BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5769
(365 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|67043769|gb|AAY63983.1| succinate dehydrogenase iron sulfur subunit B [Lysiphlebus
testaceipes]
Length = 279
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/272 (63%), Positives = 197/272 (72%), Gaps = 56/272 (20%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
K +RSF +SA ++ A+ KTF+IYRWNPDKPD+KPTMQEYKVDLN
Sbjct: 13 KQVRSFHVSAVQNAE------ARLKTFSIYRWNPDKPDDKPTMQEYKVDLNKCGPMVLDA 66
Query: 150 -----NKIDAN-----------------------------------DKVSKIYPLPHMYV 169
N+ID + K SKIYPLPHMY+
Sbjct: 67 LIKIKNEIDPSLTFRRSCREGICGSCAMNIGGTNTLACISKIDNDTSKKSKIYPLPHMYI 126
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPDM+NFYAQYKSIQPWLQRD + +G QYLQS++DRKKLDGLYECILCACCSTS
Sbjct: 127 VKDLVPDMSNFYAQYKSIQPWLQRDDNKKVGTQQYLQSVEDRKKLDGLYECILCACCSTS 186
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD KT DRL++L+DPFSVYRCHTIMNCTRTCPK
Sbjct: 187 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDTKTTDRLDKLRDPFSVYRCHTIMNCTRTCPK 246
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALH 320
GLNPG+AI+EIKKLL +++K KPGLDT ALH
Sbjct: 247 GLNPGKAISEIKKLLGSVIEKGKPGLDTTALH 278
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIGG NTLACISKID + K SKIYPL
Sbjct: 62 MVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIGGTNTLACISKIDNDTSKKSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPDM+NFYAQYKSIQ PW
Sbjct: 122 PHMYIVKDLVPDMSNFYAQYKSIQ-----PW 147
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID + K SKIYPLPHMY+VKDLVPDM+NFYAQYKSIQPWL R
Sbjct: 103 ACISKIDNDTSKKSKIYPLPHMYIVKDLVPDMSNFYAQYKSIQPWLQR 150
>gi|383865283|ref|XP_003708104.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Megachile rotundata]
Length = 277
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/270 (61%), Positives = 193/270 (71%), Gaps = 56/270 (20%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
+ +R F +SA ++ A+ KTF++YRWNPDKPDEKP MQEYKVDLN
Sbjct: 14 RQVRGFHISANQNAE------ARLKTFSVYRWNPDKPDEKPYMQEYKVDLNTCGPMILDA 67
Query: 150 ---------------------------------------NKIDAN-DKVSKIYPLPHMYV 169
+KID N + VSKIYPLPHMY+
Sbjct: 68 LIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNLNTVSKIYPLPHMYI 127
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDL+PDMNNFY QYKSIQPWLQR + ++ G QYLQS++DRKKLDGLYECILCACCSTS
Sbjct: 128 VKDLIPDMNNFYTQYKSIQPWLQRGEGKDTGKKQYLQSVEDRKKLDGLYECILCACCSTS 187
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD KTA+RL +LKDP+SVYRCHTIMNCTRTCPK
Sbjct: 188 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDNKTAERLEKLKDPYSVYRCHTIMNCTRTCPK 247
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
GLNPG+AIAEIKKLL+ + +K+KPGLD A
Sbjct: 248 GLNPGKAIAEIKKLLANISQKEKPGLDATA 277
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKID N + VSKIYPL
Sbjct: 63 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNLNTVSKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDL+PDMNNFY QYKSIQ PW
Sbjct: 123 PHMYIVKDLIPDMNNFYTQYKSIQ-----PW 148
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 26/124 (20%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y+ +++ D L ++K DP +R R+C +G+
Sbjct: 50 MQEYKVDLNTCGPMILDALIKIKNEIDPTLTFR--------RSCREGI------------ 89
Query: 303 LSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A + KID N + VSKIYPLPHMY+VKDL+PDMNNFY QYKSIQPW
Sbjct: 90 -CGSCAMNIGGTNTLACISKIDTNLNTVSKIYPLPHMYIVKDLIPDMNNFYTQYKSIQPW 148
Query: 361 LPRS 364
L R
Sbjct: 149 LQRG 152
>gi|283046834|ref|NP_001164360.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Tribolium castaneum]
gi|270014261|gb|EFA10709.1| hypothetical protein TcasGA2_TC011988 [Tribolium castaneum]
Length = 283
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/276 (61%), Positives = 194/276 (70%), Gaps = 57/276 (20%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------ 150
T IR+ +SA+ V + K FAIYRWNPD+PD+KP +QEYKVDLN
Sbjct: 14 TFGQIRNLHVSASVGQNV------REKKFAIYRWNPDQPDKKPWVQEYKVDLNACGPMVL 67
Query: 151 ------------------------------------------KIDAN-DKVSKIYPLPHM 167
KID + DK +KIYPLPHM
Sbjct: 68 DALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACICKIDTSLDKPTKIYPLPHM 127
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQR--DKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
YVVKDLVPDM NFY QYKSIQPWLQR +K++ + QYLQS+DDR+KLDGLYECILCACC
Sbjct: 128 YVVKDLVPDMTNFYKQYKSIQPWLQRKDEKKSGEHQQYLQSMDDRQKLDGLYECILCACC 187
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWNG+KYLGPAVLMQAYRWIIDSRD+ TA+RL++LKDPFSVYRCHTI+NCT+T
Sbjct: 188 STSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDDATAERLDKLKDPFSVYRCHTILNCTKT 247
Query: 286 CPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
CPKGLNPG+AIAEIKKLL GL KKD PGLDTAAL +
Sbjct: 248 CPKGLNPGKAIAEIKKLLGGLAKKDAPGLDTAALQR 283
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACI KID + DK +KIYPL
Sbjct: 65 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACICKIDTSLDKPTKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM NFY QYKSIQ PW
Sbjct: 125 PHMYVVKDLVPDMTNFYKQYKSIQ-----PW 150
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + KID + DK +KIYPLPHMYVVKDLVPDM NFY QYKSIQPWL R
Sbjct: 101 GVNTLACICKIDTSLDKPTKIYPLPHMYVVKDLVPDMTNFYKQYKSIQPWLQR 153
>gi|350398725|ref|XP_003485289.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Bombus impatiens]
Length = 277
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/269 (61%), Positives = 190/269 (70%), Gaps = 56/269 (20%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
+ +R F +SA ++A AK KTFA+YRWNPDKPDEKP MQEYKVDLN
Sbjct: 14 RQVRRFHISANQNAA------AKLKTFAVYRWNPDKPDEKPYMQEYKVDLNTCGPMILDA 67
Query: 150 ---------------------------------------NKIDAN-DKVSKIYPLPHMYV 169
+KID + + SKIYPLPHMY+
Sbjct: 68 LIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTDTNSTSKIYPLPHMYI 127
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPD+NNFY QYKSIQPWLQR D + G+ QYLQS++DRKKLDGLYECILCACCSTS
Sbjct: 128 VKDLVPDLNNFYNQYKSIQPWLQRGDGQESGSKQYLQSVEDRKKLDGLYECILCACCSTS 187
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD K +RL +++DPFSVYRCHTIMNCTRTCPK
Sbjct: 188 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDTKAKERLEKMRDPFSVYRCHTIMNCTRTCPK 247
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTA 317
GLNPG+AIAEIKKLL+ + +K KPG+D A
Sbjct: 248 GLNPGKAIAEIKKLLANISEKQKPGIDAA 276
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKID + + SKIYPL
Sbjct: 63 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTDTNSTSKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QYKSIQ PW
Sbjct: 123 PHMYIVKDLVPDLNNFYNQYKSIQ-----PW 148
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 72/138 (52%), Gaps = 27/138 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ Y+ +++ D L ++K DP +R R+C +
Sbjct: 37 YRWNPDK-PDEKPYMQEYKVDLNTCGPMILDALIKIKNEIDPTLTFR--------RSCRE 87
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID + + SKIYPLPHMY+VKDLVPD
Sbjct: 88 GI-------------CGSCAMNIGGTNTLACISKIDTDTNSTSKIYPLPHMYIVKDLVPD 134
Query: 347 MNNFYAQYKSIQPWLPRS 364
+NNFY QYKSIQPWL R
Sbjct: 135 LNNFYNQYKSIQPWLQRG 152
>gi|312384972|gb|EFR29572.1| hypothetical protein AND_01318 [Anopheles darlingi]
Length = 658
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 179/249 (71%), Gaps = 53/249 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN----------------------------------- 149
F IYRWNPD+P++KP Q Y+VDL
Sbjct: 408 FQIYRWNPDQPEQKPYNQTYEVDLGACGPMVLDALIKIKNEMDPTLTFRRSCREGICGSC 467
Query: 150 -------------NKIDAN--DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+KIDA DK +KIYPLPHMYVVKDLVPDMNNFY QY+SIQPWLQR
Sbjct: 468 AMNIGGTNTLACISKIDAGNLDKPTKIYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQRK 527
Query: 195 KEN---IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
E G+AQYLQS+DDR KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW
Sbjct: 528 NETGEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 587
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
IIDSRDE TA RL++LKDPFSVYRCHTIMNCTRTCPKGLNPG+AIAEIKKLLSG+ KKD
Sbjct: 588 IIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLLSGIAKKDA 647
Query: 312 PGLDTAALH 320
PGL+TAALH
Sbjct: 648 PGLETAALH 656
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/92 (85%), Positives = 81/92 (88%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN--DKVSKIYP 58
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKIDA DK +KIYP
Sbjct: 437 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDAGNLDKPTKIYP 496
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHMYVVKDLVPDMNNFY QY+SIQ PW
Sbjct: 497 LPHMYVVKDLVPDMNNFYNQYRSIQ-----PW 523
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Query: 317 AALHKIDAN--DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA DK +KIYPLPHMYVVKDLVPDMNNFY QY+SIQPWL R
Sbjct: 478 ACISKIDAGNLDKPTKIYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQR 526
>gi|158285891|ref|XP_308512.4| AGAP007309-PA [Anopheles gambiae str. PEST]
gi|157020207|gb|EAA45422.4| AGAP007309-PA [Anopheles gambiae str. PEST]
Length = 290
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 166/249 (66%), Positives = 182/249 (73%), Gaps = 53/249 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN----------------------------------- 149
F IYRWNPDKP+EKP Q Y+VDL+
Sbjct: 40 FQIYRWNPDKPEEKPYNQTYEVDLSACGPMVLDALIKIKNEMDPTLTFRRSCREGICGSC 99
Query: 150 -------------NKIDAN--DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+KIDA+ DK +KIYPLPHMYVVKDLVPDMNNFY QY+SIQPWLQR
Sbjct: 100 AMNIGGTNTLACISKIDADNLDKPTKIYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQRK 159
Query: 195 KENI---GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
E+ G+AQYLQS+DDR KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW
Sbjct: 160 NESTEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 219
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
IIDSRDE TA RL++LKDPFSVYRCHTIMNCTRTCPKGLNPG+AIAEIKKLLSG+ KKD
Sbjct: 220 IIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLLSGIAKKDA 279
Query: 312 PGLDTAALH 320
PGL+TAALH
Sbjct: 280 PGLETAALH 288
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN--DKVSKIYP 58
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKIDA+ DK +KIYP
Sbjct: 69 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDADNLDKPTKIYP 128
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHMYVVKDLVPDMNNFY QY+SIQ PW
Sbjct: 129 LPHMYVVKDLVPDMNNFYNQYRSIQ-----PW 155
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 2/49 (4%)
Query: 317 AALHKIDAN--DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA+ DK +KIYPLPHMYVVKDLVPDMNNFY QY+SIQPWL R
Sbjct: 110 ACISKIDADNLDKPTKIYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQR 158
>gi|340712067|ref|XP_003394586.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Bombus terrestris]
Length = 277
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/269 (60%), Positives = 189/269 (70%), Gaps = 56/269 (20%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
+ +R F +SA ++A AK KTFA+YRWNPDKPDEKP MQEYKVDLN
Sbjct: 14 RQVRRFHISANQNAA------AKLKTFAVYRWNPDKPDEKPYMQEYKVDLNTCGPMILDA 67
Query: 150 ---------------------------------------NKIDAN-DKVSKIYPLPHMYV 169
+KID + + SKIYPLPHMY+
Sbjct: 68 LIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTDTNSTSKIYPLPHMYI 127
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPD+NNFY QYKSIQPWLQ D + G+ QYLQS++DRKKLDGLYECILCACCSTS
Sbjct: 128 VKDLVPDLNNFYNQYKSIQPWLQHGDGQESGSKQYLQSVEDRKKLDGLYECILCACCSTS 187
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD K +RL +++DPFSVYRCHTIMNCTRTCPK
Sbjct: 188 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDTKAKERLEKMRDPFSVYRCHTIMNCTRTCPK 247
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTA 317
GLNPG+AIAEIKKLL+ + +K KPG+D A
Sbjct: 248 GLNPGKAIAEIKKLLANISEKQKPGIDAA 276
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKID + + SKIYPL
Sbjct: 63 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTDTNSTSKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QYKSIQ PW
Sbjct: 123 PHMYIVKDLVPDLNNFYNQYKSIQ-----PW 148
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 27/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ Y+ +++ D L ++K DP +R R+C +
Sbjct: 37 YRWNPDK-PDEKPYMQEYKVDLNTCGPMILDALIKIKNEIDPTLTFR--------RSCRE 87
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID + + SKIYPLPHMY+VKDLVPD
Sbjct: 88 GI-------------CGSCAMNIGGTNTLACISKIDTDTNSTSKIYPLPHMYIVKDLVPD 134
Query: 347 MNNFYAQYKSIQPWL 361
+NNFY QYKSIQPWL
Sbjct: 135 LNNFYNQYKSIQPWL 149
>gi|289742779|gb|ADD20137.1| succinate dehydrogenase Fe-s protein subunit [Glossina morsitans
morsitans]
Length = 297
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/262 (64%), Positives = 179/262 (68%), Gaps = 53/262 (20%)
Query: 113 AVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------------- 149
A E PA + KTF IYRWNP+ EKP MQ Y+V+L
Sbjct: 36 AQAKEAPAPQMKTFQIYRWNPENAGEKPFMQTYEVNLRECGPMVLDALIKIKNEVDATLT 95
Query: 150 --------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYA 182
+KID N K KIYPLPHMYVV+DLVPDMNNFY
Sbjct: 96 FRRSCREGICGSCAMNIGGTNTLACISKIDTNLSKPLKIYPLPHMYVVRDLVPDMNNFYE 155
Query: 183 QYKSIQPWLQRDKENI---GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
QY+SIQPWLQR E G AQYLQS++DR KLDGLYECILCACCSTSCPSYWWN EKY
Sbjct: 156 QYRSIQPWLQRKNEATEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKY 215
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPAVLMQAYRWIIDSRDE T RLN+LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI
Sbjct: 216 LGPAVLMQAYRWIIDSRDESTEQRLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 275
Query: 300 KKLLSGLVKKDKPGLDTAALHK 321
KKLLSGL KK +P LDTAALHK
Sbjct: 276 KKLLSGLAKKPEPKLDTAALHK 297
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 78/91 (85%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNIGG NTLACISKID N K KIYPL
Sbjct: 78 MVLDALIKIKNEVDATLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNLSKPLKIYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY+SIQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRSIQ-----PW 163
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y WN E G MQ Y + D L ++K+ + R+C +G+
Sbjct: 52 YRWNPEN-AGEKPFMQTYEVNLRECGPMVLDALIKIKNEVDA-----TLTFRRSCREGI- 104
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNN 349
G + G +T A + KID N K KIYPLPHMYVV+DLVPDMNN
Sbjct: 105 ------------CGSCAMNIGGTNTLACISKIDTNLSKPLKIYPLPHMYVVRDLVPDMNN 152
Query: 350 FYAQYKSIQPWLPR 363
FY QY+SIQPWL R
Sbjct: 153 FYEQYRSIQPWLQR 166
>gi|157125918|ref|XP_001660815.1| succinate dehydrogenase [Aedes aegypti]
gi|108873481|gb|EAT37706.1| AAEL010330-PA [Aedes aegypti]
Length = 289
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/249 (65%), Positives = 181/249 (72%), Gaps = 53/249 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN----------------------------------- 149
F IYRWNPDKP++KP Q Y+VDL+
Sbjct: 39 FQIYRWNPDKPEQKPYNQTYEVDLSACGPMVLDALIKIKNEIDPTLTFRRSCREGICGSC 98
Query: 150 -------------NKIDAN--DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+KIDA+ DK +K+YPLPHMYVVKDLVPDMNNFY QY+SIQPWLQR
Sbjct: 99 AMNIGGTNTLACISKIDADNLDKPTKVYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQRK 158
Query: 195 KE---NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
E G+AQYLQS+DDR KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW
Sbjct: 159 NEAGEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
IIDSRDE TA RL++LKDPFSVYRCHTIMNCTRTCPKGLNPG+AIAEIKKLLSG+ KKD
Sbjct: 219 IIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKLLSGIAKKDA 278
Query: 312 PGLDTAALH 320
PGL+TAALH
Sbjct: 279 PGLETAALH 287
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 82/92 (89%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN--DKVSKIYP 58
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKIDA+ DK +K+YP
Sbjct: 68 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDADNLDKPTKVYP 127
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHMYVVKDLVPDMNNFY QY+SIQ PW
Sbjct: 128 LPHMYVVKDLVPDMNNFYNQYRSIQ-----PW 154
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 2/49 (4%)
Query: 317 AALHKIDAN--DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA+ DK +K+YPLPHMYVVKDLVPDMNNFY QY+SIQPWL R
Sbjct: 109 ACISKIDADNLDKPTKVYPLPHMYVVKDLVPDMNNFYNQYRSIQPWLQR 157
>gi|194758066|ref|XP_001961283.1| GF11072 [Drosophila ananassae]
gi|190622581|gb|EDV38105.1| GF11072 [Drosophila ananassae]
Length = 297
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 170/285 (59%), Positives = 190/285 (66%), Gaps = 56/285 (19%)
Query: 93 LGTLTAKN-IRSFQLSAA--ASSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
+G+LTA+ +R+ A A P E K + K F IYRWNPD EKP MQ Y VDL
Sbjct: 13 VGSLTARQQLRTITNGTAQLEQQAQPKEAKEPQIKKFEIYRWNPDNAGEKPYMQTYDVDL 72
Query: 149 N------------------------------------------------NKIDANDKVS- 159
+KID N S
Sbjct: 73 RECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNTSKSL 132
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENI---GNAQYLQSLDDRKKLDGL 216
K+YPLPHMYVV+DLVPDMNNFY QY++IQPWLQR E + G AQYLQS++DR KLDGL
Sbjct: 133 KVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAVEEKGKAQYLQSVEDRSKLDGL 192
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWIIDSRDE +A+RL++LKDPFSVYRC
Sbjct: 193 YECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRC 252
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
HTIMNCTRTCPKGLNPGRAIAEIKKLLSGL K +P L+TAALHK
Sbjct: 253 HTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPEPKLETAALHK 297
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY++IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQ-----PW 163
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID N S K+YPLPHMYVV+DLVPDMNNFY QY++IQPWL R
Sbjct: 119 ACISKIDTNTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQR 166
>gi|17137106|ref|NP_477101.1| succinate dehydrogenase B [Drosophila melanogaster]
gi|195581026|ref|XP_002080335.1| GD10425 [Drosophila simulans]
gi|729335|sp|P21914.2|DHSB_DROME RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|508849|gb|AAA61925.1| succinate dehydrogenase iron-protein subunit [Drosophila
melanogaster]
gi|7302306|gb|AAF57396.1| succinate dehydrogenase B [Drosophila melanogaster]
gi|21430210|gb|AAM50783.1| LD23740p [Drosophila melanogaster]
gi|194192344|gb|EDX05920.1| GD10425 [Drosophila simulans]
gi|220943896|gb|ACL84491.1| SdhB-PA [synthetic construct]
gi|220953770|gb|ACL89428.1| SdhB-PA [synthetic construct]
Length = 297
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 189/289 (65%), Gaps = 64/289 (22%)
Query: 93 LGTLTAKNIRSFQLSAAASSAVPAEKPAK--------YKTFAIYRWNPDKPDEKPTMQEY 144
+G+L A+N Q+ A ++ E+ A+ K F IYRWNPD EKP MQ Y
Sbjct: 13 VGSLVARN----QMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTY 68
Query: 145 KVDLN------------------------------------------------NKIDAND 156
+VDL +KID N
Sbjct: 69 EVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINT 128
Query: 157 KVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE---NIGNAQYLQSLDDRKK 212
S K+YPLPHMYVV+DLVPDMNNFY QY++IQPWLQR E G AQYLQS++DR K
Sbjct: 129 SKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSK 188
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWIIDSRDE +A+RLN+LKDPFS
Sbjct: 189 LDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFS 248
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL K P L+TAALHK
Sbjct: 249 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPAPKLETAALHK 297
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY++IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQ-----PW 163
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 52 YRWNPDN-AGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 102
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N S K+YPLPHMYVV+DLVPD
Sbjct: 103 GI-------------CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPD 149
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QY++IQPWL R
Sbjct: 150 MNNFYEQYRNIQPWLQR 166
>gi|195331927|ref|XP_002032650.1| GM20899 [Drosophila sechellia]
gi|194124620|gb|EDW46663.1| GM20899 [Drosophila sechellia]
Length = 297
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 189/289 (65%), Gaps = 64/289 (22%)
Query: 93 LGTLTAKNIRSFQLSAAASSAVPAEKPAK--------YKTFAIYRWNPDKPDEKPTMQEY 144
+G+L A+N Q+ A ++ E+ A+ K F IYRWNPD EKP MQ Y
Sbjct: 13 VGSLVARN----QMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTY 68
Query: 145 KVDLN------------------------------------------------NKIDAND 156
+VDL +KID N
Sbjct: 69 EVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINT 128
Query: 157 KVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE---NIGNAQYLQSLDDRKK 212
S K+YPLPHMYVV+DLVPDMNNFY QY++IQPWLQR E G AQYLQS++DR K
Sbjct: 129 SKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSK 188
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWIIDSRDE +A+RLN+LKDPFS
Sbjct: 189 LDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFS 248
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL K P L+TAALHK
Sbjct: 249 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPAPKLETAALHK 297
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY++IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQ-----PW 163
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 52 YRWNPDN-AGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 102
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N S K+YPLPHMYVV+DLVPD
Sbjct: 103 GI-------------CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPD 149
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QY++IQPWL R
Sbjct: 150 MNNFYEQYRNIQPWLQR 166
>gi|225719282|gb|ACO15487.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Caligus clemensi]
Length = 298
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/275 (58%), Positives = 185/275 (67%), Gaps = 50/275 (18%)
Query: 94 GTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---- 149
G L+ S S+A V + K KTFAIYRWNPD P EKP +QEYKV+LN
Sbjct: 17 GPLSISTRGSSAASSAPKEGVTGLRTDKVKTFAIYRWNPDNPGEKPRLQEYKVNLNDCGP 76
Query: 150 --------------------------------------------NKIDAN-DKVSKIYPL 164
NK+D N +K KIYPL
Sbjct: 77 MVLDALLKIKNEMDPTLTFRRSCREGICGSCSMNIGGVNTLACINKVDPNPNKAIKIYPL 136
Query: 165 PHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENI-GNAQYLQSLDDRKKLDGLYECILCA 223
PHMYVVKDLVPDMNNFY Q++SIQPWLQR+ E+ GN Q LQS++DR KLDGLYECILCA
Sbjct: 137 PHMYVVKDLVPDMNNFYEQHRSIQPWLQRENEDTSGNNQILQSVEDRSKLDGLYECILCA 196
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWWNG++YLGPAVLMQAYRW+IDSRD T +R+++L+DPFSVYRCHTIMNCT
Sbjct: 197 CCSTSCPSYWWNGDRYLGPAVLMQAYRWMIDSRDNATNERMDKLRDPFSVYRCHTIMNCT 256
Query: 284 RTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
+TCPKGLNPG+AIAEIKKLL G+ K KPGLD A
Sbjct: 257 KTCPKGLNPGKAIAEIKKLLGGVADKGKPGLDGTA 291
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 81/91 (89%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNEMDPTLTFRRSCREGICGSC+MNIGGVNTLACI+K+D N +K KIYPL
Sbjct: 77 MVLDALLKIKNEMDPTLTFRRSCREGICGSCSMNIGGVNTLACINKVDPNPNKAIKIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDMNNFY Q++SIQ PW
Sbjct: 137 PHMYVVKDLVPDMNNFYEQHRSIQ-----PW 162
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A ++K+D N +K KIYPLPHMYVVKDLVPDMNNFY Q++SIQPWL R
Sbjct: 113 GVNTLACINKVDPNPNKAIKIYPLPHMYVVKDLVPDMNNFYEQHRSIQPWLQR 165
>gi|195474201|ref|XP_002089380.1| GE19076 [Drosophila yakuba]
gi|194175481|gb|EDW89092.1| GE19076 [Drosophila yakuba]
Length = 297
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 189/289 (65%), Gaps = 64/289 (22%)
Query: 93 LGTLTAKNIRSFQLSAAASSAVPAEKPAK--------YKTFAIYRWNPDKPDEKPTMQEY 144
+G+L A+N QL A ++ E+ A+ K F IYRWNPD EKP MQ Y
Sbjct: 13 VGSLVARN----QLRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTY 68
Query: 145 KVDLN------------------------------------------------NKIDAND 156
+VDL +KID N
Sbjct: 69 EVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINT 128
Query: 157 KVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE---NIGNAQYLQSLDDRKK 212
S K+YPLPHMYVV+DLVPDMNNFY QY++IQPWLQR E G AQYLQS++DR K
Sbjct: 129 SKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSK 188
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWIIDSRDE +A+RL++LKDPFS
Sbjct: 189 LDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLSKLKDPFS 248
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL K P L+TAALHK
Sbjct: 249 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPAPKLETAALHK 297
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY++IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQ-----PW 163
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 52 YRWNPDN-AGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 102
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N S K+YPLPHMYVV+DLVPD
Sbjct: 103 GI-------------CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPD 149
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QY++IQPWL R
Sbjct: 150 MNNFYEQYRNIQPWLQR 166
>gi|194864004|ref|XP_001970722.1| GG23224 [Drosophila erecta]
gi|190662589|gb|EDV59781.1| GG23224 [Drosophila erecta]
Length = 297
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 169/285 (59%), Positives = 189/285 (66%), Gaps = 56/285 (19%)
Query: 93 LGTLTAKN-IRSFQLSAAA--SSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
+G+L A+N +R+ A A P E + + K F IYRWNPD EKP MQ Y+VDL
Sbjct: 13 VGSLVARNQLRAISNGTAQLQQQAQPKEDQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDL 72
Query: 149 N------------------------------------------------NKIDANDKVS- 159
+KID N S
Sbjct: 73 RECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSL 132
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE---NIGNAQYLQSLDDRKKLDGL 216
K+YPLPHMYVV+DLVPDMNNFY QY++IQPWLQR E G AQYLQS++DR KLDGL
Sbjct: 133 KVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGL 192
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWIIDSRDE +A+RL++LKDPFSVYRC
Sbjct: 193 YECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRC 252
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
HTIMNCTRTCPKGLNPGRAIAEIKKLLSGL K P L+TAALHK
Sbjct: 253 HTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPAPKLETAALHK 297
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY++IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQ-----PW 163
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 52 YRWNPDN-AGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 102
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N S K+YPLPHMYVV+DLVPD
Sbjct: 103 GI-------------CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPD 149
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QY++IQPWL R
Sbjct: 150 MNNFYEQYRNIQPWLQR 166
>gi|225714060|gb|ACO12876.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
gi|290561026|gb|ADD37915.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
[Lepeophtheirus salmonis]
Length = 301
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/271 (58%), Positives = 182/271 (67%), Gaps = 52/271 (19%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------- 150
+R +A + V + K KTFAIYRWNPD P EKP +QEYKV+L++
Sbjct: 24 GLRGAAQAATSQEGVTGLRTDKVKTFAIYRWNPDNPGEKPKVQEYKVNLSDCGPMVLDAL 83
Query: 151 ---------------------------------------KIDAN-DKVSKIYPLPHMYVV 170
KID N K KIYPLPHMYVV
Sbjct: 84 IKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACITKIDPNPAKAIKIYPLPHMYVV 143
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENI---GNAQYLQSLDDRKKLDGLYECILCACCST 227
KDLVPDMNNFY QY+SIQPWLQR+ E+ GN Q LQS++DR KLDGLYECILCACCST
Sbjct: 144 KDLVPDMNNFYEQYRSIQPWLQREDESSTSEGNLQILQSVEDRAKLDGLYECILCACCST 203
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWNG++YLGPAVLMQAYRW+IDSRD T +R+++L+DPFSVYRCHTIMNCT+TCP
Sbjct: 204 SCPSYWWNGDRYLGPAVLMQAYRWMIDSRDSATHERMDKLRDPFSVYRCHTIMNCTKTCP 263
Query: 288 KGLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
KGLNPG+AIAEIKKLL G+ K KPGLD A
Sbjct: 264 KGLNPGKAIAEIKKLLGGVADKGKPGLDGTA 294
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNIGGVNTLACI+KID N K KIYPL
Sbjct: 78 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACITKIDPNPAKAIKIYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDMNNFY QY+SIQ PW
Sbjct: 138 PHMYVVKDLVPDMNNFYEQYRSIQ-----PW 163
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + KID N K KIYPLPHMYVVKDLVPDMNNFY QY+SIQPWL R
Sbjct: 114 GVNTLACITKIDPNPAKAIKIYPLPHMYVVKDLVPDMNNFYEQYRSIQPWLQR 166
>gi|195028564|ref|XP_001987146.1| GH21756 [Drosophila grimshawi]
gi|193903146|gb|EDW02013.1| GH21756 [Drosophila grimshawi]
Length = 296
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/268 (60%), Positives = 179/268 (66%), Gaps = 53/268 (19%)
Query: 107 SAAASSAVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------- 149
S A P E A + K F IYRWNPD EKP MQ Y++++
Sbjct: 29 SQLEQQAQPKESQAPQIKKFEIYRWNPDNAGEKPYMQTYEINMRECGPMVLDALIKIKNE 88
Query: 150 --------------------------------NKIDA-NDKVSKIYPLPHMYVVKDLVPD 176
+KIDA + K K+YPLPHMYVV+DLVPD
Sbjct: 89 MDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPD 148
Query: 177 MNNFYAQYKSIQPWLQRDKE---NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
MNNFY QYK+IQPWLQR E G AQYLQS++DR KLDGLYECILCACCSTSCPSYW
Sbjct: 149 MNNFYEQYKNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYW 208
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN EKYLGPAVLMQAYRWIIDSRDE T +RL++LKDPFSVYRCHTIMNCTRTCPKGLNPG
Sbjct: 209 WNAEKYLGPAVLMQAYRWIIDSRDEMTVERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPG 268
Query: 294 RAIAEIKKLLSGLVKKDKPGLDTAALHK 321
RAIAEIKKLLSGL K P L+TAALHK
Sbjct: 269 RAIAEIKKLLSGLASKPAPKLETAALHK 296
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKIDA + K K+YPL
Sbjct: 77 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDATSSKPLKVYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QYK+IQ PW
Sbjct: 137 PHMYVVRDLVPDMNNFYEQYKNIQ-----PW 162
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 69/137 (50%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 51 YRWNPDN-AGEKPYMQTYEINMRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 101
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDA-NDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KIDA + K K+YPLPHMYVV+DLVPD
Sbjct: 102 GI-------------CGSCAMNIGGTNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPD 148
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QYK+IQPWL R
Sbjct: 149 MNNFYEQYKNIQPWLQR 165
>gi|125806762|ref|XP_001360158.1| GA17170 [Drosophila pseudoobscura pseudoobscura]
gi|195149159|ref|XP_002015525.1| GL11120 [Drosophila persimilis]
gi|54635329|gb|EAL24732.1| GA17170 [Drosophila pseudoobscura pseudoobscura]
gi|194109372|gb|EDW31415.1| GL11120 [Drosophila persimilis]
Length = 297
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 177/262 (67%), Gaps = 53/262 (20%)
Query: 113 AVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------- 150
A P E K + K F IYRW+PD EKP MQ Y+V+L +
Sbjct: 36 AQPKEAKEPQIKKFEIYRWSPDNAGEKPHMQTYEVNLRDCGPMVLDALIKIKNEMDPTLT 95
Query: 151 ---------------------------KIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYA 182
KID N S K+YPLPHMYVV+DLVPDMNNFY
Sbjct: 96 FRRSCREGICGSCAMNIGGINTLACISKIDTNTSKSLKVYPLPHMYVVRDLVPDMNNFYE 155
Query: 183 QYKSIQPWLQRDKE---NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
QYK+IQPWLQR E G AQYLQS++DR KLDGLYECILCACCSTSCPSYWWN EKY
Sbjct: 156 QYKNIQPWLQRKNEAGEKKGRAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKY 215
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPAVLMQAYRWIIDSRDE +A+RL++LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI
Sbjct: 216 LGPAVLMQAYRWIIDSRDENSAERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 275
Query: 300 KKLLSGLVKKDKPGLDTAALHK 321
KKLL+G K P L+TAALHK
Sbjct: 276 KKLLAGFASKPAPKLETAALHK 297
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG+NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGINTLACISKIDTNTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QYK+IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYKNIQ-----PW 163
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + KID N S K+YPLPHMYVV+DLVPDMNNFY QYK+IQPWL R
Sbjct: 114 GINTLACISKIDTNTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYKNIQPWLQR 166
>gi|195120964|ref|XP_002004991.1| GI19303 [Drosophila mojavensis]
gi|193910059|gb|EDW08926.1| GI19303 [Drosophila mojavensis]
Length = 296
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/258 (61%), Positives = 176/258 (68%), Gaps = 52/258 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------------------- 149
A + + K F IYRWNPD EKP MQ Y++++
Sbjct: 39 AAQEPQIKKFEIYRWNPDNAGEKPYMQTYEINMRECGPMVLDALIKIKNEMDPTLTFRRS 98
Query: 150 ----------------------NKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
+KIDA + K K+YPLPHMYVV+DLVPDMNNFY QYK+
Sbjct: 99 CREGICGSCAMNIGGTNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPDMNNFYEQYKN 158
Query: 187 IQPWLQRDKE---NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
IQPWLQR E G AQYLQS++DR KLDGLYECILCACCSTSCPSYWWN EKYLGPA
Sbjct: 159 IQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPA 218
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRWIIDSRDE + +RL++LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL
Sbjct: 219 VLMQAYRWIIDSRDENSVERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 278
Query: 304 SGLVKKDKPGLDTAALHK 321
SGL K P L+TAALHK
Sbjct: 279 SGLASKPAPKLETAALHK 296
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKIDA + K K+YPL
Sbjct: 77 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDATSSKPLKVYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QYK+IQ PW
Sbjct: 137 PHMYVVRDLVPDMNNFYEQYKNIQ-----PW 162
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 69/137 (50%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 51 YRWNPDN-AGEKPYMQTYEINMRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 101
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDA-NDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KIDA + K K+YPLPHMYVV+DLVPD
Sbjct: 102 GI-------------CGSCAMNIGGTNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPD 148
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QYK+IQPWL R
Sbjct: 149 MNNFYEQYKNIQPWLQR 165
>gi|195436172|ref|XP_002066043.1| GK22142 [Drosophila willistoni]
gi|194162128|gb|EDW77029.1| GK22142 [Drosophila willistoni]
Length = 297
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 177/262 (67%), Gaps = 53/262 (20%)
Query: 113 AVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------------- 149
A P E K + K F IYRWNPD EKP MQ Y+V+L
Sbjct: 36 AQPKEAKEPQIKKFEIYRWNPDNAGEKPYMQTYEVNLRECGPMVLDALIKIKNEMDPTLT 95
Query: 150 --------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYA 182
+KID N K K+YPLPHMYVV+DLVPDMNNFY
Sbjct: 96 FRRSCREGICGSCAMNIGGTNTLACISKIDTNASKSLKVYPLPHMYVVRDLVPDMNNFYE 155
Query: 183 QYKSIQPWLQRD---KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
QY++IQPWLQR E G AQYLQS++DR KLDGLYECILCACCSTSCPSYWWN EKY
Sbjct: 156 QYRNIQPWLQRKDEAGEQKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNPEKY 215
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPAVLMQAYRWIIDSRDE +A+RL +L+DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI
Sbjct: 216 LGPAVLMQAYRWIIDSRDENSAERLGKLRDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 275
Query: 300 KKLLSGLVKKDKPGLDTAALHK 321
KKLLSGL K P ++TAALHK
Sbjct: 276 KKLLSGLASKPAPKMETAALHK 297
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 104/157 (66%), Gaps = 20/157 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N K K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNASKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG---------GPWKILGTLTAKN----IRSFQL 106
PHMYVV+DLVPDMNNFY QY++IQ L G + L ++ ++ + L
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQPWLQRKDEAGEQKGKAQYLQSVEDRSKLDGLYECIL 197
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A S++ P+ P KY A+ YRW D DE
Sbjct: 198 CACCSTSCPSYWWNPEKYLGPAVLMQAYRWIIDSRDE 234
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + G MQ Y + D L ++K DP +R R+C +
Sbjct: 52 YRWNPDN-AGEKPYMQTYEVNLRECGPMVLDALIKIKNEMDPTLTFR--------RSCRE 102
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N K K+YPLPHMYVV+DLVPD
Sbjct: 103 GI-------------CGSCAMNIGGTNTLACISKIDTNASKSLKVYPLPHMYVVRDLVPD 149
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFY QY++IQPWL R
Sbjct: 150 MNNFYEQYRNIQPWLQR 166
>gi|195383546|ref|XP_002050487.1| GJ22180 [Drosophila virilis]
gi|194145284|gb|EDW61680.1| GJ22180 [Drosophila virilis]
Length = 296
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 179/258 (69%), Gaps = 53/258 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------------------- 149
A++P + K F IYRW+PD EKP MQ Y+V++
Sbjct: 40 AQEP-QIKKFEIYRWSPDNAGEKPHMQTYEVNMRECGPMVLDALIKIKNEIDPTLTFRRS 98
Query: 150 ----------------------NKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
+KIDA + K K+YPLPHMYVV+DLVPDMNNFY QYK+
Sbjct: 99 CREGICGSCAMNIGGVNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPDMNNFYEQYKN 158
Query: 187 IQPWLQRDKENI---GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
IQPWLQR E + G AQYLQS++DR KLDGLYECILCACCST+CPSYWWN EKYLGPA
Sbjct: 159 IQPWLQRKNEAVEQKGKAQYLQSVEDRSKLDGLYECILCACCSTACPSYWWNAEKYLGPA 218
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRWIIDSRDE + +RL++LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL
Sbjct: 219 VLMQAYRWIIDSRDENSVERLSKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 278
Query: 304 SGLVKKDKPGLDTAALHK 321
SGL K P ++TAALHK
Sbjct: 279 SGLASKPAPKMETAALHK 296
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA + K K+YPL
Sbjct: 77 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDATSSKPLKVYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QYK+IQ PW
Sbjct: 137 PHMYVVRDLVPDMNNFYEQYKNIQ-----PW 162
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + KIDA + K K+YPLPHMYVV+DLVPDMNNFY QYK+IQPWL R
Sbjct: 113 GVNTLACISKIDATSSKPLKVYPLPHMYVVRDLVPDMNNFYEQYKNIQPWLQR 165
>gi|225713990|gb|ACO12841.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 301
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/268 (58%), Positives = 180/268 (67%), Gaps = 52/268 (19%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------- 150
+R +A + V + K KTFAIYRWNPD P EKP +QEYKV+L++
Sbjct: 24 GLRGAAQAATSQEGVTGLRTDKVKTFAIYRWNPDNPGEKPKVQEYKVNLSDCGPMVLDAL 83
Query: 151 ---------------------------------------KIDAN-DKVSKIYPLPHMYVV 170
KID N K KIYPLPHMYVV
Sbjct: 84 IKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACITKIDPNPAKAIKIYPLPHMYVV 143
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENI---GNAQYLQSLDDRKKLDGLYECILCACCST 227
KDLVPDMNNFY QY+SIQPWLQR+ E+ GN Q LQS++D KLDGLYECILCACCST
Sbjct: 144 KDLVPDMNNFYEQYRSIQPWLQREDESSTSEGNLQILQSVEDGAKLDGLYECILCACCST 203
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWNG++YLGPAVLMQAYRW+IDSRD T +R+++L+DPFSVYRCHTIMNCT+TCP
Sbjct: 204 SCPSYWWNGDRYLGPAVLMQAYRWMIDSRDSATHERMDKLRDPFSVYRCHTIMNCTKTCP 263
Query: 288 KGLNPGRAIAEIKKLLSGLVKKDKPGLD 315
KGLNPG+AIAEIKKLL G+ K KPGLD
Sbjct: 264 KGLNPGKAIAEIKKLLGGVADKGKPGLD 291
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNIGGVNTLACI+KID N K KIYPL
Sbjct: 78 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACITKIDPNPAKAIKIYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDMNNFY QY+SIQ PW
Sbjct: 138 PHMYVVKDLVPDMNNFYEQYRSIQ-----PW 163
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + KID N K KIYPLPHMYVVKDLVPDMNNFY QY+SIQPWL R
Sbjct: 114 GVNTLACITKIDPNPAKAIKIYPLPHMYVVKDLVPDMNNFYEQYRSIQPWLQR 166
>gi|322788410|gb|EFZ14081.1| hypothetical protein SINV_09801 [Solenopsis invicta]
Length = 295
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/264 (59%), Positives = 182/264 (68%), Gaps = 51/264 (19%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------- 149
Q+ A ++AV + AK K F+IYRWNPDKPDEKP MQ+YKVDLN
Sbjct: 31 QVRALHTAAVQNAE-AKLKVFSIYRWNPDKPDEKPYMQKYKVDLNTCGPMVLDALIKIKN 89
Query: 150 ---------------------------------NKIDANDKVS-KIYPLPHMYVVKDLVP 175
+KID N S +YPLPHMY+VKDLVP
Sbjct: 90 EIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDKNTSTSCDVYPLPHMYIVKDLVP 149
Query: 176 DMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
D+NNFY QY+SIQPWLQ D + GN QYLQS++DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 150 DLNNFYEQYRSIQPWLQHTDTKETGNQQYLQSVEDRKKLDGLYECILCACCSTSCPSYWW 209
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
NG+KYLGPAVLMQAYRWIIDSRD + +RL +LKDPFSV+RCHTIMNCTRTCPKGLNPG+
Sbjct: 210 NGDKYLGPAVLMQAYRWIIDSRDTRAKERLEKLKDPFSVFRCHTIMNCTRTCPKGLNPGK 269
Query: 295 AIAEIKKLLSGLVKKDKPGLDTAA 318
AIAEIKKLL+ + +K +P L +
Sbjct: 270 AIAEIKKLLANVSQKPQPDLAASG 293
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 78/91 (85%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S +YPL
Sbjct: 79 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDKNTSTSCDVYPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QY+SIQ PW
Sbjct: 139 PHMYIVKDLVPDLNNFYEQYRSIQ-----PW 164
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 27/138 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ Y+ +++ D L ++K DP +R R+C +
Sbjct: 53 YRWNPDK-PDEKPYMQKYKVDLNTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 103
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N S +YPLPHMY+VKDLVPD
Sbjct: 104 GI-------------CGSCAMNIGGTNTLACISKIDKNTSTSCDVYPLPHMYIVKDLVPD 150
Query: 347 MNNFYAQYKSIQPWLPRS 364
+NNFY QY+SIQPWL +
Sbjct: 151 LNNFYEQYRSIQPWLQHT 168
>gi|307182148|gb|EFN69491.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Camponotus floridanus]
Length = 278
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/266 (59%), Positives = 183/266 (68%), Gaps = 56/266 (21%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
+ IRS +A ++ A+ KTF+IYRWNPDKPDEKP MQ+YKVDLN
Sbjct: 15 RQIRSLHTAAVQNAE------ARLKTFSIYRWNPDKPDEKPYMQKYKVDLNTCGPMVLDA 68
Query: 150 ---------------------------------------NKIDANDKVS-KIYPLPHMYV 169
+KID N S IYPLPHMY+
Sbjct: 69 LIKIKNEVDPTLTFRRSCREGICGSCAMNIQGTNTLACISKIDKNTSSSCDIYPLPHMYI 128
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPD+NNFY QY+SIQPWLQ + + +GN QYLQS++DRKKLDGLYECILCACCSTS
Sbjct: 129 VKDLVPDLNNFYEQYRSIQPWLQHKGIKKVGNQQYLQSVEDRKKLDGLYECILCACCSTS 188
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD +T +RL +LKDPFSVYRCHTIMNCTRTCPK
Sbjct: 189 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDTQTNERLEKLKDPFSVYRCHTIMNCTRTCPK 248
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGL 314
GLNPG+AIAEIKKLL+ + +K + L
Sbjct: 249 GLNPGKAIAEIKKLLANISQKPQAEL 274
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACISKID N S IYPL
Sbjct: 64 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIQGTNTLACISKIDKNTSSSCDIYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QY+SIQ PW
Sbjct: 124 PHMYIVKDLVPDLNNFYEQYRSIQ-----PW 149
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 27/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ Y+ +++ D L ++K DP +R R+C +
Sbjct: 38 YRWNPDK-PDEKPYMQKYKVDLNTCGPMVLDALIKIKNEVDPTLTFR--------RSCRE 88
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N S IYPLPHMY+VKDLVPD
Sbjct: 89 GI-------------CGSCAMNIQGTNTLACISKIDKNTSSSCDIYPLPHMYIVKDLVPD 135
Query: 347 MNNFYAQYKSIQPWL 361
+NNFY QY+SIQPWL
Sbjct: 136 LNNFYEQYRSIQPWL 150
>gi|332021643|gb|EGI62002.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Acromyrmex echinatior]
Length = 279
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/260 (59%), Positives = 179/260 (68%), Gaps = 50/260 (19%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------- 149
A +A AK KTF+IYRWNPDKPDEKP MQ+YKVDLN
Sbjct: 18 ALHTATVQNAEAKLKTFSIYRWNPDKPDEKPYMQKYKVDLNACGPMVLDALIKIKNEIDP 77
Query: 150 -----------------------------NKIDANDKVS-KIYPLPHMYVVKDLVPDMNN 179
+KID + S ++YPLPHMY+VKDLVPD+NN
Sbjct: 78 TLTFRRSCREGICGSCAMNIGGTNTLACISKIDKSTSTSCEVYPLPHMYIVKDLVPDLNN 137
Query: 180 FYAQYKSIQPWLQ-RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FY QY++IQPWLQ +D + GN QYLQS++DRKKLDGLYECILCACCSTSCPSYWWNG+K
Sbjct: 138 FYDQYRNIQPWLQHKDTKETGNEQYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNGDK 197
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPAVLMQAYRWIIDSRD + +RL +LKDPFSVYRCHTIMNCTRTCPKGLNPG+AIAE
Sbjct: 198 YLGPAVLMQAYRWIIDSRDTQAKERLEKLKDPFSVYRCHTIMNCTRTCPKGLNPGKAIAE 257
Query: 299 IKKLLSGLVKKDKPGLDTAA 318
IKKLL+ L +K + L +
Sbjct: 258 IKKLLANLSQKPQSDLTASG 277
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKID + S ++YPL
Sbjct: 63 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDKSTSTSCEVYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QY++IQ PW
Sbjct: 123 PHMYIVKDLVPDLNNFYDQYRNIQ-----PW 148
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 27/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ Y+ +++ D L ++K DP +R R+C +
Sbjct: 37 YRWNPDK-PDEKPYMQKYKVDLNACGPMVLDALIKIKNEIDPTLTFR--------RSCRE 87
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID + S ++YPLPHMY+VKDLVPD
Sbjct: 88 GI-------------CGSCAMNIGGTNTLACISKIDKSTSTSCEVYPLPHMYIVKDLVPD 134
Query: 347 MNNFYAQYKSIQPWL 361
+NNFY QY++IQPWL
Sbjct: 135 LNNFYDQYRNIQPWL 149
>gi|318087142|gb|ADV40163.1| succinate dehydrogenase iron-sulfur subunit mitochondrial precursor
[Latrodectus hesperus]
Length = 297
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/246 (63%), Positives = 171/246 (69%), Gaps = 50/246 (20%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF+IYRW+PD P EKP MQ Y+VDLNN
Sbjct: 52 KTFSIYRWDPDNPKEKPRMQNYEVDLNNCGPMVLDALIKIKNELDPTLTFRRSCREGICG 111
Query: 151 ----------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KID + KVSKIYPLPHMYVVKDLVPDMNNFY QYKSIQPWLQ+
Sbjct: 112 SCAMNIGGVNTLACICKIDTDVKKVSKIYPLPHMYVVKDLVPDMNNFYQQYKSIQPWLQK 171
Query: 194 DKEN-IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
E G Q LQS++DRKKLDGLYECILCACCSTSCPSYWWNG++YLGPAVLMQAYRW+
Sbjct: 172 KTEEPYGQKQNLQSIEDRKKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQAYRWV 231
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKP 312
IDSRDE T RL++L+DPFSVYRCHTIMNCT+TCPK LNPGRAI E+KKLLSGL KKD P
Sbjct: 232 IDSRDEATEKRLDKLRDPFSVYRCHTIMNCTKTCPKSLNPGRAIGELKKLLSGLSKKDAP 291
Query: 313 GLDTAA 318
L A
Sbjct: 292 QLSGEA 297
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 112/175 (64%), Gaps = 34/175 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGGVNTLACI KID + KVSKIYPL
Sbjct: 83 MVLDALIKIKNELDPTLTFRRSCREGICGSCAMNIGGVNTLACICKIDTDVKKVSKIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT----AKNIRSFQ---------- 105
PHMYVVKDLVPDMNNFY QYKSIQ PW T +N++S +
Sbjct: 143 PHMYVVKDLVPDMNNFYQQYKSIQ-----PWLQKKTEEPYGQKQNLQSIEDRKKLDGLYE 197
Query: 106 --LSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
L A S++ P+ Y WN D+ MQ Y+ ++++ +A +K
Sbjct: 198 CILCACCSTSCPS-----------YWWNGDRYLGPAVLMQAYRWVIDSRDEATEK 241
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + KID + KVSKIYPLPHMYVVKDLVPDMNNFY QYKSIQPWL +
Sbjct: 119 GVNTLACICKIDTDVKKVSKIYPLPHMYVVKDLVPDMNNFYQQYKSIQPWLQK 171
>gi|321468348|gb|EFX79333.1| hypothetical protein DAPPUDRAFT_231048 [Daphnia pulex]
Length = 281
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/248 (60%), Positives = 174/248 (70%), Gaps = 50/248 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K FA+YRWNPD +KP +Q Y+VDLN
Sbjct: 34 RIKKFAVYRWNPDVSGDKPHLQTYEVDLNTCGPMVLDALIKIKSEMDPTLTFRRSCREGI 93
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+KID N DK KI+PLPHMYVVKDLVPDM+NFYAQYKSIQPWL
Sbjct: 94 CGSCAMNIGGCNSLACISKIDTNLDKPVKIHPLPHMYVVKDLVPDMSNFYAQYKSIQPWL 153
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
QR D+ +G QYLQS+DDR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 154 QRKDESKLGQKQYLQSVDDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 213
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
W+IDSRDE T DRL++L+DPFSV+RCHTIMNCT+ CPKGLNPG+AIAEIKKLL+G K
Sbjct: 214 WMIDSRDEATKDRLDRLRDPFSVFRCHTIMNCTKACPKGLNPGKAIAEIKKLLTGFATKP 273
Query: 311 KPGLDTAA 318
+P ++ A
Sbjct: 274 EPTMNPAG 281
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/91 (84%), Positives = 81/91 (89%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIK+EMDPTLTFRRSCREGICGSCAMNIGG N+LACISKID N DK KI+PL
Sbjct: 67 MVLDALIKIKSEMDPTLTFRRSCREGICGSCAMNIGGCNSLACISKIDTNLDKPVKIHPL 126
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM+NFYAQYKSIQ PW
Sbjct: 127 PHMYVVKDLVPDMSNFYAQYKSIQ-----PW 152
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID N DK KI+PLPHMYVVKDLVPDM+NFYAQYKSIQPWL R
Sbjct: 108 ACISKIDTNLDKPVKIHPLPHMYVVKDLVPDMSNFYAQYKSIQPWLQR 155
>gi|242025311|ref|XP_002433069.1| succinate dehydrogenase, iron-sulfur subunit [Pediculus humanus
corporis]
gi|212518585|gb|EEB20331.1| succinate dehydrogenase, iron-sulfur subunit [Pediculus humanus
corporis]
Length = 292
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/273 (56%), Positives = 177/273 (64%), Gaps = 48/273 (17%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
+ + + S + AA+ EK +YKTF+IYRW+PD +EKP MQ Y+VDLN
Sbjct: 18 SVRRLHSSKALLAAAREEVKEKSPQYKTFSIYRWDPDAVNEKPRMQSYEVDLNSCGPMVL 77
Query: 150 -------NKID---------------------------------ANDKVSKIYPLPHMYV 169
N+ID + +KIYPLPHMYV
Sbjct: 78 DALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGVNTLACISKISQSGTTKIYPLPHMYV 137
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPDM NFY QYKSIQPWLQR E G QYLQS+ DR LDGLYECILCACCSTS
Sbjct: 138 VKDLVPDMTNFYNQYKSIQPWLQRKNEAEPGTEQYLQSVKDRDVLDGLYECILCACCSTS 197
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPA LMQAYRWIIDSRD+ T +RL+ LKDPFSV+RCHTIMNCT+TCPK
Sbjct: 198 CPSYWWNGDKYLGPAALMQAYRWIIDSRDDNTKERLSNLKDPFSVFRCHTIMNCTKTCPK 257
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
LNPG+AIAE+KKLL GL K P L AL K
Sbjct: 258 SLNPGKAIAELKKLLGGLASKPTPDLQPDALIK 290
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 78/90 (86%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGGVNTLACISKI + +KIYPLP
Sbjct: 75 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-SQSGTTKIYPLP 133
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYVVKDLVPDM NFY QYKSIQ PW
Sbjct: 134 HMYVVKDLVPDMTNFYNQYKSIQ-----PW 158
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 24/121 (19%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++S D L ++K DP +R R+C +G+
Sbjct: 62 MQSYEVDLNSCGPMVLDALIKIKNEIDPTLTFR--------RSCREGI------------ 101
Query: 303 LSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLP 362
G + G++T A + +KIYPLPHMYVVKDLVPDM NFY QYKSIQPWL
Sbjct: 102 -CGSCAMNIGGVNTLACISKISQSGTTKIYPLPHMYVVKDLVPDMTNFYNQYKSIQPWLQ 160
Query: 363 R 363
R
Sbjct: 161 R 161
>gi|72145768|ref|XP_794003.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Strongylocentrotus
purpuratus]
Length = 281
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 153/264 (57%), Positives = 182/264 (68%), Gaps = 55/264 (20%)
Query: 98 AKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------- 149
A+ ++ +L+ A++ PAEK KTF+IYRW+PDK +KP MQ Y VDLN
Sbjct: 18 AQTCQAIRLAQTAAADRPAEK---LKTFSIYRWDPDKEGDKPRMQTYDVDLNTCGPMVLD 74
Query: 150 ------NKID-----------------------------------ANDKVSKIYPLPHMY 168
N++D + K +KIYPLPHMY
Sbjct: 75 ALIKIKNELDPTLTFRRSCREGICGSCSMNINGTNTLACISRIDRGSSKATKIYPLPHMY 134
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQRDKENI--GNAQYLQSLDDRKKLDGLYECILCACCS 226
V+KDLVPDMNNFYAQYKSI+P+LQ+ KE+I G Q++QS+DDR KLDGLYECILCACCS
Sbjct: 135 VIKDLVPDMNNFYAQYKSIEPYLQK-KEDIKYGEKQFIQSIDDRAKLDGLYECILCACCS 193
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE A+RL QL+D FSVYRCHTIMNCT+TC
Sbjct: 194 TSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDELQAERLAQLQDKFSVYRCHTIMNCTKTC 253
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKD 310
PKGLNPGRAI EIKKLL+G K+
Sbjct: 254 PKGLNPGRAIGEIKKLLAGFGTKE 277
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNI G NTLACIS+ID + K +KIYPL
Sbjct: 71 MVLDALIKIKNELDPTLTFRRSCREGICGSCSMNINGTNTLACISRIDRGSSKATKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPDMNNFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDMNNFYAQYKSIEPYL 157
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ +K G MQ Y +++ D L ++K DP +R R+C +
Sbjct: 45 YRWDPDKE-GDKPRMQTYDVDLNTCGPMVLDALIKIKNELDPTLTFR--------RSCRE 95
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKID-ANDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + +ID + K +KIYPLPHMYV+KDLVPD
Sbjct: 96 GI-------------CGSCSMNINGTNTLACISRIDRGSSKATKIYPLPHMYVIKDLVPD 142
Query: 347 MNNFYAQYKSIQPWLPR 363
MNNFYAQYKSI+P+L +
Sbjct: 143 MNNFYAQYKSIEPYLQK 159
>gi|225708162|gb|ACO09927.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Osmerus mordax]
Length = 283
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 183/266 (68%), Gaps = 55/266 (20%)
Query: 93 LGTLTAKNIRS----FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
LG A IRS + A ++A PA +P + K F +YRW+PD +KP MQ Y++DL
Sbjct: 9 LGRCGAVAIRSSVGMVAVRYAQTAAAPASQP-RIKKFQVYRWDPDTTGDKPRMQTYEIDL 67
Query: 149 N------------------------------------------------NKIDAN-DKVS 159
N NKID N KVS
Sbjct: 68 NTCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVS 127
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ N G QYLQ++DDR+KLDGLYE
Sbjct: 128 KIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDEANEGKEQYLQTVDDRQKLDGLYE 187
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+YRCHT
Sbjct: 188 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHT 247
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
IMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 248 IMNCTKTCPKGLNPGKAIAEIKKMMA 273
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N KVSKIYPL
Sbjct: 73 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|288856301|ref|NP_001165802.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Nasonia vitripennis]
Length = 276
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/239 (61%), Positives = 170/239 (71%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------------- 153
K KTF+IYRWNPD P+EKP MQ Y V+LN N+ID
Sbjct: 35 KVKTFSIYRWNPDVPEEKPYMQNYHVNLNKCGPMVLDALIKIKNEIDPTLTFRRSCREGI 94
Query: 154 ----------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+++K SKIYPLPHMY++KDLVPDMNNFY+QY SI+PWL
Sbjct: 95 CGSCAMNIDGTNTLACISSIDTSSNKTSKIYPLPHMYIIKDLVPDMNNFYSQYSSIKPWL 154
Query: 192 QRDKEN-IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
QR K N G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 155 QRKKGNDSGPKQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 214
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD +RL +LKDP+SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL+ + +K
Sbjct: 215 WLIDSRDAAMVERLKKLKDPYSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLAKITEK 273
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 100/146 (68%), Gaps = 23/146 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACIS ID +++K SKIYPL
Sbjct: 68 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACISSIDTSSNKTSKIYPL 127
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI----QRHLG---GPWKILGTLTAK----NIRSFQLSA 108
PHMY++KDLVPDMNNFY+QY SI QR G GP + L ++ + + L A
Sbjct: 128 PHMYIIKDLVPDMNNFYSQYSSIKPWLQRKKGNDSGPKQYLQSIEDRQKLDGLYECILCA 187
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK 134
S++ P+ Y WN DK
Sbjct: 188 CCSTSCPS-----------YWWNGDK 202
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID +++K SKIYPLPHMY++KDLVPDMNNFY+QY SI+PWL R
Sbjct: 109 ACISSIDTSSNKTSKIYPLPHMYIIKDLVPDMNNFYSQYSSIKPWLQR 156
>gi|357613438|gb|EHJ68502.1| succinate dehydrogenase [Danaus plexippus]
Length = 282
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 183/278 (65%), Gaps = 59/278 (21%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------- 150
+R+F S+A V KTFA+YRWNPD+PD+KP Q ++VDL++
Sbjct: 13 QLRTFATSSALGKRV--------KTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDAL 64
Query: 151 ---------------------------------------KIDAN-DKVSKIYPLPHMYVV 170
ID N K +KIYPLPHMYVV
Sbjct: 65 LKIKNEIDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNLSKPTKIYPLPHMYVV 124
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGN--AQYLQSLDDRKKLDGLYECILCACCSTS 228
KDLVPD+ NFY QY+SI+PWLQRD E + Q LQ ++DR KLDGLYEC+LCACCSTS
Sbjct: 125 KDLVPDLTNFYRQYQSIEPWLQRDNEAVKGKETQLLQDVEDRVKLDGLYECVLCACCSTS 184
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD+ A RL++LKD +SVYRCHTIMNCTRTCPK
Sbjct: 185 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDDAAAKRLSKLKDTYSVYRCHTIMNCTRTCPK 244
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAND 326
GLNPG+AIA+IK LLSG+VKK+ P +D + L K A++
Sbjct: 245 GLNPGKAIAQIKTLLSGMVKKEAPIMDPSGLQKQAAHN 282
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 78/91 (85%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE+DPTLTFRRSCREG+CGSCAMNI GVNTLACIS ID N K +KIYPL
Sbjct: 59 MVLDALLKIKNEIDPTLTFRRSCREGVCGSCAMNIDGVNTLACISHIDQNLSKPTKIYPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPD+ NFY QY+SI+ PW
Sbjct: 119 PHMYVVKDLVPDLTNFYRQYQSIE-----PW 144
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + ID N K +KIYPLPHMYVVKDLVPD+ NFY QY+SI+PWL R
Sbjct: 95 GVNTLACISHIDQNLSKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWLQR 147
>gi|334328473|ref|XP_003341083.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Monodelphis domestica]
Length = 282
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 180/263 (68%), Gaps = 53/263 (20%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
+LG IR A ++A A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 14 LLGVALLPRIRVQACRGAQTAATAA---PRLKKFAIYRWDPDKTGDKPRMQTYEVDLNKC 70
Query: 150 ------------NKIDAN-----------------------------------DKVSKIY 162
N++DA +KVSKIY
Sbjct: 71 GPMVLDALIKIKNEVDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIY 130
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYV+KDLVPD+NNFYAQYKSIQP+L++ D+ G AQYLQS++DR+KLDGLYECIL
Sbjct: 131 PLPHMYVMKDLVPDLNNFYAQYKSIQPYLKKKDESQEGKAQYLQSMEDREKLDGLYECIL 190
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPFS+YRCHTIMN
Sbjct: 191 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAQLQDPFSLYRCHTIMN 250
Query: 282 CTRTCPKGLNPGRAIAEIKKLLS 304
CTRTCPKGLNPG+AIAEIKK+++
Sbjct: 251 CTRTCPKGLNPGKAIAEIKKMMA 273
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD+NNFYAQYKSIQ +L
Sbjct: 133 PHMYVMKDLVPDLNNFYAQYKSIQPYL 159
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L +
Sbjct: 110 GNTLACTRRIDTNLNKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYLKK 161
>gi|387914762|gb|AFK10990.1| succinate dehydrogenase [Callorhinchus milii]
Length = 279
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/248 (59%), Positives = 174/248 (70%), Gaps = 50/248 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L A+ S+A A + K FAIYRWNPDKP +KP MQ Y++DLN
Sbjct: 22 LQASRSAATEAAPATRIKKFAIYRWNPDKPGDKPRMQTYEIDLNTCGPMVLDALIKIKNE 81
Query: 151 ---------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPD 176
KID N +KVSKIYPLPHMYVVKDLVPD
Sbjct: 82 MDSTLTFRRSCREGICGSCAMNINGGNTLACTCKIDTNINKVSKIYPLPHMYVVKDLVPD 141
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSIQP+L++ D+ G QY+QS++DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 142 LSNFYAQYKSIQPYLKKKDESQEGKQQYVQSIEDRQKLDGLYECILCACCSTSCPSYWWN 201
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVLMQAYRW+IDSRDE T +RL QL+DPFS+YRCHTIMNCT+ CPKGLNPG+A
Sbjct: 202 GDKYLGPAVLMQAYRWMIDSRDEFTEERLAQLQDPFSLYRCHTIMNCTQACPKGLNPGKA 261
Query: 296 IAEIKKLL 303
IAEIKK++
Sbjct: 262 IAEIKKMM 269
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC KID N +KVSKIYPL
Sbjct: 70 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTCKIDTNINKVSKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSIQ +L
Sbjct: 130 PHMYVVKDLVPDLSNFYAQYKSIQPYL 156
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 19/133 (14%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y WN +K G MQ Y +++ D L ++K+ + + R+C +G+
Sbjct: 44 YRWNPDK-PGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMD-----STLTFRRSCREGIC 97
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNF 350
A+ ++G G A KID N +KVSKIYPLPHMYVVKDLVPD++NF
Sbjct: 98 GSCAMN-----ING-------GNTLACTCKIDTNINKVSKIYPLPHMYVVKDLVPDLSNF 145
Query: 351 YAQYKSIQPWLPR 363
YAQYKSIQP+L +
Sbjct: 146 YAQYKSIQPYLKK 158
>gi|326932226|ref|XP_003212221.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like isoform 1 [Meleagris
gallopavo]
Length = 281
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 183/268 (68%), Gaps = 58/268 (21%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P ++LG R Q +AAA+S + K F+IYRW+PDKP +KP MQ Y+V
Sbjct: 13 GVPARLLGARLRPICRGAQTAAAATSRI--------KKFSIYRWDPDKPGDKPRMQTYEV 64
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 65 DLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSK 124
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
++KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 125 ITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGL 184
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPFS+YRC
Sbjct: 185 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRC 244
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 245 HTIMNCTRTCPKGLNPGKAIAEIKKMMA 272
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K++KIYPL
Sbjct: 72 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKITKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 132 PHMYVVKDLVPDLSNFYAQYKSIEPYL 158
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K++KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 109 GNTLACTKKIDPDLSKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 160
>gi|308321504|gb|ADO27903.1| mitochondrial succinate dehydrogenase iron-sulfur subunit
[Ictalurus furcatus]
Length = 280
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/261 (57%), Positives = 180/261 (68%), Gaps = 53/261 (20%)
Query: 101 IRSFQLSAAAS--SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
+RS L+A+A A +P + KTF IYRW+PDKP +KP MQ Y +DLN
Sbjct: 16 MRSSALTASARYMQTAAAAQP-RIKTFRIYRWDPDKPGDKPHMQTYDIDLNTCGPMVLDA 74
Query: 150 ---------------------------------------NKIDAN-DKVSKIYPLPHMYV 169
N+ID N KVSKIYPLPHMYV
Sbjct: 75 LIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACLNRIDTNTSKVSKIYPLPHMYV 134
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPDMNNFYAQYK I+P+L+R D+ G QYLQS+DDR+KLDGLYECILCACCSTS
Sbjct: 135 VKDLVPDMNNFYAQYKLIEPYLKRKDESQQGKQQYLQSVDDRQKLDGLYECILCACCSTS 194
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRW++DSRDE T +RL +L+DPFS+YRCHTI+NCT+TCPK
Sbjct: 195 CPSYWWNGDKYLGPAVLMQAYRWMVDSRDEYTEERLAKLQDPFSLYRCHTILNCTKTCPK 254
Query: 289 GLNPGRAIAEIKKLLSGLVKK 309
GLNPG+AIAEIKK+++ +K
Sbjct: 255 GLNPGKAIAEIKKMMATYKEK 275
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+++ID N KVSKIYPL
Sbjct: 70 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACLNRIDTNTSKVSKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDMNNFYAQYK I+ +L
Sbjct: 130 PHMYVVKDLVPDMNNFYAQYKLIEPYL 156
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L++ID N KVSKIYPLPHMYVVKDLVPDMNNFYAQYK I+P+L R
Sbjct: 107 GNTLACLNRIDTNTSKVSKIYPLPHMYVVKDLVPDMNNFYAQYKLIEPYLKR 158
>gi|318904081|ref|NP_001187800.1| mitochondrial succinate dehydrogenase (ubiquinone) iron-sulfur
subunit [Ictalurus punctatus]
gi|308324003|gb|ADO29137.1| mitochondrial succinate dehydrogenase (ubiquinone) iron-sulfur
subunit [Ictalurus punctatus]
Length = 280
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/271 (55%), Positives = 183/271 (67%), Gaps = 63/271 (23%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKY-----------KTFAIYRWNPDKPDEKPTMQEYKVDL 148
++R ++A SSA+PA A+Y KTF IYRW+PDKP +KP MQ Y +DL
Sbjct: 7 SLRRSGVAAMRSSALPAS--ARYMQTAAAAQPRIKTFQIYRWDPDKPGDKPHMQTYDIDL 64
Query: 149 N------------------------------------------------NKIDAN-DKVS 159
N N+ID N KVS
Sbjct: 65 NTCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACLNRIDTNTSKVS 124
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYVVKDLVPDMNNFYAQYK I+P+L+R D+ G QYLQS+DDR+KLDGLYE
Sbjct: 125 KIYPLPHMYVVKDLVPDMNNFYAQYKLIEPYLKRKDESQQGKEQYLQSVDDRQKLDGLYE 184
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
C+LCACCSTSCPSYWWNG+KYLGPAVLMQAYRW++DSRDE T +RL +L+DPFS+YRCHT
Sbjct: 185 CVLCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMVDSRDEYTEERLAKLQDPFSLYRCHT 244
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
I+NCT++CPKGLNPG+AIAEIKK+++ +K
Sbjct: 245 ILNCTKSCPKGLNPGKAIAEIKKMMATYKEK 275
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+++ID N KVSKIYPL
Sbjct: 70 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACLNRIDTNTSKVSKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDMNNFYAQYK I+ +L
Sbjct: 130 PHMYVVKDLVPDMNNFYAQYKLIEPYL 156
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L++ID N KVSKIYPLPHMYVVKDLVPDMNNFYAQYK I+P+L R
Sbjct: 107 GNTLACLNRIDTNTSKVSKIYPLPHMYVVKDLVPDMNNFYAQYKLIEPYLKR 158
>gi|392883940|gb|AFM90802.1| succinate dehydrogenase [Callorhinchus milii]
Length = 279
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/248 (59%), Positives = 173/248 (69%), Gaps = 50/248 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L A+ S+A A + K FAIYRWNPDKP +KP MQ Y++DLN
Sbjct: 22 LQASRSAATEAAPATRIKKFAIYRWNPDKPGDKPRMQTYEIDLNTCGPMVLDALIKIKNE 81
Query: 151 ---------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPD 176
KID N +KVSKIYPLPHMYVVKDLVPD
Sbjct: 82 MDSTLTFRRSCREGICGSCAMNINGGNTLACTCKIDTNINKVSKIYPLPHMYVVKDLVPD 141
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSIQP+L++ D+ G QY+QS++DR+KLDGLY CILCACCSTSCPSYWWN
Sbjct: 142 LSNFYAQYKSIQPYLKKKDESQEGKQQYVQSIEDRQKLDGLYGCILCACCSTSCPSYWWN 201
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVLMQAYRW+IDSRDE T +RL QL+DPFS+YRCHTIMNCT+ CPKGLNPG+A
Sbjct: 202 GDKYLGPAVLMQAYRWMIDSRDEFTEERLAQLQDPFSLYRCHTIMNCTQACPKGLNPGKA 261
Query: 296 IAEIKKLL 303
IAEIKK++
Sbjct: 262 IAEIKKMM 269
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC KID N +KVSKIYPL
Sbjct: 70 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTCKIDTNINKVSKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSIQ +L
Sbjct: 130 PHMYVVKDLVPDLSNFYAQYKSIQPYL 156
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 19/133 (14%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y WN +K G MQ Y +++ D L ++K+ + + R+C +G+
Sbjct: 44 YRWNPDK-PGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMD-----STLTFRRSCREGIC 97
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNF 350
A+ ++G G A KID N +KVSKIYPLPHMYVVKDLVPD++NF
Sbjct: 98 GSCAMN-----ING-------GNTLACTCKIDTNINKVSKIYPLPHMYVVKDLVPDLSNF 145
Query: 351 YAQYKSIQPWLPR 363
YAQYKSIQP+L +
Sbjct: 146 YAQYKSIQPYLKK 158
>gi|348523371|ref|XP_003449197.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Oreochromis niloticus]
Length = 259
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/251 (58%), Positives = 177/251 (70%), Gaps = 51/251 (20%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------- 149
A ++A PA +P + K F +YRW+PDKP +KP MQ Y++DLN
Sbjct: 5 AQTAAAPAPEP-RIKKFQVYRWDPDKPGDKPRMQTYEIDLNTCGPMVLDALIKIKNEIDP 63
Query: 150 -----------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNN 179
NKID N K +KIYPLPHMYVVKDLVPDM+N
Sbjct: 64 TLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSN 123
Query: 180 FYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FYAQYKSI+P+L++ D+ G QY QS++DR+KLDGLYECILCACCSTSCPSYWWNG+K
Sbjct: 124 FYAQYKSIEPYLKKKDESQEGKEQYFQSVEDRQKLDGLYECILCACCSTSCPSYWWNGDK 183
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPAVLMQAYRW+IDSRDE T DRL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAE
Sbjct: 184 YLGPAVLMQAYRWMIDSRDEFTEDRLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAE 243
Query: 299 IKKLLSGLVKK 309
IKK+++ +K
Sbjct: 244 IKKMMATYKEK 254
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 49 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPL 108
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 109 PHMYVVKDLVPDMSNFYAQYKSIEPYL 135
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 25/136 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ +K G MQ Y +++ D L ++K DP +R R+C +
Sbjct: 23 YRWDPDK-PGDKPRMQTYEIDLNTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 73
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ ++G G A L+KID N K +KIYPLPHMYVVKDLVPDM
Sbjct: 74 GICGSCAMN-----ING-------GNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDM 121
Query: 348 NNFYAQYKSIQPWLPR 363
+NFYAQYKSI+P+L +
Sbjct: 122 SNFYAQYKSIEPYLKK 137
>gi|391336814|ref|XP_003742773.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Metaseiulus occidentalis]
Length = 285
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/271 (55%), Positives = 180/271 (66%), Gaps = 49/271 (18%)
Query: 93 LGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-- 150
LG +N+ + ++ AA++A EKP KTF +YR++P+K +KP MQ Y VDLN
Sbjct: 10 LGASQTRNVTTGAVTRAAAAAAVQEKPELKKTFTVYRFDPEKKGDKPRMQTYTVDLNQCG 69
Query: 151 ----------------------------------------------KIDANDKVSKIYPL 164
KID + KIYPL
Sbjct: 70 PMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACICKIDKDPADLKIYPL 129
Query: 165 PHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCA 223
PHMYVVKDLVPDM+ FYAQY+SI+PWLQ+ + + G Q LQS+ DR KLDGLYECILCA
Sbjct: 130 PHMYVVKDLVPDMSLFYAQYRSIEPWLQKKTQVDYGEKQNLQSVKDRSKLDGLYECILCA 189
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRDE TA+RL +L+DPFSVYRCHTIMNCT
Sbjct: 190 CCSTSCPSYWWNPDKYLGPAVLMQAYRWVIDSRDENTAERLKRLQDPFSVYRCHTIMNCT 249
Query: 284 RTCPKGLNPGRAIAEIKKLLSGLVKKDKPGL 314
+TCPKGLNPGR+IAE+KKL+SG+ KK P L
Sbjct: 250 KTCPKGLNPGRSIAELKKLMSGIAKKGTPEL 280
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 102/159 (64%), Gaps = 27/159 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KID + KIYPLP
Sbjct: 71 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACICKIDKDPADLKIYPLP 130
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT----AKNIRSFQ----------- 105
HMYVVKDLVPDM+ FYAQY+SI+ PW T +N++S +
Sbjct: 131 HMYVVKDLVPDMSLFYAQYRSIE-----PWLQKKTQVDYGEKQNLQSVKDRSKLDGLYEC 185
Query: 106 -LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ P KY A+ YRW D DE
Sbjct: 186 ILCACCSTSCPSYWWNPDKYLGPAVLMQAYRWVIDSRDE 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID + KIYPLPHMYVVKDLVPDM+ FYAQY+SI+PWL +
Sbjct: 112 ACICKIDKDPADLKIYPLPHMYVVKDLVPDMSLFYAQYRSIEPWLQK 158
>gi|348507865|ref|XP_003441476.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Oreochromis niloticus]
Length = 283
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/251 (57%), Positives = 178/251 (70%), Gaps = 51/251 (20%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------- 149
A ++A PA +P + K F +YRW+PD P +KP MQ Y++DLN
Sbjct: 29 AQTAAAPAVQP-RIKKFQVYRWDPDTPGDKPRMQTYEIDLNTCGPMVLDALIKIKNEIDP 87
Query: 150 -----------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNN 179
NKID+N K +KIYPLPHMYVVKDLVPDM+N
Sbjct: 88 TLTFRRSCREGICGSCAMNIEGGNTLACLNKIDSNVSKPTKIYPLPHMYVVKDLVPDMSN 147
Query: 180 FYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+K
Sbjct: 148 FYAQYKSIEPYLKKKDESKEGKEQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNGDK 207
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAE
Sbjct: 208 YLGPAVLMQAYRWMIDSRDEYTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAE 267
Query: 299 IKKLLSGLVKK 309
IKK+++ +K
Sbjct: 268 IKKMMATYKEK 278
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC++KID+N K +KIYPL
Sbjct: 73 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGGNTLACLNKIDSNVSKPTKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID+N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDSNVSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|773300|gb|AAA80581.1| succinate dehydrogenase iron-protein subunit B [Homo sapiens]
Length = 281
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 186/280 (66%), Gaps = 61/280 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R L P LG + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRL--PATTLGGACLQASRGAQTAAATAPRI--------KKFAIYRWDPDKAGDKPH 57
Query: 141 MQEYKVDLNNK------------------------------------------------- 151
MQ Y+VDLNN+
Sbjct: 58 MQTYEVDLNNRCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRR 117
Query: 152 IDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDD 209
ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++
Sbjct: 118 IDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEE 177
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+D
Sbjct: 178 REKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQD 237
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
PFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 238 PFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 277
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 72 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 132 PHMYVIKDLVPDLSNFYAQYKSIEPYL 158
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 109 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 160
>gi|297666268|ref|XP_002811455.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial isoform 1 [Pongo abelii]
gi|395731095|ref|XP_003775842.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial isoform 2 [Pongo abelii]
Length = 280
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/279 (54%), Positives = 186/279 (66%), Gaps = 60/279 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R L P LG + R Q +AAA+ + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRL--PATTLGGACLQASRGTQTAAAAAPRI--------KKFAIYRWDPDKAGDKPH 57
Query: 141 MQEYKVDLN------------------------------------------------NKI 152
MQ Y+VDLN +I
Sbjct: 58 MQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 153 DAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
D N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R
Sbjct: 118 DTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEER 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|209915614|ref|NP_001094009.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Rattus norvegicus]
gi|205371749|sp|P21913.2|DHSB_RAT RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|149024457|gb|EDL80954.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
(predicted), isoform CRA_d [Rattus norvegicus]
gi|165970950|gb|AAI58621.1| Sdhb protein [Rattus norvegicus]
Length = 282
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 176/260 (67%), Gaps = 50/260 (19%)
Query: 95 TLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----- 149
+ TA Q A + A + KTFAIYRW+PDK +KP MQ YKVDLN
Sbjct: 14 SATALGRVGLQFQACREAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPM 73
Query: 150 ---------NKIDAN-----------------------------------DKVSKIYPLP 165
N+ID+ KVSKIYPLP
Sbjct: 74 VLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLP 133
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCAC 224
HMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCAC
Sbjct: 134 HMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCAC 193
Query: 225 CSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTR 284
CSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL +L+DPFS+YRCHTIMNCT+
Sbjct: 194 CSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQ 253
Query: 285 TCPKGLNPGRAIAEIKKLLS 304
TCPKGLNPG+AIAEIKK+++
Sbjct: 254 TCPKGLNPGKAIAEIKKMMA 273
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
>gi|363741789|ref|XP_003642552.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like isoform 1 [Gallus gallus]
Length = 281
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 180/268 (67%), Gaps = 58/268 (21%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P + L R Q +AAA+S + K F+IYRW+PDKP +KP MQ Y+V
Sbjct: 13 GVPARFLRAGLRPICRGAQTAAAATSRI--------KKFSIYRWDPDKPGDKPRMQTYEV 64
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 65 DLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSK 124
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
+KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 125 TTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGL 184
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPFS+YRC
Sbjct: 185 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRC 244
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 245 HTIMNCTRTCPKGLNPGKAIAEIKKMMA 272
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K +KIYPL
Sbjct: 72 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 132 PHMYVVKDLVPDLSNFYAQYKSIEPYL 158
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 109 GNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 160
>gi|665925|gb|AAA81167.1| succinate dehydrogenase iron-protein subunit [Homo sapiens]
Length = 280
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 183/274 (66%), Gaps = 60/274 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R L P LG + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRL--PATTLGGACLQASRGAQTAAATAPRI--------KKFAIYRWDPDKAGDKPH 57
Query: 141 MQEYKVDLN------------------------------------------------NKI 152
MQ YKVDLN +I
Sbjct: 58 MQTYKVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 153 DAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
D N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R
Sbjct: 118 DTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEER 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 271
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|363741791|ref|XP_003642553.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like isoform 2 [Gallus gallus]
Length = 290
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 176/253 (69%), Gaps = 58/253 (22%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
R Q +AAA+S + K F+IYRW+PDKP +KP MQ Y+VDLN
Sbjct: 37 RGAQTAAAATSRI--------KKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIK 88
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N++D+ K +KIYPLPHMYVVKD
Sbjct: 89 IKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKD 148
Query: 173 LVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
LVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPS
Sbjct: 149 LVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPS 208
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPFS+YRCHTIMNCTRTCPKGLN
Sbjct: 209 YWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLN 268
Query: 292 PGRAIAEIKKLLS 304
PG+AIAEIKK+++
Sbjct: 269 PGKAIAEIKKMMA 281
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K +KIYPL
Sbjct: 81 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPL 140
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 141 PHMYVVKDLVPDLSNFYAQYKSIEPYL 167
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 118 GNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 169
>gi|124249440|ref|NP_001074344.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Gallus gallus]
gi|82175585|sp|Q9YHT2.1|DHSB_CHICK RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|3851612|gb|AAC72372.1| succinate dehydrogenase Ip subunit [Gallus gallus]
Length = 290
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 176/253 (69%), Gaps = 58/253 (22%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
R Q +AAA+S + K F+IYRW+PDKP +KP MQ Y+VDLN
Sbjct: 37 RGAQTAAAATSRI--------KKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIK 88
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N++D+ K +KIYPLPHMYVVKD
Sbjct: 89 IKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKD 148
Query: 173 LVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
LVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPS
Sbjct: 149 LVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPS 208
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPFS+YRCHTIMNCTRTCPKGLN
Sbjct: 209 YWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLN 268
Query: 292 PGRAIAEIKKLLS 304
PG+AIAEIKK+++
Sbjct: 269 PGKAIAEIKKMMA 281
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K +KIYPL
Sbjct: 81 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPL 140
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 141 PHMYVVKDLVPDLSNFYAQYKSIEPYL 167
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 118 GNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 169
>gi|432864332|ref|XP_004070269.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like isoform 1 [Oryzias latipes]
Length = 280
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/259 (56%), Positives = 179/259 (69%), Gaps = 56/259 (21%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+RS Q AAA A +P + K F +YRW+PD+P +KP MQ Y+VDLN
Sbjct: 22 VRSTQTVAAA-----APEP-RMKAFQVYRWDPDRPGDKPRMQTYEVDLNTCGPMVLDALI 75
Query: 150 -------------------------------------NKIDAND-KVSKIYPLPHMYVVK 171
N+I+AN K +KIYPLPHMYVVK
Sbjct: 76 KIKNEMDPTLTFRRSCREGICGSCAMNINGENTLACLNRINANSSKATKIYPLPHMYVVK 135
Query: 172 DLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
DLVPDM+NFYAQYKSI+P+L++ D G QY QS++DR+KLDGLYECILCACCSTSCP
Sbjct: 136 DLVPDMSNFYAQYKSIEPYLKKKDGSQEGKTQYFQSVEDRQKLDGLYECILCACCSTSCP 195
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGL
Sbjct: 196 SYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGL 255
Query: 291 NPGRAIAEIKKLLSGLVKK 309
NPG+AIAEIKK+++ +K
Sbjct: 256 NPGKAIAEIKKMMATYREK 274
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+++I+AN K +KIYPL
Sbjct: 69 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGENTLACLNRINANSSKATKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 129 PHMYVVKDLVPDMSNFYAQYKSIEPYL 155
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L++I+AN K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 ACLNRINANSSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 157
>gi|351711828|gb|EHB14747.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Heterocephalus glaber]
Length = 277
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 178/270 (65%), Gaps = 59/270 (21%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P +LG + R Q +AA + K FAIYRW+PDK +KP MQ Y+VDL
Sbjct: 14 PAAVLGGTCLQASRGAQTAAAP----------RIKKFAIYRWDPDKTGDKPHMQTYEVDL 63
Query: 149 N------------------------------------------------NKIDAN-DKVS 159
N KID N DKVS
Sbjct: 64 NKCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRKIDTNLDKVS 123
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMYV+KDLVPD+NNFYAQYKSI+P+L++ E QYLQS++DR+KLDGLYEC
Sbjct: 124 KIYPLPHMYVIKDLVPDLNNFYAQYKSIEPYLKKKDEPKEGQQYLQSIEDREKLDGLYEC 183
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTI
Sbjct: 184 ILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTI 243
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
MNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 244 MNCTQTCPKGLNPGKAIAEIKKMMATYKEK 273
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC KID N DKVSKIYPL
Sbjct: 69 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRKIDTNLDKVSKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD+NNFYAQYKSI+ +L
Sbjct: 129 PHMYVIKDLVPDLNNFYAQYKSIEPYL 155
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID N DKVSKIYPLPHMYV+KDLVPD+NNFYAQYKSI+P+L +
Sbjct: 106 GNTLACTRKIDTNLDKVSKIYPLPHMYVIKDLVPDLNNFYAQYKSIEPYLKK 157
>gi|395522158|ref|XP_003765107.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Sarcophilus harrisii]
Length = 274
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 171/239 (71%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K FAIYRW+PDKP +KP MQ Y++DLN
Sbjct: 32 RLKKFAIYRWDPDKPGDKPRMQTYEIDLNRCGPMVLDALIKIKNEMDATLTFRRSCREGI 91
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID+N KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L
Sbjct: 92 CGSCAMNINGGNTLACTRRIDSNLSKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYL 151
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 152 KKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 211
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ T +RL QL+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 212 WMIDSRDDFTEERLAQLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYKEK 270
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID+N KVSKIYPL
Sbjct: 65 MVLDALIKIKNEMDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDSNLSKVSKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD+NNFYAQYKSIQ +L
Sbjct: 125 PHMYVMKDLVPDLNNFYAQYKSIQPYL 151
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID+N KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L +
Sbjct: 102 GNTLACTRRIDSNLSKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYLKK 153
>gi|115387094|ref|NP_002991.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Homo sapiens]
gi|114554302|ref|XP_001155516.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial isoform 3 [Pan troglodytes]
gi|397486771|ref|XP_003814497.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial isoform 1 [Pan paniscus]
gi|397486773|ref|XP_003814498.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial isoform 2 [Pan paniscus]
gi|410032363|ref|XP_003949355.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Pan troglodytes]
gi|426328051|ref|XP_004024816.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Gorilla gorilla gorilla]
gi|20455488|sp|P21912.3|DHSB_HUMAN RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|14043765|gb|AAH07840.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Homo
sapiens]
gi|119615234|gb|EAW94828.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_a [Homo sapiens]
gi|189065269|dbj|BAG34992.1| unnamed protein product [Homo sapiens]
gi|410208022|gb|JAA01230.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Pan
troglodytes]
gi|410257414|gb|JAA16674.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Pan
troglodytes]
gi|410288076|gb|JAA22638.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Pan
troglodytes]
gi|410337505|gb|JAA37699.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Pan
troglodytes]
Length = 280
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/279 (53%), Positives = 185/279 (66%), Gaps = 60/279 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R L P LG + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRL--PATTLGGACLQASRGAQTAAATAPRI--------KKFAIYRWDPDKAGDKPH 57
Query: 141 MQEYKVDLN------------------------------------------------NKI 152
MQ Y+VDLN +I
Sbjct: 58 MQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 153 DAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
D N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R
Sbjct: 118 DTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEER 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|348571299|ref|XP_003471433.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Cavia porcellus]
Length = 280
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 144/254 (56%), Positives = 175/254 (68%), Gaps = 50/254 (19%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------- 149
L A + A++ + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 23 LQACRGAQTAADRAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNE 82
Query: 150 --------------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPD 176
+ID N DKVSKIYPLPHMYV+KDLVPD
Sbjct: 83 MDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPD 142
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
+NNFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 143 LNNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWN 202
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLNPG+A
Sbjct: 203 ADKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKA 262
Query: 296 IAEIKKLLSGLVKK 309
IAEIKK+++ +K
Sbjct: 263 IAEIKKMMATYKEK 276
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 71 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD+NNFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 131 PHMYVIKDLVPDLNNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCA 190
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 191 CCSTSCPS-----------YWWNADKYLGPAVLMQAYRWMIDSRDDFTEE 229
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD+NNFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLNNFYAQYKSIEPYLKK 159
>gi|403287555|ref|XP_003935009.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Saimiri boliviensis boliviensis]
Length = 266
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/260 (55%), Positives = 176/260 (67%), Gaps = 50/260 (19%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------- 149
N+ A + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 3 NLTLVHYQACRGAQTTAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDAL 62
Query: 150 ----NKIDAN-----------------------------------DKVSKIYPLPHMYVV 170
N+ID+ DKVSKIYPLPHMYV+
Sbjct: 63 IKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVI 122
Query: 171 KDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSC
Sbjct: 123 KDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCSTSC 182
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRTCPKG
Sbjct: 183 PSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKG 242
Query: 290 LNPGRAIAEIKKLLSGLVKK 309
LNPG+AIAEIKK+++ +K
Sbjct: 243 LNPGKAIAEIKKMMATYKEK 262
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 57 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 117 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCA 176
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 177 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 215
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 94 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 145
>gi|444728117|gb|ELW68581.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Tupaia chinensis]
Length = 280
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 184/274 (67%), Gaps = 60/274 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R + P LG + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRV--PAAALGGTCLQACRGAQTAAATAPRI--------KKFAIYRWDPDKAGDKPR 57
Query: 141 MQEYKVDLN--------------NKIDAN------------------------------- 155
MQ Y++DLN N+ID+
Sbjct: 58 MQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 156 ----DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
+KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R
Sbjct: 118 DTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEER 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 271
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCA 190
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 191 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 229
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|12833468|dbj|BAB22534.1| unnamed protein product [Mus musculus]
Length = 282
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 178/268 (66%), Gaps = 56/268 (20%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P +LG + Q A + A K K FAIYRW+PDK +KP MQ Y+V
Sbjct: 12 GFPAAVLGRV------GLQFQACRGAQTAAAAAPKIKKFAIYRWDPDKTGDKPRMQTYEV 65
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 66 DLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSK 125
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
VSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 126 VSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGL 185
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFSVYRC
Sbjct: 186 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRC 245
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 246 HTIMNCTQTCPKGLNPGKAIAEIKKMMA 273
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
>gi|356582306|ref|NP_001239146.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Canis lupus familiaris]
Length = 280
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 182/274 (66%), Gaps = 60/274 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R P LG + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLKRRF--PAAALGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPH 57
Query: 141 MQEYKVDLN--------------NKIDAN------------------------------- 155
MQ Y++DLN N+ID+
Sbjct: 58 MQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 156 ----DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR
Sbjct: 118 DTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDR 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 271
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|85544001|pdb|1YQ3|B Chain B, Avian Respiratory Complex Ii With Oxaloacetate And
Ubiquinone
gi|85544005|pdb|1YQ4|B Chain B, Avian Respiratory Complex Ii With 3-Nitropropionate And
Ubiquinone
gi|85544666|pdb|2FBW|B Chain B, Avian Respiratory Complex Ii With Carboxin Bound
gi|85544670|pdb|2FBW|O Chain O, Avian Respiratory Complex Ii With Carboxin Bound
gi|110590575|pdb|2H88|B Chain B, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom
Resolution
gi|110590579|pdb|2H88|O Chain O, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom
Resolution
gi|110590583|pdb|2H89|B Chain B, Avian Respiratory Complex Ii With Malonate Bound
gi|304445605|pdb|2WQY|B Chain B, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
gi|304445609|pdb|2WQY|O Chain O, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
Length = 252
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/255 (56%), Positives = 177/255 (69%), Gaps = 58/255 (22%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------N 150
Q +AAA+S + K F+IYRW+PDKP +KP MQ Y+VDLN N
Sbjct: 2 QTAAAATSRI--------KKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKN 53
Query: 151 KIDAN-----------------------------------DKVSKIYPLPHMYVVKDLVP 175
++D+ K +KIYPLPHMYVVKDLVP
Sbjct: 54 ELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVP 113
Query: 176 DMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
D++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWW
Sbjct: 114 DLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWW 173
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
NG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPFS+YRCHTIMNCTRTCPKGLNPG+
Sbjct: 174 NGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGK 233
Query: 295 AIAEIKKLLSGLVKK 309
AIAEIKK+++ +K
Sbjct: 234 AIAEIKKMMATYKEK 248
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K +KIYPL
Sbjct: 43 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPL 102
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 103 PHMYVVKDLVPDLSNFYAQYKSIEPYL 129
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 80 GNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 131
>gi|410966092|ref|XP_003989572.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Felis catus]
Length = 281
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 181/274 (66%), Gaps = 60/274 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R P LG + R Q AA + + K FAIYRW+PDK +KP
Sbjct: 9 SLRRRF--PATALGGACLQACRGAQTVAATAPRI--------KKFAIYRWDPDKTGDKPR 58
Query: 141 MQEYKVDLN--------------NKIDAN------------------------------- 155
MQ Y++DLN N+ID+
Sbjct: 59 MQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 118
Query: 156 ----DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR
Sbjct: 119 DTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDR 178
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 179 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 238
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 239 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 272
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 72 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 132 PHMYVIKDLVPDLSNFYAQYKSIEPYL 158
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 109 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 160
>gi|260790799|ref|XP_002590428.1| hypothetical protein BRAFLDRAFT_273662 [Branchiostoma floridae]
gi|229275622|gb|EEN46439.1| hypothetical protein BRAFLDRAFT_273662 [Branchiostoma floridae]
Length = 278
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 174/260 (66%), Gaps = 54/260 (20%)
Query: 101 IRSFQLSAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------- 150
I + QLS A +A P E+P + K F IYRW+PDK +KP MQEY VDLNN
Sbjct: 20 IVALQLSRGAQTAAAAAPQEQP-RLKKFKIYRWDPDKMGDKPRMQEYSVDLNNCGPMVLD 78
Query: 151 -----------------------------------------KIDAN-DKVSKIYPLPHMY 168
+ID K +KIYPLPHMY
Sbjct: 79 ALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISRIDTKLSKATKIYPLPHMY 138
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
VVKDLVPDM+NFYAQY+SI+P+L+R D G Q QS+DDR KLDGLYECILCACCST
Sbjct: 139 VVKDLVPDMSNFYAQYRSIEPYLKRKDGIQQGEEQLFQSVDDRAKLDGLYECILCACCST 198
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ +RL +L+DPFSVYRCHTIMNCT+TCP
Sbjct: 199 SCPSYWWNGDKYLGPAVLMQAYRWMIDSRDQFRKERLEKLQDPFSVYRCHTIMNCTKTCP 258
Query: 288 KGLNPGRAIAEIKKLLSGLV 307
KGLNPGRAIAEIKK+++GL
Sbjct: 259 KGLNPGRAIAEIKKMMAGLA 278
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACIS+ID K +KIYPL
Sbjct: 75 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISRIDTKLSKATKIYPL 134
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQY+SI+ +L
Sbjct: 135 PHMYVVKDLVPDMSNFYAQYRSIEPYL 161
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ +K +G MQ Y +++ D L ++K DP +R R+C +
Sbjct: 49 YRWDPDK-MGDKPRMQEYSVDLNNCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 99
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + +ID K +KIYPLPHMYVVKDLVPD
Sbjct: 100 GI-------------CGSCAMNIGGTNTLACISRIDTKLSKATKIYPLPHMYVVKDLVPD 146
Query: 347 MNNFYAQYKSIQPWLPR 363
M+NFYAQY+SI+P+L R
Sbjct: 147 MSNFYAQYRSIEPYLKR 163
>gi|34328286|ref|NP_075863.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Mus musculus]
gi|51701449|sp|Q9CQA3.1|DHSB_MOUSE RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|12834257|dbj|BAB22842.1| unnamed protein product [Mus musculus]
gi|12844591|dbj|BAB26422.1| unnamed protein product [Mus musculus]
gi|15488736|gb|AAH13509.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Mus
musculus]
gi|30354322|gb|AAH51934.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Mus
musculus]
gi|74141897|dbj|BAE41016.1| unnamed protein product [Mus musculus]
gi|74225534|dbj|BAE31674.1| unnamed protein product [Mus musculus]
gi|148681389|gb|EDL13336.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_f [Mus musculus]
Length = 282
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/268 (54%), Positives = 178/268 (66%), Gaps = 56/268 (20%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P +LG + Q A + A + K FAIYRW+PDK +KP MQ Y+V
Sbjct: 12 GFPAAVLGRV------GLQFQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPRMQTYEV 65
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 66 DLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSK 125
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
VSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 126 VSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGL 185
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFSVYRC
Sbjct: 186 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRC 245
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 246 HTIMNCTQTCPKGLNPGKAIAEIKKMMA 273
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
>gi|344283465|ref|XP_003413492.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Loxodonta africana]
Length = 280
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/271 (54%), Positives = 180/271 (66%), Gaps = 58/271 (21%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y+VDL
Sbjct: 14 PATTLGGACLQACRGAQTAAAVAPRI--------KKFAIYRWDPDKAGDKPHMQTYEVDL 65
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+IDA +KVS
Sbjct: 66 NKCGPMVLDALIKIKNEIDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVS 125
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYE
Sbjct: 126 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYE 185
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 186 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 245
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
IMNCTR CPKGLNPG+AIAEIKK+++ +K
Sbjct: 246 IMNCTRACPKGLNPGKAIAEIKKMMATYKEK 276
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|180917|gb|AAA35708.1| succinate-ubiquinone oxidoreductase Ip subunit precursor, partial
[Homo sapiens]
gi|220070|dbj|BAA01089.1| succinate-ubiquinone oxidoreductase iron sulfur subunit [Homo
sapiens]
Length = 262
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/254 (56%), Positives = 175/254 (68%), Gaps = 50/254 (19%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------- 149
L A+ + A + K FAIYRW+PDK +KP MQ YKVDLN
Sbjct: 5 LQASRGAQTAAATAPRIKKFAIYRWDPDKAGDKPHMQTYKVDLNKCGPMVLDALIKIKNE 64
Query: 150 --------------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPD 176
+ID N +KVSKIYPLPHMYV+KDLVPD
Sbjct: 65 VDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPD 124
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 125 LSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWN 184
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRTCPKGLNPG+A
Sbjct: 185 GDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKA 244
Query: 296 IAEIKKLLSGLVKK 309
IAEIKK+++ +K
Sbjct: 245 IAEIKKMMATYKEK 258
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 53 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 112
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 113 PHMYVIKDLVPDLSNFYAQYKSIEPYL 139
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 90 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 141
>gi|301777277|ref|XP_002924062.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Ailuropoda melanoleuca]
Length = 277
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 179/270 (66%), Gaps = 58/270 (21%)
Query: 90 WKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
W +G + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 12 WFPVGGACLQACRGVQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDLN 63
Query: 150 ------------------------------------------------NKIDAN-DKVSK 160
+ID N +KVSK
Sbjct: 64 KCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSK 123
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYEC 219
IYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYEC
Sbjct: 124 IYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYEC 183
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTI
Sbjct: 184 ILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTI 243
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
MNCTRTCPKGLNPG+AIAEIKK+++ K
Sbjct: 244 MNCTRTCPKGLNPGKAIAEIKKMMATYTGK 273
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 68 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 127
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 128 PHMYVIKDLVPDLSNFYAQYKSIEPYL 154
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 105 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 156
>gi|157279735|ref|NP_001098423.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Sus scrofa]
gi|122131481|sp|Q007T0.1|DHSB_PIG RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|115522027|gb|ABJ09403.1| succinate dehydrogenase complex subunit B [Sus scrofa]
Length = 280
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/271 (54%), Positives = 180/271 (66%), Gaps = 58/271 (21%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 14 PATTLGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDL 65
Query: 149 NN------------------------------------------------KIDAN-DKVS 159
NN +ID N DKVS
Sbjct: 66 NNCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVS 125
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYE
Sbjct: 126 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYE 185
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 186 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 245
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
IMNCT TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 246 IMNCTGTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|147899706|ref|NP_001080247.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Xenopus laevis]
gi|123916423|sp|Q3B8J8.1|DHSB_XENLA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|77748119|gb|AAI06301.1| Sdhb-prov protein [Xenopus laevis]
Length = 282
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/234 (60%), Positives = 167/234 (71%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K FAIYRW+PDKP +KP MQ Y+VDLN
Sbjct: 40 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGI 99
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ DK G QYLQS++DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 160 KKKDKSQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRD+ T +RL++L+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 273
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 114/175 (65%), Gaps = 25/175 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKN----IRSFQLSA 108
PHMYVVKDLVPD++NFYAQYKSI+ +L G + L ++ ++ + L A
Sbjct: 133 PHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDKSQQGKEQYLQSIEDRDKLDGLYECILCA 192
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKID-ANDKVSKI 161
S++ P+ Y WN DK MQ Y+ ++++ D +++SK+
Sbjct: 193 CCSTSCPS-----------YWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLSKL 236
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 68/136 (50%), Gaps = 25/136 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ +K G MQ Y +++ D L ++K DP +R +C
Sbjct: 47 YRWDPDK-PGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAM 105
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDM 347
+N G +A +ID N KVSKIYPLPHMYVVKDLVPD+
Sbjct: 106 NINGGNTLA--------------------CTVRIDTNLSKVSKIYPLPHMYVVKDLVPDL 145
Query: 348 NNFYAQYKSIQPWLPR 363
+NFYAQYKSI+P+L +
Sbjct: 146 SNFYAQYKSIEPYLKK 161
>gi|402853129|ref|XP_003891253.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Papio anubis]
Length = 280
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 178/263 (67%), Gaps = 50/263 (19%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
+ G L A L A+ + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 9 LRGRLPATTFGGACLQASRGAQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKC 68
Query: 150 ------------NKIDAN-----------------------------------DKVSKIY 162
N+ID+ +KVSKIY
Sbjct: 69 GPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIY 128
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECIL
Sbjct: 129 PLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECIL 188
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMN
Sbjct: 189 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMN 248
Query: 282 CTRTCPKGLNPGRAIAEIKKLLS 304
CTRTCPKGLNPG+AIAEIKK+++
Sbjct: 249 CTRTCPKGLNPGKAIAEIKKMMA 271
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|47222756|emb|CAG01723.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 180/268 (67%), Gaps = 56/268 (20%)
Query: 98 AKNIRSFQLSAA------ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
++N+ +F+ S A A +A + K F +YRW+PD P +KP MQ Y++DLN
Sbjct: 9 SRNVLAFRNSGALVMVRYAQTAAALAPEPRIKKFQVYRWDPDTPGDKPRMQTYEIDLNAC 68
Query: 150 ----------------------------------------------NKIDAN-DKVSKIY 162
NKID N +K +KIY
Sbjct: 69 GPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDPNTNKTTKIY 128
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ G QY QS++DR+KLDGLYECIL
Sbjct: 129 PLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDETREGKKQYFQSVEDRQKLDGLYECIL 188
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL +L+DPFS+YRCHTIMN
Sbjct: 189 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMN 248
Query: 282 CTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
CT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 249 CTKTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC++KID N +K +KIYPL
Sbjct: 71 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDPNTNKTTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 131 PHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N +K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 108 GNTLACLNKIDPNTNKTTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 159
>gi|395821151|ref|XP_003783911.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Otolemur garnettii]
Length = 280
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 180/273 (65%), Gaps = 58/273 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
++ L P LG + R Q + A + + K FAIYRW+PDK +KP
Sbjct: 6 ALSFRLRFPATTLGGSCLQACRGVQTATATAPRI--------KKFAIYRWDPDKAGDKPR 57
Query: 141 MQEYKVDLN--------------NKIDAN------------------------------- 155
MQ Y++DLN N+ID+
Sbjct: 58 MQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 156 ----DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
+KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR
Sbjct: 118 DTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDR 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK++
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMM 270
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|432098059|gb|ELK27946.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Myotis davidii]
Length = 285
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 178/268 (66%), Gaps = 52/268 (19%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
+ G L + Q A +A A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 16 VTGILNNNSKDDHQACRGAQTA--AATAPRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKC 73
Query: 150 ----------------------------------------------NKIDAN-DKVSKIY 162
+ID N +KVSKIY
Sbjct: 74 GPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIY 133
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR KLDGLYECIL
Sbjct: 134 PLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDRDKLDGLYECIL 193
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMN
Sbjct: 194 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMN 253
Query: 282 CTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
CTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 254 CTRTCPKGLNPGKAIAEIKKMMATYKEK 281
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 76 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 135
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 136 PHMYVIKDLVPDLSNFYAQYKSIEPYL 162
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 113 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 164
>gi|432864334|ref|XP_004070270.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like isoform 2 [Oryzias latipes]
Length = 307
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/259 (56%), Positives = 179/259 (69%), Gaps = 56/259 (21%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+RS Q AAA A +P + K F +YRW+PD+P +KP MQ Y+VDLN
Sbjct: 49 VRSTQTVAAA-----APEP-RMKAFQVYRWDPDRPGDKPRMQTYEVDLNTCGPMVLDALI 102
Query: 150 -------------------------------------NKIDAND-KVSKIYPLPHMYVVK 171
N+I+AN K +KIYPLPHMYVVK
Sbjct: 103 KIKNEMDPTLTFRRSCREGICGSCAMNINGENTLACLNRINANSSKATKIYPLPHMYVVK 162
Query: 172 DLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
DLVPDM+NFYAQYKSI+P+L++ D G QY QS++DR+KLDGLYECILCACCSTSCP
Sbjct: 163 DLVPDMSNFYAQYKSIEPYLKKKDGSQEGKTQYFQSVEDRQKLDGLYECILCACCSTSCP 222
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGL
Sbjct: 223 SYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGL 282
Query: 291 NPGRAIAEIKKLLSGLVKK 309
NPG+AIAEIKK+++ +K
Sbjct: 283 NPGKAIAEIKKMMATYREK 301
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+++I+AN K +KIYPL
Sbjct: 96 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGENTLACLNRINANSSKATKIYPL 155
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 156 PHMYVVKDLVPDMSNFYAQYKSIEPYL 182
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L++I+AN K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 137 ACLNRINANSSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 182
>gi|441678029|ref|XP_004093293.1| PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase
[ubiquinone] iron-sulfur subunit, mitochondrial
[Nomascus leucogenys]
Length = 280
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 178/264 (67%), Gaps = 50/264 (18%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
L A + L A+ + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 13 LPATTLSGACLQASRGAQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMV 72
Query: 150 ------------------------------------------NKIDAN-DKVSKIYPLPH 166
KID N +KVSKIYPLPH
Sbjct: 73 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRKIDTNLNKVSKIYPLPH 132
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
MYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACC
Sbjct: 133 MYVIKDLVPDLSNFYAQYKSIEPYLKKXDESQEGKQQYLQSIEEREKLDGLYECILCACC 192
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRT
Sbjct: 193 STSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRT 252
Query: 286 CPKGLNPGRAIAEIKKLLSGLVKK 309
CPKGLNPG+AIAEIKK+++ +K
Sbjct: 253 CPKGLNPGKAIAEIKKMMATYKEK 276
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRKIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRKIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|387763182|ref|NP_001248733.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Macaca mulatta]
gi|90086177|dbj|BAE91641.1| unnamed protein product [Macaca fascicularis]
gi|355744952|gb|EHH49577.1| hypothetical protein EGM_00264 [Macaca fascicularis]
gi|380788559|gb|AFE66155.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Macaca mulatta]
gi|383409355|gb|AFH27891.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Macaca mulatta]
gi|384943852|gb|AFI35531.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Macaca mulatta]
Length = 280
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 179/263 (68%), Gaps = 50/263 (19%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
+ G L A + L A+ + A + K FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 9 LRGRLPATALGGACLQASRGAQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEIDLNKC 68
Query: 150 ------------NKIDAN-----------------------------------DKVSKIY 162
N+ID+ +KVSKIY
Sbjct: 69 GPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIY 128
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECIL
Sbjct: 129 PLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECIL 188
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMN
Sbjct: 189 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMN 248
Query: 282 CTRTCPKGLNPGRAIAEIKKLLS 304
CTRTCPKGLNPG+AIAEIKK+++
Sbjct: 249 CTRTCPKGLNPGKAIAEIKKMMA 271
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|417398306|gb|JAA46186.1| Putative succinate dehydrogenase fe-s protein subunit [Desmodus
rotundus]
Length = 280
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 180/266 (67%), Gaps = 58/266 (21%)
Query: 102 RSFQLSAAASSAVPAEKPA--------KYKTFAIYRWNPDKPDEKPTMQEYKVDLN---- 149
R F +A S + A + A + K FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 11 RRFPATALGGSCLQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPRMQTYEIDLNKCGP 70
Query: 150 ----------NKIDAN-----------------------------------DKVSKIYPL 164
N+ID+ +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 165 PHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCA 223
PHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCA
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 190
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT
Sbjct: 191 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCT 250
Query: 284 RTCPKGLNPGRAIAEIKKLLSGLVKK 309
RTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 251 RTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|27882636|gb|AAH43859.1| Sdhb-prov protein [Xenopus laevis]
Length = 282
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 167/234 (71%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K FAIYRW+PDKP +KP MQ Y+VDLN
Sbjct: 40 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGI 99
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 160 KKKDESQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRD+ T +RL++L+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 273
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 114/175 (65%), Gaps = 25/175 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKN----IRSFQLSA 108
PHMYVVKDLVPD++NFYAQYKSI+ +L G + L ++ ++ + L A
Sbjct: 133 PHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESQQGKEQYLQSIEDRDKLDGLYECILCA 192
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKID-ANDKVSKI 161
S++ P+ Y WN DK MQ Y+ ++++ D +++SK+
Sbjct: 193 CCSTSCPS-----------YWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLSKL 236
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 25/136 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ +K G MQ Y +++ D L ++K DP +R R+C +
Sbjct: 47 YRWDPDK-PGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFR--------RSCRE 97
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ ++G G A +ID N KVSKIYPLPHMYVVKDLVPD+
Sbjct: 98 GICGSCAMN-----ING-------GNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDL 145
Query: 348 NNFYAQYKSIQPWLPR 363
+NFYAQYKSI+P+L +
Sbjct: 146 SNFYAQYKSIEPYLKK 161
>gi|355557595|gb|EHH14375.1| hypothetical protein EGK_00292 [Macaca mulatta]
Length = 280
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 179/263 (68%), Gaps = 50/263 (19%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
+ G L A + L A+ + A + K FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 9 LRGRLPATALGGACLQASRGAQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEIDLNKC 68
Query: 150 ------------NKIDAN-----------------------------------DKVSKIY 162
N+ID+ +KVSKIY
Sbjct: 69 GPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIY 128
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECIL
Sbjct: 129 PLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECIL 188
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMN
Sbjct: 189 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMN 248
Query: 282 CTRTCPKGLNPGRAIAEIKKLLS 304
CTRTCPKGLNPG+AIAE+KK+++
Sbjct: 249 CTRTCPKGLNPGKAIAEVKKMMA 271
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|255308906|ref|NP_001157295.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Equus caballus]
Length = 280
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 182/274 (66%), Gaps = 60/274 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R P LG + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRF--PATALGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPH 57
Query: 141 MQEYKVDLN--------------NKIDAN------------------------------- 155
MQ Y++DLN N+ID+
Sbjct: 58 MQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 156 ----DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R
Sbjct: 118 DTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEER 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
FS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 238 FSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMA 271
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 109/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCA 190
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 191 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 229
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|296206845|ref|XP_002750378.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial [Callithrix jacchus]
Length = 280
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/257 (56%), Positives = 175/257 (68%), Gaps = 50/257 (19%)
Query: 98 AKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------- 149
A + L A + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 15 ATTVGGACLQACRGAQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLD 74
Query: 150 ------NKIDAN-----------------------------------DKVSKIYPLPHMY 168
N+ID+ +KVSKIYPLPHMY
Sbjct: 75 ALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMY 134
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
V+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCST
Sbjct: 135 VIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCST 194
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRTCP
Sbjct: 195 SCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCP 254
Query: 288 KGLNPGRAIAEIKKLLS 304
KGLNPG+AIAEIKK+++
Sbjct: 255 KGLNPGKAIAEIKKMMA 271
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCA 190
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 191 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 229
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|148681388|gb|EDL13335.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_e [Mus musculus]
Length = 280
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 182/268 (67%), Gaps = 58/268 (21%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P +LG + + R Q +AAA+ + K FAIYRW+PDK +KP MQ Y+V
Sbjct: 12 GFPAAVLGRVGLQACRGAQTAAAAAPRI--------KKFAIYRWDPDKTGDKPRMQTYEV 63
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 64 DLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSK 123
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
VSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 124 VSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGL 183
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFSVYRC
Sbjct: 184 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRC 243
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 244 HTIMNCTQTCPKGLNPGKAIAEIKKMMA 271
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 71 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|148922926|ref|NP_001092210.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Danio rerio]
gi|206558175|sp|A5PL98.1|DHSB_DANRE RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|148745148|gb|AAI42800.1| Sdhb protein [Danio rerio]
Length = 280
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 168/240 (70%), Gaps = 50/240 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F IYRW+PD +KP MQ Y++DLN
Sbjct: 37 RIKKFQIYRWDPDTVGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMDSTLTFRRSCREGI 96
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 97 CGSCAMNINGGNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 156
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 157 KKKDESQQGKQQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 216
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
W+IDSRD+ T DRL++L+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK++ +KD
Sbjct: 217 WMIDSRDDFTEDRLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMVTYKQKD 276
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 114/175 (65%), Gaps = 25/175 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N KV+KIYPL
Sbjct: 70 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVTKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYVVKDLVPDM+NFYAQYKSI+ +L G + L ++ + + L A
Sbjct: 130 PHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDESQQGKQQYLQSVEDRQKLDGLYECILCA 189
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKID-ANDKVSKI 161
S++ P+ Y WN DK MQ Y+ ++++ D D++SK+
Sbjct: 190 CCSTSCPS-----------YWWNADKYLGPAVLMQAYRWMIDSRDDFTEDRLSKL 233
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 107 GNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 158
>gi|94966775|ref|NP_001035573.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Bos taurus]
gi|110808206|sp|Q3T189.1|DHSB_BOVIN RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=IP; Flags: Precursor
gi|74267982|gb|AAI02068.1| Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Bos
taurus]
gi|296489952|tpg|DAA32065.1| TPA: succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Bos taurus]
Length = 280
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 177/262 (67%), Gaps = 50/262 (19%)
Query: 98 AKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------- 150
A + +L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 15 AAALGGARLQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLD 74
Query: 151 -----------------------------------------KIDAN-DKVSKIYPLPHMY 168
+ID N KVSKIYPLPHMY
Sbjct: 75 ALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMY 134
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
V+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCST
Sbjct: 135 VIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIEDREKLDGLYECILCACCST 194
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCP
Sbjct: 195 SCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCP 254
Query: 288 KGLNPGRAIAEIKKLLSGLVKK 309
KGLNPG+AIAEIKK+++ +K
Sbjct: 255 KGLNPGKAIAEIKKMMATYKEK 276
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 109/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIEDREKLDGLYECILCA 190
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 191 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 229
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|225707986|gb|ACO09839.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Osmerus mordax]
Length = 281
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/260 (55%), Positives = 178/260 (68%), Gaps = 53/260 (20%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------- 150
+L+ A+++VP + K F IYRW+PD +KP MQ Y++DLNN
Sbjct: 25 RLAQTAAASVPQ---PRIKKFQIYRWDPDTTGDKPRMQTYEIDLNNCGPMVLDALIKIKN 81
Query: 151 ----------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVP 175
KID+N K +KIYPLPHMYVVKDLVP
Sbjct: 82 EMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDSNTSKATKIYPLPHMYVVKDLVP 141
Query: 176 DMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
DM+NFYAQYKSI+P+L++ D+ G QY Q+++DR+KLDGLYECILCACCSTSCPSYWW
Sbjct: 142 DMSNFYAQYKSIEPYLKKKDESQEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWW 201
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
NG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+
Sbjct: 202 NGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGK 261
Query: 295 AIAEIKKLLSGLVKKDKPGL 314
AIAEIKK+++ +K L
Sbjct: 262 AIAEIKKMMATYKEKKSATL 281
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC++KID+N K +KIYPL
Sbjct: 71 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDSNTSKATKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 131 PHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID+N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 108 GNTLACLNKIDSNTSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 159
>gi|74146895|dbj|BAE41403.1| unnamed protein product [Mus musculus]
Length = 282
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 177/268 (66%), Gaps = 56/268 (20%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P +LG + Q A + A + K FAIYRW+PDK +K MQ Y+V
Sbjct: 12 GFPAAVLGRV------GLQFQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKTRMQTYEV 65
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 66 DLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSK 125
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
VSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 126 VSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGL 185
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFSVYRC
Sbjct: 186 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRC 245
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 246 HTIMNCTQTCPKGLNPGKAIAEIKKMMA 273
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y W+ +K G MQ Y ++ D L ++K+ + + R+C +G+
Sbjct: 47 YRWDPDK-TGDKTRMQTYEVDLNKCGPMVLDALIKIKNEVD-----STLTFRRSCREGIC 100
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNF 350
A+ ++G G A +ID + KVSKIYPLPHMYV+KDLVPD++NF
Sbjct: 101 GSCAMN-----ING-------GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNF 148
Query: 351 YAQYKSIQPWLPR 363
YAQYKSI+P+L +
Sbjct: 149 YAQYKSIEPYLKK 161
>gi|229366970|gb|ACQ58465.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Anoplopoma fimbria]
Length = 281
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 183/275 (66%), Gaps = 58/275 (21%)
Query: 92 ILGTLTAKNIRSFQLSA-------AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEY 144
++G +N+ + + S A ++A PA + ++ K F IYRW+PD +KP MQ Y
Sbjct: 3 VVGGALCRNVLAVRNSGMMVMVRHAQTAAAPAPE-SRIKKFQIYRWDPDTSGDKPRMQTY 61
Query: 145 KVDLN------------------------------------------------NKIDAN- 155
++DLN NKID N
Sbjct: 62 EIDLNTCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNT 121
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLD 214
K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D G QY QS++DR+KLD
Sbjct: 122 SKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDGAQEGKEQYFQSVEDRQKLD 181
Query: 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
GLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+Y
Sbjct: 182 GLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLY 241
Query: 275 RCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
RCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 242 RCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 71 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 131 PHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 108 GNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 159
>gi|431906273|gb|ELK10470.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Pteropus alecto]
Length = 280
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/254 (55%), Positives = 175/254 (68%), Gaps = 50/254 (19%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NK 151
L A + A + K FAIYRW+PDK +KP MQ Y++DLN N+
Sbjct: 23 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNE 82
Query: 152 IDAN-----------------------------------DKVSKIYPLPHMYVVKDLVPD 176
ID+ +KVSKIYPLPHMYV+KDLVPD
Sbjct: 83 IDSTLTFRRSCREGICGSCAMNINGGNTLACTKRIDTNLNKVSKIYPLPHMYVIKDLVPD 142
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 143 LSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWN 202
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLNPG+A
Sbjct: 203 GDKYLGPAVLMQAYRWLIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKA 262
Query: 296 IAEIKKLLSGLVKK 309
IAEIKK+++ +K
Sbjct: 263 IAEIKKMMATYKEK 276
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTKRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTKRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|410899056|ref|XP_003963013.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Takifugu rubripes]
Length = 278
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/268 (54%), Positives = 181/268 (67%), Gaps = 58/268 (21%)
Query: 99 KNIRSFQLSA-------AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-- 149
+N+ +F+ S A ++A A +P + K F IYRW+PD +KP MQ Y++DLN
Sbjct: 7 RNLLAFRNSGVLVMMRYAQTAAALAPEP-RLKKFQIYRWDPDTAGDKPRMQTYEIDLNAC 65
Query: 150 ----------------------------------------------NKIDAN-DKVSKIY 162
NKID N +K +KIY
Sbjct: 66 GPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTNKTTKIY 125
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ G QY QS++DR+KLDGLYECIL
Sbjct: 126 PLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDETQEGKEQYFQSVEDRQKLDGLYECIL 185
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL +L+DPFS+YRCHTIMN
Sbjct: 186 CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMN 245
Query: 282 CTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
CT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 246 CTKTCPKGLNPGKAIAEIKKMMATYKEK 273
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC++KID N +K +KIYPL
Sbjct: 68 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTNKTTKIYPL 127
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 128 PHMYVVKDLVPDMSNFYAQYKSIEPYL 154
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N +K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 105 GNTLACLNKIDTNTNKTTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 156
>gi|187608308|ref|NP_001120000.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial precursor [Xenopus (Silurana) tropicalis]
gi|205831551|sp|B0BM36.1|DHSB_XENTR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|165971096|gb|AAI58271.1| sdhb protein [Xenopus (Silurana) tropicalis]
Length = 284
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 166/234 (70%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K FAIYRW+PDKP +KP MQ Y+VDLN
Sbjct: 42 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCREGI 101
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L
Sbjct: 102 CGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 161
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 162 KKKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 221
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 222 WMIDSRDDYTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 275
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 75 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 134
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 135 PHMYVVKDLVPDLSNFYAQYKSIEPYL 161
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 73/136 (53%), Gaps = 25/136 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ +K G MQ Y ++ D L ++K DP +R R+C +
Sbjct: 49 YRWDPDK-PGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFR--------RSCRE 99
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ ++G G A +ID N KVSKIYPLPHMYVVKDLVPD+
Sbjct: 100 GICGSCAMN-----ING-------GNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDL 147
Query: 348 NNFYAQYKSIQPWLPR 363
+NFYAQYKSI+P+L +
Sbjct: 148 SNFYAQYKSIEPYLKK 163
>gi|322812259|pdb|3ABV|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide
gi|322812267|pdb|3AE1|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Phenyl-2-(Trifluoromethyl)-Benzamide
gi|322812271|pdb|3AE2|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Hydroxy-N-Phenyl-Benzamide
gi|322812275|pdb|3AE3|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Nitro-N-Phenyl-Benzamide
gi|322812279|pdb|3AE4|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Methyl-Benzamide
gi|322812283|pdb|3AE5|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Methyl-N-(3-Isopropoxy-Phenyl)-Benzamide
gi|322812287|pdb|3AE6|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-(3-Isopropoxy-Phenyl)-Phthalamicacid
gi|322812291|pdb|3AE7|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(3-Isopropoxy-Phenyl)-Benzamide
gi|322812295|pdb|3AE8|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Isopropoxy-Phenyl)-2-Trifluoromethylbenzamide
gi|322812299|pdb|3AE9|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Pentafluorophenyloxy-Phenyl)-2-Trifluoromethyl-
Benzamide
gi|322812303|pdb|3AEA|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Dimethylaminomethyl-Phenyl)-2-Trifluoromethyl-
Benzamide
gi|322812307|pdb|3AEB|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Phenoxy-Phenyl)-2-Trifluoromethyl-Benzamide
gi|322812311|pdb|3AEC|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(1-Methylethyl)-Benzamid
gi|322812315|pdb|3AED|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Phenyl-Benzamide
gi|322812319|pdb|3AEE|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With Atpenin A5
gi|322812323|pdb|3AEF|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii With An Empty Quinone-Binding Pocket
gi|322812327|pdb|3AEG|B Chain B, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Biphenyl-3-Yl-2-Iodo-Benzamide
Length = 252
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 172/248 (69%), Gaps = 50/248 (20%)
Query: 112 SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------- 150
+ A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 1 AQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLT 60
Query: 151 ---------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYA 182
+ID N DKVSKIYPLPHMYV+KDLVPD++NFYA
Sbjct: 61 FRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYA 120
Query: 183 QYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLG 241
QYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACCSTSCPSYWWNG+KYLG
Sbjct: 121 QYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLG 180
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT TCPKGLNPG+AIAEIKK
Sbjct: 181 PAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKK 240
Query: 302 LLSGLVKK 309
+++ +K
Sbjct: 241 MMATYKEK 248
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 43 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 102
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 103 PHMYVIKDLVPDLSNFYAQYKSIEPYL 129
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 80 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 131
>gi|328783910|ref|XP_623566.2| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Apis mellifera]
Length = 249
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 164/240 (68%), Gaps = 55/240 (22%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
+ +R F +SA +++ AK K+FA+YRWNPDKPDEKP MQEYKVDLN
Sbjct: 14 RQVRGFHISANQNAS-----EAKLKSFAVYRWNPDKPDEKPYMQEYKVDLNTCGPMVLDA 68
Query: 150 ---------------------------------------NKIDAN-DKVSKIYPLPHMYV 169
+KID N + SKIYPLPHMY+
Sbjct: 69 LIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNLNSTSKIYPLPHMYI 128
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPD+NNFY QYKSIQPWLQR D + G QYLQS++DRKKLDGLYECILCACCSTS
Sbjct: 129 VKDLVPDLNNFYNQYKSIQPWLQRGDAKETGAKQYLQSVEDRKKLDGLYECILCACCSTS 188
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWNG+KYLGPAVLMQAYRWIIDSRD K +RL +L+DP+SVYRCHTIMNCTRTCPK
Sbjct: 189 CPSYWWNGDKYLGPAVLMQAYRWIIDSRDSKAKERLAKLRDPYSVYRCHTIMNCTRTCPK 248
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 80/91 (87%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACISKID N + SKIYPL
Sbjct: 64 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDTNLNSTSKIYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QYKSIQ PW
Sbjct: 124 PHMYIVKDLVPDLNNFYNQYKSIQ-----PW 149
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 27/138 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ Y+ +++ D L ++K DP +R R+C +
Sbjct: 38 YRWNPDK-PDEKPYMQEYKVDLNTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 88
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N + SKIYPLPHMY+VKDLVPD
Sbjct: 89 GI-------------CGSCAMNIGGTNTLACISKIDTNLNSTSKIYPLPHMYIVKDLVPD 135
Query: 347 MNNFYAQYKSIQPWLPRS 364
+NNFY QYKSIQPWL R
Sbjct: 136 LNNFYNQYKSIQPWLQRG 153
>gi|73535957|pdb|1ZOY|B Chain B, Crystal Structure Of Mitochondrial Respiratory Complex Ii
From Porcine Heart At 2.4 Angstroms
gi|73535961|pdb|1ZP0|B Chain B, Crystal Structure Of Mitochondrial Respiratory Complex Ii
Bound With 3-Nitropropionate And
2-Thenoyltrifluoroacetone
gi|345531793|pdb|3SFD|B Chain B, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Pentachlorophenol
gi|345531797|pdb|3SFE|B Chain B, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Thiabendazole
Length = 252
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 172/248 (69%), Gaps = 50/248 (20%)
Query: 112 SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------- 150
+ A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 1 AQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLT 60
Query: 151 ---------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYA 182
+ID N DKVSKIYPLPHMYV+KDLVPD++NFYA
Sbjct: 61 FRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYA 120
Query: 183 QYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLG 241
QYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACCSTSCPSYWWNG+KYLG
Sbjct: 121 QYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLG 180
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT TCPKGLNPG+AIAEIKK
Sbjct: 181 PAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKK 240
Query: 302 LLSGLVKK 309
+++ +K
Sbjct: 241 MMATYKEK 248
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 43 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 102
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 103 PHMYVIKDLVPDLSNFYAQYKSIEPYL 129
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 19/133 (14%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y W+ +K G MQ Y +++ D L ++K+ + + R+C +G+
Sbjct: 17 YRWDPDK-TGDKPHMQTYEIDLNNCGPMVLDALIKIKNEID-----STLTFRRSCREGIC 70
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNF 350
A+ ++G G A +ID N DKVSKIYPLPHMYV+KDLVPD++NF
Sbjct: 71 GSCAMN-----ING-------GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNF 118
Query: 351 YAQYKSIQPWLPR 363
YAQYKSI+P+L +
Sbjct: 119 YAQYKSIEPYLKK 131
>gi|410919605|ref|XP_003973274.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Takifugu rubripes]
Length = 283
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/239 (58%), Positives = 168/239 (70%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD P +KP MQ Y +DLN
Sbjct: 40 RIKKFQVYRWDPDTPGDKPRMQTYDIDLNTCGPMVLDALIKIKNEIDSTLTFRRSCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ N G QYLQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDEANEGKEQYLQSVQDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYKEK 278
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 73 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|291415330|ref|XP_002723906.1| PREDICTED: succinate dehydrogenase complex, subunit B, iron sulfur
(Ip) [Oryctolagus cuniculus]
Length = 280
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 183/279 (65%), Gaps = 60/279 (21%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R P LG + + R Q +AA + + K FAIYRW+PDK +KP
Sbjct: 8 SLRRRF--PATALGGVCLQACREAQTAAATAPRI--------KKFAIYRWDPDKAGDKPR 57
Query: 141 MQEYKVDLN--------------NKIDAN------------------------------- 155
MQ Y+VDLN N+ID+
Sbjct: 58 MQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRI 117
Query: 156 ----DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDR 210
DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R
Sbjct: 118 DTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEER 177
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
+KLDGLYECI CACCSTSCPSYW NG+KYLGP VLMQAYRW+IDSRD+ T +RL +L+DP
Sbjct: 178 EKLDGLYECIFCACCSTSCPSYWXNGDKYLGPPVLMQAYRWMIDSRDDFTEERLAKLQDP 237
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
FS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 238 FSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
>gi|440897100|gb|ELR48868.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial, partial [Bos grunniens mutus]
Length = 259
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/239 (58%), Positives = 170/239 (71%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 17 RIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGI 76
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L
Sbjct: 77 CGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYL 136
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 137 KKKDESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 196
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 197 WMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 255
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 98/146 (67%), Gaps = 23/146 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 50 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 109
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 110 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIEDREKLDGLYECILCA 169
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK 134
S++ P+ Y WN DK
Sbjct: 170 CCSTSCPS-----------YWWNGDK 184
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 87 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 138
>gi|225703158|gb|ACO07425.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Oncorhynchus mykiss]
gi|225704544|gb|ACO08118.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Oncorhynchus mykiss]
Length = 289
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/251 (56%), Positives = 174/251 (69%), Gaps = 51/251 (20%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------ 150
A ++A PA +P + K F IYRW+PD +KP MQ Y++DLNN
Sbjct: 27 AQTAAAPASEP-RIKKFQIYRWDPDTMGDKPRMQTYEIDLNNCGPMVLDALIKIKNEMDP 85
Query: 151 ------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNN 179
KID N K KIYPLPHMYVVKDLVPDM+N
Sbjct: 86 TLTFRRSCREGICGSCAMNINGGNTLACLNKIDINTSKPIKIYPLPHMYVVKDLVPDMSN 145
Query: 180 FYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FYAQYKSI+P+L++ D+ G QY Q+++DR+KLDGLYECILCACCSTSCPSYWWNG+K
Sbjct: 146 FYAQYKSIEPFLKKKDESQEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDK 205
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAE
Sbjct: 206 YLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAE 265
Query: 299 IKKLLSGLVKK 309
IKK+++ +K
Sbjct: 266 IKKMMATYKEK 276
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC++KID N K KIYPL
Sbjct: 71 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDINTSKPIKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ L
Sbjct: 131 PHMYVVKDLVPDMSNFYAQYKSIEPFL 157
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 25/136 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ + +G MQ Y +++ D L ++K DP +R R+C +
Sbjct: 45 YRWDPDT-MGDKPRMQTYEIDLNNCGPMVLDALIKIKNEMDPTLTFR--------RSCRE 95
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ ++G G A L+KID N K KIYPLPHMYVVKDLVPDM
Sbjct: 96 GICGSCAMN-----ING-------GNTLACLNKIDINTSKPIKIYPLPHMYVVKDLVPDM 143
Query: 348 NNFYAQYKSIQPWLPR 363
+NFYAQYKSI+P+L +
Sbjct: 144 SNFYAQYKSIEPFLKK 159
>gi|229367324|gb|ACQ58642.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Anoplopoma fimbria]
Length = 283
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 140/239 (58%), Positives = 167/239 (69%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD P +KP MQ Y +DLN
Sbjct: 40 RIKKFQVYRWDPDTPGDKPRMQTYDIDLNTCGPMVLDALIKIKNEMDSTLTFRRFCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K SKIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTPACLNKIDTNISKPSKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D G QYLQ+++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDGTKEGKEQYLQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYKEK 278
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 101/155 (65%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRR CREGICGSCAMNI G NT AC++KID N K SKIYPL
Sbjct: 73 MVLDALIKIKNEMDSTLTFRRFCREGICGSCAMNINGGNTPACLNKIDTNISKPSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-------GPWKILGTLTAK----NIRSFQLSA 108
PHMYVVKDLVPDM+NFYAQYKSI+ +L G + L T+ + + L A
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDGTKEGKEQYLQTVEDRQKLDGLYECILCA 192
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY A+ YRW D DE
Sbjct: 193 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDE 227
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K SKIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTPACLNKIDTNISKPSKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|67083789|gb|AAY66829.1| succinate dehydrogenase Ip subunit [Ixodes scapularis]
Length = 282
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 163/245 (66%), Gaps = 49/245 (20%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F IYRWNP+K +KP +Q Y+VDLN
Sbjct: 38 KKFEIYRWNPEKKGDKPRLQTYEVDLNACGPMVLDALIKIKNEVDPTLTFRRSCREGICG 97
Query: 151 ----------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
KID + +KIYPLPHMYVVKDLVPDM FY QYKSIQPWLQ+
Sbjct: 98 SCAMNIDGRNTLACICKIDNPGQSTKIYPLPHMYVVKDLVPDMTLFYEQYKSIQPWLQKK 157
Query: 195 KE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
E +G Q+LQS++DRKKLDGLYECILCACCSTSCPSYWWN ++YLGPA LMQ YRW+I
Sbjct: 158 TEVKLGEQQHLQSIEDRKKLDGLYECILCACCSTSCPSYWWNSDRYLGPAALMQVYRWVI 217
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPG 313
DSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPK LNPGRAI E+KKL+SG+ +K KP
Sbjct: 218 DSRDDNTQERLKRLEDPFSMYRCHTIMNCTKTCPKSLNPGRAIGELKKLVSGISQKPKPD 277
Query: 314 LDTAA 318
L A
Sbjct: 278 LSGVA 282
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 75/90 (83%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI KID + +KIYPLP
Sbjct: 69 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGRNTLACICKIDNPGQSTKIYPLP 128
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYVVKDLVPDM FY QYKSIQ PW
Sbjct: 129 HMYVVKDLVPDMTLFYEQYKSIQ-----PW 153
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN EK G +Q Y +++ D L ++K DP +R R+C +
Sbjct: 43 YRWNPEKK-GDKPRLQTYEVDLNACGPMVLDALIKIKNEVDPTLTFR--------RSCRE 93
Query: 289 GLNPGRAI-AEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ + + L+ + K D PG T KIYPLPHMYVVKDLVPDM
Sbjct: 94 GICGSCAMNIDGRNTLACICKIDNPGQST-------------KIYPLPHMYVVKDLVPDM 140
Query: 348 NNFYAQYKSIQPWLPR 363
FY QYKSIQPWL +
Sbjct: 141 TLFYEQYKSIQPWLQK 156
>gi|47229654|emb|CAG06850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 282
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/239 (58%), Positives = 168/239 (70%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD P +KP MQ Y +DLN
Sbjct: 40 RIKKFQVYRWDPDTPGDKPRMQTYDIDLNTCGPMVLDALIKIKNEIDSTLTFRRSCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ + G QYLQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDEADEGKEQYLQSVQDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 220 WMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYKEK 278
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 73 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|209733066|gb|ACI67402.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Salmo salar]
Length = 283
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 166/234 (70%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD +KP MQ +++DLN
Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFEIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ N G QY Q+++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDETNGGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMA 273
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 103/155 (66%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 73 MVLDALIKIKNEMDGTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTGKATKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYVVKDLVPDM+NFYAQYKSI+ +L GG + T+ + + L A
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDETNGGKEQYHQTVEDRQKLDGLYECILCA 192
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY A+ YRW D DE
Sbjct: 193 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDE 227
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|213515560|ref|NP_001135166.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Salmo salar]
gi|197632253|gb|ACH70850.1| succinate dehydrogenase complex, subunit B iron sulfur [Salmo
salar]
gi|223646776|gb|ACN10146.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Salmo salar]
gi|223672631|gb|ACN12497.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Salmo salar]
Length = 283
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 166/234 (70%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD +KP MQ +++DLN
Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFEIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ N G QY Q+++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDETNEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMA 273
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 73 MVLDALIKIKNEMDGTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTGKATKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|354502631|ref|XP_003513387.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Cricetulus griseus]
Length = 272
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/239 (58%), Positives = 170/239 (71%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ K FAIYRW+PDK +KP MQ Y+VDLN N+ID+
Sbjct: 30 RIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGI 89
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KVSKIYPLPHMYV+KDLVPD++NFYAQY+SI+P+L
Sbjct: 90 CGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYRSIEPYL 149
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 150 KKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 209
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 210 WMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 268
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 63 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQY+SI+ +L
Sbjct: 123 PHMYVIKDLVPDLSNFYAQYRSIEPYL 149
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQY+SI+P+L +
Sbjct: 100 GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYRSIEPYLKK 151
>gi|241896862|ref|NP_001155908.1| succinate dehydrogenase B [Acyrthosiphon pisum]
gi|239799464|dbj|BAH70651.1| ACYPI003519 [Acyrthosiphon pisum]
Length = 290
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 169/270 (62%), Gaps = 51/270 (18%)
Query: 98 AKNIRSFQLSAA--ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
+ I+ +S A AS +K + KT +YRWNP+ P+ KP MQ+YKVDLN
Sbjct: 20 TQQIKQIHISTALAASDGAVVDKAPRIKTVQVYRWNPETPEVKPKMQDYKVDLNSCGPMV 79
Query: 150 --------NKIDAN-----------------------------------DKVSKIYPLPH 166
N D+ K KIYPLPH
Sbjct: 80 LDVLIKIKNSEDSTLTFRRSCREGICGSCAMNIGGVNTLACISGVNADLSKPLKIYPLPH 139
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
MYVVKDLVPDM FY QY SI+PWL D N ++LQ DR+KLDGLYECILCACCS
Sbjct: 140 MYVVKDLVPDMKLFYKQYASIEPWLHTDVIPANNKEHLQHTYDREKLDGLYECILCACCS 199
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWN EKYLGPAVLMQAYRWIIDSRD+ TA+RL+++KDPFSV+RCHTIMNCT+TC
Sbjct: 200 TSCPSYWWNSEKYLGPAVLMQAYRWIIDSRDKATAERLDKMKDPFSVFRCHTIMNCTKTC 259
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT 316
PKGLNPG AIA IK LLSG K++P + T
Sbjct: 260 PKGLNPGGAIARIKSLLSGTSNKEEPKVIT 289
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 77/106 (72%), Gaps = 6/106 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD LIKIKN D TLTFRRSCREGICGSCAMNIGGVNTLACIS ++A+ K KIYPL
Sbjct: 78 MVLDVLIKIKNSEDSTLTFRRSCREGICGSCAMNIGGVNTLACISGVNADLSKPLKIYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ 105
PHMYVVKDLVPDM FY QY SI+ PW + A N Q
Sbjct: 138 PHMYVVKDLVPDMKLFYKQYASIE-----PWLHTDVIPANNKEHLQ 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 25/134 (18%)
Query: 232 YWWNGEKYLGPAVL--MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
Y WN E P V MQ Y+ ++S D L ++K+ + + R+C +G
Sbjct: 52 YRWNPET---PEVKPKMQDYKVDLNSCGPMVLDVLIKIKNSED-----STLTFRRSCREG 103
Query: 290 LNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDM 347
+ G + G++T A + ++A+ K KIYPLPHMYVVKDLVPDM
Sbjct: 104 I-------------CGSCAMNIGGVNTLACISGVNADLSKPLKIYPLPHMYVVKDLVPDM 150
Query: 348 NNFYAQYKSIQPWL 361
FY QY SI+PWL
Sbjct: 151 KLFYKQYASIEPWL 164
>gi|225704794|gb|ACO08243.1| Succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Oncorhynchus mykiss]
Length = 283
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/239 (57%), Positives = 167/239 (69%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD +KP MQ + +DLN
Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFDIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ N G QY Q+++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDETNEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKMMATYKEK 278
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 73 MVLDALIKIKNEMDGTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKATKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTSKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|209731290|gb|ACI66514.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Salmo salar]
gi|303664490|gb|ADM16144.1| Succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Salmo salar]
Length = 283
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 165/234 (70%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD +KP MQ +++DLN
Sbjct: 40 RIKKFQVYRWDPDTVGDKPRMQTFEIDLNTCGPMVLDALIKIKNEMDGTLTFRRSCREGI 99
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
NKID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 100 CGSCAMNINGGNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ N G QY Q+++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 160 KKKDETNEGKEQYHQTVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 219
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRDE T +RL++L+DPFS+YRCHTI NCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 220 WMIDSRDEFTEERLSKLQDPFSLYRCHTITNCTKTCPKGLNPGKAIAEIKKMMA 273
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 73 MVLDALIKIKNEMDGTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTGKATKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDMSNFYAQYKSIEPYL 159
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 110 GNTLACLNKIDTNTGKATKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 161
>gi|432959017|ref|XP_004086147.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Oryzias latipes]
Length = 285
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 165/234 (70%), Gaps = 50/234 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ K F +YRW+PD P +KP MQ Y +DLN
Sbjct: 42 RIKKFQVYRWDPDTPGDKPRMQTYDIDLNACGPMVLDALIKIKNEMDPTLTFRRSCREGI 101
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 102 CGSCAMNINGGNTLACLQRIDPNLSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 161
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 162 KKKDESREGKEQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 221
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+IDSRDE T +RL++L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++
Sbjct: 222 WMIDSRDEFTDERLSKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMA 275
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N K +KIYPL
Sbjct: 75 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLQRIDPNLSKPTKIYPL 134
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 135 PHMYVVKDLVPDMSNFYAQYKSIEPYL 161
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L +ID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 112 GNTLACLQRIDPNLSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 163
>gi|89573829|gb|ABD77140.1| succinate dehydrogenase complex subunit B [Homo sapiens]
Length = 255
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 169/252 (67%), Gaps = 50/252 (19%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
L A + L A+ + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 4 LPATTLGGACLQASRGAQTAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMV 63
Query: 150 ------------------------------------------NKIDAN-DKVSKIYPLPH 166
+ID N +KVSKIYPLPH
Sbjct: 64 LDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPH 123
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
MYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACC
Sbjct: 124 MYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACC 183
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRT
Sbjct: 184 STSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRT 243
Query: 286 CPKGLNPGRAIA 297
CPKGLNPG+AIA
Sbjct: 244 CPKGLNPGKAIA 255
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 62 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYL 148
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 150
>gi|45185623|ref|NP_983339.1| ACL065Cp [Ashbya gossypii ATCC 10895]
gi|51701412|sp|Q75CI4.1|DHSB_ASHGO RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|44981341|gb|AAS51163.1| ACL065Cp [Ashbya gossypii ATCC 10895]
gi|374106545|gb|AEY95454.1| FACL065Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/253 (56%), Positives = 162/253 (64%), Gaps = 55/253 (21%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------- 150
IR AA SA +YK+F IYRWNPD P EKP MQEYKVDLN
Sbjct: 13 IRGLATQAAEVSAT------RYKSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALI 66
Query: 151 --------------------------------------KID-ANDKVSKIYPLPHMYVVK 171
KID A +K KIYPLPHMYVVK
Sbjct: 67 KIKNEQDPTLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQAENKDVKIYPLPHMYVVK 126
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ NFY QYKSIQP+LQ+ + ++LQS+ DRKKLDGLYECILCACCST+CPS
Sbjct: 127 DLVPDLTNFYKQYKSIQPYLQKASKPADGREHLQSIADRKKLDGLYECILCACCSTACPS 186
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN E+YLGPAVLMQAYRW++DSRD A R QL++ SVYRCHTIMNCTRTCPKGLN
Sbjct: 187 YWWNNEQYLGPAVLMQAYRWMVDSRDGAGAGRREQLQNAMSVYRCHTIMNCTRTCPKGLN 246
Query: 292 PGRAIAEIKKLLS 304
PG+AIAEIKK L+
Sbjct: 247 PGKAIAEIKKALA 259
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNIGG NTLAC+ KID A +K KIYPL
Sbjct: 60 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQAENKDVKIYPL 119
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKSIQ +L
Sbjct: 120 PHMYVVKDLVPDLTNFYKQYKSIQPYL 146
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID A +K KIYPLPHMYVVKDLVPD+ NFY QYKSIQP+L ++
Sbjct: 101 ACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYLQKA 149
>gi|89573807|gb|ABD77129.1| succinate dehydrogenase complex subunit B [Sminthopsis douglasi]
Length = 240
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 160/225 (71%), Gaps = 50/225 (22%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K FAIYRW+PDKP +KP MQ Y+VDLN
Sbjct: 16 RLKKFAIYRWDPDKPGDKPRMQTYEVDLNRCGPMVLDALIKIKNEMDATLTFRRSCREGI 75
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ID+N KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L
Sbjct: 76 CGSCAMNINGGNTLACTRRIDSNLSKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYL 135
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 136 KKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 195
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
W+IDSRD+ T +RL QL+DPFS+YRCHTIMNCTRTCPKGLNPG+A
Sbjct: 196 WMIDSRDDFTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKA 240
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID+N KVSKIYPL
Sbjct: 49 MVLDALIKIKNEMDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDSNLSKVSKIYPL 108
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD+NNFYAQYKSIQ +L
Sbjct: 109 PHMYVMKDLVPDLNNFYAQYKSIQPYL 135
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID+N KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L +
Sbjct: 86 GNTLACTRRIDSNLSKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYLKK 137
>gi|89573821|gb|ABD77136.1| succinate dehydrogenase complex subunit B [Cavia porcellus]
Length = 255
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 165/241 (68%), Gaps = 50/241 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------- 149
L A + A++ + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 14 LQACRGAQTAADRAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNE 73
Query: 150 --------------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPD 176
+ID N DKVSKIYPLPHMYV+KDLVPD
Sbjct: 74 MDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPD 133
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
+NNFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 134 LNNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWN 193
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLNPG+A
Sbjct: 194 ADKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKA 253
Query: 296 I 296
+
Sbjct: 254 L 254
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 62 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD+NNFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 122 PHMYVIKDLVPDLNNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCA 181
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 182 CCSTSCPS-----------YWWNADKYLGPAVLMQAYRWMIDSRDDFTEE 220
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD+NNFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLNNFYAQYKSIEPYLKK 150
>gi|427787855|gb|JAA59379.1| Putative succinate dehydrogenase fe-s protein subunit
[Rhipicephalus pulchellus]
Length = 285
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 168/269 (62%), Gaps = 50/269 (18%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----- 150
LT+ R L AA++A K F +YRW+P+K +KP +Q ++VDLN
Sbjct: 13 LTSHTARLASLRHAAAAATAPAGTKGVKKFEVYRWDPEKKGDKPRLQTFEVDLNKCGPMV 72
Query: 151 -------------------------------------------KIDAND-KVSKIYPLPH 166
KID N K +KIYPLPH
Sbjct: 73 LDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGSNTLACICKIDENTTKATKIYPLPH 132
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACC 225
MYVVKDLVPDM FY QYKS+QPWLQ+ IG Q LQS+ DRKKLDGLYECILCACC
Sbjct: 133 MYVVKDLVPDMQLFYEQYKSVQPWLQKKTAYKIGEHQNLQSIGDRKKLDGLYECILCACC 192
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWN +Y+GPA LMQ YRW+IDSRD+ A+RL +L+DPFS+YRCHTIMNCTRT
Sbjct: 193 STSCPSYWWNSNRYMGPAALMQVYRWVIDSRDDNAAERLKRLEDPFSMYRCHTIMNCTRT 252
Query: 286 CPKGLNPGRAIAEIKKLLSGLVKKDKPGL 314
CPKGLNPG+AI E+KKL+ GL K KP L
Sbjct: 253 CPKGLNPGKAIGELKKLVGGLAHKAKPEL 281
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI KID N K +KIYPL
Sbjct: 71 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGSNTLACICKIDENTTKATKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM FY QYKS+Q PW
Sbjct: 131 PHMYVVKDLVPDMQLFYEQYKSVQ-----PW 156
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID N K +KIYPLPHMYVVKDLVPDM FY QYKS+QPWL +
Sbjct: 112 ACICKIDENTTKATKIYPLPHMYVVKDLVPDMQLFYEQYKSVQPWLQK 159
>gi|89573851|gb|ABD77151.1| succinate dehydrogenase complex subunit B [Sus scrofa]
Length = 252
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/259 (54%), Positives = 171/259 (66%), Gaps = 58/259 (22%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 2 PATTLGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDL 53
Query: 149 NN------------------------------------------------KIDAN-DKVS 159
NN +ID N +KVS
Sbjct: 54 NNCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVS 113
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYE
Sbjct: 114 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYE 173
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 174 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 233
Query: 279 IMNCTRTCPKGLNPGRAIA 297
IMNCT TCPKGLNPG+AIA
Sbjct: 234 IMNCTGTCPKGLNPGKAIA 252
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 59 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 119 PHMYVIKDLVPDLSNFYAQYKSIEPYL 145
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 96 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 147
>gi|56435063|gb|AAV91323.1| succinate dehydrogenase iron-sulfur protein [Schistosoma japonicum]
gi|56757549|gb|AAW26938.1| SJCHGC06829 protein [Schistosoma japonicum]
gi|226470530|emb|CAX70545.1| succinate dehydrogenase complex, subunit B, iron sulfur
[Schistosoma japonicum]
gi|226470532|emb|CAX70546.1| succinate dehydrogenase complex, subunit B, iron sulfur
[Schistosoma japonicum]
gi|226470534|emb|CAX70547.1| succinate dehydrogenase complex, subunit B, iron sulfur
[Schistosoma japonicum]
gi|226470536|emb|CAX70548.1| succinate dehydrogenase complex, subunit B, iron sulfur
[Schistosoma japonicum]
gi|226487080|emb|CAX75405.1| succinate dehydrogenase complex, subunit B, iron sulfur
[Schistosoma japonicum]
Length = 278
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/264 (52%), Positives = 177/264 (67%), Gaps = 54/264 (20%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN- 150
+L +L+ SF+L S+A +E + KTF+IYRWNPDKP EKP+MQ Y+VDLN+
Sbjct: 1 MLKSLSTLQSASFKLVRYVSTA--SELAPRIKTFSIYRWNPDKPGEKPSMQNYQVDLNDC 58
Query: 151 -----------------------------------------------KIDAN-DKVSKIY 162
+ID + K +KIY
Sbjct: 59 GPMVLDALIKIKNEQDSTLTFRRSCREGICGSCAMNIGGRNHLACIWEIDQDVSKPTKIY 118
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR---DKENIGNAQYLQSLDDRKKLDGLYEC 219
PLPHMYV+KDL+PDMNNFYAQY+ I+P+L++ +E+IG Y QS++DR KLDGLYEC
Sbjct: 119 PLPHMYVIKDLIPDMNNFYAQYRFIEPYLKKKNVTEEDIGKKTYYQSVEDRAKLDGLYEC 178
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG+KYLGPAVL+QAYRW++DSRD+ T +RL++ ++ +S+YRCHTI
Sbjct: 179 ILCACCSTSCPSYWWNGDKYLGPAVLLQAYRWLVDSRDDYTYERLSEFQNKWSLYRCHTI 238
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT TCPKGLNPG AI EIKK+L
Sbjct: 239 MNCTETCPKGLNPGLAIGEIKKML 262
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE D TLTFRRSCREGICGSCAMNIGG N LACI +ID + K +KIYPL
Sbjct: 61 MVLDALIKIKNEQDSTLTFRRSCREGICGSCAMNIGGRNHLACIWEIDQDVSKPTKIYPL 120
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDL+PDMNNFYAQY+ I+ +L
Sbjct: 121 PHMYVIKDLIPDMNNFYAQYRFIEPYL 147
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + +ID + K +KIYPLPHMYV+KDL+PDMNNFYAQY+ I+P+L +
Sbjct: 102 ACIWEIDQDVSKPTKIYPLPHMYVIKDLIPDMNNFYAQYRFIEPYLKK 149
>gi|89573847|gb|ABD77149.1| succinate dehydrogenase complex subunit B [Balaenoptera physalus]
Length = 257
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 165/245 (67%), Gaps = 50/245 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 13 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNE 72
Query: 151 ---------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPD 176
+ID N +KVSKIYPLPHMYV+KDLVPD
Sbjct: 73 IDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPD 132
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 133 LSNFYAQYKSIEPYLKKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWN 192
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT TCPKGLNPG+A
Sbjct: 193 GDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTNTCPKGLNPGKA 252
Query: 296 IAEIK 300
+ K
Sbjct: 253 MXXKK 257
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 61 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 120
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 121 PHMYVIKDLVPDLSNFYAQYKSIEPYL 147
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 98 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 149
>gi|89573837|gb|ABD77144.1| succinate dehydrogenase complex subunit B [Felis catus]
Length = 253
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 169/257 (65%), Gaps = 58/257 (22%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 5 PATALGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPRMQTYEIDL 56
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+ID+ KVS
Sbjct: 57 NKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVS 116
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYE
Sbjct: 117 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYE 176
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 177 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 236
Query: 279 IMNCTRTCPKGLNPGRA 295
IMNCTRTCPKGLNPG+A
Sbjct: 237 IMNCTRTCPKGLNPGKA 253
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 62 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYL 148
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 150
>gi|89573843|gb|ABD77147.1| succinate dehydrogenase complex subunit B [Diceros bicornis]
Length = 257
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 139/258 (53%), Positives = 170/258 (65%), Gaps = 58/258 (22%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 5 PATALGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDL 56
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+ID+ KVS
Sbjct: 57 NKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVS 116
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYE
Sbjct: 117 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQQGKQQYLQSIEDREKLDGLYE 176
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 177 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 236
Query: 279 IMNCTRTCPKGLNPGRAI 296
IMNCT+TCPKGLNPG+A+
Sbjct: 237 IMNCTKTCPKGLNPGKAM 254
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 62 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYL 148
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 150
>gi|50285775|ref|XP_445316.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701395|sp|Q6FWS8.1|DHSB_CANGA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|49524620|emb|CAG58222.1| unnamed protein product [Candida glabrata]
Length = 253
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 159/250 (63%), Gaps = 49/250 (19%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------- 150
F L + A + KTF IYRWNPDKP EKP +QEYKVDL +
Sbjct: 2 FMLRVSRRGLATATSVPRLKTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIK 61
Query: 151 -----------------------------------KIDAND-KVSKIYPLPHMYVVKDLV 174
KID ++ K +KIYPLPHM++VKDLV
Sbjct: 62 NEQDATLTFRRSCREGICGSCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLV 121
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSIQP+LQR + LQS+DDRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 122 PDLTGFYQQYKSIQPYLQRTDYPADGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWW 181
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPAVLMQAYRW+IDSRD+ T R L++ S+YRCHTIMNCTRTCPKGLNPGR
Sbjct: 182 NQEEYLGPAVLMQAYRWLIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGR 241
Query: 295 AIAEIKKLLS 304
+IAEIKK L+
Sbjct: 242 SIAEIKKQLA 251
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ KID ++ K +KIYPL
Sbjct: 52 MVLDALLKIKNEQDATLTFRRSCREGICGSCAMNIGGANTLACLCKIDQDESKTTKIYPL 111
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM++VKDLVPD+ FY QYKSIQ +L
Sbjct: 112 PHMFIVKDLVPDLTGFYQQYKSIQPYL 138
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID ++ K +KIYPLPHM++VKDLVPD+ FY QYKSIQP+L R+
Sbjct: 93 ACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSIQPYLQRT 141
>gi|195448102|ref|XP_002071510.1| GK25101 [Drosophila willistoni]
gi|194167595|gb|EDW82496.1| GK25101 [Drosophila willistoni]
Length = 366
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/253 (53%), Positives = 162/253 (64%), Gaps = 52/253 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------- 150
K + K+F +YRW P D KP MQ Y +DLN+
Sbjct: 114 KEKRMKSFEVYRWKPG--DNKPEMQTYDIDLNDCGAMVLDALIKIKNEMDQTLTFRRSCR 171
Query: 151 ---------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
ID + ++ +IYPLPH+YVV+DLVPD+ FY QY+SIQP
Sbjct: 172 EGICGSCAMNIDGTNTLACITAINTKRGPCRIYPLPHLYVVRDLVPDLTQFYDQYRSIQP 231
Query: 190 WLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
WLQR K +G AQYLQSL+DR+KLDGLYECILCACC T+CPSYWWN EKYLGPAVLMQ
Sbjct: 232 WLQRGNIKNELGKAQYLQSLEDREKLDGLYECILCACCQTACPSYWWNSEKYLGPAVLMQ 291
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLV 307
AYRWIIDSRDE T RL L+DP+ +YRCHTI+NCT TCPK LNP RAI ++K++L G
Sbjct: 292 AYRWIIDSRDEATEQRLGFLQDPYKLYRCHTILNCTNTCPKNLNPARAIIQLKQMLMGTK 351
Query: 308 KKDKPGLDTAALH 320
KKD+P L T ALH
Sbjct: 352 KKDQPKLKTDALH 364
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 96/160 (60%), Gaps = 28/160 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLACI+ I+ +IYPLP
Sbjct: 148 MVLDALIKIKNEMDQTLTFRRSCREGICGSCAMNIDGTNTLACITAINTKRGPCRIYPLP 207
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTL-----TAKNIRSFQ---------- 105
H+YVV+DLVPD+ FY QY+SIQ PW G + A+ ++S +
Sbjct: 208 HLYVVRDLVPDLTQFYDQYRSIQ-----PWLQRGNIKNELGKAQYLQSLEDREKLDGLYE 262
Query: 106 --LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A +A P+ KY A+ YRW D DE
Sbjct: 263 CILCACCQTACPSYWWNSEKYLGPAVLMQAYRWIIDSRDE 302
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + I+ +IYPLPH+YVV+DLVPD+ FY QY+SIQPWL R
Sbjct: 189 ACITAINTKRGPCRIYPLPHLYVVRDLVPDLTQFYDQYRSIQPWLQRG 236
>gi|363756562|ref|XP_003648497.1| hypothetical protein Ecym_8411 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891697|gb|AET41680.1| Hypothetical protein Ecym_8411 [Eremothecium cymbalariae
DBVPG#7215]
Length = 263
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 158/233 (67%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
++KTF IYRWNPDKP EKP +Q Y V+L+
Sbjct: 29 RFKTFKIYRWNPDKPAEKPRLQSYDVNLDECGPMVLDALIKIKNEQDSTLTFRRSCREGI 88
Query: 151 ------------------KIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID +++ + K+YPLPHMYVVKDLVPD+ NFY QYKS+QP+L
Sbjct: 89 CGSCAMNINGRNTLACLCKIDQDERKNLKVYPLPHMYVVKDLVPDLTNFYKQYKSVQPYL 148
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + + LQS+DDRKKLDGLYECILCACCST+CPSYWWN E+YLGPAVLMQAYRW
Sbjct: 149 QRTAKPADGKENLQSIDDRKKLDGLYECILCACCSTACPSYWWNNEQYLGPAVLMQAYRW 208
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
IIDSRDE TA R + L++ SVYRCHTIMNCT+TCPKGLNPGRAIAEIKK L+
Sbjct: 209 IIDSRDEATAKRKDMLQNSMSVYRCHTIMNCTKTCPKGLNPGRAIAEIKKALA 261
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE D TLTFRRSCREGICGSCAMNI G NTLAC+ KID +++ + K+YPL
Sbjct: 62 MVLDALIKIKNEQDSTLTFRRSCREGICGSCAMNINGRNTLACLCKIDQDERKNLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKS+Q +L
Sbjct: 122 PHMYVVKDLVPDLTNFYKQYKSVQPYL 148
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID +++ + K+YPLPHMYVVKDLVPD+ NFY QYKS+QP+L R+
Sbjct: 103 ACLCKIDQDERKNLKVYPLPHMYVVKDLVPDLTNFYKQYKSVQPYLQRT 151
>gi|425772704|gb|EKV11100.1| Iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Penicillium digitatum Pd1]
gi|425773470|gb|EKV11823.1| Iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Penicillium digitatum PHI26]
Length = 271
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/251 (54%), Positives = 164/251 (65%), Gaps = 50/251 (19%)
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------- 149
+F + A P+E+P K KTF IYRWNPD+P EKP MQ Y +DLN
Sbjct: 21 AFARTYATVEPTPSEQP-KMKTFKIYRWNPDQPSEKPQMQSYDLDLNKTGPMMLDALIRI 79
Query: 150 -NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDL 173
N++D D V S+IYPLPH YVVKDL
Sbjct: 80 KNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKTESRIYPLPHTYVVKDL 139
Query: 174 VPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
VPDM +FY QYKSI+P+LQRD ++ QS +DRKKLDGLYECILCACCSTSCPSYW
Sbjct: 140 VPDMTHFYKQYKSIKPYLQRDTPTEDGLEFRQSPEDRKKLDGLYECILCACCSTSCPSYW 199
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN E+YLGPA+L+Q++RW+ DSRDEKTA+R L + SVYRCHTI+NCTRTCPKGLNPG
Sbjct: 200 WNSEEYLGPAILLQSFRWLADSRDEKTAERKAALDNSMSVYRCHTILNCTRTCPKGLNPG 259
Query: 294 RAIAEIKKLLS 304
RAIAEIKK+L+
Sbjct: 260 RAIAEIKKMLA 270
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKV-SKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 71 MMLDALIRIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKTESRIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM +FY QYKSI+ +L
Sbjct: 131 PHTYVVKDLVPDMTHFYKQYKSIKPYL 157
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDANDKV-SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPDM +FY QYKSI+P+L R
Sbjct: 107 GVNTLACLCRIPTDTKTESRIYPLPHTYVVKDLVPDMTHFYKQYKSIKPYLQR 159
>gi|255954547|ref|XP_002568026.1| Pc21g09900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589737|emb|CAP95887.1| Pc21g09900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 271
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 163/250 (65%), Gaps = 50/250 (20%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
F + A P+E+P K KTF +YRWNPD+P EKP MQ Y +DLN
Sbjct: 22 FARTYATVEPTPSEQP-KMKTFKVYRWNPDQPSEKPQMQSYDLDLNKTGPMMLDALIRIK 80
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V S+IYPLPH YVVKDLV
Sbjct: 81 NELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKTESRIYPLPHTYVVKDLV 140
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PDM +FY QYKSI+P+LQRD ++ QS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 141 PDMTHFYKQYKSIKPYLQRDTPTEDGLEFRQSPEDRKKLDGLYECILCACCSTSCPSYWW 200
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPAVL+Q++RW+ DSRDEKTA+R L + SVYRCHTI+NCTRTCPKGLNPGR
Sbjct: 201 NSEEYLGPAVLLQSFRWLADSRDEKTAERKAALDNSMSVYRCHTILNCTRTCPKGLNPGR 260
Query: 295 AIAEIKKLLS 304
AIAEIKK+L+
Sbjct: 261 AIAEIKKMLA 270
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKV-SKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 71 MMLDALIRIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKTESRIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM +FY QYKSI+ +L
Sbjct: 131 PHTYVVKDLVPDMTHFYKQYKSIKPYL 157
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDANDKV-SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPDM +FY QYKSI+P+L R
Sbjct: 107 GVNTLACLCRIPTDTKTESRIYPLPHTYVVKDLVPDMTHFYKQYKSIKPYLQR 159
>gi|167527035|ref|XP_001747850.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773599|gb|EDQ87237.1| predicted protein [Monosiga brevicollis MX1]
Length = 312
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 170/258 (65%), Gaps = 50/258 (19%)
Query: 93 LGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-- 150
L TL + ++++ SA +++ A P K K+F+IYRW+P++P +KP MQEY +D+N+
Sbjct: 51 LRTLRSASMKAVSFSAVRAASTEAAAP-KMKSFSIYRWDPERPGDKPRMQEYSIDMNSCG 109
Query: 151 ----------------------------------KIDANDKVS-------------KIYP 163
ID + ++ KI P
Sbjct: 110 PMVLDALIKIKNEQDPTLTFRRSCREGICGSCSMNIDGTNTLACLCRVTTESSSAMKINP 169
Query: 164 LPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCA 223
LPHMYVVKDLVPDM NFY QY++I+PWLQ DK +YLQS++DRKKLDG+YECILCA
Sbjct: 170 LPHMYVVKDLVPDMANFYQQYQAIEPWLQTDKAPEDGREYLQSVEDRKKLDGMYECILCA 229
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWWN ++YLGPA LMQA RW+ DSRD++ +R+ +L+DPFS+YRCHTIMNCT
Sbjct: 230 CCSTSCPSYWWNMDQYLGPAALMQARRWMADSRDDRAKERMEKLRDPFSMYRCHTIMNCT 289
Query: 284 RTCPKGLNPGRAIAEIKK 301
+TCPK LNPG+AIAEIK+
Sbjct: 290 KTCPKHLNPGKAIAEIKR 307
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 72/91 (79%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSC+MNI G NTLAC+ ++ + KI PL
Sbjct: 111 MVLDALIKIKNEQDPTLTFRRSCREGICGSCSMNIDGTNTLACLCRVTTESSSAMKINPL 170
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM NFY QY++I+ PW
Sbjct: 171 PHMYVVKDLVPDMANFYQQYQAIE-----PW 196
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 27/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ E+ G MQ Y ++S D L ++K DP +R R+C +
Sbjct: 85 YRWDPERP-GDKPRMQEYSIDMNSCGPMVLDALIKIKNEQDPTLTFR--------RSCRE 135
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A L ++ + KI PLPHMYVVKDLVPD
Sbjct: 136 GI-------------CGSCSMNIDGTNTLACLCRVTTESSSAMKINPLPHMYVVKDLVPD 182
Query: 347 MNNFYAQYKSIQPWL 361
M NFY QY++I+PWL
Sbjct: 183 MANFYQQYQAIEPWL 197
>gi|89573835|gb|ABD77143.1| succinate dehydrogenase complex subunit B [Canis lupus familiaris]
Length = 250
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 167/255 (65%), Gaps = 58/255 (22%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 4 PAAALGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDL 55
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+ID+ KVS
Sbjct: 56 NKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVS 115
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYE
Sbjct: 116 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYE 175
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 176 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 235
Query: 279 IMNCTRTCPKGLNPG 293
IMNCTRTCPKGLNPG
Sbjct: 236 IMNCTRTCPKGLNPG 250
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 61 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 120
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 121 PHMYVIKDLVPDLSNFYAQYKSIEPYL 147
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 98 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 149
>gi|302902798|ref|XP_003048721.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729655|gb|EEU43008.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 257
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 158/229 (68%), Gaps = 28/229 (12%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
F S A+ S P E K+F IYRWNPD P EKP +Q Y +DLN
Sbjct: 26 FSRSMASVSEAPQEPKPNMKSFQIYRWNPDTPSEKPRLQTYTLDLNKTGPMILDALIRIK 85
Query: 150 NKID--------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
N++D + KIYPLPH YVVKDLVPD+ +FY QYKSI+P+LQRD
Sbjct: 86 NELDPTVTFRRSCRRIPAESSSDVKIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQRDT 145
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+Y Q+ +DR+KLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DS
Sbjct: 146 PAEDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADS 205
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
RDE+TA+R N L++ S+YRCHTI+NCTR CPKGLNPG+AIAEIKK ++
Sbjct: 206 RDERTAERKNNLENSMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 254
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 20/86 (23%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALI+IKNE+DPT+TFRRSCR I ++D KIYPLP
Sbjct: 76 MILDALIRIKNELDPTVTFRRSCRR------------------IPAESSSD--VKIYPLP 115
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 116 HTYVVKDLVPDLTHFYKQYKSIKPYL 141
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 110 KIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 143
>gi|307206434|gb|EFN84472.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Harpegnathos saltator]
Length = 226
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/168 (74%), Positives = 145/168 (86%), Gaps = 3/168 (1%)
Query: 150 NKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSL 207
+KID N S K+YPLPHMY+VKDLVPD+NNFY QY++IQPWLQR D + G QYLQS+
Sbjct: 58 SKIDTNTSTSCKVYPLPHMYIVKDLVPDLNNFYTQYRNIQPWLQRSDTKETGKQQYLQSV 117
Query: 208 DDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL 267
+DRKKLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRWIIDSRD + +RL +L
Sbjct: 118 EDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIIDSRDTQAKERLEKL 177
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLV-KKDKPGL 314
KDPFSV+RCHTIMNCT TCPKGLNPG+AIA++KKLL+ +K +P L
Sbjct: 178 KDPFSVFRCHTIMNCTHTCPKGLNPGKAIAKLKKLLANAASQKQQPSL 225
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 78/91 (85%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLACISKID N S K+YPL
Sbjct: 14 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIEGTNTLACISKIDTNTSTSCKVYPL 73
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+NNFY QY++IQ PW
Sbjct: 74 PHMYIVKDLVPDLNNFYTQYRNIQ-----PW 99
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 26/124 (20%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y+ +++ D L ++K DP +R R+C +G+
Sbjct: 1 MQKYKIDLNACGPMVLDALIKIKNEMDPTLTFR--------RSCREGI------------ 40
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A + KID N S K+YPLPHMY+VKDLVPD+NNFY QY++IQPW
Sbjct: 41 -CGSCAMNIEGTNTLACISKIDTNTSTSCKVYPLPHMYIVKDLVPDLNNFYTQYRNIQPW 99
Query: 361 LPRS 364
L RS
Sbjct: 100 LQRS 103
>gi|156395206|ref|XP_001637002.1| predicted protein [Nematostella vectensis]
gi|156224111|gb|EDO44939.1| predicted protein [Nematostella vectensis]
Length = 284
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/245 (54%), Positives = 167/245 (68%), Gaps = 50/245 (20%)
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------- 150
AS+A + +YKTF++YRW+PDK +KP MQE+KVDLN+
Sbjct: 29 ASAAAATSQEPRYKTFSVYRWDPDKAGDKPRMQEFKVDLNDCGPMVLDALIKIKNEVDPT 88
Query: 151 -----------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFY 181
+I+ +K +KIYPLPHMYVVKDLVPDM +FY
Sbjct: 89 LTFRRSCREGICGSCAMNIGGKNTLACICRIEDLNKPTKIYPLPHMYVVKDLVPDMAHFY 148
Query: 182 AQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
QY+SI+P+L++ ++ G QYLQS+DDRKKLDGLYECILCACCSTSCPSYWWN +KYL
Sbjct: 149 EQYRSIEPYLKKKEQVEYGKEQYLQSIDDRKKLDGLYECILCACCSTSCPSYWWNADKYL 208
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
GPAVLMQAYRW+IDSRD+ TA+R+ + D + V+RCHTIMNCT TCPKGLNPG AIAEI
Sbjct: 209 GPAVLMQAYRWMIDSRDDFTAERVAFMDTDEYKVFRCHTIMNCTLTCPKGLNPGLAIAEI 268
Query: 300 KKLLS 304
KK+++
Sbjct: 269 KKMVA 273
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 78/86 (90%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI +I+ +K +KIYPLP
Sbjct: 73 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGKNTLACICRIEDLNKPTKIYPLP 132
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMYVVKDLVPDM +FY QY+SI+ +L
Sbjct: 133 HMYVVKDLVPDMAHFYEQYRSIEPYL 158
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + +I+ +K +KIYPLPHMYVVKDLVPDM +FY QY+SI+P+L +
Sbjct: 114 ACICRIEDLNKPTKIYPLPHMYVVKDLVPDMAHFYEQYRSIEPYLKK 160
>gi|195345583|ref|XP_002039348.1| GM22932 [Drosophila sechellia]
gi|194134574|gb|EDW56090.1| GM22932 [Drosophila sechellia]
Length = 440
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 164/257 (63%), Gaps = 55/257 (21%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------ 149
V A+KP + KTF IYRW KP ++P Q Y+VDL
Sbjct: 183 VKAKKP-RLKTFEIYRW---KPGDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFR 238
Query: 150 ------------------------NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQY 184
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY
Sbjct: 239 RSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQY 298
Query: 185 KSIQPWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
+SIQPWLQR K G+AQYLQS+DDR LDGLYECILCACC TSCPSYWWN KYLGP
Sbjct: 299 RSIQPWLQRKDLKREAGSAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGP 358
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AVLMQAYRW+IDSRDE T RL+ LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+L
Sbjct: 359 AVLMQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQL 418
Query: 303 LSGLVKKDKPGLDTAAL 319
L GL KK KP L T AL
Sbjct: 419 LVGLKKKGKPQLKTDAL 435
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 219 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 278
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 279 PHLYVVRDLVPDMSQFYDQYRSIQ-----PW 304
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 260 ACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQR 307
>gi|346471287|gb|AEO35488.1| hypothetical protein [Amblyomma maculatum]
Length = 285
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/246 (53%), Positives = 159/246 (64%), Gaps = 50/246 (20%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F +YRW+P+K +KP +Q Y+VDLN
Sbjct: 40 KKFEVYRWDPEKKGDKPRLQTYEVDLNKCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 99
Query: 151 ----------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KID N K +KIYPLPHMYVVKDLVPDM FY YK++QPWLQ+
Sbjct: 100 SCAMNINGTNTLACICKIDDNTTKSTKIYPLPHMYVVKDLVPDMTLFYEHYKAVQPWLQK 159
Query: 194 DKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ +G Q LQS+ DRKKLDGLYECILCACCSTSCPSYWWN +YLGPA LMQ YRW+
Sbjct: 160 KTDVKVGEHQNLQSISDRKKLDGLYECILCACCSTSCPSYWWNSNRYLGPAALMQVYRWV 219
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKP 312
IDSRDE T +RL +L+DPF+++RCHTIMNCTR CPKGLNPG+AI E+KKL++G+ +K K
Sbjct: 220 IDSRDENTVERLKRLEDPFTMFRCHTIMNCTRACPKGLNPGKAIGELKKLVAGISQKPKA 279
Query: 313 GLDTAA 318
L A
Sbjct: 280 ELTGTA 285
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI KID N K +KIYPL
Sbjct: 71 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGTNTLACICKIDDNTTKSTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM FY YK++Q PW
Sbjct: 131 PHMYVVKDLVPDMTLFYEHYKAVQ-----PW 156
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ EK G +Q Y ++ D L ++K DP +R R+C +
Sbjct: 45 YRWDPEKK-GDKPRLQTYEVDLNKCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 95
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N K +KIYPLPHMYVVKDLVPD
Sbjct: 96 GI-------------CGSCAMNINGTNTLACICKIDDNTTKSTKIYPLPHMYVVKDLVPD 142
Query: 347 MNNFYAQYKSIQPWLPR 363
M FY YK++QPWL +
Sbjct: 143 MTLFYEHYKAVQPWLQK 159
>gi|89573839|gb|ABD77145.1| succinate dehydrogenase complex subunit B [Equus caballus]
Length = 245
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/239 (55%), Positives = 162/239 (67%), Gaps = 50/239 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NK 151
L A + A + K FAIYRW+PDK +KP MQ Y++DLN N+
Sbjct: 7 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNE 66
Query: 152 IDAN-----------------------------------DKVSKIYPLPHMYVVKDLVPD 176
ID+ KVSKIYPLPHMYV+KDLVPD
Sbjct: 67 IDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPD 126
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 127 LSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWN 186
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
G+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLNPG+
Sbjct: 187 GDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPGK 245
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 109/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 55 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 114
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 115 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCA 174
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 175 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 213
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 92 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 143
>gi|89573815|gb|ABD77133.1| succinate dehydrogenase complex subunit B [Mus musculus]
Length = 239
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/225 (59%), Positives = 159/225 (70%), Gaps = 50/225 (22%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ K FAIYRW+PDK +KP MQ Y+VDLN N++D+
Sbjct: 15 RIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGI 74
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L
Sbjct: 75 CGSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYL 134
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 135 KKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 194
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
W+IDSRD+ T +RL +L+DPFSVYRCHTIMNCT+TCPKGLNPG+A
Sbjct: 195 WMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKA 239
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 48 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 107
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 108 PHMYVIKDLVPDLSNFYAQYKSIEPYL 134
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 85 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 136
>gi|195567613|ref|XP_002107353.1| GD17417 [Drosophila simulans]
gi|194204760|gb|EDX18336.1| GD17417 [Drosophila simulans]
Length = 462
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 164/257 (63%), Gaps = 55/257 (21%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------ 149
V A+KP + KTF IYRW KP ++P Q Y+VDL
Sbjct: 205 VKAKKP-RLKTFEIYRW---KPGDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFR 260
Query: 150 ------------------------NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQY 184
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY
Sbjct: 261 RSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQY 320
Query: 185 KSIQPWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
+SIQPWLQR K G+AQYLQS+DDR LDGLYECILCACC TSCPSYWWN KYLGP
Sbjct: 321 RSIQPWLQRKDLKREAGSAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGP 380
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AVLMQAYRW+IDSRDE T RL+ LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+L
Sbjct: 381 AVLMQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQL 440
Query: 303 LSGLVKKDKPGLDTAAL 319
L GL KK KP L T AL
Sbjct: 441 LVGLKKKGKPQLKTDAL 457
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 241 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 300
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 301 PHLYVVRDLVPDMSQFYDQYRSIQ-----PW 326
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 282 ACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQR 329
>gi|303318467|ref|XP_003069233.1| Succinate dehydrogenase iron-sulfur protein,mitochondrial precursor
, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240108919|gb|EER27088.1| Succinate dehydrogenase iron-sulfur protein,mitochondrial precursor
, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320039062|gb|EFW20997.1| succinate dehydrogenase iron-sulfur subunit [Coccidioides posadasii
str. Silveira]
Length = 281
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 162/248 (65%), Gaps = 50/248 (20%)
Query: 107 SAAASSAVPAEKP-AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NK 151
S + ++ PA P AK KTF IYRW+PD+P EKP MQ Y +DLN N+
Sbjct: 32 SKSPETSNPASSPEAKNKTFHIYRWDPDRPSEKPRMQTYTIDLNKTGPMMLDALIRIKNE 91
Query: 152 IDAN-----------------------------------DKVSKIYPLPHMYVVKDLVPD 176
+D K S+IYPLPH YVVKDLVPD
Sbjct: 92 VDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPADTAKESRIYPLPHTYVVKDLVPD 151
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
M +FY QYKSI+P+LQR+ ++ + QS DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 152 MTHFYKQYKSIKPYLQRETKSPDGKEIRQSPADRKKLDGLYECILCACCSTSCPSYWWNS 211
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPA+L+Q+YRW++DSRDEKTA+R L + SVYRCHTIMNCTRTCPKGLNPG+AI
Sbjct: 212 EEYLGPAILLQSYRWLVDSRDEKTAERRAALDNSMSVYRCHTIMNCTRTCPKGLNPGKAI 271
Query: 297 AEIKKLLS 304
AEIKK L+
Sbjct: 272 AEIKKQLA 279
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 106/172 (61%), Gaps = 25/172 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I A+ K S+IYPL
Sbjct: 80 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPADTAKESRIYPL 139
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------L 106
PH YVVKDLVPDM +FY QYKSI+ +L K + K IR L
Sbjct: 140 PHTYVVKDLVPDMTHFYKQYKSIKPYLQRETK---SPDGKEIRQSPADRKKLDGLYECIL 196
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ +Y AI YRW D DEK E + L+N +
Sbjct: 197 CACCSTSCPSYWWNSEEYLGPAILLQSYRWLVDSRDEK--TAERRAALDNSM 246
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I A+ K S+IYPLPH YVVKDLVPDM +FY QYKSI+P+L R
Sbjct: 116 GVNTLACLCRIPADTAKESRIYPLPHTYVVKDLVPDMTHFYKQYKSIKPYLQR 168
>gi|119181244|ref|XP_001241858.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Coccidioides immitis RS]
gi|392864780|gb|EAS30502.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Coccidioides immitis RS]
Length = 281
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 162/248 (65%), Gaps = 50/248 (20%)
Query: 107 SAAASSAVPAEKP-AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NK 151
S + ++ PA P AK KTF IYRW+PD+P EKP MQ Y +DLN N+
Sbjct: 32 SKSPETSNPASSPEAKNKTFHIYRWDPDRPSEKPRMQTYTIDLNKTGPMMLDALIRIKNE 91
Query: 152 IDAN-----------------------------------DKVSKIYPLPHMYVVKDLVPD 176
+D K S+IYPLPH YVVKDLVPD
Sbjct: 92 VDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDAAKESRIYPLPHTYVVKDLVPD 151
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
M +FY QYKSI+P+LQR+ ++ + QS DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 152 MTHFYKQYKSIKPYLQRETKSPDGKEIRQSPADRKKLDGLYECILCACCSTSCPSYWWNS 211
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPA+L+Q+YRW++DSRDEKTA+R L + SVYRCHTIMNCTRTCPKGLNPG+AI
Sbjct: 212 EEYLGPAILLQSYRWLVDSRDEKTAERRAALDNSMSVYRCHTIMNCTRTCPKGLNPGKAI 271
Query: 297 AEIKKLLS 304
AEIKK L+
Sbjct: 272 AEIKKQLA 279
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 105/172 (61%), Gaps = 25/172 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 80 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDAAKESRIYPL 139
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------L 106
PH YVVKDLVPDM +FY QYKSI+ +L K + K IR L
Sbjct: 140 PHTYVVKDLVPDMTHFYKQYKSIKPYLQRETK---SPDGKEIRQSPADRKKLDGLYECIL 196
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ +Y AI YRW D DEK E + L+N +
Sbjct: 197 CACCSTSCPSYWWNSEEYLGPAILLQSYRWLVDSRDEK--TAERRAALDNSM 246
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPDM +FY QYKSI+P+L R
Sbjct: 116 GVNTLACLCRIPTDAAKESRIYPLPHTYVVKDLVPDMTHFYKQYKSIKPYLQR 168
>gi|221128855|ref|XP_002165357.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Hydra magnipapillata]
Length = 265
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/260 (53%), Positives = 164/260 (63%), Gaps = 54/260 (20%)
Query: 93 LGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-- 150
LG L+ K S L A +SA A K F IYRWNP+KP +KP +QEY+VDLN
Sbjct: 7 LGLLSLKTFNSIPLRNAQTSASSA-----VKVFQIYRWNPEKPGDKPRLQEYEVDLNKCG 61
Query: 151 ----------------------------------------------KIDAN-DKVSKIYP 163
KIDAN K +KIYP
Sbjct: 62 PMVLDALLAVKNEQDPTLTFRRSCREGICGSCAMNINGTNTLACTCKIDANLSKKTKIYP 121
Query: 164 LPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCA 223
LPHMYVVKDLVPDM NFY QY+ I+P+L+R+ + +QS+ DR KLDGLYECILCA
Sbjct: 122 LPHMYVVKDLVPDMTNFYEQYRYIEPYLKRNTLPADGKENIQSIKDRAKLDGLYECILCA 181
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWW+ EKYLGPAVLMQAYRWIIDSRDE +RL +L + +S+Y+CHTIMNCT
Sbjct: 182 CCSTSCPSYWWHSEKYLGPAVLMQAYRWIIDSRDEFKKERLEKLDNEYSIYKCHTIMNCT 241
Query: 284 RTCPKGLNPGRAIAEIKKLL 303
RTCPKGLNPG AI E+KK++
Sbjct: 242 RTCPKGLNPGLAIGEVKKMI 261
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 104/169 (61%), Gaps = 27/169 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+ +KNE DPTLTFRRSCREGICGSCAMNI G NTLAC KIDAN K +KIYPL
Sbjct: 63 MVLDALLAVKNEQDPTLTFRRSCREGICGSCAMNINGTNTLACTCKIDANLSKKTKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTA---KNIRSFQ----------- 105
PHMYVVKDLVPDM NFY QY+ I+ P+ TL A +NI+S +
Sbjct: 123 PHMYVVKDLVPDMTNFYEQYRYIE-----PYLKRNTLPADGKENIQSIKDRAKLDGLYEC 177
Query: 106 -LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
L A S++ P+ KY A+ YRW D DE + K+D
Sbjct: 178 ILCACCSTSCPSYWWHSEKYLGPAVLMQAYRWIIDSRDEFKKERLEKLD 226
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 69/138 (50%), Gaps = 27/138 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN EK G +Q Y ++ D L +K DP +R R+C +
Sbjct: 37 YRWNPEK-PGDKPRLQEYEVDLNKCGPMVLDALLAVKNEQDPTLTFR--------RSCRE 87
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALH-KIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A KIDAN K +KIYPLPHMYVVKDLVPD
Sbjct: 88 GI-------------CGSCAMNINGTNTLACTCKIDANLSKKTKIYPLPHMYVVKDLVPD 134
Query: 347 MNNFYAQYKSIQPWLPRS 364
M NFY QY+ I+P+L R+
Sbjct: 135 MTNFYEQYRYIEPYLKRN 152
>gi|345312387|ref|XP_001506093.2| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Ornithorhynchus anatinus]
Length = 195
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/155 (78%), Positives = 143/155 (92%), Gaps = 1/155 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLD 214
+KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLD
Sbjct: 38 NKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLD 97
Query: 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
GLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL QL+DPFS+Y
Sbjct: 98 GLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAQLQDPFSLY 157
Query: 275 RCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
RCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 158 RCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 192
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 79/131 (60%), Gaps = 18/131 (13%)
Query: 25 EGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 83
E ICGSCAMNI G NTLAC +ID + +KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+
Sbjct: 11 ERICGSCAMNINGGNTLACTRRIDPDINKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIE 70
Query: 84 RHLG-------GPWKILGTLTAK----NIRSFQLSAAASSAVPAE--KPAKYKTFAI--- 127
+L G + L ++ + + L A S++ P+ KY A+
Sbjct: 71 PYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQ 130
Query: 128 -YRWNPDKPDE 137
YRW D DE
Sbjct: 131 AYRWMIDSRDE 141
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + +KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 24 GNTLACTRRIDPDINKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 75
>gi|256087662|ref|XP_002579984.1| succinate dehydrogenase iron-sulfur protein [Schistosoma mansoni]
gi|353228485|emb|CCD74656.1| putative succinate dehydrogenase iron-sulfur protein [Schistosoma
mansoni]
Length = 277
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 167/248 (67%), Gaps = 53/248 (21%)
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------- 150
A +S P + KTF+IYRWNPDK EKPTMQ Y+VDLN+
Sbjct: 15 ARCASTATGSAP-RMKTFSIYRWNPDKRGEKPTMQNYQVDLNDCGPMVLDALIKIKNEQD 73
Query: 151 -------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMN 178
+ID + +K +KIYPLPHMYV+KDL+PDMN
Sbjct: 74 PTLTFRRSCREGICGSCAMNIEGRNHLACIWEIDPDINKTTKIYPLPHMYVIKDLIPDMN 133
Query: 179 NFYAQYKSIQPWLQR---DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
NFYAQY+ I+P+L++ D+E+IG Y QS++DR KLDGLYECILCACCSTSCPSYWWN
Sbjct: 134 NFYAQYRFIEPYLKKKNVDEEDIGKKTYYQSVEDRAKLDGLYECILCACCSTSCPSYWWN 193
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVL+QAYRW++DSRD+ T +RL + ++ +S+YRCHTIMNCT TCPKGLNPG A
Sbjct: 194 GDKYLGPAVLLQAYRWLVDSRDDYTYERLAEFQNKWSLYRCHTIMNCTETCPKGLNPGLA 253
Query: 296 IAEIKKLL 303
I EIKK+L
Sbjct: 254 IGEIKKML 261
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G N LACI +ID + +K +KIYPL
Sbjct: 60 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIEGRNHLACIWEIDPDINKTTKIYPL 119
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDL+PDMNNFYAQY+ I+ +L
Sbjct: 120 PHMYVIKDLIPDMNNFYAQYRFIEPYL 146
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + +ID + +K +KIYPLPHMYV+KDL+PDMNNFYAQY+ I+P+L +
Sbjct: 101 ACIWEIDPDINKTTKIYPLPHMYVIKDLIPDMNNFYAQYRFIEPYLKK 148
>gi|24643156|ref|NP_573340.1| CG7349 [Drosophila melanogaster]
gi|22832534|gb|AAF48905.2| CG7349 [Drosophila melanogaster]
Length = 437
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 163/257 (63%), Gaps = 55/257 (21%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------ 149
V A+KP + KTF IYRW KP ++P Q Y+VDL
Sbjct: 180 VKAKKP-RLKTFEIYRW---KPGDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFR 235
Query: 150 ------------------------NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQY 184
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY
Sbjct: 236 RSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQY 295
Query: 185 KSIQPWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
+SIQPWLQR K G AQYLQS+DDR LDGLYECILCACC TSCPSYWWN KYLGP
Sbjct: 296 RSIQPWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGP 355
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AVLMQAYRW+IDSRDE T RL+ LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+L
Sbjct: 356 AVLMQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQL 415
Query: 303 LSGLVKKDKPGLDTAAL 319
L GL KK KP L T AL
Sbjct: 416 LVGLKKKGKPQLKTDAL 432
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 216 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 275
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 276 PHLYVVRDLVPDMSQFYDQYRSIQ-----PW 301
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 257 ACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQR 304
>gi|169786051|ref|XP_001827486.1| succinate dehydrogenase (ubiquinone) iron-sulfur subunit
[Aspergillus oryzae RIB40]
gi|238506985|ref|XP_002384694.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus flavus NRRL3357]
gi|83776234|dbj|BAE66353.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689407|gb|EED45758.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus flavus NRRL3357]
gi|391866266|gb|EIT75538.1| succinate dehydrogenase, Fe-S protein subunit [Aspergillus oryzae
3.042]
Length = 278
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/254 (53%), Positives = 165/254 (64%), Gaps = 51/254 (20%)
Query: 102 RSF-QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
RS+ + AAA P+E P + KTF IYRWNPD+P EKP MQ Y +DLN
Sbjct: 25 RSYATVDAAAQDPNPSETP-RTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALI 83
Query: 150 ---NKIDAN-----------------------------------DKVSKIYPLPHMYVVK 171
N++D K S+IYPLPH YVVK
Sbjct: 84 RIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVK 143
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ FY QYKSI+P+LQR+ + +Y QS ++RKKLDGLYECILCACCSTSCPS
Sbjct: 144 DLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPS 203
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN E+YLGPA+L+Q+YRW+ DSRDEKTA+R + L + SVYRCHTI+NC+RTCPKGLN
Sbjct: 204 YWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLN 263
Query: 292 PGRAIAEIKKLLSG 305
P RAIAEIKKL++
Sbjct: 264 PARAIAEIKKLMAA 277
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 77 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAK----------NIRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L K L + + L A
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCAC 196
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 197 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 240
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 113 GVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 165
>gi|89573827|gb|ABD77139.1| succinate dehydrogenase complex subunit B [Tadarida brasiliensis]
Length = 225
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/225 (59%), Positives = 158/225 (70%), Gaps = 50/225 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN----------------------------------- 149
F RW+PDK +KP MQ Y++DLN
Sbjct: 1 FPFIRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSC 60
Query: 150 -------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-D 194
+ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D
Sbjct: 61 AMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKD 120
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+ID
Sbjct: 121 ESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMID 180
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
SRD+ T +RL +L+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEI
Sbjct: 181 SRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEI 225
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 30 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 89
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 90 PHMYVIKDLVPDLSNFYAQYKSIEPYL 116
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 67 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 118
>gi|195174646|ref|XP_002028083.1| GL21331 [Drosophila persimilis]
gi|194115823|gb|EDW37866.1| GL21331 [Drosophila persimilis]
Length = 375
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 165/262 (62%), Gaps = 54/262 (20%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------ 150
A A P K + K F IYRW +P E+P MQ Y +DL+
Sbjct: 113 AGPPAPPKTKEKRIKNFEIYRW---QPGEQPKMQTYAIDLSQCGAMVLDALIKIKNEVDQ 169
Query: 151 ------------------KIDANDKVS-------------KIYPLPHMYVVKDLVPDMNN 179
ID + ++ +IYPLPH+YVV+DLVPD++
Sbjct: 170 TLTFRRSCREGICGSCAMNIDGTNTLACVTPIDQSTSGSCRIYPLPHLYVVRDLVPDLSQ 229
Query: 180 FYAQYKSIQPWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
FY QY+SIQPWLQR+ + +G AQYLQSL+DR KLDGLYECILCACC TSCPSYWWN +
Sbjct: 230 FYEQYRSIQPWLQRNNIQNEMGKAQYLQSLEDRNKLDGLYECILCACCQTSCPSYWWNSD 289
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
KYLGPAVLMQA+RW+IDSRDE T RL L+DP+ +YRCHTI+NCT TCPK LNP RAI
Sbjct: 290 KYLGPAVLMQAFRWVIDSRDEATEQRLCFLQDPWKLYRCHTILNCTNTCPKNLNPARAII 349
Query: 298 EIKKLLSGLVKKDKPGLDTAAL 319
++K+LLSG KK+KP L T AL
Sbjct: 350 QLKQLLSGAKKKNKPELQTDAL 371
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC++ ID + S +IYPL
Sbjct: 155 MVLDALIKIKNEVDQTLTFRRSCREGICGSCAMNIDGTNTLACVTPIDQSTSGSCRIYPL 214
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPD++ FY QY+SIQ PW
Sbjct: 215 PHLYVVRDLVPDLSQFYEQYRSIQ-----PW 240
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + ID + S +IYPLPH+YVV+DLVPD++ FY QY+SIQPWL R+
Sbjct: 196 ACVTPIDQSTSGSCRIYPLPHLYVVRDLVPDLSQFYEQYRSIQPWLQRN 244
>gi|198436811|ref|XP_002127020.1| PREDICTED: similar to Sdhb-prov protein [Ciona intestinalis]
Length = 292
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 173/266 (65%), Gaps = 57/266 (21%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEK--PTMQEYKVDLN 149
+L LT + +R +A ++A E+ + KTF+IYRWNP+ + P M +Y+VDLN
Sbjct: 18 VLSLLTTQTLRC----SATAAAQTTEQNQRLKTFSIYRWNPEAEGDMKLPVMHKYQVDLN 73
Query: 150 N------------------------------------------------KIDAN-DKVSK 160
+ +ID N K +K
Sbjct: 74 DCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIGGTNTLACLARIDTNLSKKTK 133
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL-QRDKENIGNAQYLQSLDDRKKLDGLYEC 219
IYPLPHMYVVKDLVPDMNNFYAQY+SI+P+L Q+D +G + QS+ DR+KLDGLYEC
Sbjct: 134 IYPLPHMYVVKDLVPDMNNFYAQYRSIEPFLKQKDASKLGKENF-QSVADRQKLDGLYEC 192
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWW+ +KYLGPAVLMQAYRWIIDSRDE +RL+++ DPFS+Y+CHTI
Sbjct: 193 ILCACCSTSCPSYWWSSDKYLGPAVLMQAYRWIIDSRDEYQKERLDRMNDPFSLYKCHTI 252
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLSG 305
MNCT+ CPKGLNPG AIAE+KK+L+
Sbjct: 253 MNCTKACPKGLNPGLAIAELKKMLAS 278
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 102/156 (65%), Gaps = 21/156 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNIGG NTLAC+++ID N K +KIYPL
Sbjct: 78 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIGGTNTLACLARIDTNLSKKTKIYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LS 107
PHMYVVKDLVPDMNNFYAQY+SI+ L K L +N +S L
Sbjct: 138 PHMYVVKDLVPDMNNFYAQYRSIEPFLKQ--KDASKLGKENFQSVADRQKLDGLYECILC 195
Query: 108 AAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A S++ P+ KY A+ YRW D DE
Sbjct: 196 ACCSTSCPSYWWSSDKYLGPAVLMQAYRWIIDSRDE 231
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID N K +KIYPLPHMYVVKDLVPDMNNFYAQY+SI+P+L
Sbjct: 119 ACLARIDTNLSKKTKIYPLPHMYVVKDLVPDMNNFYAQYRSIEPFL 164
>gi|322692734|gb|EFY84626.1| succinate dehydrogenase iron-sulfur protein precursor [Metarhizium
acridum CQMa 102]
Length = 277
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 166/266 (62%), Gaps = 52/266 (19%)
Query: 91 KILGTLTAKNIRS---FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD 147
+ILG+ +R F S A+ S VP EK KTF IYRWNPD P EKP MQ Y +D
Sbjct: 10 RILGSSIRTAMRPGAVFTRSMASVSEVPHEKAPNMKTFQIYRWNPDTPTEKPRMQSYTID 69
Query: 148 LN--------------NKID-----------------------------------ANDKV 158
LN N++D +
Sbjct: 70 LNKTGPMVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSSE 129
Query: 159 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
K+YPLPH YVVKDLVPD+ FY QYKSI+P+LQRD + +Y QS +DRKKLDGLYE
Sbjct: 130 VKLYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTPSPDGKEYRQSKEDRKKLDGLYE 189
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE++A+R L++ S+YRCHT
Sbjct: 190 CILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERSAERRANLENNMSLYRCHT 249
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NCTR CPKGLNPG+AIAEIKK ++
Sbjct: 250 ILNCTRACPKGLNPGKAIAEIKKQMA 275
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A K+YPL
Sbjct: 76 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSSEVKLYPL 135
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 136 PHTYVVKDLVPDLTYFYKQYKSIKPYL 162
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I A K+YPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 117 ACLCRIPAESSSEVKLYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 164
>gi|50307957|ref|XP_453977.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643112|emb|CAG99064.1| KLLA0E00683p [Kluyveromyces lactis]
Length = 254
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 160/248 (64%), Gaps = 54/248 (21%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L+ A + P + KTF IYRW+PD+P EKP +QEY+VDLN
Sbjct: 10 LATEAKAVAP-----RLKTFKIYRWSPDRPAEKPRLQEYQVDLNQCGPMVLDALIKIKNE 64
Query: 151 ---------------------------------KIDAND-KVSKIYPLPHMYVVKDLVPD 176
+ID N+ K +KIYPLPHMY+V+DLVPD
Sbjct: 65 QDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDQNENKQTKIYPLPHMYIVRDLVPD 124
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ +FY QYKSIQP+LQR + + LQS+ DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 125 LTHFYKQYKSIQPYLQRSEVPADGKENLQSIADRKKLDGLYECILCACCSTSCPSYWWNQ 184
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPAVLMQAYRW++DSRDE R L++ S+YRCHTIMNCTRTCPKGLNPGRAI
Sbjct: 185 EQYLGPAVLMQAYRWLVDSRDEAAGIRKQMLQNSMSLYRCHTIMNCTRTCPKGLNPGRAI 244
Query: 297 AEIKKLLS 304
AEIKK L+
Sbjct: 245 AEIKKALA 252
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ +ID N+ K +KIYPL
Sbjct: 53 MVLDALIKIKNEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDQNENKQTKIYPL 112
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+V+DLVPD+ +FY QYKSIQ +L
Sbjct: 113 PHMYIVRDLVPDLTHFYKQYKSIQPYL 139
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L +ID N+ K +KIYPLPHMY+V+DLVPD+ +FY QYKSIQP+L RS
Sbjct: 94 ACLCRIDQNENKQTKIYPLPHMYIVRDLVPDLTHFYKQYKSIQPYLQRS 142
>gi|241253049|ref|XP_002403788.1| succinate dehydrogenase, putative [Ixodes scapularis]
gi|215496562|gb|EEC06202.1| succinate dehydrogenase, putative [Ixodes scapularis]
Length = 286
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/264 (53%), Positives = 168/264 (63%), Gaps = 55/264 (20%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------- 150
FQL AA++A K K F IYRWNP+K +KP +Q Y+VDLN
Sbjct: 29 FQLRHAAAAAPAGNKGVK--KFEIYRWNPEKKGDKPRLQTYEVDLNACGPMVLDALIKIK 86
Query: 151 -----------------------------------KIDANDKVSKIYPLPHMYVVKDLVP 175
KID + +KIYPLPHMYVVKDLVP
Sbjct: 87 NEVDPTLTFRRSCREGICGSCAMNIDGRNTLACICKIDNPGQSTKIYPLPHMYVVKDLVP 146
Query: 176 DMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
QYKSIQPWLQ+ E +G Q+LQS++DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 147 ----VSGQYKSIQPWLQKKTEVKLGEQQHLQSIEDRKKLDGLYECILCACCSTSCPSYWW 202
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N ++YLGPA LMQ YRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPK LNPGR
Sbjct: 203 NSDRYLGPAALMQVYRWVIDSRDDNTQERLKRLEDPFSMYRCHTIMNCTKTCPKSLNPGR 262
Query: 295 AIAEIKKLLSGLVKKDKPGLDTAA 318
AI E+KKL+SG+ +K KP L A
Sbjct: 263 AIGELKKLVSGISQKPKPDLSGVA 286
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 71/90 (78%), Gaps = 9/90 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI KID + +KIYPLP
Sbjct: 77 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGRNTLACICKIDNPGQSTKIYPLP 136
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYVVKDLVP QYKSIQ PW
Sbjct: 137 HMYVVKDLVP----VSGQYKSIQ-----PW 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 30/136 (22%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN EK G +Q Y +++ D L ++K DP +R R+C +
Sbjct: 51 YRWNPEKK-GDKPRLQTYEVDLNACGPMVLDALIKIKNEVDPTLTFR--------RSCRE 101
Query: 289 GLNPGRAI-AEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ + + L+ + K D PG T KIYPLPHMYVVKDLVP
Sbjct: 102 GICGSCAMNIDGRNTLACICKIDNPGQST-------------KIYPLPHMYVVKDLVP-- 146
Query: 348 NNFYAQYKSIQPWLPR 363
QYKSIQPWL +
Sbjct: 147 --VSGQYKSIQPWLQK 160
>gi|19528373|gb|AAL90301.1| RE03249p [Drosophila melanogaster]
Length = 437
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/253 (54%), Positives = 159/253 (62%), Gaps = 54/253 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------------------- 149
K + KTF IYRW KP ++P Q Y+VDL
Sbjct: 183 KKQRLKTFEIYRW---KPGDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSCR 239
Query: 150 --------------------NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQ
Sbjct: 240 EGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQ 299
Query: 189 PWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
PWLQR K G AQYLQS+DDR LDGLYECILCACC TSCPSYWWN KYLGPAVLM
Sbjct: 300 PWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVLM 359
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
QAYRW+IDSRDE T RL+ LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+LL GL
Sbjct: 360 QAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLVGL 419
Query: 307 VKKDKPGLDTAAL 319
KK KP L T AL
Sbjct: 420 KKKGKPQLKTDAL 432
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 216 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 275
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 276 PHLYVVRDLVPDMSQFYDQYRSIQ-----PW 301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 257 ACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQR 304
>gi|322709210|gb|EFZ00786.1| succinate dehydrogenase iron-sulfur protein [Metarhizium anisopliae
ARSEF 23]
Length = 314
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/266 (50%), Positives = 165/266 (62%), Gaps = 52/266 (19%)
Query: 91 KILGTLTAKNIRS---FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD 147
+ILG+ +R F S A+ S P EK + KTF IYRWNPD P EKP MQ Y +D
Sbjct: 10 RILGSSIRTAMRPGAVFTRSMASVSEAPHEKASNMKTFQIYRWNPDTPTEKPRMQSYTID 69
Query: 148 LN--------------NKID-----------------------------------ANDKV 158
LN N++D +
Sbjct: 70 LNKTGPMILDALVRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSSD 129
Query: 159 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
K+YPLPH YVVKDLVPD+ FY QYKSI+P+LQRD +Y QS +DRKKLDGLYE
Sbjct: 130 VKLYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTPAPDGKEYRQSKEDRKKLDGLYE 189
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE++A+R L++ S+YRCHT
Sbjct: 190 CILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERSAERRANLENNMSLYRCHT 249
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NCTR CPKGLNPG+AIAEIKK ++
Sbjct: 250 ILNCTRACPKGLNPGKAIAEIKKQMA 275
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A K+YPL
Sbjct: 76 MILDALVRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSSDVKLYPL 135
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 136 PHTYVVKDLVPDLTYFYKQYKSIKPYL 162
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I A K+YPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 117 ACLCRIPAESSSDVKLYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 164
>gi|367002416|ref|XP_003685942.1| hypothetical protein TPHA_0F00210 [Tetrapisispora phaffii CBS 4417]
gi|357524242|emb|CCE63508.1| hypothetical protein TPHA_0F00210 [Tetrapisispora phaffii CBS 4417]
Length = 265
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 164/258 (63%), Gaps = 52/258 (20%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----- 150
L + R+F S A A +P ++KTF IYRWNPDKP EKP +Q YKVDL++
Sbjct: 9 LLSTGRRAF--STTAKMATKQHEP-RFKTFKIYRWNPDKPTEKPRLQSYKVDLDDCGPMV 65
Query: 151 -------------------------------------------KIDA-NDKVSKIYPLPH 166
KID N K K+YPLPH
Sbjct: 66 LDALLKIKNEQDSTLTLRRSCREGICGSCAMNIGGRNTLACICKIDQDNSKELKVYPLPH 125
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
MYVVKDLVPD+ +FY QYKSIQP+LQR + LQS+ DRKKLDGLYECILCACCS
Sbjct: 126 MYVVKDLVPDLTHFYKQYKSIQPFLQRKTFPADGKENLQSIADRKKLDGLYECILCACCS 185
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWN E+YLGPAVLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNCT+TC
Sbjct: 186 TSCPSYWWNQEEYLGPAVLMQAYRWLIDSRDQASHKRKEMLQNSMSLYRCHTIMNCTKTC 245
Query: 287 PKGLNPGRAIAEIKKLLS 304
PKGLNPG+AIAEIKK L+
Sbjct: 246 PKGLNPGKAIAEIKKSLA 263
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLACI KID N K K+YPL
Sbjct: 64 MVLDALLKIKNEQDSTLTLRRSCREGICGSCAMNIGGRNTLACICKIDQDNSKELKVYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ +FY QYKSIQ L
Sbjct: 124 PHMYVVKDLVPDLTHFYKQYKSIQPFL 150
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID N K K+YPLPHMYVVKDLVPD+ +FY QYKSIQP+L R
Sbjct: 105 ACICKIDQDNSKELKVYPLPHMYVVKDLVPDLTHFYKQYKSIQPFLQR 152
>gi|346321126|gb|EGX90726.1| succinate dehydrogenase iron-sulfur protein [Cordyceps militaris
CM01]
Length = 277
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 170/273 (62%), Gaps = 55/273 (20%)
Query: 84 RHLGGPWKILGTLTAKNIR---SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
RH ++LGT +R +F S A+ S V +KP + KTF IYRWNPD P EKP
Sbjct: 5 RHSAA--RVLGTARTSALRPSFAFARSMASVSEVEEQKP-RLKTFQIYRWNPDTPTEKPR 61
Query: 141 MQEYKVDLNNK----IDANDKVS------------------------------------- 159
+Q Y +DLN +DA ++
Sbjct: 62 LQSYTIDLNKTGPMMLDAIIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRI 121
Query: 160 --------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+LQRD +Y QS +DRK
Sbjct: 122 PSESASDVKIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQRDTPAPDGKEYRQSKEDRK 181
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+TA+R L++
Sbjct: 182 KLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERTAERQANLENNM 241
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
S+YRCHTI+NCT+ CPKGLNPG+A+AEIKK +S
Sbjct: 242 SLYRCHTILNCTKACPKGLNPGKAVAEIKKQMS 274
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDA+I+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I + KIYPL
Sbjct: 75 MMLDAIIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPSESASDVKIYPL 134
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 135 PHTYVVKDLVPDLTHFYKQYKSIKPYL 161
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 130 KIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 163
>gi|89573819|gb|ABD77135.1| succinate dehydrogenase complex subunit B [Mesocricetus auratus]
Length = 247
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/245 (55%), Positives = 163/245 (66%), Gaps = 50/245 (20%)
Query: 98 AKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------- 149
A + L A + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 3 ATALGRVGLQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLD 62
Query: 150 ------NKIDAN-----------------------------------DKVSKIYPLPHMY 168
N++D+ +KVSKIYPLPHMY
Sbjct: 63 ALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLNKVSKIYPLPHMY 122
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
V+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCST
Sbjct: 123 VIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCST 182
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRTCP
Sbjct: 183 SCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCP 242
Query: 288 KGLNP 292
KGLNP
Sbjct: 243 KGLNP 247
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + +KVSKIYPL
Sbjct: 59 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLNKVSKIYPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 119 PHMYVIKDLVPDLSNFYAQYKSIEPYL 145
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 96 GNTLACTRRIDTDLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 147
>gi|326932228|ref|XP_003212222.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like isoform 2 [Meleagris
gallopavo]
Length = 223
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 146/163 (89%), Gaps = 2/163 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
KID + K++KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS
Sbjct: 57 TKKIDPDLSKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQS 116
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 117 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 176
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
L+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 177 LQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 219
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K++KIYPL
Sbjct: 14 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKITKIYPL 73
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 74 PHMYVVKDLVPDLSNFYAQYKSIEPYL 100
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K++KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 51 GNTLACTKKIDPDLSKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 102
>gi|119615235|gb|EAW94829.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_b [Homo sapiens]
Length = 223
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 147/161 (91%), Gaps = 2/161 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 59 RIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 118
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 119 EREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 178
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 179 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 219
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 98/146 (67%), Gaps = 23/146 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 14 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 73
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-------GPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L G + L ++ + + L A
Sbjct: 74 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCA 133
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK 134
S++ P+ Y WN DK
Sbjct: 134 CCSTSCPS-----------YWWNGDK 148
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 51 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 102
>gi|194892765|ref|XP_001977726.1| GG19200 [Drosophila erecta]
gi|190649375|gb|EDV46653.1| GG19200 [Drosophila erecta]
Length = 412
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/257 (54%), Positives = 162/257 (63%), Gaps = 55/257 (21%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------ 149
V A+KP + K+F IYRW KP ++P Q Y VDL
Sbjct: 155 VKAKKP-RMKSFEIYRW---KPGDQPQTQTYLVDLEQCGAMVLDALIKIKNEMDPTLTFR 210
Query: 150 ------------------------NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQY 184
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY
Sbjct: 211 RSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYEQY 270
Query: 185 KSIQPWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
+SIQPWLQR K G AQYLQS+DDR LDGLYECILCACC TSCPSYWWN KYLGP
Sbjct: 271 RSIQPWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGP 330
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AVLMQAYRW+IDSRDE T RL+ LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+L
Sbjct: 331 AVLMQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQL 390
Query: 303 LSGLVKKDKPGLDTAAL 319
L GL KK KP L T AL
Sbjct: 391 LVGLKKKGKPQLKTDAL 407
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 191 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 250
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 251 PHLYVVRDLVPDMSQFYEQYRSIQ-----PW 276
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 232 ACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYEQYRSIQPWLQR 279
>gi|410084377|ref|XP_003959765.1| hypothetical protein KAFR_0L00230 [Kazachstania africana CBS 2517]
gi|372466358|emb|CCF60630.1| hypothetical protein KAFR_0L00230 [Kazachstania africana CBS 2517]
Length = 267
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/258 (52%), Positives = 162/258 (62%), Gaps = 54/258 (20%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----- 150
+ + + + + + A S VP K KTF +YRWNPDKP EKP +Q Y+VDLN
Sbjct: 12 IARRGVATTESAMATHSTVP-----KMKTFKVYRWNPDKPAEKPHLQTYQVDLNECGPMV 66
Query: 151 -------------------------------------------KIDAN-DKVSKIYPLPH 166
KID N K KIYPLPH
Sbjct: 67 LDALLKIKNEQDPTLTFRRSCREGICGSCAMNIEGRNTLACLCKIDTNVSKQEKIYPLPH 126
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
M++VKDLVPD+ NFY QYKSI+P+LQR + QS++DRKKLDGLYECILCACCS
Sbjct: 127 MFIVKDLVPDLTNFYQQYKSIKPYLQRSSFPADGKEVPQSIEDRKKLDGLYECILCACCS 186
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWN E+YLGPAVL+QAYRW+IDSRD+ T R + L++ S+YRCHTIMNCTRTC
Sbjct: 187 TSCPSYWWNQEEYLGPAVLLQAYRWLIDSRDQATRQRKDMLQNSMSLYRCHTIMNCTRTC 246
Query: 287 PKGLNPGRAIAEIKKLLS 304
PKGLNPG AIAEIKK L+
Sbjct: 247 PKGLNPGLAIAEIKKKLA 264
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+ KID N K KIYPL
Sbjct: 65 MVLDALLKIKNEQDPTLTFRRSCREGICGSCAMNIEGRNTLACLCKIDTNVSKQEKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM++VKDLVPD+ NFY QYKSI+ +L
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIKPYL 151
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID N K KIYPLPHM++VKDLVPD+ NFY QYKSI+P+L RS
Sbjct: 106 ACLCKIDTNVSKQEKIYPLPHMFIVKDLVPDLTNFYQQYKSIKPYLQRS 154
>gi|444320123|ref|XP_004180718.1| hypothetical protein TBLA_0E01400 [Tetrapisispora blattae CBS 6284]
gi|387513761|emb|CCH61199.1| hypothetical protein TBLA_0E01400 [Tetrapisispora blattae CBS 6284]
Length = 275
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 157/248 (63%), Gaps = 54/248 (21%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L+ AA SA P ++KTF IYRWNPD P EKP +QE+KVDLN
Sbjct: 31 LATAAGSASP-----RFKTFKIYRWNPDTPSEKPFLQEFKVDLNECGPMVLDALLKIKNE 85
Query: 151 ---------------------------------KIDAND-KVSKIYPLPHMYVVKDLVPD 176
KID N+ K KIYPLPHMY+VKDLVPD
