10%), Positives = 20/104 (19%), Gaps = 3/104 (2%)
Query: 546 CAKTPCRHLNGNCDDICKLDETGQVVCSCFTGKVLMEDNRSCTINTVCSEHDFKCSDGMC 605
C C + D+ +C K + +
Sbjct: 30 CNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRHFNDSGACVPRCPQPLVYNKLTFQLE 89
Query: 606 IPFNQTCDRVYNCHDKSDEGILYCA---MRDCRPGYFKCDNNKC 646
+ C + +R C P + D N
Sbjct: 90 PNPHTKYQYGGVCVASCPHNFVVDQTSCVRACPPDKMEVDKNGL 133
>d1kjsa_ a.50.1.1 (A:) C5a anaphylotoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 74
Score = 25.9 bits (57), Expect = 4.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 600 CSDGMCIPFNQTCDR 614
C DG C+ ++TC++
Sbjct: 22 CYDGACVNNDETCEQ 36
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 24.4 bits (53), Expect = 5.8
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 9/40 (22%)
Query: 543 LDACAKTPCRHLNGNCDDICKLDETGQVVCSC----FTGK 578
++ C PC+H G C + C C ++G
Sbjct: 2 VNPCCYYPCQH-QGICVR----FGLDRYQCDCTRTGYSGP 36
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 24.4 bits (53), Expect = 8.4
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 10/38 (26%)
Query: 544 DACAKTPCRHLNGNCDDICKLDETGQVVCSC---FTGK 578
CA C +G C +D G C C + G+
Sbjct: 9 HPCASLCC--GHGTC-----IDGIGSFSCDCRSGWEGR 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.420
Gapped
Lambda K H
0.267 0.0666 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,512,887
Number of extensions: 124568
Number of successful extensions: 504
Number of sequences better than 10.0: 1
Number of HSP's gapped: 435
Number of HSP's successfully gapped: 119
Length of query: 652
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 561
Effective length of database: 1,158,166
Effective search space: 649731126
Effective search space used: 649731126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.5 bits)