Sbjct: 86 QDPTLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKQLKIYPLPHMYIVKDLVPD 145
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ NFY QYKSI+P+L RDK + LQS++DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 146 LTNFYKQYKSIKPYLHRDKFPEDGKEILQSIEDRKKLDGLYECILCACCSTSCPSYWWNN 205
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPAVLMQAYRW+ DSRD R L + S+YRCHTIMNCTRTCPKGLNPG+AI
Sbjct: 206 EEYLGPAVLMQAYRWLADSRDTANDMRKTMLNNSMSLYRCHTIMNCTRTCPKGLNPGKAI 265
Query: 297 AEIKKLLS 304
A IK L+
Sbjct: 266 AHIKSSLA 273
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSCAMNIGG NTLAC+ KID N+ K KIYPL
Sbjct: 74 MVLDALLKIKNEQDPTLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKQLKIYPL 133
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ NFY QYKSI+ +L
Sbjct: 134 PHMYIVKDLVPDLTNFYKQYKSIKPYL 160
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID N+ K KIYPLPHMY+VKDLVPD+ NFY QYKSI+P+L R
Sbjct: 115 ACLCKIDQNESKQLKIYPLPHMYIVKDLVPDLTNFYKQYKSIKPYLHR 162
>gi|46122465|ref|XP_385786.1| hypothetical protein FG05610.1 [Gibberella zeae PH-1]
Length = 260
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 161/229 (70%), Gaps = 32/229 (13%)
Query: 108 AAASSAVPAEKP-AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS--- 159
+ AS + PA++P +K K+F IYRWNPD P EKP +Q Y +DLN +DA ++
Sbjct: 29 SMASVSEPAKEPESKLKSFQIYRWNPDTPSEKPRLQTYTLDLNKTGPMILDALIRIKNEL 88
Query: 160 ------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+LQRD
Sbjct: 89 DPTLTFRRSCQYPGRIPTEAASDVKIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQRDT 148
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+Y Q+ +DR+KLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DS
Sbjct: 149 PAEDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADS 208
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
RD++TA+R L++ S+YRCHTI+NCTR CPKGLNPG+AIAEIKK ++
Sbjct: 209 RDQRTAERKQNLENSMSLYRCHTILNCTRACPKGLNPGKAIAEIKKQMA 257
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 17/86 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALI+IKNE+DPTLTFRRSC+ G + T A A+D KIYPLP
Sbjct: 76 MILDALIRIKNELDPTLTFRRSCQYP---------GRIPTEA------ASD--VKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 119 HTYVVKDLVPDLTHFYKQYKSIKPYL 144
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 113 KIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 146
>gi|401624765|gb|EJS42812.1| sdh2p [Saccharomyces arboricola H-6]
Length = 266
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 165/265 (62%), Gaps = 53/265 (20%)
Query: 92 ILGTLTAKNIRSF---QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
+L L KN S + A A++A P + KTF +YRWNPD+P KP +Q Y+VDL
Sbjct: 1 MLNVLLRKNAFSLVTRKGMATAATAASKHTP-RLKTFKVYRWNPDEPSAKPHLQSYQVDL 59
Query: 149 NN------------------------------------------------KIDAND-KVS 159
N+ KID N+ K
Sbjct: 60 NDCGPMVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQL 119
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM++VKDLVPD+ NFY QYKSIQP+LQR + LQS++DRKKLDGLYEC
Sbjct: 120 KIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSYPKDGTEVLQSIEDRKKLDGLYEC 179
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST+CPSYWWN E+YLGPAVLMQAYRW++DSRD+ T R L + S+YRCHTI
Sbjct: 180 ILCACCSTACPSYWWNQEQYLGPAVLMQAYRWLVDSRDQATKARKAMLNNSMSLYRCHTI 239
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
MNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 240 MNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 106/169 (62%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K KIYPL
Sbjct: 65 MVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQLKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-GPWKILGTLTAKNIRSFQ---------LSAA 109
PHM++VKDLVPD+ NFY QYKSIQ +L + GT ++I + L A
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSYPKDGTEVLQSIEDRKKLDGLYECILCAC 184
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S+A P+ +Y A+ YRW D D+ + K LNN +
Sbjct: 185 CSTACPSYWWNQEQYLGPAVLMQAYRWLVDSRDQ--ATKARKAMLNNSM 231
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 106 ACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
>gi|195400701|ref|XP_002058954.1| GJ15311 [Drosophila virilis]
gi|194141606|gb|EDW58023.1| GJ15311 [Drosophila virilis]
Length = 382
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/266 (51%), Positives = 164/266 (61%), Gaps = 54/266 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------------- 149
+A + P K + KTF IYRW KP ++P MQ+YK+DLN
Sbjct: 117 AAPKETTKPKPKEERMKTFEIYRW---KPGDEPKMQKYKLDLNKCGAMVLDALIKIKSEM 173
Query: 150 -------------------------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDM 177
ID N + KIYPLPH+YV +DLVPDM
Sbjct: 174 DATLTFRRSCREGICGSCAMNIDGINTLACIQAIDTNVGRPCKIYPLPHLYVKRDLVPDM 233
Query: 178 NNFYAQYKSIQPWLQRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
+ FY QY+SI+PWLQR N +G AQYLQSL+DR +LDGLYECILCACC T+CPSYWWN
Sbjct: 234 SQFYDQYRSIEPWLQRKDLNREMGKAQYLQSLEDRNRLDGLYECILCACCQTACPSYWWN 293
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
EKYLGPAVLMQAYRW+IDSRDE T RL QL DP+ +YRCHTI+NCT TCPK LNP A
Sbjct: 294 SEKYLGPAVLMQAYRWVIDSRDEATEHRLCQLMDPWKLYRCHTILNCTNTCPKNLNPAMA 353
Query: 296 IAEIKKLLSGLVKKDKPGLDTAALHK 321
I E+K+LL+G+ K KP L T L +
Sbjct: 354 IMELKQLLAGMKNKPKPKLQTDQLFQ 379
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 97/156 (62%), Gaps = 19/156 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIK+EMD TLTFRRSCREGICGSCAMNI G+NTLACI ID N + KIYPL
Sbjct: 161 MVLDALIKIKSEMDATLTFRRSCREGICGSCAMNIDGINTLACIQAIDTNVGRPCKIYPL 220
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG--------GPWKILGTLTAKN----IRSFQLS 107
PH+YV +DLVPDM+ FY QY+SI+ L G + L +L +N + L
Sbjct: 221 PHLYVKRDLVPDMSQFYDQYRSIEPWLQRKDLNREMGKAQYLQSLEDRNRLDGLYECILC 280
Query: 108 AAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A +A P+ KY A+ YRW D DE
Sbjct: 281 ACCQTACPSYWWNSEKYLGPAVLMQAYRWVIDSRDE 316
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + ID N + KIYPLPH+YV +DLVPDM+ FY QY+SI+PWL R
Sbjct: 197 GINTLACIQAIDTNVGRPCKIYPLPHLYVKRDLVPDMSQFYDQYRSIEPWLQR 249
>gi|209954761|dbj|BAG80571.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae]
gi|209954763|dbj|BAG80572.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae]
Length = 278
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 165/254 (64%), Gaps = 51/254 (20%)
Query: 102 RSF-QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
RS+ + AAA P+E P + KTF IYRWNPD+P EKP MQ Y +DLN
Sbjct: 25 RSYATVDAAAQDPNPSETP-RTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALI 83
Query: 150 ---NKIDAN-----------------------------------DKVSKIYPLPHMYVVK 171
N++D K S+IYPLPH YVVK
Sbjct: 84 RIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVK 143
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ FY QYKSI+P+LQR+ + +Y QS ++RKKLDGLYECILCACCSTSCPS
Sbjct: 144 DLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPS 203
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN E+YLGPA+L+Q+YRW+ DSRDEKTA+R + L + SVYRC+TI+NC+RTCPKGLN
Sbjct: 204 YWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALDNSMSVYRCYTILNCSRTCPKGLN 263
Query: 292 PGRAIAEIKKLLSG 305
P RAIAEIKKL++
Sbjct: 264 PARAIAEIKKLMAA 277
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 77 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN----------IRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L K L + + L A
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCAC 196
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 197 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 240
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 113 GVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 165
>gi|255714899|ref|XP_002553731.1| KLTH0E05742p [Lachancea thermotolerans]
gi|238935113|emb|CAR23294.1| KLTH0E05742p [Lachancea thermotolerans CBS 6340]
Length = 263
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/262 (52%), Positives = 163/262 (62%), Gaps = 51/262 (19%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN- 150
++ + +NI ++ V E + KTF IYRWNPD P +KP +QE+KVDLN
Sbjct: 2 MMSGILKRNIAGVVARRGLATEVVQE--PRLKTFKIYRWNPDHPADKPKLQEFKVDLNKC 59
Query: 151 -----------------------------------------------KIDAN-DKVSKIY 162
KID + K +KIY
Sbjct: 60 GPMVLDALLKIKDEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCKIDTDVSKQTKIY 119
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILC 222
PLPHMY+VKDLVPD+ FY QYKS+QP+LQR K + LQS++DRKKLDGLYECILC
Sbjct: 120 PLPHMYIVKDLVPDLTQFYKQYKSVQPYLQRSKMPEDGKENLQSIEDRKKLDGLYECILC 179
Query: 223 ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNC 282
ACCSTSCPSYWWN E+YLGPAVLMQAYRW+IDSRDE + R L++ S+YRCHTIMNC
Sbjct: 180 ACCSTSCPSYWWNQEQYLGPAVLMQAYRWLIDSRDEASKFRKEMLQNSMSLYRCHTIMNC 239
Query: 283 TRTCPKGLNPGRAIAEIKKLLS 304
TRTCPKGLNPG AIAEIKK L+
Sbjct: 240 TRTCPKGLNPGYAIAEIKKALA 261
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIK+E D TLT RRSCREGICGSCAMNIGG NTLAC+ KID + K +KIYPL
Sbjct: 62 MVLDALLKIKDEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCKIDTDVSKQTKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKS+Q +L
Sbjct: 122 PHMYIVKDLVPDLTQFYKQYKSVQPYL 148
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID + K +KIYPLPHMY+VKDLVPD+ FY QYKS+QP+L RS
Sbjct: 103 ACLCKIDTDVSKQTKIYPLPHMYIVKDLVPDLTQFYKQYKSVQPYLQRS 151
>gi|388580180|gb|EIM20497.1| succinate dehydrogenase and fumarate r [Wallemia sebi CBS 633.66]
Length = 255
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 161/254 (63%), Gaps = 51/254 (20%)
Query: 101 IRSFQLSAAASSAVP-AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------- 150
+RSF S + A P KP K F IYRWNPDKP EKP MQ Y VDLN
Sbjct: 1 MRSFSTSTRRALATPVGAKPPHMKKFQIYRWNPDKPAEKPRMQTYDVDLNACGPMVLDAL 60
Query: 151 ---------------------------------------KIDAND-KVSKIYPLPHMYVV 170
+ID N+ K SKIYPLPHMY+V
Sbjct: 61 LKIKNEADPTLTFRRSCREGICGSCAMNIEGQNTLACLCRIDRNENKASKIYPLPHMYIV 120
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
KDLVPDM FY QYKSI+P+LQ D G ++ QS ++RKKLDG+YECILCACCSTSCP
Sbjct: 121 KDLVPDMTQFYKQYKSIEPYLQSDNVPDG-VEHRQSPEERKKLDGMYECILCACCSTSCP 179
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN ++YLGPAVLMQAYRWI DSRD K A+R +L++ FS+YRCHTI NCTRTCPKGL
Sbjct: 180 SYWWNQDEYLGPAVLMQAYRWIADSRDSKAAERKEKLENTFSLYRCHTIFNCTRTCPKGL 239
Query: 291 NPGRAIAEIKKLLS 304
NP +AIAE+KK ++
Sbjct: 240 NPAKAIAEMKKEMA 253
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N+ K SKIYPL
Sbjct: 55 MVLDALLKIKNEADPTLTFRRSCREGICGSCAMNIEGQNTLACLCRIDRNENKASKIYPL 114
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPDM FY QYKSI+ +L
Sbjct: 115 PHMYIVKDLVPDMTQFYKQYKSIEPYL 141
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 71/137 (51%), Gaps = 31/137 (22%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN +K PA MQ Y +++ D L ++K DP +R R+C
Sbjct: 29 YRWNPDK---PAEKPRMQTYDVDLNACGPMVLDALLKIKNEADPTLTFR--------RSC 77
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLV 344
+G+ G + G +T A L +ID N+ K SKIYPLPHMY+VKDLV
Sbjct: 78 REGI-------------CGSCAMNIEGQNTLACLCRIDRNENKASKIYPLPHMYIVKDLV 124
Query: 345 PDMNNFYAQYKSIQPWL 361
PDM FY QYKSI+P+L
Sbjct: 125 PDMTQFYKQYKSIEPYL 141
>gi|209954767|dbj|BAG80574.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae]
Length = 278
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 165/254 (64%), Gaps = 51/254 (20%)
Query: 102 RSF-QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
RS+ + AAA P+E P + KTF IYRWNPD+P EKP MQ Y +DLN
Sbjct: 25 RSYATVDAAAQDPNPSETP-RTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALI 83
Query: 150 ---NKIDAN-----------------------------------DKVSKIYPLPHMYVVK 171
N++D K S+IYPLPH YVVK
Sbjct: 84 RIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVK 143
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ FY QYKSI+P+LQR+ + +Y QS ++RKKLDGLYECILCACCSTSCPS
Sbjct: 144 DLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPS 203
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN E+YLGPA+L+Q+YRW+ DSRDEKTA+R + L + SVYRC+TI+NC+RTCPKGLN
Sbjct: 204 YWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALDNSMSVYRCNTILNCSRTCPKGLN 263
Query: 292 PGRAIAEIKKLLSG 305
P RAIAEIKKL++
Sbjct: 264 PARAIAEIKKLMAA 277
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 77 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN----------IRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L K L + + L A
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCAC 196
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 197 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 240
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 113 GVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 165
>gi|89573825|gb|ABD77138.1| succinate dehydrogenase complex subunit B [Oryctolagus cuniculus]
Length = 247
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/251 (54%), Positives = 165/251 (65%), Gaps = 58/251 (23%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + + R Q +AA + + K FAIYRW+PDK +KP MQ Y+VDL
Sbjct: 5 PATALGGVCLQACREAQTAAATAPRI--------KKFAIYRWDPDKAGDKPRMQTYEVDL 56
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+ID+ DKVS
Sbjct: 57 NKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVS 116
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYE
Sbjct: 117 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYE 176
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 177 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 236
Query: 279 IMNCTRTCPKG 289
IMNCTRTCPKG
Sbjct: 237 IMNCTRTCPKG 247
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 62 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCA 181
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 182 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 220
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 150
>gi|149024459|gb|EDL80956.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
(predicted), isoform CRA_f [Rattus norvegicus]
Length = 210
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/163 (74%), Positives = 146/163 (89%), Gaps = 2/163 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS
Sbjct: 44 TRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQS 103
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL +
Sbjct: 104 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAK 163
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 164 LQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 206
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 102/155 (65%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 1 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 60
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-------GPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L G + L ++ + + L A
Sbjct: 61 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 120
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY A+ YRW D DE
Sbjct: 121 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDE 155
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 38 GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 89
>gi|89573831|gb|ABD77141.1| succinate dehydrogenase complex subunit B [Aotus trivirgatus]
Length = 249
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 165/248 (66%), Gaps = 58/248 (23%)
Query: 102 RSFQLSAAASSAVPAEKPA--------KYKTFAIYRWNPDKPDEKPTMQEYKVDLN---- 149
R F +A + + A + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 2 RRFPATAVGGACLQACRGAQTAAAAAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGP 61
Query: 150 ----------NKIDAN-----------------------------------DKVSKIYPL 164
N+ID+ +KVSKIYPL
Sbjct: 62 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 121
Query: 165 PHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCA 223
PHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCA
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCA 181
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT
Sbjct: 182 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCT 241
Query: 284 RTCPKGLN 291
RTCPKGLN
Sbjct: 242 RTCPKGLN 249
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 62 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEDREKLDGLYECILCA 181
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 182 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 220
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 150
>gi|241958672|ref|XP_002422055.1| succinate dehydrogenase, iron-sulfur protein subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
gi|223645400|emb|CAX40056.1| succinate dehydrogenase, iron-sulfur protein subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
Length = 263
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 162/252 (64%), Gaps = 49/252 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
++ Q S + + AEK + K F IYRWNPD P+ +P MQ Y+VDLN
Sbjct: 10 KAVQFSVRSLATAAAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLK 69
Query: 151 -------------------------------------KIDAND-KVSKIYPLPHMYVVKD 172
+ID ++ K K+YPLPHM+VV+D
Sbjct: 70 IKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVRD 129
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ +FY QYKSI+P+LQRD + LQS++DR KLDGLYECILCACCSTSCPSY
Sbjct: 130 LVPDLTHFYKQYKSIEPYLQRDSNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSY 189
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPAVLMQAYRW+IDSRD+ TA+R L++ S+YRCHTIMNC RTCPKGLNP
Sbjct: 190 WWNQQQYLGPAVLMQAYRWLIDSRDQATANRKAMLQNSMSLYRCHTIMNCARTCPKGLNP 249
Query: 293 GRAIAEIKKLLS 304
G+AIAEIKK L+
Sbjct: 250 GKAIAEIKKQLA 261
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ +ID ++ K K+YPL
Sbjct: 62 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 122 PHMFVVRDLVPDLTHFYKQYKSIEPYL 148
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 103 ACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQR 150
>gi|328773437|gb|EGF83474.1| hypothetical protein BATDEDRAFT_18595 [Batrachochytrium
dendrobatidis JAM81]
Length = 279
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 161/248 (64%), Gaps = 49/248 (19%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------- 149
QL+ A+SA P KP K+F IYRWNP+K +EKP +Q Y++DLN
Sbjct: 30 QLAQEATSANPLAKPVLMKSFEIYRWNPEKSEEKPRIQTYQIDLNQCGPMTLDALIKIKN 89
Query: 150 ---------------------------------NKIDANDKVSKIYPLPHMYVVKDLVPD 176
++I+ + K KI+PLPH YVVKDLVPD
Sbjct: 90 EIDPTLTFRRSCREGICGSCAMNINGGNTLACLSRIERSSKPLKIFPLPHTYVVKDLVPD 149
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ NFY QYKSI+P+L + K + LQ++ DR KLDGLYECILCACCSTSCPSYWWN
Sbjct: 150 LTNFYKQYKSIEPYL-KQKTAPPERENLQTIADRAKLDGLYECILCACCSTSCPSYWWNS 208
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
+KYLGPAVLMQAYRW+IDSRD+ A+R L+DPFS+YRCHTIMNC RTCPKGLNPG AI
Sbjct: 209 DKYLGPAVLMQAYRWMIDSRDQYGAERRAALQDPFSLYRCHTIMNCARTCPKGLNPGLAI 268
Query: 297 AEIKKLLS 304
AEIKK ++
Sbjct: 269 AEIKKQMA 276
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 75/86 (87%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+S+I+ + K KI+PLP
Sbjct: 79 MTLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLSRIERSSKPLKIFPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YVVKDLVPD+ NFY QYKSI+ +L
Sbjct: 139 HTYVVKDLVPDLTNFYKQYKSIEPYL 164
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 24/133 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN EK +Q Y+ ++ T D L ++K DP +R R+C +
Sbjct: 53 YRWNPEKS-EEKPRIQTYQIDLNQCGPMTLDALIKIKNEIDPTLTFR--------RSCRE 103
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ A+ ++G G A L +I+ + K KI+PLPH YVVKDLVPD+
Sbjct: 104 GICGSCAMN-----ING-------GNTLACLSRIERSSKPLKIFPLPHTYVVKDLVPDLT 151
Query: 349 NFYAQYKSIQPWL 361
NFY QYKSI+P+L
Sbjct: 152 NFYKQYKSIEPYL 164
>gi|365989224|ref|XP_003671442.1| hypothetical protein NDAI_0H00250 [Naumovozyma dairenensis CBS 421]
gi|343770215|emb|CCD26199.1| hypothetical protein NDAI_0H00250 [Naumovozyma dairenensis CBS 421]
Length = 282
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 155/233 (66%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYRWNPDKP EKP +Q +++DLNN
Sbjct: 48 RLKTFKIYRWNPDKPVEKPHLQSFQIDLNNCGPMVLDALLKIKDEQDSSLTFRRSCREGI 107
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K KIYPLPHMYVVKDLVPD+ NFY QYKSIQP+L
Sbjct: 108 CGSCAMNIGGRNTLACLCKIDQNESKDLKIYPLPHMYVVKDLVPDLTNFYQQYKSIQPYL 167
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW
Sbjct: 168 QRSEFPKDGKEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRW 227
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRD+ T R L++ S+YRCHTIMNCT+TCPKGLNPG AIA+IKK L+
Sbjct: 228 LIDSRDQATKARKTMLENSMSLYRCHTIMNCTKTCPKGLNPGFAIAKIKKSLA 280
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D +LTFRRSCREGICGSCAMNIGG NTLAC+ KID N+ K KIYPL
Sbjct: 81 MVLDALLKIKDEQDSSLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKDLKIYPL 140
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKSIQ +L
Sbjct: 141 PHMYVVKDLVPDLTNFYQQYKSIQPYL 167
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID N+ K KIYPLPHMYVVKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 122 ACLCKIDQNESKDLKIYPLPHMYVVKDLVPDLTNFYQQYKSIQPYLQRS 170
>gi|89573823|gb|ABD77137.1| succinate dehydrogenase complex subunit B [Lepus europaeus]
Length = 246
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/251 (53%), Positives = 165/251 (65%), Gaps = 58/251 (23%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 4 PATALGGVCLQACREAQTAAATAPRI--------KKFAIYRWDPDKAGDKPRMQTYEIDL 55
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+ID+ DKVS
Sbjct: 56 NKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVS 115
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS+++R+KLDGLYE
Sbjct: 116 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYE 175
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 176 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 235
Query: 279 IMNCTRTCPKG 289
IMNCTRTCPKG
Sbjct: 236 IMNCTRTCPKG 246
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 61 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 120
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 121 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCA 180
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 181 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 219
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 98 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 149
>gi|326475435|gb|EGD99444.1| succinate dehydrogenase iron-sulfur protein [Trichophyton tonsurans
CBS 112818]
Length = 284
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/282 (50%), Positives = 169/282 (59%), Gaps = 55/282 (19%)
Query: 77 AQYKSIQRHLGGPWKILGTLTAK----NIRSFQLSAAASSAVPAEKPA-KYKTFAIYRWN 131
A +S R L G ++ + A + + S ASSA P PA K KTF IYRWN
Sbjct: 2 ASLRSTSRLLRGSSALMRPVMASRSYATVETNAKSTEASSA-PTSAPAPKMKTFKIYRWN 60
Query: 132 PDKPDEKPTMQEYKVDLNNK----IDA--------------------------------- 154
PD+P KP MQ Y +DLN +DA
Sbjct: 61 PDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGV 120
Query: 155 ------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQ 202
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+LQRD + +
Sbjct: 121 NTLACLCRTPTDTTKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTPSPDGRE 180
Query: 203 YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTAD 262
QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDE+T
Sbjct: 181 NRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDERTEQ 240
Query: 263 RLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIKK++S
Sbjct: 241 RKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMS 282
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ + + K ++IYPL
Sbjct: 83 MVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 143 PHTYVVKDLVPDMTQFYKQYKSIKPYL 169
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 135 KETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 171
>gi|148681387|gb|EDL13334.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_d [Mus musculus]
gi|148681390|gb|EDL13337.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_d [Mus musculus]
Length = 210
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/163 (74%), Positives = 146/163 (89%), Gaps = 2/163 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS
Sbjct: 44 TRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQS 103
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +
Sbjct: 104 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAK 163
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
L+DPFSVYRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 164 LQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 206
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 1 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 60
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 61 PHMYVIKDLVPDLSNFYAQYKSIEPYL 87
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 38 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 89
>gi|326477471|gb|EGE01481.1| succinate dehydrogenase iron-sulfur subunit [Trichophyton equinum
CBS 127.97]
Length = 284
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/282 (50%), Positives = 169/282 (59%), Gaps = 55/282 (19%)
Query: 77 AQYKSIQRHLGGPWKILGTLTAK----NIRSFQLSAAASSAVPAEKPA-KYKTFAIYRWN 131
A +S R L G ++ + A + + S ASSA P PA K KTF IYRWN
Sbjct: 2 ASLRSTSRLLRGSSALMRPVMASRSYATVETNAKSTEASSA-PTSAPAPKMKTFKIYRWN 60
Query: 132 PDKPDEKPTMQEYKVDLNNK----IDA--------------------------------- 154
PD+P KP MQ Y +DLN +DA
Sbjct: 61 PDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGV 120
Query: 155 ------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQ 202
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+LQRD + +
Sbjct: 121 NTLACLCRTPTDTTKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTPSPDGRE 180
Query: 203 YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTAD 262
QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDE+T
Sbjct: 181 NRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDERTEQ 240
Query: 263 RLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIKK++S
Sbjct: 241 RKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMS 282
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ + + K ++IYPL
Sbjct: 83 MVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 143 PHTYVVKDLVPDMTQFYKQYKSIKPYL 169
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 135 KETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 171
>gi|254572495|ref|XP_002493357.1| Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p,
Sdh2p, Sdh3p, Sdh4p) [Komagataella pastoris GS115]
gi|238033155|emb|CAY71178.1| Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p,
Sdh2p, Sdh3p, Sdh4p) [Komagataella pastoris GS115]
Length = 267
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/248 (52%), Positives = 158/248 (63%), Gaps = 49/248 (19%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
LS A ++ + K+F +YRW+PD P+ KP MQEYK+DLN
Sbjct: 18 LSVVRGLATVSQNQPRLKSFKVYRWSPDTPEIKPHMQEYKIDLNECGPMVLDALLKIKNE 77
Query: 151 ---------------------------------KIDANDKVS-KIYPLPHMYVVKDLVPD 176
KID N+ KIYPLPHM+VV+DLVPD
Sbjct: 78 QDATLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESTELKIYPLPHMFVVRDLVPD 137
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ +FY QYKSIQP+LQRD + LQS++DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 138 LTHFYKQYKSIQPFLQRDSVPSDGKENLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQ 197
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
++YLGPAVLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNC RTCPKGLNPG+AI
Sbjct: 198 QEYLGPAVLMQAYRWLIDSRDQASVARKEMLQNSMSLYRCHTIMNCARTCPKGLNPGKAI 257
Query: 297 AEIKKLLS 304
AEIKK L+
Sbjct: 258 AEIKKQLA 265
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ KID N+ KIYPL
Sbjct: 66 MVLDALLKIKNEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESTELKIYPL 125
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ L
Sbjct: 126 PHMFVVRDLVPDLTHFYKQYKSIQPFL 152
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID N+ KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 107 ACLCKIDQNESTELKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPFLQR 154
>gi|195481535|ref|XP_002101683.1| GE17763 [Drosophila yakuba]
gi|194189207|gb|EDX02791.1| GE17763 [Drosophila yakuba]
Length = 425
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 162/255 (63%), Gaps = 55/255 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------------------- 149
A+KP + KTF IYRW KP ++P Q Y VDL
Sbjct: 170 AKKP-RMKTFEIYRW---KPGDQPQTQTYSVDLEQCGAMVLDALIKIKTELDPTLTFRRS 225
Query: 150 ----------------------NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+S
Sbjct: 226 CREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRS 285
Query: 187 IQPWLQRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
IQPWLQR K G+AQYLQS+DDR LDGLYECILCACC T+CPSYWWN KYLGPAV
Sbjct: 286 IQPWLQRKDLKREAGSAQYLQSVDDRLVLDGLYECILCACCQTACPSYWWNSNKYLGPAV 345
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
LMQAYRW+IDSRDE T RL+ LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+LL
Sbjct: 346 LMQAYRWVIDSRDEATEQRLDFLKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLV 405
Query: 305 GLVKKDKPGLDTAAL 319
GL KK KP + T AL
Sbjct: 406 GLKKKGKPQIKTDAL 420
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIK E+DPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 204 MVLDALIKIKTELDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 263
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 264 PHLYVVRDLVPDMSQFYDQYRSIQ-----PW 289
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 245 ACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQR 292
>gi|406603673|emb|CCH44826.1| succinate dehydrogenase complex, subunit B [Wickerhamomyces
ciferrii]
Length = 262
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 165/255 (64%), Gaps = 49/255 (19%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------- 150
++I S + + A EKP+ K F IYRW+PDKP EKP +QEY+VDLN+
Sbjct: 6 RSIISLRSPLSRGLATTTEKPSLIKKFKIYRWSPDKPSEKPHLQEYQVDLNDCGPMILDA 65
Query: 151 ----------------------------------------KIDAN-DKVSKIYPLPHMYV 169
+ID + K +KIYPLPHM+V
Sbjct: 66 IIKIKNEQDPTLTFRRSCREGICGSCAMNIGGRNTLACLCRIDRDVKKDTKIYPLPHMFV 125
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
V+DLVPD+ +FY QYKSIQP+LQRD + LQS++DRKKLDGLYECILCACCSTSC
Sbjct: 126 VRDLVPDLTHFYKQYKSIQPYLQRDSIPEDGKENLQSVEDRKKLDGLYECILCACCSTSC 185
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWN ++YLGPAVLMQAYRW+IDSRD+ R L++ S+YRCHTI+NCTRTCPKG
Sbjct: 186 PSYWWNQQEYLGPAVLMQAYRWLIDSRDQAGRVRREMLENSMSMYRCHTILNCTRTCPKG 245
Query: 290 LNPGRAIAEIKKLLS 304
LNPG+AIAE+KK L+
Sbjct: 246 LNPGKAIAEVKKQLA 260
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDA+IKIKNE DPTLTFRRSCREGICGSCAMNIGG NTLAC+ +ID + K +KIYPL
Sbjct: 61 MILDAIIKIKNEQDPTLTFRRSCREGICGSCAMNIGGRNTLACLCRIDRDVKKDTKIYPL 120
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ +L
Sbjct: 121 PHMFVVRDLVPDLTHFYKQYKSIQPYL 147
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +ID + K +KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 102 ACLCRIDRDVKKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQR 149
>gi|365759559|gb|EHN01341.1| Sdh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 266
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 153/233 (65%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYRWNPD+P KP +Q Y+VDLN+
Sbjct: 32 RMKTFKIYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDATLTFRRSCREGI 91
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K SKIYPLPHM++VKDLVPD+ NFY QYKSIQP+L
Sbjct: 92 CGSCAMNIGGRNTLACICKIDQNESKQSKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + LQS++DRKKLDGLYECILCACCST+CPSYWWN E+YLGPAVLMQAYRW
Sbjct: 152 QRSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTACPSYWWNQEQYLGPAVLMQAYRW 211
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
++DSRD+ T R L + S+YRCHTIMNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 212 LVDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 107/169 (63%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K SKIYPL
Sbjct: 65 MVLDALLKIKDEQDATLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQSKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-GPWKILGTLTAKNIRSFQ---------LSAA 109
PHM++VKDLVPD+ NFY QYKSIQ +L + GT ++I + L A
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSFPKDGTEVLQSIEDRKKLDGLYECILCAC 184
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S+A P+ +Y A+ YRW D D+ + K LNN +
Sbjct: 185 CSTACPSYWWNQEQYLGPAVLMQAYRWLVDSRDQ--ATKTRKAMLNNSM 231
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + KID N+ K SKIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 106 ACICKIDQNESKQSKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
>gi|268529074|ref|XP_002629663.1| C. briggsae CBR-SDHB-1 protein [Caenorhabditis briggsae]
Length = 302
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 167/266 (62%), Gaps = 52/266 (19%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------- 150
F A A++A P + + KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 39 FSKIARAAAAQPKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIK 98
Query: 151 -----------------------------------KIDAN-DKVSKIYPLPHMYVVKDLV 174
KIDA+ K +KIYPLPHM+VVKDLV
Sbjct: 99 NEVDPTLTFRRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLV 158
Query: 175 PDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
PDMN FYAQY SIQPW+Q+ +G Q QS+ +R +LDGLYECILCACCSTSCPSYW
Sbjct: 159 PDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYW 218
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN +KYLGPAVLMQAYRW+IDSRD+ +RL+++ D FS ++CHTIMNCT+TCPK LNP
Sbjct: 219 WNADKYLGPAVLMQAYRWVIDSRDDYAQERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPA 278
Query: 294 RAIAEIKKLLSGLVKKDKPGLDTAAL 319
+AI EIK LL+G K KP + +A
Sbjct: 279 KAIGEIKSLLTGF--KSKPAAEPSAF 302
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KIDA+ K +KIYPL
Sbjct: 89 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPL 148
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 149 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 174
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 130 ACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 177
>gi|209954765|dbj|BAG80573.1| succinate dehydrogenase iron-sulfur subunit [Aspergillus oryzae]
Length = 278
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 164/254 (64%), Gaps = 51/254 (20%)
Query: 102 RSF-QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
RS+ + AAA P+E P + KTF IYRWNPD+P EKP MQ Y +DLN
Sbjct: 25 RSYATVDAAAQDPNPSETP-RTKTFHIYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALI 83
Query: 150 ---NKIDAN-----------------------------------DKVSKIYPLPHMYVVK 171
N++D K S+IYPLPH YVVK
Sbjct: 84 RIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVK 143
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ FY QYKSI+P+LQR+ + +Y QS ++RKKLDGLYECILCACCSTSCPS
Sbjct: 144 DLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPS 203
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN E+YLGPA+L+Q+YRW+ DSRDEKTA+R + L + SVYRC TI+NC+RTCPKGLN
Sbjct: 204 YWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALDNSMSVYRCLTILNCSRTCPKGLN 263
Query: 292 PGRAIAEIKKLLSG 305
P RAIAEIKKL++
Sbjct: 264 PARAIAEIKKLMAA 277
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 77 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN----------IRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L K L + + L A
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCAC 196
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 197 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 240
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 113 GVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 165
>gi|400596247|gb|EJP64023.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Beauveria bassiana ARSEF 2860]
Length = 276
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 167/266 (62%), Gaps = 53/266 (19%)
Query: 91 KILGTLTAKNIR---SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD 147
++LGT +R +F S A+ S V +KP + KTF IYRWNPD P EKP +Q Y +D
Sbjct: 9 RVLGTARTAALRPSVAFSRSMASVSEVEEQKP-RMKTFQIYRWNPDTPTEKPRLQSYTID 67
Query: 148 LNNK----IDANDKVS-------------------------------------------- 159
LN +DA ++
Sbjct: 68 LNKTGPMMLDAIIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSAD 127
Query: 160 -KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+LQRD +Y QS +DRKKLDGLYE
Sbjct: 128 VKIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQRDTPAPDGKEYRQSKEDRKKLDGLYE 187
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+ A+R L++ S+YRCHT
Sbjct: 188 CILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERKAERQANLENNMSLYRCHT 247
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NCT+ CPKGLNPG+AIAEIKK ++
Sbjct: 248 ILNCTKACPKGLNPGKAIAEIKKQMA 273
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDA+I+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A KIYPL
Sbjct: 74 MMLDAIIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSADVKIYPL 133
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 134 PHTYVVKDLVPDLTHFYKQYKSIKPYL 160
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I A KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 115 ACLCRIPAESSADVKIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 162
>gi|358379472|gb|EHK17152.1| hypothetical protein TRIVIDRAFT_88418 [Trichoderma virens Gv29-8]
Length = 276
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/271 (50%), Positives = 166/271 (61%), Gaps = 53/271 (19%)
Query: 86 LGGPWKILGTLTAKNIRS---FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQ 142
L +IL + T R F S A+ S ++P + K+F IYRWNPD P EKP +Q
Sbjct: 4 LRSSTRILSSSTRAAFRPSAVFSRSMASVSETTEQQP-RVKSFQIYRWNPDTPTEKPRLQ 62
Query: 143 EYKVDLNNK----IDANDKVS--------------------------------------- 159
Y +DLN +DA K+
Sbjct: 63 TYSIDLNKTGPMILDALIKIKNEQDPSLTFRRSCREGICGSCAMNINGQNTLACLCRIPT 122
Query: 160 ------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKL 213
KIYPLPH YVVKDLVPD+ +FY QYKSIQP+LQRD +Y QS DRKKL
Sbjct: 123 ESASDVKIYPLPHTYVVKDLVPDLTHFYKQYKSIQPYLQRDTPAEDGKEYRQSKADRKKL 182
Query: 214 DGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSV 273
DGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDE+T R ++L++ S+
Sbjct: 183 DGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLIDSRDERTEARKSKLENSMSL 242
Query: 274 YRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRCHTI+NCTR CPKGLNPG+AIAEIKK +S
Sbjct: 243 YRCHTILNCTRACPKGLNPGKAIAEIKKQMS 273
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALIKIKNE DP+LTFRRSCREGICGSCAMNI G NTLAC+ +I KIYPL
Sbjct: 74 MILDALIKIKNEQDPSLTFRRSCREGICGSCAMNINGQNTLACLCRIPTESASDVKIYPL 133
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QYKSIQ +L
Sbjct: 134 PHTYVVKDLVPDLTHFYKQYKSIQPYL 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSIQP+L R
Sbjct: 129 KIYPLPHTYVVKDLVPDLTHFYKQYKSIQPYLQR 162
>gi|89573849|gb|ABD77150.1| succinate dehydrogenase complex subunit B [Hippopotamus amphibius]
Length = 248
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/236 (55%), Positives = 159/236 (67%), Gaps = 50/236 (21%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 10 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNE 69
Query: 151 ---------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPD 176
+ID N +KVSKIYPLPHMYV+KDL+PD
Sbjct: 70 IDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLIPD 129
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 130 LSNFYAQYKSIEPYLKKKDESQEGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWN 189
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCT+TCPKGLN
Sbjct: 190 ADKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLN 245
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDL+PD++NFYAQYKSI+ +L
Sbjct: 118 PHMYVIKDLIPDLSNFYAQYKSIEPYL 144
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDL+PD++NFYAQYKSI+P+L +
Sbjct: 95 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLIPDLSNFYAQYKSIEPYLKK 146
>gi|68488255|ref|XP_712003.1| hypothetical protein CaO19.8251 [Candida albicans SC5314]
gi|68488298|ref|XP_711983.1| hypothetical protein CaO19.637 [Candida albicans SC5314]
gi|46433335|gb|EAK92779.1| hypothetical protein CaO19.637 [Candida albicans SC5314]
gi|46433359|gb|EAK92802.1| hypothetical protein CaO19.8251 [Candida albicans SC5314]
gi|238879971|gb|EEQ43609.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Candida albicans WO-1]
Length = 263
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/252 (51%), Positives = 162/252 (64%), Gaps = 49/252 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
++ Q S + + AEK + K F IYRWNPD P+ +P MQ Y+VDLN
Sbjct: 10 KAVQFSVRSLATAAAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLK 69
Query: 151 -------------------------------------KIDAND-KVSKIYPLPHMYVVKD 172
+ID ++ K K+YPLPHM+VV+D
Sbjct: 70 IKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVRD 129
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ +FY QYKSI+P+LQR+ + LQS++DR KLDGLYECILCACCSTSCPSY
Sbjct: 130 LVPDLTHFYKQYKSIEPYLQRESNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSY 189
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPAVLMQAYRW+IDSRD+ TA+R L++ S+YRCHTIMNC RTCPKGLNP
Sbjct: 190 WWNQQQYLGPAVLMQAYRWLIDSRDQATANRKAMLQNSMSLYRCHTIMNCARTCPKGLNP 249
Query: 293 GRAIAEIKKLLS 304
G+AIAEIKK L+
Sbjct: 250 GKAIAEIKKQLA 261
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ +ID ++ K K+YPL
Sbjct: 62 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 122 PHMFVVRDLVPDLTHFYKQYKSIEPYL 148
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L +ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 103 ACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQRE 151
>gi|149024456|gb|EDL80953.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 295
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 161/248 (64%), Gaps = 50/248 (20%)
Query: 95 TLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----- 149
+ TA Q A + A + KTFAIYRW+PDK +KP MQ YKVDLN
Sbjct: 14 SATALGRVGLQFQACREAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPM 73
Query: 150 ---------NKIDAN-----------------------------------DKVSKIYPLP 165
N+ID+ KVSKIYPLP
Sbjct: 74 VLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLP 133
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCAC 224
HMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCAC
Sbjct: 134 HMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCAC 193
Query: 225 CSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTR 284
CSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL +L+DPFS+YRCHTIMNCT+
Sbjct: 194 CSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQ 253
Query: 285 TCPKGLNP 292
TCPK P
Sbjct: 254 TCPKVWQP 261
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L
Sbjct: 110 GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYL 159
>gi|327296007|ref|XP_003232698.1| succinate dehydrogenase iron-sulfur protein [Trichophyton rubrum
CBS 118892]
gi|326465009|gb|EGD90462.1| succinate dehydrogenase iron-sulfur protein [Trichophyton rubrum
CBS 118892]
Length = 284
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 138/281 (49%), Positives = 171/281 (60%), Gaps = 53/281 (18%)
Query: 77 AQYKSIQRHLGGPWKILG-TLTAKNIRSFQLSA--AASSAVPAEKPA-KYKTFAIYRWNP 132
A +S R G ++ +T+++ + + +A +S+ P PA K KTF IYRWNP
Sbjct: 2 ASLRSTSRLFRGSSALMRPVMTSRSYATVEANAKPTEASSAPTSAPAPKMKTFKIYRWNP 61
Query: 133 DKPDEKPTMQEYKVDLNNK----IDA---------------------------------- 154
D+P KP MQ Y +DLN +DA
Sbjct: 62 DEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVN 121
Query: 155 -----------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQY 203
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+LQRD + +
Sbjct: 122 TLACLCRTPTDTTKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTPSPDGREN 181
Query: 204 LQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADR 263
QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDE+T R
Sbjct: 182 RQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDERTEQR 241
Query: 264 LNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIKK++S
Sbjct: 242 KAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMS 282
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ + + K ++IYPL
Sbjct: 83 MVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 143 PHTYVVKDLVPDMTQFYKQYKSIKPYL 169
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 135 KETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 171
>gi|125982577|ref|XP_001355118.1| GA20284 [Drosophila pseudoobscura pseudoobscura]
gi|54643431|gb|EAL32175.1| GA20284 [Drosophila pseudoobscura pseudoobscura]
Length = 371
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/250 (52%), Positives = 160/250 (64%), Gaps = 54/250 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K F IYRW +P E+P MQ Y +DL+
Sbjct: 121 RIKNFEIYRW---QPGEQPKMQTYAIDLSQCGAMVLDALIKIKNEVDQTLTFRRSCREGI 177
Query: 151 ------KIDANDKVS-------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
ID + ++ +IYPLPH+YVV+DLVPD+ FY QY+SIQPWL
Sbjct: 178 CGSCAMNIDGTNTLACVTPINQSTSGSCRIYPLPHLYVVRDLVPDLTQFYDQYRSIQPWL 237
Query: 192 QRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
QR+ + +G AQYLQSL+DR KLDGLYECILCACC TSCPSYWWN +KYLGPAVLMQA+
Sbjct: 238 QRNNIQNEMGKAQYLQSLEDRNKLDGLYECILCACCQTSCPSYWWNSDKYLGPAVLMQAF 297
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
RW+IDSRDE T RL L+DP+ +YRCHTI+NCT TCPK LNP RAI ++K+LLSG KK
Sbjct: 298 RWVIDSRDEATEQRLCFLQDPWKLYRCHTILNCTNTCPKNLNPARAIIQLKQLLSGAKKK 357
Query: 310 DKPGLDTAAL 319
+KP L T AL
Sbjct: 358 NKPELQTDAL 367
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 74/91 (81%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC++ I+ + S +IYPL
Sbjct: 151 MVLDALIKIKNEVDQTLTFRRSCREGICGSCAMNIDGTNTLACVTPINQSTSGSCRIYPL 210
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPD+ FY QY+SIQ PW
Sbjct: 211 PHLYVVRDLVPDLTQFYDQYRSIQ-----PW 236
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
+IYPLPH+YVV+DLVPD+ FY QY+SIQPWL R+
Sbjct: 206 RIYPLPHLYVVRDLVPDLTQFYDQYRSIQPWLQRN 240
>gi|366992351|ref|XP_003675941.1| hypothetical protein NCAS_0C05870 [Naumovozyma castellii CBS 4309]
gi|342301806|emb|CCC69577.1| hypothetical protein NCAS_0C05870 [Naumovozyma castellii CBS 4309]
Length = 265
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 159/243 (65%), Gaps = 50/243 (20%)
Query: 111 SSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------- 150
+S A +P + KTF +YRWNPD+P EKP +Q ++VDLN+
Sbjct: 22 ASTTQATQP-RMKTFKVYRWNPDQPTEKPHLQSFQVDLNSCGPMVLDALLKIKNEQDSTL 80
Query: 151 ----------------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFY 181
KID N+ K KIYPLPHMYVVKDLVPD+ NFY
Sbjct: 81 TFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKQLKIYPLPHMYVVKDLVPDLTNFY 140
Query: 182 AQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLG 241
QYKSIQP+LQR + LQS++DRKKL+GLYECILCACCSTSCPSYWWN E+YLG
Sbjct: 141 QQYKSIQPYLQRSSYPEDGKEVLQSIEDRKKLNGLYECILCACCSTSCPSYWWNQEEYLG 200
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PAVLMQAYRW+IDSRD+ T R L++ S+YRCHTIMNCT+TCPKGLNPG AIA+IKK
Sbjct: 201 PAVLMQAYRWLIDSRDQATKARKTMLENSMSLYRCHTIMNCTKTCPKGLNPGFAIAKIKK 260
Query: 302 LLS 304
L+
Sbjct: 261 SLA 263
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ KID N+ K KIYPL
Sbjct: 64 MVLDALLKIKNEQDSTLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKQLKIYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKSIQ +L
Sbjct: 124 PHMYVVKDLVPDLTNFYQQYKSIQPYL 150
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID N+ K KIYPLPHMYVVKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 105 ACLCKIDQNESKQLKIYPLPHMYVVKDLVPDLTNFYQQYKSIQPYLQRS 153
>gi|126139906|ref|XP_001386475.1| succinate dehydrogenase subunit [Scheffersomyces stipitis CBS 6054]
gi|126093759|gb|ABN68446.1| succinate dehydrogenase subunit [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 158/241 (65%), Gaps = 49/241 (20%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------------- 150
A AEK ++ K+F IYRWNPD P+ PTMQ+Y +DLN+
Sbjct: 20 ATSAEKTSRIKSFQIYRWNPDTPEVAPTMQKYDIDLNDCGPMVLDAILKIKNEQDSTLTF 79
Query: 151 --------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQ 183
+ID + K KIYPLPHM+VV+DLVPD+ +FY Q
Sbjct: 80 RRSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQ 139
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
YKSIQP+LQRD + LQS++DR KLDGLYECILCACCSTSCPSYWWN ++YLGPA
Sbjct: 140 YKSIQPYLQRDTPPTDGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPA 199
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRW+IDSRDE + R L++ S+YRCHTIMNC+RTCPKGLNPG+AIAEIKK L
Sbjct: 200 VLMQAYRWLIDSRDEASKIRREMLQNSMSLYRCHTIMNCSRTCPKGLNPGKAIAEIKKQL 259
Query: 304 S 304
+
Sbjct: 260 A 260
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDA++KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ +ID + K KIYPL
Sbjct: 61 MVLDAILKIKNEQDSTLTFRRSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDLKIYPL 120
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ +L
Sbjct: 121 PHMFVVRDLVPDLTHFYKQYKSIQPYL 147
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +ID + K KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 102 ACLCRIDTDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQR 149
>gi|323347581|gb|EGA81848.1| Sdh2p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764256|gb|EHN05780.1| Sdh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 266
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 152/233 (65%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF +YRWNPD+P KP +Q Y+VDLN+
Sbjct: 32 RLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGI 91
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L
Sbjct: 92 CGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW
Sbjct: 152 QRSSFPXDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYRW 211
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRD+ T R L + S+YRCHTIMNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 212 LIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 106/169 (62%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K KIYPL
Sbjct: 65 MVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQLKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-GPWKILGTLTAKNIRSFQ---------LSAA 109
PHM++VKDLVPD+ NFY QYKSIQ +L + GT ++I + L A
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSFPXDGTEVLQSIEDRKKLDGLYECILCAC 184
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ +Y A+ YRW D D+ + K LNN +
Sbjct: 185 CSTSCPSYWWNQEQYLGPAVLMQAYRWLIDSRDQ--ATKTRKAMLNNSM 231
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 106 ACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
>gi|358056719|dbj|GAA97382.1| hypothetical protein E5Q_04060 [Mixia osmundae IAM 14324]
Length = 294
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 176/290 (60%), Gaps = 52/290 (17%)
Query: 64 VVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYK 123
++ L P N A+Y ++ P L T ++ + Q ++ +A P +KP+K K
Sbjct: 6 TIRMLRPLGQNGIAKY-GMRTFATSPVARLATPASE---ASQDKGSSMAAAPNKKPSKPK 61
Query: 124 TFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------------- 150
F IYRWNPDKP EKP +Q Y +DL
Sbjct: 62 QFQIYRWNPDKPAEKPYLQTYTLDLAQCGPMVLDALIKIKNEIDPTLTFRRSCREGICGS 121
Query: 151 ---------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
+I+A K KIYPLPHMY++KD+VPDM FY QYKSI+P+L+ D
Sbjct: 122 CAMNIDGVNTLACLKRINAEGKDVKIYPLPHMYIIKDIVPDMTQFYKQYKSIEPFLKADS 181
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
E ++LQS +DR+KLDG+YECILCACCST+CPSYWWN ++YLGPAVLMQAYRW+ DS
Sbjct: 182 EPADGKEHLQSREDRQKLDGMYECILCACCSTACPSYWWNQDEYLGPAVLMQAYRWVADS 241
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
RD A+RL +L++PFS+YRCHTI NC++TCPKGLNP +AIA +K+ L+
Sbjct: 242 RDSAKAERLQRLQNPFSLYRCHTIFNCSKTCPKGLNPAKAIAHLKQELAS 291
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 75/86 (87%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I+A K KIYPLP
Sbjct: 92 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRINAEGKDVKIYPLP 151
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMY++KD+VPDM FY QYKSI+ L
Sbjct: 152 HMYIIKDIVPDMTQFYKQYKSIEPFL 177
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I+A K KIYPLPHMY++KD+VPDM FY QYKSI+P+L
Sbjct: 128 GVNTLACLKRINAEGKDVKIYPLPHMYIIKDIVPDMTQFYKQYKSIEPFL 177
>gi|115401250|ref|XP_001216213.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114190154|gb|EAU31854.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 278
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 164/258 (63%), Gaps = 51/258 (19%)
Query: 98 AKNIRSF-QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
A RS+ + A + VP+ +P + KTF +YRWNPDKP EKPTMQ Y +DLN
Sbjct: 21 AAFARSYATVEAQSQDPVPSAQP-RMKTFHVYRWNPDKPAEKPTMQAYSLDLNKTGPMML 79
Query: 150 -------NKIDAN-----------------------------------DKVSKIYPLPHM 167
N++D K S+IYPLPH
Sbjct: 80 DALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHT 139
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
YVVKDLVPD+ FY QYKSI+P+LQ D + +Y QS +DRKKLDGLYECILCACCST
Sbjct: 140 YVVKDLVPDLTQFYKQYKSIKPYLQNDTKPEDGLEYRQSPEDRKKLDGLYECILCACCST 199
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN E+YLGPA+L+Q+YRW+ DSRD KTA+R L + SVYRCHTI+NC+RTCP
Sbjct: 200 SCPSYWWNSEEYLGPAILLQSYRWLADSRDLKTAERKAALDNSMSVYRCHTILNCSRTCP 259
Query: 288 KGLNPGRAIAEIKKLLSG 305
KGLNP RAIAEIKK+++
Sbjct: 260 KGLNPARAIAEIKKMMAA 277
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 77 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYKSIKPYL 163
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 31/137 (22%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN +K PA MQAY ++ D L ++K DP +R R+C
Sbjct: 51 YRWNPDK---PAEKPTMQAYSLDLNKTGPMMLDALIRIKNEMDPTLTFR--------RSC 99
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLV 344
+G+ G + G++T A L +I + K S+IYPLPH YVVKDLV
Sbjct: 100 REGI-------------CGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLV 146
Query: 345 PDMNNFYAQYKSIQPWL 361
PD+ FY QYKSI+P+L
Sbjct: 147 PDLTQFYKQYKSIKPYL 163
>gi|340923970|gb|EGS18873.1| succinate dehydrogenase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 287
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 134/259 (51%), Positives = 163/259 (62%), Gaps = 52/259 (20%)
Query: 97 TAKNIRSFQ--LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----- 149
TA +R AA +A +EKP + KTF +YRWNPDKP EKP MQ Y +DLN
Sbjct: 29 TAAAVRGMAQVADAAQQTATSSEKP-RLKTFQVYRWNPDKPTEKPRMQSYTLDLNKTGPM 87
Query: 150 ---------NKID-----------------------------------ANDKVSKIYPLP 165
N++D ++ KIYPLP
Sbjct: 88 VLDALLRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPKEDNSDVKIYPLP 147
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
H YV+KDLVPD+ +FY QYKSI+P+LQRD +Y QS +DRKKLDGLYECILCACC
Sbjct: 148 HTYVIKDLVPDLTHFYKQYKSIKPYLQRDTPAPDGKEYRQSKEDRKKLDGLYECILCACC 207
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+ A+R L + S+YRCHTI+NCTRT
Sbjct: 208 STSCPSYWWNSEEYLGPAILLQSYRWLADSRDERKAERKAALNNSMSLYRCHTILNCTRT 267
Query: 286 CPKGLNPGRAIAEIKKLLS 304
CPKGLNPG AIA+IKK L+
Sbjct: 268 CPKGLNPGLAIAQIKKELA 286
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 102/169 (60%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I D KIYPL
Sbjct: 87 MVLDALLRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPKEDNSDVKIYPL 146
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL--------GGPWKILGTLTAK--NIRSFQLSAA 109
PH YV+KDLVPD+ +FY QYKSI+ +L G ++ K + L A
Sbjct: 147 PHTYVIKDLVPDLTHFYKQYKSIKPYLQRDTPAPDGKEYRQSKEDRKKLDGLYECILCAC 206
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ +Y AI YRW D DE+ E K LNN +
Sbjct: 207 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERKA--ERKAALNNSM 253
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K MQ+Y ++ D L ++K DP +R R+C +
Sbjct: 61 YRWNPDKPTEKP-RMQSYTLDLNKTGPMVLDALLRIKNELDPTLTFR--------RSCRE 111
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPD 346
G+ G + G +T A L +I D KIYPLPH YV+KDLVPD
Sbjct: 112 GI-------------CGSCAMNINGTNTLACLCRIPKEDNSDVKIYPLPHTYVIKDLVPD 158
Query: 347 MNNFYAQYKSIQPWLPR 363
+ +FY QYKSI+P+L R
Sbjct: 159 LTHFYKQYKSIKPYLQR 175
>gi|156837593|ref|XP_001642818.1| hypothetical protein Kpol_388p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113390|gb|EDO14960.1| hypothetical protein Kpol_388p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 258
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/241 (56%), Positives = 155/241 (64%), Gaps = 49/241 (20%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------------- 150
A E A+ K+F IYRWNPD P KP +Q Y+VDLN+
Sbjct: 16 ASGVEHTARMKSFKIYRWNPDTPSVKPVLQNYQVDLNDCGPMVLDALIKIKNEQDGTLTF 75
Query: 151 --------------------------KIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQ 183
KID N K KIYPLPHMYVVKDLVPD+ NFY Q
Sbjct: 76 RRSCREGICGSCAMNIGGSNTLACLCKIDQDNTKDLKIYPLPHMYVVKDLVPDLTNFYKQ 135
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
YKSIQP+LQR + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA
Sbjct: 136 YKSIQPYLQRKSFPEDGKEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPA 195
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNCT+TCPKGLNPG+AIAEIKK L
Sbjct: 196 VLMQAYRWLIDSRDQASHIRKEMLENSMSLYRCHTIMNCTKTCPKGLNPGKAIAEIKKSL 255
Query: 304 S 304
+
Sbjct: 256 A 256
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDALIKIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ KID N K KIYPL
Sbjct: 57 MVLDALIKIKNEQDGTLTFRRSCREGICGSCAMNIGGSNTLACLCKIDQDNTKDLKIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKSIQ +L
Sbjct: 117 PHMYVVKDLVPDLTNFYKQYKSIQPYL 143
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID N K KIYPLPHMYVVKDLVPD+ NFY QYKSIQP+L R
Sbjct: 98 ACLCKIDQDNTKDLKIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYLQR 145
>gi|121713450|ref|XP_001274336.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus clavatus NRRL 1]
gi|119402489|gb|EAW12910.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus clavatus NRRL 1]
Length = 299
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/240 (54%), Positives = 158/240 (65%), Gaps = 50/240 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P+E+P + K F IYRW+PD+P EKP MQ Y +DLN N+ID
Sbjct: 60 PSEQP-RTKKFHIYRWSPDQPSEKPKMQTYTLDLNKTGPMMLDALIRIKNEIDPTLTFRR 118
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
+ S+IYPLPH YVVKDLVPDM FY QYK
Sbjct: 119 SCREGICGSCAMNIDGVNTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDMTYFYKQYK 178
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+P+LQR+ + +Y QS ++RKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L
Sbjct: 179 SIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 238
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+Q+YRW+ DSRDEKTA+R + L + SVYRCHTI+NC+RTCPKGLNP RAIAEIKK+L+
Sbjct: 239 LQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMLAS 298
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 98 MMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKQESRIYPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN----------IRSFQLSAA 109
PH YVVKDLVPDM FY QYKSI+ +L K L + + L A
Sbjct: 158 PHTYVVKDLVPDMTYFYKQYKSIKPYLQRETKTEDGLEYRQSPEERKKLDGLYECILCAC 217
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 218 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 261
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDANDKV-SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 134 GVNTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDMTYFYKQYKSIKPYLQR 186
>gi|255721639|ref|XP_002545754.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Candida tropicalis MYA-3404]
gi|240136243|gb|EER35796.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Candida tropicalis MYA-3404]
Length = 263
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 161/252 (63%), Gaps = 49/252 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
++ Q S + + EK + K F +YRWNPD P+ +P MQ Y+VDLN
Sbjct: 10 KAAQFSIRSLATATTEKAPRLKKFQVYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLK 69
Query: 151 -------------------------------------KIDAND-KVSKIYPLPHMYVVKD 172
+ID ++ K K+YPLPHM+VV+D
Sbjct: 70 IKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDETKDLKVYPLPHMFVVRD 129
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ +FY QYKSI+P+LQRD + LQS++DR KLDGLYECILCACCSTSCPSY
Sbjct: 130 LVPDLTHFYKQYKSIEPYLQRDSNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSY 189
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPAVLMQAYRW+IDSRD+ TA R L++ S+YRCHTIMNCT+TCPKGLNP
Sbjct: 190 WWNQQQYLGPAVLMQAYRWLIDSRDQATASRKAMLQNSMSLYRCHTIMNCTKTCPKGLNP 249
Query: 293 GRAIAEIKKLLS 304
GRAIAE+KK L+
Sbjct: 250 GRAIAEVKKQLA 261
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ +ID ++ K K+YPL
Sbjct: 62 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDETKDLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 122 PHMFVVRDLVPDLTHFYKQYKSIEPYL 148
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 103 ACLCRIDQDETKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQR 150
>gi|259147950|emb|CAY81199.1| Sdh2p [Saccharomyces cerevisiae EC1118]
Length = 266
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 152/233 (65%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF +YRWNPD+P KP +Q Y+VDLN+
Sbjct: 32 RLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGI 91
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L
Sbjct: 92 CGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW
Sbjct: 152 QRSSFPEDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYRW 211
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRD+ T R L + S+YRCHTIMNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 212 LIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K KIYPL
Sbjct: 65 MVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQLKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM++VKDLVPD+ NFY QYKSIQ +L
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 106 ACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
>gi|403215877|emb|CCK70375.1| hypothetical protein KNAG_0E01080 [Kazachstania naganishii CBS
8797]
Length = 264
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 153/233 (65%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYRWNPD P++KP +Q ++VDLN
Sbjct: 30 RLKTFKIYRWNPDVPEKKPRLQSFQVDLNECGPMVLDALLKIKDEQDPTLTFRRSCREGI 89
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K KIYPLPHMY+VKDLVPD+ NFY QYKSIQP+L
Sbjct: 90 CGSCAMNIGGSNTLACLCKIDQNESKQLKIYPLPHMYIVKDLVPDLTNFYQQYKSIQPYL 149
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW
Sbjct: 150 QRTSYPEDGKEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRW 209
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRD+ T R L++ S+YRCHTIMNCTRTCPKGLNPG AIAEIKK ++
Sbjct: 210 LIDSRDQATKHRKTMLQNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSMA 262
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E DPTLTFRRSCREGICGSCAMNIGG NTLAC+ KID N+ K KIYPL
Sbjct: 63 MVLDALLKIKDEQDPTLTFRRSCREGICGSCAMNIGGSNTLACLCKIDQNESKQLKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ NFY QYKSIQ +L
Sbjct: 123 PHMYIVKDLVPDLTNFYQQYKSIQPYL 149
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID N+ K KIYPLPHMY+VKDLVPD+ NFY QYKSIQP+L R+
Sbjct: 104 ACLCKIDQNESKQLKIYPLPHMYIVKDLVPDLTNFYQQYKSIQPYLQRT 152
>gi|336366165|gb|EGN94513.1| SDHB, iron-sulfur protein subunit of succinate dehydrogenase
[Serpula lacrymans var. lacrymans S7.3]
gi|336378839|gb|EGO19996.1| iron-sulfur protein subunit of succinate dehydrogenase, Sdh2p
[Serpula lacrymans var. lacrymans S7.9]
Length = 279
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/262 (52%), Positives = 164/262 (62%), Gaps = 54/262 (20%)
Query: 97 TAKNI----RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--- 149
TA+N+ RSF SA S AVP EKP K F IYRWNPD+P +KPT+Q Y +DLN
Sbjct: 18 TAQNVGGGVRSFASSARRSQAVPTEKPVLMKEFKIYRWNPDEPAKKPTLQSYTIDLNQTG 77
Query: 150 -----------NKIDAN-----------------------------------DKVSKIYP 163
N+ID K +K+YP
Sbjct: 78 PMILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRTDRNVGKDAKVYP 137
Query: 164 LPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCA 223
LPHMY+VKDLVPD+ FY QYKSIQP+LQ D + ++LQS ++RKKLDGLYECILCA
Sbjct: 138 LPHMYIVKDLVPDLTLFYKQYKSIQPYLQNDNPP-ASGEFLQSQEERKKLDGLYECILCA 196
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCSTSCPSYWWN ++YLGPA LMQAYRWI DSRD A+R +L++ S+YRCHTI NC+
Sbjct: 197 CCSTSCPSYWWNQDEYLGPATLMQAYRWIADSRDSYGAERKEKLQNEMSMYRCHTIFNCS 256
Query: 284 RTCPKGLNPGRAIAEIKKLLSG 305
RTCPKGLNP AIA+IK L+
Sbjct: 257 RTCPKGLNPAAAIAKIKLELAA 278
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ + D N K +K+YPL
Sbjct: 79 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRTDRNVGKDAKVYPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSIQ +L
Sbjct: 139 PHMYIVKDLVPDLTLFYKQYKSIQPYL 165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L + D N K +K+YPLPHMY+VKDLVPD+ FY QYKSIQP+L
Sbjct: 120 ACLCRTDRNVGKDAKVYPLPHMYIVKDLVPDLTLFYKQYKSIQPYL 165
>gi|149238940|ref|XP_001525346.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Lodderomyces elongisporus NRRL YB-4239]
gi|146450839|gb|EDK45095.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Lodderomyces elongisporus NRRL YB-4239]
Length = 261
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/254 (52%), Positives = 163/254 (64%), Gaps = 50/254 (19%)
Query: 101 IRSFQLSAAASSAVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------- 149
+R L+ + A AE+ A + K F IYRWNPD P+ +P MQ Y++DLN
Sbjct: 6 LRPRALNCVRTLATAAEEKAPRVKKFQIYRWNPDTPEVQPKMQTYEIDLNKCGPMVLDAL 65
Query: 150 ----NKIDAN-----------------------------------DKVSKIYPLPHMYVV 170
N+ DA K +K+YPLPHM+VV
Sbjct: 66 LKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDTTKETKVYPLPHMFVV 125
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
+DLVPD+ +FY QYKSIQP+LQRD + LQS++DR KLDGLYECILCACCSTSCP
Sbjct: 126 RDLVPDLTHFYKQYKSIQPYLQRDTHPADGRENLQSIEDRAKLDGLYECILCACCSTSCP 185
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN ++YLGPAVLMQAYRW+IDSRD+ TA+R L++ S+YRCHTIMNC RTCPKGL
Sbjct: 186 SYWWNQQQYLGPAVLMQAYRWLIDSRDQATAERKAMLQNSMSLYRCHTIMNCARTCPKGL 245
Query: 291 NPGRAIAEIKKLLS 304
NPG+AIAEIKK L+
Sbjct: 246 NPGKAIAEIKKQLA 259
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ +ID + K +K+YPL
Sbjct: 60 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDTTKETKVYPL 119
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ +L
Sbjct: 120 PHMFVVRDLVPDLTHFYKQYKSIQPYL 146
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +ID + K +K+YPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 101 ACLCRIDQDTTKETKVYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQR 148
>gi|6322987|ref|NP_013059.1| succinate dehydrogenase iron-sulfur protein subunit SDH2
[Saccharomyces cerevisiae S288c]
gi|118619|sp|P21801.1|DHSB_YEAST RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|172549|gb|AAA35021.1| succinate dehydrogenase iron-protein subunit (SDH) (EC 1.3.99.1)
[Saccharomyces cerevisiae]
gi|1360235|emb|CAA97492.1| SDH2 [Saccharomyces cerevisiae]
gi|45270268|gb|AAS56515.1| YLL041C [Saccharomyces cerevisiae]
gi|151941130|gb|EDN59508.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit
[Saccharomyces cerevisiae YJM789]
gi|190406009|gb|EDV09276.1| succinate dehydrogenase iron-sulfur protein subunit [Saccharomyces
cerevisiae RM11-1a]
gi|207343274|gb|EDZ70786.1| YLL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271524|gb|EEU06570.1| Sdh2p [Saccharomyces cerevisiae JAY291]
gi|285813385|tpg|DAA09281.1| TPA: succinate dehydrogenase iron-sulfur protein subunit SDH2
[Saccharomyces cerevisiae S288c]
gi|323303926|gb|EGA57706.1| Sdh2p [Saccharomyces cerevisiae FostersB]
gi|323308174|gb|EGA61424.1| Sdh2p [Saccharomyces cerevisiae FostersO]
gi|349579688|dbj|GAA24849.1| K7_Sdh2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297659|gb|EIW08758.1| Sdh2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 266
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 152/233 (65%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF +YRWNPD+P KP +Q Y+VDLN+
Sbjct: 32 RLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGI 91
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L
Sbjct: 92 CGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW
Sbjct: 152 QRSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYRW 211
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRD+ T R L + S+YRCHTIMNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 212 LIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K KIYPL
Sbjct: 65 MVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQLKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM++VKDLVPD+ NFY QYKSIQ +L
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 106 ACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
>gi|367016515|ref|XP_003682756.1| hypothetical protein TDEL_0G01780 [Torulaspora delbrueckii]
gi|359750419|emb|CCE93545.1| hypothetical protein TDEL_0G01780 [Torulaspora delbrueckii]
Length = 260
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 156/238 (65%), Gaps = 49/238 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A + + KTF IYRWNPDKP EKP +Q ++VDL++
Sbjct: 21 ASQTPRLKTFKIYRWNPDKPAEKPRLQSFQVDLDDCGPMVLDALLKIKDQQDSSLTLRRS 80
Query: 151 -----------------------KIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
KID + K +KIYPLPHMY++KDLVPD+ NFY QYKS
Sbjct: 81 CREGICGSCAMNIGGRNTLACLCKIDQDHKKETKIYPLPHMYIIKDLVPDLTNFYQQYKS 140
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
IQP+LQR + LQS+ DRKKLDGLYECILCACCST+CPSYWWN E+YLGPAVLM
Sbjct: 141 IQPYLQRSTFPADGKEVLQSVADRKKLDGLYECILCACCSTACPSYWWNQEQYLGPAVLM 200
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
QAYRW++DSRD+ A R N L++ S+YRCHTIMNCTRTCPKGLNPG AIAEIKK ++
Sbjct: 201 QAYRWLVDSRDQAGAIRKNMLQNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKAIA 258
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK++ D +LT RRSCREGICGSCAMNIGG NTLAC+ KID + K +KIYPL
Sbjct: 59 MVLDALLKIKDQQDSSLTLRRSCREGICGSCAMNIGGRNTLACLCKIDQDHKKETKIYPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY++KDLVPD+ NFY QYKSIQ +L
Sbjct: 119 PHMYIIKDLVPDLTNFYQQYKSIQPYL 145
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KID + K +KIYPLPHMY++KDLVPD+ NFY QYKSIQP+L RS
Sbjct: 100 ACLCKIDQDHKKETKIYPLPHMYIIKDLVPDLTNFYQQYKSIQPYLQRS 148
>gi|344303942|gb|EGW34191.1| hypothetical protein SPAPADRAFT_59621 [Spathaspora passalidarum
NRRL Y-27907]
Length = 266
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/250 (53%), Positives = 164/250 (65%), Gaps = 51/250 (20%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVS 159
F L A A++A A++ + K F IYRWNPD P+ +P +Q Y+VDLNN +DA K+
Sbjct: 17 FGLRALATAA--AQQSPRLKKFQIYRWNPDTPEVQPKLQTYEVDLNNCGPMVLDALLKIK 74
Query: 160 ---------------------------------------------KIYPLPHMYVVKDLV 174
K+YPLPHM+VVKDLV
Sbjct: 75 NEQDPTLTLRRSCREGICGSCAMNIGGRNTLACLCRIEPDTSKDLKVYPLPHMFVVKDLV 134
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ +FY QYKSIQP+LQRD + LQS++DR KLDGLYECILCACCSTSC SYWW
Sbjct: 135 PDLTHFYKQYKSIQPYLQRDTNPADGRENLQSIEDRAKLDGLYECILCACCSTSCASYWW 194
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N ++YLGPAVLMQAYRW+IDSRDE T++R L++ S+YRCHTIMNCTRTCPKGLNPG+
Sbjct: 195 NQQQYLGPAVLMQAYRWLIDSRDEYTSNRKVMLQNSMSLYRCHTIMNCTRTCPKGLNPGK 254
Query: 295 AIAEIKKLLS 304
AIAEIK+LL+
Sbjct: 255 AIAEIKRLLA 264
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE DPTLT RRSCREGICGSCAMNIGG NTLAC+ +I+ + K K+YPL
Sbjct: 65 MVLDALLKIKNEQDPTLTLRRSCREGICGSCAMNIGGRNTLACLCRIEPDTSKDLKVYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VVKDLVPD+ +FY QYKSIQ +L
Sbjct: 125 PHMFVVKDLVPDLTHFYKQYKSIQPYL 151
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I+ + K K+YPLPHM+VVKDLVPD+ +FY QYKSIQP+L R
Sbjct: 106 ACLCRIEPDTSKDLKVYPLPHMFVVKDLVPDLTHFYKQYKSIQPYLQR 153
>gi|358374174|dbj|GAA90768.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2
[Aspergillus kawachii IFO 4308]
Length = 299
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 156/240 (65%), Gaps = 50/240 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P+E+P + KTF +YRWNPD+P EKP MQ Y +DLN N++D
Sbjct: 60 PSEQP-RVKTFHVYRWNPDQPTEKPKMQSYSLDLNKTGPMMLDALIRIKNEMDPTLTFRR 118
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
K S+IYPLPH YVVKDLVPD+ FY QYK
Sbjct: 119 SCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTYFYKQYK 178
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+P+LQRD + QS ++RKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L
Sbjct: 179 SIKPYLQRDTPTADGLENRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 238
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+Q+YRW+ DSRDEKTA+R L + SVYRCHTI+NC+RTCPKGLNP RAIAEIKK+++
Sbjct: 239 LQSYRWLADSRDEKTAERKAALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMMTA 298
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 105/174 (60%), Gaps = 29/174 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 98 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PH YVVKDLVPD+ FY QYKSI+ P+ T TA + + Q
Sbjct: 158 PHTYVVKDLVPDLTYFYKQYKSIK-----PYLQRDTPTADGLENRQSPEERKKLDGLYEC 212
Query: 106 -LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ +Y AI YRW D DEK E K L+N +
Sbjct: 213 ILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEK--TAERKAALDNSM 264
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 134 GVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 186
>gi|320581799|gb|EFW96018.1| Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p,
Sdh2p, Sdh3p, Sdh4p) [Ogataea parapolymorpha DL-1]
Length = 253
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/253 (52%), Positives = 161/253 (63%), Gaps = 56/253 (22%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------- 150
IRS ++ A++ + KTF IYRW+PD PD+KP MQEYK+DLN
Sbjct: 6 IRSRGMATQATAQ-------RLKTFKIYRWSPDTPDKKPYMQEYKIDLNQCGPMVLDAII 58
Query: 151 --------------------------------------KIDAN-DKVSKIYPLPHMYVVK 171
KID + K +KIYPLPHMY+V+
Sbjct: 59 KIKNEQDATLTFRRSCREGICGSCAMNIGGQNTLACLCKIDQDTSKETKIYPLPHMYIVR 118
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ +FY QYKSIQP+LQ + + LQS +DRKKLDGLYECILCACCSTSCPS
Sbjct: 119 DLVPDLTHFYKQYKSIQPYLQTKNKPADGKENLQSEEDRKKLDGLYECILCACCSTSCPS 178
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN ++YLGPAVLMQAYRW++DSRDE T R L++ S+YRCHTIMNC RTCPKGLN
Sbjct: 179 YWWNQQEYLGPAVLMQAYRWLVDSRDEATKSRKEMLQNSMSLYRCHTIMNCARTCPKGLN 238
Query: 292 PGRAIAEIKKLLS 304
PG+AIAEIKK L+
Sbjct: 239 PGKAIAEIKKQLA 251
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDA+IKIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ KID + K +KIYPL
Sbjct: 52 MVLDAIIKIKNEQDATLTFRRSCREGICGSCAMNIGGQNTLACLCKIDQDTSKETKIYPL 111
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+V+DLVPD+ +FY QYKSIQ +L
Sbjct: 112 PHMYIVRDLVPDLTHFYKQYKSIQPYL 138
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L KID + K +KIYPLPHMY+V+DLVPD+ +FY QYKSIQP+L
Sbjct: 93 ACLCKIDQDTSKETKIYPLPHMYIVRDLVPDLTHFYKQYKSIQPYL 138
>gi|350639516|gb|EHA27870.1| hypothetical protein ASPNIDRAFT_201642 [Aspergillus niger ATCC
1015]
Length = 299
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 156/240 (65%), Gaps = 50/240 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P+E+P + KTF +YRWNPD+P EKP MQ Y +DLN N++D
Sbjct: 60 PSEQP-RVKTFHVYRWNPDQPTEKPKMQTYSLDLNKTGPMMLDALIRIKNEMDPTLTFRR 118
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
K S+IYPLPH YVVKDLVPD+ FY QYK
Sbjct: 119 SCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTYFYKQYK 178
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+P+LQRD + QS ++RKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L
Sbjct: 179 SIKPYLQRDTPTADGLENRQSPEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 238
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+Q+YRW+ DSRDEKTA+R L + SVYRCHTI+NC+RTCPKGLNP RAIAEIKK+++
Sbjct: 239 LQSYRWLADSRDEKTAERKAALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMMTA 298
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 105/174 (60%), Gaps = 29/174 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 98 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PH YVVKDLVPD+ FY QYKSI+ P+ T TA + + Q
Sbjct: 158 PHTYVVKDLVPDLTYFYKQYKSIK-----PYLQRDTPTADGLENRQSPEERKKLDGLYEC 212
Query: 106 -LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ +Y AI YRW D DEK E K L+N +
Sbjct: 213 ILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEK--TAERKAALDNSM 264
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 134 GVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 186
>gi|344258068|gb|EGW14172.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Cricetulus griseus]
Length = 223
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/163 (73%), Positives = 146/163 (89%), Gaps = 2/163 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID + KVSKIYPLPHMYV+KDLVPD++NFYAQY+SI+P+L++ D+ G QYLQS
Sbjct: 57 TRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYRSIEPYLKKKDESQEGKQQYLQS 116
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +
Sbjct: 117 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAK 176
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
L+DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 177 LQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 219
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 14 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 73
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQY+SI+ +L
Sbjct: 74 PHMYVIKDLVPDLSNFYAQYRSIEPYL 100
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQY+SI+P+L +
Sbjct: 51 GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYRSIEPYLKK 102
>gi|406864154|gb|EKD17200.1| succinate dehydrogenase iron sulfur protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 287
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/268 (51%), Positives = 162/268 (60%), Gaps = 61/268 (22%)
Query: 97 TAKNIRSFQLSAAASSAVPAEK-----------PAKYKTFAIYRWNPDKPDEKPTMQEYK 145
+A +R+F S A + A PA K AK KTF IYRWNPD+P KP MQ Y
Sbjct: 20 SAMPVRAFA-SHATTGAAPASKTSQTVETSSDPAAKTKTFHIYRWNPDEPTSKPRMQSYT 78
Query: 146 VDLN--------------NKIDAN-----------------------------------D 156
+DLN N++D
Sbjct: 79 LDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTK 138
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K SKIYPLPH YVVKD+VPD+ FY QYKSI+P+LQ N +YLQS +DRKKLDGL
Sbjct: 139 KESKIYPLPHTYVVKDIVPDLTLFYKQYKSIKPYLQHSGPGPNNKEYLQSKEDRKKLDGL 198
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN E+YLGPAVLMQ+YRW+ DSRD+K +R L + SVYRC
Sbjct: 199 YECILCACCSTSCPSYWWNSEEYLGPAVLMQSYRWLADSRDQKKEERKAALDNSMSVYRC 258
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTI+NC+RTCPKGLNPG AIAEIKK L+
Sbjct: 259 HTILNCSRTCPKGLNPGMAIAEIKKELA 286
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 77/92 (83%), Gaps = 3/92 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K SKIYPL
Sbjct: 87 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKKESKIYPL 146
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL--GGP 89
PH YVVKD+VPD+ FY QYKSI+ +L GP
Sbjct: 147 PHTYVVKDIVPDLTLFYKQYKSIKPYLQHSGP 178
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 26/124 (20%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 74 MQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR--------RSCREGI------------ 113
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G++T A L +I + K SKIYPLPH YVVKD+VPD+ FY QYKSI+P+
Sbjct: 114 -CGSCAMNIDGVNTLACLCRIPTDTKKESKIYPLPHTYVVKDIVPDLTLFYKQYKSIKPY 172
Query: 361 LPRS 364
L S
Sbjct: 173 LQHS 176
>gi|119479245|ref|XP_001259651.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Neosartorya fischeri NRRL 181]
gi|119407805|gb|EAW17754.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Neosartorya fischeri NRRL 181]
Length = 299
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 157/240 (65%), Gaps = 50/240 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P++ P + K F +YRWNPD+P EKP MQ Y +DLN N+ID
Sbjct: 60 PSQSP-RIKKFHVYRWNPDQPTEKPKMQTYSLDLNKTGPMMLDALIRIKNEIDPTLTFRR 118
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
+ S+IYPLPH YVVKDLVPD+ FY QYK
Sbjct: 119 SCREGICGSCAMNIDGINTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDLTYFYKQYK 178
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+P+LQRD + ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L
Sbjct: 179 SIKPYLQRDTKTEDGLEHRQSPEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 238
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+Q+YRW+ DSRDEKTA+R + L + SVYRCHTI+NC+RTCPKGLNP RAIAEIKK+L+
Sbjct: 239 LQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMLAA 298
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G+NTLAC+ +I + K S+IYPL
Sbjct: 98 MMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACLCRIPTDTKQESRIYPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAK----------NIRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L K L + + L A
Sbjct: 158 PHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTKTEDGLEHRQSPEDRKKLDGLYECILCAC 217
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 218 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 261
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 134 GINTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 186
>gi|89573841|gb|ABD77146.1| succinate dehydrogenase complex subunit B [Ceratotherium simum]
Length = 250
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/251 (53%), Positives = 163/251 (64%), Gaps = 58/251 (23%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P LG + R Q +AA + + K FAIYRW+PDK +KP MQ Y++DL
Sbjct: 5 PSTALGGACLQACRGAQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDL 56
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N+ID+ KVS
Sbjct: 57 NKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVS 116
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYE
Sbjct: 117 KIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQQGKQQYLQSIEDREKLDGLYE 176
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT
Sbjct: 177 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHT 236
Query: 279 IMNCTRTCPKG 289
IMNCT+TCPKG
Sbjct: 237 IMNCTKTCPKG 247
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 62 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 122 PHMYVIKDLVPDLSNFYAQYKSIEPYL 148
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 99 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 150
>gi|323332591|gb|EGA73998.1| Sdh2p [Saccharomyces cerevisiae AWRI796]
gi|323336528|gb|EGA77794.1| Sdh2p [Saccharomyces cerevisiae Vin13]
gi|323353865|gb|EGA85718.1| Sdh2p [Saccharomyces cerevisiae VL3]
Length = 266
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 152/233 (65%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF +YRWNPD+P KP +Q Y+VDLN+
Sbjct: 32 RLKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGI 91
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L
Sbjct: 92 CGSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + LQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+QAYRW
Sbjct: 152 QRSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLLQAYRW 211
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRD+ T R L + S+YRCHTIMNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 212 LIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K KIYPL
Sbjct: 65 MVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQLKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM++VKDLVPD+ NFY QYKSIQ +L
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 106 ACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
>gi|358398203|gb|EHK47561.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Trichoderma atroviride IMI 206040]
Length = 273
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 158/248 (63%), Gaps = 50/248 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS-- 159
S + +S AE+P + K+F IYRWNPD P EKP +Q Y +DLN +DA K+
Sbjct: 24 FSRSMASVSEAEQP-RTKSFQIYRWNPDTPTEKPKLQTYTIDLNKTGPMILDALIKIKNE 82
Query: 160 -------------------------------------------KIYPLPHMYVVKDLVPD 176
KIYPLPH YVVKDLVPD
Sbjct: 83 QDPSLTFRRSCREGICGSCAMNINGQNTLACLCRIPTESASDVKIYPLPHTYVVKDLVPD 142
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ +FY QYKSIQP+LQRD +Y QS DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 143 LTHFYKQYKSIQPYLQRDTPAEDGKEYRQSKADRKKLDGLYECILCACCSTSCPSYWWNS 202
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPA+L+Q+YRW+IDSRDE TA R +L++ S+YRCHTI+NCTR CPKGLNPG+AI
Sbjct: 203 EEYLGPAILLQSYRWLIDSRDEHTAARKAKLENSMSLYRCHTILNCTRACPKGLNPGKAI 262
Query: 297 AEIKKLLS 304
AEIKK +S
Sbjct: 263 AEIKKSMS 270
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALIKIKNE DP+LTFRRSCREGICGSCAMNI G NTLAC+ +I KIYPL
Sbjct: 71 MILDALIKIKNEQDPSLTFRRSCREGICGSCAMNINGQNTLACLCRIPTESASDVKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QYKSIQ +L
Sbjct: 131 PHTYVVKDLVPDLTHFYKQYKSIQPYL 157
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSIQP+L R
Sbjct: 126 KIYPLPHTYVVKDLVPDLTHFYKQYKSIQPYLQR 159
>gi|225703018|dbj|BAH30231.1| succinate dehydrogenase iron-sulfur protein subunit [Pholiota
nameko]
Length = 271
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/250 (53%), Positives = 161/250 (64%), Gaps = 52/250 (20%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
RSF S A S AVP +KP K F IYRWNPD+PD+KP +Q YK+DLN
Sbjct: 17 RSFATSIARSQAVPQQKPVLLKEFKIYRWNPDEPDKKPELQSYKIDLNQTGPMMLDALIK 76
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N++D K +KIYPLPHMYVVKD
Sbjct: 77 IKNEVDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDATKNAKIYPLPHMYVVKD 136
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPDM FY QYKSIQPWLQ + ++LQS +DR+KLDG+YECILCACCSTSCPSY
Sbjct: 137 LVPDMTLFYKQYKSIQPWLQ-NSSPPEKGEHLQSPEDRRKLDGMYECILCACCSTSCPSY 195
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT--RTCPKGL 290
WWN ++YLGPA LMQAYRWI DSRD++ A+R+++L++ S+YRCHTI NCT RTCPKGL
Sbjct: 196 WWNQDEYLGPATLMQAYRWIADSRDDRGAERMDRLQNEMSMYRCHTIFNCTCSRTCPKGL 255
Query: 291 NPGRAIAEIK 300
NP AIA++K
Sbjct: 256 NPAAAIAKMK 265
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID + K +KIYPL
Sbjct: 69 MMLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDATKNAKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM FY QYKSIQ PW
Sbjct: 129 PHMYVVKDLVPDMTLFYKQYKSIQ-----PW 154
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L +ID + K +KIYPLPHMYVVKDLVPDM FY QYKSIQPWL S
Sbjct: 110 ACLCRIDRDATKNAKIYPLPHMYVVKDLVPDMTLFYKQYKSIQPWLQNS 158
>gi|325095841|gb|EGC49151.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces capsulatus
H88]
Length = 283
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 165/282 (58%), Gaps = 56/282 (19%)
Query: 77 AQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPA-----KYKTFAIYRWN 131
A + R L + T A RS+ AS V P+ K KTF IYRWN
Sbjct: 2 ASLRPTSRLLAASRPLFRTSVAS--RSYATVEPASKVVDQSTPSTSQSPKLKTFKIYRWN 59
Query: 132 PDKPDEKPTMQEYKVDLNNK----IDA--------------------------------- 154
PDKP EKP M +Y +DLN +DA
Sbjct: 60 PDKPTEKPYMHDYTLDLNKTGPMVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGV 119
Query: 155 ------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQ 202
K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+LQRD + +
Sbjct: 120 NTLACLCRIPTETTKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTPSPDGRE 179
Query: 203 YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTAD 262
QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDEKT +
Sbjct: 180 IRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEKTEE 239
Query: 263 RLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
R L + SVYRCHTI+NCTRTCPKGLNPG AIAEIKK+++
Sbjct: 240 RKAHLDNSMSVYRCHTILNCTRTCPKGLNPGLAIAEIKKMMA 281
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 100/172 (58%), Gaps = 25/172 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K S+IYPL
Sbjct: 82 MVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------L 106
PH YVVKDLVPD+ FY QYKSI+ +L + + + IR L
Sbjct: 142 PHTYVVKDLVPDLTYFYKQYKSIKPYLQ---RDTPSPDGREIRQSPADRKKLDGLYECIL 198
Query: 107 SAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ E YRW D DEK +E K L+N +
Sbjct: 199 CACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEK--TEERKAHLDNSM 248
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 118 GVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 170
>gi|89573811|gb|ABD77131.1| succinate dehydrogenase complex subunit B [Dasypus novemcinctus]
Length = 237
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 162/238 (68%), Gaps = 51/238 (21%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------N 150
Q+ A +A A + K FAIYRW+PDK +KP MQ +++DLN N
Sbjct: 1 QVCRGAQTA--AATTPRVKKFAIYRWDPDKVGDKPHMQTFEIDLNKCGPMVLDALIKIKN 58
Query: 151 KIDAN-----------------------------------DKVSKIYPLPHMYVVKDLVP 175
+ID++ +KVSKIYPLPHMYV+KDLVP
Sbjct: 59 EIDSSLTFRRSCREGICGSCAMNINGNNTLACTQRIDTNLNKVSKIYPLPHMYVMKDLVP 118
Query: 176 DMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
D++NF+AQYKSI+P+L++ E+ QY+QSL+DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 119 DLSNFFAQYKSIEPYLKKKDESQKGTQYMQSLEDREKLDGLYECILCACCSTSCPSYWWN 178
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
G+KYLGPAVLMQAYRW+IDSRD+ A+RL +L+DPFS+YRCHTIMNCT TCPKGLN G
Sbjct: 179 GDKYLGPAVLMQAYRWMIDSRDDFRAERLAKLQDPFSLYRCHTIMNCTLTCPKGLNXG 236
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D +LTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 48 MVLDALIKIKNEIDSSLTFRRSCREGICGSCAMNINGNNTLACTQRIDTNLNKVSKIYPL 107
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NF+AQYKSI+ +L
Sbjct: 108 PHMYVMKDLVPDLSNFFAQYKSIEPYL 134
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N +KVSKIYPLPHMYV+KDLVPD++NF+AQYKSI+P+L +
Sbjct: 89 ACTQRIDTNLNKVSKIYPLPHMYVMKDLVPDLSNFFAQYKSIEPYLKK 136
>gi|239793134|dbj|BAH72989.1| iron-sulfur subunit of succinate dehydrogenase [Mortierella alpina]
Length = 272
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 161/245 (65%), Gaps = 50/245 (20%)
Query: 109 AASSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------- 150
A + + E PAK KTF IYRWNPD+P EKP +Q Y+VD+NN
Sbjct: 27 AIARSFATEAPAKKTKTFQIYRWNPDQPAEKPKLQSYEVDMNNCGPMVLDALIKIKNEID 86
Query: 151 -------------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNN 179
KI+ ++K +KIYPLPH YVVKDL+PD+
Sbjct: 87 PTLTFRRSCREGICGSCAMNIGGSNTLACICKIEVDNKPTKIYPLPHTYVVKDLIPDLTQ 146
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FYAQYKSI+P+L + K + LQ+++DRKKLDGLYECILCACCSTSCPSYWWN ++Y
Sbjct: 147 FYAQYKSIEPFL-KQKTPEPERENLQTIEDRKKLDGLYECILCACCSTSCPSYWWNSDQY 205
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPAVLMQAYRW+IDSRD+ +R L++PFS+YRCHTIMNC +TCPKGLNPG AIA+I
Sbjct: 206 LGPAVLMQAYRWMIDSRDQFGPERRQALQNPFSLYRCHTIMNCAKTCPKGLNPGLAIAQI 265
Query: 300 KKLLS 304
KK ++
Sbjct: 266 KKTMA 270
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 77/86 (89%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KI+ ++K +KIYPLP
Sbjct: 73 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGSNTLACICKIEVDNKPTKIYPLP 132
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YVVKDL+PD+ FYAQYKSI+ L
Sbjct: 133 HTYVVKDLIPDLTQFYAQYKSIEPFL 158
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + KI+ ++K +KIYPLPH YVVKDL+PD+ FYAQYKSI+P+L
Sbjct: 114 ACICKIEVDNKPTKIYPLPHTYVVKDLIPDLTQFYAQYKSIEPFL 158
>gi|154280707|ref|XP_001541166.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
gi|150411345|gb|EDN06733.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Ajellomyces capsulatus NAm1]
Length = 283
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 161/263 (61%), Gaps = 54/263 (20%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPA-----KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
LT+ RS+ +AS P+ + KTF IYRWNPDKP EKP M +Y +DLN
Sbjct: 19 LTSVASRSYATVESASKVADQSTPSTLQSPRLKTFKIYRWNPDKPTEKPYMHDYTLDLNK 78
Query: 151 K----IDA---------------------------------------------NDKVSKI 161
+DA K S+I
Sbjct: 79 TGPMVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRI 138
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECIL 221
YPLPH YVVKDLVPD+ FY QYKSI+P+LQRD + + QS DRKKLDGLYECIL
Sbjct: 139 YPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTPSPDGREIRQSPADRKKLDGLYECIL 198
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDEKT +R L + SVYRCHTI+N
Sbjct: 199 CACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEKTEERKAHLDNSMSVYRCHTILN 258
Query: 282 CTRTCPKGLNPGRAIAEIKKLLS 304
CTRTCPKGLNPG AIAEIKK+++
Sbjct: 259 CTRTCPKGLNPGLAIAEIKKMMA 281
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 100/172 (58%), Gaps = 25/172 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K S+IYPL
Sbjct: 82 MVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------L 106
PH YVVKDLVPD+ FY QYKSI+ +L + + + IR L
Sbjct: 142 PHTYVVKDLVPDLTYFYKQYKSIKPYLQ---RDTPSPDGREIRQSPADRKKLDGLYECIL 198
Query: 107 SAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ E YRW D DEK +E K L+N +
Sbjct: 199 CACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEK--TEERKAHLDNSM 248
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 118 GVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 170
>gi|70997740|ref|XP_753605.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus fumigatus Af293]
gi|66851241|gb|EAL91567.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus fumigatus Af293]
gi|159126661|gb|EDP51777.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Aspergillus fumigatus A1163]
Length = 299
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 156/239 (65%), Gaps = 50/239 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P++ P + K F +YRWNPDKP EKP MQ Y +DLN N+ID
Sbjct: 60 PSQAP-RIKKFHVYRWNPDKPTEKPKMQTYSLDLNKTGPMMLDALIRIKNEIDPTLTFRR 118
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
+ S+IYPLPH YVVKDLVPD+ FY QYK
Sbjct: 119 SCREGICGSCAMNIDGVNTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDLTYFYKQYK 178
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+P+LQRD + + QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L
Sbjct: 179 SIKPYLQRDTKTEDGLENRQSPEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAIL 238
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+Q+YRW+ DSRDEKTA+R + L + SVYRCHTI+NC+RTCPKGLNP RAIAEIKK+L+
Sbjct: 239 LQSYRWLADSRDEKTAERKHALDNSMSVYRCHTILNCSRTCPKGLNPARAIAEIKKMLA 297
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 98 MMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKQESRIYPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAK----------NIRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L K L + + L A
Sbjct: 158 PHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTKTEDGLENRQSPEDRKKLDGLYECILCAC 217
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D DEK +++ +D
Sbjct: 218 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKHALD 261
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 134 GVNTLACLCRIPTDTKQESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 186
>gi|320591824|gb|EFX04263.1| succinate dehydrogenase iron-sulfur mitochondrial precursor
[Grosmannia clavigera kw1407]
Length = 289
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 49/250 (19%)
Query: 104 FQLSAAASSAVPAEKPAKY-KTFAIYRWNPDKPDEKPTMQEYKVDLNN------------ 150
F S + ++V ++PA KTF IYRW+PDKP EKP M+ Y +DLN
Sbjct: 39 FSQSVRSMASVSTDEPAPLIKTFQIYRWSPDKPTEKPHMETYSLDLNKTGPMMLDALIRI 98
Query: 151 ------------------------------------KIDANDKVSKIYPLPHMYVVKDLV 174
+I + +K+YPLPH YVVKDLV
Sbjct: 99 KNEQDSSLTFRRSCREGICGSCAMNINGVNTLACLCRIPRDTTEAKVYPLPHTYVVKDLV 158
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ + Y QYKSI+P+LQR +YLQS +DRKKLDGLYECILC CCSTSCPSYWW
Sbjct: 159 PDLTHLYKQYKSIKPYLQRTTPAPDGKEYLQSKEDRKKLDGLYECILCFCCSTSCPSYWW 218
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRDEK A+RL ++ S+YRCHTI+NCTRTCPKGLNPGR
Sbjct: 219 NSEEYLGPAILLQSYRWLADSRDEKKAERLQYFQNSMSLYRCHTILNCTRTCPKGLNPGR 278
Query: 295 AIAEIKKLLS 304
AIAEIKK +S
Sbjct: 279 AIAEIKKQMS 288
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 72/86 (83%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALI+IKNE D +LTFRRSCREGICGSCAMNI GVNTLAC+ +I + +K+YPLP
Sbjct: 90 MMLDALIRIKNEQDSSLTFRRSCREGICGSCAMNINGVNTLACLCRIPRDTTEAKVYPLP 149
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YVVKDLVPD+ + Y QYKSI+ +L
Sbjct: 150 HTYVVKDLVPDLTHLYKQYKSIKPYL 175
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + +K+YPLPH YVVKDLVPD+ + Y QYKSI+P+L R+
Sbjct: 126 GVNTLACLCRIPRDTTEAKVYPLPHTYVVKDLVPDLTHLYKQYKSIKPYLQRT 178
>gi|89573813|gb|ABD77132.1| succinate dehydrogenase complex subunit B [Tamandua tetradactyla]
Length = 236
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/241 (53%), Positives = 162/241 (67%), Gaps = 54/241 (22%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
++F+ A + P + K FAIYRW+PDK +KP MQ +++DLN
Sbjct: 1 QAFRGVQTAVATTP-----RIKKFAIYRWDPDKAGDKPHMQTFEIDLNKCGPMVLDALIK 55
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N++DA+ +KVSKIYPLPHMYV+KD
Sbjct: 56 IKNEVDASLTFRRSCREGICGSCAMNINGNNTLACTQRIDTNLNKVSKIYPLPHMYVIKD 115
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD++NF+AQYKSI+P+L++ E+ QY QSL+DR+KLDGLYECILCACCSTSCPSY
Sbjct: 116 LVPDLSNFFAQYKSIEPYLKKKDESQKGKQYTQSLEDREKLDGLYECILCACCSTSCPSY 175
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWNG+KYLGPAVLMQAYRW+IDSRD+ A+RL +L+DPFS+YRCHTIMNCT TCPKGLN
Sbjct: 176 WWNGDKYLGPAVLMQAYRWMIDSRDDFRAERLAKLQDPFSLYRCHTIMNCTLTCPKGLNX 235
Query: 293 G 293
G
Sbjct: 236 G 236
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D +LTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 48 MVLDALIKIKNEVDASLTFRRSCREGICGSCAMNINGNNTLACTQRIDTNLNKVSKIYPL 107
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NF+AQYKSI+ +L
Sbjct: 108 PHMYVIKDLVPDLSNFFAQYKSIEPYL 134
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N +KVSKIYPLPHMYV+KDLVPD++NF+AQYKSI+P+L +
Sbjct: 89 ACTQRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFFAQYKSIEPYLKK 136
>gi|429859909|gb|ELA34665.1| succinate dehydrogenase iron-sulfur protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 276
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 161/269 (59%), Gaps = 57/269 (21%)
Query: 91 KILGTLTAKNIRSFQLSAAASSAVPAEKPA----KYKTFAIYRWNPDKPDEKPTMQEYKV 146
++LGT T R A P + PA K K F IYRWNPD P EKP MQEY +
Sbjct: 9 RVLGTATKAAFRPIVTIPRRGLATPTDAPAVKEPKMKKFTIYRWNPDTPTEKPRMQEYTL 68
Query: 147 DLN--------------NKID-------------------------------------AN 155
DLN N+ID A+
Sbjct: 69 DLNKTGPMMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTESAS 128
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
D K+YPLPH YVVKDLVPD+ FY QY+SI+P+LQRD +Y QS+ DRKKL G
Sbjct: 129 D--VKVYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQRDTPAPDGKEYRQSVADRKKLSG 186
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+ A+R L + S+YR
Sbjct: 187 LYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERKAERKAALDNSMSLYR 246
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
CHTI+NCTR CPKGLNPG+AIAEIKK ++
Sbjct: 247 CHTILNCTRACPKGLNPGKAIAEIKKAMA 275
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I K+YPL
Sbjct: 76 MMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTESASDVKVYPL 135
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QY+SI+ +L
Sbjct: 136 PHTYVVKDLVPDLTQFYKQYRSIKPYL 162
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K+YPLPH YVVKDLVPD+ FY QY+SI+P+L R
Sbjct: 131 KVYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQR 164
>gi|148681386|gb|EDL13333.1| succinate dehydrogenase complex, subunit B, iron sulfur (Ip),
isoform CRA_c [Mus musculus]
Length = 386
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/252 (53%), Positives = 162/252 (64%), Gaps = 56/252 (22%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKV 146
G P +LG + Q A + A + K FAIYRW+PDK +KP MQ Y+V
Sbjct: 12 GFPAAVLGRV------GLQFQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPRMQTYEV 65
Query: 147 DLN--------------NKIDAN-----------------------------------DK 157
DLN N++D+ K
Sbjct: 66 DLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSK 125
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGL 216
VSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGL
Sbjct: 126 VSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGL 185
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFSVYRC
Sbjct: 186 YECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSVYRC 245
Query: 277 HTIMNCTRTCPK 288
HTIMNCT+TCPK
Sbjct: 246 HTIMNCTQTCPK 257
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
>gi|260944932|ref|XP_002616764.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Clavispora lusitaniae ATCC 42720]
gi|238850413|gb|EEQ39877.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Clavispora lusitaniae ATCC 42720]
Length = 259
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 158/248 (63%), Gaps = 54/248 (21%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
+ A++A P K K F IYRWNPD P+ P MQ Y++DLN
Sbjct: 15 MRTLATAASP-----KIKKFQIYRWNPDTPEVAPKMQTYEIDLNACGPMVLDALLKIKNE 69
Query: 151 ---------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPD 176
KIDAN K +KIYPLPHMY+V+DLVPD
Sbjct: 70 QDSTLTFRRSCREGICGSCAMNIGGVNTLACLCKIDANTSKDTKIYPLPHMYIVRDLVPD 129
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ +FY QYKSIQP+LQRD + LQS++DR KLDGLYECILCACCSTSCPSYWWN
Sbjct: 130 LTHFYKQYKSIQPYLQRDDHPADGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQ 189
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
++YLGPAVLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNC+RTCPKGLNPGRAI
Sbjct: 190 QQYLGPAVLMQAYRWLIDSRDQASKFRKEMLQNSMSLYRCHTIMNCSRTCPKGLNPGRAI 249
Query: 297 AEIKKLLS 304
AEIKK L+
Sbjct: 250 AEIKKQLA 257
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGGVNTLAC+ KIDAN K +KIYPL
Sbjct: 58 MVLDALLKIKNEQDSTLTFRRSCREGICGSCAMNIGGVNTLACLCKIDANTSKDTKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+V+DLVPD+ +FY QYKSIQ +L
Sbjct: 118 PHMYIVRDLVPDLTHFYKQYKSIQPYL 144
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L KIDAN K +KIYPLPHMY+V+DLVPD+ +FY QYKSIQP+L R
Sbjct: 94 GVNTLACLCKIDANTSKDTKIYPLPHMYIVRDLVPDLTHFYKQYKSIQPYLQR 146
>gi|302689769|ref|XP_003034564.1| Iron-sulfur subunit protein of succinate dehydrogenase
[Schizophyllum commune H4-8]
gi|300108259|gb|EFI99661.1| Iron-sulfur subunit protein of succinate dehydrogenase
[Schizophyllum commune H4-8]
Length = 271
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/253 (52%), Positives = 156/253 (61%), Gaps = 50/253 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
R F SA + AVP +KP K K F IYRWNPD+P +KPT+Q Y +DLN
Sbjct: 19 RGFATSALRAQAVPTDKPVKAKEFKIYRWNPDEPAKKPTLQSYTIDLNQCGPMVLDALIK 78
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N+ID K +KIYPLPHMY+VKD
Sbjct: 79 IKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIERDESKDTKIYPLPHMYIVKD 138
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ FY QYKSIQP+LQ D ++LQS +DR+KLDGLYECILCACCSTSCPSY
Sbjct: 139 LVPDLTYFYKQYKSIQPYLQNDNPP-AEGEFLQSQEDRRKLDGLYECILCACCSTSCPSY 197
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPA LMQAYRW+ DSRD A R +L++ SVYRCHTI NC RTCPKGLNP
Sbjct: 198 WWNQDQYLGPATLMQAYRWLADSRDSYGAQRRERLQNEMSVYRCHTIFNCARTCPKGLNP 257
Query: 293 GRAIAEIKKLLSG 305
AIA+IK L+
Sbjct: 258 AAAIAKIKMELAA 270
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I+ ++ K +KIYPL
Sbjct: 71 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIERDESKDTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSIQ +L
Sbjct: 131 PHMYIVKDLVPDLTYFYKQYKSIQPYL 157
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +I+ ++ K +KIYPLPHMY+VKDLVPD+ FY QYKSIQP+L
Sbjct: 112 ACLCRIERDESKDTKIYPLPHMYIVKDLVPDLTYFYKQYKSIQPYL 157
>gi|50286849|ref|XP_445854.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525160|emb|CAG58773.1| unnamed protein product [Candida glabrata]
Length = 256
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 160/250 (64%), Gaps = 50/250 (20%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------- 150
L + + E P + KTF IYRWNPD+P+ KP +QE+KVDLN
Sbjct: 7 LSLGISGRRLMSTEAP-RLKTFKIYRWNPDQPEVKPKLQEFKVDLNECGPMVLDALLKIK 65
Query: 151 -----------------------------------KIDAN-DKVSKIYPLPHMYVVKDLV 174
KID + K +KIYPLPHM++VKDLV
Sbjct: 66 DEQDASLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQDTSKQAKIYPLPHMFIVKDLV 125
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ NFY QYKSI+P+LQR + LQS++DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 126 PDLTNFYQQYKSIKPYLQRKDYPADGKEVLQSIEDRKKLDGLYECILCACCSTSCPSYWW 185
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPAVLMQAYRW++DSRD+ T +R + L + S+YRCHTIMNCT+TCPKGLNPG
Sbjct: 186 NQEEYLGPAVLMQAYRWLVDSRDQATQERKDMLNNSMSLYRCHTIMNCTKTCPKGLNPGE 245
Query: 295 AIAEIKKLLS 304
+IA+IK+ L+
Sbjct: 246 SIAKIKQQLA 255
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 104/169 (61%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIK+E D +LTFRRSCREGICGSCAMNIGG NTLAC+ KID + K +KIYPL
Sbjct: 56 MVLDALLKIKDEQDASLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQDTSKQAKIYPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL------GGPWKILGTLTAK----NIRSFQLSAA 109
PHM++VKDLVPD+ NFY QYKSI+ +L ++L ++ + + L A
Sbjct: 116 PHMFIVKDLVPDLTNFYQQYKSIKPYLQRKDYPADGKEVLQSIEDRKKLDGLYECILCAC 175
Query: 110 ASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ E YRW D D+ QE K LNN +
Sbjct: 176 CSTSCPSYWWNQEEYLGPAVLMQAYRWLVDSRDQ--ATQERKDMLNNSM 222
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID + K +KIYPLPHM++VKDLVPD+ NFY QYKSI+P+L R
Sbjct: 97 ACLCKIDQDTSKQAKIYPLPHMFIVKDLVPDLTNFYQQYKSIKPYLQR 144
>gi|171687223|ref|XP_001908552.1| hypothetical protein [Podospora anserina S mat+]
gi|170943573|emb|CAP69225.1| unnamed protein product [Podospora anserina S mat+]
Length = 285
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/249 (53%), Positives = 156/249 (62%), Gaps = 49/249 (19%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------N 150
QL+ AA A + A KTF IYRWNPD+P EKP MQ Y +DLN N
Sbjct: 36 QLADAAQQNNTASEQANLKTFQIYRWNPDQPSEKPKMQSYTLDLNKTGPMVLDALIRIKN 95
Query: 151 KIDAN----------------------------------DKVS-KIYPLPHMYVVKDLVP 175
+ID DK KIYPLPH YVVKDLVP
Sbjct: 96 EIDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPNEDKADMKIYPLPHTYVVKDLVP 155
Query: 176 DMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
D+ FY QYKSI+P+LQRD +Y Q+ DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 156 DLTQFYKQYKSIKPYLQRDTPAPDGREYRQTKADRKKLDGLYECILCACCSTSCPSYWWN 215
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
E+YLGPA+L+Q+YRW++DSRDEKT R + L + S+YRCHTI+NCTRTCPKGLNPG+A
Sbjct: 216 SEEYLGPAILLQSYRWLVDSRDEKTLQRQDALNNSMSLYRCHTILNCTRTCPKGLNPGQA 275
Query: 296 IAEIKKLLS 304
I IKK ++
Sbjct: 276 IQSIKKQMA 284
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I DK KIYPL
Sbjct: 85 MVLDALIRIKNEIDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPNEDKADMKIYPL 144
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 145 PHTYVVKDLVPDLTQFYKQYKSIKPYL 171
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 26/123 (21%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 72 MQSYTLDLNKTGPMVLDALIRIKNEIDPTLTFR--------RSCREGI------------ 111
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A L +I DK KIYPLPH YVVKDLVPD+ FY QYKSI+P+
Sbjct: 112 -CGSCAMNINGTNTLACLCRIPNEDKADMKIYPLPHTYVVKDLVPDLTQFYKQYKSIKPY 170
Query: 361 LPR 363
L R
Sbjct: 171 LQR 173
>gi|169864529|ref|XP_001838873.1| succinate dehydrogenase iron-sulfur subunit [Coprinopsis cinerea
okayama7#130]
gi|116500093|gb|EAU82988.1| succinate dehydrogenase iron-sulfur subunit [Coprinopsis cinerea
okayama7#130]
gi|168488020|gb|ACA25433.1| succinate dehydrogenase [Coprinopsis cinerea]
Length = 266
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 157/250 (62%), Gaps = 50/250 (20%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------- 150
+L+ A + A EKP K F IYRWNPDKP+EKP ++ YK+DLN
Sbjct: 17 RLTLARTLATATEKPVLLKEFKIYRWNPDKPEEKPKLESYKIDLNQTGPMILDALIKIKN 76
Query: 151 ----------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVP 175
+ID N K +KIYPLPHMY+VKDLVP
Sbjct: 77 EVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNASKDTKIYPLPHMYIVKDLVP 136
Query: 176 DMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
DM FY QYKSIQPWLQ D ++LQS +DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 137 DMTQFYKQYKSIQPWLQNDNPP-EKGEHLQSPEDRKKLDGLYECILCACCSTSCPSYWWN 195
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
++YLGPA LMQAYRWI DSRD T +R ++L++ S+YRCHTI NC+RTCPKGLNP A
Sbjct: 196 QDEYLGPATLMQAYRWIADSRDTHTEERKDRLQNEMSMYRCHTIFNCSRTCPKGLNPAAA 255
Query: 296 IAEIKKLLSG 305
IA+IK L+
Sbjct: 256 IAKIKLELAA 265
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N K +KIYPL
Sbjct: 66 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNASKDTKIYPL 125
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPDM FY QYKSIQ PW
Sbjct: 126 PHMYIVKDLVPDMTQFYKQYKSIQ-----PW 151
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID N K +KIYPLPHMY+VKDLVPDM FY QYKSIQPWL
Sbjct: 107 ACLCRIDRNASKDTKIYPLPHMYIVKDLVPDMTQFYKQYKSIQPWL 152
>gi|392578342|gb|EIW71470.1| hypothetical protein TREMEDRAFT_42851 [Tremella mesenterica DSM
1558]
Length = 282
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 158/249 (63%), Gaps = 50/249 (20%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+RSF S + A PAE+PA+ K F IYRWNPD P EKPT+Q YKVDL+
Sbjct: 27 VRSFNASQSRGFAQPAERPAQLKEFKIYRWNPDTPAEKPTLQSYKVDLSQCGPMMLDALI 86
Query: 150 ---NKIDAN-----------------------------------DKVSKIYPLPHMYVVK 171
N++D K SK+YPLPHMYVVK
Sbjct: 87 KIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKDTSKTSKVYPLPHMYVVK 146
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ FY QYKSI+P+L+ D ++LQS ++RKKLDG+YECILCACCSTSCPS
Sbjct: 147 DLVPDLTLFYKQYKSIEPFLKNDNPP-AQGEFLQSPEERKKLDGMYECILCACCSTSCPS 205
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN ++YLGPAVLMQAYRW+ DSRD ADR ++++ S+YRCHTI NC RTCPKGLN
Sbjct: 206 YWWNQDQYLGPAVLMQAYRWMADSRDSYGADRKEKMQNSMSLYRCHTIFNCARTCPKGLN 265
Query: 292 PGRAIAEIK 300
P AIA++K
Sbjct: 266 PAMAIAKMK 274
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +ID + K SK+YPL
Sbjct: 80 MMLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKDTSKTSKVYPL 139
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ FY QYKSI+ L
Sbjct: 140 PHMYVVKDLVPDLTLFYKQYKSIEPFL 166
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID + K SK+YPLPHMYVVKDLVPD+ FY QYKSI+P+L
Sbjct: 116 GVNTLACLCRIDKDTSKTSKVYPLPHMYVVKDLVPDLTLFYKQYKSIEPFL 166
>gi|342873584|gb|EGU75748.1| hypothetical protein FOXB_13767 [Fusarium oxysporum Fo5176]
Length = 278
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 158/250 (63%), Gaps = 49/250 (19%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS 159
F S A+ S P + A K+F IYRWNPD P EKP +Q Y +DLN +DA ++
Sbjct: 26 FTRSMASVSEPPKDSDANLKSFQIYRWNPDTPSEKPRLQTYTLDLNKTGPMILDALIRIK 85
Query: 160 ---------------------------------------------KIYPLPHMYVVKDLV 174
KIYPLPH YVVKDLV
Sbjct: 86 NELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTEAASDVKIYPLPHTYVVKDLV 145
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ +FY QYKSI+P+LQRD +Y Q+ +DR+KLDGLYECILCACCSTSCPSYWW
Sbjct: 146 PDLTHFYKQYKSIKPYLQRDTPAEDGKEYRQTKEDRRKLDGLYECILCACCSTSCPSYWW 205
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRDE+TA+R L++ S+YRCHTI+NCTR CPKGLNPG+
Sbjct: 206 NSEEYLGPAILLQSYRWLADSRDERTAERKTNLENSMSLYRCHTILNCTRACPKGLNPGK 265
Query: 295 AIAEIKKLLS 304
AIAEIKK ++
Sbjct: 266 AIAEIKKQMA 275
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 104/170 (61%), Gaps = 21/170 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI--DANDKVSKIYP 58
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I +A V KIYP
Sbjct: 76 MILDALIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTEAASDV-KIYP 134
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL--------GGPWKILGTLTAK--NIRSFQLSA 108
LPH YVVKDLVPD+ +FY QYKSI+ +L G ++ K + L A
Sbjct: 135 LPHTYVVKDLVPDLTHFYKQYKSIKPYLQRDTPAEDGKEYRQTKEDRRKLDGLYECILCA 194
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ +Y AI YRW D DE+ E K +L N +
Sbjct: 195 CCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDER--TAERKTNLENSM 242
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 131 KIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 164
>gi|448527153|ref|XP_003869443.1| Sdh2 Fe-S subunit of succinate dehydrogenase [Candida orthopsilosis
Co 90-125]
gi|380353796|emb|CCG23308.1| Sdh2 Fe-S subunit of succinate dehydrogenase [Candida
orthopsilosis]
Length = 257
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 160/250 (64%), Gaps = 49/250 (19%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
+ S + + V EK + K F IYRWNPD P+ +P M+EY+VDLN
Sbjct: 6 LRRSVRSLATVAEEKTPRLKKFQIYRWNPDTPEVQPKMKEYEVDLNKCGPMVLDALLKIK 65
Query: 150 NKIDAN-----------------------------------DKVSKIYPLPHMYVVKDLV 174
N+ DA K +KIYPLPHM+VV+DLV
Sbjct: 66 NEEDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDTKIYPLPHMFVVRDLV 125
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ +FY QYKSI+P+LQR+ + + LQS+ DR KLDGLYECILCACCSTSCPSYWW
Sbjct: 126 PDLTHFYKQYKSIEPYLQREDQPADGRENLQSIADRAKLDGLYECILCACCSTSCPSYWW 185
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N ++YLGPAVLMQAYRW+IDSRD+ +A R L++ S+YRCHTIMNC RTCPKGLNPGR
Sbjct: 186 NQQQYLGPAVLMQAYRWLIDSRDQASAKRKAMLQNSMSLYRCHTIMNCARTCPKGLNPGR 245
Query: 295 AIAEIKKLLS 304
AIAEIKK ++
Sbjct: 246 AIAEIKKQMA 255
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ +ID + K +KIYPL
Sbjct: 56 MVLDALLKIKNEEDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDTKIYPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 116 PHMFVVRDLVPDLTHFYKQYKSIEPYL 142
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L +ID + K +KIYPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 97 ACLCRIDTDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQRE 145
>gi|367052907|ref|XP_003656832.1| hypothetical protein THITE_2122016 [Thielavia terrestris NRRL 8126]
gi|347004097|gb|AEO70496.1| hypothetical protein THITE_2122016 [Thielavia terrestris NRRL 8126]
Length = 286
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/247 (53%), Positives = 157/247 (63%), Gaps = 50/247 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS--- 159
A S+ E+P K KTF +YRWNPD P EKP MQ Y +DLN +DA ++
Sbjct: 40 GAQHSTTASGEQP-KLKTFQVYRWNPDTPTEKPRMQSYTLDLNKTGPMVLDALIRIKNEL 98
Query: 160 ------------------------------------------KIYPLPHMYVVKDLVPDM 177
KIYPLPH YVVKDLVPD+
Sbjct: 99 DPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTESSADIKIYPLPHTYVVKDLVPDL 158
Query: 178 NNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
+FY QYKSI+P+LQRD + +Y QS DRKKLDGLYECILCACCSTSCPSYWWN E
Sbjct: 159 THFYKQYKSIKPYLQRDTPSPDGKEYRQSKADRKKLDGLYECILCACCSTSCPSYWWNSE 218
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
+YLGPA+L+Q+YRW+ DSRDEKTA+R + L + S+YRCHTI+NCTRTCPKGLNPG AIA
Sbjct: 219 EYLGPAILLQSYRWLADSRDEKTAERRDALNNSMSLYRCHTILNCTRTCPKGLNPGLAIA 278
Query: 298 EIKKLLS 304
+IKK ++
Sbjct: 279 QIKKEMA 285
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 101/169 (59%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I KIYPL
Sbjct: 86 MVLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTESSADIKIYPL 145
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL--------GGPWKILGTLTAK--NIRSFQLSAA 109
PH YVVKDLVPD+ +FY QYKSI+ +L G ++ K + L A
Sbjct: 146 PHTYVVKDLVPDLTHFYKQYKSIKPYLQRDTPSPDGKEYRQSKADRKKLDGLYECILCAC 205
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ +Y AI YRW D DEK E + LNN +
Sbjct: 206 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEK--TAERRDALNNSM 252
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 141 KIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 174
>gi|242796239|ref|XP_002482757.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Talaromyces stipitatus ATCC 10500]
gi|218719345|gb|EED18765.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Talaromyces stipitatus ATCC 10500]
Length = 297
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 157/244 (64%), Gaps = 54/244 (22%)
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN 155
A SA P + KTF +YRW+PD P EKP MQ Y +DLN N++D
Sbjct: 58 APSATP-----RTKTFHVYRWDPDTPSEKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPT 112
Query: 156 -----------------------------------DKVSKIYPLPHMYVVKDLVPDMNNF 180
K S+IYPLPH YVVKDLVPD+ +F
Sbjct: 113 LTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTHF 172
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
Y QYKSI+P+LQRD + + QS+++R+KLDGLYECILCACCSTSCPSYWWN E+YL
Sbjct: 173 YKQYKSIKPYLQRDTKTEDGLENRQSIEERRKLDGLYECILCACCSTSCPSYWWNSEEYL 232
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+Q+YRW+ DSRDEKT +R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIK
Sbjct: 233 GPAILLQSYRWLADSRDEKTEERKAALNNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIK 292
Query: 301 KLLS 304
K+++
Sbjct: 293 KMMA 296
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 108/171 (63%), Gaps = 23/171 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 97 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 156
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LS 107
PH YVVKDLVPD+ +FY QYKSI+ +L K L +N +S + L
Sbjct: 157 PHTYVVKDLVPDLTHFYKQYKSIKPYLQRDTKTEDGL--ENRQSIEERRKLDGLYECILC 214
Query: 108 AAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ +Y AI YRW D DEK +E K LNN +
Sbjct: 215 ACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEK--TEERKAALNNSM 263
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 133 GVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 185
>gi|89573817|gb|ABD77134.1| succinate dehydrogenase complex subunit B [Rattus norvegicus]
Length = 232
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 153/218 (70%), Gaps = 50/218 (22%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ KTFAIYRW+PDK +KP MQ YKVDLN N+ID+
Sbjct: 15 RIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGI 74
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L
Sbjct: 75 CGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYL 134
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 135 KKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 194
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
W+IDSRDE T +RL +L+DPFS+YRCHTIMNCT+TCPK
Sbjct: 195 WMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPK 232
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 102/155 (65%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 48 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 107
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-------GPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L G + L ++ + + L A
Sbjct: 108 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 167
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY A+ YRW D DE
Sbjct: 168 CCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDE 202
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y W+ +K G MQ Y+ ++ D L ++K+ + + R+C +G+
Sbjct: 22 YRWDPDK-AGDKPRMQTYKVDLNKCGPMVLDALIKIKNEID-----STLTFRRSCREGIC 75
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNF 350
A+ ++G G A +ID + KVSKIYPLPHMYV+KDLVPD++NF
Sbjct: 76 GSCAMN-----ING-------GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNF 123
Query: 351 YAQYKSIQPWLPR 363
YAQYKSI+P+L +
Sbjct: 124 YAQYKSIEPYLKK 136
>gi|212536612|ref|XP_002148462.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Talaromyces marneffei ATCC 18224]
gi|210070861|gb|EEA24951.1| iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative [Talaromyces marneffei ATCC 18224]
Length = 297
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 157/244 (64%), Gaps = 54/244 (22%)
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN 155
A SA P + KTF +YRW+PD P EKP MQ Y +DLN N++D
Sbjct: 58 APSATP-----RTKTFHVYRWDPDTPSEKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPT 112
Query: 156 -----------------------------------DKVSKIYPLPHMYVVKDLVPDMNNF 180
K S+IYPLPH YVVKDLVPD+ +F
Sbjct: 113 LTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTHF 172
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
Y QYKSI+P+LQRD + + QS++DR+KLDGLYECILCACCSTSCPSYWWN E+YL
Sbjct: 173 YKQYKSIKPYLQRDSKPEDGLENRQSIEDRRKLDGLYECILCACCSTSCPSYWWNSEEYL 232
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+Q+YRW+ DSRD+KT +R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIK
Sbjct: 233 GPAILLQSYRWLADSRDQKTEERKAALNNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIK 292
Query: 301 KLLS 304
K+L+
Sbjct: 293 KMLA 296
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 108/171 (63%), Gaps = 23/171 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 97 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 156
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LS 107
PH YVVKDLVPD+ +FY QYKSI+ +L K L +N +S + L
Sbjct: 157 PHTYVVKDLVPDLTHFYKQYKSIKPYLQRDSKPEDGL--ENRQSIEDRRKLDGLYECILC 214
Query: 108 AAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ +Y AI YRW D D+K +E K LNN +
Sbjct: 215 ACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQK--TEERKAALNNSM 263
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 133 GVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 185
>gi|340515867|gb|EGR46118.1| succinate dehydrogenase [Trichoderma reesei QM6a]
Length = 275
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 127/248 (51%), Positives = 159/248 (64%), Gaps = 49/248 (19%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS-- 159
+ + ++ E+ + K+F IYRWNPD P EKP +Q Y +DLN +DA K+
Sbjct: 25 FARSMATVSETEQQPRIKSFQIYRWNPDTPTEKPRLQTYSIDLNKTGPMILDALIKIKNE 84
Query: 160 -------------------------------------------KIYPLPHMYVVKDLVPD 176
KIYPLPH YVVKDLVPD
Sbjct: 85 QDPSLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSSDVKIYPLPHTYVVKDLVPD 144
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ +FY QYKSI+P+LQRD +Y QS DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 145 LTHFYKQYKSIEPYLQRDTPAEDGKEYRQSKADRKKLDGLYECILCACCSTSCPSYWWNS 204
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPA+L+Q+YRW++DSRDE+TA R ++L++ S+YRCHTI+NCTRTCPKGLNPG+AI
Sbjct: 205 EEYLGPAILLQSYRWLVDSRDERTAARKSKLENSMSLYRCHTILNCTRTCPKGLNPGKAI 264
Query: 297 AEIKKLLS 304
AEIKK ++
Sbjct: 265 AEIKKQMA 272
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALIKIKNE DP+LTFRRSCREGICGSCAMNI G NTLAC+ +I A KIYPL
Sbjct: 73 MILDALIKIKNEQDPSLTFRRSCREGICGSCAMNINGQNTLACLCRIPAESSSDVKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 133 PHTYVVKDLVPDLTHFYKQYKSIEPYL 159
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I A KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 114 ACLCRIPAESSSDVKIYPLPHTYVVKDLVPDLTHFYKQYKSIEPYLQR 161
>gi|380470439|emb|CCF47739.1| succinate dehydrogenase iron-sulfur subunit [Colletotrichum
higginsianum]
Length = 277
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 161/268 (60%), Gaps = 54/268 (20%)
Query: 91 KILGTLTAKNIRSF-----QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYK 145
++LG+ T R + A S VP K + K F IYRWNPD P EKP MQEY
Sbjct: 9 RVLGSATKATFRPAVTVPRRGLATPSDRVPRTKEPEMKKFTIYRWNPDTPTEKPRMQEYT 68
Query: 146 VDLNNK----IDANDKVS------------------------------------------ 159
+DLN +DA ++
Sbjct: 69 LDLNKTGPMMLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPKESS 128
Query: 160 ---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K+YPLPH YVVKDLVPD+ FY QY+SI+P+LQRD +Y QS+ DRKKL GL
Sbjct: 129 SDVKVYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQRDTPAPDGKEYRQSVADRKKLSGL 188
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDEKTA+R L + S+YRC
Sbjct: 189 YECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKTAERKAALDNSMSLYRC 248
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTI+NCTR CPKGLNPG+AIAEIKK ++
Sbjct: 249 HTILNCTRACPKGLNPGKAIAEIKKQMA 276
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 97/169 (57%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I K+YPL
Sbjct: 77 MMLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPKESSSDVKVYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI----QRHLGGP------WKILGTLTAKNIRSFQLSAA 109
PH YVVKDLVPD+ FY QY+SI QR P + + L A
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYRSIKPYLQRDTPAPDGKEYRQSVADRKKLSGLYECILCAC 196
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ +Y AI YRW D DEK E K L+N +
Sbjct: 197 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEK--TAERKAALDNSM 243
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K+YPLPH YVVKDLVPD+ FY QY+SI+P+L R
Sbjct: 132 KVYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQR 165
>gi|240273353|gb|EER36874.1| succinate dehydrogenase iron-sulphur protein [Ajellomyces
capsulatus H143]
Length = 283
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/282 (49%), Positives = 164/282 (58%), Gaps = 56/282 (19%)
Query: 77 AQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPA-----KYKTFAIYRWN 131
A + R L + T A RS+ AS P+ + KTF IYRWN
Sbjct: 2 ASLRPTSRLLAASRPLFRTSVAS--RSYATVEPASKVADQSTPSTSQSPRLKTFKIYRWN 59
Query: 132 PDKPDEKPTMQEYKVDLNNK----IDA--------------------------------- 154
PDKP EKP M +Y +DLN +DA
Sbjct: 60 PDKPTEKPYMHDYTLDLNKTGPMVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGV 119
Query: 155 ------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQ 202
K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+LQRD + +
Sbjct: 120 NTLACLCRIPTETTKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTPSPDGRE 179
Query: 203 YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTAD 262
QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDEKT +
Sbjct: 180 IRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEKTEE 239
Query: 263 RLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
R L + SVYRCHTI+NCTRTCPKGLNPG AIAEIKK+++
Sbjct: 240 RKAHLDNSMSVYRCHTILNCTRTCPKGLNPGLAIAEIKKMMA 281
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 100/172 (58%), Gaps = 25/172 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K S+IYPL
Sbjct: 82 MVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------L 106
PH YVVKDLVPD+ FY QYKSI+ +L + + + IR L
Sbjct: 142 PHTYVVKDLVPDLTYFYKQYKSIKPYLQ---RDTPSPDGREIRQSPADRKKLDGLYECIL 198
Query: 107 SAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ E YRW D DEK +E K L+N +
Sbjct: 199 CACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEK--TEERKAHLDNSM 248
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 118 GVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 170
>gi|320165276|gb|EFW42175.1| succinate dehydrogenase iron-sulfur subunit [Capsaspora owczarzaki
ATCC 30864]
Length = 285
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/235 (57%), Positives = 153/235 (65%), Gaps = 50/235 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ KTFAIYRW+P+ P KP +Q Y+VDLN N ID
Sbjct: 50 RLKTFAIYRWDPENPTVKPRLQNYQVDLNTCGPMVLDALIKIKNDIDPTLTFRRSCREGI 109
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K KIYPLPHMYVVKDLVPDM+NFY QY+ I+P+L
Sbjct: 110 CGSCSMNIGGSNTLACISHIDPDLSKPVKIYPLPHMYVVKDLVPDMSNFYQQYRRIEPYL 169
Query: 192 QRDKENIGNA-QYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
QR A + LQS DRKKLDGLYECILCACCSTSCPSYWWN ++YLGPAVLMQAYR
Sbjct: 170 QRKTPAPDAAKENLQSRADRKKLDGLYECILCACCSTSCPSYWWNSDQYLGPAVLMQAYR 229
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
WIIDSRDE A+RL +L+DPFS+YRCHTIMNCT+TCPKGLNP RAIA IKK L+
Sbjct: 230 WIIDSRDEFKAERLAKLQDPFSLYRCHTIMNCTKTCPKGLNPARAIAMIKKELAN 284
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKN++DPTLTFRRSCREGICGSC+MNIGG NTLACIS ID + K KIYPL
Sbjct: 83 MVLDALIKIKNDIDPTLTFRRSCREGICGSCSMNIGGSNTLACISHIDPDLSKPVKIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFY QY+ I+ +L
Sbjct: 143 PHMYVVKDLVPDMSNFYQQYRRIEPYL 169
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID + K KIYPLPHMYVVKDLVPDM+NFY QY+ I+P+L R
Sbjct: 124 ACISHIDPDLSKPVKIYPLPHMYVVKDLVPDMSNFYQQYRRIEPYLQR 171
>gi|189193841|ref|XP_001933259.1| succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978823|gb|EDU45449.1| succinate dehydrogenase iron-sulfur subunit, mitochondrial
precursor [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 306
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 155/246 (63%), Gaps = 52/246 (21%)
Query: 111 SSAVPAEKP---AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID 153
+S VP P AK KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 59 TSTVPEPSPSKDAKTKTFHIYRWNPDEPTSKPKMQSYTLDLNKTGPMMLDALIRIKNEVD 118
Query: 154 AN-----------------------------------DKVSKIYPLPHMYVVKDLVPDMN 178
K S+IYPLPHMYVVKDLVPDM
Sbjct: 119 PTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMT 178
Query: 179 NFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FY QY+S++P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+
Sbjct: 179 LFYKQYRSVKPYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEE 238
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPAVL+Q+YRWI DSRDEK A+R + L + S+YRCHTI+NC+RTCPKGLNP AIAE
Sbjct: 239 YLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAE 298
Query: 299 IKKLLS 304
IKK ++
Sbjct: 299 IKKSMA 304
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 103/175 (58%), Gaps = 31/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PHMYVVKDLVPDM FY QY+S++ +L T A + R F+
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYLQ------RTTAAPDGREFRQSKEDRKKLDGLYE 218
Query: 106 --LSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ E YRW D DEK E + LNN +
Sbjct: 219 CILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEK--KAERQDALNNSM 271
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 141 GVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 194
>gi|295841393|dbj|BAJ07110.1| succinate dehydrogenase subunit B [Corynespora cassiicola]
Length = 307
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 153/237 (64%), Gaps = 49/237 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
+K AK KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 69 DKDAKTKTFHIYRWNPDEPTSKPKMQTYTLDLNKTGPMMLDALIRIKNELDPTLTFRRSC 128
Query: 156 ----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
K S+IYPLPHMY+VKDLVPDM FY QY+S+
Sbjct: 129 REGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYIVKDLVPDMTLFYKQYRSV 188
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+P+LQRD +Y QS ++RKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q
Sbjct: 189 KPYLQRDTPAPDGREYRQSKEERKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQ 248
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRWI DSRDEKTA R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 SYRWIADSRDEKTAQRQDALNNSMSMYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 305
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 106 MMLDALIRIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 165
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPDM FY QY+S++ +L
Sbjct: 166 PHMYIVKDLVPDMTLFYKQYRSVKPYL 192
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPHMY+VKDLVPDM FY QY+S++P+L R
Sbjct: 142 GVNTLACLCRIPTDTTKESRIYPLPHMYIVKDLVPDMTLFYKQYRSVKPYLQR 194
>gi|407921654|gb|EKG14795.1| Ferredoxin [Macrophomina phaseolina MS6]
Length = 287
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/265 (50%), Positives = 164/265 (61%), Gaps = 53/265 (20%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKP---AKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
+ T+ + + SF + + +S V KP AK KTF IYRWNPD+P KP MQ Y +DL
Sbjct: 22 VSSTVFKRGMASF-VPESQTSTVAEPKPDKDAKVKTFHIYRWNPDEPSSKPKMQTYTLDL 80
Query: 149 N--------------NKIDAN-----------------------------------DKVS 159
N N++D K S
Sbjct: 81 NKTGPMMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKES 140
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+IYPLPH YVVKDLVPD+ FY QY+SI+P+LQRD + QS +DRKKLDGLYEC
Sbjct: 141 RIYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQRDTPPPDGRENRQSKEDRKKLDGLYEC 200
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN E+YLGPA+LMQ+YRWI DSRD+K A+R +QL + S+YRCHTI
Sbjct: 201 ILCACCSTSCPSYWWNSEEYLGPAILMQSYRWIADSRDQKKAERQDQLNNSMSLYRCHTI 260
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 261 LNCSRTCPKGLNPALAIAEIKKSMA 285
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 86 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 145
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QY+SI+ +L
Sbjct: 146 PHTYVVKDLVPDLTQFYKQYRSIKPYL 172
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ FY QY+SI+P+L R
Sbjct: 122 GVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQR 174
>gi|156841213|ref|XP_001643981.1| hypothetical protein Kpol_1070p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156114613|gb|EDO16123.1| hypothetical protein Kpol_1070p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 258
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 150/233 (64%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
K KTF IYRWNPD P KP +Q Y+VDL+N
Sbjct: 23 KLKTFQIYRWNPDTPSVKPRLQTYQVDLDNCGPMVLDALLKIKDEQDPTLTFRRSCREGI 82
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID N K KIYPLPHMYVVKDLVPD+ NFY QYKSI+P+L
Sbjct: 83 CGSCAMNIGGINTLACICKIDTNTSKKQKIYPLPHMYVVKDLVPDLTNFYQQYKSIKPYL 142
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + + LQS +DR KLDGLYECILCACCSTSCPSYWWN E+YLGP+VLMQAYRW
Sbjct: 143 QRKEFPKDGKEILQSQEDRAKLDGLYECILCACCSTSCPSYWWNQEEYLGPSVLMQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
++DSRDE A R L + S+YRCHTIMNCT+TCPKGLNPG AIAEIKK+L+
Sbjct: 203 LLDSRDEAGASRKEMLDNSMSLYRCHTIMNCTKTCPKGLNPGVAIAEIKKMLA 255
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIK+E DPTLTFRRSCREGICGSCAMNIGG+NTLACI KID N K KIYPL
Sbjct: 56 MVLDALLKIKDEQDPTLTFRRSCREGICGSCAMNIGGINTLACICKIDTNTSKKQKIYPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKSI+ +L
Sbjct: 116 PHMYVVKDLVPDLTNFYQQYKSIKPYL 142
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 73/139 (52%), Gaps = 31/139 (22%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLKD---PFSVYRCHTIMNCTRTC 286
Y WN + P+V +Q Y+ +D+ D L ++KD P +R R+C
Sbjct: 30 YRWNPDT---PSVKPRLQTYQVDLDNCGPMVLDALLKIKDEQDPTLTFR--------RSC 78
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLV 344
+G+ G + G++T A + KID N K KIYPLPHMYVVKDLV
Sbjct: 79 REGI-------------CGSCAMNIGGINTLACICKIDTNTSKKQKIYPLPHMYVVKDLV 125
Query: 345 PDMNNFYAQYKSIQPWLPR 363
PD+ NFY QYKSI+P+L R
Sbjct: 126 PDLTNFYQQYKSIKPYLQR 144
>gi|89573833|gb|ABD77142.1| succinate dehydrogenase complex subunit B [Tupaia glis]
Length = 200
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/151 (78%), Positives = 140/151 (92%), Gaps = 2/151 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 50 RIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIE 109
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 110 EREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 169
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEI
Sbjct: 170 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEI 200
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 110/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 5 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 64
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 65 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKQQYLQSIEEREKLDGLYECILCA 124
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 125 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 163
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 42 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 93
>gi|302497787|ref|XP_003010893.1| hypothetical protein ARB_02933 [Arthroderma benhamiae CBS 112371]
gi|302653034|ref|XP_003018353.1| hypothetical protein TRV_07643 [Trichophyton verrucosum HKI 0517]
gi|291174438|gb|EFE30253.1| hypothetical protein ARB_02933 [Arthroderma benhamiae CBS 112371]
gi|291181986|gb|EFE37708.1| hypothetical protein TRV_07643 [Trichophyton verrucosum HKI 0517]
Length = 289
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 171/286 (59%), Gaps = 58/286 (20%)
Query: 77 AQYKSIQRHLGGPWKILG-TLTAKNIRSFQLSA--AASSAVPAEKPA-KYKTFAIYRWNP 132
A +S R L G ++ + +++ + + SA +S+ P PA K KTF IYRWNP
Sbjct: 2 ASLRSTSRLLRGSSALMRPVMASRSYATVEASAKPTEASSAPTSAPAPKMKTFKIYRWNP 61
Query: 133 DKPDEKPTMQEYKVDLNNK----IDA---------------------------------- 154
D+P KP MQ Y +DLN +DA
Sbjct: 62 DEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVN 121
Query: 155 -----------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIG---- 199
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+LQRD +
Sbjct: 122 TLACLCRTPTDTTKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTPSPDLSFK 181
Query: 200 -NAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDE 258
+ QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDE
Sbjct: 182 KGRENRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDE 241
Query: 259 KTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+T R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIKK++S
Sbjct: 242 RTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMS 287
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ + + K ++IYPL
Sbjct: 83 MVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 143 PHTYVVKDLVPDMTQFYKQYKSIKPYL 169
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 135 KETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 171
>gi|390596216|gb|EIN05619.1| iron-sulphar subunit protein of succinate dehydrogenase
[Punctularia strigosozonata HHB-11173 SS5]
Length = 272
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/253 (52%), Positives = 158/253 (62%), Gaps = 50/253 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
R+F SA AVP EKP K F IYRW+P++P +KPT+Q Y+VDLN
Sbjct: 20 RAFASSATRRQAVPTEKPVLKKQFKIYRWDPEEPAKKPTLQTYEVDLNQCGPMILDALIK 79
Query: 151 -------------------------------------KIDANDKV-SKIYPLPHMYVVKD 172
+ID N+K +KIYPLPHMY+VKD
Sbjct: 80 IKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNEKKDTKIYPLPHMYIVKD 139
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD++ FY QYKSIQP+LQ D +YLQS +DR+KLDGLYECILCACCSTSCPSY
Sbjct: 140 LVPDLSLFYKQYKSIQPYLQNDNPP-EKGEYLQSQEDRRKLDGLYECILCACCSTSCPSY 198
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPA LMQAYRWI DSRD T RL + ++ S+YRCHTI NC RTCPKGLNP
Sbjct: 199 WWNQDEYLGPAALMQAYRWIADSRDSYTKQRLEKFQNELSLYRCHTIFNCARTCPKGLNP 258
Query: 293 GRAIAEIKKLLSG 305
AIA+IK L+
Sbjct: 259 AAAIAKIKLELAA 271
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKV-SKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N+K +KIYPL
Sbjct: 72 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNEKKDTKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD++ FY QYKSIQ +L
Sbjct: 132 PHMYIVKDLVPDLSLFYKQYKSIQPYL 158
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Query: 317 AALHKIDANDKV-SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID N+K +KIYPLPHMY+VKDLVPD++ FY QYKSIQP+L
Sbjct: 113 ACLCRIDRNEKKDTKIYPLPHMYIVKDLVPDLSLFYKQYKSIQPYL 158
>gi|354546086|emb|CCE42815.1| hypothetical protein CPAR2_204580 [Candida parapsilosis]
Length = 257
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 158/250 (63%), Gaps = 49/250 (19%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
+ S + V EK + K F IYRWNPD P+ +P M+EY+VDLN
Sbjct: 6 LRRSVRGLATVAEEKTPRLKKFQIYRWNPDTPEVQPKMKEYEVDLNKCGPMVLDALLKIK 65
Query: 150 NKIDAN-----------------------------------DKVSKIYPLPHMYVVKDLV 174
N+ DA K +KIYPLPHM+VV+DLV
Sbjct: 66 NEEDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDTKIYPLPHMFVVRDLV 125
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ +FY QYKSI+P+LQR+ + + LQS+ DR KLDGLYECILCACCSTSCPSYWW
Sbjct: 126 PDLTHFYKQYKSIEPYLQREDQPADGRENLQSIADRAKLDGLYECILCACCSTSCPSYWW 185
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N ++YLGPAVLMQAYRW+IDSRD+ A R L++ S+YRCHTIMNC RTCPKGLNPGR
Sbjct: 186 NQQQYLGPAVLMQAYRWLIDSRDQAGAKRKAMLQNSMSLYRCHTIMNCARTCPKGLNPGR 245
Query: 295 AIAEIKKLLS 304
AIAEIKK ++
Sbjct: 246 AIAEIKKQMA 255
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ +ID + K +KIYPL
Sbjct: 56 MVLDALLKIKNEEDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDTDTSKDTKIYPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 116 PHMFVVRDLVPDLTHFYKQYKSIEPYL 142
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L +ID + K +KIYPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 97 ACLCRIDTDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQRE 145
>gi|296810608|ref|XP_002845642.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma otae CBS
113480]
gi|238843030|gb|EEQ32692.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma otae CBS
113480]
Length = 284
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 151/233 (64%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA-------ND------------- 156
K KTF IYRWNPD+P KP MQ Y +DLN +DA ND
Sbjct: 50 KMKTFKIYRWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNENDPTLTFRRSCREGI 109
Query: 157 -------------------------KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K ++IYPLPH YVVKDLVPDM FY QYKSIQP+L
Sbjct: 110 CGSCAMNIDGVNTLACLCRTPTDTSKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIQPYL 169
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QRD + + QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW
Sbjct: 170 QRDTPSPDGRENRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRW 229
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+IDSRDE+T R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIKK++S
Sbjct: 230 LIDSRDERTEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMS 282
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ + + K ++IYPL
Sbjct: 83 MVLDALIRIKNENDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTSKETRIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSIQ +L
Sbjct: 143 PHTYVVKDLVPDMTQFYKQYKSIQPYL 169
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 325 NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K ++IYPLPH YVVKDLVPDM FY QYKSIQP+L R
Sbjct: 133 TSKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIQPYLQR 171
>gi|281346729|gb|EFB22313.1| hypothetical protein PANDA_013300 [Ailuropoda melanoleuca]
Length = 236
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 159/241 (65%), Gaps = 58/241 (24%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
R Q +AA + + K FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 4 RGVQTAAATAPRI--------KKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIK 55
Query: 150 ------------------------------------NKIDAN-DKVSKIYPLPHMYVVKD 172
+ID N +KVSKIYPLPHMYV+KD
Sbjct: 56 IKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKD 115
Query: 173 LVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
LVPD++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPS
Sbjct: 116 LVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPS 175
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHTIMNCTRTCPK
Sbjct: 176 YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKVCG 235
Query: 292 P 292
P
Sbjct: 236 P 236
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 48 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 107
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 108 PHMYVIKDLVPDLSNFYAQYKSIEPYL 134
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 85 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 136
>gi|229541067|sp|A8WPF0.2|DHSB_CAEBR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
Length = 282
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 161/255 (63%), Gaps = 52/255 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------ 150
P + + KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 30 PKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRR 89
Query: 151 ------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY
Sbjct: 90 SCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYA 149
Query: 186 SIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
SIQPW+Q+ +G Q QS+ +R +LDGLYECILCACCSTSCPSYWWN +KYLGPAV
Sbjct: 150 SIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAV 209
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
LMQAYRW+IDSRD+ +RL+++ D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+
Sbjct: 210 LMQAYRWVIDSRDDYAQERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLT 269
Query: 305 GLVKKDKPGLDTAAL 319
G K KP + +A
Sbjct: 270 GF--KSKPAAEPSAF 282
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KIDA+ K +KIYPL
Sbjct: 69 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 129 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 154
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 110 ACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 157
>gi|315051400|ref|XP_003175074.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma gypseum
CBS 118893]
gi|311340389|gb|EFQ99591.1| succinate dehydrogenase iron-sulfur subunit [Arthroderma gypseum
CBS 118893]
Length = 284
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 169/285 (59%), Gaps = 61/285 (21%)
Query: 77 AQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPA--------KYKTFAIY 128
A +S R G ++ + A RS+ + +SA P E P+ K KTF IY
Sbjct: 2 ASLRSTSRLFRGSSALMRPVMAS--RSY--ATVETSAKPTEAPSAATSAPAPKMKTFKIY 57
Query: 129 RWNPDKPDEKPTMQEYKVDLNNK----IDA------------------------------ 154
RWNPD+P KP MQ Y +DLN +DA
Sbjct: 58 RWNPDEPTAKPRMQTYTIDLNKTGPMVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNI 117
Query: 155 ---------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIG 199
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+LQRD +
Sbjct: 118 DGVNTLACLCRTPTDTTKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTPSPD 177
Query: 200 NAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEK 259
+ QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+IDSRDE+
Sbjct: 178 GRENRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDER 237
Query: 260 TADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
T R L + SVYRCHTI+NC+RTCPKGLNPG+AIAEIKK++S
Sbjct: 238 TEQRKAALDNSMSVYRCHTILNCSRTCPKGLNPGKAIAEIKKMMS 282
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ + + K ++IYPL
Sbjct: 83 MVLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRTPTDTTKETRIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 143 PHTYVVKDLVPDMTQFYKQYKSIKPYL 169
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 135 KETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 171
>gi|190346991|gb|EDK39191.2| hypothetical protein PGUG_03289 [Meyerozyma guilliermondii ATCC
6260]
Length = 257
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 156/241 (64%), Gaps = 50/241 (20%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------------- 150
A A++PA K F IYRWNPD P+ +P M+ Y+VDLN
Sbjct: 16 ATSAQQPA-LKKFQIYRWNPDTPEVEPQMKTYEVDLNQCGPMVLDAILKIKNEQDSTLTF 74
Query: 151 --------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQ 183
KID + K +KIYPLPHM+VV+DLVPD+ +FY Q
Sbjct: 75 RRSCREGICGSCAMNIGGINTLACLCKIDKDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQ 134
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
YKSIQP+LQR+ + LQS++DR KLDGLYECILCACCSTSCPSYWWN ++YLGPA
Sbjct: 135 YKSIQPYLQRETLPSDGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQEYLGPA 194
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRW+IDSRDE T R L++ S+YRCHTIMNC RTCPKGLNPGRAIAEIKK L
Sbjct: 195 VLMQAYRWLIDSRDEATKARKQMLQNSMSLYRCHTIMNCARTCPKGLNPGRAIAEIKKQL 254
Query: 304 S 304
+
Sbjct: 255 A 255
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 100/156 (64%), Gaps = 21/156 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDA++KIKNE D TLTFRRSCREGICGSCAMNIGG+NTLAC+ KID + K +KIYPL
Sbjct: 56 MVLDAILKIKNEQDSTLTFRRSCREGICGSCAMNIGGINTLACLCKIDKDTSKDTKIYPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LS 107
PHM+VV+DLVPD+ +FY QYKSIQ +L + L + +N++S + L
Sbjct: 116 PHMFVVRDLVPDLTHFYKQYKSIQPYLQR--ETLPSDGRENLQSIEDRAKLDGLYECILC 173
Query: 108 AAASSAVPA------EKPAKYKTFAIYRWNPDKPDE 137
A S++ P+ E YRW D DE
Sbjct: 174 ACCSTSCPSYWWNQQEYLGPAVLMQAYRWLIDSRDE 209
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L KID + K +KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 92 GINTLACLCKIDKDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQRE 145
>gi|169600994|ref|XP_001793919.1| hypothetical protein SNOG_03351 [Phaeosphaeria nodorum SN15]
gi|111067436|gb|EAT88556.1| hypothetical protein SNOG_03351 [Phaeosphaeria nodorum SN15]
Length = 306
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 153/237 (64%), Gaps = 49/237 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
EK AK KTF IYRWNPD+P KP MQ Y++DLN N++D
Sbjct: 68 EKGAKVKTFHIYRWNPDEPTSKPKMQSYELDLNKTGPMMLDALIRIKNEVDPTLTFRRSC 127
Query: 156 ----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
K ++IYPLPHMYVVKDLVPDM FY QY+S+
Sbjct: 128 REGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHMYVVKDLVPDMTLFYKQYRSV 187
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+P+LQR +Y Q+ +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q
Sbjct: 188 KPYLQRTTPAPDGREYRQTKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQ 247
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRWI DSRDEK A+R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 248 SYRWIADSRDEKLAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 102/169 (60%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI----QRHLGGPWKILGTLTAKNIRSFQ------LSAA 109
PHMYVVKDLVPDM FY QY+S+ QR P T ++ + L A
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYLQRTTPAPDGREYRQTKEDRKKLDGLYECILCAC 224
Query: 110 ASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ E YRW D DEK + E + LNN +
Sbjct: 225 CSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEK--LAERQDALNNSM 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 26/124 (20%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 92 MQSYELDLNKTGPMMLDALIRIKNEVDPTLTFR--------RSCREGI------------ 131
Query: 303 LSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G++T A L +I + K ++IYPLPHMYVVKDLVPDM FY QY+S++P+
Sbjct: 132 -CGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPY 190
Query: 361 LPRS 364
L R+
Sbjct: 191 LQRT 194
>gi|308458708|ref|XP_003091688.1| CRE-SDHB-1 protein [Caenorhabditis remanei]
gi|308255374|gb|EFO99326.1| CRE-SDHB-1 protein [Caenorhabditis remanei]
Length = 288
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 157/242 (64%), Gaps = 50/242 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 37 RIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGI 96
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+
Sbjct: 97 CGSCAMNIGGQNTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWI 156
Query: 192 QRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
Q+ +G Q QS+ +R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 157 QKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 216
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
W+IDSRD+ +RL+++ D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+G+ K
Sbjct: 217 WVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTGMKTKP 276
Query: 311 KP 312
+P
Sbjct: 277 EP 278
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KIDA+ K +KIYPL
Sbjct: 70 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDADTSKSTKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 130 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 155
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 111 ACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 158
>gi|345568100|gb|EGX51001.1| hypothetical protein AOL_s00054g737 [Arthrobotrys oligospora ATCC
24927]
Length = 281
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 162/269 (60%), Gaps = 58/269 (21%)
Query: 93 LGTLTAKNIRSFQ---------LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQE 143
L L + NIR F L+ A + +K K F+IYRW+PD+P +KP MQE
Sbjct: 9 LRLLASSNIRRFSPTIINSTRCLATLAKEEIVTKKEPLVKKFSIYRWSPDEPTKKPQMQE 68
Query: 144 YKVDLN--------------NKIDAN---------------------------------- 155
Y +DLN N++D
Sbjct: 69 YSLDLNECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIEGTNTLACLSRINRD 128
Query: 156 -DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLD 214
++IYPLPHMYVVKDLVPD+ NFY QYKSIQP+LQ + ++LQ+ +DRKKLD
Sbjct: 129 ASSTTRIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYLQSKEPAPEGKEFLQTKEDRKKLD 188
Query: 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
GLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW+ DSRD K+ R + L++ S+Y
Sbjct: 189 GLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRWLADSRDGKSGQRKDMLENSMSLY 248
Query: 275 RCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RCHTIMNC RTCPKGLNPG AIA+IK ++
Sbjct: 249 RCHTIMNCARTCPKGLNPGLAIAKIKMMM 277
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S+I+ + ++IYPL
Sbjct: 79 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIEGTNTLACLSRINRDASSTTRIYPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ NFY QYKSIQ +L
Sbjct: 139 PHMYVVKDLVPDLTNFYKQYKSIQPYL 165
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +I+ + ++IYPLPHMYVVKDLVPD+ NFY QYKSIQP+L
Sbjct: 120 ACLSRINRDASSTTRIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYL 165
>gi|170090053|ref|XP_001876249.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649509|gb|EDR13751.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 263
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 159/260 (61%), Gaps = 50/260 (19%)
Query: 95 TLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----- 149
L+ + R+F SA AVP +KP K F IYRWNPD+P KPT+Q YK+DLN
Sbjct: 4 ALSRQARRAFSSSARRFQAVPTQKPVLEKEFKIYRWNPDEPATKPTLQSYKIDLNQTGPM 63
Query: 150 ---------NKIDAN-----------------------------------DKVSKIYPLP 165
N++D K +KIYPLP
Sbjct: 64 ILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREPAKDTKIYPLP 123
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
HMY+VKDLVPD+ FY QYKSI+PWLQ D ++LQS ++RKKLDG+YECILCACC
Sbjct: 124 HMYIVKDLVPDLTLFYKQYKSIEPWLQNDNPP-AEGEFLQSPEERKKLDGMYECILCACC 182
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWN ++YLGPA LMQAYRWI DSRD A+R +L++ S+YRCHTI NC+RT
Sbjct: 183 STSCPSYWWNQDEYLGPATLMQAYRWIADSRDANGAERKERLQNEMSLYRCHTIFNCSRT 242
Query: 286 CPKGLNPGRAIAEIKKLLSG 305
CPKGLNP AIA IK L+
Sbjct: 243 CPKGLNPAAAIAHIKMELAA 262
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID K +KIYPL
Sbjct: 63 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREPAKDTKIYPL 122
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+ FY QYKSI+ PW
Sbjct: 123 PHMYIVKDLVPDLTLFYKQYKSIE-----PW 148
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 31/137 (22%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN ++ PA +Q+Y+ ++ D L ++K DP +R R+C
Sbjct: 37 YRWNPDE---PATKPTLQSYKIDLNQTGPMILDALIKIKNEVDPTLTFR--------RSC 85
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLV 344
+G+ G + G +T A L +ID K +KIYPLPHMY+VKDLV
Sbjct: 86 REGI-------------CGSCAMNIDGQNTLACLCRIDREPAKDTKIYPLPHMYIVKDLV 132
Query: 345 PDMNNFYAQYKSIQPWL 361
PD+ FY QYKSI+PWL
Sbjct: 133 PDLTLFYKQYKSIEPWL 149
>gi|225558114|gb|EEH06399.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces capsulatus
G186AR]
Length = 283
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/257 (52%), Positives = 157/257 (61%), Gaps = 54/257 (21%)
Query: 102 RSFQLSAAASSAVPAEKPA-----KYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----I 152
RS+ AS P+ + KTF IYRWNPDKP EKP M +Y +DLN +
Sbjct: 25 RSYATVEPASKVADQSTPSTSQSPRLKTFKIYRWNPDKPTEKPYMHDYTLDLNKTGPMVL 84
Query: 153 DA---------------------------------------------NDKVSKIYPLPHM 167
DA K S+IYPLPH
Sbjct: 85 DALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPLPHT 144
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
YVVKDLVPD+ FY QYKSI+P+LQRD + + QS DRKKLDGLYECILCACCST
Sbjct: 145 YVVKDLVPDLTYFYKQYKSIKPYLQRDTPSPDGREIRQSPADRKKLDGLYECILCACCST 204
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN E+YLGPA+L+Q+YRW+IDSRDEKT +R L + SVYRCHTI+NCTRTCP
Sbjct: 205 SCPSYWWNSEEYLGPALLLQSYRWLIDSRDEKTEERKAHLDNSMSVYRCHTILNCTRTCP 264
Query: 288 KGLNPGRAIAEIKKLLS 304
KGLNPG AIAEIKK+++
Sbjct: 265 KGLNPGLAIAEIKKMMA 281
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 100/172 (58%), Gaps = 25/172 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K S+IYPL
Sbjct: 82 MVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETTKESRIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------L 106
PH YVVKDLVPD+ FY QYKSI+ +L + + + IR L
Sbjct: 142 PHTYVVKDLVPDLTYFYKQYKSIKPYLQ---RDTPSPDGREIRQSPADRKKLDGLYECIL 198
Query: 107 SAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A S++ P+ E YRW D DEK +E K L+N +
Sbjct: 199 CACCSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEK--TEERKAHLDNSM 248
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 118 GVNTLACLCRIPTETTKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 170
>gi|326429657|gb|EGD75227.1| succinate dehydrogenase [Salpingoeca sp. ATCC 50818]
Length = 262
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 152/227 (66%), Gaps = 48/227 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F+IYRW+P+KP +KP Q Y++DLN+
Sbjct: 32 KKFSIYRWDPEKPGDKPHQQTYEIDLNDCGPMVLDALIKIKNEVDPTLTFRRSCREGICG 91
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ KI PLPHMYVVKDLVPDM NFY QYK+I+PWLQ
Sbjct: 92 SCSMNIDGTNNLACLCPITRDGSEMKIRPLPHMYVVKDLVPDMTNFYQQYKAIEPWLQTS 151
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K+ ++LQS+ DRKKLDG+YECILCACCSTSCPSYWWNG+KYLGPA LMQA RW+ D
Sbjct: 152 KQPEDGKEFLQSIADRKKLDGMYECILCACCSTSCPSYWWNGDKYLGPAALMQARRWMAD 211
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
SRDE+ +R+++L+DPFS+YRCHTIMNCT+ CPK LNPG+AIAEIK+
Sbjct: 212 SRDERKTERMDRLRDPFSMYRCHTIMNCTKACPKHLNPGKAIAEIKR 258
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNI G N LAC+ I + KI PLP
Sbjct: 63 MVLDALIKIKNEVDPTLTFRRSCREGICGSCSMNIDGTNNLACLCPITRDGSEMKIRPLP 122
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYVVKDLVPDM NFY QYK+I+ PW
Sbjct: 123 HMYVVKDLVPDMTNFYQQYKAIE-----PW 147
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 34/48 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L I + KI PLPHMYVVKDLVPDM NFY QYK+I+PWL S
Sbjct: 104 ACLCPITRDGSEMKIRPLPHMYVVKDLVPDMTNFYQQYKAIEPWLQTS 151
>gi|440636663|gb|ELR06582.1| succinate dehydrogenase iron-sulfur subunit, mitochondrial
[Geomyces destructans 20631-21]
Length = 284
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 152/239 (63%), Gaps = 49/239 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKV------------ 158
PA + KTF IYRWNPD+P KP MQ Y +DLN +DA ++
Sbjct: 45 PAPAAPRTKTFHIYRWNPDEPSTKPKMQAYTLDLNKTGPMMLDALIRIKNEDDPTLTFRR 104
Query: 159 ---------------------------------SKIYPLPHMYVVKDLVPDMNNFYAQYK 185
SKIYPLPH YVVKD+VPD+ +FY QYK
Sbjct: 105 SCREGICGSCAMNIDGVNTLACLCRIPTDTTQESKIYPLPHTYVVKDIVPDLTHFYKQYK 164
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+P+LQR +YLQS++DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL
Sbjct: 165 SIKPYLQRTTPAEHGKEYLQSVEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVL 224
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+Q+YRW+ DSRDEK +R L + SVYRCHTIMNC+RTCPKGLNPG AIAEIKK L+
Sbjct: 225 LQSYRWLADSRDEKKMERKAALDNSMSVYRCHTIMNCSRTCPKGLNPGLAIAEIKKELA 283
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + + SKIYPL
Sbjct: 84 MMLDALIRIKNEDDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTQESKIYPL 143
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ +FY QYKSI+ +L
Sbjct: 144 PHTYVVKDIVPDLTHFYKQYKSIKPYL 170
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 26/124 (20%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQAY ++ D L ++K DP +R R+C +G+
Sbjct: 71 MQAYTLDLNKTGPMMLDALIRIKNEDDPTLTFR--------RSCREGI------------ 110
Query: 303 LSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G++T A L +I + + SKIYPLPH YVVKD+VPD+ +FY QYKSI+P+
Sbjct: 111 -CGSCAMNIDGVNTLACLCRIPTDTTQESKIYPLPHTYVVKDIVPDLTHFYKQYKSIKPY 169
Query: 361 LPRS 364
L R+
Sbjct: 170 LQRT 173
>gi|409077425|gb|EKM77791.1| SDH2 iron-sulfur protein subunit of succinate dehydrogenase
[Agaricus bisporus var. burnettii JB137-S8]
gi|426193296|gb|EKV43230.1| succinate dehydrogenase iron-sulfur subunit [Agaricus bisporus var.
bisporus H97]
Length = 267
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/252 (53%), Positives = 159/252 (63%), Gaps = 53/252 (21%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
RSF +A A+ AV +KP K F IYRWNPD+P +KPT+Q YK+DLN
Sbjct: 18 RSFATTARAAQAV--QKPVLEKEFKIYRWNPDEPSKKPTLQSYKIDLNQCGPMILDALIK 75
Query: 150 --NKID-----------------------------------ANDKVSKIYPLPHMYVVKD 172
N++D K +K+YPLPHMYVVKD
Sbjct: 76 IKNEMDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREGSKDTKVYPLPHMYVVKD 135
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ FY QYKSIQPWLQ D N ++LQS++DRKKLDGLYECILCACCSTSCPSY
Sbjct: 136 LVPDLTLFYKQYKSIQPWLQND--NPPAHEHLQSIEDRKKLDGLYECILCACCSTSCPSY 193
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPA LMQAYRWI DSRD A R L++ S+YRCHTI NC+RTCPKGLNP
Sbjct: 194 WWNQDEYLGPATLMQAYRWIADSRDTHGAQRKEVLQNEMSLYRCHTIFNCSRTCPKGLNP 253
Query: 293 GRAIAEIKKLLS 304
AIA+IK L+
Sbjct: 254 AAAIAKIKLELA 265
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID K +K+YPL
Sbjct: 68 MILDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREGSKDTKVYPL 127
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPD+ FY QYKSIQ PW
Sbjct: 128 PHMYVVKDLVPDLTLFYKQYKSIQ-----PW 153
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID K +K+YPLPHMYVVKDLVPD+ FY QYKSIQPWL
Sbjct: 109 ACLCRIDREGSKDTKVYPLPHMYVVKDLVPDLTLFYKQYKSIQPWL 154
>gi|261199688|ref|XP_002626245.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces
dermatitidis SLH14081]
gi|239594453|gb|EEQ77034.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces
dermatitidis SLH14081]
gi|239615616|gb|EEQ92603.1| succinate dehydrogenase iron-sulfur protein [Ajellomyces
dermatitidis ER-3]
gi|327354240|gb|EGE83097.1| succinate dehydrogenase iron-sulfur subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 282
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 157/245 (64%), Gaps = 50/245 (20%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA---------- 154
A + +E P + KTF +YRWNPDKP EKP MQ+Y +DLN +DA
Sbjct: 37 ADQTPATSESP-RLKTFKVYRWNPDKPTEKPYMQDYTLDLNKTGPMVLDALIRIKNEQDP 95
Query: 155 -----------------------------------NDKVSKIYPLPHMYVVKDLVPDMNN 179
K S+IYPLPH YVVKDLVPD+
Sbjct: 96 TLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETAKESRIYPLPHTYVVKDLVPDLTY 155
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FY QYKSI+P+LQRD + ++ QS DRKKLDGLYECILCACCSTSCPSYWWN E+Y
Sbjct: 156 FYKQYKSIKPYLQRDTPSPDGREHRQSPADRKKLDGLYECILCACCSTSCPSYWWNSEEY 215
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPA+L+Q+YRW+IDSRDEKT +R L + SVYRCHTI+NC+RTCPKGLNPG AIAEI
Sbjct: 216 LGPALLLQSYRWLIDSRDEKTEERKADLDNSMSVYRCHTILNCSRTCPKGLNPGLAIAEI 275
Query: 300 KKLLS 304
KK+++
Sbjct: 276 KKMMA 280
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 99/169 (58%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K S+IYPL
Sbjct: 81 MVLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETAKESRIYPL 140
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI----QRHLGGPWKILGTLTAKNIRSFQ------LSAA 109
PH YVVKDLVPD+ FY QYKSI QR P + + + L A
Sbjct: 141 PHTYVVKDLVPDLTYFYKQYKSIKPYLQRDTPSPDGREHRQSPADRKKLDGLYECILCAC 200
Query: 110 ASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ E YRW D DEK +E K DL+N +
Sbjct: 201 CSTSCPSYWWNSEEYLGPALLLQSYRWLIDSRDEK--TEERKADLDNSM 247
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I K S+IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 117 GVNTLACLCRIPTETAKESRIYPLPHTYVVKDLVPDLTYFYKQYKSIKPYLQR 169
>gi|389742588|gb|EIM83774.1| succinate dehydrogenase and fumarate r [Stereum hirsutum FP-91666
SS1]
Length = 271
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 156/252 (61%), Gaps = 49/252 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
R+F S+A AVP EKPA K F IYRWNPD+P +KP +Q Y ++LN
Sbjct: 20 RTFATSSARRQAVPTEKPALNKQFKIYRWNPDEPAKKPELQTYNINLNECGPMVLDALIK 79
Query: 151 -------------------------------------KIDANDKVSKIYPLPHMYVVKDL 173
+ID + K SKIYPLPHMYVVKDL
Sbjct: 80 IKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRSPKDSKIYPLPHMYVVKDL 139
Query: 174 VPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
VPD+ FY QYKSI+P+LQ D ++LQS +DR+KLDG+YECILCACCSTSCPSYW
Sbjct: 140 VPDLTLFYKQYKSIEPYLQNDNPP-AEGEFLQSQEDRRKLDGMYECILCACCSTSCPSYW 198
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN ++YLGPA LMQAYRWI DSRD A R +L++ S+YRCHTI NC RTCPKGLNP
Sbjct: 199 WNQDEYLGPATLMQAYRWIADSRDSYGAQRKEKLQNELSLYRCHTIFNCARTCPKGLNPA 258
Query: 294 RAIAEIKKLLSG 305
AIA+IK L+
Sbjct: 259 AAIAKIKLELAA 270
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 76/86 (88%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID + K SKIYPLP
Sbjct: 72 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRSPKDSKIYPLP 131
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMYVVKDLVPD+ FY QYKSI+ +L
Sbjct: 132 HMYVVKDLVPDLTLFYKQYKSIEPYL 157
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID + K SKIYPLPHMYVVKDLVPD+ FY QYKSI+P+L
Sbjct: 113 ACLCRIDRSPKDSKIYPLPHMYVVKDLVPDLTLFYKQYKSIEPYL 157
>gi|409043845|gb|EKM53327.1| hypothetical protein PHACADRAFT_259610 [Phanerochaete carnosa
HHB-10118-sp]
Length = 274
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 159/254 (62%), Gaps = 50/254 (19%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+R+F SAA A PAEKP K F IYRWNPD+P EKPT+Q Y +DLN
Sbjct: 21 VRTFASSAARFQATPAEKPVLQKEFKIYRWNPDQPAEKPTLQSYTIDLNQCGPMILDALI 80
Query: 150 ---NKIDA-----------------------------------NDKVSKIYPLPHMYVVK 171
N+ID + K SKIYPLPHMY+VK
Sbjct: 81 KIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIERDSGKDSKIYPLPHMYIVK 140
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ FY QYKSI+P+L+ D G ++LQS +DR+KLDG+YECILCACCSTSCPS
Sbjct: 141 DLVPDLTLFYKQYKSIEPYLKNDNPPQGR-EFLQSQEDRRKLDGMYECILCACCSTSCPS 199
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN + YLGPA LM AYRWI DSRD A+R +L++ S+YRCHTI NC RTCPKGLN
Sbjct: 200 YWWNQDVYLGPATLMAAYRWIADSRDTYKAERKEKLQNEMSLYRCHTIFNCARTCPKGLN 259
Query: 292 PGRAIAEIKKLLSG 305
P +AIA++K L+
Sbjct: 260 PAQAIAKLKLELAA 273
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I+ + K SKIYPL
Sbjct: 74 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIERDSGKDSKIYPL 133
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSI+ +L
Sbjct: 134 PHMYIVKDLVPDLTLFYKQYKSIEPYL 160
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +I+ + K SKIYPLPHMY+VKDLVPD+ FY QYKSI+P+L
Sbjct: 115 ACLCRIERDSGKDSKIYPLPHMYIVKDLVPDLTLFYKQYKSIEPYL 160
>gi|393222465|gb|EJD07949.1| succinate dehydrogenase iron-sulfur subunit, mitochondrial
[Fomitiporia mediterranea MF3/22]
Length = 275
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/257 (51%), Positives = 158/257 (61%), Gaps = 50/257 (19%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------ 150
T+ +R+F SAA + A P +KP YK F IYRW+P+ P +KP +Q YK+DLN
Sbjct: 18 TSTVVRTFASSAARAQAEPVQKPEMYKEFKIYRWDPENPSKKPELQSYKIDLNQCGPMVL 77
Query: 151 ------------------------------------------KIDAN-DKVSKIYPLPHM 167
+ID N K SKIYPLPHM
Sbjct: 78 DALIKVKNEMDSTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDRNTSKNSKIYPLPHM 137
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
YVVKDLVPD+ FY QYKSI+PWL+ D +YLQS +DRKKLDG+YECILCACCST
Sbjct: 138 YVVKDLVPDLTQFYKQYKSIEPWLKNDNPP-EKGEYLQSPEDRKKLDGMYECILCACCST 196
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN ++YLGPA LMQAYRW+ DSRD R +L++ S+YRCHTI NC RTCP
Sbjct: 197 SCPSYWWNQDEYLGPATLMQAYRWMADSRDSYKQQRGEKLQNDLSMYRCHTIFNCARTCP 256
Query: 288 KGLNPGRAIAEIKKLLS 304
KGLNP AIA+IK L+
Sbjct: 257 KGLNPAMAIAKIKLELA 273
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIK+KNEMD TLTFRRSCREGICGSCAMNI GVNTLAC+ +ID N K SKIYPL
Sbjct: 75 MVLDALIKVKNEMDSTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDRNTSKNSKIYPL 134
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPD+ FY QYKSI+ PW
Sbjct: 135 PHMYVVKDLVPDLTQFYKQYKSIE-----PW 160
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID N K SKIYPLPHMYVVKDLVPD+ FY QYKSI+PWL
Sbjct: 111 GVNTLACLCRIDRNTSKNSKIYPLPHMYVVKDLVPDLTQFYKQYKSIEPWL 161
>gi|402077987|gb|EJT73336.1| hypothetical protein GGTG_10180 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 289
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/234 (53%), Positives = 150/234 (64%), Gaps = 49/234 (20%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
A+ K+F IYRW+P KP EKP MQ Y +DLN
Sbjct: 55 ARLKSFRIYRWDPSKPTEKPHMQTYSLDLNKTGPMVLDALVRIKNELDPTLTFRRSCREG 114
Query: 151 -------------------KIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
+I D KIYPLPH YVVKDLVPD+ +FY QY+SI+P+
Sbjct: 115 ICGSCAMNINGTNTLACLCRIPTEDSAEVKIYPLPHTYVVKDLVPDLTHFYKQYRSIKPY 174
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQRD + +Y QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YR
Sbjct: 175 LQRDTPSPDGKEYRQSKEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYR 234
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W+ DSRDE+TA R L + S+YRCHTI+NCTRTCPKGLNPGRAIAEIKK ++
Sbjct: 235 WLADSRDERTAQRRAALDNSMSLYRCHTILNCTRTCPKGLNPGRAIAEIKKEMA 288
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I D KIYPL
Sbjct: 89 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTEDSAEVKIYPL 148
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QY+SI+ +L
Sbjct: 149 PHTYVVKDLVPDLTHFYKQYRSIKPYL 175
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I D KIYPLPH YVVKDLVPD+ +FY QY+SI+P+L R
Sbjct: 130 ACLCRIPTEDSAEVKIYPLPHTYVVKDLVPDLTHFYKQYRSIKPYLQR 177
>gi|194769556|ref|XP_001966870.1| GF19050 [Drosophila ananassae]
gi|190618391|gb|EDV33915.1| GF19050 [Drosophila ananassae]
Length = 444
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/252 (52%), Positives = 156/252 (61%), Gaps = 54/252 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYRW KP ++P Q Y++DL
Sbjct: 193 RMKTFEIYRW---KPGDQPQTQTYELDLEKCGAMVLDALIKIKTDLDPTLTFRRSCREGI 249
Query: 151 ------------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
ID N+ + +IYPLPH+YV++DLVPD+ FY QY+SIQPWL
Sbjct: 250 CGSCAMNINGTNTLACLAPIDQNESRCCRIYPLPHLYVIRDLVPDLTQFYDQYRSIQPWL 309
Query: 192 QRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
QR K G AQYLQS++DR LDGLYECILCACC TSCPSYWWN +KYLGPAVLMQAY
Sbjct: 310 QRKNMKHEAGTAQYLQSVEDRAVLDGLYECILCACCQTSCPSYWWNSDKYLGPAVLMQAY 369
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
RW+IDSRDE T RL LKDP+ +YRCHTIMNCT TCPK LNP RAI +K+L G+ KK
Sbjct: 370 RWVIDSRDEATEQRLGFLKDPWKLYRCHTIMNCTNTCPKHLNPARAIIALKQLCVGMKKK 429
Query: 310 DKPGLDTAALHK 321
DKP + T AL +
Sbjct: 430 DKPQMKTDALFQ 441
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIK ++DPTLTFRRSCREGICGSCAMNI G NTLAC++ ID N+ + +IYPL
Sbjct: 223 MVLDALIKIKTDLDPTLTFRRSCREGICGSCAMNINGTNTLACLAPIDQNESRCCRIYPL 282
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YV++DLVPD+ FY QY+SIQ PW
Sbjct: 283 PHLYVIRDLVPDLTQFYDQYRSIQ-----PW 308
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L ID N+ + +IYPLPH+YV++DLVPD+ FY QY+SIQPWL R
Sbjct: 264 ACLAPIDQNESRCCRIYPLPHLYVIRDLVPDLTQFYDQYRSIQPWLQR 311
>gi|146415877|ref|XP_001483908.1| hypothetical protein PGUG_03289 [Meyerozyma guilliermondii ATCC
6260]
Length = 257
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 156/241 (64%), Gaps = 50/241 (20%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------------- 150
A A++PA K F IYRWNPD P+ +P M+ Y+VDLN
Sbjct: 16 ATLAQQPA-LKKFQIYRWNPDTPEVEPQMKTYEVDLNQCGPMVLDAILKIKNEQDSTLTF 74
Query: 151 --------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQ 183
KID + K +KIYPLPHM+VV+DLVPD+ +FY Q
Sbjct: 75 RRSCREGICGSCAMNIGGINTLACLCKIDKDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQ 134
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
YKSIQP+LQR+ + LQS++DR KLDGLYECILCACCSTSCPSYWWN ++YLGPA
Sbjct: 135 YKSIQPYLQRETLPSDGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQEYLGPA 194
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRW+IDSRDE T R L++ S+YRCHTIMNC RTCPKGLNPGRAIAEIKK L
Sbjct: 195 VLMQAYRWLIDSRDEATKARKQMLQNSMSLYRCHTIMNCARTCPKGLNPGRAIAEIKKQL 254
Query: 304 S 304
+
Sbjct: 255 A 255
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 100/156 (64%), Gaps = 21/156 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDA++KIKNE D TLTFRRSCREGICGSCAMNIGG+NTLAC+ KID + K +KIYPL
Sbjct: 56 MVLDAILKIKNEQDSTLTFRRSCREGICGSCAMNIGGINTLACLCKIDKDTSKDTKIYPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LS 107
PHM+VV+DLVPD+ +FY QYKSIQ +L + L + +N++S + L
Sbjct: 116 PHMFVVRDLVPDLTHFYKQYKSIQPYLQR--ETLPSDGRENLQSIEDRAKLDGLYECILC 173
Query: 108 AAASSAVPA------EKPAKYKTFAIYRWNPDKPDE 137
A S++ P+ E YRW D DE
Sbjct: 174 ACCSTSCPSYWWNQQEYLGPAVLMQAYRWLIDSRDE 209
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L KID + K +KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 92 GINTLACLCKIDKDTSKDTKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQRE 145
>gi|344234646|gb|EGV66514.1| hypothetical protein CANTEDRAFT_112235 [Candida tenuis ATCC 10573]
Length = 259
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 161/262 (61%), Gaps = 54/262 (20%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN- 150
+ +T N + + A S+ + + KTF IYRWNPD P+ +P M+ Y++DLN
Sbjct: 1 MFKAITRLNTLGLRRTLATSA-----QEQRLKTFQIYRWNPDTPEIQPKMESYQIDLNQC 55
Query: 151 -----------------------------------------------KIDAN-DKVSKIY 162
KID + K KIY
Sbjct: 56 GPMVLDALLKVKNEHDASLTFRRSCREGICGSCAMNIGGTNTLACLCKIDQDASKDLKIY 115
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILC 222
PLPHM+VVKDLVPD+ +FY QYKSIQP+LQRD + LQS++DR KLDGLYECILC
Sbjct: 116 PLPHMFVVKDLVPDLTHFYKQYKSIQPYLQRDTLPTDGRENLQSIEDRAKLDGLYECILC 175
Query: 223 ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNC 282
ACCSTSCPSYWWN ++YLGPAVLMQAYRW+IDSRDE T R L++ S+YRCHTIMNC
Sbjct: 176 ACCSTSCPSYWWNQQEYLGPAVLMQAYRWLIDSRDEATKIRKEMLQNSMSLYRCHTIMNC 235
Query: 283 TRTCPKGLNPGRAIAEIKKLLS 304
+TCPKGLNPGRAIAEIKK L+
Sbjct: 236 AKTCPKGLNPGRAIAEIKKQLA 257
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 97/156 (62%), Gaps = 21/156 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL+K+KNE D +LTFRRSCREGICGSCAMNIGG NTLAC+ KID + K KIYPL
Sbjct: 58 MVLDALLKVKNEHDASLTFRRSCREGICGSCAMNIGGTNTLACLCKIDQDASKDLKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LS 107
PHM+VVKDLVPD+ +FY QYKSIQ +L L T +N++S + L
Sbjct: 118 PHMFVVKDLVPDLTHFYKQYKSIQPYLQR--DTLPTDGRENLQSIEDRAKLDGLYECILC 175
Query: 108 AAASSAVPA------EKPAKYKTFAIYRWNPDKPDE 137
A S++ P+ E YRW D DE
Sbjct: 176 ACCSTSCPSYWWNQQEYLGPAVLMQAYRWLIDSRDE 211
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID + K KIYPLPHM+VVKDLVPD+ +FY QYKSIQP+L R
Sbjct: 99 ACLCKIDQDASKDLKIYPLPHMFVVKDLVPDLTHFYKQYKSIQPYLQR 146
>gi|341890452|gb|EGT46387.1| hypothetical protein CAEBREN_09832 [Caenorhabditis brenneri]
gi|341895828|gb|EGT51763.1| hypothetical protein CAEBREN_03271 [Caenorhabditis brenneri]
Length = 282
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 161/255 (63%), Gaps = 52/255 (20%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------ 150
P + + KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 30 PKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRR 89
Query: 151 ------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY
Sbjct: 90 SCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYA 149
Query: 186 SIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
SIQPW+Q+ +G Q QS+ +R +LDGLYECILCACCSTSCPSYWWN +KYLGPAV
Sbjct: 150 SIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAV 209
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
LMQAYRW+IDSRD+ +RL+++ D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+
Sbjct: 210 LMQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLT 269
Query: 305 GLVKKDKPGLDTAAL 319
G K KP + +A
Sbjct: 270 GF--KSKPAAEPSAF 282
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KID++ K +KIYPL
Sbjct: 69 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 129 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 154
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 110 ACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 157
>gi|310790958|gb|EFQ26491.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Glomerella graminicola M1.001]
Length = 277
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 153/246 (62%), Gaps = 49/246 (19%)
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS---- 159
A AS VP K + K F IYRWNPD P EKP MQEY +DLN +DA ++
Sbjct: 31 ATASDRVPRTKEPEMKKFTIYRWNPDTPTEKPRMQEYTLDLNKTGPMMLDALIRIKNELD 90
Query: 160 -----------------------------------------KIYPLPHMYVVKDLVPDMN 178
K+YPLPH YVVKDLVPD+
Sbjct: 91 PTLTFRRSCREGICGSCAMNINGQNTLACLCRIPKESSSDIKVYPLPHTYVVKDLVPDLT 150
Query: 179 NFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FY QY+SI+P+LQR +Y QS+ DRKKL GLYECILCACCSTSCPSYWWN E+
Sbjct: 151 QFYKQYRSIKPYLQRTTPAPDGKEYRQSVADRKKLSGLYECILCACCSTSCPSYWWNSEE 210
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPA+L+Q+YRW+ DSRDEK+A+R L + S+YRCHTI+NCTR CPKGLNPG+AIAE
Sbjct: 211 YLGPAILLQSYRWLADSRDEKSAERKAALDNSMSLYRCHTILNCTRACPKGLNPGKAIAE 270
Query: 299 IKKLLS 304
IKK ++
Sbjct: 271 IKKQMA 276
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 97/170 (57%), Gaps = 19/170 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I K+YPL
Sbjct: 77 MMLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPKESSSDIKVYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI----QRHLGGP------WKILGTLTAKNIRSFQLSAA 109
PH YVVKDLVPD+ FY QY+SI QR P + + L A
Sbjct: 137 PHTYVVKDLVPDLTQFYKQYRSIKPYLQRTTPAPDGKEYRQSVADRKKLSGLYECILCAC 196
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKID 153
S++ P+ +Y AI YRW D DEK E K L+N +
Sbjct: 197 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDEKSA--ERKAALDNSMS 244
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
K+YPLPH YVVKDLVPD+ FY QY+SI+P+L R+
Sbjct: 132 KVYPLPHTYVVKDLVPDLTQFYKQYRSIKPYLQRT 166
>gi|408394375|gb|EKJ73583.1| hypothetical protein FPSE_06201 [Fusarium pseudograminearum CS3096]
Length = 278
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 159/245 (64%), Gaps = 50/245 (20%)
Query: 110 ASSAVPAEKP-AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDANDKVS----- 159
AS + PA+ P +K K+F IYRWNPD P EKP +Q Y +DLN +DA ++
Sbjct: 31 ASVSEPAKGPESKLKSFQIYRWNPDTPSEKPRLQTYTLDLNKTGPMILDALIRIKNELDP 90
Query: 160 ----------------------------------------KIYPLPHMYVVKDLVPDMNN 179
KIYPLPH YVVKDLVPD+ +
Sbjct: 91 TLTFRRSCREGICGSCAMNINGQNTLACLCRIPTEAASDVKIYPLPHTYVVKDLVPDLTH 150
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FY QYKSI+P+LQRD +Y Q+ +DR+KLDGLYECILCACCSTSCPSYWWN E+Y
Sbjct: 151 FYKQYKSIKPYLQRDTPAEDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNSEEY 210
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPA+L+Q+YRW+ DSRD++TA+R L++ S+YRCHTI+NCTR CPKGLNPG+AIAEI
Sbjct: 211 LGPAILLQSYRWLADSRDQRTAERKQNLENSMSLYRCHTILNCTRACPKGLNPGKAIAEI 270
Query: 300 KKLLS 304
KK ++
Sbjct: 271 KKQMA 275
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI--DANDKVSKIYP 58
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I +A V KIYP
Sbjct: 76 MILDALIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTEAASDV-KIYP 134
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LPH YVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 135 LPHTYVVKDLVPDLTHFYKQYKSIKPYL 162
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
KIYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 131 KIYPLPHTYVVKDLVPDLTHFYKQYKSIKPYLQR 164
>gi|429242230|ref|NP_593530.2| succinate dehydrogenase iron-sulfur subunit protein
[Schizosaccharomyces pombe 972h-]
gi|391358193|sp|P21911.3|DHSB_SCHPO RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|347834099|emb|CAB86412.2| succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit
(predicted) [Schizosaccharomyces pombe]
Length = 275
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/264 (50%), Positives = 162/264 (61%), Gaps = 53/264 (20%)
Query: 92 ILGTLTAKNIRSFQLSA--AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
L +N R A +A+SA P + KTF IYRWNP+KP+ KP +Q+Y VDL
Sbjct: 12 FLKHFVNRNARMMATEANISATSANPQSQGENLKTFEIYRWNPEKPEVKPKLQKYTVDLT 71
Query: 150 N------------------------------------------------KIDANDKVSKI 161
I ++K +KI
Sbjct: 72 KCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKI 131
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENI-GNAQYLQSLDDRKKLDGLYECI 220
YPLPH ++VKDLVPD+ FY QYKSI+PWLQ D NI + ++ QS DR KLDGLYECI
Sbjct: 132 YPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQND--NIPKDKEFYQSRADRAKLDGLYECI 189
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN E+YLGPAVLMQAYRWIIDSRD+ TA RL+ +++ SVYRCHTIM
Sbjct: 190 LCACCSTSCPSYWWNSEEYLGPAVLMQAYRWIIDSRDQATAKRLDVMQNSMSVYRCHTIM 249
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NC RTCPKGLNPG AIA++K L++
Sbjct: 250 NCARTCPKGLNPGLAIAKVKALMA 273
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLACI I ++K +KIYPLP
Sbjct: 76 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKIYPLP 135
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H ++VKDLVPD+ FY QYKSI+ PW
Sbjct: 136 HCFIVKDLVPDLTYFYKQYKSIE-----PW 160
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + I ++K +KIYPLPH ++VKDLVPD+ FY QYKSI+PWL
Sbjct: 117 ACICNIKKDNKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWL 161
>gi|394986160|pdb|3VR8|B Chain B, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
gi|394986164|pdb|3VR8|F Chain F, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
gi|394986168|pdb|3VRB|B Chain B, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
gi|394986172|pdb|3VRB|F Chain F, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
gi|2662171|dbj|BAA23716.1| iron-sulfur subunit of succinate dehydrogenase [Ascaris suum]
Length = 282
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 157/242 (64%), Gaps = 50/242 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ KTF IYR+NP++P KP +Q++ VDL+ N++D
Sbjct: 34 RIKTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGI 93
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K +KIYPLPHM+V+KDLVPDMN FYAQY SIQPWL
Sbjct: 94 CGSCAMNIAGENTLACICNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPWL 153
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
Q+ K N+G Q QS+ +++KLDGLYECILCACCS SCPSYWWN +KYLGPAVLMQAYR
Sbjct: 154 QKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWWNADKYLGPAVLMQAYR 213
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
WIIDSRD+ A+RL +++D FS ++CHTIMNCT+TCPK LNP RAI EIK LL+ + K
Sbjct: 214 WIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKHLNPARAIGEIKMLLTKMKTKP 273
Query: 311 KP 312
P
Sbjct: 274 AP 275
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI ID N K +KIYPL
Sbjct: 67 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGENTLACICNIDQNTSKTTKIYPL 126
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+V+KDLVPDMN FYAQY SIQ PW
Sbjct: 127 PHMFVIKDLVPDMNLFYAQYASIQ-----PW 152
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + ID N K +KIYPLPHM+V+KDLVPDMN FYAQY SIQPWL +
Sbjct: 108 ACICNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQK 155
>gi|170579815|ref|XP_001894995.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein,
mitochondrial [Brugia malayi]
gi|158598226|gb|EDP36166.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein,
mitochondrial, putative [Brugia malayi]
Length = 279
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/258 (50%), Positives = 168/258 (65%), Gaps = 52/258 (20%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------- 150
Q++ ASS P K + KTF IYR+NP+KP +P +Q+Y +DL++
Sbjct: 17 QIARCASSTPPTGK--RVKTFEIYRYNPEKPGSQPQLQKYDIDLDDCGAMILDALIKIKN 74
Query: 151 ----------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVP 175
KID N K +KIYPLPHM+V+KDLVP
Sbjct: 75 EIDPTLTFRRSCREGICGSCAMNINGENTLACICKIDENTSKSTKIYPLPHMFVIKDLVP 134
Query: 176 DMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
DMN FYAQY SI+PWL++ +K +G Q Q+ +R+KL+GLYECILCACCSTSCPSYWW
Sbjct: 135 DMNLFYAQYASIEPWLKKKNKLVLGEKQMFQTEKEREKLNGLYECILCACCSTSCPSYWW 194
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N +KYLGPA+L+Q+YRW+IDSRD+ +RL+++ D FSV++CHTI+NCT+TCPK LNP +
Sbjct: 195 NADKYLGPAILLQSYRWMIDSRDDYAEERLSKIHDHFSVFKCHTILNCTKTCPKHLNPAK 254
Query: 295 AIAEIKKLLSGLVKKDKP 312
AI EIKKLL+G KK P
Sbjct: 255 AIGEIKKLLTGFDKKPAP 272
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 114/190 (60%), Gaps = 37/190 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI KID N K +KIYPL
Sbjct: 64 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGENTLACICKIDENTSKSTKIYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAKNIRSFQ------------- 105
PHM+V+KDLVPDMN FYAQY SI+ PW K L + FQ
Sbjct: 124 PHMFVIKDLVPDMNLFYAQYASIE-----PWLKKKNKLVLGEKQMFQTEKEREKLNGLYE 178
Query: 106 --LSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKID-ANDKVSKI 161
L A S++ P+ Y WN DK +Q Y+ ++++ D A +++SKI
Sbjct: 179 CILCACCSTSCPS-----------YWWNADKYLGPAILLQSYRWMIDSRDDYAEERLSKI 227
Query: 162 YPLPHMYVVK 171
+ H V K
Sbjct: 228 H--DHFSVFK 235
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y +N EK G +Q Y +D D L ++K DP +R R+C +
Sbjct: 38 YRYNPEK-PGSQPQLQKYDIDLDDCGAMILDALIKIKNEIDPTLTFR--------RSCRE 88
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N K +KIYPLPHM+V+KDLVPD
Sbjct: 89 GI-------------CGSCAMNINGENTLACICKIDENTSKSTKIYPLPHMFVIKDLVPD 135
Query: 347 MNNFYAQYKSIQPWLPR 363
MN FYAQY SI+PWL +
Sbjct: 136 MNLFYAQYASIEPWLKK 152
>gi|353523884|gb|AER08702.1| mitochondrial succinate dehydrogenase subunit B [Zymoseptoria
tritici]
Length = 297
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 151/234 (64%), Gaps = 49/234 (20%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
AK KTF IYRWNPD+P +KP MQ Y +DLN N++D
Sbjct: 61 AKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREG 120
Query: 156 -------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
K ++IYPLPH+YVVKDLVPDM FY QYKSI+P+
Sbjct: 121 ICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHIYVVKDLVPDMTQFYKQYKSIKPY 180
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQRD + QS+ DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YR
Sbjct: 181 LQRDTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYR 240
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
WI DSRDEKTA R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 241 WINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 294
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 95 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPL 154
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH+YVVKDLVPDM FY QYKSI+ +L
Sbjct: 155 PHIYVVKDLVPDMTQFYKQYKSIKPYL 181
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K ++IYPLPH+YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 131 GVNTLACLCRIPTDTAKETRIYPLPHIYVVKDLVPDMTQFYKQYKSIKPYLQR 183
>gi|291227290|ref|XP_002733638.1| PREDICTED: succinate dehydrogenase B-like [Saccoglossus
kowalevskii]
Length = 257
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 114/155 (73%), Positives = 139/155 (89%), Gaps = 2/155 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLD 208
KIDA +K +KIYPLPHMY++KDLVPDM+NFYAQYK I+P+L++ + N G+ QY QS++
Sbjct: 91 KIDARVNKTTKIYPLPHMYIIKDLVPDMSNFYAQYKEIEPYLKKKETVNYGDKQYFQSVE 150
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECILCACC+TSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ +R+ +L+
Sbjct: 151 DRAKLDGLYECILCACCTTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFQVERMAKLQ 210
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DPFS+YRCHTIMNCT+TCPK LNPGRAIAE+KKL+
Sbjct: 211 DPFSIYRCHTIMNCTKTCPKSLNPGRAIAEVKKLM 245
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI GVNTLACI KIDA +K +KIYPL
Sbjct: 46 MVLDALIKIKNEDDPTLTFRRSCREGICGSCAMNIAGVNTLACICKIDARVNKTTKIYPL 105
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY++KDLVPDM+NFYAQYK I+ +L
Sbjct: 106 PHMYIIKDLVPDMSNFYAQYKEIEPYL 132
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
+ G + G++T A + KIDA +K +KIYPLPHMY++KDLVPDM+NFYAQYK I+P+
Sbjct: 72 ICGSCAMNIAGVNTLACICKIDARVNKTTKIYPLPHMYIIKDLVPDMSNFYAQYKEIEPY 131
Query: 361 LPR 363
L +
Sbjct: 132 LKK 134
>gi|17533915|ref|NP_495992.1| Protein SDHB-1 [Caenorhabditis elegans]
gi|1706423|sp|Q09545.1|DHSB_CAEEL RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|3876930|emb|CAA87780.1| Protein SDHB-1 [Caenorhabditis elegans]
Length = 298
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 154/239 (64%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 52 RIKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGI 111
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+
Sbjct: 112 CGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWI 171
Query: 192 QRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
Q+ +G Q QS+ +R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 172 QKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 231
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ +RL+++ D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+G K
Sbjct: 232 WVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTGFTSK 290
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KID++ K +KIYPL
Sbjct: 85 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPL 144
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 145 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 170
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 126 ACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 173
>gi|330929240|ref|XP_003302561.1| hypothetical protein PTT_14436 [Pyrenophora teres f. teres 0-1]
gi|311321967|gb|EFQ89326.1| hypothetical protein PTT_14436 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 151/236 (63%), Gaps = 49/236 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
K AK KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 69 KDAKTKTFHIYRWNPDEPTSKPKMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCR 128
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K S+IYPLPHMYVVKDLVPDM FY QY+S++
Sbjct: 129 EGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVK 188
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+
Sbjct: 189 PYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQS 248
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRDEK A+R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 YRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 103/175 (58%), Gaps = 31/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PHMYVVKDLVPDM FY QY+S++ +L T A + R F+
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYLQ------RTTAAPDGREFRQSKEDRKKLDGLYE 218
Query: 106 --LSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ E YRW D DEK E + LNN +
Sbjct: 219 CILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEK--KAERQDALNNSM 271
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 141 GVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 194
>gi|367019158|ref|XP_003658864.1| hypothetical protein MYCTH_2295190 [Myceliophthora thermophila ATCC
42464]
gi|347006131|gb|AEO53619.1| hypothetical protein MYCTH_2295190 [Myceliophthora thermophila ATCC
42464]
Length = 280
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 153/246 (62%), Gaps = 49/246 (19%)
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID 153
A S A + + KTF IYRWNPD P EKP MQ Y +DLN N++D
Sbjct: 34 AQVSDATASGDKPRLKTFQIYRWNPDTPTEKPRMQSYTLDLNKTGPMVLDALIRIKNELD 93
Query: 154 -----------------------------------ANDKVSKIYPLPHMYVVKDLVPDMN 178
+ KIYPLPH YVVKDLVPD+
Sbjct: 94 PTLTFRRSCREGICGSCAMNINGTNTLACLCRIPREDSSDMKIYPLPHTYVVKDLVPDLT 153
Query: 179 NFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FY QYKSI+P+LQRD + +Y QS +DRKKLDGLYECILCACCSTSCPSYWWN E+
Sbjct: 154 QFYKQYKSIKPYLQRDTPSPDGKEYRQSREDRKKLDGLYECILCACCSTSCPSYWWNSEE 213
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPA+L+Q+YRW+ DSRDE+ A+R L + S+YRCHTI+NCTRTCPKGLNPG AIA+
Sbjct: 214 YLGPAILLQSYRWLADSRDERKAERKEALNNSMSLYRCHTILNCTRTCPKGLNPGLAIAQ 273
Query: 299 IKKLLS 304
IKK ++
Sbjct: 274 IKKEMA 279
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I D KIYPL
Sbjct: 80 MVLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPREDSSDMKIYPL 139
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 140 PHTYVVKDLVPDLTQFYKQYKSIKPYL 166
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I D KIYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 121 ACLCRIPREDSSDMKIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 168
>gi|336463954|gb|EGO52194.1| hypothetical protein NEUTE1DRAFT_118669 [Neurospora tetrasperma
FGSC 2508]
Length = 282
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/258 (51%), Positives = 159/258 (61%), Gaps = 49/258 (18%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
L A+ + + A S +E+ K KTF IYRWNPD P EKP MQ Y +DLN
Sbjct: 24 LAARGMANLADGATQSQQASSEQSPKLKTFQIYRWNPDTPTEKPRMQSYTLDLNKTGPMV 83
Query: 150 --------NKIDA-----------------------------------NDKVSKIYPLPH 166
N++D N KIYPLPH
Sbjct: 84 LDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPH 143
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
YVVKDLVPD+ FY QYKSI+P+LQRD + +Y QS DRKKLDGLYECILCACCS
Sbjct: 144 TYVVKDLVPDLTLFYKQYKSIKPYLQRDTPSPDGKEYRQSKADRKKLDGLYECILCACCS 203
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+TA+R + L + S+YRCHTI+NCTRTC
Sbjct: 204 TSCPSYWWNSEEYLGPAILLQSYRWLADSRDERTAERKDALNNSMSLYRCHTILNCTRTC 263
Query: 287 PKGLNPGRAIAEIKKLLS 304
PKGLNPG AIA IKK L+
Sbjct: 264 PKGLNPGLAIANIKKELA 281
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A++ KIYPL
Sbjct: 82 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 142 PHTYVVKDLVPDLTLFYKQYKSIKPYL 168
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 26/123 (21%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 69 MQSYTLDLNKTGPMVLDALVRIKNELDPTLTFR--------RSCREGI------------ 108
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A L +I A++ KIYPLPH YVVKDLVPD+ FY QYKSI+P+
Sbjct: 109 -CGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPY 167
Query: 361 LPR 363
L R
Sbjct: 168 LQR 170
>gi|378725444|gb|EHY51903.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Exophiala dermatitidis NIH/UT8656]
Length = 297
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 154/237 (64%), Gaps = 49/237 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
+K A+ KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 59 DKDARIKTFHIYRWNPDEPTSKPRMQTYTLDLNKTGPMVLDALIRIKNEVDPTLTFRRSC 118
Query: 156 ----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
K S+IYPLPH YVVKDLVPD+ +FY QYKSI
Sbjct: 119 REGICGSCAMNIDGVNTLACLCRIPTDTGKESRIYPLPHTYVVKDLVPDLTHFYKQYKSI 178
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+P+LQRD ++ ++ QS DRKKLDGLYECILCACCSTSCPSYWWN ++YLGPA+L+Q
Sbjct: 179 KPFLQRDTKSPDGKEFRQSPADRKKLDGLYECILCACCSTSCPSYWWNSDQYLGPAILLQ 238
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRW+ DSRDE+ A+R L + S+YRCHTI+NC+RTCPKGLNP +AIAEIKK LS
Sbjct: 239 SYRWLADSRDERKAERKEALDNSMSLYRCHTILNCSRTCPKGLNPAKAIAEIKKSLS 295
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 96 MVLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTGKESRIYPL 155
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ +FY QYKSI+ L
Sbjct: 156 PHTYVVKDLVPDLTHFYKQYKSIKPFL 182
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ +FY QYKSI+P+L R
Sbjct: 132 GVNTLACLCRIPTDTGKESRIYPLPHTYVVKDLVPDLTHFYKQYKSIKPFLQR 184
>gi|85116983|ref|XP_965152.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Neurospora crassa OR74A]
gi|28926956|gb|EAA35916.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Neurospora crassa OR74A]
gi|38567031|emb|CAE76329.1| probable succinate dehydrogenase (ubiquinone) iron-sulfur protein
precursor [Neurospora crassa]
Length = 282
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 149/233 (63%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDA------------ 154
K KTF IYRWNPD P EKP MQ Y +DLN N++D
Sbjct: 49 KLKTFQIYRWNPDTPTEKPRMQSYTLDLNKTGPMVLDALVRIKNELDPTLTFRRSCREGI 108
Query: 155 -----------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
N KIYPLPH YVVKDLVPD+ FY QYKSI+P+L
Sbjct: 109 CGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPYL 168
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QRD + +Y QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW
Sbjct: 169 QRDTPSPDGKEYRQSKADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRW 228
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+ DSRDE+TA+R + L + S+YRCHTI+NCTRTCPKGLNPG AIA IKK L+
Sbjct: 229 LADSRDERTAERKDALNNSMSLYRCHTILNCTRTCPKGLNPGLAIANIKKELA 281
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A++ KIYPL
Sbjct: 82 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 142 PHTYVVKDLVPDLTLFYKQYKSIKPYL 168
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 26/123 (21%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 69 MQSYTLDLNKTGPMVLDALVRIKNELDPTLTFR--------RSCREGI------------ 108
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A L +I A++ KIYPLPH YVVKDLVPD+ FY QYKSI+P+
Sbjct: 109 -CGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPY 167
Query: 361 LPR 363
L R
Sbjct: 168 LQR 170
>gi|448104820|ref|XP_004200345.1| Piso0_002930 [Millerozyma farinosa CBS 7064]
gi|448107981|ref|XP_004200976.1| Piso0_002930 [Millerozyma farinosa CBS 7064]
gi|359381767|emb|CCE80604.1| Piso0_002930 [Millerozyma farinosa CBS 7064]
gi|359382532|emb|CCE79839.1| Piso0_002930 [Millerozyma farinosa CBS 7064]
Length = 267
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 156/253 (61%), Gaps = 49/253 (19%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+R +S A AE+ K F IYRWNPD P+ P M+ Y+VDLN
Sbjct: 13 LRKQTMSGLRGLATSAEQAPNIKKFQIYRWNPDTPEVAPQMKTYEVDLNKCGPMVLDAIL 72
Query: 150 ---NKIDAN-----------------------------------DKVSKIYPLPHMYVVK 171
N+ DA K KIYPLPHM+VV+
Sbjct: 73 KIKNEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDRDTSKDLKIYPLPHMFVVR 132
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLVPD+ +FY QYKSIQP+LQR+ + LQS++DR KLDGLYECILCACCSTSCPS
Sbjct: 133 DLVPDLTHFYKQYKSIQPYLQRETHPADGRENLQSVEDRAKLDGLYECILCACCSTSCPS 192
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN ++YLGPAVLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNC RTCPKGLN
Sbjct: 193 YWWNQQQYLGPAVLMQAYRWLIDSRDQASKARKEMLQNSMSLYRCHTIMNCARTCPKGLN 252
Query: 292 PGRAIAEIKKLLS 304
PG+AIAEIKK L+
Sbjct: 253 PGKAIAEIKKQLA 265
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDA++KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ +ID + K KIYPL
Sbjct: 66 MVLDAILKIKNEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIDRDTSKDLKIYPL 125
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ +L
Sbjct: 126 PHMFVVRDLVPDLTHFYKQYKSIQPYL 152
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L +ID + K KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 107 ACLCRIDRDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQRE 155
>gi|350296030|gb|EGZ77007.1| putative succinate dehydrogenase iron-sulfur protein precursor
[Neurospora tetrasperma FGSC 2509]
Length = 282
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 149/233 (63%), Gaps = 49/233 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDA------------ 154
K KTF IYRWNPD P EKP MQ Y +DLN N++D
Sbjct: 49 KLKTFQIYRWNPDTPTEKPRMQSYALDLNKTGPMVLDALVRIKNELDPTLTFRRSCREGI 108
Query: 155 -----------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
N KIYPLPH YVVKDLVPD+ FY QYKSI+P+L
Sbjct: 109 CGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPYL 168
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QRD + +Y QS DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW
Sbjct: 169 QRDTPSPDGKEYRQSKADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRW 228
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+ DSRDE+TA+R + L + S+YRCHTI+NCTRTCPKGLNPG AIA IKK L+
Sbjct: 229 LADSRDERTAERKDALNNSMSLYRCHTILNCTRTCPKGLNPGLAIANIKKELA 281
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A++ KIYPL
Sbjct: 82 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 142 PHTYVVKDLVPDLTLFYKQYKSIKPYL 168
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 26/123 (21%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 69 MQSYALDLNKTGPMVLDALVRIKNELDPTLTFR--------RSCREGI------------ 108
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A L +I A++ KIYPLPH YVVKDLVPD+ FY QYKSI+P+
Sbjct: 109 -CGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPY 167
Query: 361 LPR 363
L R
Sbjct: 168 LQR 170
>gi|295841395|dbj|BAJ07111.1| succinate dehydrogenase subunit B [Corynespora cassiicola]
Length = 307
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 153/237 (64%), Gaps = 49/237 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
+K AK KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 69 DKDAKTKTFHIYRWNPDEPTSKPKMQTYTLDLNKTGPMMLDALIRIKNELDPTLTFRRSC 128
Query: 156 ----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
K S+IYPLPHMY+VKDLVPDM FY QY+S+
Sbjct: 129 REGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYIVKDLVPDMTLFYKQYRSV 188
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+P+LQRD +Y QS ++RKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q
Sbjct: 189 KPYLQRDTPAPDGREYRQSKEERKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQ 248
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRWI DSRDEKTA R + L + S+YRC+TI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 SYRWIADSRDEKTAQRQDALNNSMSMYRCYTILNCSRTCPKGLNPALAIAEIKKSMA 305
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 106 MMLDALIRIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 165
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPDM FY QY+S++ +L
Sbjct: 166 PHMYIVKDLVPDMTLFYKQYRSVKPYL 192
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPHMY+VKDLVPDM FY QY+S++P+L R
Sbjct: 142 GVNTLACLCRIPTDTTKESRIYPLPHMYIVKDLVPDMTLFYKQYRSVKPYLQR 194
>gi|353523886|gb|AER08703.1| mitochondrial succinate dehydrogenase subunit B [Zymoseptoria
tritici]
Length = 297
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 150/234 (64%), Gaps = 49/234 (20%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
AK KTF IYRWNPD+P +KP MQ Y +DLN N++D
Sbjct: 61 AKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREG 120
Query: 156 -------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+
Sbjct: 121 ICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPY 180
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQRD + QS+ DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YR
Sbjct: 181 LQRDTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYR 240
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
WI DSRDEKTA R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 241 WINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 294
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 95 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPL 154
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 155 PHTYVVKDLVPDMTQFYKQYKSIKPYL 181
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 131 GVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 183
>gi|195047714|ref|XP_001992397.1| GH24727 [Drosophila grimshawi]
gi|193893238|gb|EDV92104.1| GH24727 [Drosophila grimshawi]
Length = 331
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 158/250 (63%), Gaps = 54/250 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ KT IYRW KP ++PTMQ+Y++DL+
Sbjct: 80 RMKTLEIYRW---KPGDQPTMQKYQLDLDECGPMVLDALIKIKSEIDPTLTFRRSCREGI 136
Query: 150 -----------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+++D N + SKI+PLPH+YV +DLVPDM+ FY QY+SI+PWL
Sbjct: 137 CGSCAMNIDGLNTLACIHELDTNVARTSKIHPLPHLYVRRDLVPDMDEFYNQYQSIEPWL 196
Query: 192 QRD--KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
QRD E +G AQYLQS++DR KLDGLYECILC CC TSCPSYWWN +KYLGPAVLMQAY
Sbjct: 197 QRDNISEELGRAQYLQSVEDRSKLDGLYECILCGCCQTSCPSYWWNSDKYLGPAVLMQAY 256
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
RWIIDSRDE RL QL D + +YRCHTI+NC TCPK LNP +AI ++K+LL G KK
Sbjct: 257 RWIIDSRDEAAEHRLGQLIDTWKLYRCHTILNCINTCPKNLNPAKAILQLKQLLQGTTKK 316
Query: 310 DKPGLDTAAL 319
KP L T L
Sbjct: 317 CKPKLQTDEL 326
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 77/91 (84%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIK+E+DPTLTFRRSCREGICGSCAMNI G+NTLACI ++D N + SKI+PL
Sbjct: 110 MVLDALIKIKSEIDPTLTFRRSCREGICGSCAMNIDGLNTLACIHELDTNVARTSKIHPL 169
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YV +DLVPDM+ FY QY+SI+ PW
Sbjct: 170 PHLYVRRDLVPDMDEFYNQYQSIE-----PW 195
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 26/128 (20%)
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
G MQ Y+ +D D L ++K DP +R R+C +G+
Sbjct: 92 GDQPTMQKYQLDLDECGPMVLDALIKIKSEIDPTLTFR--------RSCREGI------- 136
Query: 298 EIKKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 355
G + GL+T A +H++D N + SKI+PLPH+YV +DLVPDM+ FY QY+
Sbjct: 137 ------CGSCAMNIDGLNTLACIHELDTNVARTSKIHPLPHLYVRRDLVPDMDEFYNQYQ 190
Query: 356 SIQPWLPR 363
SI+PWL R
Sbjct: 191 SIEPWLQR 198
>gi|328352626|emb|CCA39024.1| DNA ligase 1 [Komagataella pastoris CBS 7435]
Length = 1087
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 149/240 (62%), Gaps = 49/240 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
LS A ++ + K+F +YRW+PD P+ KP MQEYK+DLN
Sbjct: 18 LSVVRGLATVSQNQPRLKSFKVYRWSPDTPEIKPHMQEYKIDLNECGPMVLDALLKIKNE 77
Query: 151 ---------------------------------KIDANDKVS-KIYPLPHMYVVKDLVPD 176
KID N+ KIYPLPHM+VV+DLVPD
Sbjct: 78 QDATLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESTELKIYPLPHMFVVRDLVPD 137
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ +FY QYKSIQP+LQRD + LQS++DRKKLDGLYECILCACCSTSCPSYWWN
Sbjct: 138 LTHFYKQYKSIQPFLQRDSVPSDGKENLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQ 197
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
++YLGPAVLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNC RTCPKGLNPG I
Sbjct: 198 QEYLGPAVLMQAYRWLIDSRDQASVARKEMLQNSMSLYRCHTIMNCARTCPKGLNPGTLI 257
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ KID N+ KIYPL
Sbjct: 66 MVLDALLKIKNEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCKIDQNESTELKIYPL 125
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ L
Sbjct: 126 PHMFVVRDLVPDLTHFYKQYKSIQPFL 152
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID N+ KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 107 ACLCKIDQNESTELKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPFLQR 154
>gi|398394589|ref|XP_003850753.1| succinate dehydrogenase (ubiquinone) iron-sulfur subunit
[Zymoseptoria tritici IPO323]
gi|3334166|sp|O42772.1|DHSB_MYCGR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|2801670|gb|AAB97419.1| succinate dehydrogenase iron-sulphur protein [Zymoseptoria tritici]
gi|339470632|gb|EGP85729.1| succinate dehydrogenase iron-sulfur protein [Zymoseptoria tritici
IPO323]
gi|353523888|gb|AER08704.1| mitochondrial succinate dehydrogenase subunit B [Zymoseptoria
tritici]
gi|353523890|gb|AER08705.1| mitochondrial succinate dehydrogenase subunit B [Zymoseptoria
tritici]
gi|353523892|gb|AER08706.1| mitochondrial succinate dehydrogenase subunit B [Zymoseptoria
tritici]
Length = 297
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 150/234 (64%), Gaps = 49/234 (20%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
AK KTF IYRWNPD+P +KP MQ Y +DLN N++D
Sbjct: 61 AKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREG 120
Query: 156 -------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+
Sbjct: 121 ICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPY 180
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQRD + QS+ DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YR
Sbjct: 181 LQRDTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYR 240
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
WI DSRDEKTA R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 241 WINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 294
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 95 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPL 154
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 155 PHTYVVKDLVPDMTQFYKQYKSIKPYL 181
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 131 GVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 183
>gi|67523753|ref|XP_659936.1| hypothetical protein AN2332.2 [Aspergillus nidulans FGSC A4]
gi|40745287|gb|EAA64443.1| hypothetical protein AN2332.2 [Aspergillus nidulans FGSC A4]
gi|259487728|tpe|CBF86624.1| TPA: iron-sulfur protein subunit of succinate dehydrogenase Sdh2,
putative (AFU_orthologue; AFUA_5G10370) [Aspergillus
nidulans FGSC A4]
Length = 273
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 160/255 (62%), Gaps = 50/255 (19%)
Query: 101 IRSFQLSAAASSAVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------- 149
R + + ++ A++PA + K F +YRWNPDKP EKP MQ Y++DL
Sbjct: 18 FRPATFARSYATVESAQEPAPQMKKFQVYRWNPDKPSEKPKMQTYELDLKKTGPMMLDAL 77
Query: 150 ----NKIDAN-----------------------------------DKVSKIYPLPHMYVV 170
N+ID K S+IYPLPH YVV
Sbjct: 78 IRIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVV 137
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
KDLVPD+ Y QYKSI+P+LQRD + + QS +DRKKLDGLYECILC CCSTSCP
Sbjct: 138 KDLVPDLTQIYKQYKSIKPYLQRDTKTEDGLENRQSPEDRKKLDGLYECILCFCCSTSCP 197
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN E+YLGPA+L+Q+YRW+ DSRD+KTA+R + + + SVYRCHTI+NCTRTCPKGL
Sbjct: 198 SYWWNSEEYLGPAILLQSYRWLADSRDQKTAERKHAIDNSMSVYRCHTILNCTRTCPKGL 257
Query: 291 NPGRAIAEIKKLLSG 305
NP RAI+EIKK+L+
Sbjct: 258 NPARAISEIKKMLAA 272
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 100/164 (60%), Gaps = 17/164 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 72 MMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN----------IRSFQLSAA 109
PH YVVKDLVPD+ Y QYKSI+ +L K L + + L
Sbjct: 132 PHTYVVKDLVPDLTQIYKQYKSIKPYLQRDTKTEDGLENRQSPEDRKKLDGLYECILCFC 191
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ +Y AI YRW D D+K +++ +D
Sbjct: 192 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQKTAERKHAID 235
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ Y QYKSI+P+L R
Sbjct: 108 GVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTQIYKQYKSIKPYLQR 160
>gi|223670642|emb|CAT00089.1| succinate dehydrogenase iron-sulfur subunit [Hebeloma
cylindrosporum]
Length = 270
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 159/252 (63%), Gaps = 50/252 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
R+F S + AVP +KP K F IYRWNPD+P++KP ++ +K+DLN
Sbjct: 18 RAFSSSVSRWQAVPQQKPVLMKEFKIYRWNPDQPEKKPELESFKIDLNQTGPMVLDALIK 77
Query: 150 --NKID-----------------------------------ANDKVSKIYPLPHMYVVKD 172
N++D K +KIYPLPHMYVVKD
Sbjct: 78 IKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREGSKDTKIYPLPHMYVVKD 137
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPDM FY QYKSIQPWLQ D G ++LQS +DRKKLDG+YECILCACCSTSCPSY
Sbjct: 138 LVPDMTLFYKQYKSIQPWLQNDNPPSG-TEHLQSPEDRKKLDGMYECILCACCSTSCPSY 196
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPA LMQAYRW+ DSRD A+R +L++ S+YRC TI NC+RTCPKGLNP
Sbjct: 197 WWNQDEYLGPATLMQAYRWLADSRDTNGAERREKLQNEMSLYRCLTIFNCSRTCPKGLNP 256
Query: 293 GRAIAEIKKLLS 304
+AIA++K L+
Sbjct: 257 AQAIAQLKLELA 268
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID K +KIYPL
Sbjct: 70 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREGSKDTKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPDM FY QYKSIQ PW
Sbjct: 130 PHMYVVKDLVPDMTLFYKQYKSIQ-----PW 155
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID K +KIYPLPHMYVVKDLVPDM FY QYKSIQPWL
Sbjct: 111 ACLCRIDREGSKDTKIYPLPHMYVVKDLVPDMTLFYKQYKSIQPWL 156
>gi|396478650|ref|XP_003840583.1| similar to succinate dehydrogenase iron-sulfur protein subunit
[Leptosphaeria maculans JN3]
gi|312217155|emb|CBX97104.1| similar to succinate dehydrogenase iron-sulfur protein subunit
[Leptosphaeria maculans JN3]
Length = 306
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 162/272 (59%), Gaps = 52/272 (19%)
Query: 85 HLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKP---AKYKTFAIYRWNPDKPDEKPTM 141
H P +G + +S +S + +P AK KTF IYRWNPD+P KP M
Sbjct: 33 HARDPISKVGEKIVPDAARKPVSEKETSTIKEPEPTKDAKTKTFHIYRWNPDEPSSKPKM 92
Query: 142 QEYKVDLN--------------NKIDAN-------------------------------- 155
Q Y +DLN N++D
Sbjct: 93 QSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIP 152
Query: 156 ---DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
K S+IYPLPHMYVVKDLVPDM FY QY+S++P+LQR +Y Q+ +DRKK
Sbjct: 153 TDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRTTPAPDGREYRQTKEDRKK 212
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YRWI DSRDE+ A+R + L + S
Sbjct: 213 LDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDERKAERQDALNNSMS 272
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 273 LYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM FY QY+S++ +L
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYL 191
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 141 GVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 194
>gi|2662173|dbj|BAA23717.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase
[Caenorhabditis elegans]
Length = 297
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 154/239 (64%), Gaps = 50/239 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 51 RIKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGI 110
Query: 151 ------------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+
Sbjct: 111 CGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWI 170
Query: 192 QRDKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
Q+ +G Q QS+ +R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYR
Sbjct: 171 QKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYR 230
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
W+IDSRD+ +RL+++ D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+G K
Sbjct: 231 WVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTGFTSK 289
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 79/91 (86%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KID++ K +KIYPL
Sbjct: 84 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPL 143
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 144 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 169
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 125 ACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 172
>gi|393234301|gb|EJD41865.1| succinate dehydrogenase iron-sulfur subunit [Auricularia delicata
TFB-10046 SS5]
Length = 267
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/259 (51%), Positives = 158/259 (61%), Gaps = 51/259 (19%)
Query: 92 ILGTLTAKN-IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
IL TA R+F S AA A P EK K F IYRWNPD+PD+KP +Q YKVDLN
Sbjct: 4 ILRRSTATTATRAFSTSRAALLAAPVEKQPLVKEFKIYRWNPDEPDKKPHLQSYKVDLNQ 63
Query: 151 ------------------------------------------------KIDAN-DKVSKI 161
+ID N K SKI
Sbjct: 64 CGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRNPSKDSKI 123
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECIL 221
YPLPHMY+VKDLVPD+ FY QYKSI+PWLQ D + ++LQS +DRKKLDG+YECIL
Sbjct: 124 YPLPHMYIVKDLVPDLTQFYKQYKSIEPWLQNDNPP-ADREHLQSQEDRKKLDGMYECIL 182
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCSTSCPSYWWN ++YLGPA LMQAYRW+ DSRD A R ++++ S+YRCHTI N
Sbjct: 183 CACCSTSCPSYWWNQDEYLGPAALMQAYRWMADSRDTAEAARKEKMQNTLSLYRCHTIFN 242
Query: 282 CTRTCPKGLNPGRAIAEIK 300
C+RTCPK LNP AIA++K
Sbjct: 243 CSRTCPKSLNPAEAIAKMK 261
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N K SKIYPL
Sbjct: 67 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRNPSKDSKIYPL 126
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMY+VKDLVPD+ FY QYKSI+ PW
Sbjct: 127 PHMYIVKDLVPDLTQFYKQYKSIE-----PW 152
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID N K SKIYPLPHMY+VKDLVPD+ FY QYKSI+PWL
Sbjct: 108 ACLCRIDRNPSKDSKIYPLPHMYIVKDLVPDLTQFYKQYKSIEPWL 153
>gi|254585531|ref|XP_002498333.1| ZYRO0G07788p [Zygosaccharomyces rouxii]
gi|238941227|emb|CAR29400.1| ZYRO0G07788p [Zygosaccharomyces rouxii]
Length = 263
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 159/254 (62%), Gaps = 53/254 (20%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------- 150
N + Q A ++AV + K F +YRW+PD+P +KP +Q ++VDLN
Sbjct: 12 NGLNLQRGLATATAVAP----RLKNFKVYRWSPDEPSKKPYLQTFQVDLNECGPMVLDAL 67
Query: 151 ---------------------------------------KIDAND-KVSKIYPLPHMYVV 170
KID N+ K K+YPLPHMY+V
Sbjct: 68 LKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKDLKVYPLPHMYIV 127
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
KDLVPD+ NFY QYKSIQP+LQR + LQS++DRKKLDGLYECILCACCSTSCP
Sbjct: 128 KDLVPDLTNFYQQYKSIQPYLQRKSYPEDGKEILQSVEDRKKLDGLYECILCACCSTSCP 187
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN E+YLGPAVL+QAYRW+IDSRD+ R L++ S+YRCHTIMNCTRTCPKGL
Sbjct: 188 SYWWNQEQYLGPAVLLQAYRWLIDSRDQAAQTRKAMLQNTMSLYRCHTIMNCTRTCPKGL 247
Query: 291 NPGRAIAEIKKLLS 304
NPG AIAEIKK L+
Sbjct: 248 NPGLAIAEIKKELA 261
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ KID N+ K K+YPL
Sbjct: 62 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCKIDQNESKDLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ NFY QYKSIQ +L
Sbjct: 122 PHMYIVKDLVPDLTNFYQQYKSIQPYL 148
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID N+ K K+YPLPHMY+VKDLVPD+ NFY QYKSIQP+L R
Sbjct: 103 ACLCKIDQNESKDLKVYPLPHMYIVKDLVPDLTNFYQQYKSIQPYLQR 150
>gi|195030288|ref|XP_001988000.1| GH10931 [Drosophila grimshawi]
gi|193904000|gb|EDW02867.1| GH10931 [Drosophila grimshawi]
Length = 335
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 166/268 (61%), Gaps = 56/268 (20%)
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------- 149
+ ++ AS P E+ KTF IYRW KP +KP +Q+Y++D+N
Sbjct: 68 TCKVEMKASKPRPTER--SMKTFEIYRW---KPGDKPKLQKYEIDMNECGPMILDALIKI 122
Query: 150 -NKIDAN-----------------------------------DKVSKIYPLPHMYVVKDL 173
N++D +V +IYPLPH+YV +DL
Sbjct: 123 KNEMDPTLTFRRSCREGVCGSCAMNINGLNTLSCIQAIDRKPGRVCRIYPLPHLYVKRDL 182
Query: 174 VPDMNNFYAQYKSIQPWLQRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
VPD++ FY QY+SI+PWLQR N +G AQYLQ+++DR +LDGLYECILCACC T+CPS
Sbjct: 183 VPDLSRFYQQYQSIEPWLQRKDVNREVGKAQYLQAIEDRDRLDGLYECILCACCQTACPS 242
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN +KYLGPA+L+QAYRWIIDSRDE T RL L DPF VYRCHTI+NCT TCPK LN
Sbjct: 243 YWWNSDKYLGPAILLQAYRWIIDSRDEATDHRLCMLTDPFKVYRCHTILNCTNTCPKNLN 302
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAAL 319
P +AI ++K+LL+G+ KK P + L
Sbjct: 303 PAQAIIKLKQLLAGMTKKPAPKMQADQL 330
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNEMDPTLTFRRSCREG+CGSCAMNI G+NTL+CI ID +V +IYPL
Sbjct: 114 MILDALIKIKNEMDPTLTFRRSCREGVCGSCAMNINGLNTLSCIQAIDRKPGRVCRIYPL 173
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YV +DLVPD++ FY QY+SI+ PW
Sbjct: 174 PHLYVKRDLVPDLSRFYQQYQSIE-----PW 199
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
GL+T + + ID +V +IYPLPH+YV +DLVPD++ FY QY+SI+PWL R
Sbjct: 150 GLNTLSCIQAIDRKPGRVCRIYPLPHLYVKRDLVPDLSRFYQQYQSIEPWLQR 202
>gi|401887339|gb|EJT51329.1| succinate dehydrogenase iron-sulfur subunit [Trichosporon asahii
var. asahii CBS 2479]
gi|406696332|gb|EKC99623.1| succinate dehydrogenase iron-sulfur subunit [Trichosporon asahii
var. asahii CBS 8904]
Length = 286
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 160/273 (58%), Gaps = 59/273 (21%)
Query: 102 RSFQLSAAASSAVPAE---------KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--- 149
R SAA+ A P+E KP + K F IYRWNPD P EKP +Q YKVDLN
Sbjct: 17 RQLSTSAASQFAQPSESTATPAAGTKPPQIKEFKIYRWNPDTPSEKPKLQSYKVDLNQCG 76
Query: 150 ---------NKIDAN-----------------------------------DKVSKIYPLP 165
N++D K K+YPLP
Sbjct: 77 PMMLDALIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKDTSKPGKVYPLP 136
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
HMYVVKDLVPD+ FY QYKSIQPWL+ D N + LQS DRKKLDG+YECILCACC
Sbjct: 137 HMYVVKDLVPDLTLFYKQYKSIQPWLKHD--NPPKTEILQSQHDRKKLDGMYECILCACC 194
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWN ++YLGPAVLMQAYRWI DSRD+ T +R +L++ S+YRCHTI+NCTRT
Sbjct: 195 STSCPSYWWNQDQYLGPAVLMQAYRWIADSRDQATEERKEKLQNNMSLYRCHTILNCTRT 254
Query: 286 CPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
CPKGL PG AIA KL KK G+ A
Sbjct: 255 CPKGLRPGSAIA-FMKLEMATGKKASHGITEVA 286
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 74/91 (81%), Gaps = 8/91 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIK NEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +ID + K K+YPL
Sbjct: 78 MMLDALIK--NEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKDTSKPGKVYPL 135
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPD+ FY QYKSIQ PW
Sbjct: 136 PHMYVVKDLVPDLTLFYKQYKSIQ-----PW 161
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID + K K+YPLPHMYVVKDLVPD+ FY QYKSIQPWL
Sbjct: 112 GVNTLACLCRIDKDTSKPGKVYPLPHMYVVKDLVPDLTLFYKQYKSIQPWL 162
>gi|50551431|ref|XP_503189.1| YALI0D23397p [Yarrowia lipolytica]
gi|49649057|emb|CAG81389.1| YALI0D23397p [Yarrowia lipolytica CLIB122]
Length = 268
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 158/250 (63%), Gaps = 49/250 (19%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKV- 158
F A+++ P + K F IYRWNPD P++KP ++EY+VDL+ +DA K+
Sbjct: 17 FARGLASTAEAPKVPAPRIKKFGIYRWNPDTPEKKPELKEYEVDLSQCGPMVLDALIKIK 76
Query: 159 --------------------------------------------SKIYPLPHMYVVKDLV 174
KIYPLPHM+VV+DLV
Sbjct: 77 NEQDPTLTFRRSCREGICGSCAMNIEGRNTLACLCRINPDIAKEEKIYPLPHMFVVRDLV 136
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQRD+ + LQS+ DR+KLDGLYECILCACCSTSCPSYWW
Sbjct: 137 PDLTQFYKQYKSIEPYLQRDEVPADGKENLQSIADRRKLDGLYECILCACCSTSCPSYWW 196
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N ++YLGPAVLMQAYRW+IDSRDE TA R L++ S+YRCHTIMNC RTCPKGLNPG
Sbjct: 197 NQQEYLGPAVLMQAYRWMIDSRDEATAKRQQMLENSMSLYRCHTIMNCARTCPKGLNPGL 256
Query: 295 AIAEIKKLLS 304
AIA+IK+ ++
Sbjct: 257 AIAKIKRSMA 266
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I+ + K KIYPL
Sbjct: 67 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIEGRNTLACLCRINPDIAKEEKIYPL 126
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ FY QYKSI+ +L
Sbjct: 127 PHMFVVRDLVPDLTQFYKQYKSIEPYL 153
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I+ + K KIYPLPHM+VV+DLVPD+ FY QYKSI+P+L R
Sbjct: 108 ACLCRINPDIAKEEKIYPLPHMFVVRDLVPDLTQFYKQYKSIEPYLQR 155
>gi|451998552|gb|EMD91016.1| hypothetical protein COCHEDRAFT_1225045 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 151/236 (63%), Gaps = 49/236 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
K AK KTF +YRWNPD+P KP MQ Y +DLN N++D
Sbjct: 69 KDAKMKTFHVYRWNPDEPTSKPKMQSYTLDLNKTGPMMLDALIRIKNEMDPTLTFRRSCR 128
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K S+IYPLPHMYVVKDLVPDM FY QY+S++
Sbjct: 129 EGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVK 188
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+
Sbjct: 189 PYLQRSTPAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQS 248
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRDEK A+R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 YRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM FY QY+S++ +L
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYL 191
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L RS
Sbjct: 141 GVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRS 194
>gi|451848735|gb|EMD62040.1| hypothetical protein COCSADRAFT_122288 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 151/236 (63%), Gaps = 49/236 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
K AK KTF +YRWNPD+P KP MQ Y +DLN N++D
Sbjct: 69 KDAKMKTFHVYRWNPDEPTSKPKMQSYTLDLNKTGPMMLDALIRIKNEMDPTLTFRRSCR 128
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K S+IYPLPHMYVVKDLVPDM FY QY+S++
Sbjct: 129 EGICGSCAMNIDGVNTLACLCRIPTDAAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVK 188
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+
Sbjct: 189 PYLQRSTPAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQS 248
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRDEK A+R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 YRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDAAKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM FY QY+S++ +L
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYL 191
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L RS
Sbjct: 141 GVNTLACLCRIPTDAAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRS 194
>gi|384486931|gb|EIE79111.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Rhizopus
delemar RA 99-880]
Length = 278
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 160/253 (63%), Gaps = 49/253 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
RSF S + A K +KTF IYRWNPD+P EKP ++ YKVDLN+
Sbjct: 25 RSFSTSPSTMMASADTKQPNFKTFEIYRWNPDEPTEKPVLKTYKVDLNSCGPMILDALIK 84
Query: 151 -------------------------------------KIDAN-DKVSKIYPLPHMYVVKD 172
KID + K +KIYPLPHM +VKD
Sbjct: 85 IKNEQDSTLTFRRSCREGICGSCAMNIEGGNTLACISKIDRDTSKATKIYPLPHMNIVKD 144
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ +FY QYKSI+P+L++ + LQS++DR+KLDGLYECILCACCSTSCPSY
Sbjct: 145 LVPDLTHFYKQYKSIEPYLKQKTAAPEGKENLQSIEDRQKLDGLYECILCACCSTSCPSY 204
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN E+YLGPAVLMQAYRW+IDSRD+ +R +L++ S+YRCHTIMNC++TCPKGL P
Sbjct: 205 WWNQEEYLGPAVLMQAYRWMIDSRDQFGPERREKLQNKMSLYRCHTIMNCSKTCPKGLQP 264
Query: 293 GRAIAEIKKLLSG 305
G AIA+IK +++
Sbjct: 265 GTAIAKIKMMMAA 277
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE D TLTFRRSCREGICGSCAMNI G NTLACISKID + K +KIYPL
Sbjct: 77 MILDALIKIKNEQDSTLTFRRSCREGICGSCAMNIEGGNTLACISKIDRDTSKATKIYPL 136
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM +VKDLVPD+ +FY QYKSI+ +L
Sbjct: 137 PHMNIVKDLVPDLTHFYKQYKSIEPYL 163
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A + KID + K +KIYPLPHM +VKDLVPD+ +FY QYKSI+P+L
Sbjct: 114 GNTLACISKIDRDTSKATKIYPLPHMNIVKDLVPDLTHFYKQYKSIEPYL 163
>gi|158452925|gb|ABW39788.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
Length = 306
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 151/236 (63%), Gaps = 49/236 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
K AK KTF IYRWNPD+P KP M+ Y +DLN N++D
Sbjct: 69 KDAKTKTFHIYRWNPDEPTSKPKMRSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCR 128
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K S+IYPLPHMYVVKDLVPDM FY QY+S++
Sbjct: 129 EGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVK 188
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+
Sbjct: 189 PYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQS 248
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRDEK A+R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 YRWIADSRDEKKAERQDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 103/175 (58%), Gaps = 31/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PHMYVVKDLVPDM FY QY+S++ +L T A + R F+
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYLQ------RTTAAPDGREFRQSKEDRKKLDGLYE 218
Query: 106 --LSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ E YRW D DEK E + LNN +
Sbjct: 219 CILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEK--KAERQDALNNSM 271
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 141 GVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 194
>gi|405947958|gb|EKC17915.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Crassostrea gigas]
Length = 184
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 143/171 (83%), Gaps = 4/171 (2%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR---DKENIGNAQYLQS 206
KID N K +KIYPLPHMYV+KDLVPDM+NFYAQY+SI+P+L++ +NIG+ QYLQ+
Sbjct: 14 KIDDNLGKATKIYPLPHMYVIKDLVPDMSNFYAQYRSIEPYLKKKDGSDKNIGDKQYLQT 73
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW++DSRD+ T++RL Q
Sbjct: 74 TGDRAKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLMQAYRWMVDSRDDYTSERLFQ 133
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTA 317
++D FSVYRCHTIMNCT+TCPKGLNPG AI EIKK+L+ K+ L A
Sbjct: 134 MEDRFSVYRCHTIMNCTKTCPKGLNPGLAIGEIKKMLAKYNSKEAKQLAQA 184
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
Query: 33 MNIGGVNTLACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
MNIGG NTLAC+ KID N K +KIYPLPHMYV+KDLVPDM+NFYAQY+SI+ +L
Sbjct: 1 MNIGGSNTLACLCKIDDNLGKATKIYPLPHMYVIKDLVPDMSNFYAQYRSIEPYL 55
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID N K +KIYPLPHMYV+KDLVPDM+NFYAQY+SI+P+L +
Sbjct: 10 ACLCKIDDNLGKATKIYPLPHMYVIKDLVPDMSNFYAQYRSIEPYLKK 57
>gi|258572530|ref|XP_002545027.1| succinate dehydrogenase iron-sulfur protein [Uncinocarpus reesii
1704]
gi|237905297|gb|EEP79698.1| succinate dehydrogenase iron-sulfur protein [Uncinocarpus reesii
1704]
Length = 289
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 149/231 (64%), Gaps = 49/231 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA------------------------ 154
KTF IYRW+PD+P EKP MQ Y VDLN +DA
Sbjct: 57 KTFQIYRWDPDQPSEKPRMQSYTVDLNKTGPMVLDALIRIKNEEDPTLTFRRSCREGICG 116
Query: 155 ---------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
K ++IYPLPH YVVKDLVPD+ + Y QYKSI+P+LQR
Sbjct: 117 SCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDLTHLYKQYKSIKPYLQR 176
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ + + QS DRKKLDGLYECILC CCSTSCPSYWWN E+YLGPAVL+Q+YRW++
Sbjct: 177 ETKPEDGKEIRQSPADRKKLDGLYECILCFCCSTSCPSYWWNSEEYLGPAVLLQSYRWLV 236
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
DSRDEKTA+R L + SVYRCHTIMNCTRTCPKGLNPG+AIAEIKK L+
Sbjct: 237 DSRDEKTAERRAALDNSMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKKQLA 287
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 88 MVLDALIRIKNEEDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPL 147
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ + Y QYKSI+ +L
Sbjct: 148 PHTYVVKDLVPDLTHLYKQYKSIKPYL 174
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 42/139 (30%)
Query: 246 MQAYRWIIDSRDEK------TAD-------------RLNQLKDPFSVYRCHTIMNCTRTC 286
Q YRW D EK T D R+ +DP +R R+C
Sbjct: 59 FQIYRWDPDQPSEKPRMQSYTVDLNKTGPMVLDALIRIKNEEDPTLTFR--------RSC 110
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLV 344
+G+ G + G++T A L +I + K ++IYPLPH YVVKDLV
Sbjct: 111 REGI-------------CGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLV 157
Query: 345 PDMNNFYAQYKSIQPWLPR 363
PD+ + Y QYKSI+P+L R
Sbjct: 158 PDLTHLYKQYKSIKPYLQR 176
>gi|352089955|ref|ZP_08954192.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodanobacter sp. 2APBS1]
gi|389796983|ref|ZP_10200027.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter sp.
116-2]
gi|351678491|gb|EHA61637.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodanobacter sp. 2APBS1]
gi|388447816|gb|EIM03810.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter sp.
116-2]
Length = 260
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 159/238 (66%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------NNKID------- 153
PA+ K +TF IYRW+PD D+ P + Y+VDL N+ID
Sbjct: 19 PAKNAKKPRTFRIYRWSPDD-DQNPRIDTYEVDLAACGPMVLDALLKIKNEIDPTLTLRR 77
Query: 154 ------------------------ANDKVS----KIYPLPHMYVVKDLVPDMNNFYAQYK 185
A D V+ KIYPLPHM VVKDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACICAIDSVAAGDVKIYPLPHMPVVKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW+ R + + + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L
Sbjct: 138 SIKPWV-RTQSAVPDKERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIKKL+
Sbjct: 197 LQAYRWIVDSRDETTGERLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLM 254
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 73/93 (78%), Gaps = 10/93 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID---ANDKVSKIY 57
MVLDAL+KIKNE+DPTLT RRSCREGICGSCAMNI G NTLACI ID A D KIY
Sbjct: 57 MVLDALLKIKNEIDPTLTLRRSCREGICGSCAMNIDGTNTLACICAIDSVAAGD--VKIY 114
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPHM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 115 PLPHMPVVKDLVPDLTHFYAQYASIK-----PW 142
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Query: 318 ALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A+ + A D KIYPLPHM VVKDLVPD+ +FYAQY SI+PW+
Sbjct: 102 AIDSVAAGD--VKIYPLPHMPVVKDLVPDLTHFYAQYASIKPWV 143
>gi|449545442|gb|EMD36413.1| succinate dehydrogenase iron-sulfur subunit [Ceriporiopsis
subvermispora B]
Length = 262
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 155/247 (62%), Gaps = 49/247 (19%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------- 150
SA + AVP EKP KTF IYRWNPD+PD+KPT+Q Y +DLN
Sbjct: 16 SALRAQAVPTEKPVLEKTFKIYRWNPDEPDKKPTLQSYTIDLNQCGPMVLDALIKIKNEV 75
Query: 151 --------------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMN 178
+ID + K SKIYPLPHMYVVKDLVPD+
Sbjct: 76 DPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDTKESKIYPLPHMYVVKDLVPDLT 135
Query: 179 NFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238
FY QYKSI+P+L+ D + ++LQS +DR+KLDG+YECILCACCSTSCPSYWWN ++
Sbjct: 136 LFYKQYKSIEPYLKNDNPP-ADREFLQSPEDRRKLDGMYECILCACCSTSCPSYWWNQDE 194
Query: 239 YLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAE 298
YLGPA LM AYRW+ DSRD A R +L++ S+YRCHTI NC RTCPKGLNP AIA+
Sbjct: 195 YLGPATLMAAYRWMADSRDAYKAQRKEKLQNEMSLYRCHTIFNCARTCPKGLNPAAAIAK 254
Query: 299 IKKLLSG 305
IK L+
Sbjct: 255 IKLELAA 261
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 76/86 (88%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID + K SKIYPLP
Sbjct: 63 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDTKESKIYPLP 122
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMYVVKDLVPD+ FY QYKSI+ +L
Sbjct: 123 HMYVVKDLVPDLTLFYKQYKSIEPYL 148
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID + K SKIYPLPHMYVVKDLVPD+ FY QYKSI+P+L
Sbjct: 104 ACLCRIDRDTKESKIYPLPHMYVVKDLVPDLTLFYKQYKSIEPYL 148
>gi|452980162|gb|EME79923.1| hypothetical protein MYCFIDRAFT_51773 [Pseudocercospora fijiensis
CIRAD86]
Length = 299
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/248 (52%), Positives = 155/248 (62%), Gaps = 50/248 (20%)
Query: 107 SAAASSAVPAEKP-AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NK 151
S ++++ A+ P AK KTF IYRWNPD+P KP MQ Y +DLN N+
Sbjct: 50 SKSSTTGESAKDPNAKIKTFHIYRWNPDEPSSKPRMQTYTLDLNKTGPMMLDALIRIKNE 109
Query: 152 ID-----------------------------------ANDKVSKIYPLPHMYVVKDLVPD 176
+D K S+IYPLPH YVVKDLVPD
Sbjct: 110 VDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETKKESRIYPLPHTYVVKDLVPD 169
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
M FY QY+SI+P+LQRD + QS +R+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 170 MTQFYKQYRSIKPYLQRDTPPPDGKENRQSKAERRKLDGLYECILCACCSTSCPSYWWNS 229
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
E+YLGPAVLMQ+YRWI DSRDEKT R + L + S+YRCHTI+NC+RTCPKGLNP AI
Sbjct: 230 EEYLGPAVLMQSYRWIADSRDEKTEQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAI 289
Query: 297 AEIKKLLS 304
AEIKK ++
Sbjct: 290 AEIKKAMA 297
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K S+IYPL
Sbjct: 98 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTETKKESRIYPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QY+SI+ +L
Sbjct: 158 PHTYVVKDLVPDMTQFYKQYRSIKPYL 184
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I K S+IYPLPH YVVKDLVPDM FY QY+SI+P+L R
Sbjct: 134 GVNTLACLCRIPTETKKESRIYPLPHTYVVKDLVPDMTQFYKQYRSIKPYLQR 186
>gi|196006904|ref|XP_002113318.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583722|gb|EDV23792.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 273
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/239 (55%), Positives = 157/239 (65%), Gaps = 51/239 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
+ KP + K F+IYRW+PD + +P MQEY VDL+ N+ID
Sbjct: 32 SRKPERMKKFSIYRWSPDD-NTRPKMQEYNVDLSTCGPMVLDGLIKIKNEIDPTLTFRRS 90
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
K KIYPLPHMYVVKDLV DMNNFY QY+
Sbjct: 91 CREGICGSCSMNIGGINTLACLSKIDPDLSKPVKIYPLPHMYVVKDLVVDMNNFYDQYRG 150
Query: 187 IQPWLQRDKEN-IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
I+P+L+R K+ IG Q QS++DRKKLDGLYECILCACCSTSCPSYWW+ +KYLGPAVL
Sbjct: 151 IEPYLKRKKDTTIGQEQLHQSVEDRKKLDGLYECILCACCSTSCPSYWWHPDKYLGPAVL 210
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
MQAYRW+IDSRDE T +RL +L + FSVY+CHTIMNCT+TCPKGLNPG AI EIKK L+
Sbjct: 211 MQAYRWMIDSRDEFTQERLEKLDNAFSVYKCHTIMNCTKTCPKGLNPGLAIGEIKKKLA 269
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 18/165 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD LIKIKNE+DPTLTFRRSCREGICGSC+MNIGG+NTLAC+SKID + K KIYPL
Sbjct: 69 MVLDGLIKIKNEIDPTLTFRRSCREGICGSCSMNIGGINTLACLSKIDPDLSKPVKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG-------GPWKILGTLTAK----NIRSFQLSA 108
PHMYVVKDLV DMNNFY QY+ I+ +L G ++ ++ + + L A
Sbjct: 129 PHMYVVKDLVVDMNNFYDQYRGIEPYLKRKKDTTIGQEQLHQSVEDRKKLDGLYECILCA 188
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
S++ P+ P KY A+ YRW D DE + K+D
Sbjct: 189 CCSTSCPSYWWHPDKYLGPAVLMQAYRWMIDSRDEFTQERLEKLD 233
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L KID + K KIYPLPHMYVVKDLV DMNNFY QY+ I+P+L R
Sbjct: 105 GINTLACLSKIDPDLSKPVKIYPLPHMYVVKDLVVDMNNFYDQYRGIEPYLKR 157
>gi|449295138|gb|EMC91160.1| hypothetical protein BAUCODRAFT_134827 [Baudoinia compniacensis
UAMH 10762]
Length = 300
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 166/282 (58%), Gaps = 53/282 (18%)
Query: 76 YAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAV---PAEKP-AKYKTFAIYRWN 131
YA +S+ +G + LG ++ S + + P+ P +K KTF IYRWN
Sbjct: 17 YAFSRSMATTVGNTKEPLGAISEATSSSSPPLSPKHTTTIKEPSPDPESKIKTFHIYRWN 76
Query: 132 PDKPDEKPTMQEYKVDLN--------------NKIDAN---------------------- 155
PD+P KP MQ Y +DLN N++D
Sbjct: 77 PDEPSSKPKMQSYTLDLNKTGPMILDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGV 136
Query: 156 -------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQ 202
K ++IYPLPH YVVKDLVPD+ FY QYKSI+P+LQRD +
Sbjct: 137 NTLACLCRIPTDAGKETRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQRDTPPPDGRE 196
Query: 203 YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTAD 262
Y QS DR+KLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YRWI DSRDEKT
Sbjct: 197 YRQSKSDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYRWIADSRDEKTEQ 256
Query: 263 RLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
R + L + ++YRCHTI+NC+RTCPKGLNP AIAEIKK L+
Sbjct: 257 RKDALNNSMALYRCHTILNCSRTCPKGLNPALAIAEIKKSLA 298
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 103/169 (60%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 99 MILDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDAGKETRIYPL 158
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL--------GGPWKILGTLTAK--NIRSFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L G ++ + K + L A
Sbjct: 159 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRDTPPPDGREYRQSKSDRRKLDGLYECILCAC 218
Query: 110 ASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ E YRW D DEK ++ K LNN +
Sbjct: 219 CSTSCPSYWWNSEEYLGPAVLLQSYRWIADSRDEK--TEQRKDALNNSM 265
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K ++IYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 135 GVNTLACLCRIPTDAGKETRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 187
>gi|346979548|gb|EGY23000.1| succinate dehydrogenase iron-sulfur subunit [Verticillium dahliae
VdLs.17]
Length = 274
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 158/264 (59%), Gaps = 50/264 (18%)
Query: 91 KILGTLTAKNIR-SFQLSAAASSAVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
++LG+ R + A+ PA P K K+F IYRWNPD+P EKP MQ Y +DL
Sbjct: 10 RVLGSALRPAFRPALFARTMATVTEPATTPEPKMKSFQIYRWNPDQPTEKPRMQTYTLDL 69
Query: 149 N--------------NKID----------------------------------ANDKVSK 160
N N+ID K
Sbjct: 70 NKTGPMVLDALVRIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTETSEMK 129
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH YVVKDLVPD+ FY QYKSI+P+LQRD + +Y Q+ DR+KLDGLYECI
Sbjct: 130 IYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQRDTPSPDGKEYRQTKADRRKLDGLYECI 189
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+ +R L + S+YRCHTI+
Sbjct: 190 LCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERKGERKMALDNSMSLYRCHTIL 249
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCTR CPKGLNPG AIAEIKK +S
Sbjct: 250 NCTRACPKGLNPGLAIAEIKKQMS 273
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 99/169 (58%), Gaps = 18/169 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I KIYPLP
Sbjct: 75 MVLDALVRIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTETSEMKIYPLP 134
Query: 61 HMYVVKDLVPDMNNFYAQYKSI----QRHLGGPWKILGTLTAKNIRSFQ------LSAAA 110
H YVVKDLVPD+ FY QYKSI QR P T + R L A
Sbjct: 135 HTYVVKDLVPDLTQFYKQYKSIKPYLQRDTPSPDGKEYRQTKADRRKLDGLYECILCACC 194
Query: 111 SSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKID 153
S++ P+ +Y AI YRW D DE+ E K+ L+N +
Sbjct: 195 STSCPSYWWNSEEYLGPAILLQSYRWLADSRDER--KGERKMALDNSMS 241
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I KIYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 116 ACLCRIPTETSEMKIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 162
>gi|50427539|ref|XP_462382.1| DEHA2G19382p [Debaryomyces hansenii CBS767]
gi|49658052|emb|CAG90889.1| DEHA2G19382p [Debaryomyces hansenii CBS767]
Length = 263
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 152/241 (63%), Gaps = 49/241 (20%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN--- 155
A A + K F IYRWNPD P+ +P M Y+VDLN N+ DA
Sbjct: 21 ATSANAETRMKKFQIYRWNPDTPEVEPKMNTYEVDLNQCGPMVLDAIIKIKNEQDATLTF 80
Query: 156 --------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQ 183
K KIYPLPHM+VV+DLVPD+ +FY Q
Sbjct: 81 RRSCREGICGSCAMNIGGRNTLACLCRIEEDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQ 140
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
YKSIQP+LQRD + LQS++DR KLDGLYECILCACCST+CPSYWWN ++YLGPA
Sbjct: 141 YKSIQPYLQRDTHPEDGRENLQSIEDRAKLDGLYECILCACCSTACPSYWWNQQQYLGPA 200
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
VLMQAYRW+IDSRD+ + R L++ S+YRCHTIMNC+RTCPKGLNPG+AIAEIKK L
Sbjct: 201 VLMQAYRWLIDSRDQASRARKEMLQNSMSLYRCHTIMNCSRTCPKGLNPGKAIAEIKKQL 260
Query: 304 S 304
+
Sbjct: 261 A 261
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDA+IKIKNE D TLTFRRSCREGICGSCAMNIGG NTLAC+ +I+ + K KIYPL
Sbjct: 62 MVLDAIIKIKNEQDATLTFRRSCREGICGSCAMNIGGRNTLACLCRIEEDTSKDLKIYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSIQ +L
Sbjct: 122 PHMFVVRDLVPDLTHFYKQYKSIQPYL 148
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I+ + K KIYPLPHM+VV+DLVPD+ +FY QYKSIQP+L R
Sbjct: 103 ACLCRIEEDTSKDLKIYPLPHMFVVRDLVPDLTHFYKQYKSIQPYLQR 150
>gi|336273880|ref|XP_003351694.1| hypothetical protein SMAC_00236 [Sordaria macrospora k-hell]
gi|380095973|emb|CCC06020.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 282
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 156/258 (60%), Gaps = 49/258 (18%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
+ A+ + + A S+ + K KTF IYRWNPD P EKP MQ Y +DLN
Sbjct: 24 VAARGMANLADGATHSNHASDGQSPKLKTFQIYRWNPDTPTEKPRMQSYTLDLNKTGPMV 83
Query: 150 --------NKIDA-----------------------------------NDKVSKIYPLPH 166
N++D N KIYPLPH
Sbjct: 84 LDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPH 143
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
YVVKDLVPD+ FY QYKSI+P+LQRD + +Y Q+ DRKKLDGLYECILCACCS
Sbjct: 144 TYVVKDLVPDLTLFYKQYKSIKPYLQRDTPSPDGKEYRQTKADRKKLDGLYECILCACCS 203
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+ A R + L + S+YRCHTI+NCTRTC
Sbjct: 204 TSCPSYWWNSEEYLGPAILLQSYRWLADSRDERHAQRKDALNNSMSLYRCHTILNCTRTC 263
Query: 287 PKGLNPGRAIAEIKKLLS 304
PKGLNPG AIA IKK L+
Sbjct: 264 PKGLNPGLAIANIKKELA 281
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I A++ KIYPL
Sbjct: 82 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPADNSAEMKIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 142 PHTYVVKDLVPDLTLFYKQYKSIKPYL 168
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 26/123 (21%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ+Y ++ D L ++K DP +R R+C +G+
Sbjct: 69 MQSYTLDLNKTGPMVLDALVRIKNELDPTLTFR--------RSCREGI------------ 108
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 360
G + G +T A L +I A++ KIYPLPH YVVKDLVPD+ FY QYKSI+P+
Sbjct: 109 -CGSCAMNINGTNTLACLCRIPADNSAEMKIYPLPHTYVVKDLVPDLTLFYKQYKSIKPY 167
Query: 361 LPR 363
L R
Sbjct: 168 LQR 170
>gi|392586077|gb|EIW75414.1| iron-sulphar subunit protein of succinate dehydrogenase [Coniophora
puteana RWD-64-598 SS2]
Length = 274
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 155/253 (61%), Gaps = 50/253 (19%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
R+F SAA + A P EKP K F IYRWNPD+P +KP +Q Y +DLN
Sbjct: 22 RTFASSAARAQAEPLEKPVLNKEFKIYRWNPDEPAKKPELQSYTIDLNQTGPMVLDALIK 81
Query: 151 -------------------------------------KIDAN-DKVSKIYPLPHMYVVKD 172
+ID N K SKIYPLPHMY+VKD
Sbjct: 82 IKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNAGKDSKIYPLPHMYIVKD 141
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ FY QYKSI+P+LQ D ++LQS ++R+KLDGLYECILCACCSTSCPSY
Sbjct: 142 LVPDLTLFYKQYKSIKPYLQNDNPP-EQGEFLQSREERQKLDGLYECILCACCSTSCPSY 200
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN ++YLGPA LMQAYRWI DSRD A R QL++ S+YRCHTI NC RTCPKGLNP
Sbjct: 201 WWNQDEYLGPATLMQAYRWIADSRDSYGAQRKEQLQNEMSLYRCHTIFNCARTCPKGLNP 260
Query: 293 GRAIAEIKKLLSG 305
AIA+IK L+
Sbjct: 261 AAAIAKIKLELAA 273
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N K SKIYPL
Sbjct: 74 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNAGKDSKIYPL 133
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSI+ +L
Sbjct: 134 PHMYIVKDLVPDLTLFYKQYKSIKPYL 160
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID N K SKIYPLPHMY+VKDLVPD+ FY QYKSI+P+L
Sbjct: 115 ACLCRIDRNAGKDSKIYPLPHMYIVKDLVPDLTLFYKQYKSIKPYL 160
>gi|453081970|gb|EMF10018.1| succinate dehydrogenase iron-sulfur protein,mitochondrial precursor
[Mycosphaerella populorum SO2202]
Length = 300
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 151/238 (63%), Gaps = 49/238 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
A+ AK KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 61 ADPNAKIKTFQIYRWNPDEPQTKPKMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRS 120
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
K S+IYPLPH YVVKDLVPD+ FY QYKS
Sbjct: 121 CREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVPDLTQFYKQYKS 180
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+P+LQRD + QS +DR+KLDG+YECILCACCSTSCPSYWWN E+YLGPAVLM
Sbjct: 181 IKPYLQRDSLPEDGKEVRQSKEDRRKLDGMYECILCACCSTSCPSYWWNSEEYLGPAVLM 240
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
Q+YRWI DSRD+K A+R + L + S+YRCHTI+NC+RTCPKGLNP AIA+IKK ++
Sbjct: 241 QSYRWIADSRDQKAAERKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAQIKKEMA 298
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 99 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKESRIYPL 158
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ FY QYKSI+ +L
Sbjct: 159 PHTYVVKDLVPDLTQFYKQYKSIKPYL 185
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 29/138 (21%)
Query: 232 YWWN-GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCP 287
Y WN E P MQ+Y ++ D L ++K DP +R R+C
Sbjct: 73 YRWNPDEPQTKPK--MQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR--------RSCR 122
Query: 288 KGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVP 345
+G+ G + G++T A L +I + K S+IYPLPH YVVKDLVP
Sbjct: 123 EGI-------------CGSCAMNIDGVNTLACLCRIPTDTAKESRIYPLPHTYVVKDLVP 169
Query: 346 DMNNFYAQYKSIQPWLPR 363
D+ FY QYKSI+P+L R
Sbjct: 170 DLTQFYKQYKSIKPYLQR 187
>gi|324517746|gb|ADY46909.1| Succinate dehydrogenase ubiquinone iron-sulfur subunit [Ascaris
suum]
Length = 291
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 166/268 (61%), Gaps = 53/268 (19%)
Query: 97 TAKNIRSFQLSA--AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----- 149
T +++R F + A+ A PA K KTF IYR+NP++P KP MQ+Y VDLN
Sbjct: 18 TIRSLRLFDRTCRCGATMAAPA-KMKHMKTFEIYRFNPEQPGSKPRMQKYDVDLNKCGNM 76
Query: 150 ---------NKIDAN-----------------------------------DKVSKIYPLP 165
N ID K KIYPLP
Sbjct: 77 VLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPLP 136
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCAC 224
HM+V++DLV DMN FYAQY IQPWLQ+ K ++G Q QS+ +++K+DGLYECILCAC
Sbjct: 137 HMFVIRDLVVDMNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCAC 196
Query: 225 CSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTR 284
CSTSCPSYWWN +KYLGPAVLMQAYRWIIDSRD+ +RL++++D FS ++CHTIMNCT+
Sbjct: 197 CSTSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTK 256
Query: 285 TCPKGLNPGRAIAEIKKLLSGLVKKDKP 312
TCPK LNP +AI EIK LL+ + K P
Sbjct: 257 TCPKHLNPAKAIGEIKMLLTKIRTKPAP 284
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKN++DPTLTFRRSCREGICGSCAMNIGG NTLACI +I+ N K KIYPL
Sbjct: 76 MVLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPL 135
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+V++DLV DMN FYAQY IQ PW
Sbjct: 136 PHMFVIRDLVVDMNLFYAQYAYIQ-----PW 161
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + +I+ N K KIYPLPHM+V++DLV DMN FYAQY IQPWL +
Sbjct: 117 ACICEIEENKGKSVKIYPLPHMFVIRDLVVDMNLFYAQYAYIQPWLQK 164
>gi|452837341|gb|EME39283.1| hypothetical protein DOTSEDRAFT_66315 [Dothistroma septosporum
NZE10]
Length = 296
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/234 (53%), Positives = 149/234 (63%), Gaps = 49/234 (20%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
++ KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 61 SRIKTFQIYRWNPDEPASKPKMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREG 120
Query: 151 -------------------KIDANDKV-SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
+I + KV S+IYPLPH YVVKDLVPD+ FY QYKSI+P+
Sbjct: 121 ICGSCAMNIDGVNTLACLCRIPTDPKVESRIYPLPHTYVVKDLVPDLTQFYKQYKSIKPY 180
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQRD + LQS +DR+KLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YR
Sbjct: 181 LQRDTAPADGKENLQSKEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYR 240
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
WI DSRDEKT R + L + S+YRCHTI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 241 WIADSRDEKTLQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKKSMA 294
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 104/169 (61%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKV-SKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + KV S+IYPL
Sbjct: 95 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDPKVESRIYPL 154
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL---GGPWKILGTLTAKNIR-------SFQLSAA 109
PH YVVKDLVPD+ FY QYKSI+ +L P L +K R L A
Sbjct: 155 PHTYVVKDLVPDLTQFYKQYKSIKPYLQRDTAPADGKENLQSKEDRRKLDGLYECILCAC 214
Query: 110 ASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ E YRW D DEK T+Q K LNN +
Sbjct: 215 CSTSCPSYWWNSEEYLGPAVLLQSYRWIADSRDEK-TLQR-KDALNNSM 261
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 31/139 (22%)
Query: 232 YWWNGEKYLGPAVL--MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN ++ PA MQ+Y ++ D L ++K DP +R R+C
Sbjct: 69 YRWNPDE---PASKPKMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR--------RSC 117
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKV-SKIYPLPHMYVVKDLV 344
+G+ G + G++T A L +I + KV S+IYPLPH YVVKDLV
Sbjct: 118 REGI-------------CGSCAMNIDGVNTLACLCRIPTDPKVESRIYPLPHTYVVKDLV 164
Query: 345 PDMNNFYAQYKSIQPWLPR 363
PD+ FY QYKSI+P+L R
Sbjct: 165 PDLTQFYKQYKSIKPYLQR 183
>gi|158452927|gb|ABW39789.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
gi|158452929|gb|ABW39790.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
gi|158452931|gb|ABW39791.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
gi|158452933|gb|ABW39792.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
Length = 306
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 151/236 (63%), Gaps = 49/236 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
K AK KTF IYRWNPD+P KP M+ Y +DLN N++D
Sbjct: 69 KDAKTKTFHIYRWNPDEPTSKPKMRSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCR 128
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K S+IYPLPHMYVVKDLVPDM FY QY+S++
Sbjct: 129 EGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVK 188
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+
Sbjct: 189 PYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQS 248
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRDEK A+R + L + S+YRC+TI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 YRWIADSRDEKKAERQDALNNSMSLYRCYTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 103/175 (58%), Gaps = 31/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PHMYVVKDLVPDM FY QY+S++ +L T A + R F+
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYLQ------RTTAAPDGREFRQSKEDRKKLDGLYE 218
Query: 106 --LSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ E YRW D DEK E + LNN +
Sbjct: 219 CILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEK--KAERQDALNNSM 271
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 141 GVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 194
>gi|89573845|gb|ABD77148.1| succinate dehydrogenase complex subunit B [Bos taurus]
Length = 231
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 148/213 (69%), Gaps = 50/213 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN----------------------------------- 149
FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 19 FAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSC 78
Query: 150 -------------NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-D 194
+ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D
Sbjct: 79 AMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKD 138
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+ID
Sbjct: 139 ESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMID 198
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SRD+ T +RL +L+DPFS+YRCHTIMNCTRTCP
Sbjct: 199 SRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCP 231
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 109/170 (64%), Gaps = 24/170 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 48 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 107
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPD++NFYAQYKSI+ +L GG + L ++ + + L A
Sbjct: 108 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIEDREKLDGLYECILCA 167
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
S++ P+ Y WN DK MQ Y+ ++++ D ++
Sbjct: 168 CCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 206
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 85 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 136
>gi|164656867|ref|XP_001729560.1| hypothetical protein MGL_3104 [Malassezia globosa CBS 7966]
gi|159103453|gb|EDP42346.1| hypothetical protein MGL_3104 [Malassezia globosa CBS 7966]
Length = 288
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 160/260 (61%), Gaps = 55/260 (21%)
Query: 91 KILGTLTAKNIRSFQLSAAASSAVPA-EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
++LG T F S +++ A PA E+P+K K F IYRW+P+ P +KP M+ Y +DLN
Sbjct: 18 RMLGAAT------FSTSISSAMASPAAERPSKMKAFKIYRWDPENPAQKPHMKTYNIDLN 71
Query: 150 N------------------------------------------------KIDANDKVSKI 161
+ID + S I
Sbjct: 72 QTGPMVLDALLKIKNEQDSTLAFRRSCREGICGSCAMNIDGVNTLACLCRIDRDASQSNI 131
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECIL 221
YPLPH +VVKDL+PD+ FY QY+SI+P+L+ G +YLQS ++R+ LDGLYECIL
Sbjct: 132 YPLPHTHVVKDLIPDLTQFYKQYRSIEPYLKPAGPPPGGREYLQSPEERRHLDGLYECIL 191
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACC+T+CPSYWWNG+ YLGPAVLMQAYRW+ DSRD A+R +L++ FS+YRCHTI N
Sbjct: 192 CACCATACPSYWWNGDAYLGPAVLMQAYRWMADSRDAHGAERRERLENTFSLYRCHTIFN 251
Query: 282 CTRTCPKGLNPGRAIAEIKK 301
CTRTCPKGLNP RAIA+IKK
Sbjct: 252 CTRTCPKGLNPARAIAQIKK 271
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE D TL FRRSCREGICGSCAMNI GVNTLAC+ +ID + S IYPLP
Sbjct: 76 MVLDALLKIKNEQDSTLAFRRSCREGICGSCAMNIDGVNTLACLCRIDRDASQSNIYPLP 135
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL--GGP 89
H +VVKDL+PD+ FY QY+SI+ +L GP
Sbjct: 136 HTHVVKDLIPDLTQFYKQYRSIEPYLKPAGP 166
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID + S IYPLPH +VVKDL+PD+ FY QY+SI+P+L
Sbjct: 112 GVNTLACLCRIDRDASQSNIYPLPHTHVVKDLIPDLTQFYKQYRSIEPYL 161
>gi|389642651|ref|XP_003718958.1| hypothetical protein MGG_00167 [Magnaporthe oryzae 70-15]
gi|58257381|gb|AAW69312.1| succinate dehydrogenase ubiquinone iron-sulfur protein-like protein
[Magnaporthe grisea]
gi|351641511|gb|EHA49374.1| hypothetical protein MGG_00167 [Magnaporthe oryzae 70-15]
Length = 274
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 160/254 (62%), Gaps = 51/254 (20%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+R + + S A E +K KTF IYRW+P +P EKP MQ Y +DLN
Sbjct: 20 LRKPAMVSVRSMASVGESESKMKTFQIYRWDPSQPSEKPRMQTYTLDLNKTGPMVLDALV 79
Query: 150 ---NKID------------------------------------ANDKVSKIYPLPHMYVV 170
N++D A+ +V KIYPLPH YVV
Sbjct: 80 RIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTEASSEV-KIYPLPHTYVV 138
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
KDLVPD+ +FY QY+SI+P+LQRD+ +Y QS +DR+KLDGLYECILCACCSTSCP
Sbjct: 139 KDLVPDLTHFYKQYRSIKPYLQRDEPAPDGKEYRQSKEDRRKLDGLYECILCACCSTSCP 198
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN E+YLGPA+L+Q+YRW+ DSRD++ +R L + S+YRCHTI+NCTRTCPKGL
Sbjct: 199 SYWWNSEEYLGPAILLQSYRWLADSRDQRKVERRLALDNSMSLYRCHTILNCTRTCPKGL 258
Query: 291 NPGRAIAEIKKLLS 304
NP +AIAEIKK ++
Sbjct: 259 NPAKAIAEIKKEMA 272
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 77/88 (87%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI--DANDKVSKIYP 58
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I +A+ +V KIYP
Sbjct: 73 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTEASSEV-KIYP 131
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LPH YVVKDLVPD+ +FY QY+SI+ +L
Sbjct: 132 LPHTYVVKDLVPDLTHFYKQYRSIKPYL 159
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+A+ +V KIYPLPH YVVKDLVPD+ +FY QY+SI+P+L R
Sbjct: 122 EASSEV-KIYPLPHTYVVKDLVPDLTHFYKQYRSIKPYLQR 161
>gi|302414914|ref|XP_003005289.1| succinate dehydrogenase iron-sulfur subunit [Verticillium
albo-atrum VaMs.102]
gi|261356358|gb|EEY18786.1| succinate dehydrogenase iron-sulfur subunit [Verticillium
albo-atrum VaMs.102]
Length = 274
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 158/264 (59%), Gaps = 50/264 (18%)
Query: 91 KILGTLTAKNIR-SFQLSAAASSAVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
++LG+ R + A+ PA P K K+F IYRWNPD+P EKP MQ Y +DL
Sbjct: 10 RVLGSAVRPAFRPALFARTMATVNEPATTPEPKMKSFQIYRWNPDQPTEKPRMQTYTLDL 69
Query: 149 N--------------NKID----------------------------------ANDKVSK 160
N N+ID K
Sbjct: 70 NKTGPMVLDALVRIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTETPEMK 129
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH YVVKDLVPD+ FY QYKSI+P+LQRD + +Y Q+ DR+KLDGLYECI
Sbjct: 130 IYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQRDTPSPDGKEYRQTKADRRKLDGLYECI 189
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRDE+ +R L + S+YRCHTI+
Sbjct: 190 LCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDERKGERKMALDNSMSLYRCHTIL 249
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCTR CPKGLNPG AIAEIKK +S
Sbjct: 250 NCTRACPKGLNPGLAIAEIKKQMS 273
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 99/169 (58%), Gaps = 18/169 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I KIYPLP
Sbjct: 75 MVLDALVRIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPTETPEMKIYPLP 134
Query: 61 HMYVVKDLVPDMNNFYAQYKSI----QRHLGGPWKILGTLTAKNIRSFQ------LSAAA 110
H YVVKDLVPD+ FY QYKSI QR P T + R L A
Sbjct: 135 HTYVVKDLVPDLTQFYKQYKSIKPYLQRDTPSPDGKEYRQTKADRRKLDGLYECILCACC 194
Query: 111 SSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKID 153
S++ P+ +Y AI YRW D DE+ E K+ L+N +
Sbjct: 195 STSCPSYWWNSEEYLGPAILLQSYRWLADSRDER--KGERKMALDNSMS 241
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I KIYPLPH YVVKDLVPD+ FY QYKSI+P+L R
Sbjct: 116 ACLCRIPTETPEMKIYPLPHTYVVKDLVPDLTQFYKQYKSIKPYLQR 162
>gi|440476208|gb|ELQ44829.1| succinate dehydrogenase iron-sulfur subunit [Magnaporthe oryzae
Y34]
gi|440491101|gb|ELQ70567.1| succinate dehydrogenase iron-sulfur subunit [Magnaporthe oryzae
P131]
Length = 301
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 160/254 (62%), Gaps = 51/254 (20%)
Query: 101 IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----------- 149
+R + + S A E +K KTF IYRW+P +P EKP MQ Y +DLN
Sbjct: 20 LRKPAMVSVRSMASVGESESKMKTFQIYRWDPSQPSEKPRMQTYTLDLNKTGPMVLDALV 79
Query: 150 ---NKID------------------------------------ANDKVSKIYPLPHMYVV 170
N++D A+ +V KIYPLPH YVV
Sbjct: 80 RIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTEASSEV-KIYPLPHTYVV 138
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
KDLVPD+ +FY QY+SI+P+LQRD+ +Y QS +DR+KLDGLYECILCACCSTSCP
Sbjct: 139 KDLVPDLTHFYKQYRSIKPYLQRDEPAPDGKEYRQSKEDRRKLDGLYECILCACCSTSCP 198
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN E+YLGPA+L+Q+YRW+ DSRD++ +R L + S+YRCHTI+NCTRTCPKGL
Sbjct: 199 SYWWNSEEYLGPAILLQSYRWLADSRDQRKVERRLALDNSMSLYRCHTILNCTRTCPKGL 258
Query: 291 NPGRAIAEIKKLLS 304
NP +AIAEIKK ++
Sbjct: 259 NPAKAIAEIKKEMA 272
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 77/88 (87%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI--DANDKVSKIYP 58
MVLDAL++IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I +A+ +V KIYP
Sbjct: 73 MVLDALVRIKNELDPTLTFRRSCREGICGSCAMNINGTNTLACLCRIPTEASSEV-KIYP 131
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LPH YVVKDLVPD+ +FY QY+SI+ +L
Sbjct: 132 LPHTYVVKDLVPDLTHFYKQYRSIKPYL 159
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+A+ +V KIYPLPH YVVKDLVPD+ +FY QY+SI+P+L R
Sbjct: 122 EASSEV-KIYPLPHTYVVKDLVPDLTHFYKQYRSIKPYLQR 161
>gi|158452935|gb|ABW39793.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
gi|158452937|gb|ABW39794.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Alternaria alternata]
Length = 306
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 150/236 (63%), Gaps = 49/236 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
K AK KTF IYRWNPD+P KP M+ Y +DLN N++D
Sbjct: 69 KDAKTKTFHIYRWNPDEPTSKPKMRSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCR 128
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K S+IYPLPHMYVVKDLVPDM FY QY+S++
Sbjct: 129 EGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVK 188
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQR ++ QS +DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+
Sbjct: 189 PYLQRTTAAPDGREFRQSKEDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQS 248
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRDEK A+R + L + S+YRC TI+NC+RTCPKGLNP AIAEIKK ++
Sbjct: 249 YRWIADSRDEKKAERQDALNNSMSLYRCRTILNCSRTCPKGLNPALAIAEIKKSMA 304
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 103/175 (58%), Gaps = 31/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 105 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 164
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PHMYVVKDLVPDM FY QY+S++ +L T A + R F+
Sbjct: 165 PHMYVVKDLVPDMTLFYKQYRSVKPYLQ------RTTAAPDGREFRQSKEDRKKLDGLYE 218
Query: 106 --LSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ E YRW D DEK E + LNN +
Sbjct: 219 CILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEK--KAERQDALNNSM 271
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 141 GVNTLACLCRIPTDTTKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 194
>gi|353523894|gb|AER08707.1| mitochondrial succinate dehydrogenase subunit B [Zymoseptoria
tritici]
Length = 297
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/234 (54%), Positives = 149/234 (63%), Gaps = 49/234 (20%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
AK KTF IYRWNPD+P +KP MQ Y +DLN N++D
Sbjct: 61 AKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREG 120
Query: 156 -------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
K ++IYPLPH YVVKDLVPDM FY QYKSI+P+
Sbjct: 121 ICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPY 180
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQRD + QS+ DRKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVL+Q+YR
Sbjct: 181 LQRDTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYR 240
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
WI DSRDEKTA R + L + S+YRCHTI+NC+RT PKGLNP AIAEIKK ++
Sbjct: 241 WINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTRPKGLNPALAIAEIKKSMA 294
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K ++IYPL
Sbjct: 95 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPL 154
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPDM FY QYKSI+ +L
Sbjct: 155 PHTYVVKDLVPDMTQFYKQYKSIKPYL 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K ++IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 131 GVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 183
>gi|71004650|ref|XP_756991.1| succinate dehydrogenase [Ustilago maydis 521]
gi|416903|sp|P32420.1|DHSB_USTMA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|5231|emb|CAA77798.1| succinate dehydrogenase [Ustilago maydis]
gi|46096685|gb|EAK81918.1| DHSB_USTMA Succinate dehydrogenase [ubiquinone] iron-sulfur
protein, mitochondrial precursor (IP) [Ustilago maydis
521]
Length = 295
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 162/259 (62%), Gaps = 55/259 (21%)
Query: 97 TAKNIRSFQLSAAASSAVPAE-------KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
++ + +F +AAA A P KP K F IYRWNPDKP EKP +Q Y +DLN
Sbjct: 20 SSSRVAAFSTTAAARLATPTSDNVGSSGKPQHLKQFKIYRWNPDKPSEKPRLQSYTLDLN 79
Query: 150 --------------NKIDAN-------------------DKV--------------SKIY 162
N+ID D V +KIY
Sbjct: 80 QTGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKQNDTKIY 139
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILC 222
PLPHMY+VKDLVPD+ FY QY+SI+P+L+ + ++LQS ++R++LDGLYECILC
Sbjct: 140 PLPHMYIVKDLVPDLTQFYKQYRSIEPFLKSNN-TPSEGEHLQSPEERRRLDGLYECILC 198
Query: 223 ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNC 282
ACCSTSCPSYWWN ++YLGPAVLMQAYRW+ DSRD+ +R +L++ FS+YRCHTIMNC
Sbjct: 199 ACCSTSCPSYWWNQDEYLGPAVLMQAYRWMADSRDDFGEERRQKLENTFSLYRCHTIMNC 258
Query: 283 TRTCPKGLNPGRAIAEIKK 301
+RTCPK LNPG+AIA+IKK
Sbjct: 259 SRTCPKNLNPGKAIAQIKK 277
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +ID + +KIYPLP
Sbjct: 84 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKQND-TKIYPLP 142
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMY+VKDLVPD+ FY QY+SI+ L
Sbjct: 143 HMYIVKDLVPDLTQFYKQYRSIEPFL 168
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K +Q+Y ++ D L ++K DP +R R+C +
Sbjct: 58 YRWNPDK-PSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFR--------RSCRE 108
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A L +ID + +KIYPLPHMY+VKDLVPD+
Sbjct: 109 GI-------------CGSCAMNIDGVNTLACLCRIDKQND-TKIYPLPHMYIVKDLVPDL 154
Query: 348 NNFYAQYKSIQPWL 361
FY QY+SI+P+L
Sbjct: 155 TQFYKQYRSIEPFL 168
>gi|40645271|dbj|BAD06473.1| iron-sulphar subunit protein of succinate dehydrogenase [Lentinula
edodes]
Length = 272
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 154/255 (60%), Gaps = 50/255 (19%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------- 149
+ R+F S A P +KP K F IYRWNPD+P +KPT+Q Y +DLN
Sbjct: 18 DARTFTTSTRRLQAEPLQKPVLNKEFKIYRWNPDEPAKKPTLQSYTIDLNQTGPMILDAL 77
Query: 150 ----NKIDAN-----------------------------------DKVSKIYPLPHMYVV 170
N+ID K SKIYPLPHMY+V
Sbjct: 78 IKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDASKDSKIYPLPHMYIV 137
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
KDLVPD+ FY QYKSIQP+LQ D ++LQS ++R+KLDGLYECILCACCSTSCP
Sbjct: 138 KDLVPDLTQFYKQYKSIQPYLQNDNPP-EKGEFLQSQEERRKLDGLYECILCACCSTSCP 196
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN ++YLGPA LMQAYRWI DSRD A R L++ S+YRCHTI NC+RTCPKGL
Sbjct: 197 SYWWNQDEYLGPATLMQAYRWIADSRDSNGAKRKEYLQNELSMYRCHTIFNCSRTCPKGL 256
Query: 291 NPGRAIAEIKKLLSG 305
NP AIA+IK L+
Sbjct: 257 NPAAAIAKIKLELAA 271
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID + K SKIYPL
Sbjct: 72 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDASKDSKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSIQ +L
Sbjct: 132 PHMYIVKDLVPDLTQFYKQYKSIQPYL 158
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID + K SKIYPLPHMY+VKDLVPD+ FY QYKSIQP+L
Sbjct: 113 ACLCRIDRDASKDSKIYPLPHMYIVKDLVPDLTQFYKQYKSIQPYL 158
>gi|324516860|gb|ADY46654.1| Succinate dehydrogenase ubiquinone iron-sulfur subunit [Ascaris
suum]
Length = 281
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 168/268 (62%), Gaps = 53/268 (19%)
Query: 97 TAKNIRSFQLSA--AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL----NN 150
T +++R F + A+ A PA K KTF IYR+NP++P KP MQ+Y VDL N
Sbjct: 8 TIRSLRLFDRTCRCGATMAAPA-KMKHMKTFEIYRFNPEQPGSKPRMQKYDVDLSKCGNM 66
Query: 151 KIDA-----ND----------------------------------------KVSKIYPLP 165
+DA ND K KIYPLP
Sbjct: 67 VLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPLP 126
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCAC 224
HM+V++DLV DMN FYAQY IQPWLQ+ K ++G Q QS+ +++K+DGLYECILCAC
Sbjct: 127 HMFVIRDLVVDMNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCAC 186
Query: 225 CSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTR 284
CSTSCPSYWWN +KYLGPAVLMQAYRWIIDSRD+ +RL++++D FS ++CHTIMNCT+
Sbjct: 187 CSTSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTK 246
Query: 285 TCPKGLNPGRAIAEIKKLLSGLVKKDKP 312
TCPK LNP +AI EIK LL+ + K P
Sbjct: 247 TCPKHLNPAKAIGEIKMLLTKIKTKPAP 274
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKN++DPTLTFRRSCREGICGSCAMNIGG NTLACI +I+ N K KIYPL
Sbjct: 66 MVLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPL 125
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+V++DLV DMN FYAQY IQ PW
Sbjct: 126 PHMFVIRDLVVDMNLFYAQYAYIQ-----PW 151
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + +I+ N K KIYPLPHM+V++DLV DMN FYAQY IQPWL +
Sbjct: 107 ACICEIEENKGKSVKIYPLPHMFVIRDLVVDMNLFYAQYAYIQPWLQK 154
>gi|389806568|ref|ZP_10203615.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
thiooxydans LCS2]
gi|388445220|gb|EIM01300.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
thiooxydans LCS2]
Length = 260
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 159/238 (66%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------NNKID------- 153
PA+ K +TF +YRW+PD D+ P + Y+VDL N+ID
Sbjct: 19 PAKDAKKPRTFRVYRWSPDD-DQNPRIDTYEVDLAACGPMVLDALLKIKNEIDPTLTLRR 77
Query: 154 ------------------------ANDKVS----KIYPLPHMYVVKDLVPDMNNFYAQYK 185
A DK++ KIYPLPHM VVKDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACICAIDKMAAGDVKIYPLPHMPVVKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW+ R + + + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L
Sbjct: 138 SIKPWI-RTQSAVPDKERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QA RWI+DSRDE T +RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIKKL+
Sbjct: 197 LQAQRWIVDSRDEATGERLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLM 254
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 73/93 (78%), Gaps = 10/93 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID---ANDKVSKIY 57
MVLDAL+KIKNE+DPTLT RRSCREGICGSCAMNI G NTLACI ID A D KIY
Sbjct: 57 MVLDALLKIKNEIDPTLTLRRSCREGICGSCAMNIDGTNTLACICAIDKMAAGD--VKIY 114
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPHM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 115 PLPHMPVVKDLVPDLTHFYAQYASIK-----PW 142
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 2/44 (4%)
Query: 318 ALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A+ K+ A D KIYPLPHM VVKDLVPD+ +FYAQY SI+PW+
Sbjct: 102 AIDKMAAGD--VKIYPLPHMPVVKDLVPDLTHFYAQYASIKPWI 143
>gi|225678182|gb|EEH16466.1| succinate dehydrogenase iron-sulfur subunit [Paracoccidioides
brasiliensis Pb03]
Length = 296
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/267 (49%), Positives = 159/267 (59%), Gaps = 63/267 (23%)
Query: 100 NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA- 154
+ S +A + + ++ P K KTF IYRWNPDKP EKP MQ Y +DLN +DA
Sbjct: 29 TVESASKTAESPTHTTSQTP-KLKTFKIYRWNPDKPTEKPRMQNYALDLNKTGPMMLDAL 87
Query: 155 --------------------------------------------NDKVSKIYPLPHMYVV 170
K S+IYPLPH YVV
Sbjct: 88 IRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTSKESRIYPLPHTYVV 147
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRDKEN-------------IGNAQYLQSLDDRKKLDGLY 217
KDLVPDM FY QYKSI+P+LQRD + + + QS DRKKLDGLY
Sbjct: 148 KDLVPDMTYFYKQYKSIKPYLQRDTPSPDVHANGPALTHPLQGREIRQSPADRKKLDGLY 207
Query: 218 ECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCH 277
ECILCACCSTSCPSYWWN ++YLGPA+L+Q+YRW+ DSRDEKT +R L + SVYRCH
Sbjct: 208 ECILCACCSTSCPSYWWNSQEYLGPALLLQSYRWLADSRDEKTEERKAALDNSMSVYRCH 267
Query: 278 TIMNCTRTCPKGLNPGRAIAEIKKLLS 304
TI+NC+RTCPKGLNPG AIAEIKK+++
Sbjct: 268 TILNCSRTCPKGLNPGLAIAEIKKMMA 294
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 103/184 (55%), Gaps = 34/184 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALI+IKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 82 MMLDALIRIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTSKESRIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI----QR-------HLGGPWKILGTLTAKNIRSFQ--- 105
PH YVVKDLVPDM FY QYKSI QR H GP + L + IR
Sbjct: 142 PHTYVVKDLVPDMTYFYKQYKSIKPYLQRDTPSPDVHANGP-ALTHPLQGREIRQSPADR 200
Query: 106 ----------LSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
L A S++ P+ E YRW D DEK +E K L+
Sbjct: 201 KKLDGLYECILCACCSTSCPSYWWNSQEYLGPALLLQSYRWLADSRDEK--TEERKAALD 258
Query: 150 NKID 153
N +
Sbjct: 259 NSMS 262
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPDM FY QYKSI+P+L R
Sbjct: 118 GVNTLACLCRIPTDTSKESRIYPLPHTYVVKDLVPDMTYFYKQYKSIKPYLQR 170
>gi|2706555|emb|CAA75895.1| succinate dehydrogenase iron-sulfur subunit [Agaricus bisporus]
Length = 245
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 153/245 (62%), Gaps = 51/245 (20%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID- 153
A +A +KP K F IYRWNPD+P +KPT+Q YK+DLN N++D
Sbjct: 1 TARAAQAVQKPVLEKEFKIYRWNPDEPSKKPTLQSYKIDLNQCGPMILDALIKIKNEMDP 60
Query: 154 ----------------------------------ANDKVSKIYPLPHMYVVKDLVPDMNN 179
K +K+YPLPHMYVVKDLVPD+
Sbjct: 61 TLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREGSKDTKVYPLPHMYVVKDLVPDLTL 120
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FY QYKSIQPWLQ D N ++LQS++DRKKLDGLYECILCACCSTSCPSYWWN ++Y
Sbjct: 121 FYKQYKSIQPWLQND--NPPAHEHLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQDEY 178
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPA LMQAYRWI DSRD A R L++ S+YRCHTI NC+RTCPKGLNP AIA+I
Sbjct: 179 LGPATLMQAYRWIADSRDTHGAQRKEVLQNEMSLYRCHTIFNCSRTCPKGLNPAAAIAKI 238
Query: 300 KKLLS 304
K L+
Sbjct: 239 KLELA 243
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID K +K+YPL
Sbjct: 46 MILDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDREGSKDTKVYPL 105
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLVPD+ FY QYKSIQ PW
Sbjct: 106 PHMYVVKDLVPDLTLFYKQYKSIQ-----PW 131
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID K +K+YPLPHMYVVKDLVPD+ FY QYKSIQPWL
Sbjct: 87 ACLCRIDREGSKDTKVYPLPHMYVVKDLVPDLTLFYKQYKSIQPWL 132
>gi|268370126|ref|NP_001161244.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit-like
protein [Nasonia vitripennis]
Length = 330
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 157/245 (64%), Gaps = 51/245 (20%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------------------------- 149
K IYRWNP+KP KP +Q+++VDLN
Sbjct: 70 KIVKIYRWNPEKPTTKPYLQKFEVDLNKCGSMVLDILHYIKAELDPTLSFRRSCREGICG 129
Query: 150 ---------NKIDANDKVSK-------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
N + KV++ IYPLPH Y ++DL+PDM++F QYK I P+L+R
Sbjct: 130 SCSMNINGINTLACITKVTRDQEKSLLIYPLPHTYTIRDLIPDMSHFLEQYKKIDPYLKR 189
Query: 194 DKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+E+ +G Q +QS DR K+DGLYECILC CCS +CP YWW GEKYLGPAVLMQAYRW
Sbjct: 190 PQEHDFVGMRQLMQSERDRAKIDGLYECILCGCCSYACPPYWWAGEKYLGPAVLMQAYRW 249
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
IIDSRD+ +RL +L+D FSV+RCHTI NCT+TCPKGLNPGRAIAE+K+L++G+ K+K
Sbjct: 250 IIDSRDQTHEERLGKLRDFFSVFRCHTIFNCTKTCPKGLNPGRAIAELKRLVTGITDKEK 309
Query: 312 PGLDT 316
P ++T
Sbjct: 310 PDMET 314
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L IK E+DPTL+FRRSCREGICGSC+MNI G+NTLACI+K+ + +K IYPL
Sbjct: 101 MVLDILHYIKAELDPTLSFRRSCREGICGSCSMNINGINTLACITKVTRDQEKSLLIYPL 160
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
PH Y ++DL+PDM++F QYK I +L P
Sbjct: 161 PHTYTIRDLIPDMSHFLEQYKKIDPYLKRP 190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + K+ + +K IYPLPH Y ++DL+PDM++F QYK I P+L R
Sbjct: 137 GINTLACITKVTRDQEKSLLIYPLPHTYTIRDLIPDMSHFLEQYKKIDPYLKR 189
>gi|312088103|ref|XP_003145730.1| succinate dehydrogenase iron-sulfur protein [Loa loa]
gi|307759106|gb|EFO18340.1| succinate dehydrogenase iron-sulfur subunit [Loa loa]
Length = 279
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 166/258 (64%), Gaps = 52/258 (20%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------- 150
Q+ ASS P ++ KTF IYR++P+KP KP +Q+Y +DL++
Sbjct: 17 QVIRCASSTPPTG--SRVKTFEIYRYDPEKPGSKPQLQKYDIDLDDCGAMILDALIKIKN 74
Query: 151 ----------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVP 175
KI+ N K SKIYPLPHM+V+KDLVP
Sbjct: 75 EIDPTLTFRRSCREGICGSCAMNIDGENTLACTCKINENTSKSSKIYPLPHMFVIKDLVP 134
Query: 176 DMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
DM+ FYAQY SI+PWL++ +K +G Q Q+ +R+KLDGLYECILCACCSTSCPSYWW
Sbjct: 135 DMSLFYAQYASIEPWLKKKNKLVLGEKQMYQTEKEREKLDGLYECILCACCSTSCPSYWW 194
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N ++YLGPA+L+Q+YRWI+DSRD+ +RL+++ D FS ++CHTI+NCT+TCPK LNP +
Sbjct: 195 NADQYLGPAILLQSYRWIVDSRDDYAEERLSKIHDHFSAFKCHTILNCTKTCPKHLNPAK 254
Query: 295 AIAEIKKLLSGLVKKDKP 312
AI EIKKLL+G KK P
Sbjct: 255 AIGEIKKLLTGFDKKPAP 272
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC KI+ N K SKIYPL
Sbjct: 64 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGENTLACTCKINENTSKSSKIYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+V+KDLVPDM+ FYAQY SI+ PW
Sbjct: 124 PHMFVIKDLVPDMSLFYAQYASIE-----PW 149
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A KI+ N K SKIYPLPHM+V+KDLVPDM+ FYAQY SI+PWL +
Sbjct: 105 ACTCKINENTSKSSKIYPLPHMFVIKDLVPDMSLFYAQYASIEPWLKK 152
>gi|310942109|dbj|BAJ24098.1| succinate dehydrogenase iron-sulphur protein [Helicobasidium mompa]
Length = 291
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/270 (49%), Positives = 163/270 (60%), Gaps = 61/270 (22%)
Query: 96 LTAKNIRSFQLSAAASSAVPAE-----------KPAKYKTFAIYRWNPDKPDEKPTMQEY 144
+ A RS SA A A PAE KP KTF+IYRWNPD+P KP +Q+Y
Sbjct: 17 VMAPQARSIYSSAPALFATPAEEQATQDAGGASKPPAIKTFSIYRWNPDEPAVKPKLQKY 76
Query: 145 KVDLN--------------NKIDAN-------------------DKVS------------ 159
+D+N N++D D V+
Sbjct: 77 DIDMNKCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRIPKES 136
Query: 160 ----KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
KIYPLPHMYV+KDLVPDM FY QYKSI+P+L+ D N ++LQS +DRKKLDG
Sbjct: 137 GPDVKIYPLPHMYVIKDLVPDMTLFYKQYKSIEPYLKNDSVP-ENREFLQSQEDRKKLDG 195
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
+YECILCACCSTSCPSYWWN + YLGPAVLMQAYRWI DSRD +R +L++ FS+YR
Sbjct: 196 MYECILCACCSTSCPSYWWNQDTYLGPAVLMQAYRWIADSRDSYGEERKEKLQNTFSLYR 255
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
CHTI NCT+TCPKGLNP +AIA IK+ ++
Sbjct: 256 CHTIFNCTKTCPKGLNPAKAIAHIKREMAA 285
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I KIYPL
Sbjct: 86 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRIPKESGPDVKIYPL 145
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPDM FY QYKSI+ +L
Sbjct: 146 PHMYVIKDLVPDMTLFYKQYKSIEPYL 172
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHMYV+KDLVPDM FY QYKSI+P+L
Sbjct: 141 KIYPLPHMYVIKDLVPDMTLFYKQYKSIEPYL 172
>gi|443719411|gb|ELU09592.1| hypothetical protein CAPTEDRAFT_21987 [Capitella teleta]
Length = 214
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/166 (69%), Positives = 138/166 (83%), Gaps = 4/166 (2%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR---DKENIGNAQYLQS 206
KID N +K SKIYPLPHMYVVKDLVPDMNNFYAQYK I+P+L++ +E+ G Y QS
Sbjct: 46 KIDTNTNKTSKIYPLPHMYVVKDLVPDMNNFYAQYKHIEPYLKKKDVQEEDYGKVAYFQS 105
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
+DR KLDG+YECILCACCSTSCPSYWWN +KYLGPAV+MQAYRWI+DSRD+ ADRL++
Sbjct: 106 PEDRVKLDGMYECILCACCSTSCPSYWWNSDKYLGPAVIMQAYRWIMDSRDDFGADRLSK 165
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKP 312
+ D +S+Y+CHTIMNCT+TCPKGLNPG A+ E+KKLL G+ P
Sbjct: 166 MNDKWSLYKCHTIMNCTKTCPKGLNPGAAVGEMKKLLVGMTSSGIP 211
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC++KID N +K SKIYPL
Sbjct: 1 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGGNTLACLAKIDTNTNKTSKIYPL 60
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDMNNFYAQYK I+ +L
Sbjct: 61 PHMYVVKDLVPDMNNFYAQYKHIEPYL 87
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L KID N +K SKIYPLPHMYVVKDLVPDMNNFYAQYK I+P+L +
Sbjct: 38 GNTLACLAKIDTNTNKTSKIYPLPHMYVVKDLVPDMNNFYAQYKHIEPYLKK 89
>gi|321260805|ref|XP_003195122.1| succinate dehydrogenase iron-sulfur subunit [Cryptococcus gattii
WM276]
gi|317461595|gb|ADV23335.1| Succinate dehydrogenase iron-sulfur subunit, putative [Cryptococcus
gattii WM276]
Length = 280
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 157/253 (62%), Gaps = 51/253 (20%)
Query: 98 AKNIRSFQLSAAASSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
A RSF +A+A A P E K + K F IYRWNPD P+EKP +Q YKVDL+
Sbjct: 22 AAAARSFHATASAQLATPVEGKEPQIKEFKIYRWNPDVPNEKPKLQTYKVDLSQCGPMML 81
Query: 150 -------NKIDAN-----------------------------------DKVSKIYPLPHM 167
N++D K SKIYPLPHM
Sbjct: 82 DALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPKDTSKESKIYPLPHM 141
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
YVVKDLVPD+ FY QYKSI+P+L+ D ++LQS DRKKLDG+YECILCACCST
Sbjct: 142 YVVKDLVPDLTLFYKQYKSIEPYLKNDNPP-AKGEFLQSQADRKKLDGMYECILCACCST 200
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN ++YLGPAVLMQAYRW+ DSRD A+R ++++ S+YRCHTI NC+RTCP
Sbjct: 201 SCPSYWWNQDEYLGPAVLMQAYRWMADSRDSYGAERKEKMQNSMSLYRCHTIFNCSRTCP 260
Query: 288 KGLNPGRAIAEIK 300
KGLNP AIA++K
Sbjct: 261 KGLNPAAAIAKMK 273
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K SKIYPL
Sbjct: 79 MMLDALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPKDTSKESKIYPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ FY QYKSI+ +L
Sbjct: 139 PHMYVVKDLVPDLTLFYKQYKSIEPYL 165
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K SKIYPLPHMYVVKDLVPD+ FY QYKSI+P+L
Sbjct: 115 GVNTLACLCRIPKDTSKESKIYPLPHMYVVKDLVPDLTLFYKQYKSIEPYL 165
>gi|91206205|ref|YP_538560.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia bellii
RML369-C]
gi|157827816|ref|YP_001496880.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia bellii OSU
85-389]
gi|123388071|sp|Q1RGP3.1|DHSB_RICBR RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|91069749|gb|ABE05471.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia bellii
RML369-C]
gi|157803120|gb|ABV79843.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia bellii OSU
85-389]
Length = 261
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 157/233 (67%), Gaps = 49/233 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+ + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 25 SNLRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTVTFRRSCREG 83
Query: 156 ---------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+++S KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ D NA+ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QAYRW
Sbjct: 144 KTDSPAPSNAERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
I DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI+EIK L++
Sbjct: 204 IADSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAISEIKGLIA 256
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 93/158 (58%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D T+TFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTVTFRRSCREGICGSCAMNIDGTNTLACIKPIEEISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPAPSNAERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ KY AI YRW D D+
Sbjct: 173 LCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDD 210
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|348684182|gb|EGZ23997.1| hypothetical protein PHYSODRAFT_353902 [Phytophthora sojae]
Length = 271
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 149/239 (62%), Gaps = 49/239 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------------------- 149
A KP K F IYRW+P+ EKP Y VDL+
Sbjct: 33 AAKPKNIKYFKIYRWDPES-KEKPYQCTYPVDLDECGPMVLDALIKIKNEQDPTLTFRRS 91
Query: 150 ----------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
+ I N VS I+PLPHMYV++DLVPDMNNFY QY SI
Sbjct: 92 CREGICGSCAMNIDGGNTLACLSPIKKNKDVSSIHPLPHMYVIRDLVPDMNNFYDQYTSI 151
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWL DK N ++LQS++DRKKLDG+YECILCACCSTSCPSYWWN +KYLGPAVLMQ
Sbjct: 152 KPWLHSDKPRDVNHEHLQSIEDRKKLDGMYECILCACCSTSCPSYWWNPDKYLGPAVLMQ 211
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
A+RWI DSRD+KT +RL L D F +Y+CHTIMNCTRTCPKGLNP +AI +IK L+ L
Sbjct: 212 AFRWIEDSRDDKTEERLRALDDSFKLYKCHTIMNCTRTCPKGLNPAQAIGKIKTRLASL 270
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+S I N VS I+PLP
Sbjct: 70 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGGNTLACLSPIKKNKDVSSIHPLP 129
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HMYV++DLVPDMNNFY QY SI+ PW N Q
Sbjct: 130 HMYVIRDLVPDMNNFYDQYTSIK-----PWLHSDKPRDVNHEHLQSIEDRKKLDGMYECI 184
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WNPDK
Sbjct: 185 LCACCSTSCPS-----------YWWNPDK 202
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 36/49 (73%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A L I N VS I+PLPHMYV++DLVPDMNNFY QY SI+PWL
Sbjct: 107 GNTLACLSPIKKNKDVSSIHPLPHMYVIRDLVPDMNNFYDQYTSIKPWL 155
>gi|156057307|ref|XP_001594577.1| hypothetical protein SS1G_04384 [Sclerotinia sclerotiorum 1980]
gi|154702170|gb|EDO01909.1| hypothetical protein SS1G_04384 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 148/231 (64%), Gaps = 49/231 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
KTF IYRWNPD+P KP MQ Y +DLN N++D
Sbjct: 70 KTFHIYRWNPDEPASKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGICG 129
Query: 156 ------DKV----------------SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
D V +KIYPLPH YVVKD+VPD+ FY QYKSI+P+LQ
Sbjct: 130 SCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQH 189
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
G +YLQS ++RKKLDGLYECILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+
Sbjct: 190 TDPAPGGKEYLQSKEERKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLA 249
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
DSRD+K +R L + S+YRCHTI+NC+RTCPKGLNPG AIAEIKK ++
Sbjct: 250 DSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGLAIAEIKKEMA 300
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 105/169 (62%), Gaps = 19/169 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 101 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 160
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKNIRSFQ---LSAA 109
PH YVVKD+VPD+ FY QYKSI+ +L GG + K + L A
Sbjct: 161 PHTYVVKDIVPDLTQFYKQYKSIKPYLQHTDPAPGGKEYLQSKEERKKLDGLYECILCAC 220
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ +Y AI YRW D D+K +E K L+N +
Sbjct: 221 CSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQK--KEERKAALDNSM 267
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 31/137 (22%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN ++ PA MQ+Y ++ D L ++K DP +R R+C
Sbjct: 75 YRWNPDE---PASKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFR--------RSC 123
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLV 344
+G+ G + G++T A L +I + K +KIYPLPH YVVKD+V
Sbjct: 124 REGI-------------CGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 170
Query: 345 PDMNNFYAQYKSIQPWL 361
PD+ FY QYKSI+P+L
Sbjct: 171 PDLTQFYKQYKSIKPYL 187
>gi|405121683|gb|AFR96451.1| succinate dehydrogenase iron-sulfur subunit [Cryptococcus
neoformans var. grubii H99]
Length = 280
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 157/253 (62%), Gaps = 51/253 (20%)
Query: 98 AKNIRSFQLSAAASSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
A RSF +A+A A P E K + K F IYRWNPD P+EKP +Q YKVDL+
Sbjct: 22 AAAARSFHATASAQLATPVEGKQPQIKEFKIYRWNPDVPNEKPKLQTYKVDLSQCGPMML 81
Query: 150 -------NKIDAN-----------------------------------DKVSKIYPLPHM 167
N++D K SKIYPLPHM
Sbjct: 82 DALIKIKNELDPTLTFRRSCREGICGSCAMNIDGINTLACLCRIPKDTSKDSKIYPLPHM 141
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
YVVKDLVPD+ +FY QYKSI+P+L+ D ++LQS DRKKLDG+YECILCACCS
Sbjct: 142 YVVKDLVPDLTHFYKQYKSIEPYLKNDNPP-EKGEFLQSQADRKKLDGMYECILCACCSA 200
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN ++YLGPAVLMQAYRW+ DSRD A+R ++++ S+YRCHTI NCTRTCP
Sbjct: 201 SCPSYWWNQDQYLGPAVLMQAYRWMADSRDSYGAERKEKMQNAMSLYRCHTIFNCTRTCP 260
Query: 288 KGLNPGRAIAEIK 300
KGLNP AIA++K
Sbjct: 261 KGLNPAAAIAKMK 273
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLAC+ +I + K SKIYPL
Sbjct: 79 MMLDALIKIKNELDPTLTFRRSCREGICGSCAMNIDGINTLACLCRIPKDTSKDSKIYPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ +FY QYKSI+ +L
Sbjct: 139 PHMYVVKDLVPDLTHFYKQYKSIEPYL 165
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K SKIYPLPHMYVVKDLVPD+ +FY QYKSI+P+L
Sbjct: 115 GINTLACLCRIPKDTSKDSKIYPLPHMYVVKDLVPDLTHFYKQYKSIEPYL 165
>gi|379713102|ref|YP_005301440.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia massiliae
str. AZT80]
gi|376333748|gb|AFB30980.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia massiliae
str. AZT80]
Length = 261
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K K IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPKKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL LKDPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALKDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|219127560|ref|XP_002184001.1| succinate dehydrogenase iron sulfur protein [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217404724|gb|EEC44670.1| succinate dehydrogenase iron sulfur protein [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 273
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/254 (50%), Positives = 159/254 (62%), Gaps = 53/254 (20%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
RSF + ++A+P + P + K F +YRW+P++ +KP + Y VDL N
Sbjct: 20 RSFATADLKANAIPKQAP-RIKYFKVYRWDPEQ-SQKPYLSTYPVDLANCGPMVLDALIK 77
Query: 151 -------------------------------------KIDANDKVS--KIYPLPHMYVVK 171
ID D S KIYPLPHMYV+K
Sbjct: 78 IKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLSYIDQKDTSSATKIYPLPHMYVIK 137
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
DLVPDM NFY QY+SI+PWLQ +K + G A+YLQ+ +DR KLDG+YECILCACCST+CP
Sbjct: 138 DLVPDMGNFYEQYRSIEPWLQPEKGKEPGQAEYLQTREDRAKLDGMYECILCACCSTACP 197
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN +KYLGPAVL+QAYRWI DSRD T RL +L D F +YRCHTIMNCT+ CPK L
Sbjct: 198 SYWWNADKYLGPAVLLQAYRWIEDSRDGSTKKRLEELDDAFKLYRCHTIMNCTKVCPKHL 257
Query: 291 NPGRAIAEIKKLLS 304
NPG+AIA+IKK L+
Sbjct: 258 NPGKAIAQIKKRLA 271
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 76/92 (82%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS--KIYP 58
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI GVNTLAC+S ID D S KIYP
Sbjct: 70 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLSYIDQKDTSSATKIYP 129
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHMYV+KDLVPDM NFY QY+SI+ PW
Sbjct: 130 LPHMYVIKDLVPDMGNFYEQYRSIE-----PW 156
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Query: 313 GLDT-AALHKIDANDKVS--KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L ID D S KIYPLPHMYV+KDLVPDM NFY QY+SI+PWL
Sbjct: 106 GVNTLACLSYIDQKDTSSATKIYPLPHMYVIKDLVPDMGNFYEQYRSIEPWL 157
>gi|57547568|gb|AAW52509.1| succinate dehydrogenase iron sulphur protein [Botryotinia
fuckeliana]
Length = 300
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 156/250 (62%), Gaps = 52/250 (20%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 50 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 109
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 110 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 169
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 170 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWW 229
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHTI+NC+RTCPKGLNPG
Sbjct: 230 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGL 289
Query: 295 AIAEIKKLLS 304
AIAEIKK ++
Sbjct: 290 AIAEIKKEMA 299
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 100 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 159
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 160 PHTYVVKDIVPDLTQFYKQYKSIKPYL 186
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 136 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 186
>gi|154295833|ref|XP_001548350.1| succinate dehydrogenase-ubiquinone-iron-sulphur protein
[Botryotinia fuckeliana B05.10]
gi|57547566|gb|AAW52508.1| succinate dehydrogenase iron sulphur protein [Botryotinia
fuckeliana]
gi|347829734|emb|CCD45431.1| similar to succinate dehydrogenase iron-sulfur protein subunit
[Botryotinia fuckeliana]
Length = 300
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 156/250 (62%), Gaps = 52/250 (20%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 50 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 109
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 110 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 169
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 170 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWW 229
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHTI+NC+RTCPKGLNPG
Sbjct: 230 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGL 289
Query: 295 AIAEIKKLLS 304
AIAEIKK ++
Sbjct: 290 AIAEIKKEMA 299
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 100 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 159
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 160 PHTYVVKDIVPDLTQFYKQYKSIKPYL 186
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 136 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 186
>gi|313237876|emb|CBY13006.1| unnamed protein product [Oikopleura dioica]
Length = 275
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 158/254 (62%), Gaps = 51/254 (20%)
Query: 95 TLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN----- 149
T +K +AA S+ VP +K K F IYRWNPD + P M+ YKVD+N
Sbjct: 6 TTQSKKFSVTLKAAALSNPVPVDKGEK--EFQIYRWNPDDGGQ-PRMETYKVDMNKCGPM 62
Query: 150 ---------NKIDAN----------------------------------DKVSKIYPLPH 166
N+ID K +KI+PLPH
Sbjct: 63 VLDALIMIKNEIDPTLTFRRSCREGICGSCAMNIDGVNNLACLSYCTDVGKTTKIWPLPH 122
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
MYVVKDLVPDMNNFYAQYKSI+PWL++ E + QS DR KLDGLYECILCACCS
Sbjct: 123 MYVVKDLVPDMNNFYAQYKSIEPWLKKRDETPRTTENYQSEADRAKLDGLYECILCACCS 182
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWNG+KYLGPA++ QAYRW+IDSRD+ TA+RL ++ D +SV++CHTIMNCT++C
Sbjct: 183 TSCPSYWWNGDKYLGPAIIQQAYRWLIDSRDDYTAERLEKMNDAYSVFKCHTIMNCTKSC 242
Query: 287 PKGLNPGRAIAEIK 300
PK LNP AIAE+K
Sbjct: 243 PKHLNPAWAIAEVK 256
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 81/108 (75%), Gaps = 5/108 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKNE+DPTLTFRRSCREGICGSCAMNI GVN LAC+S K +KI+PLP
Sbjct: 62 MVLDALIMIKNEIDPTLTFRRSCREGICGSCAMNIDGVNNLACLSYCTDVGKTTKIWPLP 121
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSA 108
HMYVVKDLVPDMNNFYAQYKSI+ PW T + ++Q A
Sbjct: 122 HMYVVKDLVPDMNNFYAQYKSIE-----PWLKKRDETPRTTENYQSEA 164
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K +KI+PLPHMYVVKDLVPDMNNFYAQYKSI+PWL +
Sbjct: 113 KTTKIWPLPHMYVVKDLVPDMNNFYAQYKSIEPWLKK 149
>gi|5217|emb|CAA44612.1| succinate dehydrogenase [Ustilago maydis]
gi|164653718|gb|ABY65246.1| CbxR [cloning vector pDonrCbx]
Length = 295
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 161/259 (62%), Gaps = 55/259 (21%)
Query: 97 TAKNIRSFQLSAAASSAVPAE-------KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
++ + +F +AAA A P KP K F IYRWNPDKP EKP +Q Y +DLN
Sbjct: 20 SSSRVAAFSTTAAARLATPTSDNVGSSGKPQHLKQFKIYRWNPDKPSEKPRLQSYTLDLN 79
Query: 150 --------------NKIDAN-------------------DKV--------------SKIY 162
N+ID D V +KIY
Sbjct: 80 QTGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKQNDTKIY 139
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILC 222
PLPHMY+VKDLVPD+ FY QY+SI+P+L+ + ++LQS ++R++LDGLYECILC
Sbjct: 140 PLPHMYIVKDLVPDLTQFYKQYRSIEPFLKSNN-TPSEGEHLQSPEERRRLDGLYECILC 198
Query: 223 ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNC 282
ACCSTSCPSYWWN ++YLGPAVLMQAYRW+ DSRD+ +R +L++ FS+YRC TIMNC
Sbjct: 199 ACCSTSCPSYWWNQDEYLGPAVLMQAYRWMADSRDDFGEERRQKLENTFSLYRCLTIMNC 258
Query: 283 TRTCPKGLNPGRAIAEIKK 301
+RTCPK LNPG+AIA+IKK
Sbjct: 259 SRTCPKNLNPGKAIAQIKK 277
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +ID + +KIYPLP
Sbjct: 84 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKQND-TKIYPLP 142
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMY+VKDLVPD+ FY QY+SI+ L
Sbjct: 143 HMYIVKDLVPDLTQFYKQYRSIEPFL 168
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K +Q+Y ++ D L ++K DP +R R+C +
Sbjct: 58 YRWNPDK-PSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFR--------RSCRE 108
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A L +ID + +KIYPLPHMY+VKDLVPD+
Sbjct: 109 GI-------------CGSCAMNIDGVNTLACLCRIDKQND-TKIYPLPHMYIVKDLVPDL 154
Query: 348 NNFYAQYKSIQPWL 361
FY QY+SI+P+L
Sbjct: 155 TQFYKQYRSIEPFL 168
>gi|402702815|ref|ZP_10850794.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia helvetica
C9P9]
Length = 261
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +K+DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DENPTIDSFKIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKNLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|114320491|ref|YP_742174.1| succinate dehydrogenase iron-sulfur subunit [Alkalilimnicola
ehrlichii MLHE-1]
gi|114226885|gb|ABI56684.1| succinate dehydrogenase subunit B [Alkalilimnicola ehrlichii
MLHE-1]
Length = 258
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 151/236 (63%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
AE + F IYRW+PD + P + Y+VDL+N
Sbjct: 20 AESGGNVRQFKIYRWDPDA-GQNPRLDTYEVDLDNCGPMVLDALIKIKNEVDPTLTFRRS 78
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ KIYPLPHM VVKDLVPDM +FYAQY SI
Sbjct: 79 CREGICGSCAMNIDGTNTLACTKAIDEVRGDVKIYPLPHMSVVKDLVPDMTHFYAQYASI 138
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PW++ + + LQS +DR KLDGLYECILCACCSTSCPSYWWN ++YLGPA+L+Q
Sbjct: 139 KPWMRTQTPAPPDQERLQSKEDRAKLDGLYECILCACCSTSCPSYWWNSDRYLGPAILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI+DSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNPG+AIAEIKK+L
Sbjct: 199 AYRWIVDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPGKAIAEIKKML 254
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC ID KIYPLP
Sbjct: 57 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIDEVRGDVKIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPDM +FYAQY SI+ PW
Sbjct: 117 HMSVVKDLVPDMTHFYAQYASIK-----PW 141
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ID KIYPLPHM VVKDLVPDM +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIDEVRGDVKIYPLPHMSVVKDLVPDMTHFYAQYASIKPWM 142
>gi|301105335|ref|XP_002901751.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Phytophthora infestans T30-4]
gi|262099089|gb|EEY57141.1| succinate dehydrogenase iron-sulfur protein, mitochondrial
precursor [Phytophthora infestans T30-4]
Length = 271
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 149/239 (62%), Gaps = 49/239 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A KP K F IYRW+P+ EKP Y VDL++
Sbjct: 33 ATKPKNIKYFKIYRWDPES-KEKPYQCTYPVDLDDCGPMVLDALIKIKNEQDPTLTFRRS 91
Query: 151 -----------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
I N VS I+PLPHM+V++DLVPDMNNFY QY SI
Sbjct: 92 CREGICGSCAMNIDGGNTLACLSPIKKNKDVSSIHPLPHMFVIRDLVPDMNNFYDQYTSI 151
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWL DK N ++LQS++DRKKLDG+YECILCACCSTSCPSYWWN +KYLGPAVLMQ
Sbjct: 152 KPWLHSDKPRNVNHEHLQSIEDRKKLDGMYECILCACCSTSCPSYWWNPDKYLGPAVLMQ 211
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
A+RWI DSRD+KT +RL L D F +Y+CHTIMNCTRTCPKGLNP +AI +IK L+ L
Sbjct: 212 AFRWIEDSRDDKTEERLRALDDSFKLYKCHTIMNCTRTCPKGLNPAQAIGKIKTRLASL 270
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 92/151 (60%), Gaps = 35/151 (23%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+S I N VS I+PLP
Sbjct: 70 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGGNTLACLSPIKKNKDVSSIHPLP 129
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------- 107
HM+V++DLVPDMNNFY QY SI+ PW L + +N+ L
Sbjct: 130 HMFVIRDLVPDMNNFYDQYTSIK-----PW--LHSDKPRNVNHEHLQSIEDRKKLDGMYE 182
Query: 108 ----AAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P+ Y WNPDK
Sbjct: 183 CILCACCSTSCPS-----------YWWNPDK 202
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL----PRSI 365
G A L I N VS I+PLPHM+V++DLVPDMNNFY QY SI+PWL PR++
Sbjct: 107 GNTLACLSPIKKNKDVSSIHPLPHMFVIRDLVPDMNNFYDQYTSIKPWLHSDKPRNV 163
>gi|328855226|gb|EGG04354.1| hypothetical protein MELLADRAFT_117110 [Melampsora larici-populina
98AG31]
Length = 291
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 167/278 (60%), Gaps = 62/278 (22%)
Query: 87 GGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPA-----------KYKTFAIYRWNPDKP 135
G P +I +L + R ++ A PA++ A K K F+IYRWNPD+P
Sbjct: 14 GKPTQITSSLIPRQ-RFISSTSVKPFATPAQEHATPEASNTSTDTKTKQFSIYRWNPDEP 72
Query: 136 DEKPTMQEYKVDLN--------------NKIDAN-------------------DKVS--- 159
+KP++Q Y +D+ N+ID D V+
Sbjct: 73 SQKPSLQTYSIDMKKCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLA 132
Query: 160 -------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQS 206
K+YPLPHMY++KDLVPDM FY QYKSI+P+L+ D ++LQS
Sbjct: 133 CLKRIPKESSSDVKVYPLPHMYIIKDLVPDMTQFYKQYKSIEPFLKNDNPP-AQGEFLQS 191
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
+DRKKLDG+YECILCACCSTSCPSYWWN ++YLGPAVLMQAYRWI DSRD + DR +
Sbjct: 192 PEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWIADSRDGYSEDRKEK 251
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
L++ FS+YRCHTI NCT+TCPKGLNP +AIA IK+ ++
Sbjct: 252 LQNTFSLYRCHTIFNCTKTCPKGLNPAKAIAHIKREMA 289
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I K+YPL
Sbjct: 91 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRIPKESSSDVKVYPL 150
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY++KDLVPDM FY QYKSI+ L
Sbjct: 151 PHMYIIKDLVPDMTQFYKQYKSIEPFL 177
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVS--KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A K + S K+YPLPHMY++KDLVPDM FY QYKSI+P+L
Sbjct: 127 GVNTLACLKRIPKESSSDVKVYPLPHMYIIKDLVPDMTQFYKQYKSIEPFL 177
>gi|157964109|ref|YP_001498933.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia massiliae
MTU5]
gi|157843885|gb|ABV84386.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia massiliae
MTU5]
Length = 261
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K K IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPKKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|389737453|ref|ZP_10190888.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter sp. 115]
gi|388435267|gb|EIL92179.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter sp. 115]
Length = 259
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 155/238 (65%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------NNKID------- 153
PA+ K +TF IYRW+PD E P + Y+VDL N+ID
Sbjct: 19 PAKDAKKPRTFRIYRWSPDD-GENPRIDTYEVDLAACGPMVLDALLKIKNEIDPTLTLRR 77
Query: 154 ------------------------ANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYK 185
A D V+K IYPLPHM VVKDLVPD+ +FYAQ+
Sbjct: 78 SCREGICGSCAMNIDGTNTLACICAIDGVAKGDVKIYPLPHMPVVKDLVPDLTHFYAQFA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW+ R + + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNG+KYLGPAVL
Sbjct: 138 SIKPWI-RTQSAAPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI+DSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP +AIAEIKKL+
Sbjct: 197 LQAYRWIVDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPAKAIAEIKKLI 254
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 72/91 (79%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDAL+KIKNE+DPTLT RRSCREGICGSCAMNI G NTLACI ID K KIYPL
Sbjct: 57 MVLDALLKIKNEIDPTLTLRRSCREGICGSCAMNIDGTNTLACICAIDGVAKGDVKIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ +FYAQ+ SI+ PW
Sbjct: 117 PHMPVVKDLVPDLTHFYAQFASIK-----PW 142
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 316 TAALHKIDANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T L I A D V+K IYPLPHM VVKDLVPD+ +FYAQ+ SI+PW+
Sbjct: 94 TNTLACICAIDGVAKGDVKIYPLPHMPVVKDLVPDLTHFYAQFASIKPWI 143
>gi|380512012|ref|ZP_09855419.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas sacchari
NCPPB 4393]
Length = 260
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------- 153
PA+ +TF +YRWNPD D P Y+VDL+ N+ID
Sbjct: 19 PAKGAKNVRTFKVYRWNPDD-DSNPRTDTYEVDLDACGPMVLDALIKIKNEIDPTLTFRR 77
Query: 154 ----------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
K IYPLPHM VVKDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIADCGKKEVPIYPLPHMSVVKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I D K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIADCGKKEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVVKDLVPDLTHFYAQYASIK-----PW 142
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K IYPLPHM VVKDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIADCGKKEVPIYPLPHMSVVKDLVPDLTHFYAQYASIKPWI 143
>gi|325192671|emb|CCA27092.1| unnamed protein product [Albugo laibachii Nc14]
Length = 270
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 153/247 (61%), Gaps = 50/247 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------- 150
+A+ VP K + K +YRW+P+ KP + Y V++N
Sbjct: 23 TASDHLKVPVNKTKEIKYLKVYRWDPES-KSKPYISTYPVNINECGPMVLDALFKIKYEQ 81
Query: 151 --------------------KIDANDKVS-------------KIYPLPHMYVVKDLVPDM 177
ID + ++ KIYPLPHMYV++DLVPDM
Sbjct: 82 DPTLTFRRSCREGICGSCAMNIDGGNTLACLSPLRKNKGDVIKIYPLPHMYVMRDLVPDM 141
Query: 178 NNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
NNFY QY+SI+PWLQ D N ++LQS +DRKKLDG+YECILCACCSTSCPSYWWN E
Sbjct: 142 NNFYDQYRSIKPWLQSDSNKASNVEHLQSKEDRKKLDGMYECILCACCSTSCPSYWWNPE 201
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
KYLGPAVL+QA+RWI DSRD +T +RL L D F +Y+CHTIMNCTRTCPKGLNP +AIA
Sbjct: 202 KYLGPAVLLQAFRWIEDSRDSRTKERLEYLNDSFKLYKCHTIMNCTRTCPKGLNPAKAIA 261
Query: 298 EIKKLLS 304
+IKK L+
Sbjct: 262 QIKKRLA 268
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 96/160 (60%), Gaps = 27/160 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL KIK E DPTLTFRRSCREGICGSCAMNI G NTLAC+S + N V KIYPL
Sbjct: 69 MVLDALFKIKYEQDPTLTFRRSCREGICGSCAMNIDGGNTLACLSPLRKNKGDVIKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------- 105
PHMYV++DLVPDMNNFY QY+SI+ PW + A N+ Q
Sbjct: 129 PHMYVMRDLVPDMNNFYDQYRSIK-----PWLQSDSNKASNVEHLQSKEDRKKLDGMYEC 183
Query: 106 -LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEK 138
L A S++ P+ P KY A+ +RW D D +
Sbjct: 184 ILCACCSTSCPSYWWNPEKYLGPAVLLQAFRWIEDSRDSR 223
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 32/34 (94%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V KIYPLPHMYV++DLVPDMNNFY QY+SI+PWL
Sbjct: 122 VIKIYPLPHMYVMRDLVPDMNNFYDQYRSIKPWL 155
>gi|350273094|ref|YP_004884407.1| succinate dehydrogenase catalytic subunit [Rickettsia japonica YH]
gi|383481010|ref|YP_005389925.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|348592307|dbj|BAK96268.1| succinate dehydrogenase catalytic subunit [Rickettsia japonica YH]
gi|378933349|gb|AFC71852.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 261
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|285018593|ref|YP_003376304.1| succinate dehydrogenase catalytic subunit (iron-sulfur) protein
[Xanthomonas albilineans GPE PC73]
gi|283473811|emb|CBA16313.1| putative succinate dehydrogenase catalytic subunit (iron-sulfur)
protein [Xanthomonas albilineans GPE PC73]
Length = 260
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------- 153
PA+ +TF IYRWNPD D P Y+VDL+ N+ID
Sbjct: 19 PAKGAKNVRTFKIYRWNPDD-DSNPRTDTYEVDLDACGPMVLDALIQIKNEIDPTLTFRR 77
Query: 154 ----------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
+ IYPLPHM VVKDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIADCGKREVPIYPLPHMSVVKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALI+IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I D + IYPL
Sbjct: 57 MVLDALIQIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIADCGKREVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVVKDLVPDLTHFYAQYASIK-----PW 142
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 61/135 (45%), Gaps = 28/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P Y +D+ D L Q+K DP +R R+C +
Sbjct: 32 YRWNPDDDSNPRT--DTYEVDLDACGPMVLDALIQIKNEIDPTLTFR--------RSCRE 81
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A K D + IYPLPHM VVKDLVPD
Sbjct: 82 GI-------------CGSCAMNIDGTNTLACTKAIADCGKREVPIYPLPHMSVVKDLVPD 128
Query: 347 MNNFYAQYKSIQPWL 361
+ +FYAQY SI+PW+
Sbjct: 129 LTHFYAQYASIKPWI 143
>gi|341583296|ref|YP_004763787.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia
heilongjiangensis 054]
gi|340807522|gb|AEK74110.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia
heilongjiangensis 054]
Length = 261
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|11466549|ref|NP_044798.1| succinate:ubiquinone oxidoreductase subunit 2 (mitochondrion)
[Reclinomonas americana]
gi|1706426|sp|P80480.1|DHSB_RECAM RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit; AltName: Full=Iron-sulfur subunit of complex
II; Short=Ip
gi|2258379|gb|AAD11913.1| succinate:ubiquinone oxidoreductase subunit 2 (mitochondrion)
[Reclinomonas americana]
Length = 239
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 155/238 (65%), Gaps = 50/238 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------- 150
K K F +YRWNPDK EKP + Y VDLN+
Sbjct: 4 KKEKIMLFKVYRWNPDK-KEKPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCR 62
Query: 151 ---------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
ID N K KIYPLPHM+++KDLVPD++NFYAQYKSI+P
Sbjct: 63 EGVCGSCAMNIDGTNTLACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEP 122
Query: 190 WLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
W++ ++ + + ++ QS +DR+KLDGLYEC+LCACCSTSCPSYWWN +KYLGPAVL+QAY
Sbjct: 123 WMKTTEKKL-DKEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQAY 181
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLV 307
RWI+DSRD+ T +RL L+DPF +YRCHTI+NCT+TCPK LNP +AIA+IK+ ++ L
Sbjct: 182 RWIVDSRDQGTRERLQYLEDPFKLYRCHTILNCTKTCPKHLNPAQAIAKIKQNITLLT 239
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 75/90 (83%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE D TLTFRRSCREG+CGSCAMNI G NTLACI ID N K KIYPLP
Sbjct: 39 MVLDALIKIKNEQDSTLTFRRSCREGVCGSCAMNIDGTNTLACIKSIDTNKKEMKIYPLP 98
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+++KDLVPD++NFYAQYKSI+ PW
Sbjct: 99 HMHIIKDLVPDLSNFYAQYKSIE-----PW 123
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + ID N K KIYPLPHM+++KDLVPD++NFYAQYKSI+PW+
Sbjct: 80 ACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEPWM 124
>gi|383482884|ref|YP_005391798.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia montanensis
str. OSU 85-930]
gi|378935238|gb|AFC73739.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia montanensis
str. OSU 85-930]
Length = 261
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDGPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 88/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDGPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|332019814|gb|EGI60275.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Acromyrmex echinatior]
Length = 329
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/262 (45%), Positives = 163/262 (62%), Gaps = 50/262 (19%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------- 149
++A + + A+ + +T +YRWNP+ P+ KP MQ++ +DLN
Sbjct: 48 VTACKTISKEAKVGPRLQTVRVYRWNPETPEVKPYMQQFSIDLNKCGKMMLDILILIKAQ 107
Query: 150 --------------------------------NKIDANDKVSKIYPLPHMYVVKDLVPDM 177
+I + K IYPLPH YV++DL+ DM
Sbjct: 108 HDPTLSFRRSCREGICGSCGMNINGVNTLACITQIKESQKPLVIYPLPHTYVIRDLIADM 167
Query: 178 NNFYAQYKSIQPWLQRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++F Q++ I P L+R E+ +G Q LQS DR KLDGL+EC++CACC+ SCP YWW
Sbjct: 168 SHFLGQFRKIDPHLKRPGEDDSLGMRQILQSPRDRNKLDGLFECVMCACCAFSCPPYWWL 227
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
G+KYLGPAVLMQAY+W+IDSRD +RL +L+D +SVYRCHTI NCT+TCPKGLNPGRA
Sbjct: 228 GDKYLGPAVLMQAYKWVIDSRDMAHEERLGKLRDYYSVYRCHTIFNCTKTCPKGLNPGRA 287
Query: 296 IAEIKKLLSGLVKKDKPGLDTA 317
IA++K+LL+GL KK+KP L+TA
Sbjct: 288 IAQLKRLLAGLTKKEKPDLETA 309
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD LI IK + DPTL+FRRSCREGICGSC MNI GVNTLACI++I + K IYPLP
Sbjct: 96 MMLDILILIKAQHDPTLSFRRSCREGICGSCGMNINGVNTLACITQIKESQKPLVIYPLP 155
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
H YV++DL+ DM++F Q++ I HL P
Sbjct: 156 HTYVIRDLIADMSHFLGQFRKIDPHLKRP 184
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + +I + K IYPLPH YV++DL+ DM++F Q++ I P L R
Sbjct: 132 GVNTLACITQIKESQKPLVIYPLPHTYVIRDLIADMSHFLGQFRKIDPHLKR 183
>gi|379022444|ref|YP_005299105.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia canadensis
str. CA410]
gi|376323382|gb|AFB20623.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia canadensis
str. CA410]
Length = 261
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 156/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ + + IYR+NPD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLRPRKIKIYRYNPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+ LDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPAPSNSERLQSIKDRENLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI+DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPK LNP +AI EIK L++
Sbjct: 201 YRWIVDSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPKSLNPAKAIGEIKSLIT 256
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 88/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPAPSNSERLQSIKDRENLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|157803231|ref|YP_001491780.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia canadensis
str. McKiel]
gi|157784494|gb|ABV72995.1| succinate dehydrogenase catalytic subunit [Rickettsia canadensis
str. McKiel]
Length = 261
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 156/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ + + IYR+NPD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLRPRKIKIYRYNPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+ LDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPAPSNSERLQSIKDRENLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI+DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPK LNP +AI EIK L++
Sbjct: 201 YRWIVDSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPKSLNPAKAIGEIKSLIT 256
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 88/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPAPSNSERLQSIKDRENLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|40645269|dbj|BAD06472.1| iron-sulphar subunit protein of succinate dehydrogenase [Lentinula
edodes]
Length = 272
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 149/242 (61%), Gaps = 50/242 (20%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN--- 155
A P +KP K F IYRWNPD+P +KPT+Q Y +DLN N+ID
Sbjct: 31 AEPLQKPVLNKEFKIYRWNPDEPAKKPTLQSYTIDLNQTGPMILDALIKIKNEIDPTLTF 90
Query: 156 --------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQ 183
K SKIYPLPHMY+VKDLVPD+ FY Q
Sbjct: 91 RRSCREGICGSCAMNINGQNTLACLCRIDRDASKDSKIYPLPHMYIVKDLVPDLTQFYKQ 150
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
YKSIQP+LQ D ++LQS ++R+KLDGLYECILCACCSTSCPSYWWN ++YLGPA
Sbjct: 151 YKSIQPYLQNDNPP-EKGEFLQSQEERRKLDGLYECILCACCSTSCPSYWWNQDEYLGPA 209
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
LMQAYRWI DSRD A R L++ S+YRCHTI NC+RTCPKGLNP AIA+IK L
Sbjct: 210 TLMQAYRWIADSRDSNGAKRKEYLQNELSMYRCHTIFNCSRTCPKGLNPAAAIAKIKLEL 269
Query: 304 SG 305
+
Sbjct: 270 AA 271
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID + K SKIYPL
Sbjct: 72 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRDASKDSKIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSIQ +L
Sbjct: 132 PHMYIVKDLVPDLTQFYKQYKSIQPYL 158
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID + K SKIYPLPHMY+VKDLVPD+ FY QYKSIQP+L
Sbjct: 113 ACLCRIDRDASKDSKIYPLPHMYIVKDLVPDLTQFYKQYKSIQPYL 158
>gi|2446983|dbj|BAA22505.1| iron-sulfur protein subunit [Pleurotus ostreatus]
gi|2446985|dbj|BAA22506.1| iron-sulfur protein subunit [Pleurotus ostreatus]
gi|2446987|dbj|BAA22507.1| iron-sulfur protein subunit [Pleurotus ostreatus]
gi|2723414|dbj|BAA24089.1| iron-sulfur protein subunit [Pleurotus ostreatus]
gi|221665278|gb|ACM24773.1| iron-sulfur protein subunit [Pleurotus ostreatus]
Length = 268
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/251 (50%), Positives = 152/251 (60%), Gaps = 51/251 (20%)
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------ 150
+F S A P +KP K F IYRWNPD+P +KP +Q Y +DLN
Sbjct: 18 AFSTSPGRWQAEPLQKPVLQKEFKIYRWNPDEPAKKPHLQSYTIDLNQTGPMILDALIKI 77
Query: 151 ------------------------------------KIDAN-DKVSKIYPLPHMYVVKDL 173
+ID N K SKIYPLPHMY+VKDL
Sbjct: 78 KNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNASKDSKIYPLPHMYIVKDL 137
Query: 174 VPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
VPD+ FY QYKSI+P+LQ D N+ ++LQS +DRKKLDG+YECILCACCSTSCPSYW
Sbjct: 138 VPDLTLFYKQYKSIKPYLQND--NVPEREHLQSPEDRKKLDGMYECILCACCSTSCPSYW 195
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN ++YLGPA LM AYRWI DSRD A R ++ S++RCHTI NC+RTCPKGLNP
Sbjct: 196 WNQDEYLGPAALMAAYRWIADSRDTYGAQRKEHFQNELSLFRCHTIFNCSRTCPKGLNPA 255
Query: 294 RAIAEIKKLLS 304
+AIAEIK L+
Sbjct: 256 KAIAEIKLALA 266
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N K SKIYPL
Sbjct: 69 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRNASKDSKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSI+ +L
Sbjct: 129 PHMYIVKDLVPDLTLFYKQYKSIKPYL 155
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID N K SKIYPLPHMY+VKDLVPD+ FY QYKSI+P+L
Sbjct: 110 ACLCRIDRNASKDSKIYPLPHMYIVKDLVPDLTLFYKQYKSIKPYL 155
>gi|298710615|emb|CBJ32043.1| SDH2, succinate dehydrogenase subunit 2 [Ectocarpus siliculosus]
Length = 280
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/232 (53%), Positives = 149/232 (64%), Gaps = 48/232 (20%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVD----------------------------------- 147
KTF IYRW+P++ D+KP M+ Y +D
Sbjct: 49 KTFKIYRWDPNEKDQKPYMKTYPIDRDDCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 108
Query: 148 -----LNNK--------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+N K I+ + KIYPLPHM+V KDLVPDM NFY QYKSI+PWL+
Sbjct: 109 SCAMNINGKNTLACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTK 168
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K+ + ++LQS+ DRKKLDG+YECILCACCSTSCPSYWWN +KYLGPAVLMQAYRWI D
Sbjct: 169 KDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDD 228
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
SRD+ T +RL L D F ++RCHTIMNCT+TCPK LNPG+AIA IKK + L
Sbjct: 229 SRDDYTKERLESLDDAFKLFRCHTIMNCTKTCPKHLNPGKAIANIKKRVHAL 280
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ + KIYPLP
Sbjct: 80 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSAPMKIYPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V KDLVPDM NFY QYKSI+ PW
Sbjct: 140 HMFVQKDLVPDMTNFYEQYKSIE-----PW 164
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + KIYPLPHM+V KDLVPDM NFY QYKSI+PWL
Sbjct: 121 ACLCAIEEDSAPMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWL 165
>gi|389780792|ref|ZP_10194325.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
spathiphylli B39]
gi|388435936|gb|EIL92824.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
spathiphylli B39]
Length = 260
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 154/238 (64%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------NNKIDANDKVS- 159
PA+ K +TF IYRW+PD + P + Y+VDL N+ID +
Sbjct: 19 PAKDAKKPRTFRIYRWSPDD-GQNPRIDTYEVDLAACGPMVLDALLKIKNEIDPTLTLRR 77
Query: 160 ----------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYK 185
KIYPLPHM VVKDL+PD+ +FYAQ+
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIGECDAGDVKIYPLPHMPVVKDLIPDLTHFYAQFA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PWL R + + + LQS ++RKKLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L
Sbjct: 138 SIKPWL-RTQSPAPDRERLQSPEERKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIKKL+
Sbjct: 197 LQAYRWIVDSRDEATGERLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 73/93 (78%), Gaps = 10/93 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLAC---ISKIDANDKVSKIY 57
MVLDAL+KIKNE+DPTLT RRSCREGICGSCAMNI G NTLAC I + DA D KIY
Sbjct: 57 MVLDALLKIKNEIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKAIGECDAGD--VKIY 114
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPHM VVKDL+PD+ +FYAQ+ SI+ PW
Sbjct: 115 PLPHMPVVKDLIPDLTHFYAQFASIK-----PW 142
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T A+ + DA D KIYPLPHM VVKDL+PD+ +FYAQ+ SI+PWL
Sbjct: 100 TKAIGECDAGD--VKIYPLPHMPVVKDLIPDLTHFYAQFASIKPWL 143
>gi|357417584|ref|YP_004930604.1| succinate dehydrogenase iron-sulfur subunit [Pseudoxanthomonas
spadix BD-a59]
gi|355335162|gb|AER56563.1| succinate dehydrogenase iron-sulfur subunit [Pseudoxanthomonas
spadix BD-a59]
Length = 259
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/242 (52%), Positives = 154/242 (63%), Gaps = 51/242 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------- 153
PA +TF IYRWNPD+ D P Y+VDL+ N+ID
Sbjct: 19 PAPGARNTRTFKIYRWNPDQ-DSNPRTDTYEVDLDKCGPMVLDALIKIKNEIDPTLTFRR 77
Query: 154 ------------------------ANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYK 185
A ++ K +YPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNISGTNTLACTKAIEECGKGEVPVYPLPHMDVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PWL R + + + LQS DRK++DGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWL-RTQTPAPDRERLQSPQDRKQIDGLYECILCACCSTSCPSYWWNGERYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+QAYRWI+DSRDE T RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIKKL+
Sbjct: 197 LQAYRWIVDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLMLA 256
Query: 306 LV 307
V
Sbjct: 257 RV 258
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I+ K +YPL
Sbjct: 57 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNISGTNTLACTKAIEECGKGEVPVYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMDVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+YPLPHM V+KDLVPD+ +FYAQY SI+PWL
Sbjct: 113 VYPLPHMDVIKDLVPDLTHFYAQYASIKPWL 143
>gi|343426707|emb|CBQ70235.1| Succinate dehydrogenase [ubiquinone] iron-sulfur protein,
mitochondrial precursor [Sporisorium reilianum SRZ2]
Length = 297
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 154/231 (66%), Gaps = 48/231 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
KP K F IYRWNPDKP EKP +Q Y +DLN N+ID +
Sbjct: 50 KPQHLKQFKIYRWNPDKPAEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPSLTFRRSCR 109
Query: 156 -----------DKV--------------SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
D V +KIYPLPHMYVVKDLVPD+ FY QY+SI+P+
Sbjct: 110 EGICGSCAMNIDGVNTLACLCRIDKQNDTKIYPLPHMYVVKDLVPDLTQFYKQYRSIEPF 169
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
L+ + ++++LQS ++R++LDGLYECILCACCSTSCPSYWWN ++YLGPAVLMQAYR
Sbjct: 170 LKSN-NTPADSEHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYR 228
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
W+ DSRD+ +R +L++ FS+YRCHTIMNC+RTCPK LNPG+AI++IKK
Sbjct: 229 WMADSRDDFGEERRQKLENTFSLYRCHTIMNCSRTCPKNLNPGKAISQIKK 279
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI GVNTLAC+ +ID + +KIYPLP
Sbjct: 86 MVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKQND-TKIYPLP 144
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMYVVKDLVPD+ FY QY+SI+ L
Sbjct: 145 HMYVVKDLVPDLTQFYKQYRSIEPFL 170
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 31/136 (22%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN +K PA +Q+Y ++ D L ++K DP +R R+C
Sbjct: 60 YRWNPDK---PAEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPSLTFR--------RSC 108
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVP 345
+G+ G + G++T A L +ID + +KIYPLPHMYVVKDLVP
Sbjct: 109 REGI-------------CGSCAMNIDGVNTLACLCRIDKQND-TKIYPLPHMYVVKDLVP 154
Query: 346 DMNNFYAQYKSIQPWL 361
D+ FY QY+SI+P+L
Sbjct: 155 DLTQFYKQYRSIEPFL 170
>gi|392562663|gb|EIW55843.1| succinate dehydrogenase iron-sulfur subunit [Trametes versicolor
FP-101664 SS1]
Length = 269
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 159/257 (61%), Gaps = 52/257 (20%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------- 149
K+ R F SAA + A P EKP K F IYRWNPD+P +KPT+Q Y +DLN
Sbjct: 14 KSARGFASSAARAQAAPVEKPTLNKEFKIYRWNPDEPSKKPTLQTYSIDLNQCGPMILDA 73
Query: 150 -----NKIDAN-----------------------------------DKVSKIYPLPHMYV 169
N+ID K +KIYPLPHMY+
Sbjct: 74 LIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRTPTKDTKIYPLPHMYI 133
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENI-GNAQYLQSLDDRKKLDGLYECILCACCSTS 228
VKDLVPD+ FY QYKSI+P+LQ D N+ + ++LQS +DR+KLDG+YECILCACCSTS
Sbjct: 134 VKDLVPDLTQFYKQYKSIEPYLQND--NVPADHEHLQSTEDRRKLDGMYECILCACCSTS 191
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWN ++YLGPA LM AYRW+ DSRD T R ++++ S+YRCHTI NC RTCPK
Sbjct: 192 CPSYWWNQDEYLGPATLMAAYRWMADSRDTYTEHRKEKMQNEMSLYRCHTIFNCARTCPK 251
Query: 289 GLNPGRAIAEIKKLLSG 305
GLNP AIA++K L+
Sbjct: 252 GLNPAAAIAKMKLELAA 268
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 94/152 (61%), Gaps = 16/152 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID K +KIYPL
Sbjct: 69 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDRTPTKDTKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGG---PWKILGTLTAKNIRSFQ------LSAAA 110
PHMY+VKDLVPD+ FY QYKSI+ +L P + ++ R L A
Sbjct: 129 PHMYIVKDLVPDLTQFYKQYKSIEPYLQNDNVPADHEHLQSTEDRRKLDGMYECILCACC 188
Query: 111 SSAVPA------EKPAKYKTFAIYRWNPDKPD 136
S++ P+ E A YRW D D
Sbjct: 189 STSCPSYWWNQDEYLGPATLMAAYRWMADSRD 220
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID K +KIYPLPHMY+VKDLVPD+ FY QYKSI+P+L
Sbjct: 110 ACLCRIDRTPTKDTKIYPLPHMYIVKDLVPDLTQFYKQYKSIEPYL 155
>gi|170065615|ref|XP_001868013.1| succinate dehydrogenase [Culex quinquefasciatus]
gi|167862555|gb|EDS25938.1| succinate dehydrogenase [Culex quinquefasciatus]
Length = 303
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 163/271 (60%), Gaps = 29/271 (10%)
Query: 56 IYPLPHMYVVKDLVPDMNNFYAQ--YKSIQR----HLGGPWKILGTLTAKNIRSFQLSAA 109
+YP M LV D Y Y+ + R G W L+ KN R
Sbjct: 54 VYPCLMMEPAYSLVQDRMTIYGTCDYEKMFRLELTRSEGRWNATAQLSTKNCRK----EL 109
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSKIYPLPHMYV 169
V Y FA WN +K + +K +++ +V +IYP+ +
Sbjct: 110 VEDFVLEWHGRNYTVFA-NSWNVEKSSLTVHLLVHKRGMSHA-----QVREIYPVLDIAF 163
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
K V D N E G+AQYLQS+DDR KLDGLYECILCACCSTSC
Sbjct: 164 GK--VRDENC-----------RNETGEKKGDAQYLQSVDDRAKLDGLYECILCACCSTSC 210
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWNG+KYLGPAVLMQAYRWIIDSRDE TA RL++LKDPFSVYRCHTIMNCTRTCPKG
Sbjct: 211 PSYWWNGDKYLGPAVLMQAYRWIIDSRDESTAARLDKLKDPFSVYRCHTIMNCTRTCPKG 270
Query: 290 LNPGRAIAEIKKLLSGLVKKDKPGLDTAALH 320
LNPG+AIAEIKKLLSG+ KKD PGL+TAALH
Sbjct: 271 LNPGKAIAEIKKLLSGIAKKDAPGLETAALH 301
>gi|389794952|ref|ZP_10198090.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter fulvus
Jip2]
gi|388431403|gb|EIL88474.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter fulvus
Jip2]
Length = 262
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 154/240 (64%), Gaps = 53/240 (22%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------NNKIDANDKVS- 159
PA+ K +TF +YRW+PD E P + Y+VDL N+ID +
Sbjct: 19 PAKDAKKPRTFRVYRWSPDD-GENPRIDTYEVDLAACGPMVLDALLKIKNEIDPTLTLRR 77
Query: 160 ------------------------------------KIYPLPHMYVVKDLVPDMNNFYAQ 183
KIYPLPHM VVKDLVPD+ +FYAQ
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTCAIADAGKGGGDVKIYPLPHMPVVKDLVPDLTHFYAQ 137
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
+ SI+PW+ R + + + LQS ++RKKLDGLYECILCACCSTSCPSYWWNG+KYLGPA
Sbjct: 138 FASIKPWI-RTQSPAPDRERLQSPEERKKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 196
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+L+QAYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIKKL+
Sbjct: 197 ILLQAYRWIVDSRDEATGERLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLM 256
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 70/93 (75%), Gaps = 8/93 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS---KIY 57
MVLDAL+KIKNE+DPTLT RRSCREGICGSCAMNI G NTLAC I K KIY
Sbjct: 57 MVLDALLKIKNEIDPTLTLRRSCREGICGSCAMNIDGTNTLACTCAIADAGKGGGDVKIY 116
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPHM VVKDLVPD+ +FYAQ+ SI+ PW
Sbjct: 117 PLPHMPVVKDLVPDLTHFYAQFASIK-----PW 144
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPD+ +FYAQ+ SI+PW+
Sbjct: 114 KIYPLPHMPVVKDLVPDLTHFYAQFASIKPWI 145
>gi|426222858|ref|XP_004023699.1| PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase
[ubiquinone] iron-sulfur subunit, mitochondrial [Ovis
aries]
Length = 268
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/253 (51%), Positives = 154/253 (60%), Gaps = 67/253 (26%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 30 LQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNE 89
Query: 151 ---------------------------------KIDAN-DKVSKIYPLPHMYVVKDLVPD 176
+ID N KVSKIYPLPHMYV+KDLVPD
Sbjct: 90 IDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPD 149
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
++NFYAQYKS P D +K LDGLYECILCACCSTSCPSYWWNG
Sbjct: 150 LSNFYAQYKSNCP------------------DPQKVLDGLYECILCACCSTSCPSYWWNG 191
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+DPFS+YRCHT NCTRT PKGLNPG+AI
Sbjct: 192 DKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTTTNCTRTXPKGLNPGKAI 251
Query: 297 AEIKKLLSGLVKK 309
AEIKK+++ +K
Sbjct: 252 AEIKKMMATYKEK 264
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 103/159 (64%), Gaps = 21/159 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 78 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKP 119
PHMYV+KDLVPD++NFYAQYKS + P K+L L L A S++ P+
Sbjct: 138 PHMYVIKDLVPDLSNFYAQYKS---NCPDPQKVLDGLY-----ECILCACCSTSCPS--- 186
Query: 120 AKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
Y WN DK MQ Y+ ++++ D ++
Sbjct: 187 --------YWWNGDKYLGPAVLMQAYRWMIDSRDDFTEE 217
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 359
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKS P
Sbjct: 115 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSNCP 162
>gi|388851366|emb|CCF54951.1| probable succinate dehydrogenase [ubiquinone] iron-sulfur protein,
mitochondrial precursor [Ustilago hordei]
Length = 297
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 151/233 (64%), Gaps = 52/233 (22%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID---------- 153
KP K F IYRWNPDKP EKP +Q Y +DLN N+ID
Sbjct: 50 KPQHLKQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCR 109
Query: 154 -------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
AND +KIYPLPHMY+VKDLVPD+ FY QY+SI+
Sbjct: 110 EGICGSCAMNIDGVNTLACLCRIDKAND--TKIYPLPHMYIVKDLVPDLTQFYKQYRSIE 167
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+L + K ++LQS ++R++LDGLYECILCACCSTSCPSYWWN ++YLGPAVLMQA
Sbjct: 168 PFL-KSKNVPSEGEHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQA 226
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
YRW+ DSRD+ +R +L++ FS+YRCHTIMNC+RTCPK LNP +AIA+IKK
Sbjct: 227 YRWMADSRDDFGEERRQKLENTFSLYRCHTIMNCSRTCPKNLNPAKAIAQIKK 279
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 77/87 (88%), Gaps = 3/87 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +ID AND +KIYPL
Sbjct: 86 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKAND--TKIYPL 143
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QY+SI+ L
Sbjct: 144 PHMYIVKDLVPDLTQFYKQYRSIEPFL 170
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 29/135 (21%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN +K +Q+Y ++ D L ++K DP +R R+C +
Sbjct: 60 YRWNPDK-PSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFR--------RSCRE 110
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKID-ANDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G++T A L +ID AND +KIYPLPHMY+VKDLVPD
Sbjct: 111 GI-------------CGSCAMNIDGVNTLACLCRIDKAND--TKIYPLPHMYIVKDLVPD 155
Query: 347 MNNFYAQYKSIQPWL 361
+ FY QY+SI+P+L
Sbjct: 156 LTQFYKQYRSIEPFL 170
>gi|374623564|ref|ZP_09696071.1| succinate dehydrogenase iron-sulfur subunit [Ectothiorhodospira sp.
PHS-1]
gi|373942672|gb|EHQ53217.1| succinate dehydrogenase iron-sulfur subunit [Ectothiorhodospira sp.
PHS-1]
Length = 258
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 149/236 (63%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
AE K F IYRW+PD E P + Y+VDL+
Sbjct: 20 AEGATNVKRFNIYRWDPDS-GENPRIDTYEVDLDTCGPMVLDAVIKIKDEMDSTLSFRRS 78
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ IYPLPHM VVKDL+P+M +FYAQY SI
Sbjct: 79 CREGICGSCAMNIDGTNTLACTKAIDEIKGDVNIYPLPHMKVVKDLIPEMTHFYAQYASI 138
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PW+Q +++ LQS ++R KLDGLYECILCACCSTSCPSYWWNG++YLGPA+L+Q
Sbjct: 139 KPWIQTQTPPPPDSERLQSKEERAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI DSRDE T +RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIADSRDEATGERLDALEDPFKLYRCHTIMNCTRTCPKGLNPAKAIAEIKKLM 254
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIK+EMD TL+FRRSCREGICGSCAMNI G NTLAC ID IYPLP
Sbjct: 57 MVLDAVIKIKDEMDSTLSFRRSCREGICGSCAMNIDGTNTLACTKAIDEIKGDVNIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+P+M +FYAQY SI+ PW
Sbjct: 117 HMKVVKDLIPEMTHFYAQYASIK-----PW 141
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ID IYPLPHM VVKDL+P+M +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIDEIKGDVNIYPLPHMKVVKDLIPEMTHFYAQYASIKPWI 142
>gi|383483416|ref|YP_005392329.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia parkeri
str. Portsmouth]
gi|378935770|gb|AFC74270.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia parkeri
str. Portsmouth]
Length = 261
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|15891992|ref|NP_359706.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia conorii
str. Malish 7]
gi|20137875|sp|Q92JJ8.1|DHSB_RICCN RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|15619106|gb|AAL02607.1| succinate dehydrogenase iron-sulfur protein [Rickettsia conorii
str. Malish 7]
Length = 261
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MILDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|58269758|ref|XP_572035.1| succinate dehydrogenase iron-sulfur subunit [Cryptococcus
neoformans var. neoformans JEC21]
gi|134113797|ref|XP_774483.1| hypothetical protein CNBG1290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257121|gb|EAL19836.1| hypothetical protein CNBG1290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228271|gb|AAW44728.1| succinate dehydrogenase iron-sulfur subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 280
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 156/253 (61%), Gaps = 51/253 (20%)
Query: 98 AKNIRSFQLSAAASSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
A RSF +A+A A P E K K F IYRWNPD P+EKP +Q YK+DL+
Sbjct: 22 AAAARSFHATASAQLATPVEGKQPPIKEFKIYRWNPDVPNEKPKLQTYKIDLSQCGPMML 81
Query: 150 -------NKIDAN-----------------------------------DKVSKIYPLPHM 167
N++D K SKIYPLPHM
Sbjct: 82 DALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPKDTSKDSKIYPLPHM 141
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
YVVKDLVPD+ +FY QYK+I+P+L+ D ++LQS DRKKLDG+YECILCACCS
Sbjct: 142 YVVKDLVPDLTHFYKQYKAIEPYLKNDNPP-EKGEFLQSQADRKKLDGMYECILCACCSA 200
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN ++YLGPAVLMQAYRW+ DSRD A+R ++++ S+YRCHTI NC+RTCP
Sbjct: 201 SCPSYWWNQDEYLGPAVLMQAYRWMADSRDSYGAERKEKMQNAMSLYRCHTIFNCSRTCP 260
Query: 288 KGLNPGRAIAEIK 300
KGLNP AIA++K
Sbjct: 261 KGLNPAAAIAKMK 273
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K SKIYPL
Sbjct: 79 MMLDALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPKDTSKDSKIYPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ +FY QYK+I+ +L
Sbjct: 139 PHMYVVKDLVPDLTHFYKQYKAIEPYL 165
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K SKIYPLPHMYVVKDLVPD+ +FY QYK+I+P+L
Sbjct: 115 GVNTLACLCRIPKDTSKDSKIYPLPHMYVVKDLVPDLTHFYKQYKAIEPYL 165
>gi|383501012|ref|YP_005414371.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia australis
str. Cutlack]
gi|378932023|gb|AFC70528.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia australis
str. Cutlack]
Length = 261
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 156/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKVTIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLAFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCSMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWN +KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNSDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 88/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TL FRRSCREGICGSC+MNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLAFRRSCREGICGSCSMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNSDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|374318819|ref|YP_005065317.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia slovaca
13-B]
gi|383750711|ref|YP_005425812.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia slovaca
str. D-CWPP]
gi|360041367|gb|AEV91749.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia slovaca
13-B]
gi|379773725|gb|AFD19081.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia slovaca
str. D-CWPP]
Length = 261
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDF-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|424792699|ref|ZP_18218903.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein
[Xanthomonas translucens pv. graminis ART-Xtg29]
gi|422796973|gb|EKU25384.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein
[Xanthomonas translucens pv. graminis ART-Xtg29]
Length = 260
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 147/238 (61%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA +TF +YRWNPD D P Y+VDL+ N+ID +
Sbjct: 19 PATGAKNARTFKVYRWNPDD-DSNPRTDTYEVDLDACGPMVLDALIKIKNEIDPTLTFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIADCGKAEVPIYPLPHMDVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I D IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIADCGKAEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMDVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIADCGKAEVPIYPLPHMDVIKDLVPDLTHFYAQYASIKPWI 143
>gi|375267482|emb|CCD28191.1| succinate dehydrogenase, partial [Plasmopara viticola]
Length = 281
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 163/282 (57%), Gaps = 53/282 (18%)
Query: 74 NFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASS-AVPAEKPAKYKTFAIYRWNP 132
FY+Q ++ L I + A +R+F + A KP K F +YRW+P
Sbjct: 3 EFYSQTLNM---LAAVRCIQKPVVATGLRTFSVPAFNPDLKSQVAKPKNIKYFKVYRWDP 59
Query: 133 DKPDEKPTMQEYKVDLNN------------------------------------------ 150
+ EKP Y VDL++
Sbjct: 60 ES-KEKPYQCTYPVDLDDCGPMILDALIKIKSEQDPTLTFRRSCREGICGSCAMNIDGGN 118
Query: 151 ------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYL 204
I N V I+PLPHMYV++DLVPDMNNFY QY SI+PWL +K N ++L
Sbjct: 119 TLACLSPIKKNKDVISIHPLPHMYVIRDLVPDMNNFYDQYTSIKPWLHSEKPRDVNHEHL 178
Query: 205 QSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRL 264
QS++DRKKLDG+YECILCACCSTSCPSYWWN +KYLGPAVLMQA+RWI DSRD+KT +RL
Sbjct: 179 QSVEDRKKLDGMYECILCACCSTSCPSYWWNPDKYLGPAVLMQAFRWIEDSRDDKTEERL 238
Query: 265 NQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
L D F +Y+CHTIMNCTRTCPKGLNP +AI +IK L+ +
Sbjct: 239 RALDDSFKLYKCHTIMNCTRTCPKGLNPAQAIGKIKTRLASM 280
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 94/149 (63%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+E DPTLTFRRSCREGICGSCAMNI G NTLAC+S I N V I+PLP
Sbjct: 80 MILDALIKIKSEQDPTLTFRRSCREGICGSCAMNIDGGNTLACLSPIKKNKDVISIHPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNIRSFQ------------ 105
HMYV++DLVPDMNNFY QY SI+ PW + + ++++S +
Sbjct: 140 HMYVIRDLVPDMNNFYDQYTSIK-----PWLHSEKPRDVNHEHLQSVEDRKKLDGMYECI 194
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WNPDK
Sbjct: 195 LCACCSTSCPS-----------YWWNPDK 212
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 35/49 (71%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A L I N V I+PLPHMYV++DLVPDMNNFY QY SI+PWL
Sbjct: 117 GNTLACLSPIKKNKDVISIHPLPHMYVIRDLVPDMNNFYDQYTSIKPWL 165
>gi|238650511|ref|YP_002916363.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia peacockii
str. Rustic]
gi|238624609|gb|ACR47315.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia peacockii
str. Rustic]
Length = 261
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 106/145 (73%), Positives = 127/145 (87%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL+ D N++ LQS+ DR+KLDGLYEC
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG+KYLGPA+L+QAYRWI DSRD+ T +RL L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
MNCT+TCPKGLNP +AI +IK L++
Sbjct: 232 MNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|229586280|ref|YP_002844781.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia africae
ESF-5]
gi|228021330|gb|ACP53038.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia africae
ESF-5]
Length = 261
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 106/145 (73%), Positives = 127/145 (87%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL+ D N++ LQS+ DR+KLDGLYEC
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG+KYLGPA+L+QAYRWI DSRD+ T +RL L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
MNCT+TCPKGLNP +AI +IK L++
Sbjct: 232 MNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKN++D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNDIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|418518769|ref|ZP_13084904.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410702463|gb|EKQ60968.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 260
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 149/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D KP Y++DL+ N+ID +
Sbjct: 19 PAKGAKNTRTFKVYRWDPDV-DAKPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|325920384|ref|ZP_08182315.1| succinate dehydrogenase subunit B [Xanthomonas gardneri ATCC 19865]
gi|325549131|gb|EGD20054.1| succinate dehydrogenase subunit B [Xanthomonas gardneri ATCC 19865]
Length = 260
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 150/238 (63%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------- 153
PA+ +TF +YRW+PD D P Y++DL+ N+ID
Sbjct: 19 PAQGAKNTRTFKVYRWDPDG-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 154 ------------------------ANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYK 185
A D K IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIDACGKAEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC IDA K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIDACGKAEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHK-IDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K IDA K IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIDACGKAEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|440733132|ref|ZP_20912904.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas
translucens DAR61454]
gi|440364324|gb|ELQ01457.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas
translucens DAR61454]
Length = 260
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 146/238 (61%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA +TF +YRWNPD D P Y+VDL+ N ID +
Sbjct: 19 PATGAKNARTFKVYRWNPDD-DSNPRTDTYEVDLDACGPMVLDALIKIKNDIDPTLTFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIADCGKAEVPIYPLPHMEVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI+DSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIVDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKN++DPTLTFRRSCREGICGSCAMNI G NTLAC I D IYPL
Sbjct: 57 MVLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIADCGKAEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMEVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIADCGKAEVPIYPLPHMEVIKDLVPDLTHFYAQYASIKPWI 143
>gi|379018572|ref|YP_005294806.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Hlp#2]
gi|376331152|gb|AFB28386.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Hlp#2]
Length = 261
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDG+YECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSEMLQSIKDREKLDGVYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSEMLQSIKDREKLDGVYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|433676055|ref|ZP_20508210.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|430818848|emb|CCP38473.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas
translucens pv. translucens DSM 18974]
Length = 260
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 147/238 (61%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA +TF +YRWNPD D P Y+VDL+ N+ID +
Sbjct: 19 PATGAKNARTFKVYRWNPDD-DSNPRTDTYEVDLDECGPMVLDALIKIKNEIDPTLTFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIADCGKAEVPIYPLPHMDVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI+DSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIVDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I D IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIADCGKAEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMDVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIADCGKAEVPIYPLPHMDVIKDLVPDLTHFYAQYASIKPWI 143
>gi|383312047|ref|YP_005364848.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Rickettsia
amblyommii str. GAT-30V]
gi|378930707|gb|AFC69216.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Rickettsia
amblyommii str. GAT-30V]
Length = 261
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 156/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDCTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCST CPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTFCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDCTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQ 157
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|34580973|ref|ZP_00142453.1| succinate dehydrogenase iron-sulfur protein [Rickettsia sibirica
246]
gi|28262358|gb|EAA25862.1| succinate dehydrogenase iron-sulfur protein [Rickettsia sibirica
246]
Length = 261
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S +IYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIRIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ +IYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+IYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 RIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|443895597|dbj|GAC72943.1| succinate dehydrogenase, Fe-S protein subunit [Pseudozyma
antarctica T-34]
Length = 295
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 151/231 (65%), Gaps = 48/231 (20%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
KP K F IYRWNPD P EKP +Q Y +DLN N++D +
Sbjct: 48 KPQHLKEFKIYRWNPDTPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEVDPSLTFRRSCR 107
Query: 156 -----------------------DKV--SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
DK +KIYPLPHMY+VKDLVPD+ FY QY+SI+P+
Sbjct: 108 EGICGSCAMNIDGVNTLACLCRIDKAGDTKIYPLPHMYIVKDLVPDLTQFYKQYRSIEPF 167
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
L+ + ++LQS ++R++LDGLYECILCACCSTSCPSYWWN ++YLGPAVLMQAYR
Sbjct: 168 LKSNN-TPAEGEHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYR 226
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
W+ DSRD+ +R +L++ FS+YRCHTIMNC+RTCPK LNPG+AIA+IKK
Sbjct: 227 WMADSRDDFGEERRQKLENTFSLYRCHTIMNCSRTCPKNLNPGKAIAQIKK 277
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI GVNTLAC+ +ID A D +KIYPL
Sbjct: 84 MVLDALIKIKNEVDPSLTFRRSCREGICGSCAMNIDGVNTLACLCRIDKAGD--TKIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QY+SI+ L
Sbjct: 142 PHMYIVKDLVPDLTQFYKQYRSIEPFL 168
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 4/51 (7%)
Query: 313 GLDT-AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID A D +KIYPLPHMY+VKDLVPD+ FY QY+SI+P+L
Sbjct: 120 GVNTLACLCRIDKAGD--TKIYPLPHMYIVKDLVPDLTQFYKQYRSIEPFL 168
>gi|21231573|ref|NP_637490.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66768306|ref|YP_243068.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris
pv. campestris str. 8004]
gi|188991445|ref|YP_001903455.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris
pv. campestris str. B100]
gi|384428034|ref|YP_005637393.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris
pv. raphani 756C]
gi|21113260|gb|AAM41414.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66573638|gb|AAY49048.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris
pv. campestris str. 8004]
gi|167733205|emb|CAP51403.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein
[Xanthomonas campestris pv. campestris]
gi|341937136|gb|AEL07275.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas campestris
pv. raphani 756C]
Length = 260
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAQGAKNKRTFKVYRWDPDG-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLTFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKAEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKAEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 113 IYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|325917575|ref|ZP_08179775.1| succinate dehydrogenase subunit B [Xanthomonas vesicatoria ATCC
35937]
gi|325536209|gb|EGD08005.1| succinate dehydrogenase subunit B [Xanthomonas vesicatoria ATCC
35937]
Length = 260
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 150/238 (63%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------- 153
PA+ +TF +YRW+PD D P Y++DL+ N+ID
Sbjct: 19 PAQGAKNTRTFKVYRWDPDG-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 154 ------------------------ANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYK 185
A D K IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIDACGKSEVPIYPLPHMDVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC IDA K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIDACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMDVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHK-IDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K IDA K IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIDACGKSEVPIYPLPHMDVIKDLVPDLTHFYAQYASIKPWI 143
>gi|190573779|ref|YP_001971624.1| succinate dehydrogenase iron-sulfur subunit [Stenotrophomonas
maltophilia K279a]
gi|194365316|ref|YP_002027926.1| succinate dehydrogenase iron-sulfur subunit [Stenotrophomonas
maltophilia R551-3]
gi|254522072|ref|ZP_05134127.1| succinate dehydrogenase, iron-sulfur protein [Stenotrophomonas sp.
SKA14]
gi|344206999|ref|YP_004792140.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Stenotrophomonas maltophilia JV3]
gi|386718130|ref|YP_006184456.1| succinate dehydrogenase iron-sulfur protein [Stenotrophomonas
maltophilia D457]
gi|408823918|ref|ZP_11208808.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas geniculata
N1]
gi|424668197|ref|ZP_18105222.1| succinate dehydrogenase iron-sulfur subunit [Stenotrophomonas
maltophilia Ab55555]
gi|190011701|emb|CAQ45320.1| putative succinate dehydrogenase iron-sulfur protein
[Stenotrophomonas maltophilia K279a]
gi|194348120|gb|ACF51243.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Stenotrophomonas maltophilia R551-3]
gi|219719663|gb|EED38188.1| succinate dehydrogenase, iron-sulfur protein [Stenotrophomonas sp.
SKA14]
gi|343778361|gb|AEM50914.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Stenotrophomonas maltophilia JV3]
gi|384077692|emb|CCH12281.1| Succinate dehydrogenase iron-sulfur protein [Stenotrophomonas
maltophilia D457]
gi|401068459|gb|EJP76983.1| succinate dehydrogenase iron-sulfur subunit [Stenotrophomonas
maltophilia Ab55555]
gi|456734184|gb|EMF59006.1| Succinate dehydrogenase iron-sulfur protein [Stenotrophomonas
maltophilia EPM1]
Length = 261
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 145/230 (63%), Gaps = 50/230 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID--------------- 153
+TF IYRW+PD D P Y+VDL+ N+ID
Sbjct: 28 RTFKIYRWSPDD-DSNPRTDTYEVDLDACGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 154 --------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
K IYPLPHM VVKDLVPD+ +FYAQY SI+PW++
Sbjct: 87 SCAMNIDGTNTLACTRAISDCGKKEVPIYPLPHMNVVKDLVPDLTHFYAQYASIKPWIRT 146
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L+QAYRWII
Sbjct: 147 QTPAPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAILLQAYRWII 206
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 207 DSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 256
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I D K IYPL
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTRAISDCGKKEVPIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 118 PHMNVVKDLVPDLTHFYAQYASIK-----PW 143
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A + D K IYPLPHM VVKDLVPD+ +FYAQY SI+PW+
Sbjct: 94 GTNTLACTRAISDCGKKEVPIYPLPHMNVVKDLVPDLTHFYAQYASIKPWI 144
>gi|383316900|ref|YP_005377742.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Frateuria aurantia DSM 6220]
gi|379044004|gb|AFC86060.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Frateuria aurantia DSM 6220]
Length = 261
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 149/237 (62%), Gaps = 50/237 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A+ + +TF IYRW P+ + P + Y+VDL
Sbjct: 20 AQGAKQPRTFRIYRWTPED-GKNPRIDTYEVDLATCGPMVLDALLKIKNEIDPTLSLRRS 78
Query: 151 -----------KIDANDKVS-------------KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
ID + ++ KIYPLPHM VVKDLVPD+ +FYAQ+ S
Sbjct: 79 CREGICGSCAMNIDGTNTLACTKAIGECGSGDVKIYPLPHMPVVKDLVPDLTHFYAQFSS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL+ + + LQS DDRKKLDGLYECILCACCSTSCPSYWWNG++YLGPA+L+
Sbjct: 139 IKPWLRTQSPAPADKERLQSPDDRKKLDGLYECILCACCSTSCPSYWWNGDRYLGPAILL 198
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRW++DSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP +AIAEIKKL+
Sbjct: 199 QAYRWVVDSRDEDTGSRLDDLEDPFKLYRCHTIMNCARTCPKGLNPAKAIAEIKKLI 255
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDAL+KIKNE+DPTL+ RRSCREGICGSCAMNI G NTLAC I + KIYPL
Sbjct: 57 MVLDALLKIKNEIDPTLSLRRSCREGICGSCAMNIDGTNTLACTKAIGECGSGDVKIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ +FYAQ+ SI+ PW
Sbjct: 117 PHMPVVKDLVPDLTHFYAQFSSIK-----PW 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T A+ + + D KIYPLPHM VVKDLVPD+ +FYAQ+ SI+PWL
Sbjct: 100 TKAIGECGSGD--VKIYPLPHMPVVKDLVPDLTHFYAQFSSIKPWL 143
>gi|15603923|ref|NP_220438.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Madrid E]
gi|383486899|ref|YP_005404579.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. GvV257]
gi|383487473|ref|YP_005405152.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Chernikova]
gi|383488319|ref|YP_005405997.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Katsinyian]
gi|383489163|ref|YP_005406840.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Dachau]
gi|383499297|ref|YP_005412658.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. BuV67-CWPP]
gi|383500138|ref|YP_005413498.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. RpGvF24]
gi|386081876|ref|YP_005998453.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia prowazekii
str. Rp22]
gi|6919864|sp|Q9ZEA1.1|DHSB_RICPR RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|3860614|emb|CAA14515.1| SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN (sdhB) [Rickettsia
prowazekii str. Madrid E]
gi|292571640|gb|ADE29555.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia prowazekii
str. Rp22]
gi|380757264|gb|AFE52501.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. GvV257]
gi|380757835|gb|AFE53071.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. RpGvF24]
gi|380760352|gb|AFE48874.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Chernikova]
gi|380761198|gb|AFE49719.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Katsinyian]
gi|380762043|gb|AFE50563.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. BuV67-CWPP]
gi|380762886|gb|AFE51405.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia prowazekii
str. Dachau]
Length = 261
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 155/235 (65%), Gaps = 52/235 (22%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
KP K K +YR++PD DE PT+ +++DL+ N+ID+
Sbjct: 26 KPRKVK---VYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCR 81
Query: 156 -----------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+P
Sbjct: 82 EGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEP 141
Query: 190 WLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
WL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QAY
Sbjct: 142 WLKNDSPAPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAY 201
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
RWI DSRD+ T RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +K L++
Sbjct: 202 RWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKNLIA 256
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPDM++FYAQY+SI+ PW
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PW 142
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|58581930|ref|YP_200946.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv.
oryzae KACC 10331]
gi|294624872|ref|ZP_06703529.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|384419522|ref|YP_005628882.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|58426524|gb|AAW75561.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv.
oryzae KACC 10331]
gi|292600831|gb|EFF44911.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|353462435|gb|AEQ96714.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 260
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAQGAKNTRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|15837675|ref|NP_298363.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa
9a5c]
gi|9106020|gb|AAF83883.1|AE003943_14 succinate dehydrogenase iron-sulfur protein [Xylella fastidiosa
9a5c]
Length = 261
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 151/243 (62%), Gaps = 51/243 (20%)
Query: 111 SSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN 155
+ PA+ K +TF +YRWNPD D P Y++DL+ N+ID
Sbjct: 15 GTHFPAKSGTKNARTFKVYRWNPDD-DANPHTDTYEIDLDTCGPMVLDALIKIKNEIDPT 73
Query: 156 DKVSK-----------------------------------IYPLPHMYVVKDLVPDMNNF 180
+ IYPLPHM V+KDL+PD+ +F
Sbjct: 74 LTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPDLTHF 133
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
YAQY SI+PW++ + + LQS DRKKLDGLYECILCACCSTSCPSYWWNG++YL
Sbjct: 134 YAQYASIKPWMRTQTPPPPDRERLQSPGDRKKLDGLYECILCACCSTSCPSYWWNGDRYL 193
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIK
Sbjct: 194 GPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAQAIAEIK 253
Query: 301 KLL 303
KL+
Sbjct: 254 KLM 256
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK--IYP 58
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I A +S+ IYP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISAC-TISEIPIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM V+KDL+PD+ +FYAQY SI+ PW
Sbjct: 117 LPHMNVIKDLIPDLTHFYAQYASIK-----PW 143
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDDANPHT--DTYEIDLDTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKI--YPLPHMYVVKDLVPD 346
G+ G + G +T A K + +S+I YPLPHM V+KDL+PD
Sbjct: 83 GI-------------CGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPD 129
Query: 347 MNNFYAQYKSIQPWL 361
+ +FYAQY SI+PW+
Sbjct: 130 LTHFYAQYASIKPWM 144
>gi|84623842|ref|YP_451214.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188576495|ref|YP_001913424.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|50313518|gb|AAT74622.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas oryzae pv.
oryzae]
gi|84367782|dbj|BAE68940.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188520947|gb|ACD58892.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 260
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAQGAKNSRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|71730830|gb|EAO32902.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Xylella fastidiosa Ann-1]
Length = 261
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 152/243 (62%), Gaps = 51/243 (20%)
Query: 111 SSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN 155
+ +PA+ K +TF +YRWNPD D P Y++DL+ N+ID
Sbjct: 15 GTHLPAKSGTKNARTFKVYRWNPDD-DANPRTDTYEIDLDTCGPMVLDALIKIKNEIDPT 73
Query: 156 DKVSK-----------------------------------IYPLPHMYVVKDLVPDMNNF 180
+ IYPLPHM V+KDL+PD+ +F
Sbjct: 74 LTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPDLTHF 133
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
YAQY SI+PW++ + + LQS DRKKLDGLYECILCACCSTSCPSYWWNG++YL
Sbjct: 134 YAQYASIKPWIRTQTPPPPDRERLQSPVDRKKLDGLYECILCACCSTSCPSYWWNGDRYL 193
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIK
Sbjct: 194 GPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAQAIAEIK 253
Query: 301 KLL 303
KL+
Sbjct: 254 KLM 256
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK--IYP 58
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I A +S+ IYP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISAC-TISEIPIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM V+KDL+PD+ +FYAQY SI+ PW
Sbjct: 117 LPHMNVIKDLIPDLTHFYAQYASIK-----PW 143
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDDANPRT--DTYEIDLDTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKI--YPLPHMYVVKDLVPD 346
G+ G + G +T A K + +S+I YPLPHM V+KDL+PD
Sbjct: 83 GI-------------CGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPD 129
Query: 347 MNNFYAQYKSIQPWL 361
+ +FYAQY SI+PW+
Sbjct: 130 LTHFYAQYASIKPWI 144
>gi|294665035|ref|ZP_06730342.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292605192|gb|EFF48536.1| succinate dehydrogenase catalytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 260
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 147/238 (61%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAQGAKNTRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW+ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWISTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|165932630|ref|YP_001649419.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Iowa]
gi|379017240|ref|YP_005293474.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Hino]
gi|165907717|gb|ABY72013.1| succinate dehydrogenase iron-sulfur protein [Rickettsia rickettsii
str. Iowa]
gi|376329805|gb|AFB27041.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Hino]
Length = 261
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDG+YECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPIPSNSERLQSIKDREKLDGVYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPDM++FYAQY+SI+ PW
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PW 142
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|418523221|ref|ZP_13089243.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB2388]
gi|410700183|gb|EKQ58751.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. malvacearum str. GSPB2388]
Length = 259
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 150/238 (63%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D KP Y++DL+ N+ID +
Sbjct: 19 PAKGAKNTRTFKVYRWDPDV-DAKPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW+ R + + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWI-RTQTPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 197 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 254
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|21242817|ref|NP_642399.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. citri str. 306]
gi|325928373|ref|ZP_08189568.1| succinate dehydrogenase subunit B [Xanthomonas perforans 91-118]
gi|346725082|ref|YP_004851751.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|381169956|ref|ZP_09879117.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|21108303|gb|AAM36935.1| succinate dehydrogenase iron-sulfur protein [Xanthomonas axonopodis
pv. citri str. 306]
gi|50981398|gb|AAT91477.1| succinate dehydrogenase subunit B [Xanthomonas citri]
gi|325541249|gb|EGD12796.1| succinate dehydrogenase subunit B [Xanthomonas perforans 91-118]
gi|346649829|gb|AEO42453.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|380689479|emb|CCG35604.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 260
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAKGAKNTRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|78047801|ref|YP_363976.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78036231|emb|CAJ23922.1| putative succinate dehydrogenase iron-sulfur protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 260
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAKGAKNTRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNINGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNINGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|157827942|ref|YP_001494184.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|378720741|ref|YP_005285628.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Colombia]
gi|378722092|ref|YP_005286978.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Arizona]
gi|378723451|ref|YP_005288335.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Hauke]
gi|379016997|ref|YP_005293232.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Brazil]
gi|157800423|gb|ABV75676.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|376325521|gb|AFB22761.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Brazil]
gi|376325765|gb|AFB23004.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Colombia]
gi|376327116|gb|AFB24354.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Arizona]
gi|376332466|gb|AFB29699.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia rickettsii
str. Hauke]
Length = 261
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDG+YECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPIPSNSERLQSIKDREKLDGVYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 YRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPDM++FYAQY+SI+ PW
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PW 142
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|379711810|ref|YP_005300149.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia philipii
str. 364D]
gi|376328455|gb|AFB25692.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia philipii
str. 364D]
Length = 261
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 157/236 (66%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD D+ PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDG+YECILCACCSTSCPSYWWNG+KYLGPA+L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGVYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+RWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 201 HRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGVYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|28198270|ref|NP_778584.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa
Temecula1]
gi|182680907|ref|YP_001829067.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa
M23]
gi|386084428|ref|YP_006000710.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|417558378|ref|ZP_12209357.1| Succinate dehydrogenase/fumarate reductase Fe-S protein [Xylella
fastidiosa EB92.1]
gi|28056340|gb|AAO28233.1| succinate dehydrogenase iron-sulfur protein [Xylella fastidiosa
Temecula1]
gi|182631017|gb|ACB91793.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Xylella fastidiosa M23]
gi|307579375|gb|ADN63344.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|338178995|gb|EGO81962.1| Succinate dehydrogenase/fumarate reductase Fe-S protein [Xylella
fastidiosa EB92.1]
Length = 261
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 151/243 (62%), Gaps = 51/243 (20%)
Query: 111 SSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN 155
+ PA+ K +TF +YRWNPD D P Y++DL+ N+ID
Sbjct: 15 GTHFPAKSGTKNARTFKVYRWNPDD-DANPRTDTYEIDLDTCGPMVLDALIKIKNEIDPT 73
Query: 156 DKVSK-----------------------------------IYPLPHMYVVKDLVPDMNNF 180
+ IYPLPHM V+KDL+PD+ +F
Sbjct: 74 LTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPDLTHF 133
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
YAQY SI+PW++ + + LQS DRKKLDGLYECILCACCSTSCPSYWWNG++YL
Sbjct: 134 YAQYASIKPWIRTQTPPPPDRERLQSPVDRKKLDGLYECILCACCSTSCPSYWWNGDRYL 193
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNCTRTCPKGLNP +AIAEIK
Sbjct: 194 GPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAQAIAEIK 253
Query: 301 KLL 303
KL+
Sbjct: 254 KLM 256
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK--IYP 58
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I A +S+ IYP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISAC-TISEIPIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM V+KDL+PD+ +FYAQY SI+ PW
Sbjct: 117 LPHMNVIKDLIPDLTHFYAQYASIK-----PW 143
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDDANPRT--DTYEIDLDTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKI--YPLPHMYVVKDLVPD 346
G+ G + G +T A K + +S+I YPLPHM V+KDL+PD
Sbjct: 83 GI-------------CGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPD 129
Query: 347 MNNFYAQYKSIQPWL 361
+ +FYAQY SI+PW+
Sbjct: 130 LTHFYAQYASIKPWI 144
>gi|67458528|ref|YP_246152.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia felis
URRWXCal2]
gi|75537005|sp|Q4UN71.1|DHSB_RICFE RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|67004061|gb|AAY60987.1| Succinate dehydrogenase iron-sulfur protein [Rickettsia felis
URRWXCal2]
Length = 261
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 156/235 (66%), Gaps = 52/235 (22%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
KP K K IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 26 KPRKVK---IYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCR 81
Query: 156 -----------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
+++S KIYPLPHM VVKDLVPDM++FYAQY+SI+P
Sbjct: 82 EGICGSCSMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEP 141
Query: 190 WLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
WL+ D N++ LQS+ R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QAY
Sbjct: 142 WLKTDSPTPSNSERLQSIKGREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAY 201
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
RWI DSRD+ T +RL L+DP +YRCHTIMNCT+TCPKGLNP +AI +IK L++
Sbjct: 202 RWIADSRDDHTGERLEDLEDPSKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSC+MNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCSMNIDGTNTLACIKPIEEISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKGREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|71275600|ref|ZP_00651885.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Xylella fastidiosa Dixon]
gi|170729592|ref|YP_001775025.1| succinate dehydrogenase iron-sulfur subunit [Xylella fastidiosa
M12]
gi|71163491|gb|EAO13208.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Xylella fastidiosa Dixon]
gi|71730717|gb|EAO32791.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Xylella fastidiosa Ann-1]
gi|167964385|gb|ACA11395.1| Succinate dehydrogenase (ubiquinone) [Xylella fastidiosa M12]
Length = 261
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 150/243 (61%), Gaps = 51/243 (20%)
Query: 111 SSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN 155
+ PA+ K +TF +YRWNPD D P Y++DL+ N+ID
Sbjct: 15 GTHFPAKSGTKNARTFKVYRWNPDD-DANPRTDTYEIDLDTCGPMVLDALIKIKNEIDPT 73
Query: 156 DKVSK-----------------------------------IYPLPHMYVVKDLVPDMNNF 180
+ IYPLPHM V+KDL+PD+ +F
Sbjct: 74 LTFRRSCREGICGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPDLTHF 133
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
YAQY SI+PW++ + + LQS DRKKLDGLYECILCACCSTSCPSYWWNG++YL
Sbjct: 134 YAQYASIKPWMRTQTPPPPDRERLQSPVDRKKLDGLYECILCACCSTSCPSYWWNGDRYL 193
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNCTRTCPKGLNP AIAEIK
Sbjct: 194 GPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCTRTCPKGLNPAHAIAEIK 253
Query: 301 KLL 303
KL+
Sbjct: 254 KLM 256
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK--IYP 58
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I A +S+ IYP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKAISAC-TISEIPIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM V+KDL+PD+ +FYAQY SI+ PW
Sbjct: 117 LPHMNVIKDLIPDLTHFYAQYASIK-----PW 143
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDDANPRT--DTYEIDLDTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKI--YPLPHMYVVKDLVPD 346
G+ G + G +T A K + +S+I YPLPHM V+KDL+PD
Sbjct: 83 GI-------------CGSCAMNIDGTNTLACTKAISACTISEIPIYPLPHMNVIKDLIPD 129
Query: 347 MNNFYAQYKSIQPWL 361
+ +FYAQY SI+PW+
Sbjct: 130 LTHFYAQYASIKPWM 144
>gi|157825197|ref|YP_001492917.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia akari str.
Hartford]
gi|157799155|gb|ABV74409.1| succinate dehydrogenase catalytic subunit [Rickettsia akari str.
Hartford]
Length = 261
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 155/235 (65%), Gaps = 52/235 (22%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN-------- 155
KP K K IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 26 KPRKVK---IYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLAFRRSCR 81
Query: 156 -----------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+P
Sbjct: 82 EGICGSCSMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEP 141
Query: 190 WLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
WL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWN +KYLGPA+L+QAY
Sbjct: 142 WLKTDSHTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNSDKYLGPAILLQAY 201
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
RWI DSRD+ T +RL L+DPF +YRCHTIMNCT+TCPK LNP +AI +IK L++
Sbjct: 202 RWIADSRDDNTCERLEALEDPFKLYRCHTIMNCTKTCPKSLNPAKAIGKIKNLIA 256
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 88/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TL FRRSCREGICGSC+MNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLAFRRSCREGICGSCSMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSHTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNSDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|389879133|ref|YP_006372698.1| succinate dehydrogenase iron-sulfur subunit [Tistrella mobilis
KA081020-065]
gi|388529917|gb|AFK55114.1| succinate dehydrogenase iron-sulfur subunit [Tistrella mobilis
KA081020-065]
Length = 257
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 151/236 (63%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A+ K F IYRWNPD E P++ Y+VDL++
Sbjct: 20 ADGAKNVKVFKIYRWNPDS-GETPSVDTYEVDLDHCGPMVLDALIKIKNEVDPTLTFRRS 78
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ KIYPLPHM VVKDLVPDM+NFYAQY SI
Sbjct: 79 CREGICGSCAMNIDGGNTLACLKPIEDVNGEVKIYPLPHMQVVKDLVPDMSNFYAQYASI 138
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWL R + + LQS ++R++LDGLYECILCACCSTSCPSYWWN ++YLGPA+L+Q
Sbjct: 139 KPWL-RSQSPAPARERLQSPEEREQLDGLYECILCACCSTSCPSYWWNSDRYLGPAILLQ 197
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRW+ DSRDE T DRL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 198 AYRWLADSRDEDTGDRLDTLEDPFRLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 253
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ + KIYPLP
Sbjct: 57 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGGNTLACLKPIEDVNGEVKIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPDM+NFYAQY SI+ PW
Sbjct: 117 HMQVVKDLVPDMSNFYAQYASIK-----PW 141
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 63/133 (47%), Gaps = 25/133 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P+V Y +D D L ++K DP +R +C
Sbjct: 32 YRWNPDSGETPSV--DTYEVDLDHCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAM 89
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
++ G +A +K + D N +V KIYPLPHM VVKDLVPDM+
Sbjct: 90 NIDGGNTLACLKPIE-------------------DVNGEV-KIYPLPHMQVVKDLVPDMS 129
Query: 349 NFYAQYKSIQPWL 361
NFYAQY SI+PWL
Sbjct: 130 NFYAQYASIKPWL 142
>gi|353327939|ref|ZP_08970266.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont
wVitB of Nasonia vitripennis]
Length = 262
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 105/144 (72%), Positives = 124/144 (86%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMY+VKDLVPD++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWLQTDKSALQNKEYFQSPEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWNG+K+LGPAVL+QAYRWI DSRD K +RL L DPF +YRCHTI
Sbjct: 173 ILCACCSTGCPSYWWNGDKFLGPAVLLQAYRWIADSRDNKKEERLASLNDPFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP +AIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPAKAIAKVKQLM 256
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 84/149 (56%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDVLIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKSIHDIKGEVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HMY+VKDLVPD++ FY QYKSI+ PW +N FQ
Sbjct: 119 HMYIVKDLVPDLSQFYEQYKSIK-----PWLQTDKSALQNKEYFQSPEDRKKLDGLSDCI 173
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S+ P+ Y WN DK
Sbjct: 174 LCACCSTGCPS-----------YWWNGDK 191
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I KIYPLPHMY+VKDLVPD++ FY QYKSI+PWL
Sbjct: 102 TKSIHDIKGE---VKIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWL 144
>gi|222825042|dbj|BAH22200.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Cadra cautella]
Length = 262
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 124/144 (86%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMY+VKDLVPD++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWLQTDKSALQNKEYFQSPEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWNG+K+LGPA+L+QAYRWI DSRD K +RL L DPF +YRCHTI
Sbjct: 173 ILCACCSTGCPSYWWNGDKFLGPAILLQAYRWIADSRDNKKEERLASLNDPFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP +AIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPAKAIAKVKQLM 256
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 85/149 (57%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKSIHDIKGEVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HMY+VKDLVPD++ FY QYKSI+ PW +N FQ
Sbjct: 119 HMYIVKDLVPDLSQFYEQYKSIK-----PWLQTDKSALQNKEYFQSPEDRKKLDGLSDCI 173
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S+ P+ Y WN DK
Sbjct: 174 LCACCSTGCPS-----------YWWNGDK 191
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I KIYPLPHMY+VKDLVPD++ FY QYKSI+PWL
Sbjct: 102 TKSIHDIKGE---VKIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWL 144
>gi|190570992|ref|YP_001975350.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont
of Culex quinquefasciatus Pel]
gi|213019509|ref|ZP_03335315.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190357264|emb|CAQ54688.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212994931|gb|EEB55573.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 262
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 124/144 (86%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMY+VKDLVPD++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWLQTDKSALQNKEYFQSPEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWNG+K+LGPA+L+QAYRWI DSRD K +RL L DPF +YRCHTI
Sbjct: 173 ILCACCSTGCPSYWWNGDKFLGPAILLQAYRWIADSRDNKKEERLASLNDPFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP +AIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPAKAIAKVKQLM 256
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 84/149 (56%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDVLIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKSIHDIKGEVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HMY+VKDLVPD++ FY QYKSI+ PW +N FQ
Sbjct: 119 HMYIVKDLVPDLSQFYEQYKSIK-----PWLQTDKSALQNKEYFQSPEDRKKLDGLSDCI 173
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S+ P+ Y WN DK
Sbjct: 174 LCACCSTGCPS-----------YWWNGDK 191
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I KIYPLPHMY+VKDLVPD++ FY QYKSI+PWL
Sbjct: 102 TKSIHDIKGE---VKIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWL 144
>gi|373450709|ref|ZP_09542679.1| succinate dehydrogenase, Fe-S protein [Wolbachia pipientis wAlbB]
gi|371932087|emb|CCE77691.1| succinate dehydrogenase, Fe-S protein [Wolbachia pipientis wAlbB]
Length = 262
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 124/144 (86%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMY+VKDLVPD++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWLQTDKSALQNKEYFQSPEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWNG+K+LGPA+L+QAYRWI DSRD K +RL L DPF +YRCHTI
Sbjct: 173 ILCACCSTGCPSYWWNGDKFLGPAILLQAYRWIADSRDNKKEERLASLNDPFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP +AIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPAKAIAKVKQLM 256
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 85/149 (57%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKSIHDIKGEVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HMY+VKDLVPD++ FY QYKSI+ PW +N FQ
Sbjct: 119 HMYIVKDLVPDLSQFYEQYKSIK-----PWLQTDKSALQNKEYFQSPEDRKKLDGLSDCI 173
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S+ P+ Y WN DK
Sbjct: 174 LCACCSTGCPS-----------YWWNGDK 191
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I KIYPLPHMY+VKDLVPD++ FY QYKSI+PWL
Sbjct: 102 TKSIHDIKGE---VKIYPLPHMYIVKDLVPDLSQFYEQYKSIKPWL 144
>gi|340711233|ref|XP_003394183.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Bombus terrestris]
Length = 340
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 157/250 (62%), Gaps = 51/250 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------------------- 149
EKP + +T +YRWNP+KP+ KP MQ++ VDLN
Sbjct: 75 EKP-RLQTVRVYRWNPEKPNVKPFMQQFSVDLNKCGTMVLDVLALIKAEHDPTLSYRRSC 133
Query: 150 ---------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K+ + K IYPLPH YV++DLV DM F QY+ I+
Sbjct: 134 REGICGSCSMNINGVNTLACITKVKESPKPIVIYPLPHSYVIRDLVTDMEQFLKQYQHIE 193
Query: 189 PWLQRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
P+L+R E+ +G Q LQS DR KL+GLYECILC CC+ SCP YWW G+K+LGPA L+
Sbjct: 194 PFLKRPGEDNFLGLRQILQSPKDRDKLNGLYECILCGCCTYSCPPYWWLGDKFLGPATLL 253
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
QAYRWIIDSRD +RL++L+D +SVYRCHTI NCT+TCPK LNPG+AIA+IK+LL+GL
Sbjct: 254 QAYRWIIDSRDMGHKERLSKLRDFYSVYRCHTIFNCTKTCPKALNPGKAIAQIKRLLAGL 313
Query: 307 VKKDKPGLDT 316
KK++P ++T
Sbjct: 314 TKKERPDMET 323
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK E DPTL++RRSCREGICGSC+MNI GVNTLACI+K+ + K IYPLP
Sbjct: 111 MVLDVLALIKAEHDPTLSYRRSCREGICGSCSMNINGVNTLACITKVKESPKPIVIYPLP 170
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
H YV++DLV DM F QY+ I+ L P
Sbjct: 171 HSYVIRDLVTDMEQFLKQYQHIEPFLKRP 199
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 30/138 (21%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN EK P V MQ + ++ D L +K DP YR R+C
Sbjct: 85 YRWNPEK---PNVKPFMQQFSVDLNKCGTMVLDVLALIKAEHDPTLSYR--------RSC 133
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVP 345
+G+ G + G++T A + K+ + K IYPLPH YV++DLV
Sbjct: 134 REGI-------------CGSCSMNINGVNTLACITKVKESPKPIVIYPLPHSYVIRDLVT 180
Query: 346 DMNNFYAQYKSIQPWLPR 363
DM F QY+ I+P+L R
Sbjct: 181 DMEQFLKQYQHIEPFLKR 198
>gi|239946945|ref|ZP_04698698.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921221|gb|EER21245.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 261
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 154/236 (65%), Gaps = 49/236 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E+ K + IYR++PD DE PT+ +++DL+ N+ID+
Sbjct: 22 EEMLKPRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM VVKDLVPDM++FYAQY+SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D N++ LQS+ DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGP +L+QA
Sbjct: 141 PWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPMILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
YRWI DSRD+ +RL L+DPF +YRCHTIMNCT+TCPKGLNP + I +IK L++
Sbjct: 201 YRWIADSRDDHNGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKVIGKIKSLIA 256
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM++FYAQY+SI+ PW + T N Q
Sbjct: 118 HMKVVKDLVPDMSHFYAQYESIE-----PWLKTDSPTPSNSERLQSIKDREKLDGLYECI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 173 LCACCSTSCPS-----------YWWNGDK 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FYAQY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYAQYESIEPWL 143
>gi|350411889|ref|XP_003489481.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Bombus impatiens]
Length = 316
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 157/250 (62%), Gaps = 51/250 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------------------- 149
EKP + +T +YRWNP+KP+ KP MQ++ VDLN
Sbjct: 51 EKP-RLQTVRVYRWNPEKPNVKPFMQQFSVDLNKCGTMVLDVLALIKAEHDPTLSYRRSC 109
Query: 150 ---------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K+ + K IYPLPH YV++DLV DM F QY+ I+
Sbjct: 110 REGICGSCSMNINGVNTLACITKVKESPKPIVIYPLPHSYVIRDLVTDMEQFLKQYQHIE 169
Query: 189 PWLQRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
P+L+R E+ +G Q LQS DR KL+GLYECILC CC+ SCP YWW G+K+LGPA L+
Sbjct: 170 PFLKRPGEDNFLGLRQILQSPKDRDKLNGLYECILCGCCTYSCPPYWWLGDKFLGPATLL 229
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
QAYRWIIDSRD +RL++L+D +SVYRCHTI NCT+TCPK LNPG+AIA+IK+LL+GL
Sbjct: 230 QAYRWIIDSRDMGHKERLSKLRDFYSVYRCHTIFNCTKTCPKALNPGKAIAQIKRLLAGL 289
Query: 307 VKKDKPGLDT 316
KK++P ++T
Sbjct: 290 TKKERPDMET 299
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK E DPTL++RRSCREGICGSC+MNI GVNTLACI+K+ + K IYPLP
Sbjct: 87 MVLDVLALIKAEHDPTLSYRRSCREGICGSCSMNINGVNTLACITKVKESPKPIVIYPLP 146
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
H YV++DLV DM F QY+ I+ L P
Sbjct: 147 HSYVIRDLVTDMEQFLKQYQHIEPFLKRP 175
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 30/138 (21%)
Query: 232 YWWNGEKYLGPAV--LMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTC 286
Y WN EK P V MQ + ++ D L +K DP YR R+C
Sbjct: 61 YRWNPEK---PNVKPFMQQFSVDLNKCGTMVLDVLALIKAEHDPTLSYR--------RSC 109
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVP 345
+G+ G + G++T A + K+ + K IYPLPH YV++DLV
Sbjct: 110 REGI-------------CGSCSMNINGVNTLACITKVKESPKPIVIYPLPHSYVIRDLVT 156
Query: 346 DMNNFYAQYKSIQPWLPR 363
DM F QY+ I+P+L R
Sbjct: 157 DMEQFLKQYQHIEPFLKR 174
>gi|89573805|gb|ABD77128.1| succinate dehydrogenase complex subunit B [Monodelphis domestica]
Length = 206
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 142/206 (68%), Gaps = 50/206 (24%)
Query: 134 KPDEKPTMQEYKVDLN-------------------------------------------- 149
KP EKP MQ Y++DLN
Sbjct: 1 KPGEKPRMQTYEIDLNKCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNT 60
Query: 150 ----NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQY 203
+ID N +KVSKIYPLPHMYV+KDL+PD+ NFYAQYKSI+P+L++ D+ G QY
Sbjct: 61 LACTRRIDPNLNKVSKIYPLPHMYVMKDLIPDLTNFYAQYKSIEPYLKKKDESQGGKQQY 120
Query: 204 LQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADR 263
+QS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +R
Sbjct: 121 IQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEER 180
Query: 264 LNQLKDPFSVYRCHTIMNCTRTCPKG 289
L QL+DPFS+YRCHTIMNCTRTCPKG
Sbjct: 181 LAQLQDPFSLYRCHTIMNCTRTCPKG 206
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 98/146 (67%), Gaps = 23/146 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 21 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDPNLNKVSKIYPL 80
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDL+PD+ NFYAQYKSI+ +L GG + + ++ + + L A
Sbjct: 81 PHMYVMKDLIPDLTNFYAQYKSIEPYLKKKDESQGGKQQYIQSIEDREKLDGLYECILCA 140
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDK 134
S++ P+ Y WN DK
Sbjct: 141 CCSTSCPS-----------YWWNGDK 155
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDL+PD+ NFYAQYKSI+P+L +
Sbjct: 58 GNTLACTRRIDPNLNKVSKIYPLPHMYVMKDLIPDLTNFYAQYKSIEPYLKK 109
>gi|51701403|sp|Q70KF8.1|DHSB_UROFA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|40644750|emb|CAE02642.1| succinate dehydrogenase [Uromyces viciae-fabae]
Length = 283
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 154/244 (63%), Gaps = 56/244 (22%)
Query: 111 SSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDA-- 154
SSAVP K F+IYRWNPD+P +KPT+Q Y +DL N++D
Sbjct: 46 SSAVPV------KEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTL 99
Query: 155 ------------------------------NDKVS---KIYPLPHMYVVKDLVPDMNNFY 181
N + S KIYPLPHMY++KDLVPDM +FY
Sbjct: 100 TFRRSCREGICGSCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFY 159
Query: 182 AQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLG 241
QYKSI+P+L+ D ++LQS +DRKKLDG+YECILCACCSTSCPSYWWN ++YLG
Sbjct: 160 KQYKSIEPFLKNDNPP-AQGEFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLG 218
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PAVLMQAYRW+ DSRD DR +L++ S+YRCHTI NCT+TCPKGLNP +AI+ IK+
Sbjct: 219 PAVLMQAYRWMADSRDSYGEDRKEKLQNTLSLYRCHTIFNCTKTCPKGLNPAKAISHIKR 278
Query: 302 LLSG 305
++
Sbjct: 279 EMAS 282
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I+ KIYPL
Sbjct: 83 MVLDALIKIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRINKETSAPVKIYPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY++KDLVPDM +FY QYKSI+ L
Sbjct: 143 PHMYIIKDLVPDMTHFYKQYKSIEPFL 169
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I+ KIYPLPHMY++KDLVPDM +FY QYKSI+P+L
Sbjct: 119 GVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQYKSIEPFL 169
>gi|390991582|ref|ZP_10261843.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|372553678|emb|CCF68818.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
Length = 259
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 149/238 (62%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAKGAKNTRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW+ R + + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWV-RTQTPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 197 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 254
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWV 143
>gi|18073243|emb|CAC80855.1| DHSB protein [Dendronephthya klunzingeri]
Length = 282
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 150/231 (64%), Gaps = 50/231 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID------------- 153
+ KTF+IYRW+P+K +KP MQ+Y+VDL+ N+ID
Sbjct: 36 RTKTFSIYRWDPEKAGDKPRMQDYEVDLDSCGPMVLDALIKIKNEIDPTLTFRRSCREGI 95
Query: 154 ----------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
A++K KIYPLPHMYV+KDLVPDM +FY QY+SI+P+L
Sbjct: 96 CGSCAMNIGGKNTLACICRIDGASNKKEKIYPLPHMYVIKDLVPDMTHFYDQYRSIKPYL 155
Query: 192 QRDKENI-GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
R + + G Q LQ+ +DR KLDGLYECILCACC+TSCPSYWW+GEKYLGPAVLMQAYR
Sbjct: 156 MRKDDMVAGKEQLLQTQEDRAKLDGLYECILCACCTTSCPSYWWHGEKYLGPAVLMQAYR 215
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
W+IDSRD +RL L + SVY CHTIMNCT TCPKGLNPG A+ + ++
Sbjct: 216 WMIDSRDHYQNERLAMLDNHHSVYPCHTIMNCTMTCPKGLNPGEAVGKSRQ 266
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 102/155 (65%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI +ID A++K KIYPL
Sbjct: 69 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGKNTLACICRIDGASNKKEKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK----NIRSFQLSA 108
PHMYV+KDLVPDM +FY QY+SI+ +L G ++L T + + L A
Sbjct: 129 PHMYVIKDLVPDMTHFYDQYRSIKPYLMRKDDMVAGKEQLLQTQEDRAKLDGLYECILCA 188
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
+++ P+ KY A+ YRW D D
Sbjct: 189 CCTTSCPSYWWHGEKYLGPAVLMQAYRWMIDSRDH 223
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ EK G MQ Y +DS D L ++K DP +R R+C +
Sbjct: 43 YRWDPEK-AGDKPRMQDYEVDLDSCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 93
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKID-ANDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + +ID A++K KIYPLPHMYV+KDLVPD
Sbjct: 94 GI-------------CGSCAMNIGGKNTLACICRIDGASNKKEKIYPLPHMYVIKDLVPD 140
Query: 347 MNNFYAQYKSIQPWLPR 363
M +FY QY+SI+P+L R
Sbjct: 141 MTHFYDQYRSIKPYLMR 157
>gi|289665886|ref|ZP_06487467.1| succinate dehydrogenase iron-sulfur subunit [Xanthomonas campestris
pv. vasculorum NCPPB 702]
Length = 260
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 147/238 (61%), Gaps = 50/238 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+ D D P Y++DL+ N+ID +
Sbjct: 19 PAQGAKNTRTFKVYRWDSDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|307209225|gb|EFN86332.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Harpegnathos saltator]
Length = 328
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 157/246 (63%), Gaps = 50/246 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ + +YRWNP+K KP +Q++ VDLN
Sbjct: 66 RLQIVRVYRWNPEKQHVKPHIQQFTVDLNKCGTMVLDVLTLIKAEHDPTLSFRRSCREGI 125
Query: 150 -----------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
K++ + K IYPLPH YV++DLVPD+ F+ Q+++I P+L+
Sbjct: 126 CGNCSMNINGVNTLACITKVEESAKPLVIYPLPHTYVIRDLVPDLRQFFDQFRAIDPYLK 185
Query: 193 RDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
R E+ +G Q LQS DRKKLDGL+ECI+CACC+ +CP YWW G+KYLGPAVL+QAYR
Sbjct: 186 RPGEDNILGVRQVLQSTRDRKKLDGLHECIMCACCTYACPPYWWLGDKYLGPAVLLQAYR 245
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
W+IDSRD +RL +L+D +S+YRCHTI NCT+TCPKGLNPG+AIA++K+LL+GL KK+
Sbjct: 246 WVIDSRDMAHKERLGKLRDFYSIYRCHTIFNCTKTCPKGLNPGKAIAQLKRLLAGLTKKE 305
Query: 311 KPGLDT 316
+P ++T
Sbjct: 306 EPDIET 311
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK E DPTL+FRRSCREGICG+C+MNI GVNTLACI+K++ + K IYPLP
Sbjct: 99 MVLDVLTLIKAEHDPTLSFRRSCREGICGNCSMNINGVNTLACITKVEESAKPLVIYPLP 158
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWK--ILGT 95
H YV++DLVPD+ F+ Q+++I +L P + ILG
Sbjct: 159 HTYVIRDLVPDLRQFFDQFRAIDPYLKRPGEDNILGV 195
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + K++ + K IYPLPH YV++DLVPD+ F+ Q+++I P+L R
Sbjct: 135 GVNTLACITKVEESAKPLVIYPLPHTYVIRDLVPDLRQFFDQFRAIDPYLKR 186
>gi|357406015|ref|YP_004917939.1| succinate dehydrogenase [Methylomicrobium alcaliphilum 20Z]
gi|351718680|emb|CCE24354.1| succinate dehydrogenase (ubiquinone), Fe-S protein
[Methylomicrobium alcaliphilum 20Z]
Length = 261
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 147/229 (64%), Gaps = 49/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDA-------------- 154
+ F +YRW+PD E P + Y VD+ N+ID+
Sbjct: 28 RRFEVYRWDPDS-GENPRIDAYDVDVGSCGPMVLDAIIKIKNEIDSTLTFRRSCREGVCG 86
Query: 155 ------NDKVS--------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
N K + KI+PLPHM VVKDLVPDM +FYAQY SI+PW+
Sbjct: 87 SCAMNVNGKNTLVCTKAIDEYKGTIKIFPLPHMAVVKDLVPDMTHFYAQYASIKPWMATQ 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+++ LQS +DR KLDGLYEC+LCACCSTSCPSYWWN E+YLGPA+L+QAYRW++D
Sbjct: 147 TPPPADSERLQSREDRAKLDGLYECVLCACCSTSCPSYWWNSERYLGPAILLQAYRWLVD 206
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL++L+DPF +YRCHTIMNCT TCPKGLNP +AIAE KKLL
Sbjct: 207 SRDEGTGERLDELEDPFKLYRCHTIMNCTDTCPKGLNPAKAIAETKKLL 255
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 89/158 (56%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE+D TLTFRRSCREG+CGSCAMN+ G NTL C ID KI+PLP
Sbjct: 58 MVLDAIIKIKNEIDSTLTFRRSCREGVCGSCAMNVNGKNTLVCTKAIDEYKGTIKIFPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPDM +FYAQY SI+ PW T + Q
Sbjct: 118 HMAVVKDLVPDMTHFYAQYASIK-----PWMATQTPPPADSERLQSREDRAKLDGLYECV 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ +Y AI YRW D DE
Sbjct: 173 LCACCSTSCPSYWWNSERYLGPAILLQAYRWLVDSRDE 210
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 322 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
ID KI+PLPHM VVKDLVPDM +FYAQY SI+PW+
Sbjct: 104 IDEYKGTIKIFPLPHMAVVKDLVPDMTHFYAQYASIKPWM 143
>gi|353240077|emb|CCA71962.1| related to succinate dehydrogenase [ubiquinone] iron-sulfur
protein, mitochondrial precursor [Piriformospora indica
DSM 11827]
Length = 282
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID---------- 153
KP K F IYRWNPD+P++KP++Q YKVDLN N++D
Sbjct: 46 KPPLIKEFKIYRWNPDEPEKKPSLQSYKVDLNQCGPMILDALIKIKNEMDPTLTFRRSCR 105
Query: 154 -------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
A K +KIYPLPHMYVVKDLVPD+ F+ QYKS++
Sbjct: 106 EGICGSCAMNIDGQNTLACLCRIDRAETKDTKIYPLPHMYVVKDLVPDLTLFFKQYKSVE 165
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+L+ D ++LQ+ +DRKKLDGLYECILCACCSTSCPSYWWN + YLGPA L+ +
Sbjct: 166 PYLKNDNPP-EKGEFLQTQEDRKKLDGLYECILCACCSTSCPSYWWNQDVYLGPAALLHS 224
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
YRWI DSRD A R +L++ FS+YRCHTI+NC+RTCPKGL PG AIA+IK
Sbjct: 225 YRWIADSRDSYAAQRKEKLQNTFSLYRCHTILNCSRTCPKGLEPGTAIAKIK 276
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID A K +KIYPL
Sbjct: 82 MILDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGQNTLACLCRIDRAETKDTKIYPL 141
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD+ F+ QYKS++ +L
Sbjct: 142 PHMYVVKDLVPDLTLFFKQYKSVEPYL 168
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +ID A K +KIYPLPHMYVVKDLVPD+ F+ QYKS++P+L
Sbjct: 123 ACLCRIDRAETKDTKIYPLPHMYVVKDLVPDLTLFFKQYKSVEPYL 168
>gi|254839127|gb|ACT83442.1| SdhB [Botryotinia fuckeliana]
Length = 285
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 151/244 (61%), Gaps = 52/244 (21%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 42 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 101
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 102 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 161
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 162 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWW 221
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRC+TI+NC+RTCPKGLNPG
Sbjct: 222 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCYTILNCSRTCPKGLNPGL 281
Query: 295 AIAE 298
AIAE
Sbjct: 282 AIAE 285
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 92 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 151
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 152 PHTYVVKDIVPDLTQFYKQYKSIKPYL 178
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 128 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 178
>gi|254839131|gb|ACT83444.1| SdhB [Botryotinia fuckeliana]
Length = 285
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 150/244 (61%), Gaps = 52/244 (21%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 42 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 101
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 102 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 161
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSC SYWW
Sbjct: 162 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCTSYWW 221
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHTI+NC+RTCPKGLNPG
Sbjct: 222 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGL 281
Query: 295 AIAE 298
AIAE
Sbjct: 282 AIAE 285
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 92 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 151
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 152 PHTYVVKDIVPDLTQFYKQYKSIKPYL 178
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 128 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 178
>gi|319780756|ref|YP_004140232.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166644|gb|ADV10182.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 259
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 150/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD DE P + Y VD++ NKID
Sbjct: 22 EGATNLREYRIYRWSPDD-DENPRIDTYFVDMDDCGPMVLDALLWIKNKIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D +S K+YPLPHM VVKDLVPD+ NFYAQ+ SIQ
Sbjct: 81 REGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIQ 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+QA
Sbjct: 141 PWLKTVSPEPAK-EWLQSHEDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPATLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC D K+YPLP
Sbjct: 58 MVLDALLWIKNKIDPTLTLRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ+ SIQ PW
Sbjct: 118 HMQVVKDLVPDLTNFYAQHASIQ-----PW 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K+YPLPHM VVKDLVPD+ NFYAQ+ SIQPWL
Sbjct: 94 GSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIQPWL 143
>gi|159476382|ref|XP_001696290.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase
[Chlamydomonas reinhardtii]
gi|158282515|gb|EDP08267.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase
[Chlamydomonas reinhardtii]
Length = 291
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 158/268 (58%), Gaps = 57/268 (21%)
Query: 92 ILGTLTAKNIRSFQLSAAASSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYK 145
L + S +A A+++ PA KP YK F IYRWNPD DEKP Y+
Sbjct: 21 FLSAFISTTSESLNAAATATASKPAPSRPPLAKPPLYKEFQIYRWNPDS-DEKPKYASYQ 79
Query: 146 VDLNN------------------------------------KIDANDK------------ 157
VD+NN ID ++
Sbjct: 80 VDINNCGPMMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNIDGSNTLACLCKVNRDPG 139
Query: 158 -VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
V K+ PLPHM+VVKDLV DM NFYAQYKSI+P+LQ+ KE ++ QS + R KLDGL
Sbjct: 140 HVGKVAPLPHMFVVKDLVVDMANFYAQYKSIKPYLQK-KEAAKGQEFYQSKESRAKLDGL 198
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +KYLGPAVL+ AYRWIIDSRD+ T++R+ ++ D + +YRC
Sbjct: 199 YECILCACCSTSCPSYWWNSDKYLGPAVLLAAYRWIIDSRDDMTSERMKEVDDAYKLYRC 258
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
TIMNC CPKGLNPG+AI +IK+ L+
Sbjct: 259 KTIMNCATVCPKGLNPGKAINKIKQSLA 286
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LD L+KIK+E D TL+ RRSCREGICGSCAMNI G NTLAC+ K++ + V K+ PL
Sbjct: 88 MMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNIDGSNTLACLCKVNRDPGHVGKVAPL 147
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VVKDLV DM NFYAQYKSI+ +L
Sbjct: 148 PHMFVVKDLVVDMANFYAQYKSIKPYL 174
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L K++ + V K+ PLPHM+VVKDLV DM NFYAQYKSI+P+L +
Sbjct: 129 ACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMANFYAQYKSIKPYLQK 176
>gi|319786903|ref|YP_004146378.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pseudoxanthomonas suwonensis 11-1]
gi|317465415|gb|ADV27147.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pseudoxanthomonas suwonensis 11-1]
Length = 261
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 148/239 (61%), Gaps = 51/239 (21%)
Query: 115 PAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------- 150
PA AK +TF +YRW+PD P Y++DL+
Sbjct: 19 PAPAGAKNVRTFKVYRWSPDD-GANPRTDTYELDLDKCGPMVLDALIKIKNEVDPTLTFR 77
Query: 151 -------------KIDANDKVS-------------KIYPLPHMYVVKDLVPDMNNFYAQY 184
ID + ++ IYPLPHM VVKDLVPD+ +FYAQY
Sbjct: 78 RSCREGICGSCAMNIDGTNTLACTRAIADCQKAEVPIYPLPHMSVVKDLVPDLTHFYAQY 137
Query: 185 KSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
SI+PW++ + + LQS +DRKKLDGLYECILCACCSTSCPSYWWNGE+YLGPA+
Sbjct: 138 ASIKPWIRTQTPAPPDRERLQSPEDRKKLDGLYECILCACCSTSCPSYWWNGERYLGPAI 197
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLNP AIAEIKKL+
Sbjct: 198 LLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLNPALAIAEIKKLM 256
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I D IYPL
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTRAIADCQKAEVPIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 118 PHMSVVKDLVPDLTHFYAQYASIK-----PW 143
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A + A+ + ++ IYPLPHM VVKDLVPD+ +FYAQY SI+PW+
Sbjct: 94 GTNTLACTRAIADCQKAEVPIYPLPHMSVVKDLVPDLTHFYAQYASIKPWI 144
>gi|383852286|ref|XP_003701659.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Megachile rotundata]
Length = 282
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 159/254 (62%), Gaps = 51/254 (20%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------ 149
+ EKP + +T +YRW+P+KP+ KP MQ++ VDLN
Sbjct: 14 IKKEKP-RLQTIRVYRWSPEKPNVKPHMQQFSVDLNKCGTMVLDVLTLIKAEHDPTLSFR 72
Query: 150 ------------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
K+ + K +YPLPH Y+++DL+PDM +F QY+
Sbjct: 73 RSCREGICGTCGMNINGVNTLACITKVKESSKPIIVYPLPHTYIIRDLIPDMTHFLKQYE 132
Query: 186 SIQPWLQRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
+ P+L+R E +G Q LQS DR KL+GLY+CILC CC+ +CP YWW G+K+LGPA
Sbjct: 133 EVDPFLKRPGEENFLGLRQILQSPKDRNKLNGLYDCILCGCCTYACPPYWWLGDKFLGPA 192
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRWI+DSRD +RL++L+D FSVYRCHTI NCT+TCPKGLNPG+AIA+IK+LL
Sbjct: 193 TLLQAYRWIMDSRDMGHRERLSKLRDYFSVYRCHTIFNCTKTCPKGLNPGKAIAQIKRLL 252
Query: 304 SGLVKKDKPGLDTA 317
+GL KK +P ++T+
Sbjct: 253 AGLTKKKRPEMETS 266
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK E DPTL+FRRSCREGICG+C MNI GVNTLACI+K+ + K +YPLP
Sbjct: 53 MVLDVLTLIKAEHDPTLSFRRSCREGICGTCGMNINGVNTLACITKVKESSKPIIVYPLP 112
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
H Y+++DL+PDM +F QY+ + L P
Sbjct: 113 HTYIIRDLIPDMTHFLKQYEEVDPFLKRP 141
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + K+ + K +YPLPH Y+++DL+PDM +F QY+ + P+L R
Sbjct: 89 GVNTLACITKVKESSKPIIVYPLPHTYIIRDLIPDMTHFLKQYEEVDPFLKR 140
>gi|254839129|gb|ACT83443.1| SdhB [Botryotinia fuckeliana]
Length = 282
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 150/244 (61%), Gaps = 52/244 (21%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 39 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 98
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 99 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 158
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 159 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWW 218
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRC TI+NC+RTCPKGLNPG
Sbjct: 219 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCRTILNCSRTCPKGLNPGL 278
Query: 295 AIAE 298
AIAE
Sbjct: 279 AIAE 282
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 89 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 148
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 149 PHTYVVKDIVPDLTQFYKQYKSIKPYL 175
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 125 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 175
>gi|412986508|emb|CCO14934.1| succinate dehydrogenase iron-sulfur subunit [Bathycoccus prasinos]
Length = 311
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 149/238 (62%), Gaps = 57/238 (23%)
Query: 123 KTFAIYRWNPDKP----DEKPTMQEYKVDLNN----------KI-DAND----------- 156
K F +YRW+P+ P D KP Q Y VDLN+ KI D D
Sbjct: 73 KNFDVYRWSPEAPKDSKDSKPHYQSYSVDLNDCGPMMLDVLLKIKDEQDHSLSFRRSCRE 132
Query: 157 ----------------------------KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +K+ PLPHM+VV+DLV DM+NFYAQYKSI+
Sbjct: 133 GICGSCAMNINGVNTLACLSKVEKSTAAETTKVAPLPHMFVVRDLVVDMSNFYAQYKSIK 192
Query: 189 PWLQRDKENIGNA---QYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
PWL RD E A + LQS +DR+KLDGLYECILCACCSTSCPSYWWN +KYLGPAVL
Sbjct: 193 PWLIRDDEEETKASGRENLQSKEDREKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVL 252
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWIIDSRD K DRL Q+ D F +YRCHTIMNCT+ CPKGLNP +AIA+IK ++
Sbjct: 253 LQAYRWIIDSRDWKKKDRLIQVNDAFKLYRCHTIMNCTKVCPKGLNPAKAIAKIKTMV 310
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 77/94 (81%), Gaps = 7/94 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND--KVSKIYP 58
M+LD L+KIK+E D +L+FRRSCREGICGSCAMNI GVNTLAC+SK++ + + +K+ P
Sbjct: 108 MMLDVLLKIKDEQDHSLSFRRSCREGICGSCAMNINGVNTLACLSKVEKSTAAETTKVAP 167
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
LPHM+VV+DLV DM+NFYAQYKSI+ PW I
Sbjct: 168 LPHMFVVRDLVVDMSNFYAQYKSIK-----PWLI 196
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%), Gaps = 3/54 (5%)
Query: 313 GLDT-AALHKIDAND--KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L K++ + + +K+ PLPHM+VV+DLV DM+NFYAQYKSI+PWL R
Sbjct: 144 GVNTLACLSKVEKSTAAETTKVAPLPHMFVVRDLVVDMSNFYAQYKSIKPWLIR 197
>gi|254839133|gb|ACT83445.1| SdhB [Botryotinia fuckeliana]
Length = 285
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 150/244 (61%), Gaps = 52/244 (21%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 42 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 101
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 102 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 161
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 162 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWW 221
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHTI+NC+RTCPKGLNPG
Sbjct: 222 ISEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGL 281
Query: 295 AIAE 298
AIAE
Sbjct: 282 AIAE 285
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 92 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 151
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 152 PHTYVVKDIVPDLTQFYKQYKSIKPYL 178
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 128 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 178
>gi|357025761|ref|ZP_09087874.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium amorphae
CCNWGS0123]
gi|355542359|gb|EHH11522.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium amorphae
CCNWGS0123]
Length = 259
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD DE P + Y VD++ NKID
Sbjct: 22 EGATNLREYRIYRWSPDD-DENPRIDTYFVDMDDCGPMVLDALLWIKNKIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D +S K+YPLPHM VVKDLVPD+ NFYAQ+ SI+
Sbjct: 81 REGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA L+QA
Sbjct: 141 PWLKTVSPQPAK-EWLQSHEDREKLDGLYECILCACCSTSCPSYWWNGERYLGPATLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE DRL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEAKGDRLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC D K+YPLP
Sbjct: 58 MVLDALLWIKNKIDPTLTLRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 HMQVVKDLVPDLTNFYAQHASIE-----PW 142
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K+YPLPHM VVKDLVPD+ NFYAQ+ SI+PWL
Sbjct: 94 GSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIEPWL 143
>gi|254839137|gb|ACT83447.1| SdhB [Botryotinia fuckeliana]
Length = 285
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 150/244 (61%), Gaps = 52/244 (21%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 42 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 101
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 102 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 161
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSC SYWW
Sbjct: 162 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCLSYWW 221
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHTI+NC+RTCPKGLNPG
Sbjct: 222 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHTILNCSRTCPKGLNPGL 281
Query: 295 AIAE 298
AIAE
Sbjct: 282 AIAE 285
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 92 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 151
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 152 PHTYVVKDIVPDLTQFYKQYKSIKPYL 178
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 128 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 178
>gi|265982911|ref|ZP_06095646.1| succinate dehydrogenase iron-sulfur subunit [Brucella sp. 83/13]
gi|306838920|ref|ZP_07471747.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella sp. NF 2653]
gi|264661503|gb|EEZ31764.1| succinate dehydrogenase iron-sulfur subunit [Brucella sp. 83/13]
gi|306405990|gb|EFM62242.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella sp. NF 2653]
Length = 259
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-SQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|337265584|ref|YP_004609639.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mesorhizobium opportunistum WSM2075]
gi|336025894|gb|AEH85545.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mesorhizobium opportunistum WSM2075]
Length = 259
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 150/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD DE P + Y VD++ NKID
Sbjct: 22 EGATNLREYRIYRWSPDD-DENPRIDTYFVDMDDCGPMVLDALLWIKNKIDPTLALRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D +S K+YPLPHM VVKDLVPD+ NFYAQ+ SI+
Sbjct: 81 REGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+QA
Sbjct: 141 PWLKTVSPEPAK-EWLQSHEDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPATLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTL RRSCREGICGSCAMNI G NTLAC D K+YPLP
Sbjct: 58 MVLDALLWIKNKIDPTLALRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 HMQVVKDLVPDLTNFYAQHASIE-----PW 142
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K+YPLPHM VVKDLVPD+ NFYAQ+ SI+PWL
Sbjct: 94 GSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIEPWL 143
>gi|254839135|gb|ACT83446.1| SdhB [Botryotinia fuckeliana]
Length = 285
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 150/244 (61%), Gaps = 52/244 (21%)
Query: 107 SAAASSAV---PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
SA+ +S V A+ + KTF IYRWNPD+P KP MQ Y +DLN
Sbjct: 42 SASKTSTVKEPAADSESLIKTFNIYRWNPDEPTSKPRMQSYTLDLNKTGPMMLDALIRIK 101
Query: 150 NKIDAN-------------------DKV----------------SKIYPLPHMYVVKDLV 174
N++D D V +KIYPLPH YVVKD+V
Sbjct: 102 NEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIV 161
Query: 175 PDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWW 234
PD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYECILCACCSTSCPSYWW
Sbjct: 162 PDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWW 221
Query: 235 NGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294
N E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRC TI+NC+RTCPKGLNPG
Sbjct: 222 NSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCLTILNCSRTCPKGLNPGL 281
Query: 295 AIAE 298
AIAE
Sbjct: 282 AIAE 285
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K +KIYPL
Sbjct: 92 MMLDALIRIKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPL 151
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKD+VPD+ FY QYKSI+ +L
Sbjct: 152 PHTYVVKDIVPDLTQFYKQYKSIKPYL 178
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 128 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 178
>gi|42520570|ref|NP_966485.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont
of Drosophila melanogaster]
gi|99034706|ref|ZP_01314642.1| hypothetical protein Wendoof_01000540 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410309|gb|AAS14419.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 262
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 124/144 (86%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMYV+KDLV D++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWN +K+LGPA+L+QAYRWI DSRD KT +RL+ L DPF +YRCHTI
Sbjct: 173 ILCACCSTGCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP RAIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPARAIAKVKQLM 256
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYV+KDLV D++ FY QYKSI+ PW
Sbjct: 119 HMYVIKDLVSDLSQFYEQYKSIK-----PW 143
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I + KIYPLPHMYV+KDLV D++ FY QYKSI+PWL
Sbjct: 102 TRSIHDIKGD---VKIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWL 144
>gi|73667301|ref|YP_303317.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia canis str.
Jake]
gi|72394442|gb|AAZ68719.1| succinate dehydrogenase subunit B [Ehrlichia canis str. Jake]
Length = 258
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------- 150
E K F IYRW+PD DE P + + +DL+
Sbjct: 23 ENAKNVKCFKIYRWSPDD-DENPRIDTFFIDLDECGQMVLDALIKIKNEVDSTLTFRRSC 81
Query: 151 ----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
ID + ++ KIYPLPHMYV+KDLVPD++NFYAQY+S+
Sbjct: 82 REGICGSCAMNIDGTNTLACTKAISDIKSDVKIYPLPHMYVIKDLVPDLSNFYAQYESVT 141
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PW+Q ++ N N + LQ+++DR KLDG+Y+CILCACCSTSCPSYWWN +KYLGPA L+QA
Sbjct: 142 PWMQAEEPN-HNKERLQTIEDRSKLDGIYDCILCACCSTSCPSYWWNSDKYLGPAALLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE + RL+ L D F +YRCHTIMNCT+TCPKGLNP +AIA IK+++
Sbjct: 201 YRWLIDSRDEASNSRLDMLDDAFKLYRCHTIMNCTKTCPKGLNPAKAIAHIKQMM 255
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 102/182 (56%), Gaps = 34/182 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW----------KILGTLTAKN----IRSFQL 106
HMYV+KDLVPD++NFYAQY+S+ PW + L T+ ++ I L
Sbjct: 119 HMYVIKDLVPDLSNFYAQYESVT-----PWMQAEEPNHNKERLQTIEDRSKLDGIYDCIL 173
Query: 107 SAAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSK 160
A S++ P+ KY YRW D DE N+++D D K
Sbjct: 174 CACCSTSCPSYWWNSDKYLGPAALLQAYRWLIDSRDEAS---------NSRLDMLDDAFK 224
Query: 161 IY 162
+Y
Sbjct: 225 LY 226
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K ++ K KIYPLPHMYV+KDLVPD++NFYAQY+S+
Sbjct: 82 REGICGSCAMNIDGTNTLACTKAISDIKSDVKIYPLPHMYVIKDLVPDLSNFYAQYESVT 141
Query: 359 PWL 361
PW+
Sbjct: 142 PWM 144
>gi|161619818|ref|YP_001593705.1| succinate dehydrogenase iron-sulfur subunit [Brucella canis ATCC
23365]
gi|260567610|ref|ZP_05838080.1| succinate dehydrogenase catalytic subunit [Brucella suis bv. 4 str.
40]
gi|376275505|ref|YP_005115944.1| succinate dehydrogenase catalytic subunit [Brucella canis HSK
A52141]
gi|161336629|gb|ABX62934.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella canis ATCC 23365]
gi|260157128|gb|EEW92208.1| succinate dehydrogenase catalytic subunit [Brucella suis bv. 4 str.
40]
gi|363404072|gb|AEW14367.1| succinate dehydrogenase catalytic subunit [Brucella canis HSK
A52141]
Length = 259
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-PQMEWLQSHEDRRKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|51473297|ref|YP_067054.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia typhi str.
Wilmington]
gi|383752073|ref|YP_005427173.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia typhi str.
TH1527]
gi|383842908|ref|YP_005423411.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia typhi str.
B9991CWPP]
gi|81826336|sp|Q68XS0.1|DHSB_RICTY RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|51459609|gb|AAU03572.1| Fumarate dehydrogenase [Rickettsia typhi str. Wilmington]
gi|380758716|gb|AFE53951.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia typhi str.
TH1527]
gi|380759555|gb|AFE54789.1| succinate dehydrogenase iron-sulfur subunit [Rickettsia typhi str.
B9991CWPP]
Length = 261
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 103/145 (71%), Positives = 123/145 (84%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDLVPDM++FY QY+SI+PWL+ D N++ LQS+ DR+KLDGLYEC
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYTQYESIEPWLKNDNPAPSNSERLQSIQDREKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +KYLGPA+L+QAYRWI DSRD+ T RL L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNSDKYLGPAILLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
MNCT+TCPKGLNP +AI +K L++
Sbjct: 232 MNCTKTCPKGLNPAKAIGRVKSLIA 256
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPDM++FY QY+SI+ PW
Sbjct: 118 HMKVVKDLVPDMSHFYTQYESIE-----PW 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPDM++FY QY+SI+PWL
Sbjct: 112 KIYPLPHMKVVKDLVPDMSHFYTQYESIEPWL 143
>gi|430812303|emb|CCJ30243.1| unnamed protein product [Pneumocystis jirovecii]
Length = 274
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 156/255 (61%), Gaps = 52/255 (20%)
Query: 98 AKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------- 149
+N+R+ + + S +E +K I +P+ P KPTMQ+Y++DLN
Sbjct: 22 VRNLRTSCIPRMSMSVASSEISSKSDKPNIK--SPETPSIKPTMQKYEIDLNTTGPMVLD 79
Query: 150 ----------------------------------------NKIDANDKVSKIYPLPHMYV 169
++I N K KIYPLPH YV
Sbjct: 80 AIIKIKNEQDATLTFRRSCREGICGSCAMNINGINTLACLSRIPINSKEVKIYPLPHTYV 139
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
VKDLVPD+ +FY QYKSIQP+LQ + + LQS +RKKLDGLYECILCACCSTSC
Sbjct: 140 VKDLVPDLTHFYKQYKSIQPYLQH--KEFPEKEILQSQKNRKKLDGLYECILCACCSTSC 197
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWN E+YLGPAVLMQAYRW+IDSRD+ T +R +L++ S+YRCHTIMNC RTCPKG
Sbjct: 198 PSYWWNSEEYLGPAVLMQAYRWLIDSRDDATQERKEKLQNSMSLYRCHTIMNCARTCPKG 257
Query: 290 LNPGRAIAEIKKLLS 304
LNPG+AIAEIKK ++
Sbjct: 258 LNPGKAIAEIKKSMA 272
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 101/168 (60%), Gaps = 18/168 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE D TLTFRRSCREGICGSCAMNI G+NTLAC+S+I N K KIYPLP
Sbjct: 76 MVLDAIIKIKNEQDATLTFRRSCREGICGSCAMNINGINTLACLSRIPINSKEVKIYPLP 135
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQ---RHLGGPWKILGTLTAKNIRSFQ------LSAAAS 111
H YVVKDLVPD+ +FY QYKSIQ +H P K + + KN + L A S
Sbjct: 136 HTYVVKDLVPDLTHFYKQYKSIQPYLQHKEFPEKEI-LQSQKNRKKLDGLYECILCACCS 194
Query: 112 SAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKID 153
++ P+ E YRW D D+ QE K L N +
Sbjct: 195 TSCPSYWWNSEEYLGPAVLMQAYRWLIDSRDD--ATQERKEKLQNSMS 240
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I N K KIYPLPH YVVKDLVPD+ +FY QYKSIQP+L
Sbjct: 112 GINTLACLSRIPINSKEVKIYPLPHTYVVKDLVPDLTHFYKQYKSIQPYL 161
>gi|213401559|ref|XP_002171552.1| succinate dehydrogenase iron-sulfur subunit [Schizosaccharomyces
japonicus yFS275]
gi|211999599|gb|EEB05259.1| succinate dehydrogenase iron-sulfur subunit [Schizosaccharomyces
japonicus yFS275]
Length = 252
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 157/255 (61%), Gaps = 55/255 (21%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDA 154
+ + + QL + +SA K F +YRWNPD P+ KP +Q+Y+V+L +DA
Sbjct: 2 RRMATEQLKVSTASAA-----DNIKEFQVYRWNPDTPEVKPRLQKYRVNLKECGPMVLDA 56
Query: 155 NDKVS---------------------------------------------KIYPLPHMYV 169
K+ KIYPLPH Y+
Sbjct: 57 LIKIKNEQDPTLTFRRSCREGICGSCAMNINGCNTLACLCRIQKESKKPVKIYPLPHSYI 116
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
VKDLVPD+ FY QYKSIQP+LQ + + + ++ QS +DR KLDGLYECILCACCSTSC
Sbjct: 117 VKDLVPDLTYFYKQYKSIQPYLQ-NPDVPEDREFYQSPEDRAKLDGLYECILCACCSTSC 175
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWN E+YLGPAVL+QAYRWIIDSRD TA+RL+ +++ SVYRCHTIMNC RTCPK
Sbjct: 176 PSYWWNSEEYLGPAVLLQAYRWIIDSRDAATAERLDMMQNSMSVYRCHTIMNCARTCPKS 235
Query: 290 LNPGRAIAEIKKLLS 304
LNPG AIA+IK L+S
Sbjct: 236 LNPGIAIAKIKLLMS 250
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLAC+ +I K KIYPL
Sbjct: 52 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGCNTLACLCRIQKESKKPVKIYPL 111
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
PH Y+VKDLVPD+ FY QYKSIQ +L P
Sbjct: 112 PHSYIVKDLVPDLTYFYKQYKSIQPYLQNP 141
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A L +I K KIYPLPH Y+VKDLVPD+ FY QYKSIQP+L
Sbjct: 88 GCNTLACLCRIQKESKKPVKIYPLPHSYIVKDLVPDLTYFYKQYKSIQPYL 138
>gi|23502752|ref|NP_698879.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis 1330]
gi|261755611|ref|ZP_05999320.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 3
str. 686]
gi|376281547|ref|YP_005155553.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis VBI22]
gi|384225539|ref|YP_005616703.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis 1330]
gi|23348770|gb|AAN30794.1| succinate dehydrogenase, iron-sulfur protein [Brucella suis 1330]
gi|261745364|gb|EEY33290.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 3
str. 686]
gi|343383719|gb|AEM19211.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis 1330]
gi|358259146|gb|AEU06881.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis VBI22]
Length = 259
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-PQMEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|17986446|ref|NP_539080.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
bv. 1 str. 16M]
gi|62290757|ref|YP_222550.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. 9-941]
gi|82700668|ref|YP_415242.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
biovar Abortus 2308]
gi|148560298|ref|YP_001259725.1| succinate dehydrogenase iron-sulfur subunit [Brucella ovis ATCC
25840]
gi|163843924|ref|YP_001628328.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis ATCC
23445]
gi|189024970|ref|YP_001935738.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus S19]
gi|225853338|ref|YP_002733571.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
ATCC 23457]
gi|237816263|ref|ZP_04595256.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella abortus str. 2308 A]
gi|256263175|ref|ZP_05465707.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv.
2 str. 63/9]
gi|256370303|ref|YP_003107814.1| succinate dehydrogenase iron-sulfur subunit [Brucella microti CCM
4915]
gi|260546022|ref|ZP_05821762.1| succinate dehydrogenase catalytic subunit [Brucella abortus NCTC
8038]
gi|260562818|ref|ZP_05833304.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv.
1 str. 16M]
gi|260758806|ref|ZP_05871154.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 4
str. 292]
gi|260760530|ref|ZP_05872873.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 2
str. 86/8/59]
gi|260884606|ref|ZP_05896220.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 9
str. C68]
gi|261214853|ref|ZP_05929134.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 3
str. Tulya]
gi|261217730|ref|ZP_05932011.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti
M13/05/1]
gi|261220956|ref|ZP_05935237.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti B1/94]
gi|261315056|ref|ZP_05954253.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis
M163/99/10]
gi|261316387|ref|ZP_05955584.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis
B2/94]
gi|261321422|ref|ZP_05960619.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti
M644/93/1]
gi|261323848|ref|ZP_05963045.1| succinate dehydrogenase iron-sulfur subunit [Brucella neotomae
5K33]
gi|265987460|ref|ZP_06100017.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis
M292/94/1]
gi|265991932|ref|ZP_06104489.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|265993664|ref|ZP_06106221.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
bv. 3 str. Ether]
gi|265996915|ref|ZP_06109472.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti
M490/95/1]
gi|297247144|ref|ZP_06930862.1| succinate dehydrogenase iron-sulfur protein [Brucella abortus bv. 5
str. B3196]
gi|306843356|ref|ZP_07475957.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella inopinata BO1]
gi|340791490|ref|YP_004756955.1| succinate dehydrogenase, iron-sulfur subunit [Brucella
pinnipedialis B2/94]
gi|376272379|ref|YP_005150957.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella abortus A13334]
gi|384212250|ref|YP_005601334.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella melitensis M5-90]
gi|384409355|ref|YP_005597976.1| succinate dehydrogenase catalytic subunit [Brucella melitensis M28]
gi|384445894|ref|YP_005604613.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
NI]
gi|423168122|ref|ZP_17154825.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI435a]
gi|423169502|ref|ZP_17156177.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI474]
gi|423175508|ref|ZP_17162177.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI486]
gi|423177642|ref|ZP_17164287.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI488]
gi|423178935|ref|ZP_17165576.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI010]
gi|423182066|ref|ZP_17168703.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI016]
gi|423186992|ref|ZP_17173606.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI021]
gi|423190572|ref|ZP_17177180.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI259]
gi|17982042|gb|AAL51344.1| succinate dehydrogenase iron-sulfur protein [Brucella melitensis
bv. 1 str. 16M]
gi|62196889|gb|AAX75189.1| SdhB, succinate dehydrogenase, iron-sulfur protein [Brucella
abortus bv. 1 str. 9-941]
gi|82616769|emb|CAJ11856.1| 4Fe-4S ferredoxin, iron-sulfur binding domain:Succinate
dehydrogenase/fumarate reductase iron-sulfur
protein:2Fe-2S ferredoxin [Brucella melitensis biovar
Abortus 2308]
gi|148371555|gb|ABQ61534.1| succinate dehydrogenase, iron-sulfur protein [Brucella ovis ATCC
25840]
gi|163674647|gb|ABY38758.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella suis ATCC 23445]
gi|189020542|gb|ACD73264.1| succinate dehydrogenase catalytic subunit [Brucella abortus S19]
gi|225641703|gb|ACO01617.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella melitensis ATCC 23457]
gi|237788330|gb|EEP62545.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella abortus str. 2308 A]
gi|256000466|gb|ACU48865.1| succinate dehydrogenase catalytic subunit [Brucella microti CCM
4915]
gi|260096129|gb|EEW80005.1| succinate dehydrogenase catalytic subunit [Brucella abortus NCTC
8038]
gi|260152834|gb|EEW87926.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv.
1 str. 16M]
gi|260669124|gb|EEX56064.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 4
str. 292]
gi|260670962|gb|EEX57783.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 2
str. 86/8/59]
gi|260874134|gb|EEX81203.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 9
str. C68]
gi|260916460|gb|EEX83321.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 3
str. Tulya]
gi|260919540|gb|EEX86193.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti B1/94]
gi|260922819|gb|EEX89387.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti
M13/05/1]
gi|261294112|gb|EEX97608.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti
M644/93/1]
gi|261295610|gb|EEX99106.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis
B2/94]
gi|261299828|gb|EEY03325.1| succinate dehydrogenase iron-sulfur subunit [Brucella neotomae
5K33]
gi|261304082|gb|EEY07579.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis
M163/99/10]
gi|262551383|gb|EEZ07373.1| succinate dehydrogenase iron-sulfur subunit [Brucella ceti
M490/95/1]
gi|262764645|gb|EEZ10566.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
bv. 3 str. Ether]
gi|263002998|gb|EEZ15291.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|263093081|gb|EEZ17231.1| succinate dehydrogenase catalytic subunit [Brucella melitensis bv.
2 str. 63/9]
gi|264659657|gb|EEZ29918.1| succinate dehydrogenase iron-sulfur subunit [Brucella pinnipedialis
M292/94/1]
gi|297174313|gb|EFH33660.1| succinate dehydrogenase iron-sulfur protein [Brucella abortus bv. 5
str. B3196]
gi|306276047|gb|EFM57747.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella inopinata BO1]
gi|326409902|gb|ADZ66967.1| succinate dehydrogenase catalytic subunit [Brucella melitensis M28]
gi|326539615|gb|ADZ87830.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella melitensis M5-90]
gi|340559949|gb|AEK55187.1| succinate dehydrogenase, iron-sulfur subunit [Brucella
pinnipedialis B2/94]
gi|349743883|gb|AEQ09426.1| succinate dehydrogenase iron-sulfur subunit [Brucella melitensis
NI]
gi|363399985|gb|AEW16955.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella abortus A13334]
gi|374535952|gb|EHR07473.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI486]
gi|374539871|gb|EHR11374.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI435a]
gi|374543181|gb|EHR14664.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI474]
gi|374549230|gb|EHR20674.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI488]
gi|374551879|gb|EHR23308.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI016]
gi|374552251|gb|EHR23679.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI010]
gi|374554342|gb|EHR25753.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI259]
gi|374557704|gb|EHR29100.1| succinate dehydrogenase iron-sulfur subunit [Brucella abortus bv. 1
str. NI021]
Length = 259
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|225628101|ref|ZP_03786136.1| aspartate kinase [Brucella ceti str. Cudo]
gi|261758844|ref|ZP_06002553.1| succinate dehydrogenase catalytic subunit [Brucella sp. F5/99]
gi|225616926|gb|EEH13973.1| aspartate kinase [Brucella ceti str. Cudo]
gi|261738828|gb|EEY26824.1| succinate dehydrogenase catalytic subunit [Brucella sp. F5/99]
Length = 259
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDDANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDDANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 112 KVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|397588443|gb|EJK54269.1| hypothetical protein THAOC_26120, partial [Thalassiosira oceanica]
Length = 302
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQSLDDRKKLDGL 216
V+KIYPLPHMYV+KDLVPDM NFY QY+SI+PWLQ ++ + G ++LQ+ +DR KLDG+
Sbjct: 153 VTKIYPLPHMYVLKDLVPDMGNFYEQYRSIEPWLQSKEGKKEGQGEFLQTREDRAKLDGM 212
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +KYLGPAVLMQAYRWI DSRD+ T RL +L D F +YRC
Sbjct: 213 YECILCACCSTSCPSYWWNSDKYLGPAVLMQAYRWIEDSRDDMTDKRLAELDDAFKLYRC 272
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTIMNCT+ CPK LNPG+AIA IKK L+
Sbjct: 273 HTIMNCTKVCPKHLNPGKAIAHIKKKLA 300
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 75/96 (78%), Gaps = 11/96 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND------KVS 54
MVLDALIKIK+E DPTLTFRRSCREGICGSCAMNI G NTLAC+ ID + V+
Sbjct: 95 MVLDALIKIKSEQDPTLTFRRSCREGICGSCAMNINGQNTLACLCYIDGKEGEKKSGGVT 154
Query: 55 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
KIYPLPHMYV+KDLVPDM NFY QY+SI+ PW
Sbjct: 155 KIYPLPHMYVLKDLVPDMGNFYEQYRSIE-----PW 185
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 32/34 (94%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V+KIYPLPHMYV+KDLVPDM NFY QY+SI+PWL
Sbjct: 153 VTKIYPLPHMYVLKDLVPDMGNFYEQYRSIEPWL 186
>gi|428162837|gb|EKX31945.1| hypothetical protein GUITHDRAFT_159012 [Guillardia theta CCMP2712]
Length = 238
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 146/234 (62%), Gaps = 55/234 (23%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K F IYRW+PD+ +PTM Y ++L+
Sbjct: 11 RIKYFQIYRWDPDQ-SSRPTMATYPINLSECGPMVLDALLKIKNEQDSTLTFRRSCREGI 69
Query: 151 ------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
+ID + +KIYPLPHMYVVKDLVPDM NFYAQYK+I+PWLQ
Sbjct: 70 CGSCAMNIDGSNTLACLARIDTSSSKTKIYPLPHMYVVKDLVPDMTNFYAQYKTIEPWLQ 129
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
++ GN Y+ S DR LDG+YECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWI
Sbjct: 130 KE----GNENYM-SKKDRDVLDGMYECILCACCSTSCPSYWWNSEKYLGPAVLMQAYRWI 184
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK-KLLSG 305
DSRD+ T R+ L D + +YRCHTIMNCT+TCPK LNPG AIA +K KL++G
Sbjct: 185 CDSRDQNTKKRMEMLDDTYKLYRCHTIMNCTKTCPKSLNPGLAIARLKRKLVTG 238
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 76/90 (84%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE D TLTFRRSCREGICGSCAMNI G NTLAC+++ID + +KIYPLP
Sbjct: 43 MVLDALLKIKNEQDSTLTFRRSCREGICGSCAMNIDGSNTLACLARIDTSSSKTKIYPLP 102
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYVVKDLVPDM NFYAQYK+I+ PW
Sbjct: 103 HMYVVKDLVPDMTNFYAQYKTIE-----PW 127
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +ID + +KIYPLPHMYVVKDLVPDM NFYAQYK+I+PWL +
Sbjct: 84 ACLARIDTSSSKTKIYPLPHMYVVKDLVPDMTNFYAQYKTIEPWLQK 130
>gi|189184861|ref|YP_001938646.1| succinate dehydrogenase iron-sulfur subunit [Orientia tsutsugamushi
str. Ikeda]
gi|189181632|dbj|BAG41412.1| succinate dehydrogenase iron-sulfur protein [Orientia tsutsugamushi
str. Ikeda]
Length = 261
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 125/141 (88%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPHM V+KDLV DM +FYAQY+SI+PWL+ + +I + + LQ+ +DR KLDGLYECI
Sbjct: 113 IYPLPHMSVIKDLVSDMTHFYAQYQSIEPWLKAETIDITSGERLQTPEDRDKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCST+CPSYWWN +KYLGPAVL+QAYRWIIDSRDE T++RL+QL+D F +YRCHTIM
Sbjct: 173 LCACCSTACPSYWWNADKYLGPAVLLQAYRWIIDSRDEHTSERLDQLEDSFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKK 301
NCT+TCPKGLNP +AI+EIKK
Sbjct: 233 NCTKTCPKGLNPAKAISEIKK 253
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 91/158 (57%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNI G N LACI I+ IYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNINGTNGLACIKAINDIKGDVIIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLV DM +FYAQY+SI+ PW T+ + Q
Sbjct: 118 HMSVIKDLVSDMTHFYAQYQSIE-----PWLKAETIDITSGERLQTPEDRDKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S+A P+ KY A+ YRW D DE
Sbjct: 173 LCACCSTACPSYWWNADKYLGPAVLLQAYRWIIDSRDE 210
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLV DM +FYAQY+SI+PWL
Sbjct: 113 IYPLPHMSVIKDLVSDMTHFYAQYQSIEPWL 143
>gi|15237464|ref|NP_198881.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2
[Arabidopsis thaliana]
gi|110808205|sp|Q8LB02.2|DHSB2_ARATH RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit 2, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|9758093|dbj|BAB08537.1| succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana]
gi|18377692|gb|AAL66996.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis
thaliana]
gi|21689851|gb|AAM67569.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis
thaliana]
gi|332007195|gb|AED94578.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2
[Arabidopsis thaliana]
Length = 280
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 144/245 (58%), Gaps = 50/245 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------- 150
S A S A A KTF IYRWNPD P KP +Q+YK+DL +
Sbjct: 33 SEAQSKASTGGGGASLKTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEM 91
Query: 151 --------------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMN 178
KI++ K + I PLPHM+V+KDLV DM
Sbjct: 92 DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMT 151
Query: 179 NFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
NFY QYKSI+PWL+R + ++ + LQS DR KLDG+YECILCACCSTSCPSYWWN E
Sbjct: 152 NFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE 211
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CPKGLNPG+ I
Sbjct: 212 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIT 271
Query: 298 EIKKL 302
IK+L
Sbjct: 272 HIKQL 276
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI++ K + I PLP
Sbjct: 79 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 139 HMFVIKDLVVDMTNFYNQYKSIE-----PW 163
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI++ K + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 120 ACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
>gi|344940257|ref|ZP_08779545.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacter tundripaludum SV96]
gi|344261449|gb|EGW21720.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacter tundripaludum SV96]
Length = 261
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 127/152 (83%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
ID+ KIYPLPH+ VVKDLV D+ +FYAQY SI+PW++ +++ LQS +DR+
Sbjct: 104 IDSYSGTIKIYPLPHLQVVKDLVADLTHFYAQYASIKPWIETQTPAPADSERLQSKEDRE 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLY+C+LCACCSTSCPSYWWN E+YLGPA+L+QAYRW++DSRDE T +RL++L+DPF
Sbjct: 164 KLDGLYDCVLCACCSTSCPSYWWNSERYLGPAILLQAYRWLVDSRDESTGERLDELEDPF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNCT TCPKGLNP +AIAE KKLL
Sbjct: 224 KLYRCHTIMNCTDTCPKGLNPAKAIAETKKLL 255
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA++KIKNE+D +LTFRRSCREG+CGSCAM I G N+LAC ID+ KIYPLP
Sbjct: 58 MVLDAILKIKNEIDSSLTFRRSCREGVCGSCAMMINGKNSLACTKAIDSYSGTIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLV D+ +FYAQY SI+ PW
Sbjct: 118 HLQVVKDLVADLTHFYAQYASIK-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A ID+ KIYPLPH+ VVKDLV D+ +FYAQY SI+PW+
Sbjct: 99 ACTKAIDSYSGTIKIYPLPHLQVVKDLVADLTHFYAQYASIKPWI 143
>gi|302828426|ref|XP_002945780.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase
[Volvox carteri f. nagariensis]
gi|300268595|gb|EFJ52775.1| iron-sulfur subunit of mitochondrial succinate dehydrogenase
[Volvox carteri f. nagariensis]
Length = 291
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 148/239 (61%), Gaps = 51/239 (21%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------- 150
P KP YK F IYRWNP+ DEKP Y+VD+NN
Sbjct: 49 APLSKPPLYKEFQIYRWNPNG-DEKPKYVSYQVDINNCGPMMLDVLLKIKDEQDQTLSLR 107
Query: 151 -------------KIDANDK-------------VSKIYPLPHMYVVKDLVPDMNNFYAQY 184
ID + V K+ PLPHM+VVKDLV DM+NFYAQY
Sbjct: 108 RSCREGICGSCAMNIDGTNTLACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMSNFYAQY 167
Query: 185 KSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
KSI+P+LQ+ KE ++ QS + R KLDG+YECILCACCSTSCPSYWWN +KYLGPAV
Sbjct: 168 KSIKPYLQK-KEASSGKEWYQSKESRAKLDGMYECILCACCSTSCPSYWWNSDKYLGPAV 226
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+ AYRWIIDSRD+ TA+R+ QL D + +YRC TIMNC CPKGLNPG+AIA++K+ +
Sbjct: 227 LLAAYRWIIDSRDDYTAERMAQLDDAYKLYRCKTIMNCATVCPKGLNPGKAIAKLKQTM 285
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 90/144 (62%), Gaps = 21/144 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LD L+KIK+E D TL+ RRSCREGICGSCAMNI G NTLAC+ K++ + V K+ PL
Sbjct: 88 MMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNIDGTNTLACLCKVNRDPGHVGKVAPL 147
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKNIRSFQ--LSAAA 110
PHM+VVKDLV DM+NFYAQYKSI+ +L G W AK ++ L A
Sbjct: 148 PHMFVVKDLVVDMSNFYAQYKSIKPYLQKKEASSGKEWYQSKESRAKLDGMYECILCACC 207
Query: 111 SSAVPAEKPAKYKTFAIYRWNPDK 134
S++ P+ Y WN DK
Sbjct: 208 STSCPS-----------YWWNSDK 220
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L K++ + V K+ PLPHM+VVKDLV DM+NFYAQYKSI+P+L +
Sbjct: 129 ACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMSNFYAQYKSIKPYLQK 176
>gi|366986961|ref|XP_003673247.1| hypothetical protein NCAS_0A02980 [Naumovozyma castellii CBS 4309]
gi|342299110|emb|CCC66856.1| hypothetical protein NCAS_0A02980 [Naumovozyma castellii CBS 4309]
Length = 268
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 145/231 (62%), Gaps = 49/231 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF +YRWNPD P +KP +Q ++V+LN
Sbjct: 36 KTFRVYRWNPDTPAKKPFLQSFQVNLNECGPMVLDALLKIKNEQDSTLSLRRSCREGICG 95
Query: 151 ----------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KID N+ K KIYPLPHM+++KDLVPD+ NF+ QYKSIQP+LQR
Sbjct: 96 SCAMNIGGRNTLACICKIDPNNNKELKIYPLPHMFIIKDLVPDLTNFFQQYKSIQPYLQR 155
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ QS+ DRKK+DG YECILCACCST+CPSYWWN E+YLGPA L+QAYRW++
Sbjct: 156 KNFPEAGKEIRQSITDRKKIDGYYECILCACCSTACPSYWWNQEEYLGPAALLQAYRWLV 215
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
DSRD+ R L++ S+YRCHTI+NCT+TCPKGLNP AIAEI+K L+
Sbjct: 216 DSRDQAGKARKEMLENSMSLYRCHTILNCTKTCPKGLNPALAIAEIRKKLA 266
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDAL+KIKNE D TL+ RRSCREGICGSCAMNIGG NTLACI KID N+K KIYPL
Sbjct: 67 MVLDALLKIKNEQDSTLSLRRSCREGICGSCAMNIGGRNTLACICKIDPNNNKELKIYPL 126
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+++KDLVPD+ NF+ QYKSIQ +L
Sbjct: 127 PHMFIIKDLVPDLTNFFQQYKSIQPYL 153
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID N+ K KIYPLPHM+++KDLVPD+ NF+ QYKSIQP+L R
Sbjct: 108 ACICKIDPNNNKELKIYPLPHMFIIKDLVPDLTNFFQQYKSIQPYLQR 155
>gi|163761418|ref|ZP_02168492.1| succinate dehydrogenase subunit B, iron-sulfur protein [Hoeflea
phototrophica DFL-43]
gi|162281413|gb|EDQ31710.1| succinate dehydrogenase subunit B, iron-sulfur protein [Hoeflea
phototrophica DFL-43]
Length = 259
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F IYRW+PD E P + + +D + NKIDA
Sbjct: 22 EGATHTREFKIYRWSPDDA-ENPRIDTFHIDTDDCGPMVLDGLLWIKNKIDATLTLRRSC 80
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D K+YPLPH+ VVKDLVPD+ NFYAQ++SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGLDEIDGAVKVYPLPHLPVVKDLVPDLTNFYAQHRSIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLKTVSPTPAK-EWKQSHEDRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDESTGERLDDLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++D TLT RRSCREGICGSCAMNI G NTLAC +D D K+YPLP
Sbjct: 58 MVLDGLLWIKNKIDATLTLRRSCREGICGSCAMNIDGTNTLACTKGLDEIDGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D D K+YPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDEIDGAVKVYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|21593098|gb|AAM65047.1| succinate dehydrogenase iron-protein subunit-like [Arabidopsis
thaliana]
Length = 280
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 144/245 (58%), Gaps = 50/245 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------- 150
S A S A A KTF IYRWNPD P KP +Q+YK+DL +
Sbjct: 33 SEAQSKASTGGGGASLKTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEM 91
Query: 151 --------------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMN 178
KI++ K + I PLPHM+V+KDLV DM
Sbjct: 92 DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMT 151
Query: 179 NFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
NFY QYKSI+PWL+R + ++ + LQS DR KLDG+YECILCACCSTSCPSYWWN E
Sbjct: 152 NFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE 211
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CPKGLNPG+ I
Sbjct: 212 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIT 271
Query: 298 EIKKL 302
IK+L
Sbjct: 272 HIKQL 276
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI++ K + I PLP
Sbjct: 79 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 139 HMFVIKDLVVDMTNFYNQYKSIE-----PW 163
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI++ K + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 120 ACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
>gi|58696677|ref|ZP_00372228.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Drosophila simulans]
gi|58537139|gb|EAL60247.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Drosophila simulans]
Length = 204
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 123/144 (85%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMYV+KDLV D++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 55 KIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDC 114
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWN +K+LGPA+L+QAYRWI DSRD KT +RL+ L DPF +YRCH I
Sbjct: 115 ILCACCSTGCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHAI 174
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP RAIA++K+L+
Sbjct: 175 MNCTKTCPKGLNPARAIAKVKQLM 198
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 1 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLP 60
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYV+KDLV D++ FY QYKSI+ PW
Sbjct: 61 HMYVIKDLVSDLSQFYEQYKSIK-----PW 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I + KIYPLPHMYV+KDLV D++ FY QYKSI+PWL
Sbjct: 44 TRSIHDIKGD---VKIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWL 86
>gi|225630498|ref|YP_002727289.1| succinate dehydrogenase catalytic subunit [Wolbachia sp. wRi]
gi|225592479|gb|ACN95498.1| succinate dehydrogenase catalytic subunit [Wolbachia sp. wRi]
Length = 262
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 123/144 (85%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMYV+KDLV D++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWN +K+LGPA+L+QAYRWI DSRD KT +RL+ L DPF +YRCH I
Sbjct: 173 ILCACCSTGCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHAI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP RAIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPARAIAKVKQLM 256
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYV+KDLV D++ FY QYKSI+ PW
Sbjct: 119 HMYVIKDLVSDLSQFYEQYKSIK-----PW 143
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I + KIYPLPHMYV+KDLV D++ FY QYKSI+PWL
Sbjct: 102 TRSIHDIKGD---VKIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWL 144
>gi|223997572|ref|XP_002288459.1| precursor of hydrogenase [Thalassiosira pseudonana CCMP1335]
gi|220975567|gb|EED93895.1| precursor of hydrogenase [Thalassiosira pseudonana CCMP1335]
Length = 240
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/162 (67%), Positives = 129/162 (79%), Gaps = 1/162 (0%)
Query: 144 YKVDLNNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQ 202
Y D K + V KIYPLPHMYV+KDLVPDM NFY QY+SI+PWLQ +D + G A+
Sbjct: 77 YIEDKEKKGSSGGDVMKIYPLPHMYVLKDLVPDMGNFYEQYRSIEPWLQTKDGKAEGQAE 136
Query: 203 YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTAD 262
YLQ+ +DR KLDG+YECILCACCST+CPSYWWN +KYLGPAVLMQAYRWI DSRD+ T
Sbjct: 137 YLQTREDRAKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAYRWIEDSRDDFTDK 196
Query: 263 RLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
RL +L D F +YRCHTIMNC++ CPK LNPG+AIA IKK L+
Sbjct: 197 RLAELDDAFKLYRCHTIMNCSKVCPKHLNPGKAIAHIKKKLA 238
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 102/176 (57%), Gaps = 30/176 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-------V 53
MVLDALIKIK+E DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ +K V
Sbjct: 32 MVLDALIKIKSEQDPTLTFRRSCREGICGSCAMNINGRNTLACLCYIEDKEKKGSSGGDV 91
Query: 54 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLG-------GPWKILGTLTAK----NIR 102
KIYPLPHMYV+KDLVPDM NFY QY+SI+ L G + L T + +
Sbjct: 92 MKIYPLPHMYVLKDLVPDMGNFYEQYRSIEPWLQTKDGKAEGQAEYLQTREDRAKLDGMY 151
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
L A S+A P+ Y WN DK MQ Y+ +++ D DK
Sbjct: 152 ECILCACCSTACPS-----------YWWNADKYLGPAVLMQAYRWIEDSRDDFTDK 196
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 33/41 (80%)
Query: 321 KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K + V KIYPLPHMYV+KDLVPDM NFY QY+SI+PWL
Sbjct: 84 KGSSGGDVMKIYPLPHMYVLKDLVPDMGNFYEQYRSIEPWL 124
>gi|114769282|ref|ZP_01446908.1| succinate dehydrogenase catalytic subunit [Rhodobacterales
bacterium HTCC2255]
gi|114550199|gb|EAU53080.1| succinate dehydrogenase catalytic subunit [Rhodobacterales
bacterium HTCC2255]
Length = 259
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 147/233 (63%), Gaps = 50/233 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVS------------- 159
E + F IYRWNPD E P++ Y +D++ +DA K+
Sbjct: 22 EGATNIRAFKIYRWNPDT-GENPSLDTYFLDMDKCGPMVLDALVKIKSEVDPTLTFRRSC 80
Query: 160 -------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
KIYPLPHM V+KDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNVDGINTLACIYGLDEIKGDVKIYPLPHMEVIKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNKPATEWRQSIEDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK
Sbjct: 200 YRWIIDSRDEATGERLDELQDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKK 252
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIK+E+DPTLTFRRSCREGICGSCAMN+ G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALVKIKSEVDPTLTFRRSCREGICGSCAMNVDGINTLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMEVIKDLIPDLTHFYAQHASIM-----PW 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM V+KDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEIKGDVKIYPLPHMEVIKDLIPDLTHFYAQHASIMPWL 143
>gi|261751049|ref|ZP_05994758.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 5
str. 513]
gi|261740802|gb|EEY28728.1| succinate dehydrogenase iron-sulfur subunit [Brucella suis bv. 5
str. 513]
Length = 259
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 147/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+Q YRW
Sbjct: 144 KTVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQTYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|58700114|ref|ZP_00374638.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58533368|gb|EAL57843.1| succinate dehydrogenase, iron-sulfur protein [Wolbachia
endosymbiont of Drosophila ananassae]
Length = 270
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 123/144 (85%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMYV+KDLV D++ FY QYKSI+PWLQ DK + N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWLQADKPALPNKEYSQSSEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CPSYWWN +K+LGPA+L+QAYRWI DSRD KT +RL+ L DPF +YRCH I
Sbjct: 173 ILCACCSTGCPSYWWNSDKFLGPAILLQAYRWIADSRDNKTGERLDVLNDPFKLYRCHAI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP RAIA++K+L+
Sbjct: 233 MNCTKTCPKGLNPARAIAKVKQLM 256
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTRSIHDIKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYV+KDLV D++ FY QYKSI+ PW
Sbjct: 119 HMYVIKDLVSDLSQFYEQYKSIK-----PW 143
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H I + KIYPLPHMYV+KDLV D++ FY QYKSI+PWL
Sbjct: 102 TRSIHDIKGD---VKIYPLPHMYVIKDLVSDLSQFYEQYKSIKPWL 144
>gi|13473605|ref|NP_105173.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium loti
MAFF303099]
gi|14024355|dbj|BAB50959.1| succinate dehydrogenase iron-sulfur protein subunit [Mesorhizobium
loti MAFF303099]
Length = 259
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD DE P + Y VD++ NKID
Sbjct: 22 EGATNLREYRIYRWSPDD-DENPRIDTYFVDMDDCGPMVLDALLWIKNKIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D +S K+YPLPHM VVKDLVPD+ NFYAQ+ SI+
Sbjct: 81 REGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+QA
Sbjct: 141 PWLKTVSPQPAK-EWLQSHEDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPATLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC D K+YPLP
Sbjct: 58 MVLDALLWIKNKIDPTLTLRRSCREGICGSCAMNIDGSNTLACTKGCDDISGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 HMQVVKDLVPDLTNFYAQHASIE-----PW 142
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K+YPLPHM VVKDLVPD+ NFYAQ+ SI+PWL
Sbjct: 94 GSNTLACTKGCDDISGAVKVYPLPHMQVVKDLVPDLTNFYAQHASIEPWL 143
>gi|239833032|ref|ZP_04681361.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Ochrobactrum intermedium LMG 3301]
gi|444309281|ref|ZP_21144920.1| succinate dehydrogenase iron-sulfur subunit [Ochrobactrum
intermedium M86]
gi|239825299|gb|EEQ96867.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Ochrobactrum intermedium LMG 3301]
gi|443487339|gb|ELT50102.1| succinate dehydrogenase iron-sulfur subunit [Ochrobactrum
intermedium M86]
Length = 259
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 148/231 (64%), Gaps = 50/231 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------- 159
+ F IYRW+PD D P++ Y VD + NKID +
Sbjct: 26 RVTEFRIYRWSPDD-DANPSIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84
Query: 160 ---------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL+
Sbjct: 85 CGSCAMNIDGANTLACTKGMDDIKGAIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWLK 144
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+
Sbjct: 145 TVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWL 203
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 204 IDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGAIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGAIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|357386213|ref|YP_004900937.1| succinate dehydrogenase iron-sulfur protein [Pelagibacterium
halotolerans B2]
gi|351594850|gb|AEQ53187.1| succinate dehydrogenase iron-sulfur protein [Pelagibacterium
halotolerans B2]
Length = 261
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/143 (72%), Positives = 125/143 (87%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
+YPLPHM VVKDLVPD++ FY Q+KS+QPWLQ K + ++LQ+ +DR KLDGLYECI
Sbjct: 114 VYPLPHMPVVKDLVPDLSTFYEQHKSVQPWLQT-KTPTPDTEWLQTKEDRAKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWNGEKYLGPAVL+QAYRW+IDSRDE T++RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNGEKYLGPAVLLQAYRWLIDSRDEATSERLDDLEDPFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC + CPKGLNP +AIAEIKK++
Sbjct: 233 NCAKVCPKGLNPAKAIAEIKKMM 255
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D + +YPL
Sbjct: 58 MILDALLWIKNTIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDEVSSGAIAVYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD++ FY Q+KS+Q PW
Sbjct: 118 PHMPVVKDLVPDLSTFYEQHKSVQ-----PW 143
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
Query: 313 GLDTAALHKIDANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D+VS +YPLPHM VVKDLVPD++ FY Q+KS+QPWL
Sbjct: 94 GANTLACTK--GMDEVSSGAIAVYPLPHMPVVKDLVPDLSTFYEQHKSVQPWL 144
>gi|365986438|ref|XP_003670051.1| hypothetical protein NDAI_0D04950 [Naumovozyma dairenensis CBS 421]
gi|343768820|emb|CCD24808.1| hypothetical protein NDAI_0D04950 [Naumovozyma dairenensis CBS 421]
Length = 264
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 160/263 (60%), Gaps = 52/263 (19%)
Query: 95 TLTAKNIRSFQLSAAASSAVPAEKPA--KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-- 150
+ + K+I S L+A P + K F IYRWNPD P +KP ++ ++VDL++
Sbjct: 3 STSMKSIYSSSLNAFGRRYFRVGLPQAQRLKQFKIYRWNPDSPAKKPFLETFQVDLDDCG 62
Query: 151 ----------------------------------------------KIDANDKV-SKIYP 163
+ID N K +K+YP
Sbjct: 63 PMVLDALIKIKNEKDSSLAFRRSCREGVCGSCAMNIGGRNTLACTCEIDNNLKQETKVYP 122
Query: 164 LPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCA 223
LPHM+++KDLVPD+ NF+ QYKSIQP+LQR+ G + LQS +DRK+LDG YECILCA
Sbjct: 123 LPHMFIIKDLVPDLTNFFQQYKSIQPYLQRNSFPKGR-EILQSPEDRKRLDGYYECILCA 181
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CCST+CPSYWWN E+YLGPAVL+QAYRW++DSRD+ +R L++ S+YRCH I+NCT
Sbjct: 182 CCSTACPSYWWNQEQYLGPAVLLQAYRWLVDSRDQAFKERKKMLENALSLYRCHFILNCT 241
Query: 284 RTCPKGLNPGRAIAEIKKLLSGL 306
RTCPKGLNP AIA+IKK L+
Sbjct: 242 RTCPKGLNPAYAIAQIKKQLATF 264
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKV-SKIYPL 59
MVLDALIKIKNE D +L FRRSCREG+CGSCAMNIGG NTLAC +ID N K +K+YPL
Sbjct: 64 MVLDALIKIKNEKDSSLAFRRSCREGVCGSCAMNIGGRNTLACTCEIDNNLKQETKVYPL 123
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+++KDLVPD+ NF+ QYKSIQ +L
Sbjct: 124 PHMFIIKDLVPDLTNFFQQYKSIQPYL 150
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 317 AALHKIDANDKV-SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A +ID N K +K+YPLPHM+++KDLVPD+ NF+ QYKSIQP+L R+
Sbjct: 105 ACTCEIDNNLKQETKVYPLPHMFIIKDLVPDLTNFFQQYKSIQPYLQRN 153
>gi|386828388|ref|ZP_10115495.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Beggiatoa alba B18LD]
gi|386429272|gb|EIJ43100.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Beggiatoa alba B18LD]
Length = 269
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 146/239 (61%), Gaps = 57/239 (23%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK------ 160
+ K F IYRWNPD E P M+ Y++DL+ N+ID + +
Sbjct: 27 RVKRFVIYRWNPDT-GENPYMETYEIDLDKCGPMILDALIKIKNEIDPSMTFRRSCREGI 85
Query: 161 ------------------------------------IYPLPHMYVVKDLVPDMNNFYAQY 184
I+PLPHM V+KDLVPD+ +FYAQY
Sbjct: 86 CGSCAMNIGDSAEFGGKGSNTLACTKAISEIKGDVVIHPLPHMPVIKDLVPDLTHFYAQY 145
Query: 185 KSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
SI+PW+Q + + LQS ++R KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+
Sbjct: 146 ASIKPWMQTQTPPPPDRERLQSKEERAKLDGLYECILCACCSTSCPSYWWNGEQYLGPAI 205
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRWIIDSRDE T +RL+ L+DPF VYRCHTIMNC +TCPKGLNP +AI IK+ L
Sbjct: 206 LLQAYRWIIDSRDEATGERLDDLEDPFRVYRCHTIMNCAKTCPKGLNPAKAITAIKQKL 264
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 70/98 (71%), Gaps = 13/98 (13%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIG--------GVNTLACISKIDANDK 52
M+LDALIKIKNE+DP++TFRRSCREGICGSCAMNIG G NTLAC I
Sbjct: 59 MILDALIKIKNEIDPSMTFRRSCREGICGSCAMNIGDSAEFGGKGSNTLACTKAISEIKG 118
Query: 53 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
I+PLPHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 119 DVVIHPLPHMPVIKDLVPDLTHFYAQYASIK-----PW 151
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P M+ Y +D D L ++K DP +R R+C +
Sbjct: 34 YRWNPDTGENP--YMETYEIDLDKCGPMILDALIKIKNEIDPSMTFR--------RSCRE 83
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ G I K T A+ +I + I+PLPHM V+KDLVPD+
Sbjct: 84 GIC-GSCAMNIGDSAEFGGKGSNTLACTKAISEIKGD---VVIHPLPHMPVIKDLVPDLT 139
Query: 349 NFYAQYKSIQPWL 361
+FYAQY SI+PW+
Sbjct: 140 HFYAQYASIKPWM 152
>gi|294851142|ref|ZP_06791815.1| succinate dehydrogenase iron-sulfur protein [Brucella sp. NVSL
07-0026]
gi|294819731|gb|EFG36730.1| succinate dehydrogenase iron-sulfur protein [Brucella sp. NVSL
07-0026]
Length = 259
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 148/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRD+ +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDKAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|433772478|ref|YP_007302945.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mesorhizobium australicum WSM2073]
gi|433664493|gb|AGB43569.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Mesorhizobium australicum WSM2073]
Length = 259
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD DE P M Y VD++ NKID
Sbjct: 22 EGATNLREYRIYRWSPDD-DENPRMDTYFVDMDDCGPMVLDALLWIKNKIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ +S KIYPLPHM V+KDLVPD+ NFYAQ+ SI+
Sbjct: 81 REGICGSCAMNIGGSNTLACTKGCEDISGAIKIYPLPHMPVIKDLVPDLTNFYAQHASIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+QA
Sbjct: 141 PWLKTVSPTPAK-EWLQSHEDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPATLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTLT RRSCREGICGSCAMNIGG NTLAC + KIYPLP
Sbjct: 58 MVLDALLWIKNKIDPTLTLRRSCREGICGSCAMNIGGSNTLACTKGCEDISGAIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 HMPVIKDLVPDLTNFYAQHASIE-----PW 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM V+KDLVPD+ NFYAQ+ SI+PWL
Sbjct: 112 KIYPLPHMPVIKDLVPDLTNFYAQHASIEPWL 143
>gi|323450717|gb|EGB06597.1| hypothetical protein AURANDRAFT_69875 [Aureococcus anophagefferens]
Length = 280
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 155/253 (61%), Gaps = 55/253 (21%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------KIDA-- 154
+AA S+V + K F IYRW+P+ P +KP Y VDL++ KI A
Sbjct: 25 AAAPFSSVGGQSSENIKYFKIYRWDPEVPGQKPYTSTYPVDLDDCGPMVLDALIKIKAEQ 84
Query: 155 -----------------------------------------NDKVSKIYPLPHMYVVKDL 173
++K I PLPHMYV+KDL
Sbjct: 85 EPGLTFRRSCREGICGSCAMNINGTNTLACLCYITAPGESKSEKPVTINPLPHMYVIKDL 144
Query: 174 VPDMNNFYAQYKSIQPWLQ-RDKENIGNAQ-YLQSLDDRKKLDGLYECILCACCSTSCPS 231
V DM NFY QY+SI+PWL+ +++ ++G + +LQS+ DRKKLDG+YECILCACCSTSCPS
Sbjct: 145 VADMTNFYDQYRSIKPWLRTKEEHDLGKGEEHLQSVVDRKKLDGMYECILCACCSTSCPS 204
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN + YLGPAVLMQAYRWI DSRDE +RL +L D F +YRCHTIMNC++TCPK LN
Sbjct: 205 YWWNADSYLGPAVLMQAYRWIEDSRDEFREERLAELDDAFKLYRCHTIMNCSKTCPKHLN 264
Query: 292 PGRAIAEIKKLLS 304
PG+AI EIKK ++
Sbjct: 265 PGKAIGEIKKAIA 277
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 70/95 (73%), Gaps = 10/95 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-----NDKVSK 55
MVLDALIKIK E +P LTFRRSCREGICGSCAMNI G NTLAC+ I A ++K
Sbjct: 72 MVLDALIKIKAEQEPGLTFRRSCREGICGSCAMNINGTNTLACLCYITAPGESKSEKPVT 131
Query: 56 IYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
I PLPHMYV+KDLV DM NFY QY+SI+ PW
Sbjct: 132 INPLPHMYVIKDLVADMTNFYDQYRSIK-----PW 161
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 325 NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
++K I PLPHMYV+KDLV DM NFY QY+SI+PWL
Sbjct: 126 SEKPVTINPLPHMYVIKDLVADMTNFYDQYRSIKPWL 162
>gi|297805608|ref|XP_002870688.1| succinate dehydrogenase 2-2 [Arabidopsis lyrata subsp. lyrata]
gi|297316524|gb|EFH46947.1| succinate dehydrogenase 2-2 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 144/245 (58%), Gaps = 50/245 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------- 150
S A S A A KTF IYRWNPD P KP +Q+Y++DL +
Sbjct: 33 SEAQSKASTGGGGASLKTFQIYRWNPDNPG-KPELQDYQIDLKDCGPMVLDALIKIKNEM 91
Query: 151 --------------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMN 178
KI++ K + I PLPHM+V+KDLV DM
Sbjct: 92 DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMT 151
Query: 179 NFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
NFY QYKSI+PWL+R + ++ + LQS DR KLDG+YECILCACCSTSCPSYWWN E
Sbjct: 152 NFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE 211
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CPKGLNPG+ I
Sbjct: 212 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIT 271
Query: 298 EIKKL 302
IK+L
Sbjct: 272 HIKQL 276
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI++ K + I PLP
Sbjct: 79 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 139 HMFVIKDLVVDMTNFYNQYKSIE-----PW 163
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI++ K + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 120 ACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
>gi|306842945|ref|ZP_07475579.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella sp. BO2]
gi|306286873|gb|EFM58398.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brucella sp. BO2]
Length = 259
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 147/232 (63%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------ 159
+ F IYRW+PD DE P + Y VD + NKID +
Sbjct: 25 TRVTEFRIYRWSPDD-DENPRIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++LQS +DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPAVL+QAYRW
Sbjct: 144 KTVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNSDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 203 LIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGTIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+NNFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLNNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+NNFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGTIKVYPLPHMPVVKDLVPDLNNFYAQHRSIEPWL 143
>gi|85706754|ref|ZP_01037846.1| succinate dehydrogenase [Roseovarius sp. 217]
gi|85668812|gb|EAQ23681.1| succinate dehydrogenase [Roseovarius sp. 217]
Length = 259
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 151/237 (63%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KP KT F IYRWNPD + P + Y VD++ N+ID
Sbjct: 20 KPEGAKTVRKFQIYRWNPDD-GKNPQVDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRR 78
Query: 156 --------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ S
Sbjct: 79 SCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHAS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I PWL+ K N ++ QS++DR+KLDGLYEC++CACCSTSCPSYWWNG+KYLGPA L+
Sbjct: 139 IMPWLET-KTNAPAKEWKQSIEDREKLDGLYECVMCACCSTSCPSYWWNGDKYLGPAALL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWIIDSRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKK +
Sbjct: 198 HAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAEIKKQM 254
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|255263463|ref|ZP_05342805.1| succinate dehydrogenase iron-sulfur subunit [Thalassiobium sp.
R2A62]
gi|255105798|gb|EET48472.1| succinate dehydrogenase iron-sulfur subunit [Thalassiobium sp.
R2A62]
Length = 259
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVS------------- 159
E +TF IYRWNPD + P + Y VD++ +DA K+
Sbjct: 22 EGATNLRTFHIYRWNPDD-GKNPQVDTYFVDIDTCGPMMLDALIKIKSEIDPTLTFRRSC 80
Query: 160 -------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIGGINTLACLYGLDDVTGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DR+KLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAE+KK++
Sbjct: 200 YRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEVKKMM 254
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 7/108 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+E+DPTLTFRRSCREGICGSCAMNIGG+NTLAC+ +D KIYPLP
Sbjct: 58 MMLDALIKIKSEIDPTLTFRRSCREGICGSCAMNIGGINTLACLYGLDDVTGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSA 108
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQSV 158
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P V Y ID+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGKNPQV--DTYFVDIDTCGPMMLDALIKIKSEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A L+ +D KIYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIGGINTLACLYGLDDVTGDVKIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|407716326|ref|YP_006837606.1| succinate dehydrogenase, iron-sulfur protein [Cycloclasticus sp.
P1]
gi|407256662|gb|AFT67103.1| Succinate dehydrogenase, iron-sulfur protein [Cycloclasticus sp.
P1]
Length = 261
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 123/144 (85%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKD+VPD+ +FYAQY SI+PW+Q + + LQS +DR +LDGLYEC
Sbjct: 112 KIYPLPHMPVVKDIVPDLTHFYAQYASIKPWIQSTTPPPPDKERLQSKEDRAQLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPA+L+QAYRW+ DSRDE +RL++L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLADSRDENAGERLDELEDPFKLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT TCPKGLNP +AIAEIKKLL
Sbjct: 232 MNCTETCPKGLNPAKAIAEIKKLL 255
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIK+E+D TLTFRRSCREGICGSC+MNI G NTLAC I D KIYPLP
Sbjct: 58 MVLDAIIKIKDEVDSTLTFRRSCREGICGSCSMNINGRNTLACTKDIGDIDGPIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKD+VPD+ +FYAQY SI+ PW
Sbjct: 118 HMPVVKDIVPDLTHFYAQYASIK-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K I D KIYPLPHM VVKD+VPD+ +FYAQY SI+PW+
Sbjct: 94 GRNTLACTKDIGDIDGPIKIYPLPHMPVVKDIVPDLTHFYAQYASIKPWI 143
>gi|300024739|ref|YP_003757350.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Hyphomicrobium denitrificans ATCC 51888]
gi|299526560|gb|ADJ25029.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Hyphomicrobium denitrificans ATCC 51888]
Length = 259
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
++ +K F IYRWNPD E P + Y+VD + N+ID
Sbjct: 22 DREGDWKEFRIYRWNPDD-SENPRIDTYQVDRKQCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D + K+YPLPH+ VVKDLVPD+ NFYAQ++SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACLKGMDDIKGPVKVYPLPHLEVVKDLVPDLTNFYAQHRSIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D ++ QS DDR KLDGLYECILCACCSTSCPSYWWN ++YLGPA+L+QA
Sbjct: 141 PWLKTDTAT-PPKEWKQSRDDRSKLDGLYECILCACCSTSCPSYWWNSDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGL+P +AIAE+KKL+
Sbjct: 200 YRWVIDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLSPAKAIAELKKLM 254
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 75/97 (77%), Gaps = 5/97 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +D K+YPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKGMDDIKGPVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
H+ VVKDLVPD+ NFYAQ++SI+ PW T T
Sbjct: 118 HLEVVKDLVPDLTNFYAQHRSIE-----PWLKTDTAT 149
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +D K+YPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 99 ACLKGMDDIKGPVKVYPLPHLEVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|12049600|emb|CAC19856.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Arabidopsis thaliana]
Length = 280
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 143/245 (58%), Gaps = 50/245 (20%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN---------------- 150
S A S A A KTF IYRWNPD P KP +Q+YK+DL +
Sbjct: 33 SEAQSKASTGGGGASLKTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEM 91
Query: 151 --------------------------------KIDANDKVSKIYPLPHMYVVKDLVPDMN 178
KI+ K + I PLPHM+V+KDLV DM
Sbjct: 92 DPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIEFGSKETTITPLPHMFVIKDLVVDMT 151
Query: 179 NFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
NFY QYKSI+PWL+R + ++ + LQS DR KLDG+YECILCACCSTSCPSYWWN E
Sbjct: 152 NFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE 211
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CPKGLNPG+ I
Sbjct: 212 SYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIT 271
Query: 298 EIKKL 302
IK+L
Sbjct: 272 HIKQL 276
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI+ K + I PLP
Sbjct: 79 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIEFGSKETTITPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 139 HMFVIKDLVVDMTNFYNQYKSIE-----PW 163
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI+ K + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 120 ACLTKIEFGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
>gi|260431518|ref|ZP_05785489.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415346|gb|EEX08605.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 259
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRWNPD + P + Y VD++ NKID
Sbjct: 22 EGATNVRKFQIYRWNPDD-GQNPRVDTYFVDMDDCGPMVLDALIYIKNKIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNPPEKEWRQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKLM 254
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIYIKNKIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|163744263|ref|ZP_02151623.1| succinate dehydrogenase iron-sulfur subunit [Oceanibulbus indolifex
HEL-45]
gi|161381081|gb|EDQ05490.1| succinate dehydrogenase iron-sulfur subunit [Oceanibulbus indolifex
HEL-45]
Length = 259
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 145/229 (63%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F +YRWNPD + P + Y VD++ N+ID
Sbjct: 28 REFHVYRWNPDD-GKNPALDTYFVDMDDCGPMILDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 156 ---------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+ V KIYPLPHM VVKDL+PD+ +FYAQ+ SIQPWL+ +
Sbjct: 87 SCAMNIDGINTLACTYGMEEINGVVKIYPLPHMPVVKDLIPDLTHFYAQHASIQPWLETE 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS+DDR KLDGLYECI+CACCSTSCPSYWWNG++YLGPA L+ AYRWIID
Sbjct: 147 TPE-PRKEWKQSIDDRAKLDGLYECIMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP AIA IKKL+
Sbjct: 206 SRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAAAIANIKKLM 254
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLAC ++ + V KIYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACTYGMEEINGVVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SIQ PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIQ-----PW 142
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G++T A + ++ + V KIYPLPHM VVKDL+PD+ +FYAQ+ SIQ
Sbjct: 81 REGICGSCAMNIDGINTLACTYGMEEINGVVKIYPLPHMPVVKDLIPDLTHFYAQHASIQ 140
Query: 359 PWL 361
PWL
Sbjct: 141 PWL 143
>gi|380013984|ref|XP_003691024.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like [Apis florea]
Length = 341
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 154/247 (62%), Gaps = 51/247 (20%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ +T +YRWNP+KP+ KP MQ++ VDLN
Sbjct: 78 RLQTIRVYRWNPEKPNVKPYMQQFSVDLNKCTGTMVLDVLALIKAEYDPTLSYRKSCREG 137
Query: 150 ------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K + K IYPLPH YV++DLV D+ + QYK+I+P+L
Sbjct: 138 ICGCCAMNINGVNNLACITKAMESSKPIVIYPLPHAYVIRDLVTDLEQYLKQYKNIEPFL 197
Query: 192 QRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
+R E+ +G Q LQS DR KL+GLYECILC CC+ +CP YWW G+K+LGP+ L+QAY
Sbjct: 198 KRTGEDNYVGLRQILQSPRDRDKLNGLYECILCGCCTFACPPYWWLGDKFLGPSTLLQAY 257
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
RWIIDSRD +RL +L+D +SVYRCHTI NCT+TCPKGLNPG+A+A+IK+LL+GL +K
Sbjct: 258 RWIIDSRDMGHKERLTKLRDYYSVYRCHTIFNCTKTCPKGLNPGKAVAQIKRLLAGLAQK 317
Query: 310 DKPGLDT 316
++P ++T
Sbjct: 318 ERPDIET 324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 63/86 (73%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK E DPTL++R+SCREGICG CAMNI GVN LACI+K + K IYPLP
Sbjct: 112 MVLDVLALIKAEYDPTLSYRKSCREGICGCCAMNINGVNNLACITKAMESSKPIVIYPLP 171
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YV++DLV D+ + QYK+I+ L
Sbjct: 172 HAYVIRDLVTDLEQYLKQYKNIEPFL 197
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 315 DTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
+ A + K + K IYPLPH YV++DLV D+ + QYK+I+P+L R+
Sbjct: 151 NLACITKAMESSKPIVIYPLPHAYVIRDLVTDLEQYLKQYKNIEPFLKRT 200
>gi|154251889|ref|YP_001412713.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Parvibaculum lavamentivorans DS-1]
gi|154155839|gb|ABS63056.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Parvibaculum lavamentivorans DS-1]
Length = 259
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 150/239 (62%), Gaps = 52/239 (21%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID----- 153
A P K K F +YRW+PD P + Y+VDL+ N+ID
Sbjct: 20 AAPGTK--NVKRFRVYRWSPDD-TANPRIDTYEVDLDKCGPMVLDALIKIKNEIDQTLTF 76
Query: 154 ------------------ANDKVS-----------KIYPLPHMYVVKDLVPDMNNFYAQY 184
AN KIYPLPHM V+KDLVPD+ NFYAQ+
Sbjct: 77 RRSCREGICGSCAMNIDGANTLACTKGIDECKGDVKIYPLPHMPVIKDLVPDLTNFYAQH 136
Query: 185 KSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
I+PWLQ K ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA
Sbjct: 137 AFIEPWLQT-KSAEPEKEWRQSHEDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPAA 195
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRW+IDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 196 LLQAYRWLIDSRDEATGERLDELEDPFRLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC ID KIYPLP
Sbjct: 58 MVLDALIKIKNEIDQTLTFRRSCREGICGSCAMNIDGANTLACTKGIDECKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM V+KDLVPD+ NFYAQ+ I+ PW L T +A+ + ++ S
Sbjct: 118 HMPVIKDLVPDLTNFYAQHAFIE-----PW--LQTKSAEPEKEWRQS 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ID KIYPLPHM V+KDLVPD+ NFYAQ+ I+PWL
Sbjct: 94 GANTLACTKGIDECKGDVKIYPLPHMPVIKDLVPDLTNFYAQHAFIEPWL 143
>gi|254461469|ref|ZP_05074885.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacterales
bacterium HTCC2083]
gi|206678058|gb|EDZ42545.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacteraceae
bacterium HTCC2083]
Length = 259
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------- 150
E + F IYRWNPD + P++ Y VD++N
Sbjct: 22 EGANNIRKFQIYRWNPDD-GKNPSVDTYWVDMDNCGPMILDALIKIKNEIDPTLTFRRSC 80
Query: 151 ----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
ID + ++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIEDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP AIAEIKK++
Sbjct: 200 YRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPALAIAEIKKMM 254
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|148284922|ref|YP_001249012.1| succinate dehydrogenase iron-sulfur subunit [Orientia tsutsugamushi
str. Boryong]
gi|146740361|emb|CAM80794.1| Succinate dehydrogenase iron-sulfur protein [Orientia tsutsugamushi
str. Boryong]
Length = 263
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 124/141 (87%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPHM V+KDLV DM +FYAQY+SI+PWL+ + +I + + LQ+ +DR KLDGLYECI
Sbjct: 115 IYPLPHMSVIKDLVSDMTHFYAQYQSIEPWLKAETIDITSGERLQTPEDRDKLDGLYECI 174
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCST+CPSYWWN +KYLGPAVL+QAYRWIIDSRDE ++RL+QL+D F +YRCHTIM
Sbjct: 175 LCACCSTACPSYWWNADKYLGPAVLLQAYRWIIDSRDEYASERLDQLEDSFKLYRCHTIM 234
Query: 281 NCTRTCPKGLNPGRAIAEIKK 301
NCT+TCPKGLNP +AI+EIKK
Sbjct: 235 NCTKTCPKGLNPAKAISEIKK 255
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 91/158 (57%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNI G N LACI I+ IYPLP
Sbjct: 60 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNINGTNGLACIKAINDIKGDVIIYPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLV DM +FYAQY+SI+ PW T+ + Q
Sbjct: 120 HMSVIKDLVSDMTHFYAQYQSIE-----PWLKAETIDITSGERLQTPEDRDKLDGLYECI 174
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S+A P+ KY A+ YRW D DE
Sbjct: 175 LCACCSTACPSYWWNADKYLGPAVLLQAYRWIIDSRDE 212
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLV DM +FYAQY+SI+PWL
Sbjct: 115 IYPLPHMSVIKDLVSDMTHFYAQYQSIEPWL 145
>gi|126730324|ref|ZP_01746135.1| succinate dehydrogenase catalytic subunit [Sagittula stellata E-37]
gi|126709057|gb|EBA08112.1| succinate dehydrogenase catalytic subunit [Sagittula stellata E-37]
Length = 260
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/154 (68%), Positives = 131/154 (85%), Gaps = 3/154 (1%)
Query: 150 NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDD 209
++ID ++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+ K N ++ QS++D
Sbjct: 105 DEIDGDE--VKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLET-KTNRPAKEWRQSIED 161
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
RKKLDGLYEC++CA CSTSCPSYWWNG+KYLGPA L+ AYRWIIDSRDE T +RL+QL+D
Sbjct: 162 RKKLDGLYECVMCASCSTSCPSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDQLED 221
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
PF +YRCHTIMNCT+TCPKGLNP +AIAEIKK++
Sbjct: 222 PFKLYRCHTIMNCTKTCPKGLNPAKAIAEIKKMM 255
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 81/108 (75%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D D KIYPL
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIDGDEVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PHM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 PHMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWRQS 158
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 6/53 (11%)
Query: 313 GLDTAA----LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID ++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEIDGDE--VKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 144
>gi|307136313|gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]
Length = 277
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 153/267 (57%), Gaps = 56/267 (20%)
Query: 91 KILGTLTAKNIRSF-QLSAAASSAVP------AEKPAKYKTFAIYRWNPDKPDEKPTMQE 143
++L ++A + F ++ A AS A A + KTFAIYRWNPD P KP +QE
Sbjct: 8 RVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS-KPELQE 66
Query: 144 YKVDLN--------------NKIDAN---------------------------------D 156
YK+DL N+ID +
Sbjct: 67 YKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSG 126
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKEN-IGNAQYLQSLDDRKKLDG 215
S I PLPHM+V+KDLV DM NFY QYKSI+PWL+R E + + LQS DR KLDG
Sbjct: 127 DSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDG 186
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE T +RL + D F +YR
Sbjct: 187 MYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYR 246
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKL 302
CHTI+NC R CPKGLNPG+ I IK L
Sbjct: 247 CHTILNCARACPKGLNPGKQIQHIKSL 273
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI G N LAC++KI + D S I PLP
Sbjct: 77 MVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGDS-STITPLP 135
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 136 HMFVIKDLVVDMTNFYNQYKSIE-----PW 160
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + D S I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 118 ACLTKIPSGDS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 163
>gi|254448793|ref|ZP_05062250.1| succinate dehydrogenase iron-sulfur protein [gamma proteobacterium
HTCC5015]
gi|198261634|gb|EDY85922.1| succinate dehydrogenase iron-sulfur protein [gamma proteobacterium
HTCC5015]
Length = 259
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/144 (73%), Positives = 122/144 (84%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDLVPD+ NFYAQ +S+ P+L + K + LQ+ DR +LDGLYEC
Sbjct: 112 KIYPLPHMPVVKDLVPDLTNFYAQLRSVDPFL-KTKSQAPTRERLQTEADRAQLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVLMQAYRWIIDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLMQAYRWIIDSRDEATGERLDALEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP RAIAEIKK+L
Sbjct: 231 MNCAKTCPKGLNPARAIAEIKKML 254
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 68/86 (79%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNEMDPTLT RRSCREGICGSCAMNI G NTLAC I+ KIYPLP
Sbjct: 58 MVLDALLKIKNEMDPTLTLRRSCREGICGSCAMNIDGTNTLACTKAIEDVKGTVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ NFYAQ +S+ L
Sbjct: 118 HMPVVKDLVPDLTNFYAQLRSVDPFL 143
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K I+ KIYPLPHM VVKDLVPD+ NFYAQ +S+ P+L
Sbjct: 94 GTNTLACTKAIEDVKGTVKIYPLPHMPVVKDLVPDLTNFYAQLRSVDPFL 143
>gi|449455896|ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
2, mitochondrial-like [Cucumis sativus]
gi|449492901|ref|XP_004159135.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
2, mitochondrial-like [Cucumis sativus]
Length = 277
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 148/255 (58%), Gaps = 55/255 (21%)
Query: 102 RSFQLSAAASSAVP------AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
R ++ A AS A A + KTFAIYRWNPD P KP +QEYK+DL
Sbjct: 20 RFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS-KPELQEYKIDLKECGPMV 78
Query: 150 --------NKID---------------------------------ANDKVSKIYPLPHMY 168
N+ID ++ S I PLPHM+
Sbjct: 79 LDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGDSSTITPLPHMF 138
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQRDKEN-IGNAQYLQSLDDRKKLDGLYECILCACCST 227
V+KDLV DM NFY QYKSI+PWL+R E + + LQS DR KLDG+YECILCACCST
Sbjct: 139 VIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKDRAKLDGMYECILCACCST 198
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWWN E YLGPA L+ A RWI DSRDE T +RL+ + D F +YRCHTI+NC R CP
Sbjct: 199 SCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACP 258
Query: 288 KGLNPGRAIAEIKKL 302
KGLNPG+ I IK L
Sbjct: 259 KGLNPGKQIQNIKGL 273
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI G N LAC++KI + D S I PLP
Sbjct: 77 MVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGDS-STITPLP 135
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 136 HMFVIKDLVVDMTNFYNQYKSIE-----PW 160
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + D S I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 118 ACLTKISSGDS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 163
>gi|418053703|ref|ZP_12691759.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Hyphomicrobium denitrificans 1NES1]
gi|353211328|gb|EHB76728.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Hyphomicrobium denitrificans 1NES1]
Length = 259
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 149/236 (63%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
A +K F IYRWNPD D P + Y++D N N+ID
Sbjct: 21 ANHEGDWKEFRIYRWNPDDSD-NPRIDTYQIDKNQCGPMVLDALIKIKNEIDPTLTFRRS 79
Query: 156 -------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D ++ KIYPLPH+ VVKDLVPD+ NFYAQ++SI
Sbjct: 80 CREGICGSCAMNIDGTNTLACLKGIDDIAGPVKIYPLPHLEVVKDLVPDLTNFYAQHRSI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWL+ D ++ QS +DR KLDGLYECILCACCSTSCPSYWWN ++YLGPA+L+Q
Sbjct: 140 EPWLKTDTPT-PPKEWKQSREDRSKLDGLYECILCACCSTSCPSYWWNSDRYLGPAILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGL+P +AIAE+KKL+
Sbjct: 199 AYRWVIDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLSPAKAIAELKKLM 254
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ ID KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKGIDDIAGPVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLEVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN + G + YRW D D D K+ ++ L
Sbjct: 18 WNQANHEGDWKEFRIYRWNPDDSDNPRIDTYQIDKNQCGPMVLDALIKIKNEIDPTLTFR 77
Query: 294 RAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYA 352
R+ E + G + G +T A L ID KIYPLPH+ VVKDLVPD+ NFYA
Sbjct: 78 RSCRE---GICGSCAMNIDGTNTLACLKGIDDIAGPVKIYPLPHLEVVKDLVPDLTNFYA 134
Query: 353 QYKSIQPWL 361
Q++SI+PWL
Sbjct: 135 QHRSIEPWL 143
>gi|58584857|ref|YP_198430.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419173|gb|AAW71188.1| Succinate dehydrogenase Fe-S protein, SdhB [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 262
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 124/144 (86%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHMYV+KDLV D++ FY QYKS+ PWLQ DK N+ N +Y QS +DRKKLDGL +C
Sbjct: 113 KIYPLPHMYVIKDLVSDLSQFYEQYKSVNPWLQADKPNLLNQEYSQSPEDRKKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST CP+YWWN +K+LGPA+L+QAYRWI DSRD KT +RL+ L DPF +YRCHTI
Sbjct: 173 ILCACCSTGCPNYWWNNDKFLGPAILLQAYRWIADSRDNKTDERLDALNDPFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
M+CT+TCPKGLNP +AIA+IK+L+
Sbjct: 233 MSCTKTCPKGLNPAKAIAKIKQLM 256
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+DPTLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKDEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKSIPDIKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYV+KDLV D++ FY QYKS+ PW
Sbjct: 119 HMYVIKDLVSDLSQFYEQYKSV-----NPW 143
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHMYV+KDLV D++ FY QYKS+ PWL
Sbjct: 113 KIYPLPHMYVIKDLVSDLSQFYEQYKSVNPWL 144
>gi|153008289|ref|YP_001369504.1| succinate dehydrogenase iron-sulfur subunit [Ochrobactrum anthropi
ATCC 49188]
gi|404316612|ref|ZP_10964545.1| succinate dehydrogenase iron-sulfur subunit [Ochrobactrum anthropi
CTS-325]
gi|151560177|gb|ABS13675.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Ochrobactrum anthropi ATCC 49188]
Length = 259
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 147/231 (63%), Gaps = 50/231 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS------- 159
+ F IYRW+PD D P++ Y VD + NKID +
Sbjct: 26 RVTEFRIYRWSPDD-DANPSIDTYYVDRDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84
Query: 160 ---------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL+
Sbjct: 85 CGSCAMNIDGANTLACTKGMDDIKGAIKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLK 144
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
++LQS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+
Sbjct: 145 TVSPE-PQKEWLQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWL 203
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 204 IDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDIKGAIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGMDDIKGAIKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|402219507|gb|EJT99580.1| succinate dehydrogenase iron-sulfur subunit [Dacryopinax sp.
DJM-731 SS1]
Length = 233
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 145/232 (62%), Gaps = 50/232 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
K F IYRW+PD P +KPT+Q Y +DL+ N++D
Sbjct: 2 KEFKIYRWDPDTPAQKPTLQSYTIDLSQSGPMILDALIKIKNEMDPTLTFRRSCREGICG 61
Query: 156 ----------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
K +KIYPLPH+Y+VKDLVPD+ FY QYKS++PWL+
Sbjct: 62 SCAMNIDGVNTLACLCRIDRDQSKTTKIYPLPHLYIVKDLVPDLTQFYQQYKSVEPWLKN 121
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D G ++LQS++DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPA L+ YRW++
Sbjct: 122 DNPPDGT-EHLQSIEDRRKLDGLYECILCACCSTSCPSYWWNQDEYLGPAALLATYRWLV 180
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRD A+R +L++ S+YRCHTI NC+RTCPKGLNP AIA IK L+
Sbjct: 181 DSRDTAKAERKEKLQNEMSLYRCHTIFNCSRTCPKGLNPADAIARIKLQLAA 232
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 102/168 (60%), Gaps = 18/168 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNEMDPTLTFRRSCREGICGSCAMNI GVNTLAC+ +ID + K +KIYPL
Sbjct: 33 MILDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIDRDQSKTTKIYPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ---------LSAAA 110
PH+Y+VKDLVPD+ FY QYKS++ L GT ++I + L A
Sbjct: 93 PHLYIVKDLVPDLTQFYQQYKSVEPWLKNDNPPDGTEHLQSIEDRRKLDGLYECILCACC 152
Query: 111 SSAVPA------EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
S++ P+ E A YRW D D E K L N++
Sbjct: 153 STSCPSYWWNQDEYLGPAALLATYRWLVDSRDTAKA--ERKEKLQNEM 198
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +ID + K +KIYPLPH+Y+VKDLVPD+ FY QYKS++PWL
Sbjct: 69 GVNTLACLCRIDRDQSKTTKIYPLPHLYIVKDLVPDLTQFYQQYKSVEPWL 119
>gi|405381065|ref|ZP_11034898.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF142]
gi|397322533|gb|EJJ26938.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF142]
Length = 259
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 151/237 (63%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KPA K F +YRW+PD + P++ + VD++ NKID
Sbjct: 20 KPAGAKNTREFRVYRWSPDD-GQNPSIDTFYVDVDDCGPMVLDALLYIKNKIDPTLTLRR 78
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
KIYPLPHM VVKDLVPD++NFYAQ++S
Sbjct: 79 SCREGICGSCAMNIDGTNTLACTKGMDDIKGTVKIYPLPHMPVVKDLVPDLSNFYAQHRS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL+ ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+
Sbjct: 139 IEPWLKTVSPTPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 198 QAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDALLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDIKGTVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDDIKGTVKIYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|374328956|ref|YP_005079140.1| succinate dehydrogenase iron-sulfur subunit [Pseudovibrio sp.
FO-BEG1]
gi|359341744|gb|AEV35118.1| Succinate dehydrogenase iron-sulfur subunit [Pseudovibrio sp.
FO-BEG1]
Length = 260
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
+ + ++ KIYPLPHM VVKDLVPD+ FYAQ++SI+PWL+ ++LQS +DR+K
Sbjct: 106 ECSHEIVKIYPLPHMPVVKDLVPDLTRFYAQHRSIEPWLKTTTPE-PEKEWLQSYEDRQK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWNG++YLGPA+L+QAYRW+IDSRDE T +RL+ L+DPF
Sbjct: 165 LDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC++ CPKGLNP +AIAEIKK++
Sbjct: 225 LYRCHTIMNCSQACPKGLNPAKAIAEIKKMM 255
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 72/91 (79%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALI IK+++DPTLTFRRSCREGICGSCAMNI G NTLAC D + ++ KIYPL
Sbjct: 58 MVLDALIYIKDKVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGADECSHEIVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ FYAQ++SI+ PW
Sbjct: 118 PHMPVVKDLVPDLTRFYAQHRSIE-----PW 143
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 300 KKLLSGLVKKDKPGLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 357
++ + G + G +T A K + + ++ KIYPLPHM VVKDLVPD+ FYAQ++SI
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGADECSHEIVKIYPLPHMPVVKDLVPDLTRFYAQHRSI 140
Query: 358 QPWL 361
+PWL
Sbjct: 141 EPWL 144
>gi|254470662|ref|ZP_05084065.1| succinate dehydrogenase, iron-sulfur protein [Pseudovibrio sp.
JE062]
gi|211959804|gb|EEA95001.1| succinate dehydrogenase, iron-sulfur protein [Pseudovibrio sp.
JE062]
Length = 260
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
+ + ++ KIYPLPHM VVKDLVPD+ FYAQ++SI+PWL+ ++LQS +DR+K
Sbjct: 106 ECSHEIVKIYPLPHMPVVKDLVPDLTRFYAQHRSIEPWLKTTTPE-PEKEWLQSYEDRQK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWNG++YLGPA+L+QAYRW+IDSRDE T +RL+ L+DPF
Sbjct: 165 LDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC++ CPKGLNP +AIAEIKK++
Sbjct: 225 LYRCHTIMNCSQACPKGLNPAKAIAEIKKMM 255
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 72/91 (79%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALI IK+++DPTLTFRRSCREGICGSCAMNI G NTLAC D + ++ KIYPL
Sbjct: 58 MVLDALIYIKDKVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGADECSHEIVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ FYAQ++SI+ PW
Sbjct: 118 PHMPVVKDLVPDLTRFYAQHRSIE-----PW 143
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K + + ++ KIYPLPHM VVKDLVPD+ FYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGADECSHEIVKIYPLPHMPVVKDLVPDLTRFYAQHRSIEPWL 144
>gi|159045401|ref|YP_001534195.1| succinate dehydrogenase iron-sulfur subunit [Dinoroseobacter shibae
DFL 12]
gi|157913161|gb|ABV94594.1| succinate dehydrogenase [Dinoroseobacter shibae DFL 12]
Length = 259
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F +YRWNPD E P + Y VD++ N+ID
Sbjct: 22 EGATNLRKFQVYRWNPDD-GENPRVDTYWVDMDTCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ S+
Sbjct: 81 REGICGSCAMNIDGANTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASVM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS+DDRKKLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPATEWRQSIDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AI IKK++
Sbjct: 200 YRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIGAIKKMM 254
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGANTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ S+ PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASVM-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ S+ PWL
Sbjct: 99 ACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASVMPWL 143
>gi|56695276|ref|YP_165624.1| succinate dehydrogenase iron-sulfur subunit [Ruegeria pomeroyi
DSS-3]
gi|56677013|gb|AAV93679.1| succinate dehydrogenase, iron-sulfur protein [Ruegeria pomeroyi
DSS-3]
Length = 259
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRWNPD + P + Y VD++ NK+DA
Sbjct: 22 EGATNLRKFQIYRWNPDD-GQNPRVDTYFVDMDDCGPMVLDALIYIKNKVDATLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DR+KLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIEDRRKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWIIDSRDEATGERLDNLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++D TLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIYIKNKVDATLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|374293174|ref|YP_005040209.1| Succinate dehydrogenase, Fe-S subunit [Azospirillum lipoferum 4B]
gi|357425113|emb|CBS87996.1| Succinate dehydrogenase, Fe-S subunit [Azospirillum lipoferum 4B]
Length = 258
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 150/236 (63%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
A + K+F IYRWNPD + P + Y VDL+ N++D+
Sbjct: 21 ANGAKRAKSFKIYRWNPDD-GQNPRVDTYVVDLDKFGPMILDAIIYIKNQVDSTLTFRRS 79
Query: 156 -------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D+V KIYPLPHM VVKDLVPD+ + YAQ SI
Sbjct: 80 CREGICGSCAMNIDGTNTLACLKAIDEVPGDVKIYPLPHMPVVKDLVPDLKHIYAQLASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + + + LQS +DR KLDGLYECILC CCSTSCPSYWWNG++YLGP++L+Q
Sbjct: 140 KPWLQ-SQSPAPSRERLQSPEDRAKLDGLYECILCFCCSTSCPSYWWNGDRYLGPSILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIVDSRDEMTGERLDNLEDPFRLYRCHTIMNCTKACPKGLNPAKAIAEIKKLM 254
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDA+I IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ ID KIYPLP
Sbjct: 58 MILDAIIYIKNQVDSTLTFRRSCREGICGSCAMNIDGTNTLACLKAIDEVPGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ + YAQ SI+ PW
Sbjct: 118 HMPVVKDLVPDLKHIYAQLASIK-----PW 142
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L ID KIYPLPHM VVKDLVPD+ + YAQ SI+PWL
Sbjct: 99 ACLKAIDEVPGDVKIYPLPHMPVVKDLVPDLKHIYAQLASIKPWL 143
>gi|307942787|ref|ZP_07658132.1| succinate dehydrogenase iron-sulfur subunit [Roseibium sp.
TrichSKD4]
gi|307773583|gb|EFO32799.1| succinate dehydrogenase iron-sulfur subunit [Roseibium sp.
TrichSKD4]
Length = 260
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 148/235 (62%), Gaps = 49/235 (20%)
Query: 117 EKPAKYKTFAIYRWNP-------------DKPDEKPTMQEYKVDLNNKID---------- 153
E + + IYRWNP DK D P + + + + NKID
Sbjct: 22 EGASNLTEYRIYRWNPEDGRNPRVDTYFVDKDDCGPMVLDGLIYIKNKIDPTLTFRRSCR 81
Query: 154 ---------------------ANDKVS----KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V+ KIYPLPHM VVKDLVPDM FYAQ++SI+
Sbjct: 82 EGICGSCAMNIDGTNTLACTKGTDEVAGDVVKIYPLPHMPVVKDLVPDMTRFYAQHRSIE 141
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPA+L+QA
Sbjct: 142 PWLKTTTPT-PEKEWRQSHEDRSKLDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC++ CPKGLNP +AIAEIKK+L
Sbjct: 201 YRWLIDSRDEATGERLDDLEDPFRLYRCHTIMNCSQACPKGLNPAKAIAEIKKML 255
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 71/92 (77%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC D A D V KIYP
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGTDEVAGD-VVKIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM VVKDLVPDM FYAQ++SI+ PW
Sbjct: 117 LPHMPVVKDLVPDMTRFYAQHRSIE-----PW 143
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V KIYPLPHM VVKDLVPDM FYAQ++SI+PWL
Sbjct: 111 VVKIYPLPHMPVVKDLVPDMTRFYAQHRSIEPWL 144
>gi|386814558|ref|ZP_10101776.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Thiothrix nivea DSM 5205]
gi|386419134|gb|EIJ32969.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Thiothrix nivea DSM 5205]
Length = 259
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 125/150 (83%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
IDA D +I PLPHM VVKDLVPD+ +FYAQY SI+PW+Q + ++LQS +DRK
Sbjct: 104 IDAFDGDIQISPLPHMAVVKDLVPDLTHFYAQYASIKPWMQTKTPAPPDREHLQSPEDRK 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCA CSTSCPSYWWN ++YLGPAVL+QAYRW++DSRDE T +RL+ L+DPF
Sbjct: 164 KLDGLYECILCASCSTSCPSYWWNSDRYLGPAVLLQAYRWVVDSRDEATGERLDNLEDPF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
+YRCHTIMNCT TCPKGLNP +AIAE+KK
Sbjct: 224 RLYRCHTIMNCTNTCPKGLNPAKAIAELKK 253
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 74/90 (82%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+DP+LTFRRSCREGICGSC+MNIGG NTLACI IDA D +I PLP
Sbjct: 58 MVLDALLKIKNEIDPSLTFRRSCREGICGSCSMNIGGTNTLACIKAIDAFDGDIQISPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ +FYAQY SI+ PW
Sbjct: 118 HMAVVKDLVPDLTHFYAQYASIK-----PW 142
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + IDA D +I PLPHM VVKDLVPD+ +FYAQY SI+PW+
Sbjct: 99 ACIKAIDAFDGDIQISPLPHMAVVKDLVPDLTHFYAQYASIKPWM 143
>gi|222150045|ref|YP_002551002.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium vitis
S4]
gi|221737027|gb|ACM37990.1| succinate dehydrogenase iron-sulfur [Agrobacterium vitis S4]
Length = 259
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 149/229 (65%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID--------------- 153
+ + IYRW+PD D+ P++ Y VD++ NKID
Sbjct: 28 REYQIYRWSPDD-DKNPSLDTYYVDMDDCGPMVLDGLLYIKNKIDPTLTFRRSCREGICG 86
Query: 154 ----------------ANDKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D+V K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL +
Sbjct: 87 SCAMNIDGTNTLACTKGTDEVKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL-KT 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS DDR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 146 VSPTPVKEWKQSHDDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEAKGERLDNLEDPFRLYRCHTIMNCAQVCPKGLNPAKAIAEIKKMM 254
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGTDEVKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDLVPD+ NFYAQ++SI+ PW L T++ ++ ++ S
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PW--LKTVSPTPVKEWKQS 157
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGTDEVKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|335424927|ref|ZP_08553920.1| succinate dehydrogenase iron-sulfur subunit [Salinisphaera
shabanensis E1L3A]
gi|334887058|gb|EGM25397.1| succinate dehydrogenase iron-sulfur subunit [Salinisphaera
shabanensis E1L3A]
Length = 259
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E KTF IYRW P+ E P + + +DL+ N+ID
Sbjct: 22 EGAKNVKTFRIYRWEPES-GENPRVDSFAIDLDKCGPMVLDAVIKIKNEIDPTLTFRRSC 80
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D +IYPLPHM VVKDLVPD+ +FYAQ +SI+
Sbjct: 81 REGICGSCAFNIDGKNTLACTTRITDIDGDVRIYPLPHMPVVKDLVPDLTHFYAQLESIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PW++ D + LQ+ +DR KLDGLYECILCACCST+CPSYWWN E+YLGPAVL+QA
Sbjct: 141 PWIKTDTPK-PTRERLQTPEDRAKLDGLYECILCACCSTACPSYWWNPERYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI+DSRDE T DRL+ L+DPF +YRCHTIMNCT TCPKGLNP +AI E KKLL
Sbjct: 200 YRWIVDSRDEATGDRLDDLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIQETKKLL 254
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 95/159 (59%), Gaps = 29/159 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE+DPTLTFRRSCREGICGSCA NI G NTLAC ++I D +IYPLP
Sbjct: 58 MVLDAVIKIKNEIDPTLTFRRSCREGICGSCAFNIDGKNTLACTTRITDIDGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPD+ +FYAQ +SI+ PW + T T K R
Sbjct: 118 HMPVVKDLVPDLTHFYAQLESIE-----PW--IKTDTPKPTRERLQTPEDRAKLDGLYEC 170
Query: 106 -LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S+A P+ P +Y A+ YRW D DE
Sbjct: 171 ILCACCSTACPSYWWNPERYLGPAVLLQAYRWIVDSRDE 209
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A +I D +IYPLPHM VVKDLVPD+ +FYAQ +SI+PW+
Sbjct: 99 ACTTRITDIDGDVRIYPLPHMPVVKDLVPDLTHFYAQLESIEPWI 143
>gi|409439371|ref|ZP_11266420.1| succinate dehydrogenase, Fe-S protein [Rhizobium mesoamericanum
STM3625]
gi|408748747|emb|CCM77601.1| succinate dehydrogenase, Fe-S protein [Rhizobium mesoamericanum
STM3625]
Length = 259
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 150/229 (65%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F +YRW+PD + P++ + +D++ NKID
Sbjct: 28 REFRVYRWSPDD-GQNPSIDTFYIDVDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++ KIYPLPHM VVKDLVPD+ NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMDEIKGSVKIYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPTPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEIKGSVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEIKGSVKIYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|288957017|ref|YP_003447358.1| succinate dehydrogenase iron-sulfur protein [Azospirillum sp. B510]
gi|288909325|dbj|BAI70814.1| succinate dehydrogenase iron-sulfur protein [Azospirillum sp. B510]
Length = 258
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 149/236 (63%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
A + KTF IYRWNPD + P + Y VDL+ N++D+
Sbjct: 21 ANGAKRAKTFKIYRWNPDD-GQNPRVDSYVVDLDKFGPMILDAIIYIKNQVDSTLTFRRS 79
Query: 156 -------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D+V KIYPLPHM VVKDLVPD+ + YAQ SI
Sbjct: 80 CREGICGSCAMNIDGTNTLACLKAIDEVPGDVKIYPLPHMPVVKDLVPDLKHIYAQLASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + + + LQS +DR KLDGLYECILC CCSTSCPSYWWNG++YLGP++L+Q
Sbjct: 140 KPWLQ-TQSPAPSRERLQSPEDRAKLDGLYECILCFCCSTSCPSYWWNGDRYLGPSILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI DSRDE T +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIADSRDEMTGERLDNLEDPFRLYRCHTIMNCTKACPKGLNPAKAIAEIKKLM 254
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDA+I IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ ID KIYPLP
Sbjct: 58 MILDAIIYIKNQVDSTLTFRRSCREGICGSCAMNIDGTNTLACLKAIDEVPGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ + YAQ SI+ PW
Sbjct: 118 HMPVVKDLVPDLKHIYAQLASIK-----PW 142
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L ID KIYPLPHM VVKDLVPD+ + YAQ SI+PWL
Sbjct: 99 ACLKAIDEVPGDVKIYPLPHMPVVKDLVPDLKHIYAQLASIKPWL 143
>gi|398827910|ref|ZP_10586113.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Phyllobacterium sp. YR531]
gi|398219208|gb|EJN05705.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Phyllobacterium sp. YR531]
Length = 259
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 149/229 (65%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ + IYRW+PD E P + Y VDL+ NKID
Sbjct: 28 REYRIYRWSPDD-GENPRIDTYYVDLDDCGPMVLDGLLWIKNKIDPTLTLRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++ KIYPLPH+ VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMDEIKGAVKIYPLPHLPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++LQS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPEPAK-EWLQSHEDRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 206 SRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLWIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEIKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEIKGAVKIYPLPHLPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|190893743|ref|YP_001980285.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli CIAT
652]
gi|190699022|gb|ACE93107.1| succinate dehydrogenase protein, iron-sulfur subunit [Rhizobium
etli CIAT 652]
Length = 259
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAQ-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDIKGAVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|126740502|ref|ZP_01756189.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter sp.
SK209-2-6]
gi|126718303|gb|EBA15018.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter sp.
SK209-2-6]
Length = 259
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 148/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------KIDAN------------- 155
+ F IYRWNPD + P++ Y VD++N +ID
Sbjct: 28 RKFKIYRWNPDD-GKNPSVDTYFVDMDNCGPMILDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D+V KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+
Sbjct: 87 SCAMNIGGINTLACIYGMDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLET- 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG+KYLGPA L+ AYRWIID
Sbjct: 146 KTNAPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDKYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+QL+DPF +YRCHTIMNCT+TCPKGLNP +AIA IK ++
Sbjct: 206 SRDEATPERLDQLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAHIKHMM 254
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG+NTLACI +D KIYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGINTLACIYGMDEVKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P+V Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGKNPSV--DTYFVDMDNCGPMILDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D KIYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIGGINTLACIYGMDEVKGDVKIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|149201366|ref|ZP_01878341.1| succinate dehydrogenase iron-sulfur subunit [Roseovarius sp.
TM1035]
gi|149145699|gb|EDM33725.1| succinate dehydrogenase iron-sulfur subunit [Roseovarius sp.
TM1035]
Length = 259
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 151/237 (63%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KP KT F IYRWNPD + P + Y VD++ N+ID
Sbjct: 20 KPEGAKTVRKFQIYRWNPDD-GKNPRVDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRR 78
Query: 156 --------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ S
Sbjct: 79 SCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHAS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I PWL+ K N ++ QS++DR+KLDGLYEC++CA CSTSCPSYWWNG+KYLGPA L+
Sbjct: 139 IMPWLET-KTNRPAKEWRQSIEDREKLDGLYECVMCASCSTSCPSYWWNGDKYLGPAALL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWIIDSRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKK++
Sbjct: 198 HAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAEIKKMM 254
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWRQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|8954361|ref|NP_059350.1| succinate dehydrogenase iron-sulfur protein [Cyanidioschyzon
merolae]
gi|3927865|dbj|BAA34653.1| succinate dehydrogenase iron-sulfur protein [Cyanidioschyzon
merolae strain 10D]
Length = 265
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 140/232 (60%), Gaps = 49/232 (21%)
Query: 122 YKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------- 150
Y+ F IYRWNP + P + Y V +NN
Sbjct: 28 YRVFRIYRWNPSIM-KNPWINSYIVSMNNCGPIVLDALIKIKNEQDSTLTFRRSCREGIC 86
Query: 151 -----------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
K+ + + IYPLPH+YV+KDLVPD+ NFY Q+KSIQPWLQ
Sbjct: 87 GSCAINIIGKNTLACLYKLSDSSRFIHIYPLPHIYVIKDLVPDLTNFYTQHKSIQPWLQP 146
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+++ +++QS +R LDGLYECILCACCS SCPSYWWNG++YLGPA+L+QAYRWII
Sbjct: 147 NRDYSLQKEFIQSKQERSYLDGLYECILCACCSASCPSYWWNGDRYLGPAILLQAYRWII 206
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRD T RL L D + VYRCHTIMNCT+TCPK LNPG+AIA IK LL G
Sbjct: 207 DSRDSATEKRLGYLNDSYKVYRCHTIMNCTKTCPKHLNPGKAIANIKILLKG 258
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
+VLDALIKIKNE D TLTFRRSCREGICGSCA+NI G NTLAC+ K+ + + IYPLP
Sbjct: 59 IVLDALIKIKNEQDSTLTFRRSCREGICGSCAINIIGKNTLACLYKLSDSSRFIHIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+YV+KDLVPD+ NFY Q+KSIQ PW
Sbjct: 119 HIYVIKDLVPDLTNFYTQHKSIQ-----PW 143
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L+K+ + + IYPLPH+YV+KDLVPD+ NFY Q+KSIQPWL
Sbjct: 100 ACLYKLSDSSRFIHIYPLPHIYVIKDLVPDLTNFYTQHKSIQPWL 144
>gi|392950948|ref|ZP_10316503.1| succinate dehydrogenase iron-sulfur protein [Hydrocarboniphaga
effusa AP103]
gi|391859910|gb|EIT70438.1| succinate dehydrogenase iron-sulfur protein [Hydrocarboniphaga
effusa AP103]
Length = 261
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 147/231 (63%), Gaps = 50/231 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------NNKIDAN----------- 155
K ++F IYR++PD P + Y +D+ N+ID
Sbjct: 28 KVRSFKIYRYDPDT-GANPRVDTYDIDMAACGPMVLDALIKIKNEIDPTLTFRRSCREGI 86
Query: 156 --------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
D++S KIYPLPHM VVKDLVPD+ +FYAQ S++PWL+
Sbjct: 87 CGSCAMNIDGTNTLACTKGCDEISGDVKIYPLPHMPVVKDLVPDLTHFYAQLASVEPWLK 146
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D + LQS ++R KLDGLYECILCACCSTSCPSYWWNG++YLGPA+L+QAYRW+
Sbjct: 147 TDSP-APTRERLQSEEERAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWL 205
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRDE T DRL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAE KK+L
Sbjct: 206 ADSRDEATGDRLDALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAETKKML 256
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC D KIYPLP
Sbjct: 60 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGCDEISGDVKIYPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ +FYAQ S++ PW
Sbjct: 120 HMPVVKDLVPDLTHFYAQLASVE-----PW 144
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Query: 313 GLDTAALHKIDANDKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D++S KIYPLPHM VVKDLVPD+ +FYAQ S++PWL
Sbjct: 96 GTNTLACTK--GCDEISGDVKIYPLPHMPVVKDLVPDLTHFYAQLASVEPWL 145
>gi|417109586|ref|ZP_11963267.1| succinate dehydrogenase protein, iron-sulfur subunit [Rhizobium
etli CNPAF512]
gi|327188892|gb|EGE56084.1| succinate dehydrogenase protein, iron-sulfur subunit [Rhizobium
etli CNPAF512]
Length = 259
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDIKGAVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|344923088|ref|ZP_08776549.1| succinate dehydrogenase iron-sulfur subunit [Candidatus Odyssella
thessalonicensis L13]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 144/232 (62%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
+ +TF IYRWNPD D+ P + Y +DL
Sbjct: 25 SSIRTFQIYRWNPDD-DQNPRIDSYDIDLEECGPMVLDALIKIKNEVDTTLTFRRSCREG 83
Query: 151 -------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
ID + ++ KIYPLPHM VVKDLVPD++ YAQY SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACIKPISEVKGEVKIYPLPHMNVVKDLVPDLSMAYAQYASIKPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q D +G + LQS +DR KLDGL+ECILC C+TSCPSYWWNG+KYLGPA L+Q+YRW
Sbjct: 144 QSDAP-VGERERLQSEEDRAKLDGLWECILCFSCTTSCPSYWWNGDKYLGPAALLQSYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I DSRD+ T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI EIKK +
Sbjct: 203 IADSRDDHTGERLDALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGEIKKQM 254
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI I KIYPLP
Sbjct: 58 MVLDALIKIKNEVDTTLTFRRSCREGICGSCAMNIDGTNTLACIKPISEVKGEVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++ YAQY SI+ PW
Sbjct: 118 HMNVVKDLVPDLSMAYAQYASIK-----PW 142
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPD++ YAQY SI+PWL
Sbjct: 112 KIYPLPHMNVVKDLVPDLSMAYAQYASIKPWL 143
>gi|339504577|ref|YP_004691997.1| succinate dehydrogenase iron-sulfur subunit SdhB [Roseobacter
litoralis Och 149]
gi|338758570|gb|AEI95034.1| succinate dehydrogenase iron-sulfur subunit SdhB [Roseobacter
litoralis Och 149]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F+IYRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGATDLRKFSIYRWNPDD-GQNPRLDTYFVDMDTCGPMILDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V +IYPLPHM VVKDL+PD+ +FYAQ+ S
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEVKGDVRIYPLPHMPVVKDLIPDLTHFYAQHASTM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS+DDRKKLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP AIA IKK++
Sbjct: 200 YRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAEAIANIKKMM 254
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D +IYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ S PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASTM-----PW--LETKTNRPAKEWKQS 157
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D +IYPLPHM VVKDL+PD+ +FYAQ+ S PWL
Sbjct: 94 GINTLACIYGMDEVKGDVRIYPLPHMPVVKDLIPDLTHFYAQHASTMPWL 143
>gi|392383578|ref|YP_005032775.1| succinate dehydrogenase, Fe-S subunit [Azospirillum brasilense
Sp245]
gi|356878543|emb|CCC99428.1| succinate dehydrogenase, Fe-S subunit [Azospirillum brasilense
Sp245]
Length = 258
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 147/236 (62%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A + KTF IYRW+PD + P + Y VDL+
Sbjct: 21 ASGAKRAKTFKIYRWSPDD-GQNPRVDTYVVDLDKFGPMILDAIIYIKNNIDSTLTFRRS 79
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ KIYPLPHM VVKDLVPD+ + YAQ SI
Sbjct: 80 CREGICGSCAMNIDGTNTLACLKAIEEVKGDVKIYPLPHMPVVKDLVPDLKHIYAQLASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + + + LQS +DR KLDGLYECILC CCSTSCPSYWWNG++YLGP++L+Q
Sbjct: 140 KPWLQ-SQSPAPSRERLQSPEDRAKLDGLYECILCFCCSTSCPSYWWNGDRYLGPSILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIVDSRDEMTGERLDNLEDPFRLYRCHTIMNCTKACPKGLNPAKAIAEIKKLM 254
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDA+I IKN +D TLTFRRSCREGICGSCAMNI G NTLAC+ I+ KIYPLP
Sbjct: 58 MILDAIIYIKNNIDSTLTFRRSCREGICGSCAMNIDGTNTLACLKAIEEVKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ + YAQ SI+ PW
Sbjct: 118 HMPVVKDLVPDLKHIYAQLASIK-----PW 142
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ KIYPLPHM VVKDLVPD+ + YAQ SI+PWL
Sbjct: 99 ACLKAIEEVKGDVKIYPLPHMPVVKDLVPDLKHIYAQLASIKPWL 143
>gi|88657846|ref|YP_507137.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia chaffeensis
str. Arkansas]
gi|88599303|gb|ABD44772.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Ehrlichia chaffeensis str. Arkansas]
Length = 258
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 151/237 (63%), Gaps = 51/237 (21%)
Query: 116 AEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
A K AK K F IYRW+PD DE P + + +DL+ N++D+ +
Sbjct: 21 ARKGAKNVKCFKIYRWSPDD-DENPRIDTFFIDLDECGQMVLDALIKIKNEVDSTLTFRR 79
Query: 161 ----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYKS 186
IYPLPHM+V+KDLVPD++NFY QY+S
Sbjct: 80 SCREGICGSCAMNIDGTNTLACTKAISDIKSDVNIYPLPHMHVIKDLVPDLSNFYKQYES 139
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
+ PW+Q ++ N N + LQ+++DR KLDG+Y+CILCACCSTSCPSYWWN +KYLGPA L+
Sbjct: 140 VTPWIQAEEPN-HNKERLQTIEDRSKLDGIYDCILCACCSTSCPSYWWNSDKYLGPAALL 198
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRW+IDSRDE + RL+ L D F +YRCHTIMNCT+TCPKGLNP +AIA IK+++
Sbjct: 199 QAYRWLIDSRDEASDSRLDVLDDAFKLYRCHTIMNCTKTCPKGLNPAKAIAHIKQMM 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 100/171 (58%), Gaps = 31/171 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I IYPLP
Sbjct: 59 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVNIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW----------KILGTLTAKN----IRSFQL 106
HM+V+KDLVPD++NFY QY+S+ PW + L T+ ++ I L
Sbjct: 119 HMHVIKDLVPDLSNFYKQYESVT-----PWIQAEEPNHNKERLQTIEDRSKLDGIYDCIL 173
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDAND 156
A S++ P+ Y WN DK +Q Y+ ++++ +A+D
Sbjct: 174 CACCSTSCPS-----------YWWNSDKYLGPAALLQAYRWLIDSRDEASD 213
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K IYPLPHM+V+KDLVPD++NFY QY+S+ PW+
Sbjct: 95 GTNTLACTKAISDIKSDVNIYPLPHMHVIKDLVPDLSNFYKQYESVTPWI 144
>gi|86359475|ref|YP_471367.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli CFN 42]
gi|86283577|gb|ABC92640.1| succinate dehydrogenase subunit B, iron-sulfur protein [Rhizobium
etli CFN 42]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 151/229 (65%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F +YRW+PD + P++ + +D++ NKID
Sbjct: 28 REFRVYRWSPDD-GQNPSIDTFYIDVDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D ++ KIYPLPH+ VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGLDDITGAVKIYPLPHLPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPTPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDITGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDITGAVKIYPLPHLPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|110678936|ref|YP_681943.1| succinate dehydrogenase iron-sulfur subunit [Roseobacter
denitrificans OCh 114]
gi|109455052|gb|ABG31257.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter
denitrificans OCh 114]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F+IYRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGATNLRKFSIYRWNPDD-GQNPRVDTYFVDMDTCGPMILDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V +IYPLPHM VVKDL+PD+ +FYAQ+ S
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEVKGDVRIYPLPHMPVVKDLIPDLTHFYAQHASTM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS+DDRKKLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP AIA IKK++
Sbjct: 200 YRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAEAIANIKKMM 254
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D +IYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ S PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASTM-----PW--LETKTNRPAKEWKQS 157
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D +IYPLPHM VVKDL+PD+ +FYAQ+ S PWL
Sbjct: 94 GINTLACIYGMDEVKGDVRIYPLPHMPVVKDLIPDLTHFYAQHASTMPWL 143
>gi|408376389|ref|ZP_11173994.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
albertimagni AOL15]
gi|407749856|gb|EKF61367.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
albertimagni AOL15]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D + K+YPLPHM VVKDLVPD++NFYAQ++SI+PWLQ ++ QS +DR+
Sbjct: 104 MDEVNGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLQTVSPPPAK-EWKQSHEDRQ 162
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF
Sbjct: 163 KLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPF 222
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 223 RLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D + K+YPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEVNGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D + K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEVNGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|218659068|ref|ZP_03514998.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli IE4771]
Length = 223
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 76 KVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAK-EWKQSHEDRQKLDGLYEC 134
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 135 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDDLEDPFRLYRCHTI 194
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 195 MNCAQTCPKGLNPAKAIAEIKKMM 218
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 22 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLP 81
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 82 HMPVVKDLVPDLSNFYAQHRSIE-----PW 106
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 58 GTNTLACTKGLDDIKGAVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 107
>gi|407798219|ref|ZP_11145127.1| succinate dehydrogenase iron-sulfur subunit [Oceaniovalibus
guishaninsula JLT2003]
gi|407059655|gb|EKE45583.1| succinate dehydrogenase iron-sulfur subunit [Oceaniovalibus
guishaninsula JLT2003]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 146/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + IYRWNPD E P + Y +D++ N+ID
Sbjct: 22 EGATNLRKLDIYRWNPDD-GENPRVDTYFIDMDSCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V +IYPLPHM VVKDL+PD+ +FYAQ+ S+
Sbjct: 81 REGICGSCAMNIDGINTLACIYGLDEVKGDIRIYPLPHMPVVKDLIPDLTHFYAQHASVM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ N ++ QS+DDRKKLDGLYEC++CACCSTSCPSYWWNG+KYLGPA L+ A
Sbjct: 141 PWLET-TTNEPRKEWRQSIDDRKKLDGLYECVMCACCSTSCPSYWWNGDKYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI+DSRDE T +RL+ L+DPF +YRCHTIMNC RTCPKGLNP +AI EIKKL+
Sbjct: 200 YRWIVDSRDEATPERLDDLEDPFKLYRCHTIMNCARTCPKGLNPAKAIMEIKKLM 254
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D +IYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEVKGDIRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ S+ PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASVM-----PW 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P V Y +DS D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGENPRV--DTYFIDMDSCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D +IYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGLDEVKGDIRIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ S+ PWL
Sbjct: 130 THFYAQHASVMPWL 143
>gi|328541808|ref|YP_004301917.1| Succinate dehydrogenase iron-sulfur subunit [Polymorphum gilvum
SL003B-26A1]
gi|326411560|gb|ADZ68623.1| Succinate dehydrogenase iron-sulfur subunit [Polymorphum gilvum
SL003B-26A1]
Length = 260
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 148/239 (61%), Gaps = 54/239 (22%)
Query: 117 EKPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---- 155
+KPA K + IYRWNPD P + Y VD++ NKID
Sbjct: 19 DKPAGAKNLREYRIYRWNPDD-GRNPRVDTYYVDVDDCGPMVLDGLIYIKNKIDPTLTFR 77
Query: 156 -------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQY 184
V KIYPLPHM VVKDLVPD+ FYAQ+
Sbjct: 78 RSCREGICGSCAMNIDGTNTLACTKGMDEVAGAVVKIYPLPHMPVVKDLVPDLTRFYAQH 137
Query: 185 KSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
+SI+PWLQ ++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPA+
Sbjct: 138 RSIEPWLQ-TVSPAPEKEWRQSQEDRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAI 196
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC++ CPKGLNP +AIAEIKK++
Sbjct: 197 LLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCSQACPKGLNPAKAIAEIKKMM 255
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC +D V KIYPL
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVAGAVVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ FYAQ++SI+ PW
Sbjct: 118 PHMPVVKDLVPDLTRFYAQHRSIE-----PW 143
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V KIYPLPHM VVKDLVPD+ FYAQ++SI+PWL
Sbjct: 111 VVKIYPLPHMPVVKDLVPDLTRFYAQHRSIEPWL 144
>gi|398355392|ref|YP_006400856.1| succinate dehydrogenase iron-sulfur subunit SdhB [Sinorhizobium
fredii USDA 257]
gi|390130718|gb|AFL54099.1| succinate dehydrogenase iron-sulfur subunit SdhB [Sinorhizobium
fredii USDA 257]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 149/232 (64%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
K + + +YRWNPD + P + Y +D++ NKID
Sbjct: 25 TKLREYRVYRWNPDD-GKNPRVDTYYIDVDDCGPMVLDGLLYIKNKIDPTLTLRRSCREG 83
Query: 156 ---------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
D+++ KIYPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACTKGMDEINGSVKIYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPTPAK-EWRQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AI EIKK+L
Sbjct: 203 LIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIGEIKKML 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 92/157 (58%), Gaps = 25/157 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D + KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEINGSVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAKNIRSFQ-------------L 106
HM VVKDLVPD+ NFYAQ++SI+ PW K + AK R L
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PWLKTVSPTPAKEWRQSHEDRQKLDGLYECIL 172
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A S++ P+ +Y A+ YRW D DE
Sbjct: 173 CACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDE 209
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D + KIYPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEINGSVKIYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|407787749|ref|ZP_11134888.1| succinate dehydrogenase iron-sulfur subunit [Celeribacter
baekdonensis B30]
gi|407199028|gb|EKE69052.1| succinate dehydrogenase iron-sulfur subunit [Celeribacter
baekdonensis B30]
Length = 259
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 151/236 (63%), Gaps = 52/236 (22%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEK-PTMQEYKVDLN--------------NKIDAN------ 155
E + F IYRWNPD DEK P++ Y +D++ N+ID
Sbjct: 22 EGATNVRKFQIYRWNPD--DEKNPSVDTYFLDMDRCGPMVLDALIKIKNEIDPTLTFRRS 79
Query: 156 -------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D++ +I+PLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 80 CREGICGSCAMNIDGINTLACIYGLDEIKGDVRIFPLPHMSVVKDLIPDLTHFYAQHASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG+KYLGPA L+
Sbjct: 140 MPWLET-KTNRPAKEWRQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDKYLGPAALLH 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIA IKKL+
Sbjct: 199 AYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKKLM 254
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D +I+PLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVRIFPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMSVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWRQS 157
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P+V Y +D D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDEKNPSV--DTYFLDMDRCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D +I+PLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGLDEIKGDVRIFPLPHMSVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|444921149|ref|ZP_21240987.1| Succinate dehydrogenase iron-sulfur subunit [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507885|gb|ELV08059.1| Succinate dehydrogenase iron-sulfur subunit [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 260
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 150/238 (63%), Gaps = 53/238 (22%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID-------- 153
AE + F IYRWNPD E P +Y+V+++ N+ID
Sbjct: 21 AEGATNKRVFKIYRWNPDT-GENPRFDKYEVNMDECGPMVLDALLKIKNEIDPTLTLRRS 79
Query: 154 ----------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
D+V +I PLPHM VVKDLVPD+ +FYAQ+
Sbjct: 80 CREGVCGSCAMNIDGTNTLACTKAIESIGTDEV-RIAPLPHMPVVKDLVPDLTHFYAQHA 138
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SIQPWLQ D N + LQS+++R+KLDG YECILCA CSTSCPSYWWN +KYLGPAVL
Sbjct: 139 SIQPWLQADTPNPPR-ERLQSIEERRKLDGSYECILCASCSTSCPSYWWNSDKYLGPAVL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYR+I+DSRDE +RL +L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 198 LQAYRFIMDSRDEYKGERLAELEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAEIKKLI 255
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 73/92 (79%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
MVLDAL+KIKNE+DPTLT RRSCREG+CGSCAMNI G NTLAC I++ D+V +I P
Sbjct: 58 MVLDALLKIKNEIDPTLTLRRSCREGVCGSCAMNIDGTNTLACTKAIESIGTDEV-RIAP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM VVKDLVPD+ +FYAQ+ SIQ PW
Sbjct: 117 LPHMPVVKDLVPDLTHFYAQHASIQ-----PW 143
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T A+ I D+V +I PLPHM VVKDLVPD+ +FYAQ+ SIQPWL
Sbjct: 101 TKAIESI-GTDEV-RIAPLPHMPVVKDLVPDLTHFYAQHASIQPWL 144
>gi|114764867|ref|ZP_01444049.1| succinate dehydrogenase catalytic subunit [Pelagibaca bermudensis
HTCC2601]
gi|114542753|gb|EAU45776.1| succinate dehydrogenase catalytic subunit [Roseovarius sp.
HTCC2601]
Length = 259
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 149/229 (65%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRW+PD E P + Y +D++ N++D
Sbjct: 28 RAFKIYRWDPDT-GENPRVDTYYLDMDKCGPMVLDALIKIKNEVDPTLTFRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++S K+YPLPHM VVKDL+PD+ +FYAQ+ SI PWL+
Sbjct: 87 SCAMNIDGINTLACIYGLDEISGDVKVYPLPHMPVVKDLIPDLTHFYAQHASIMPWLET- 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWN ++YLGPA L+ AYRWIID
Sbjct: 146 KTNRPEKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNSDRYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+QL+DPF +YRCHTIMNCT+TCPKGLNP ++IAEIKK+L
Sbjct: 206 SRDEATGERLDQLEDPFKLYRCHTIMNCTKTCPKGLNPAKSIAEIKKML 254
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D K+YPLP
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEISGDVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D K+YPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEISGDVKVYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|259415014|ref|ZP_05738936.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter sp.
TrichCH4B]
gi|259348924|gb|EEW60678.1| succinate dehydrogenase iron-sulfur subunit [Silicibacter sp.
TrichCH4B]
Length = 259
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 148/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRWNPD + P + Y +D++ N++D
Sbjct: 22 EGATNVRKFQIYRWNPDD-GKNPQVDTYFLDMDKCGPMVLDALIKIKNEVDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGLDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLE-TKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RLNQL+DPF +YRCHTIMNC +TCPKGLNP +AIA IKK++
Sbjct: 200 YRWIIDSRDEATGERLNQLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKKMM 254
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEVKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|83943854|ref|ZP_00956311.1| succinate dehydrogenase [Sulfitobacter sp. EE-36]
gi|83953495|ref|ZP_00962217.1| succinate dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83842463|gb|EAP81631.1| succinate dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83845101|gb|EAP82981.1| succinate dehydrogenase [Sulfitobacter sp. EE-36]
Length = 259
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 145/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F +YRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGAKNLRQFQVYRWNPDD-GKNPAIDTYFVDMDTCGPMILDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V KIYPLPHM VVKDL+PD+ +FYAQ+ SIQ
Sbjct: 81 REGICGSCAMNIDGINTLACTYGVDEVKGAVKIYPLPHMPVVKDLIPDLTHFYAQHASIQ 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++ QS+DDR KLDGLYECI+CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLETKTAEPAK-EWKQSIDDRAKLDGLYECIMCACCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP AIA IKK++
Sbjct: 200 YRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAAAIANIKKMM 254
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 81/107 (75%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLAC +D KIYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACTYGVDEVKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SIQ PW L T TA+ + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIQ-----PW--LETKTAEPAKEWKQS 157
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + PA+ Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGKNPAI--DTYFVDMDTCGPMILDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A + +D KIYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACTYGVDEVKGAVKIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SIQPWL
Sbjct: 130 THFYAQHASIQPWL 143
>gi|224055647|ref|XP_002298583.1| predicted protein [Populus trichocarpa]
gi|222845841|gb|EEE83388.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 140/234 (59%), Gaps = 50/234 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------------------- 149
+P KTF IYRWNPD P KP +Q Y+VDLN
Sbjct: 50 QPQHLKTFQIYRWNPDNP-TKPELQNYEVDLNKCGPMVLDALIKIKNEIDPTLTFRRSCR 108
Query: 150 --------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
KID + S I PLPHM+V+KDLV DM NFY QYKSI+P
Sbjct: 109 EGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKSIEP 168
Query: 190 WLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
WL+R + + + LQ+ DR KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A
Sbjct: 169 WLKRKNPPPVKGKEILQTKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHA 228
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
RWI+DSRDE T +RL+ + D F +YRCHTI+NC R CPKGLNPG+ I IKKL
Sbjct: 229 NRWIMDSRDEYTKERLDAVNDEFKLYRCHTILNCARACPKGLNPGKQIQNIKKL 282
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMN+ G N LAC++KID + S I PLP
Sbjct: 85 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNMDGCNGLACLTKIDKSGPPSMINPLP 144
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 145 HMFVIKDLVVDMTNFYNQYKSIE-----PW 169
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KID + S I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 126 ACLTKIDKSGPPSMINPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 172
>gi|121996853|ref|YP_001001640.1| succinate dehydrogenase iron-sulfur subunit [Halorhodospira
halophila SL1]
gi|121588258|gb|ABM60838.1| succinate dehydrogenase subunit B [Halorhodospira halophila SL1]
Length = 262
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 100/145 (68%), Positives = 122/145 (84%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+YPLPHM VVKDLVPDMN+FYAQY S++PW++ + + + LQS ++R+ LDGLYEC
Sbjct: 114 KVYPLPHMDVVKDLVPDMNHFYAQYASLEPWIKTETPTPPDKERLQSKEEREALDGLYEC 173
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPA L+QAYRWI DSRDE T RL++L D F +YRCHTI
Sbjct: 174 ILCACCSTSCPSYWWNGDRYLGPAALLQAYRWIADSRDEATGKRLDELDDSFKLYRCHTI 233
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
MNCT TCPKGLNPG+AI IK+L++
Sbjct: 234 MNCTATCPKGLNPGKAIGAIKRLIA 258
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+DPTLTFRRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 60 MVLDALIKIKDEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEIKGDVKVYPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ 105
HM VVKDLVPDMN+FYAQY S++ PW T T + Q
Sbjct: 120 HMDVVKDLVPDMNHFYAQYASLE-----PWIKTETPTPPDKERLQ 159
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 25/125 (20%)
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKD---PFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
G M Y DS D L ++KD P +R R+C +G+
Sbjct: 42 GATPRMDTYEIDADSAGPMVLDALIKIKDEVDPTLTFR--------RSCREGI------- 86
Query: 298 EIKKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 356
G + G +T A K +D K+YPLPHM VVKDLVPDMN+FYAQY S
Sbjct: 87 ------CGSCAMNIDGTNTLACTKGMDEIKGDVKVYPLPHMDVVKDLVPDMNHFYAQYAS 140
Query: 357 IQPWL 361
++PW+
Sbjct: 141 LEPWI 145
>gi|424916469|ref|ZP_18339833.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392852645|gb|EJB05166.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 259
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 153/237 (64%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KPA K F +YRW+PD + P++ + +D++ NKID
Sbjct: 20 KPAGAKNTREFRVYRWSPDD-GQNPSIDTFYIDVDDCGPMVLDGLLYIKNKIDPTLTLRR 78
Query: 156 --------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
D ++ KIYPLPH+ VVKDLVPD+ NFYAQ++S
Sbjct: 79 SCREGICGSCAMNIDGTNTLACTKGLDDITGAVKIYPLPHLPVVKDLVPDLTNFYAQHRS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL+ ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+
Sbjct: 139 IEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 198 QAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDITGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDITGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|399040772|ref|ZP_10736070.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF122]
gi|398061145|gb|EJL52949.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF122]
Length = 259
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 151/237 (63%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KPA K F +YRW+PD + P++ + +D++ NKID
Sbjct: 20 KPAGAKNTREFRVYRWSPDD-GQNPSIDTFYIDVDDCGPMVLDGLLYIKNKIDPTLTLRR 78
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
KIYPLPH+ VVKDLVPD++NFYAQ++S
Sbjct: 79 SCREGICGSCAMNIDGANTLACTKGLDDIKGTVKIYPLPHLPVVKDLVPDLSNFYAQHRS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL+ ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+
Sbjct: 139 IEPWLKTVSPTPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 198 QAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGANTLACTKGLDDIKGTVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GANTLACTKGLDDIKGTVKIYPLPHLPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|254512512|ref|ZP_05124579.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacteraceae
bacterium KLH11]
gi|221536223|gb|EEE39211.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacteraceae
bacterium KLH11]
Length = 259
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGATNVRKFQIYRWNPDD-GQNPRVDTYFVDMDTCGPMVLDGLIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DR+KLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLE-TKTNRPAKEWKQSIEDRRKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDGLIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|395785152|ref|ZP_10464885.1| succinate dehydrogenase iron-sulfur subunit [Bartonella tamiae
Th239]
gi|423717948|ref|ZP_17692138.1| succinate dehydrogenase iron-sulfur subunit [Bartonella tamiae
Th307]
gi|395425339|gb|EJF91508.1| succinate dehydrogenase iron-sulfur subunit [Bartonella tamiae
Th239]
gi|395426381|gb|EJF92508.1| succinate dehydrogenase iron-sulfur subunit [Bartonella tamiae
Th307]
Length = 259
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/232 (53%), Positives = 145/232 (62%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+K F IYRW+PD D+ P + Y VD N N ID
Sbjct: 25 SKLTEFHIYRWSPDD-DQNPRLDTYYVDRNACGPMILDGMLYIKNHIDPTLTFRRSCREG 83
Query: 156 ---------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
D+V KIYPLP M VVKDLVPD+N FYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGSNTLACIKGMDEVKHPIKIYPLPSMPVVKDLVPDLNRFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q ++LQS DDR KLDGLYECILCACC TSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 QTVSPE-PQKEWLQSHDDRLKLDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIA+IKKL+
Sbjct: 203 IADSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIADIKKLM 254
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD ++ IKN +DPTLTFRRSCREGICGSCAMNI G NTLACI +D KIYPLP
Sbjct: 58 MILDGMLYIKNHIDPTLTFRRSCREGICGSCAMNIDGSNTLACIKGMDEVKHPIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+N FYAQ++SI+ PW
Sbjct: 118 SMPVVKDLVPDLNRFYAQHRSIE-----PW 142
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + +D KIYPLP M VVKDLVPD+N FYAQ++SI+PWL
Sbjct: 99 ACIKGMDEVKHPIKIYPLPSMPVVKDLVPDLNRFYAQHRSIEPWL 143
>gi|126725049|ref|ZP_01740892.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacterales
bacterium HTCC2150]
gi|126706213|gb|EBA05303.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacteraceae
bacterium HTCC2150]
Length = 259
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 151/236 (63%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
AE ++ F IYRW ++ + P++ Y VD++ N+ID
Sbjct: 21 AEGATNFRKFQIYRWQ-EEGGKNPSLDTYFVDMDTCGPMVLDALIKIKNEIDPTLSFRRS 79
Query: 156 -------------DKVS---------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D ++ KIYPLPH+ VV+DL+PD+ +FYAQ+ SI
Sbjct: 80 CREGICGSCAMNIDGINTLACIYGMDDIKGDVKIYPLPHLPVVRDLIPDLTHFYAQHASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ K N ++ QS+DDR KLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+
Sbjct: 140 MPWLET-KTNRPAKEWKQSIDDRGKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLH 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 199 AYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTL+FRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLSFRRSCREGICGSCAMNIDGINTLACIYGMDDIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VV+DL+PD+ +FYAQ+ SI PW
Sbjct: 118 HLPVVRDLIPDLTHFYAQHASIM-----PW 142
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPH+ VV+DL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDDIKGDVKIYPLPHLPVVRDLIPDLTHFYAQHASIMPWL 143
>gi|346994757|ref|ZP_08862829.1| succinate dehydrogenase iron-sulfur subunit [Ruegeria sp. TW15]
Length = 259
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 148/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRWNPD + P + Y VD++ N+ID
Sbjct: 28 RKFQIYRWNPDD-GQNPRVDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+
Sbjct: 87 SCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLET- 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ AYRWIID
Sbjct: 146 KTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|217979666|ref|YP_002363813.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylocella silvestris BL2]
gi|217505042|gb|ACK52451.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylocella silvestris BL2]
Length = 259
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 125/152 (82%), Gaps = 1/152 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
ID KIYPLPHM VVKDLVPD+ NFYAQ+ SI+PWLQ K ++ Q+ +DR
Sbjct: 104 IDDIKGAVKIYPLPHMSVVKDLVPDLTNFYAQHASIEPWLQ-TKSPTPEKEWRQAPEDRA 162
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ ++DPF
Sbjct: 163 KLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNVEDPF 222
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC +TCPKGLNP +AIA+IK ++
Sbjct: 223 RLYRCHTIMNCAKTCPKGLNPAKAIAKIKNMM 254
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+I IK+++DPTLTFRRSCREGICGSCAMNI G NTLAC ID KIYPLP
Sbjct: 58 MVLDAIIWIKSKIDPTLTFRRSCREGICGSCAMNIDGANTLACTKAIDDIKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 HMSVVKDLVPDLTNFYAQHASIE-----PW 142
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K ID KIYPLPHM VVKDLVPD+ NFYAQ+ SI+
Sbjct: 81 REGICGSCAMNIDGANTLACTKAIDDIKGAVKIYPLPHMSVVKDLVPDLTNFYAQHASIE 140
Query: 359 PWL 361
PWL
Sbjct: 141 PWL 143
>gi|148908652|gb|ABR17434.1| unknown [Picea sitchensis]
Length = 275
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 140/234 (59%), Gaps = 50/234 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------------------- 149
K +K KTF+IYRWNPD EKP ++ Y ++
Sbjct: 37 KASKPKTFSIYRWNPDH-TEKPRLENYTINTKECGPMVLDALIKIKSETDPSLTFRRSCR 95
Query: 150 --------------------NKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
KI+ A+D + I PLPHM+VVKDLV DM NFY QYKSI+
Sbjct: 96 EGICGSCAMNINGCNGLACLTKIEVASDSATTITPLPHMFVVKDLVVDMTNFYNQYKSIE 155
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+R + LQS DR KLDG+YECILCACCSTSCPSYWWN EKYLGPA L+ A
Sbjct: 156 PWLKRKTPPQDGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPAALLHA 215
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
RWI DSRDE T +RL+ + D F +YRCHTIMNCTR CPKGLNP + IA IKK+
Sbjct: 216 NRWISDSRDEYTEERLDAVTDEFKLYRCHTIMNCTRACPKGLNPAKEIAHIKKI 269
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 74/91 (81%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDALIKIK+E DP+LTFRRSCREGICGSCAMNI G N LAC++KI+ A+D + I PL
Sbjct: 72 MVLDALIKIKSETDPSLTFRRSCREGICGSCAMNINGCNGLACLTKIEVASDSATTITPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLV DM NFY QYKSI+ PW
Sbjct: 132 PHMFVVKDLVVDMTNFYNQYKSIE-----PW 157
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI+ A+D + I PLPHM+VVKDLV DM NFY QYKSI+PWL R
Sbjct: 113 ACLTKIEVASDSATTITPLPHMFVVKDLVVDMTNFYNQYKSIEPWLKR 160
>gi|324526942|gb|ADY48734.1| Succinate dehydrogenase ubiquinone iron-sulfur subunit [Ascaris
suum]
Length = 216
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 128/157 (81%), Gaps = 1/157 (0%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDG 215
K KIYPLPHM+V++DLV DMN FYAQY IQPWLQ+ K ++G Q QS+ +++K+DG
Sbjct: 53 KSVKIYPLPHMFVIRDLVVDMNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDG 112
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRWIIDSRD+ +RL++++D FS ++
Sbjct: 113 LYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFK 172
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKP 312
CHTIMNCT+TCPK LNP +AI EIK LL+ + K P
Sbjct: 173 CHTIMNCTKTCPKHLNPAKAIGEIKMLLTKIRTKPAP 209
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKN++DPTLTFRRSCREGICGSCAMNIGG NTLACI +I+ N K KIYPL
Sbjct: 1 MVLDALIKIKNDIDPTLTFRRSCREGICGSCAMNIGGQNTLACICEIEENKGKSVKIYPL 60
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+V++DLV DMN FYAQY IQ PW
Sbjct: 61 PHMFVIRDLVVDMNLFYAQYAYIQ-----PW 86
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + +I+ N K KIYPLPHM+V++DLV DMN FYAQY IQPWL +
Sbjct: 42 ACICEIEENKGKSVKIYPLPHMFVIRDLVVDMNLFYAQYAYIQPWLQK 89
>gi|209551260|ref|YP_002283177.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209537016|gb|ACI56951.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 259
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDITGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDITGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|254500747|ref|ZP_05112898.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Labrenzia alexandrii DFL-11]
gi|222436818|gb|EEE43497.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Labrenzia alexandrii DFL-11]
Length = 260
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 125/146 (85%), Gaps = 1/146 (0%)
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLY 217
V KIYPLPHM VVKDLVPDM FYAQ++SI+PWL + ++ QS +DR+KLDGLY
Sbjct: 111 VVKIYPLPHMPVVKDLVPDMTRFYAQHRSIEPWL-KTVTPAPEKEWRQSHEDRQKLDGLY 169
Query: 218 ECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCH 277
ECILCACCSTSCPSYWWNG++YLGPA+L+QAYRW+IDSRDE T +RL+ L+DPF +YRCH
Sbjct: 170 ECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDNLEDPFRLYRCH 229
Query: 278 TIMNCTRTCPKGLNPGRAIAEIKKLL 303
TIMNC++ CPKGLNP +AIAEIKK++
Sbjct: 230 TIMNCSQACPKGLNPAKAIAEIKKMM 255
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 76/99 (76%), Gaps = 10/99 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC ++ A D V KIYP
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMEEIAGD-VVKIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
LPHM VVKDLVPDM FYAQ++SI+ PW L T+T
Sbjct: 117 LPHMPVVKDLVPDMTRFYAQHRSIE-----PW--LKTVT 148
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T + +I + V KIYPLPHM VVKDLVPDM FYAQ++SI+PWL
Sbjct: 101 TKGMEEIAGD--VVKIYPLPHMPVVKDLVPDMTRFYAQHRSIEPWL 144
>gi|86138972|ref|ZP_01057543.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp.
MED193]
gi|85824203|gb|EAQ44407.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp.
MED193]
Length = 259
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRWNPD + P + Y +D++ N+ID
Sbjct: 22 EGATNVRKFKIYRWNPDD-GKNPQVDTYFLDMDKCGPMILDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNVDGINTLACIYGLDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG+KYLGPA L+ A
Sbjct: 141 PWLET-KTNAPAKEWRQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDKYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+QL+DPF +YRCHTIMNCT+TCPKGLNP AIA IK ++
Sbjct: 200 YRWIIDSRDEATPERLDQLEDPFKLYRCHTIMNCTKTCPKGLNPAEAIAHIKHMM 254
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMN+ G+NTLACI +D KIYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNVDGINTLACIYGLDEVKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW 142
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEVKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|218675174|ref|ZP_03524843.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli GR56]
Length = 222
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 75 KIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYEC 133
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 134 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 193
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 194 MNCAQTCPKGLNPAKAIAEIKKMM 217
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 21 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLP 80
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 81 HLPVVKDLVPDLTNFYAQHRSIE-----PW 105
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+
Sbjct: 44 REGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIE 103
Query: 359 PWL 361
PWL
Sbjct: 104 PWL 106
>gi|116254175|ref|YP_770013.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|241206661|ref|YP_002977757.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|421589547|ref|ZP_16034676.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium sp. Pop5]
gi|424886714|ref|ZP_18310322.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|424897358|ref|ZP_18320932.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|115258823|emb|CAK09929.1| putative succinate dehydrogenase iron-sulfur protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|240860551|gb|ACS58218.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|393176065|gb|EJC76107.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393181585|gb|EJC81624.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|403705487|gb|EJZ21067.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium sp. Pop5]
Length = 259
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDIKGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|84515888|ref|ZP_01003249.1| succinate dehydrogenase [Loktanella vestfoldensis SKA53]
gi|84510330|gb|EAQ06786.1| succinate dehydrogenase [Loktanella vestfoldensis SKA53]
Length = 259
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 123/144 (85%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM V+KDL+PD+ +FYAQ+ SI PWL+ K N ++ QS+DDRKKLDGLYEC
Sbjct: 112 KIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLET-KSNTPAKEWKQSVDDRKKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CACCSTSCPSYWWNG++YLGPA L+ AYRWI+DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 171 VMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIVDSRDEATGERLDELEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIA IK ++
Sbjct: 231 MNCAKTCPKGLNPAKAIASIKGMM 254
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVIKDLIPDLTHFYAQHASIM-----PW 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN E P + Y +DS D L ++K DP +R R+C +
Sbjct: 33 YRWNPEDGKNPQ--LDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D KIYPLPHM V+KDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGMDEIKGDIKIYPLPHMPVIKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|424872686|ref|ZP_18296348.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393168387|gb|EJC68434.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 259
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDIKGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|402489853|ref|ZP_10836646.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium sp. CCGE
510]
gi|401811192|gb|EJT03561.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium sp. CCGE
510]
Length = 259
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGSVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDIKGSVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|452750686|ref|ZP_21950433.1| Succinate dehydrogenase iron-sulfur protein [alpha proteobacterium
JLT2015]
gi|451961880|gb|EMD84289.1| Succinate dehydrogenase iron-sulfur protein [alpha proteobacterium
JLT2015]
Length = 279
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 145/247 (58%), Gaps = 49/247 (19%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------N 150
++S A S A + KTF IYRW+PD DE P Y +DL N
Sbjct: 29 KISGKARSYPGAGEAKAPKTFKIYRWSPDD-DENPRFDSYILDLEDCGPMVLDALIKIKN 87
Query: 151 KIDAN----------------------------------DKVSKIYPLPHMYVVKDLVPD 176
+ID +I PLPHM VVKDLVPD
Sbjct: 88 EIDPTLTFRRSCREGICGSCSMNINGTNTLACTQPIEDLRGAVQITPLPHMEVVKDLVPD 147
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+FYAQY SI+PWL+ + +QS D R++LDGLYECILCACCST CPSYWWN
Sbjct: 148 FKHFYAQYASIEPWLKTKTPPPAGKERIQSPDQREELDGLYECILCACCSTGCPSYWWNQ 207
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
+K+LGPA+L+QAYRW+ DSRDE T +RL+QL+DPF +YRCHTIMNC CPKGLNP +AI
Sbjct: 208 DKFLGPAILLQAYRWLADSRDEMTGERLDQLEDPFRLYRCHTIMNCANVCPKGLNPAKAI 267
Query: 297 AEIKKLL 303
AEIKKL+
Sbjct: 268 AEIKKLV 274
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNI G NTLAC I+ +I PLP
Sbjct: 77 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNINGTNTLACTQPIEDLRGAVQITPLP 136
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD +FYAQY SI+ PW
Sbjct: 137 HMEVVKDLVPDFKHFYAQYASIE-----PW 161
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM VVKDLVPD +FYAQY SI+PWL
Sbjct: 131 QITPLPHMEVVKDLVPDFKHFYAQYASIEPWL 162
>gi|409400308|ref|ZP_11250418.1| succinate dehydrogenase iron-sulfur subunit [Acidocella sp.
MX-AZ02]
gi|409130693|gb|EKN00440.1| succinate dehydrogenase iron-sulfur subunit [Acidocella sp.
MX-AZ02]
Length = 260
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 149/237 (62%), Gaps = 50/237 (21%)
Query: 116 AEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVS- 159
AE AK K+F +YRWNPD + P M Y+VDL+ N+ID++
Sbjct: 20 AEAGAKRVKSFQVYRWNPDD-GKNPVMDTYEVDLDKCGPMVLDAIIKIKNEIDSSLTFRR 78
Query: 160 ---------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
KI PLPHM VVKDLVPD++ YAQ +S
Sbjct: 79 SCREGICGSCAMNIDGTNTLACLKPIAEVKGDVKITPLPHMPVVKDLVPDLSQPYAQLRS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWLQ D + + LQS ++R +LDGL+ECILC CCSTSCPSYWWNG++YLGPAVL+
Sbjct: 139 IEPWLQSDTPAPPDEERLQSKEERAELDGLWECILCFCCSTSCPSYWWNGDRYLGPAVLL 198
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRWI DSRDE T RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK+L+
Sbjct: 199 QAYRWIADSRDEATGKRLDALEDPFKLYRCHTIMNCTQTCPKGLNPAKAIGKIKQLM 255
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE+D +LTFRRSCREGICGSCAMNI G NTLAC+ I KI PLP
Sbjct: 58 MVLDAIIKIKNEIDSSLTFRRSCREGICGSCAMNIDGTNTLACLKPIAEVKGDVKITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++ YAQ +SI+ PW
Sbjct: 118 HMPVVKDLVPDLSQPYAQLRSIE-----PW 142
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KI PLPHM VVKDLVPD++ YAQ +SI+PWL
Sbjct: 112 KITPLPHMPVVKDLVPDLSQPYAQLRSIEPWL 143
>gi|298293271|ref|YP_003695210.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Starkeya novella DSM 506]
gi|296929782|gb|ADH90591.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Starkeya novella DSM 506]
Length = 260
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/156 (67%), Positives = 124/156 (79%), Gaps = 1/156 (0%)
Query: 148 LNNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSL 207
L + D + KIYPLPHM VVKDLVPDM FYAQ+ SI+PWL + ++ Q+
Sbjct: 101 LKSMDDVDASAVKIYPLPHMPVVKDLVPDMTQFYAQHASIEPWLHTETP-APEKEWRQAR 159
Query: 208 DDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL 267
DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+QAYRW+IDSRDE T DRL+ L
Sbjct: 160 GDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPAALLQAYRWLIDSRDEATGDRLDDL 219
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+DPF +YRCHTIMNC + CPKGLNP +AIAEIKKL+
Sbjct: 220 EDPFRLYRCHTIMNCAKACPKGLNPAKAIAEIKKLM 255
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC+ +D D + KIYPL
Sbjct: 58 MVLDGLIWIKNKVDPTLTFRRSCREGICGSCAMNIDGTNTLACLKSMDDVDASAVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPDM FYAQ+ SI+ PW
Sbjct: 118 PHMPVVKDLVPDMTQFYAQHASIE-----PW 143
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D + KIYPLPHM VVKDLVPDM FYAQ+ SI+PWL
Sbjct: 94 GTNTLACLKSMDDVDASAVKIYPLPHMPVVKDLVPDMTQFYAQHASIEPWL 144
>gi|340378533|ref|XP_003387782.1| PREDICTED: hypothetical protein LOC100632374 [Amphimedon
queenslandica]
Length = 632
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 145/211 (68%), Gaps = 22/211 (10%)
Query: 98 AKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDK 157
A ++ + SAAA + E+P + KTF +YRWNP+ KP MQEYKVDLN
Sbjct: 30 ASKLQIWSSSAAAVATEHKEQP-RLKTFLVYRWNPEVKGSKPKMQEYKVDLN-------- 80
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLY 217
+ P+ V D + + N I P L + + ++LQS++DR KLDGLY
Sbjct: 81 --QCGPM-----VLDALIKIKN------EIDPTLTFRRSCREDYKHLQSMEDRAKLDGLY 127
Query: 218 ECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCH 277
ECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRDE ++RL ++ DPFSV+RCH
Sbjct: 128 ECILCACCSTSCPSYWWNPDKYLGPAVLMQAYRWMIDSRDEYRSERLAKISDPFSVFRCH 187
Query: 278 TIMNCTRTCPKGLNPGRAIAEIKKLLSGLVK 308
TIMNCT+TCPKGLNPGRAIAEIKK+L+ K
Sbjct: 188 TIMNCTKTCPKGLNPGRAIAEIKKMLATATK 218
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCRE 25
MVLDALIKIKNE+DPTLTFRRSCRE
Sbjct: 85 MVLDALIKIKNEIDPTLTFRRSCRE 109
>gi|254486146|ref|ZP_05099351.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp.
GAI101]
gi|214043015|gb|EEB83653.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp.
GAI101]
Length = 248
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 146/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E K F +YRWNPD + P + Y VD++ N+ID
Sbjct: 11 EGAKNLKQFQVYRWNPDD-GKNPAIDTYFVDMDTCGPMILDALIKIKNEIDPTLTFRRSC 69
Query: 156 ------------DKVS---------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D ++ KIYPLPHM VVKDL+PD+ +FYAQ+ SIQ
Sbjct: 70 REGICGSCAMNIDGINTLACTYGVEEVKGAVKIYPLPHMPVVKDLIPDLTHFYAQHASIQ 129
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ + ++ QS+DDR KLDGLYECI+CACCSTSCPSYWWNG++YLGPA L+ A
Sbjct: 130 PWLETETPAPAK-EWKQSIDDRAKLDGLYECIMCACCSTSCPSYWWNGDRYLGPAALLHA 188
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP AIA IKK++
Sbjct: 189 YRWLIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAAAIANIKKMM 243
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLAC ++ KIYPLP
Sbjct: 47 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACTYGVEEVKGAVKIYPLP 106
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SIQ PW
Sbjct: 107 HMPVVKDLIPDLTHFYAQHASIQ-----PW 131
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + PA+ Y +D+ D L ++K DP +R R+C +
Sbjct: 22 YRWNPDDGKNPAI--DTYFVDMDTCGPMILDALIKIKNEIDPTLTFR--------RSCRE 71
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A + ++ KIYPLPHM VVKDL+PD+
Sbjct: 72 GI-------------CGSCAMNIDGINTLACTYGVEEVKGAVKIYPLPHMPVVKDLIPDL 118
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SIQPWL
Sbjct: 119 THFYAQHASIQPWL 132
>gi|149913141|ref|ZP_01901675.1| succinate dehydrogenase catalytic subunit [Roseobacter sp. AzwK-3b]
gi|149813547|gb|EDM73373.1| succinate dehydrogenase catalytic subunit [Roseobacter sp. AzwK-3b]
Length = 249
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 124/144 (86%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+ K N ++ QS++DR+KLDGLYEC
Sbjct: 102 KIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLET-KTNRPAKEWKQSIEDREKLDGLYEC 160
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CA CSTSCPSYWWNG+KYLGPA L+ AYRWIIDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 161 VMCASCSTSCPSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTI 220
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP +AIAEIKK++
Sbjct: 221 MNCTKTCPKGLNPAKAIAEIKKMM 244
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IK ++DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 48 MVLDALIYIKTKIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 107
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 108 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 147
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 84 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 133
>gi|335033562|ref|ZP_08526927.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium sp. ATCC
31749]
gi|333794853|gb|EGL66185.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium sp. ATCC
31749]
Length = 259
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 148/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ + IYRWNPD + P + Y +D+++
Sbjct: 28 REYRIYRWNPDD-GQNPRIDTYYIDVDDCGPMVLDALLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPAPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC ++ K+YPLP
Sbjct: 58 MVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|326513000|dbj|BAK03407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 141/233 (60%), Gaps = 50/233 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF+IYRW+PD P KP +++YKVDL++
Sbjct: 48 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 107
Query: 151 ----KIDANDKV-------------SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
ID ++ + S I PLPHM+VVKDLV DM NFY QYKS++PWL+R
Sbjct: 108 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKR 167
Query: 194 -DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D + G + QS DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI
Sbjct: 168 KDPASAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 227
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRDE T +RL+ + D F +YRCHTI NCT CPKGLNP + I IKKL G
Sbjct: 228 QDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 280
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLDAL+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI + S I PL
Sbjct: 79 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGASTISPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLV DM NFY QYKS++ PW
Sbjct: 139 PHMFVVKDLVVDMTNFYNQYKSVE-----PW 164
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + S I PLPHM+VVKDLV DM NFY QYKS++PWL R
Sbjct: 120 ACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKR 167
>gi|347438523|gb|AEO92017.1| succinate dehydrogenase iron-sulfur protein [Ganoderma lucidum]
Length = 245
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 154/232 (66%), Gaps = 26/232 (11%)
Query: 99 KNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPD-----KPDEKPTMQEYK-------- 145
+ +R F SAA + A P +KP + K F IYRW D K + PT+ +
Sbjct: 14 QTVRGFAASAARAQATPLQKPVRNKEFKIYRWILDALIKIKNEIDPTLTFRRSCREGICG 73
Query: 146 ---VDLNN--------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+++N +ID N K +KIYPLPHMY+VKDLVPD+ FY QYKSI+P+LQ
Sbjct: 74 SCAMNINGQNTLACLCRIDTNASKDTKIYPLPHMYIVKDLVPDLTQFYKQYKSIEPYLQN 133
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D + ++LQS +DRKKLDG+YECILCACCSTSCPSYWWN ++YLGPA LM AYRW+
Sbjct: 134 DNPP-ADREFLQSQEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPATLMAAYRWMA 192
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRD A R+ ++++ S+YRCHTI NC RTCPKGLNP AIA++K L+
Sbjct: 193 DSRDTYKAHRMEKMQNELSLYRCHTIFNCARTCPKGLNPAAAIAKMKLELAA 244
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPLP 60
+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID N K +KIYPLP
Sbjct: 46 ILDALIKIKNEIDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIDTNASKDTKIYPLP 105
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMY+VKDLVPD+ FY QYKSI+ +L
Sbjct: 106 HMYIVKDLVPDLTQFYKQYKSIEPYL 131
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 28/115 (24%)
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVK 308
YRWI+D+ ++ DP +R R+C +G+ G
Sbjct: 43 YRWILDA-----LIKIKNEIDPTLTFR--------RSCREGI-------------CGSCA 76
Query: 309 KDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G +T A L +ID N K +KIYPLPHMY+VKDLVPD+ FY QYKSI+P+L
Sbjct: 77 MNINGQNTLACLCRIDTNASKDTKIYPLPHMYIVKDLVPDLTQFYKQYKSIEPYL 131
>gi|126734844|ref|ZP_01750590.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. CCS2]
gi|126715399|gb|EBA12264.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. CCS2]
Length = 259
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 123/144 (85%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM V+KDL+PD+ +FYAQ+ S+ PWL+ K N ++ QS+DDRKKLDGLYEC
Sbjct: 112 KIYPLPHMPVIKDLIPDLTHFYAQHASVMPWLET-KTNRPAKEWKQSIDDRKKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CACCSTSCPSYWWNG++YLGPA L+ AYRWIIDSRDE T +RL++L+DPF +YRCHTI
Sbjct: 171 VMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIA IK ++
Sbjct: 231 MNCAKTCPKGLNPAKAIAHIKGMM 254
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM V+KDL+PD+ +FYAQ+ S+ PW L T T + + ++ S
Sbjct: 118 HMPVIKDLIPDLTHFYAQHASVM-----PW--LETKTNRPAKEWKQS 157
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM V+KDL+PD+ +FYAQ+ S+ PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVIKDLIPDLTHFYAQHASVMPWL 143
>gi|402820254|ref|ZP_10869821.1| hypothetical protein IMCC14465_10550 [alpha proteobacterium
IMCC14465]
gi|402510997|gb|EJW21259.1| hypothetical protein IMCC14465_10550 [alpha proteobacterium
IMCC14465]
Length = 259
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 147/235 (62%), Gaps = 53/235 (22%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVSK-- 160
EKP +T IYRW+P+ P P M Y++D + N+ID +
Sbjct: 25 EKP---RTLKIYRWDPEDP-ANPRMDTYEIDAADCGPMLLDALIKIKNEIDPTLTFRRSC 80
Query: 161 --------------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ PLPHM V+KDLVPD+ N YAQY+SI+
Sbjct: 81 REGICGSCAMNIDGQNTLACTKGLDETKGKITVRPLPHMPVIKDLVPDLTNLYAQYQSIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D +++ QS +DR+KLDGLYECILCACCSTSCPSYWWN +KYLGPAVL+QA
Sbjct: 141 PWLKTDTPQ-PQSEWKQSREDREKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF VYRCHTIMNC + CPKGL+P +AI+EIKK++
Sbjct: 200 YRWLIDSRDEATGERLDDLEDPFRVYRCHTIMNCAKACPKGLSPAKAISEIKKMM 254
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC +D + PLP
Sbjct: 58 MLLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACTKGLDETKGKITVRPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD+ N YAQY+SI+ PW
Sbjct: 118 HMPVIKDLVPDLTNLYAQYQSIE-----PW 142
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D + PLPHM V+KDLVPD+ N YAQY+SI+PWL
Sbjct: 94 GQNTLACTKGLDETKGKITVRPLPHMPVIKDLVPDLTNLYAQYQSIEPWL 143
>gi|408786335|ref|ZP_11198072.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium lupini
HPC(L)]
gi|424911376|ref|ZP_18334753.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392847407|gb|EJA99929.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|408487707|gb|EKJ96024.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium lupini
HPC(L)]
Length = 259
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 127/152 (83%), Gaps = 1/152 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D + K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+ ++ QS +DR
Sbjct: 104 MDEINGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAK-EWKQSHEDRL 162
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF
Sbjct: 163 KLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPF 222
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 223 RLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D + K+YPLP
Sbjct: 58 MVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEINGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D + K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEINGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|254464819|ref|ZP_05078230.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacterales
bacterium Y4I]
gi|206685727|gb|EDZ46209.1| succinate dehydrogenase, iron-sulfur protein [Rhodobacterales
bacterium Y4I]
Length = 259
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 148/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + F IYRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGASNVRKFKIYRWNPDD-GQNPRVDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ IYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGMDEIKGDVAIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+QL+DPF +YRCHTIMNC +TCPKGLNP +AIA IKK++
Sbjct: 200 YRWIIDSRDEATPERLDQLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKKMM 254
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D IYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVAIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P V Y +DS D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGQNPRV--DTYFVDMDSCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D IYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGMDEIKGDVAIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|304394284|ref|ZP_07376207.1| succinate dehydrogenase iron-sulfur subunit [Ahrensia sp. R2A130]
gi|303293724|gb|EFL88101.1| succinate dehydrogenase iron-sulfur subunit [Ahrensia sp. R2A130]
Length = 261
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 151/240 (62%), Gaps = 50/240 (20%)
Query: 112 SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------- 150
+ + +++ A + F IYRW+PD D P + Y V+ ++
Sbjct: 19 TQIASDQKAPGREFKIYRWSPDD-DRNPRVDTYTVNTDDCGPMVLDALLWIKANVDPTLT 77
Query: 151 ---------------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQ 183
ID + ++ KIYPLPHM VVKDLVPD+ NFYAQ
Sbjct: 78 FRRSCREGICGSCAMNIDGTNTLACTKGMAEVSGAVKIYPLPHMPVVKDLVPDLTNFYAQ 137
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
++SI+P+L+ ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA
Sbjct: 138 HRSIEPYLKTVTPK-PEKEWKQSPEDREKLDGLYECILCACCSTSCPSYWWNGDRYLGPA 196
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRW+IDSRDE T DRL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 197 TLLQAYRWLIDSRDEATGDRLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 256
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 68/86 (79%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IK +DPTLTFRRSCREGICGSCAMNI G NTLAC + KIYPLP
Sbjct: 60 MVLDALLWIKANVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMAEVSGAVKIYPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ NFYAQ++SI+ +L
Sbjct: 120 HMPVVKDLVPDLTNFYAQHRSIEPYL 145
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM VVKDLVPD+ NFYAQ++SI+P+L
Sbjct: 114 KIYPLPHMPVVKDLVPDLTNFYAQHRSIEPYL 145
>gi|325294011|ref|YP_004279875.1| succinate dehydrogenase iron-sulfur protein [Agrobacterium sp.
H13-3]
gi|418409280|ref|ZP_12982593.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
tumefaciens 5A]
gi|325061864|gb|ADY65555.1| succinate dehydrogenase iron-sulfur protein [Agrobacterium sp.
H13-3]
gi|358004597|gb|EHJ96925.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
tumefaciens 5A]
Length = 259
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ + IYRWNPD + P + Y +D+++
Sbjct: 28 REYRIYRWNPDD-GQNPRIDTYYIDIDDCGPMVLDALLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPTPAK-EWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDDLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC ++ K+YPLP
Sbjct: 58 MVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|420240240|ref|ZP_14744486.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF080]
gi|398077190|gb|EJL68199.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF080]
Length = 259
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 149/237 (62%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLNN------------------------ 150
KPA K F IYRWNPD + P + Y +D+++
Sbjct: 20 KPAGAKNVREFRIYRWNPDD-GQNPRIDTYYIDVDDCGPMVLDGLLYIKNNIDPTLTLRR 78
Query: 151 ------------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
ID + ++ K+YPLPHM VVKDLVPD+ NFYAQ++S
Sbjct: 79 SCREGICGSCAMNIDGTNTLACTKGMDDVKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL+ ++ QS +DR+KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+
Sbjct: 139 IEPWLKTVSPPPAK-EWKQSHEDRQKLDGLYECILCACCSTSCPSYWWNGDRYLGPATLL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRW+IDSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 198 QAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDDVKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|99078506|ref|YP_611764.1| succinate dehydrogenase iron-sulfur subunit [Ruegeria sp. TM1040]
gi|99035644|gb|ABF62502.1| succinate dehydrogenase subunit B [Ruegeria sp. TM1040]
Length = 259
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 148/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRWNPD + P++ Y +D++ N+ID
Sbjct: 22 EGATNVRKFQIYRWNPDD-GKNPSVDTYFLDMDKCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIA IKKL+
Sbjct: 200 YRWIIDSRDEATGERLDNLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKKLM 254
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P+V Y +D D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGKNPSV--DTYFLDMDKCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D KIYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|227823649|ref|YP_002827622.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium fredii
NGR234]
gi|378827751|ref|YP_005190483.1| succinate dehydrogenase iron-sulfur protein [Sinorhizobium fredii
HH103]
gi|227342651|gb|ACP26869.1| succinate dehydrogenase iron-sulfur protein [Sinorhizobium fredii
NGR234]
gi|365180803|emb|CCE97658.1| succinate dehydrogenase iron-sulfur protein [Sinorhizobium fredii
HH103]
Length = 259
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 123/144 (85%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAK-EWRQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC + CPKGLNP +AI EIKK+L
Sbjct: 231 MNCAQACPKGLNPAKAIGEIKKML 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 90/157 (57%), Gaps = 25/157 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEIKGSVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAKNIRSFQ-------------L 106
HM VVKDLVPD+ NFYAQ++SI+ PW K + AK R L
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PWLKTVSPTPAKEWRQSHEDRQKLDGLYECIL 172
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A S++ P+ +Y A+ YRW D DE
Sbjct: 173 CACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDE 209
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEIKGSVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|15889898|ref|NP_355579.1| succinate dehydrogenase iron-sulfur [Agrobacterium fabrum str. C58]
gi|15157849|gb|AAK88364.1| succinate dehydrogenase iron-sulfur [Agrobacterium fabrum str. C58]
Length = 259
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ + IYRWNPD + P + Y +D+++
Sbjct: 28 REYRIYRWNPDD-GQNPRIDTYYIDVDDCGPMVLDALLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPTPAK-EWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC ++ K+YPLP
Sbjct: 58 MVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|418297804|ref|ZP_12909644.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355537174|gb|EHH06434.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 259
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ + IYRWNPD + P + Y +D+++
Sbjct: 28 REYRIYRWNPDD-GQNPRIDTYYIDVDDCGPMVLDALLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPTPAK-EWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC ++ K+YPLP
Sbjct: 58 MVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|295687609|ref|YP_003591302.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Caulobacter segnis ATCC 21756]
gi|295429512|gb|ADG08684.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Caulobacter segnis ATCC 21756]
Length = 260
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/147 (70%), Positives = 121/147 (82%), Gaps = 1/147 (0%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K +I PLPHM VVKDL+PD+ FYAQY SI+PWL D A++ QS +DR+KLDGL
Sbjct: 110 KAVQISPLPHMPVVKDLIPDLTLFYAQYASIEPWLHTDTPE-PQAEWRQSPEDREKLDGL 168
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPA L+ AYRW+IDSRDE T DRL+ L+DPF +YRC
Sbjct: 169 YECILCACCSTSCPSYWWNGDKYLGPAALLHAYRWLIDSRDEATGDRLDALEDPFKLYRC 228
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 229 HTIMNCAQVCPKGLNPAKAIAEIKKMM 255
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISK-IDANDKVSKIYPL 59
MVLDAL+ IKN +DPTL FRRSCREG+CGSC+MNIGG NTLAC + K +I PL
Sbjct: 58 MVLDALLYIKNTIDPTLAFRRSCREGVCGSCSMNIGGRNTLACTHGWAEVPGKAVQISPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDL+PD+ FYAQY SI+ PW
Sbjct: 118 PHMPVVKDLIPDLTLFYAQYASIE-----PW 143
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K +I PLPHM VVKDL+PD+ FYAQY SI+PWL
Sbjct: 110 KAVQISPLPHMPVVKDLIPDLTLFYAQYASIEPWL 144
>gi|417858176|ref|ZP_12503233.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
tumefaciens F2]
gi|338824180|gb|EGP58147.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
tumefaciens F2]
Length = 259
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ + IYRWNPD + P + Y +D+++
Sbjct: 28 REYRIYRWNPDD-GQNPRIDTYYIDVDDCGPMVLDALLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPTPAK-EWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEATGERLDDLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC ++ K+YPLP
Sbjct: 58 MVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMEEIKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNFYAQHRSIE-----PW 142
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K+YPLPHM VVKDLVPD++NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMEEIKGTVKVYPLPHMPVVKDLVPDLSNFYAQHRSIEPWL 143
>gi|350539996|ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum
lycopersicum]
gi|270303918|gb|ACZ71182.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum
lycopersicum]
Length = 274
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 150/260 (57%), Gaps = 49/260 (18%)
Query: 91 KILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN- 149
++ + A + + A+ S A E K+F IYRW PD P KP ++EYK+DL
Sbjct: 12 RVQSSAPAARLLVARAHASDSQAQKVESKPNLKSFQIYRWTPDNPG-KPELKEYKIDLKE 70
Query: 150 -------------NKID---------------------------------ANDKVSKIYP 163
N+ID ++D S I P
Sbjct: 71 CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSESTITP 130
Query: 164 LPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYL-QSLDDRKKLDGLYECILC 222
LPHM+V+KDLV DM NFY QYKSI+PWL+R + + QS DR KLDG+YECILC
Sbjct: 131 LPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDRAKLDGMYECILC 190
Query: 223 ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNC 282
ACCSTSCPSYWWN E YLGPA L+ A RWI+DSRDE T +RL+ + D F +YRCHTI+NC
Sbjct: 191 ACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTQERLDAVNDEFKLYRCHTILNC 250
Query: 283 TRTCPKGLNPGRAIAEIKKL 302
+R CPKGLNPG+ I IKKL
Sbjct: 251 SRACPKGLNPGKHIQNIKKL 270
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 74/90 (82%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC++KI ++D S I PLP
Sbjct: 74 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI-SSDSESTITPLP 132
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 133 HMFVIKDLVVDMTNFYNQYKSIE-----PW 157
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI ++D S I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 115 ACLTKI-SSDSESTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 160
>gi|402826712|ref|ZP_10875877.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas sp.
LH128]
gi|402259754|gb|EJU09952.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas sp.
LH128]
Length = 260
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 144/235 (61%), Gaps = 49/235 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID-------- 153
AE K K F +YR++PD E P ++++DL+ N+ID
Sbjct: 21 AEGATKVKKFTVYRYDPDS-GENPRYDQFEIDLDACGPMVLDAIIKIKNEIDPSLTFRRS 79
Query: 154 ------------ANDKVS--------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
N K +I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 80 CREGICGSCAMNMNGKNGLACTTAIEDLKGDIRITPLPHMDVIKDLVPDFTHFYAQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS + R+KLDGLYECILCACCSTSCPSYWWN +K+LGPA+L+Q
Sbjct: 140 RPWLQTVSTTPSGKERLQSPEQREKLDGLYECILCACCSTSCPSYWWNSDKFLGPAILLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AYRW+ DSRDE T +RL++L+DPF +YRCHTIMNC CPKGL+P RAIAEIKK+
Sbjct: 200 AYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPKGLSPARAIAEIKKM 254
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 89/158 (56%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE+DP+LTFRRSCREGICGSCAMN+ G N LAC + I+ +I PLP
Sbjct: 58 MVLDAIIKIKNEIDPSLTFRRSCREGICGSCAMNMNGKNGLACTTAIEDLKGDIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD +FYAQY SI+ PW + T Q
Sbjct: 118 HMDVIKDLVPDFTHFYAQYASIR-----PWLQTVSTTPSGKERLQSPEQREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMDVIKDLVPDFTHFYAQYASIRPWL 143
>gi|15966822|ref|NP_387175.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
1021]
gi|150398153|ref|YP_001328620.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium medicae
WSM419]
gi|334317824|ref|YP_004550443.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium meliloti AK83]
gi|384530948|ref|YP_005715036.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium meliloti BL225C]
gi|384537661|ref|YP_005721746.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
SM11]
gi|407722134|ref|YP_006841796.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
Rm41]
gi|418402322|ref|ZP_12975836.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
CCNWSX0020]
gi|433614896|ref|YP_007191694.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium meliloti GR4]
gi|15076094|emb|CAC47648.1| Probable succinate dehydrogenase iron-sulfur protein [Sinorhizobium
meliloti 1021]
gi|150029668|gb|ABR61785.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium medicae WSM419]
gi|333813124|gb|AEG05793.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium meliloti BL225C]
gi|334096818|gb|AEG54829.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium meliloti AK83]
gi|336034553|gb|AEH80485.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
SM11]
gi|359503663|gb|EHK76211.1| succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
CCNWSX0020]
gi|407320366|emb|CCM68970.1| Succinate dehydrogenase iron-sulfur subunit [Sinorhizobium meliloti
Rm41]
gi|429553086|gb|AGA08095.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sinorhizobium meliloti GR4]
Length = 259
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 146/232 (62%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
A + + +YRWNPD + P + Y +D+++
Sbjct: 25 ANLREYRVYRWNPDD-GKNPRIDTYYIDIDDCGPMVLDGLLYIKNNIDPTLTLRRSCREG 83
Query: 151 -------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
ID + ++ K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACTKGMDEVKGAVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ ++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW
Sbjct: 144 KTVSPTPAK-EWRQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRW 202
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+IDSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP +AI EIKK+L
Sbjct: 203 LIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIGEIKKML 254
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 90/157 (57%), Gaps = 25/157 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEVKGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAKNIRSFQ-------------L 106
HM VVKDLVPD+ NFYAQ++SI+ PW K + AK R L
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PWLKTVSPTPAKEWRQSHEDRLKLDGLYECIL 172
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A S++ P+ +Y A+ YRW D DE
Sbjct: 173 CACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDE 209
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGMDEVKGAVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|89053295|ref|YP_508746.1| succinate dehydrogenase iron-sulfur subunit [Jannaschia sp. CCS1]
gi|88862844|gb|ABD53721.1| succinate dehydrogenase subunit B [Jannaschia sp. CCS1]
Length = 264
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 148/234 (63%), Gaps = 55/234 (23%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRWNPD + P++ Y VD++ N+ID
Sbjct: 28 RKFQIYRWNPDD-GKNPSLDTYWVDMDTCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 156 -----------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
D+V IYPLPHM VVKDL+PD+ +FYAQ+ SI P
Sbjct: 87 SCAMNIGGVKSKGTNTLACIYGMDEVQGDIAIYPLPHMPVVKDLIPDLTHFYAQHASIMP 146
Query: 190 WLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
WL+ K ++ QS++DR+KLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+ AY
Sbjct: 147 WLE-TKTRRPEKEWRQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAY 205
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RWIIDSRDE T +RL++L+DPF +YRCHTIMNCT+TCPKGLNP +AI+ IKK++
Sbjct: 206 RWIIDSRDENTGERLDELEDPFKLYRCHTIMNCTKTCPKGLNPAKAISSIKKMM 259
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 72/95 (75%), Gaps = 10/95 (10%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGV-----NTLACISKIDANDKVSK 55
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGGV NTLACI +D
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIGGVKSKGTNTLACIYGMDEVQGDIA 117
Query: 56 IYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
IYPLPHM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 IYPLPHMPVVKDLIPDLTHFYAQHASIM-----PW 147
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P+ + Y +D+ D L ++K DP +R R+C +
Sbjct: 33 YRWNPDDGKNPS--LDTYWVDMDTCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ A+ + G+ K L A ++ +D IYPLPHM VVKDL+PD+
Sbjct: 83 GICGSCAMN-----IGGVKSKGTNTL--ACIYGMDEVQGDIAIYPLPHMPVVKDLIPDLT 135
Query: 349 NFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 136 HFYAQHASIMPWL 148
>gi|163869245|ref|YP_001610501.1| succinate dehydrogenase iron-sulfur subunit [Bartonella tribocorum
CIP 105476]
gi|32328602|emb|CAD42865.1| putative succinate dehydrogenase iron-sulfur protein subunit B
[Bartonella tribocorum]
gi|161018948|emb|CAK02506.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella
tribocorum CIP 105476]
Length = 259
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E K F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATKLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+N FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLNRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLTFRRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+N FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLNRFYAQHRVIE-----PW 142
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+N FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLNRFYAQHRVIEPWL 143
>gi|332188907|ref|ZP_08390611.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Sphingomonas sp. S17]
gi|332011067|gb|EGI53168.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Sphingomonas sp. S17]
Length = 259
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/143 (70%), Positives = 117/143 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM VVKDLVPD +FYAQY SI+PWLQ + LQS DDR KLDGLYEC
Sbjct: 111 RITPLPHMDVVKDLVPDFTHFYAQYASIKPWLQTVSPAPSGKERLQSPDDRAKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC CPKGLNP +AIAEIKK+
Sbjct: 231 MNCANVCPKGLNPAKAIAEIKKM 253
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K E D +LTFRRSCREGICGSCAMNI G N LAC + I+ +I PLP
Sbjct: 57 MVLDALIKMKAEQDSSLTFRRSCREGICGSCAMNIDGRNGLACTTAIEDVKGEVRITPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD +FYAQY SI+ PW
Sbjct: 117 HMDVVKDLVPDFTHFYAQYASIK-----PW 141
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM VVKDLVPD +FYAQY SI+PWL
Sbjct: 111 RITPLPHMDVVKDLVPDFTHFYAQYASIKPWL 142
>gi|334141650|ref|YP_004534856.1| succinate dehydrogenase iron-sulfur protein [Novosphingobium sp.
PP1Y]
gi|359397478|ref|ZP_09190505.1| succinate dehydrogenase iron-sulfur protein [Novosphingobium
pentaromativorans US6-1]
gi|333939680|emb|CCA93038.1| succinate dehydrogenase iron-sulfur protein [Novosphingobium sp.
PP1Y]
gi|357600987|gb|EHJ62679.1| succinate dehydrogenase iron-sulfur protein [Novosphingobium
pentaromativorans US6-1]
Length = 260
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 143/235 (60%), Gaps = 49/235 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVS------------ 159
AE + K F +YR++PD E P +++DL+N +DA K+
Sbjct: 21 AEGATRVKKFTVYRYDPDS-GENPRYDTFEIDLDNCGPMVLDALIKMKSEQDPSLTFRRS 79
Query: 160 --------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
+I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 80 CREGICGSCAMNMNGSNGLACTTAIEDLKGDIRITPLPHMEVIKDLVPDFTHFYAQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS + R+KLDGLYECILCACCSTSCPSYWWN +K+LGPA+L+Q
Sbjct: 140 RPWLQTVSTTPSGKERLQSPEQREKLDGLYECILCACCSTSCPSYWWNSDKFLGPAILLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AYRW+ DSRDE T +RL++L+DPF +YRCHTIMNC CPKGL+P RAIAEIKK+
Sbjct: 200 AYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPKGLSPARAIAEIKKM 254
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 88/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K+E DP+LTFRRSCREGICGSCAMN+ G N LAC + I+ +I PLP
Sbjct: 58 MVLDALIKMKSEQDPSLTFRRSCREGICGSCAMNMNGSNGLACTTAIEDLKGDIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD +FYAQY SI+ PW + T Q
Sbjct: 118 HMEVIKDLVPDFTHFYAQYASIR-----PWLQTVSTTPSGKERLQSPEQREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMEVIKDLVPDFTHFYAQYASIRPWL 143
>gi|399043417|ref|ZP_10737717.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF122]
gi|398058103|gb|EJL50017.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. CF122]
Length = 260
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 123/144 (85%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KIYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIK ++
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKTMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 5/89 (5%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC+ +D KIYPLPH
Sbjct: 59 VLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACLKGLDDIKGAVKIYPLPH 118
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 119 MPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +D KIYPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 99 ACLKGLDDIKGAVKIYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|338983236|ref|ZP_08632453.1| SdhB [Acidiphilium sp. PM]
gi|338207833|gb|EGO95753.1| SdhB [Acidiphilium sp. PM]
Length = 260
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 144/232 (62%), Gaps = 49/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+ K+F +YRWNPD+ D P Y++DL+ N+ID
Sbjct: 25 TRVKSFKVYRWNPDE-DANPRADTYEIDLDKCGPMVLDALIKIKNEIDPTLTFRRSCREG 83
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ I PLPHM VVKDLVPD+N YAQY+SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLPHMPVVKDLVPDLNQAYAQYRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q + + + QS+++R +LDGL+ECILC CCSTSCPSYWWNG++YLGPAVLM AYRW
Sbjct: 144 QAETPPPPDGERKQSVEERAELDGLWECILCFCCSTSCPSYWWNGDRYLGPAVLMAAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I DSRDE T RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK+++
Sbjct: 204 IADSRDEATGKRLDALEDPFKLYRCHTIMNCTQTCPKGLNPAKAIGKIKQMM 255
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ + I PLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+N YAQY+SI+ PW
Sbjct: 118 HMPVVKDLVPDLNQAYAQYRSIE-----PW 142
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + I PLPHM VVKDLVPD+N YAQY+SI+PWL
Sbjct: 99 ACLKPIEEVKEAVNINPLPHMPVVKDLVPDLNQAYAQYRSIEPWL 143
>gi|254474858|ref|ZP_05088244.1| succinate dehydrogenase, iron-sulfur protein [Ruegeria sp. R11]
gi|214029101|gb|EEB69936.1| succinate dehydrogenase, iron-sulfur protein [Ruegeria sp. R11]
Length = 259
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F+IYRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGATNVRKFSIYRWNPDD-GKNPRVDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AI+ IK+++
Sbjct: 200 YRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAISHIKQMM 254
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|402496745|ref|YP_006556005.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont
of Onchocerca ochengi]
gi|398650018|emb|CCF78188.1| succinate dehydrogenase iron-sulfur subunit [Wolbachia endosymbiont
of Onchocerca ochengi]
Length = 262
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+YPLPHMYV+KDLV D++ FY QYKSI PWLQ DK + N +Y QS +DR+KLDGL +C
Sbjct: 113 KVYPLPHMYVIKDLVSDLSQFYEQYKSINPWLQADKPGLLNKEYSQSPEDRRKLDGLSDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCP+YWWN K+LGPA+L+QAYRWI DSRD K +RL+ L DPF +Y CHTI
Sbjct: 173 ILCACCSTSCPNYWWNSNKFLGPAILLQAYRWIADSRDNKKDERLDALNDPFRLYCCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP RAI E+K+L+
Sbjct: 233 MNCTKTCPKGLNPARAIVEMKQLM 256
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+D TLTFRRSCREGICGSCAMNIGG NTLACI I K+YPLP
Sbjct: 59 MVLDALIKIKDEIDSTLTFRRSCREGICGSCAMNIGGTNTLACIKSIFDIKGDVKVYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HMYV+KDLV D++ FY QYKSI PW
Sbjct: 119 HMYVIKDLVSDLSQFYEQYKSIN-----PW 143
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K+YPLPHMYV+KDLV D++ FY QYKSI PWL
Sbjct: 113 KVYPLPHMYVIKDLVSDLSQFYEQYKSINPWL 144
>gi|339319445|ref|YP_004679140.1| succinate dehydrogenase/fumarate reductase [Candidatus Midichloria
mitochondrii IricVA]
gi|338225570|gb|AEI88454.1| succinate dehydrogenase/fumarate reductase [Candidatus Midichloria
mitochondrii IricVA]
Length = 258
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 142/231 (61%), Gaps = 49/231 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------KIDAN------------- 155
KTF IYR+NPD +E + Y ++ N KID+
Sbjct: 26 KTFNIYRYNPDLKEEGQQIDTYHINTKNCGPMVLDALINIKDKIDSTLTFRRSCREGICG 85
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D+V IYPLPHM VVKDLVPD+ NFY+Q SI+PW+
Sbjct: 86 SCAMNIDGTNTLACIKPIDEVRGDVNIYPLPHMEVVKDLVPDLTNFYSQLASIKPWIHSS 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K G ++ LQS +DRKKLDGLYECILCACCSTSCPSYWWNG+KYLGPA+L+QAYRWIID
Sbjct: 146 KAP-GGSERLQSEEDRKKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIID 204
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
SRDE +RLN L D F +YRCHTIMNC +TCPK LNP AI+ IK+ ++
Sbjct: 205 SRDESKEERLNLLDDNFKLYRCHTIMNCAKTCPKHLNPAEAISAIKREIAA 255
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 96/167 (57%), Gaps = 15/167 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IK+++D TLTFRRSCREGICGSCAMNI G NTLACI ID IYPLP
Sbjct: 57 MVLDALINIKDKIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIDEVRGDVNIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQ------RHLGGPWKILGTLTAKNIRSFQ---LSAAAS 111
HM VVKDLVPD+ NFY+Q SI+ + GG ++ K + L A S
Sbjct: 117 HMEVVKDLVPDLTNFYSQLASIKPWIHSSKAPGGSERLQSEEDRKKLDGLYECILCACCS 176
Query: 112 SAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVDLNNKI 152
++ P+ KY AI YRW D DE + +D N K+
Sbjct: 177 TSCPSYWWNGDKYLGPAILLQAYRWIIDSRDESKEERLNLLDDNFKL 223
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A + ID IYPLPHM VVKDLVPD+ NFY+Q SI+PW+ S
Sbjct: 98 ACIKPIDEVRGDVNIYPLPHMEVVKDLVPDLTNFYSQLASIKPWIHSS 145
>gi|28611029|emb|CAD62367.1| succinate dehydrogenase [Triticum aestivum]
Length = 281
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 140/233 (60%), Gaps = 50/233 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF+IYRW+PD P KP +++YKVDL++
Sbjct: 48 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 107
Query: 151 ----KIDANDKV-------------SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
ID ++ + S I PLPHM+VVKDLV DM NFY QYKS++PWL+R
Sbjct: 108 TCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKR 167
Query: 194 -DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D G + QS DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI
Sbjct: 168 KDPPAAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 227
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRDE T +RL+ + D F +YRCHTI NCT CPKGLNP + I IKKL G
Sbjct: 228 QDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 280
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLDAL+KIKNE DP+LTFRRSCREGICG+CAMNI G N LAC++KI + S I PL
Sbjct: 79 MVLDALLKIKNEQDPSLTFRRSCREGICGTCAMNIDGDNGLACLTKISSEAAGASTISPL 138
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLV DM NFY QYKS++ PW
Sbjct: 139 PHMFVVKDLVVDMTNFYNQYKSVE-----PW 164
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + S I PLPHM+VVKDLV DM NFY QYKS++PWL R
Sbjct: 120 ACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKR 167
>gi|297818328|ref|XP_002877047.1| succinate dehydrogenase 2-1 [Arabidopsis lyrata subsp. lyrata]
gi|297322885|gb|EFH53306.1| succinate dehydrogenase 2-1 [Arabidopsis lyrata subsp. lyrata]
Length = 279
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 153/271 (56%), Gaps = 60/271 (22%)
Query: 91 KILGTLTAKNIRSFQLSAAASSAVPAEKPAK----------YKTFAIYRWNPDKPDEKPT 140
+++GT +K + +L A ++ AE K KTF IYRWNPD P KP
Sbjct: 8 RLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPE 66
Query: 141 MQEYKVDLNN------------------------------------------------KI 152
+++Y+VDL + KI
Sbjct: 67 LKDYQVDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI 126
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRK 211
+ + I PLPHM+V+KDLV DM NFY QYKSI+PWL+R ++ + LQS DR
Sbjct: 127 EDGSSGTTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRA 186
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE T +RL + D F
Sbjct: 187 KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAVDDEF 246
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+YRCHTI+NC R CPKGLNPG+ IA IK+L
Sbjct: 247 KLYRCHTILNCARACPKGLNPGKQIAHIKQL 277
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 91/149 (61%), Gaps = 32/149 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI+ + I PLP
Sbjct: 80 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIEDGSSGTTITPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNIRSFQ------------ 105
HM+V+KDLV DM NFY QYKSI+ PW K ++ AK I +
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSIE-----PWLKRKTPASVPAKEILQSKKDRAKLDGMYEC 194
Query: 106 -LSAAASSAVPAEKPAKYKTFAIYRWNPD 133
L A S++ P+ Y WNP+
Sbjct: 195 ILCACCSTSCPS-----------YWWNPE 212
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI+ + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 121 ACLTKIEDGSSGTTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167
>gi|149184662|ref|ZP_01862980.1| succinate dehydrogenase iron-sulfur subunit [Erythrobacter sp.
SD-21]
gi|148831982|gb|EDL50415.1| succinate dehydrogenase iron-sulfur subunit [Erythrobacter sp.
SD-21]
Length = 260
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 146/237 (61%), Gaps = 49/237 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID-------- 153
AE A+ K F +YR++PD E P +++DL+ N++D
Sbjct: 21 AEGAARVKKFKVYRYDPDT-GENPRYDTFEIDLDECGPMVLDALFKIKNEVDPTLTFRRS 79
Query: 154 -----------------------ANDKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
A D + +I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 80 CREGICGSCSMNMNGKNGLACTTAIDDLKGEIRITPLPHMEVIKDLVPDFTHFYAQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS + R+KLDGLYECILCACCSTSCPSYWWN +K+LGPA+L+Q
Sbjct: 140 RPWLQTVSTTPSGKERLQSPEQREKLDGLYECILCACCSTSCPSYWWNSDKFLGPAILLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
AYRW+ DSRDE T +RL+QL+DPF +YRCHTIMNC CPKGL+P +AIAE KK+++
Sbjct: 200 AYRWLADSRDEMTGERLDQLEDPFRLYRCHTIMNCANVCPKGLSPAKAIAETKKMMA 256
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 88/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE+DPTLTFRRSCREGICGSC+MN+ G N LAC + ID +I PLP
Sbjct: 58 MVLDALFKIKNEVDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIDDLKGEIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD +FYAQY SI+ PW + T Q
Sbjct: 118 HMEVIKDLVPDFTHFYAQYASIR-----PWLQTVSTTPSGKERLQSPEQREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMEVIKDLVPDFTHFYAQYASIRPWL 143
>gi|148260876|ref|YP_001235003.1| succinate dehydrogenase iron-sulfur subunit [Acidiphilium cryptum
JF-5]
gi|146402557|gb|ABQ31084.1| succinate dehydrogenase subunit B [Acidiphilium cryptum JF-5]
Length = 260
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 144/232 (62%), Gaps = 49/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+ K+F +YRWNPD+ D P Y++DL+ N+ID
Sbjct: 25 TRVKSFKVYRWNPDE-DANPRADTYEIDLDKCGPMVLDALIKIKNEIDPTLTFRRSCREG 83
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ I PLPHM VVKDLVPD+N YAQY+SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLPHMPVVKDLVPDLNQAYAQYRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q + + + QS+++R +LDGL+ECILC CC+TSCPSYWWNG++YLGPAVLM AYRW
Sbjct: 144 QAETAPPPDGERKQSVEERAELDGLWECILCFCCTTSCPSYWWNGDRYLGPAVLMAAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I DSRDE T RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK+++
Sbjct: 204 IADSRDEATGKRLDALEDPFKLYRCHTIMNCTQTCPKGLNPAKAIGKIKQMM 255
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ + I PLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+N YAQY+SI+ PW
Sbjct: 118 HMPVVKDLVPDLNQAYAQYRSIE-----PW 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + I PLPHM VVKDLVPD+N YAQY+SI+PWL
Sbjct: 99 ACLKPIEEVKEAVNINPLPHMPVVKDLVPDLNQAYAQYRSIEPWL 143
>gi|440228191|ref|YP_007335282.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium tropici CIAT
899]
gi|440039702|gb|AGB72736.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium tropici CIAT
899]
Length = 259
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ F +YRW+PD + P++ Y +D+++
Sbjct: 28 REFRVYRWSPDD-GQNPSIDTYYIDIDDCGPMVLDGLLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGTNTLACTKGLDEIKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPPPAK-EWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 206 SRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDEIKGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDEIKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|218679778|ref|ZP_03527675.1| succinate dehydrogenase iron-sulfur subunit [Rhizobium etli CIAT
894]
Length = 253
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/143 (71%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR+KLDGLYEC
Sbjct: 112 KIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAK-EWKQSHEDRQKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC +TCPKGLNP +AIAEIK +
Sbjct: 231 MNCAQTCPKGLNPAKAIAEIKNM 253
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDDIKGAVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|430005416|emb|CCF21217.1| succinate dehydrogenase, Fe-S protein [Rhizobium sp.]
Length = 259
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ + IYRWNPD + P + Y VD+++
Sbjct: 28 REYRIYRWNPDD-GQNPRIDTYYVDIDDCGPMVLDGLLYIKNNIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID ++ ++ K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL+
Sbjct: 87 SCAMNIDGSNTLACTKGMDDINGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+ID
Sbjct: 147 SPPPAK-EWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 206 SRDEAKGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D + K+YPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGSNTLACTKGMDDINGTVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HMPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D + K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GSNTLACTKGMDDINGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|384921884|ref|ZP_10021845.1| succinate dehydrogenase iron-sulfur subunit [Citreicella sp. 357]
gi|384464299|gb|EIE48883.1| succinate dehydrogenase iron-sulfur subunit [Citreicella sp. 357]
Length = 259
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRWNP+ E P + Y +D++ N++D
Sbjct: 28 RAFKIYRWNPED-GENPRVDTYHLDMDKCGPMVLDALIKIKNEVDPTLTFRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++ KIYPLPHM VVKDL+PD+N FYAQ+ SI PWL+
Sbjct: 87 SCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDLNLFYAQHASIMPWLE-T 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K N ++ QS++DRKKLDGLYEC++CA CST+CPSYWWN ++YLGPA L+ AYRWIID
Sbjct: 146 KTNRPEKEWKQSIEDRKKLDGLYECVMCASCSTACPSYWWNSDRYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP ++IAEIKK+L
Sbjct: 206 SRDEATPERLDALEDPFKLYRCHTIMNCTKTCPKGLNPAKSIAEIKKML 254
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+N FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLNLFYAQHASIM-----PW 142
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN E P V Y +D D L ++K DP +R R+C +
Sbjct: 33 YRWNPEDGENPRV--DTYHLDMDKCGPMVLDALIKIKNEVDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D KIYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
N FYAQ+ SI PWL
Sbjct: 130 NLFYAQHASIMPWL 143
>gi|83950423|ref|ZP_00959156.1| succinate dehydrogenase [Roseovarius nubinhibens ISM]
gi|83838322|gb|EAP77618.1| succinate dehydrogenase [Roseovarius nubinhibens ISM]
Length = 259
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 123/144 (85%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VV+DL+PD+ +FYAQ+ SI PWL+ K N ++ QS++DR+KLDGLYEC
Sbjct: 112 KIYPLPHMPVVRDLIPDLTHFYAQHASIMPWLET-KTNRPAKEWKQSIEDREKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CA CSTSCPSYWWNG+KYLGPA L+ AYRWIIDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 VMCASCSTSCPSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPKGLNP +AIA IKKL+
Sbjct: 231 MNCTKTCPKGLNPAKAIAHIKKLM 254
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VV+DL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVRDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VV+DL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVRDLIPDLTHFYAQHASIMPWL 143
>gi|356558789|ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
2, mitochondrial-like [Glycine max]
Length = 279
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 146/253 (57%), Gaps = 52/253 (20%)
Query: 101 IRSFQLSAAASSAVP-AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------- 149
+R+ A A P A + KTF IYRWNP+ P KP +++Y+++L
Sbjct: 24 LRAHASEAQAQQVEPKARETPTLKTFQIYRWNPENPS-KPELKDYQINLKECGPMVLDAL 82
Query: 150 ----NKID------------------------------------ANDKVSKIYPLPHMYV 169
N+ID N + I PLPHM+V
Sbjct: 83 IKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEKNSAATTITPLPHMFV 142
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
+KDLV DM NFY QYKSI+PWL+R + + LQS +R+KLDG+YECILCACCSTSC
Sbjct: 143 IKDLVVDMTNFYNQYKSIEPWLKRKNPPVPGKEILQSKKEREKLDGMYECILCACCSTSC 202
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWN E YLGPA L+ A RWI DSRDE T +RL+ + D F +YRCHTI+NC R CPKG
Sbjct: 203 PSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKG 262
Query: 290 LNPGRAIAEIKKL 302
LNPG+ I+ IK L
Sbjct: 263 LNPGKQISHIKSL 275
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 73/92 (79%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI--DANDKVSKIYP 58
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI G N LAC++KI + N + I P
Sbjct: 77 MVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEKNSAATTITP 136
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 137 LPHMFVIKDLVVDMTNFYNQYKSIE-----PW 163
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 317 AALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + N + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 118 ACLTKIPSEKNSAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
>gi|303283560|ref|XP_003061071.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457422|gb|EEH54721.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 295
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/239 (48%), Positives = 146/239 (61%), Gaps = 52/239 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------- 150
KP+ + F IYRW+P+ KP Q YKVD N
Sbjct: 56 KPSNLQEFQIYRWDPETGG-KPRYQTYKVDTNACGPMMLDVLFKIKDEQDNSLSFRRSCR 114
Query: 151 ---------------------KID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K+D ++D KI PLPHM+VV+DLV DM NFYAQYKSI+
Sbjct: 115 EGICGSCAMNIDGVNTLACLCKVDKSSDAPLKIAPLPHMFVVRDLVVDMANFYAQYKSIE 174
Query: 189 PWLQR--DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
P+LQ E + +Y QS +DR KLDGLYECILCACCSTSCPSYWWN ++YLGPAVLM
Sbjct: 175 PYLQTADGSEVLKGTEYHQSKEDRAKLDGLYECILCACCSTSCPSYWWNSDQYLGPAVLM 234
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
QAYRWIIDSRD KT +RL+++ D ++RCHTIMNC++ CPK LNP AIA++K +++
Sbjct: 235 QAYRWIIDSRDGKTEERLDKVNDAMKLFRCHTIMNCSKVCPKSLNPAHAIAKVKAMVTA 293
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LD L KIK+E D +L+FRRSCREGICGSCAMNI GVNTLAC+ K+D ++D KI PL
Sbjct: 91 MMLDVLFKIKDEQDNSLSFRRSCREGICGSCAMNIDGVNTLACLCKVDKSSDAPLKIAPL 150
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLV DM NFYAQYKSI+ +L
Sbjct: 151 PHMFVVRDLVVDMANFYAQYKSIEPYL 177
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L K+D ++D KI PLPHM+VV+DLV DM NFYAQYKSI+P+L
Sbjct: 127 GVNTLACLCKVDKSSDAPLKIAPLPHMFVVRDLVVDMANFYAQYKSIEPYL 177
>gi|393767854|ref|ZP_10356398.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium sp. GXF4]
gi|392726665|gb|EIZ83986.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium sp. GXF4]
Length = 274
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 143/244 (58%), Gaps = 65/244 (26%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------------- 155
+TF IYRWNPD P + Y+VD + NK+D+
Sbjct: 28 QTFKIYRWNPDD-GANPRIDTYQVDRDDCGPMVLDALLWIKNKVDSTLVFRRSCREGICG 86
Query: 156 ------------------------------------DKVSKIYPLPHMYVVKDLVPDMNN 179
D +IYPLPHM V+KDLVPD+ N
Sbjct: 87 SCAMNIEGQNALACTMGIDECKSPDNALPVMTRKDKDGAVRIYPLPHMPVLKDLVPDLTN 146
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FYAQ+ +I+PWLQ + ++ Q+ +DR KLDGLYECILCACCSTSCPSYWWNG+K+
Sbjct: 147 FYAQHAAIEPWLQTETP-APEKEWRQTPEDRSKLDGLYECILCACCSTSCPSYWWNGDKF 205
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPA L+QAYRW+IDSRDE T DRL+ L DPF +YRCHTIMNC TCPK LNP +AIAEI
Sbjct: 206 LGPAALLQAYRWLIDSRDENTGDRLDALHDPFRLYRCHTIMNCANTCPKSLNPAKAIAEI 265
Query: 300 KKLL 303
KK++
Sbjct: 266 KKMM 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 20/105 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----------- 49
MVLDAL+ IKN++D TL FRRSCREGICGSCAMNI G N LAC ID
Sbjct: 58 MVLDALLWIKNKVDSTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKSPDNALPVM 117
Query: 50 ----NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
D +IYPLPHM V+KDLVPD+ NFYAQ+ +I+ PW
Sbjct: 118 TRKDKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHAAIE-----PW 157
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 326 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D +IYPLPHM V+KDLVPD+ NFYAQ+ +I+PWL
Sbjct: 123 DGAVRIYPLPHMPVLKDLVPDLTNFYAQHAAIEPWL 158
>gi|319409390|emb|CBI83034.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella
schoenbuchensis R1]
Length = 259
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 145/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F IYRW+PD D P + Y VD + N ID
Sbjct: 22 EGATQLTEFHIYRWSPDDED-NPRLDTYYVDRSACGPMILDGLLFIKNHIDPTLALRRSC 80
Query: 156 ------------DKVS---------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V+ K+YPLP M VVKDLVPD+ FYAQ+++I+
Sbjct: 81 REGICGSCAMNIDGVNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRAIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE + +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMSGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTL RRSCREGICGSCAMNI GVNTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLALRRSCREGICGSCAMNIDGVNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ+++I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRAIE-----PW 142
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A K +D K+YPLP M VVKDLVPD+ FYAQ+++I+PWL
Sbjct: 94 GVNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRAIEPWL 143
>gi|222474855|ref|YP_002563270.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale
str. Florida]
gi|222418991|gb|ACM49014.1| succinate dehydrogenase iron-sulfur protein (sdhB/frdB) [Anaplasma
marginale str. Florida]
Length = 262
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 146/236 (61%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
AE + F IYRW+PD DE P + + +DL+
Sbjct: 22 AEGAQRVGCFKIYRWSPDD-DEGPRIDTFYIDLDKCGQMVLDALIKIKNEVDSTLTFRRS 80
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID ++ ++ KIYPLPHM V+KDLVPD+++FYAQYKS+
Sbjct: 81 CREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHMNVIKDLVPDLSDFYAQYKSV 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ G ++ LQS++DR KLDG+Y+CILCA CSTSCPSYWWN +KYLGPAVL+Q
Sbjct: 141 SPWLKAQDPVSGTSERLQSVEDRSKLDGIYDCILCASCSTSCPSYWWNSDKYLGPAVLLQ 200
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+ DSRDE T +RL L D F +YRCHTIMNCT+TCPK LNP +AI++IK+L+
Sbjct: 201 VYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCPKDLNPAKAISKIKQLM 256
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 20/155 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM V+KDLVPD+++FYAQYKS+ L + G T++ ++S + L A
Sbjct: 119 HMNVIKDLVPDLSDFYAQYKSVSPWLKAQDPVSG--TSERLQSVEDRSKLDGIYDCILCA 176
Query: 109 AASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
+ S++ P+ KY +YRW D DE
Sbjct: 177 SCSTSCPSYWWNSDKYLGPAVLLQVYRWLADSRDE 211
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM V+KDLVPD+++FYAQYKS+ PWL
Sbjct: 113 KIYPLPHMNVIKDLVPDLSDFYAQYKSVSPWL 144
>gi|406989360|gb|EKE09150.1| hypothetical protein ACD_16C00211G0007 [uncultured bacterium]
Length = 259
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 125/150 (83%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
I+A K+ PLPH+YVVKDLVPD+N Y+QY SI+PWLQ D+ + + LQS+++R+
Sbjct: 104 IEACKSDVKVTPLPHLYVVKDLVPDLNFAYSQYTSIKPWLQSDEAPPPDKERLQSIEERR 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGL+ECILC CCSTSCPSYWWNG+KYLGPA L+QAYRWI+DSRDE T +RL+ L+DPF
Sbjct: 164 KLDGLWECILCFCCSTSCPSYWWNGDKYLGPATLLQAYRWIVDSRDEVTGERLDNLEDPF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
+YRCHTIMNCT TCPK LNPG+AI +IK+
Sbjct: 224 KLYRCHTIMNCTNTCPKDLNPGKAIGKIKE 253
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC I+A K+ PLP
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGTNTLACTKHIEACKSDVKVTPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+YVVKDLVPD+N Y+QY SI+ PW
Sbjct: 118 HLYVVKDLVPDLNFAYSQYTSIK-----PW 142
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K I+A K+ PLPH+YVVKDLVPD+N Y+QY SI+PWL
Sbjct: 94 GTNTLACTKHIEACKSDVKVTPLPHLYVVKDLVPDLNFAYSQYTSIKPWL 143
>gi|326404270|ref|YP_004284352.1| succinate dehydrogenase iron-sulfur subunit [Acidiphilium
multivorum AIU301]
gi|325051132|dbj|BAJ81470.1| succinate dehydrogenase iron-sulfur subunit [Acidiphilium
multivorum AIU301]
Length = 260
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 144/232 (62%), Gaps = 49/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+ K+F +YRWNPD+ D P Y++DL+ N+ID
Sbjct: 25 TRVKSFKVYRWNPDE-DANPRADTYEIDLDKCGPMVLDALIKIKNEIDPTLTFRRSCREG 83
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ I PLPHM VVKDLVPD+N YAQY+SI+PWL
Sbjct: 84 ICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLPHMPVVKDLVPDLNQAYAQYRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q + + + QS+++R +LDGL+ECILC CC+TSCPSYWWNG++YLGPAVLM AYRW
Sbjct: 144 QAETPPPPDGERKQSVEERAELDGLWECILCFCCTTSCPSYWWNGDRYLGPAVLMAAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I DSRDE T RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI +IK+++
Sbjct: 204 IADSRDEATGKRLDALEDPFKLYRCHTIMNCTQTCPKGLNPAKAIGKIKQMM 255
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ + I PLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEEVKEAVNINPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+N YAQY+SI+ PW
Sbjct: 118 HMPVVKDLVPDLNQAYAQYRSIE-----PW 142
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + I PLPHM VVKDLVPD+N YAQY+SI+PWL
Sbjct: 99 ACLKPIEEVKEAVNINPLPHMPVVKDLVPDLNQAYAQYRSIEPWL 143
>gi|56416486|ref|YP_153560.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale
str. St. Maries]
gi|254994710|ref|ZP_05276900.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale
str. Mississippi]
gi|269959101|ref|YP_003328890.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma centrale
str. Israel]
gi|56387718|gb|AAV86305.1| succinate dehydrogenase iron-sulfur protein [Anaplasma marginale
str. St. Maries]
gi|269848932|gb|ACZ49576.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma centrale
str. Israel]
Length = 262
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 146/236 (61%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
AE + F IYRW+PD DE P + + +DL+
Sbjct: 22 AEGAQRVGCFKIYRWSPDD-DEGPRIDTFYIDLDKCGQMVLDALIKIKNEVDSTLTFRRS 80
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID ++ ++ KIYPLPHM V+KDLVPD+++FYAQYKS+
Sbjct: 81 CREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHMNVIKDLVPDLSDFYAQYKSV 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ G ++ LQS++DR KLDG+Y+CILCA CSTSCPSYWWN +KYLGPAVL+Q
Sbjct: 141 SPWLKAKDPVSGTSERLQSVEDRSKLDGIYDCILCASCSTSCPSYWWNSDKYLGPAVLLQ 200
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+ DSRDE T +RL L D F +YRCHTIMNCT+TCPK LNP +AI++IK+L+
Sbjct: 201 VYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCPKDLNPAKAISKIKQLM 256
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 20/155 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM V+KDLVPD+++FYAQYKS+ L + G T++ ++S + L A
Sbjct: 119 HMNVIKDLVPDLSDFYAQYKSVSPWLKAKDPVSG--TSERLQSVEDRSKLDGIYDCILCA 176
Query: 109 AASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
+ S++ P+ KY +YRW D DE
Sbjct: 177 SCSTSCPSYWWNSDKYLGPAVLLQVYRWLADSRDE 211
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM V+KDLVPD+++FYAQYKS+ PWL
Sbjct: 113 KIYPLPHMNVIKDLVPDLSDFYAQYKSVSPWL 144
>gi|255003956|ref|ZP_05278757.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale
str. Virginia]
Length = 242
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 146/236 (61%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
AE + F IYRW+PD DE P + + +DL+
Sbjct: 2 AEGAQRVGCFKIYRWSPDD-DEGPRIDTFYIDLDKCGQMVLDALIKIKNEVDSTLTFRRS 60
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID ++ ++ KIYPLPHM V+KDLVPD+++FYAQYKS+
Sbjct: 61 CREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHMNVIKDLVPDLSDFYAQYKSV 120
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ G ++ LQS++DR KLDG+Y+CILCA CSTSCPSYWWN +KYLGPAVL+Q
Sbjct: 121 SPWLKAKDPVSGTSERLQSVEDRSKLDGIYDCILCASCSTSCPSYWWNSDKYLGPAVLLQ 180
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+ DSRDE T +RL L D F +YRCHTIMNCT+TCPK LNP +AI++IK+L+
Sbjct: 181 VYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCPKDLNPAKAISKIKQLM 236
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 20/155 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 39 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLP 98
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM V+KDLVPD+++FYAQYKS+ L + G T++ ++S + L A
Sbjct: 99 HMNVIKDLVPDLSDFYAQYKSVSPWLKAKDPVSG--TSERLQSVEDRSKLDGIYDCILCA 156
Query: 109 AASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
+ S++ P+ KY +YRW D DE
Sbjct: 157 SCSTSCPSYWWNSDKYLGPAVLLQVYRWLADSRDE 191
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM V+KDLVPD+++FYAQYKS+ PWL
Sbjct: 93 KIYPLPHMNVIKDLVPDLSDFYAQYKSVSPWL 124
>gi|16127756|ref|NP_422320.1| succinate dehydrogenase iron-sulfur subunit [Caulobacter crescentus
CB15]
gi|221236577|ref|YP_002519014.1| succinate dehydrogenase iron-sulfur subunit [Caulobacter crescentus
NA1000]
gi|13425258|gb|AAK25488.1| succinate dehydrogenase, iron-sulfur protein [Caulobacter
crescentus CB15]
gi|220965750|gb|ACL97106.1| succinate dehydrogenase iron-sulfur protein [Caulobacter crescentus
NA1000]
Length = 260
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/147 (69%), Positives = 120/147 (81%), Gaps = 1/147 (0%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K +I PLPHM VVKDL+PD+ FYAQY SI+PWL D ++ QS +DR+KLDGL
Sbjct: 110 KAVQISPLPHMPVVKDLIPDLTLFYAQYASIEPWLHTDTPE-PQTEWKQSPEDREKLDGL 168
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWNG+KYLGPA L+ AYRW+IDSRDE T DRL+ L+DPF +YRC
Sbjct: 169 YECILCACCSTSCPSYWWNGDKYLGPAALLHAYRWLIDSRDEATGDRLDALEDPFKLYRC 228
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 229 HTIMNCAQVCPKGLNPAKAIAEIKKMM 255
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISK-IDANDKVSKIYPL 59
MVLDAL+ IKN +DPTL FRRSCREG+CGSC+MNIGG NTLAC + K +I PL
Sbjct: 58 MVLDALLYIKNTIDPTLAFRRSCREGVCGSCSMNIGGRNTLACTHGWAEVPGKAVQISPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDL+PD+ FYAQY SI+ PW
Sbjct: 118 PHMPVVKDLIPDLTLFYAQYASIE-----PW 143
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K +I PLPHM VVKDL+PD+ FYAQY SI+PWL
Sbjct: 110 KAVQISPLPHMPVVKDLIPDLTLFYAQYASIEPWL 144
>gi|312282975|dbj|BAJ34353.1| unnamed protein product [Thellungiella halophila]
Length = 279
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 148/260 (56%), Gaps = 55/260 (21%)
Query: 97 TAKNIRSFQLSAAASSAVP-----AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN- 150
TA + + +A+ S A P +K KTF IYRWNPD P KP +Q+Y++DL +
Sbjct: 19 TAARLIPARCTASGSEAEPKASSGGGGGSKLKTFQIYRWNPDNPG-KPQLQDYQIDLKDC 77
Query: 151 -----------------------------------------------KIDANDKVSKIYP 163
KI + I P
Sbjct: 78 GPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDGASETTITP 137
Query: 164 LPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILC 222
LPHM+V+KDLV DM NFY QYKSI+PWL+R + + + LQS DR KLDG+YECILC
Sbjct: 138 LPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPSEPGKEILQSKKDRAKLDGMYECILC 197
Query: 223 ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNC 282
ACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC
Sbjct: 198 ACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNC 257
Query: 283 TRTCPKGLNPGRAIAEIKKL 302
R CPKGLNPG+ IA IK+L
Sbjct: 258 ARACPKGLNPGKQIAHIKQL 277
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI + I PLP
Sbjct: 80 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDGASETTITPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSIE-----PW 164
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 121 ACLTKIQDGASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167
>gi|393721023|ref|ZP_10340950.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas
echinoides ATCC 14820]
Length = 261
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 100/143 (69%), Positives = 117/143 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS +DR+KLDGLYEC
Sbjct: 113 RITPLPHMEVIKDLVPDFTHFYAQYSSIKPWLQTVTPPPSGKERLQSPEDREKLDGLYEC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDDLEDPFRLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC CPKGLNP +AIAEIKKL
Sbjct: 233 MNCANVCPKGLNPAKAIAEIKKL 255
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 71/97 (73%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K+E D +LTFRRSCREGICGSCAMNI G NTLAC I+ +I PLP
Sbjct: 59 MVLDALIKMKSEQDSSLTFRRSCREGICGSCAMNIDGTNTLACTKAIEDVKGEVRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM V+KDLVPD +FYAQY SI+ PW L T+T
Sbjct: 119 HMEVIKDLVPDFTHFYAQYSSIK-----PW--LQTVT 148
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 113 RITPLPHMEVIKDLVPDFTHFYAQYSSIKPWL 144
>gi|333983836|ref|YP_004513046.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylomonas methanica MC09]
gi|333807877|gb|AEG00547.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylomonas methanica MC09]
Length = 260
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 143/236 (60%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------ 155
A+ + F +YRW+PD E P + Y++D++ N+ID+
Sbjct: 20 AKGATNIRNFEVYRWDPDS-GENPRIDTYEIDMDHCGPMVLDAILKIKNEIDSGLTFRRS 78
Query: 156 ----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
+ KI+PLPHM V+KDLV DM +F+ QY SI
Sbjct: 79 CREGVCGSCAMNINGKNTLACTKAIADYNGTVKIFPLPHMSVIKDLVADMTHFFDQYTSI 138
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWL D E + + LQS ++R KLDGLYEC+LCACCSTSCPSYWWN +KYLGPA+L+Q
Sbjct: 139 KPWLTNDAEPPADGERLQSREERAKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRW+ DSRD +RL++L + F +YRCHTIMNCT TCPKGLNP +AIAEIKK L
Sbjct: 199 AYRWLADSRDTNDQERLDELNESFKLYRCHTIMNCTDTCPKGLNPAKAIAEIKKQL 254
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA++KIKNE+D LTFRRSCREG+CGSCAMNI G NTLAC I + KI+PLP
Sbjct: 57 MVLDAILKIKNEIDSGLTFRRSCREGVCGSCAMNINGKNTLACTKAIADYNGTVKIFPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLV DM +F+ QY SI+ PW
Sbjct: 117 HMSVIKDLVADMTHFFDQYTSIK-----PW 141
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+ YRW DS + D D I+ GL R+ E + G
Sbjct: 29 FEVYRWDPDSGENPRIDTYEIDMDHCGPMVLDAILKIKNEIDSGLTFRRSCRE---GVCG 85
Query: 306 LVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G +T A K A+ + KI+PLPHM V+KDLV DM +F+ QY SI+PWL
Sbjct: 86 SCAMNINGKNTLACTKAIADYNGTVKIFPLPHMSVIKDLVADMTHFFDQYTSIKPWL 142
>gi|260425826|ref|ZP_05779806.1| succinate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45]
gi|260423766|gb|EEX17016.1| succinate dehydrogenase iron-sulfur subunit [Citreicella sp. SE45]
Length = 259
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 147/229 (64%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRWNP+ E P + Y +D++ N+ID
Sbjct: 28 RAFKIYRWNPED-GENPRVDTYFLDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++ KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+
Sbjct: 87 SCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLE-T 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWN ++YLGPA L+ AYRWIID
Sbjct: 146 KTNRPEKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNSDRYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP ++IAEIK+++
Sbjct: 206 SRDEATGERLDALEDPFKLYRCHTIMNCTKTCPKGLNPAKSIAEIKRMM 254
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ +FYAQ+ SI PW
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN E P V Y +D D L ++K DP +R R+C +
Sbjct: 33 YRWNPEDGENPRV--DTYFLDMDKCGPMVLDALIKIKNEIDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ G + G++T A ++ +D KIYPLPHM VVKDL+PD+
Sbjct: 83 GI-------------CGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVVKDLIPDL 129
Query: 348 NNFYAQYKSIQPWL 361
+FYAQ+ SI PWL
Sbjct: 130 THFYAQHASIMPWL 143
>gi|182679662|ref|YP_001833808.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Beijerinckia indica subsp. indica ATCC 9039]
gi|182635545|gb|ACB96319.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 259
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 122/152 (80%), Gaps = 1/152 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D KIYPLPHM VVKDLVPD+ NFYAQ+ SI+PWL + ++ QS +DR
Sbjct: 104 MDEVKGAVKIYPLPHMMVVKDLVPDLTNFYAQHASIEPWL-KTTTPAPEKEWRQSPEDRS 162
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWNG++YLGPA L+QAYRW+IDSRDE T +RL+ ++DPF
Sbjct: 163 KLDGLYECILCACCSTSCPSYWWNGDRYLGPAALLQAYRWLIDSRDETTGERLDNVEDPF 222
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC + CPKGLNP +AIAEIK ++
Sbjct: 223 RLYRCHTIMNCAKACPKGLNPAKAIAEIKTMM 254
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IK+ +DPTLTFRRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDALIYIKSNIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVKGAVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 HMMVVKDLVPDLTNFYAQHASIE-----PW 142
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K +D KIYPLPHM VVKDLVPD+ NFYAQ+ SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDEVKGAVKIYPLPHMMVVKDLVPDLTNFYAQHASIE 140
Query: 359 PWL 361
PWL
Sbjct: 141 PWL 143
>gi|195131307|ref|XP_002010092.1| GI14882 [Drosophila mojavensis]
gi|193908542|gb|EDW07409.1| GI14882 [Drosophila mojavensis]
Length = 362
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 137/221 (61%), Gaps = 54/221 (24%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ KTF IYRW+P KP Q+Y++DLN N++D
Sbjct: 115 RIKTFEIYRWHPGG---KPKTQKYQIDLNKCGTMVLDALIKVKNEMDGTLTFRRSCREGI 171
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K KIYPLPH+YVV+DLVPD++ FY QY+SI+PWL
Sbjct: 172 CGSCAMNIDGINTLACIQPIDKNLGKPCKIYPLPHLYVVRDLVPDLSRFYEQYRSIEPWL 231
Query: 192 QRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
QR N +G QYLQ+++DR LDGLYECILCACC TSCPSYWWN +KYLGPA+LMQA+
Sbjct: 232 QRKNANREVGKVQYLQAVEDRLLLDGLYECILCACCQTSCPSYWWNSDKYLGPAILMQAF 291
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
RW+IDSRDE T RLN L DP+ +YRCHTI+NCT TCPK L
Sbjct: 292 RWVIDSRDEVTEKRLNMLTDPYKLYRCHTILNCTNTCPKNL 332
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIK+KNEMD TLTFRRSCREGICGSCAMNI G+NTLACI ID N K KIYPL
Sbjct: 145 MVLDALIKVKNEMDGTLTFRRSCREGICGSCAMNIDGINTLACIQPIDKNLGKPCKIYPL 204
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPD++ FY QY+SI+ PW
Sbjct: 205 PHLYVVRDLVPDLSRFYEQYRSIE-----PW 230
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A + ID N K KIYPLPH+YVV+DLVPD++ FY QY+SI+PWL R
Sbjct: 181 GINTLACIQPIDKNLGKPCKIYPLPHLYVVRDLVPDLSRFYEQYRSIEPWLQR 233
>gi|399991591|ref|YP_006571831.1| succinate dehydrogenase iron-sulfur subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400753231|ref|YP_006561599.1| succinate dehydrogenase iron-sulfur subunit [Phaeobacter
gallaeciensis 2.10]
gi|398652384|gb|AFO86354.1| succinate dehydrogenase iron-sulfur subunit [Phaeobacter
gallaeciensis 2.10]
gi|398656146|gb|AFO90112.1| succinate dehydrogenase iron-sulfur subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 259
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 149/235 (63%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F+IYRWNPD + P + Y VD++ N+ID
Sbjct: 22 EGATNVRKFSIYRWNPDD-GKNPQVDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ K+YPLPHM VVKDL+PD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGLDEIKGDVKVYPLPHMPVVKDLIPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PWLET-KTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL++L+DPF +YRCHTIMNC +TCPKGLNP +AI+ IK+++
Sbjct: 200 YRWIIDSRDEATPERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAISHIKQMM 254
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D K+YPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D K+YPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEIKGDVKVYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|255002824|ref|ZP_05277788.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma marginale
str. Puerto Rico]
Length = 245
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 146/236 (61%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
AE + F IYRW+PD DE P + + +DL+
Sbjct: 5 AEGAQRVGCFKIYRWSPDD-DEGPRIDTFYIDLDKCGQMVLDALIKIKNEVDSTLTFRRS 63
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID ++ ++ KIYPLPHM V+KDLVPD+++FYAQYKS+
Sbjct: 64 CREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLPHMNVIKDLVPDLSDFYAQYKSV 123
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ G ++ LQS++DR KLDG+Y+CILCA CSTSCPSYWWN +KYLGPAVL+Q
Sbjct: 124 SPWLKAKDPVSGTSERLQSVEDRSKLDGIYDCILCASCSTSCPSYWWNSDKYLGPAVLLQ 183
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+ DSRDE T +RL L D F +YRCHTIMNCT+TCPK LNP +AI++IK+L+
Sbjct: 184 VYRWLADSRDEATDERLELLDDAFKLYRCHTIMNCTKTCPKDLNPAKAISKIKQLM 239
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 20/155 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 42 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGSNTLACTKYISDIKGDVKIYPLP 101
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM V+KDLVPD+++FYAQYKS+ L + G T++ ++S + L A
Sbjct: 102 HMNVIKDLVPDLSDFYAQYKSVSPWLKAKDPVSG--TSERLQSVEDRSKLDGIYDCILCA 159
Query: 109 AASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
+ S++ P+ KY +YRW D DE
Sbjct: 160 SCSTSCPSYWWNSDKYLGPAVLLQVYRWLADSRDE 194
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KIYPLPHM V+KDLVPD+++FYAQYKS+ PWL
Sbjct: 96 KIYPLPHMNVIKDLVPDLSDFYAQYKSVSPWL 127
>gi|118590537|ref|ZP_01547939.1| succinate dehydrogenase iron-sulfur subunit [Stappia aggregata IAM
12614]
gi|118437000|gb|EAV43639.1| succinate dehydrogenase iron-sulfur subunit [Stappia aggregata IAM
12614]
Length = 260
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 124/146 (84%), Gaps = 1/146 (0%)
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLY 217
V KIYPLPHM VVKDLVPD+ FYAQ++SI+PWL + ++ QS +DR KLDGLY
Sbjct: 111 VVKIYPLPHMPVVKDLVPDLTRFYAQHRSIEPWL-KTVSPPPEKEWRQSHEDRVKLDGLY 169
Query: 218 ECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCH 277
ECILCACCSTSCPSYWWNG++YLGPA+L+QAYRW+IDSRDE T +RL+ L+DPF +YRCH
Sbjct: 170 ECILCACCSTSCPSYWWNGDRYLGPAILLQAYRWLIDSRDEATGERLDDLEDPFRLYRCH 229
Query: 278 TIMNCTRTCPKGLNPGRAIAEIKKLL 303
TIMNC++ CPKGLNP +AIAEIKK++
Sbjct: 230 TIMNCSQACPKGLNPAKAIAEIKKMM 255
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC +D V KIYPL
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVAGDVVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ FYAQ++SI+ PW
Sbjct: 118 PHMPVVKDLVPDLTRFYAQHRSIE-----PW 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V KIYPLPHM VVKDLVPD+ FYAQ++SI+PWL
Sbjct: 111 VVKIYPLPHMPVVKDLVPDLTRFYAQHRSIEPWL 144
>gi|399057276|ref|ZP_10743903.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Novosphingobium sp. AP12]
gi|398042310|gb|EJL35344.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Novosphingobium sp. AP12]
Length = 260
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 142/235 (60%), Gaps = 49/235 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------KIDANDKVS---- 159
AE K K F +YR++PD E P +++DL K +A+ ++
Sbjct: 21 AEGATKVKKFTVYRYDPDS-GENPRYDTFEIDLEKCGPMVLDALIKMKSEADPSLTFRRS 79
Query: 160 --------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
+I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 80 CREGICGSCAMNMNGKNGLACTTAIEDLKGEIRITPLPHMDVIKDLVPDFTHFYAQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS + R+KLDGLYECILCACCSTSCPSYWWN +K+LGPA+L+Q
Sbjct: 140 RPWLQTVSTTPSGKERLQSPEQREKLDGLYECILCACCSTSCPSYWWNSDKFLGPAILLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AYRW+ DSRDE T +RL++L+DPF +YRCHTIMNC CPKGL+P RAIAEIKK+
Sbjct: 200 AYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPKGLSPARAIAEIKKM 254
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K+E DP+LTFRRSCREGICGSCAMN+ G N LAC + I+ +I PLP
Sbjct: 58 MVLDALIKMKSEADPSLTFRRSCREGICGSCAMNMNGKNGLACTTAIEDLKGEIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD +FYAQY SI+ PW
Sbjct: 118 HMDVIKDLVPDFTHFYAQYASIR-----PW 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMDVIKDLVPDFTHFYAQYASIRPWL 143
>gi|226442029|gb|ACO57604.1| succinate dehydrogenase complex subunit B [Gillichthys mirabilis]
Length = 241
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 152/234 (64%), Gaps = 58/234 (24%)
Query: 98 AKNIRSFQLSAA-------ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN- 149
+KN+ +F+ + A ++A PA +P + K F IYRW+PD P +KP MQ Y+++L+
Sbjct: 9 SKNVLAFRNAGAIMLVRYAQTAAAPAPEP-RIKKFQIYRWDPDTPGDKPRMQTYEINLDT 67
Query: 150 -----------------------------------------------NKIDAN-DKVSKI 161
NKID N K +KI
Sbjct: 68 CGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKI 127
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECI 220
YPLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ G QY QS++DR+KLDGLYECI
Sbjct: 128 YPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDESQEGKNQYYQSVEDRQKLDGLYECI 187
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
LCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+Y
Sbjct: 188 LCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLY 241
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 71 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 131 PHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 63/122 (51%), Gaps = 24/122 (19%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y +D+ D L ++K DP +R +C +N G +A
Sbjct: 58 MQTYEINLDTCGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLA----- 112
Query: 303 LSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 113 ---------------CLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Query: 362 PR 363
+
Sbjct: 158 KK 159
>gi|319899433|ref|YP_004159530.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella
clarridgeiae 73]
gi|319403401|emb|CBI76969.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella
clarridgeiae 73]
Length = 259
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 148/243 (60%), Gaps = 51/243 (20%)
Query: 110 ASSAVPAEKPAKYKT-FAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDA 154
A P + A + T F IYRW+PD D P + Y VD + N ID
Sbjct: 14 AGKVWPKPEGATHLTEFHIYRWSPDDED-NPHLDTYYVDRSVCGPMILDGLLFIKNHIDP 72
Query: 155 NDKVS----------------------------------KIYPLPHMYVVKDLVPDMNNF 180
+ K+YPLP M +VKDLVPD+ F
Sbjct: 73 TLTIRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRF 132
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
YAQ+++I+PWL+ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YL
Sbjct: 133 YAQHRAIEPWLKTVSPEPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYL 191
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPAVL+QAYRWIIDSRDE + +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIK
Sbjct: 192 GPAVLLQAYRWIIDSRDEMSGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIK 251
Query: 301 KLL 303
KL+
Sbjct: 252 KLM 254
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTIRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M +VKDLVPD+ FYAQ+++I+ PW
Sbjct: 118 SMPIVKDLVPDLKRFYAQHRAIE-----PW 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M +VKDLVPD+ FYAQ+++I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRAIEPWL 143
>gi|222087466|ref|YP_002546003.1| succinate dehydrogenase iron-sulfur subunit [Agrobacterium
radiobacter K84]
gi|398377062|ref|ZP_10535241.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. AP16]
gi|221724914|gb|ACM28070.1| succinate dehydrogenase subunit B [Agrobacterium radiobacter K84]
gi|397727263|gb|EJK87690.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhizobium sp. AP16]
Length = 259
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 125/152 (82%), Gaps = 1/152 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL+ ++ QS +DR
Sbjct: 104 LDEIKGTVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWLKTVSPPPAK-EWKQSHEDRL 162
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWNG++YLGPAVL+QAYRW+IDSRDE +RL+ L+DPF
Sbjct: 163 KLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEAKGERLDNLEDPF 222
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 223 RLYRCHTIMNCAQTCPKGLNPAKAIAEIKKMM 254
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D KIYPLP
Sbjct: 58 MVLDGLLYIKNNIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDEIKGTVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HLPVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D KIYPLPH+ VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 94 GTNTLACTKGLDEIKGTVKIYPLPHLPVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|383642133|ref|ZP_09954539.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas elodea
ATCC 31461]
Length = 260
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 119/148 (80%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS DR+KLDGLYEC
Sbjct: 112 QITPLPHMDVIKDLVPDFTHFYAQYASIKPWLQTVTTTPSGKERLQSPQDREKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL+QL+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDQLEDPFRLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLSGLV 307
MNC CPKGL+P +AIAE+KKL + V
Sbjct: 232 MNCANACPKGLSPAKAIAEVKKLAAERV 259
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 87/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK E D +LTFRRSCREGICGSC+MNIGG N LAC + I+ +I PLP
Sbjct: 58 MVLDALIKIKGEQDSSLTFRRSCREGICGSCSMNIGGKNGLACTTAIEDIKGEVQITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD +FYAQY SI+ PW T T Q
Sbjct: 118 HMDVIKDLVPDFTHFYAQYASIK-----PWLQTVTTTPSGKERLQSPQDREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 QITPLPHMDVIKDLVPDFTHFYAQYASIKPWL 143
>gi|372278190|ref|ZP_09514226.1| succinate dehydrogenase iron-sulfur subunit [Oceanicola sp. S124]
Length = 259
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 122/143 (85%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+ K N ++ QS++DRKKLDGLYEC+
Sbjct: 113 IYPLPHMPVVKDLIPDLTHFYAQHASIMPWLE-TKTNRPAKEWKQSIEDRKKLDGLYECV 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CA CSTSCPSYWWNG++YLGPA L+ AYRWIIDSRDE T +RL+QL+DPF +YRCHTIM
Sbjct: 172 MCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDQLEDPFKLYRCHTIM 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC +TCPKGLNP +AIA IK+++
Sbjct: 232 NCAKTCPKGLNPAKAIAHIKEMM 254
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI +D IYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGHNTLACIFGLDEVKGDVTIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + +D IYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 99 ACIFGLDEVKGDVTIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|340027726|ref|ZP_08663789.1| succinate dehydrogenase iron-sulfur subunit [Paracoccus sp. TRP]
Length = 259
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 146/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRW+PD E P + Y VDL+ N+ID
Sbjct: 22 EGATNVRRFNIYRWDPDS-GENPRIDTYFVDLDKCGPMILDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+V IYPLPHM VVKDLVPD+ +FYAQ+ S+Q
Sbjct: 81 REGICGSCAMNIDGGNHLACIYGIDEVKGDVNIYPLPHMPVVKDLVPDLTHFYAQHASVQ 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+L + N + ++ QS++DRKKLDGLYECILCA CSTSCPSYWWNG++YLGPA L+ A
Sbjct: 141 PYLITETPN-PDKEWRQSIEDRKKLDGLYECILCASCSTSCPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNCT TCPKGLNP +AIA IK ++
Sbjct: 200 YRWIIDSRDEATGERLDALEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHMM 254
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 70/86 (81%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LACI ID IYPLP
Sbjct: 58 MILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGIDEVKGDVNIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ +FYAQ+ S+Q +L
Sbjct: 118 HMPVVKDLVPDLTHFYAQHASVQPYL 143
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A ++ ID IYPLPHM VVKDLVPD+ +FYAQ+ S+QP+L
Sbjct: 95 GNHLACIYGIDEVKGDVNIYPLPHMPVVKDLVPDLTHFYAQHASVQPYL 143
>gi|163796396|ref|ZP_02190356.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
[alpha proteobacterium BAL199]
gi|159178246|gb|EDP62790.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
[alpha proteobacterium BAL199]
Length = 259
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 143/235 (60%), Gaps = 49/235 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + KTF IYRW+PDK P + Y++D++ N+ID
Sbjct: 22 EGAKRIKTFKIYRWDPDK-GGNPRLDTYEIDMDTCAPMVLDALIKIKNEIDTTLTFRRSC 80
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D IYPLPHM V+KDLVPD++ YAQ S++
Sbjct: 81 REGICGSCSMNIDGTNTLACLKPINEVDGEVHIYPLPHMPVIKDLVPDLSVPYAQLASVE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ + QS D+R KLDGL+EC+LC CC+TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTQTLPSPTEERRQSPDERAKLDGLWECVLCFCCTTSCPSYWWNGDRYLGPAVLLQA 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE T +RL+ L+DPF +YRCHTIMNCT+TCPK LNP +AIAEIKKL+
Sbjct: 201 YRWIADSRDEFTGERLDALEDPFRLYRCHTIMNCTKTCPKSLNPAKAIAEIKKLM 255
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 71/96 (73%), Gaps = 5/96 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSC+MNI G NTLAC+ I+ D IYPLP
Sbjct: 58 MVLDALIKIKNEIDTTLTFRRSCREGICGSCSMNIDGTNTLACLKPINEVDGEVHIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTL 96
HM V+KDLVPD++ YAQ S++ PW TL
Sbjct: 118 HMPVIKDLVPDLSVPYAQLASVE-----PWLQTQTL 148
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ D IYPLPHM V+KDLVPD++ YAQ S++PWL
Sbjct: 99 ACLKPINEVDGEVHIYPLPHMPVIKDLVPDLSVPYAQLASVEPWL 143
>gi|451942649|ref|YP_007463286.1| succinate dehydrogenase iron-sulfur protein [Bartonella vinsonii
subsp. berkhoffii str. Winnie]
gi|451902036|gb|AGF76498.1| succinate dehydrogenase iron-sulfur protein [Bartonella vinsonii
subsp. berkhoffii str. Winnie]
Length = 259
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATRLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMSVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMSVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMSVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|395765499|ref|ZP_10446099.1| succinate dehydrogenase iron-sulfur subunit [Bartonella sp. DB5-6]
gi|395411329|gb|EJF77852.1| succinate dehydrogenase iron-sulfur subunit [Bartonella sp. DB5-6]
Length = 259
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID--------- 153
E K F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATKLTEFHVYRWSPDD-EENPHLDTYYVDRLACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 154 -----------------------ANDKVS--KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVVHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVVHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 112 KVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|381151933|ref|ZP_09863802.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylomicrobium album BG8]
gi|380883905|gb|EIC29782.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylomicrobium album BG8]
Length = 261
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 122/152 (80%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D+ +I+PLPH VVKDLVPD+N+ +AQY SI+PW++ + + LQS DDR
Sbjct: 104 LDSLPDTVRIFPLPHAQVVKDLVPDLNHLFAQYASIKPWIETQTPPPADRERLQSRDDRA 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLY+CILC CCS SCPSYWWN E+YLGPAVL+QAYRW+ DSRDE T +RL++L+DPF
Sbjct: 164 KLDGLYDCILCFCCSASCPSYWWNSERYLGPAVLLQAYRWLNDSRDENTGERLDELEDPF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNCT TCPK LNP +AIAEIKKLL
Sbjct: 224 KLYRCHTIMNCTDTCPKSLNPAKAIAEIKKLL 255
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE+D TLTFRRSCREG+CGSCAMNI G NTLAC +D+ +I+PLP
Sbjct: 58 MVLDAIIKIKNEIDSTLTFRRSCREGVCGSCAMNIDGKNTLACTKSLDSLPDTVRIFPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H VVKDLVPD+N+ +AQY SI+ PW
Sbjct: 118 HAQVVKDLVPDLNHLFAQYASIK-----PW 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D+ +I+PLPH VVKDLVPD+N+ +AQY SI+PW+
Sbjct: 94 GKNTLACTKSLDSLPDTVRIFPLPHAQVVKDLVPDLNHLFAQYASIKPWI 143
>gi|387762365|dbj|BAM15614.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium
gallinaceum]
Length = 313
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 156/249 (62%), Gaps = 51/249 (20%)
Query: 112 SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------KIDAN-- 155
+ + ++ ++ K F+I+R+NP+ +++P MQ ++VD+NN +ID+
Sbjct: 49 NEIKKDEESQLKKFSIFRYNPEN-NKRPKMQTFEVDINNCGPMVLDVLIKIKDEIDSTLS 107
Query: 156 ---------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYA 182
+++++I+PLP++YV+KDLVPD+ NFY
Sbjct: 108 FRRSCREGICGSCAMNIDGKNGLACLTEVNKNKNEITEIHPLPNLYVMKDLVPDLTNFYN 167
Query: 183 QYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLG 241
QYKSI PWL+R K+ G ++ QS++DRKKLDGLYECI+CA CSTSCPSYWWN E YLG
Sbjct: 168 QYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLG 227
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PA LMQAYRWI+DSRDE T +RL + D +YRCH IMNCT CPKGL+P +AI +K+
Sbjct: 228 PATLMQAYRWIVDSRDEYTKERLMDINDTMKLYRCHGIMNCTMCCPKGLDPAKAIKNMKQ 287
Query: 302 LLSGLVKKD 310
L+ KD
Sbjct: 288 LIQENFSKD 296
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 104/175 (59%), Gaps = 30/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ N +++++I+PL
Sbjct: 90 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNIDGKNGLACLTEVNKNKNEITEIHPL 149
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------ 107
P++YV+KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 150 PNLYVMKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYE 204
Query: 108 ----AAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A+ S++ P+ P Y YRW D DE +E +D+N+ +
Sbjct: 205 CIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDSRDE--YTKERLMDINDTM 257
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
MQ + I++ D L ++KD + ++ R+C +G+ A+ + G
Sbjct: 77 MQTFEVDINNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----IDG 126
Query: 306 LVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ N +++++I+PLP++YV+KDLVPD+ NFY QYKSI PWL R
Sbjct: 127 -----KNGL--ACLTEVNKNKNEITEIHPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKR 178
>gi|347526451|ref|YP_004833198.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium sp. SYK-6]
gi|345135132|dbj|BAK64741.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium sp. SYK-6]
Length = 261
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 143/235 (60%), Gaps = 49/235 (20%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------- 150
E A KTF +YR++PD E P +++DL++
Sbjct: 23 EGAANVKTFKVYRYDPDS-GENPRYDRFEIDLDDCGPMVLDALIKMKGEQDSSLTFRRSC 81
Query: 151 ----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
I+ + ++ +I PLPHM V+KDLVPD +FYAQY SIQ
Sbjct: 82 REGICGSCSMNINGRNGLACTTAIEDCKGEVQITPLPHMDVIKDLVPDFTHFYAQYASIQ 141
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ + LQS +DR+KLDGLYECILCACCSTSCPSYWWN +++LGPA+L+QA
Sbjct: 142 PWLKTVTPPPSGKERLQSPEDREKLDGLYECILCACCSTSCPSYWWNSDRFLGPAILLQA 201
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+ DSRDE T +RL+ L+DPF +YRCHTIMNC CPKGLNP RAIAE KK+L
Sbjct: 202 YRWLADSRDEYTGERLDDLEDPFRLYRCHTIMNCANVCPKGLNPARAIAETKKML 256
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K E D +LTFRRSCREGICGSC+MNI G N LAC + I+ +I PLP
Sbjct: 59 MVLDALIKMKGEQDSSLTFRRSCREGICGSCSMNINGRNGLACTTAIEDCKGEVQITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM V+KDLVPD +FYAQY SIQ PW L T+T
Sbjct: 119 HMDVIKDLVPDFTHFYAQYASIQ-----PW--LKTVT 148
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SIQPWL
Sbjct: 113 QITPLPHMDVIKDLVPDFTHFYAQYASIQPWL 144
>gi|312114354|ref|YP_004011950.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311219483|gb|ADP70851.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodomicrobium vannielii ATCC 17100]
Length = 260
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 142/237 (59%), Gaps = 50/237 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P +K F +YRW+P P+M Y V+L N+ID
Sbjct: 21 PGANAKDWKRFEVYRWDPTT-GHNPSMDTYWVNLKECGPMVLDAIIKIKNEIDPTLAFRR 79
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
KIYPLPHM V KDL+PD+++F+AQ++S
Sbjct: 80 SCREGICGSCAMNIDGTNTLACTKPIKEISSTVKIYPLPHMSVSKDLIPDLSHFFAQHRS 139
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWLQ D ++LQS DDR LDGLYECILCACC+TSCPSYWWNG ++LGPA L+
Sbjct: 140 IEPWLQTDSPP-PETEWLQSRDDRAVLDGLYECILCACCTTSCPSYWWNGARFLGPASLL 198
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QA RWI DSRDE+T +RL+ L+DPF +YRCHTI+NC + CPKGLNPG AIAE+KKL+
Sbjct: 199 QARRWIADSRDERTGERLDNLEDPFRLYRCHTILNCAQVCPKGLNPGEAIAELKKLM 255
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I KIYPLP
Sbjct: 59 MVLDAIIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKPIKEISSTVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V KDL+PD+++F+AQ++SI+ PW
Sbjct: 119 HMSVSKDLIPDLSHFFAQHRSIE-----PW 143
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K I KIYPLPHM V KDL+PD+++F+AQ++SI+PWL
Sbjct: 95 GTNTLACTKPIKEISSTVKIYPLPHMSVSKDLIPDLSHFFAQHRSIEPWL 144
>gi|395788952|ref|ZP_10468482.1| succinate dehydrogenase iron-sulfur subunit [Bartonella taylorii
8TBB]
gi|395431086|gb|EJF97113.1| succinate dehydrogenase iron-sulfur subunit [Bartonella taylorii
8TBB]
Length = 259
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATQLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V+ K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVAHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVAHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVAHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|427427343|ref|ZP_18917387.1| Succinate dehydrogenase iron-sulfur protein [Caenispirillum
salinarum AK4]
gi|425883269|gb|EKV31945.1| Succinate dehydrogenase iron-sulfur protein [Caenispirillum
salinarum AK4]
Length = 260
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 124/156 (79%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
ID D +YPLPHM VVKDLVPD+ YAQY+SI+PW++ D N + QS ++R
Sbjct: 104 IDEVDGAVNVYPLPHMPVVKDLVPDLTTVYAQYRSIEPWMKADTAVSANKERPQSPEERA 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+LDGL+ECILC CC+TSCPSYWWNG++YLGPA+L+QA RWI DSRDE T +RL+QL+DPF
Sbjct: 164 ELDGLWECILCFCCTTSCPSYWWNGDRYLGPAILLQAARWINDSRDEATGERLDQLEDPF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLV 307
+YRCHTIMNCT TCPKGLNP +AIA+IK+ L+ V
Sbjct: 224 RLYRCHTIMNCTNTCPKGLNPAKAIADIKQKLAERV 259
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+D TLT RRSCREGICGSC+MNI G NTLAC+ ID D +YPLP
Sbjct: 58 MVLDALLKIKNEVDSTLTLRRSCREGICGSCSMNIDGGNTLACLKPIDEVDGAVNVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN 100
HM VVKDLVPD+ YAQY+SI+ PW T + N
Sbjct: 118 HMPVVKDLVPDLTTVYAQYRSIE-----PWMKADTAVSAN 152
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A L ID D +YPLPHM VVKDLVPD+ YAQY+SI+PW+
Sbjct: 95 GNTLACLKPIDEVDGAVNVYPLPHMPVVKDLVPDLTTVYAQYRSIEPWM 143
>gi|89068118|ref|ZP_01155535.1| succinate dehydrogenase [Oceanicola granulosus HTCC2516]
gi|89046357|gb|EAR52414.1| succinate dehydrogenase [Oceanicola granulosus HTCC2516]
Length = 260
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDL+PD+ +FYAQ+ +I PWL+ K N ++ QS++DRKKLDGLYEC
Sbjct: 113 KIYPLPHMPVVKDLIPDLTHFYAQHAAIMPWLET-KTNRPAKEWKQSIEDRKKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CA CST+CPSYWWNG+K+LGPA L+ AYRWI+DSRDE T +RL+QL+DPF +YRCHTI
Sbjct: 172 VMCASCSTACPSYWWNGDKFLGPAALLNAYRWIVDSRDEATGERLDQLEDPFKLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP RAI IKKL+
Sbjct: 232 MNCAKTCPKGLNPARAIQHIKKLM 255
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 37/152 (24%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
MVLDALIKIK E+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D D++ KIYP
Sbjct: 58 MVLDALIKIKTEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIGGDEI-KIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS----------- 107
LPHM VVKDL+PD+ +FYAQ+ +I PW L T T + + ++ S
Sbjct: 117 LPHMPVVKDLIPDLTHFYAQHAAIM-----PW--LETKTNRPAKEWKQSIEDRKKLDGLY 169
Query: 108 -----AAASSAVPAEKPAKYKTFAIYRWNPDK 134
A+ S+A P+ Y WN DK
Sbjct: 170 ECVMCASCSTACPS-----------YWWNGDK 190
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
Query: 313 GLDT-AALHKID--ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D D++ KIYPLPHM VVKDL+PD+ +FYAQ+ +I PWL
Sbjct: 94 GINTLACIYGMDEIGGDEI-KIYPLPHMPVVKDLIPDLTHFYAQHAAIMPWL 144
>gi|395780586|ref|ZP_10461048.1| succinate dehydrogenase iron-sulfur subunit [Bartonella washoensis
085-0475]
gi|423711816|ref|ZP_17686121.1| succinate dehydrogenase iron-sulfur subunit [Bartonella washoensis
Sb944nv]
gi|395412664|gb|EJF79144.1| succinate dehydrogenase iron-sulfur subunit [Bartonella washoensis
Sb944nv]
gi|395418932|gb|EJF85249.1| succinate dehydrogenase iron-sulfur subunit [Bartonella washoensis
085-0475]
Length = 259
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E K F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATKLAEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGKNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSYTDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGKNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 112 KVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|395783781|ref|ZP_10463630.1| succinate dehydrogenase iron-sulfur subunit [Bartonella melophagi
K-2C]
gi|395425903|gb|EJF92063.1| succinate dehydrogenase iron-sulfur subunit [Bartonella melophagi
K-2C]
Length = 259
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F IYRW+PD D P + Y VD + N ID
Sbjct: 22 EGATQLTEFHIYRWSPDDED-NPRLDTYYVDRSVCGPMILDGLLFIKNHIDPTLALRRSC 80
Query: 156 ------------DKVS---------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V+ K+YPLP M VVKDL+PD+ FYAQ+++I+
Sbjct: 81 REGICGSCAMNIDGVNTLACTKGMDDVKHPIKVYPLPSMPVVKDLIPDLKRFYAQHRAIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMGGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTL RRSCREGICGSCAMNI GVNTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLALRRSCREGICGSCAMNIDGVNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDL+PD+ FYAQ+++I+ PW
Sbjct: 118 SMPVVKDLIPDLKRFYAQHRAIE-----PW 142
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A K +D K+YPLP M VVKDL+PD+ FYAQ+++I+PWL
Sbjct: 94 GVNTLACTKGMDDVKHPIKVYPLPSMPVVKDLIPDLKRFYAQHRAIEPWL 143
>gi|168064341|ref|XP_001784121.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664321|gb|EDQ51045.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 137/228 (60%), Gaps = 50/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
K F+IYRW+PD EKP ++ Y ++ N N+ID +
Sbjct: 3 KKFSIYRWSPDS-SEKPYLKTYSINTNECGPMVLDALIKIKNEIDTGLTFRRSCREGICG 61
Query: 161 ---------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
I PLPHMYV+KDLV DM FY+QYKSI+PWL+
Sbjct: 62 SCAMNIGGSNGLACLTPIEPDPKSETIISPLPHMYVIKDLVVDMTQFYSQYKSIEPWLKT 121
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
K G +YLQ+ DR KLDG+YECILCACC+TSCPSYWWN +KYLGPA L+QA+RWI
Sbjct: 122 KKPAPGGKEYLQTKKDRLKLDGMYECILCACCTTSCPSYWWNPDKYLGPAALLQAHRWIA 181
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
DSRDE T +RL L DPF +YRCHTIMNC + CPKGLNPG IA IKK
Sbjct: 182 DSRDEFTKERLEALDDPFKLYRCHTIMNCAKACPKGLNPGLQIAAIKK 229
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 89/145 (61%), Gaps = 22/145 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY-PL 59
MVLDALIKIKNE+D LTFRRSCREGICGSCAMNIGG N LAC++ I+ + K I PL
Sbjct: 33 MVLDALIKIKNEIDTGLTFRRSCREGICGSCAMNIGGSNGLACLTPIEPDPKSETIISPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLG------GPWKILGT----LTAKNIRSFQLSAA 109
PHMYV+KDLV DM FY+QYKSI+ L G + L T L + L A
Sbjct: 93 PHMYVIKDLVVDMTQFYSQYKSIEPWLKTKKPAPGGKEYLQTKKDRLKLDGMYECILCAC 152
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDK 134
+++ P+ Y WNPDK
Sbjct: 153 CTTSCPS-----------YWWNPDK 166
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 317 AALHKIDANDKVSKIY-PLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + K I PLPHMYV+KDLV DM FY+QYKSI+PWL
Sbjct: 74 ACLTPIEPDPKSETIISPLPHMYVIKDLVVDMTQFYSQYKSIEPWL 119
>gi|294676293|ref|YP_003576908.1| succinate dehydrogenase, iron-sulfur subunit [Rhodobacter
capsulatus SB 1003]
gi|294475113|gb|ADE84501.1| succinate dehydrogenase, iron-sulfur subunit [Rhodobacter
capsulatus SB 1003]
Length = 259
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRW+PD E P + Y +D++ N+ID
Sbjct: 22 EGAKNTRKFKIYRWDPDT-GENPRVDTYFLDMDRCGPMVLDALLKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ +IYPLPHM VVKDLVPD+ FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGINTLACIYGLDEIKGDVRIYPLPHMPVVKDLVPDLTLFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+LQ N ++LQS++DRKKLDGLYEC++CA CSTSCPSYWWN ++YLGPA L+ A
Sbjct: 141 PFLQ-TTTNKPEKEWLQSIEDRKKLDGLYECVMCASCSTSCPSYWWNSDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE TA+RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIK+L+
Sbjct: 200 YRWIIDSRDEATAERLDALEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKRLM 254
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 70/86 (81%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D +IYPLP
Sbjct: 58 MVLDALLKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ FYAQ+ SI L
Sbjct: 118 HMPVVKDLVPDLTLFYAQHASIMPFL 143
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D +IYPLPHM VVKDLVPD+ FYAQ+ SI P+L
Sbjct: 94 GINTLACIYGLDEIKGDVRIYPLPHMPVVKDLVPDLTLFYAQHASIMPFL 143
>gi|426401218|ref|YP_007020190.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Candidatus Endolissoclinum patella L2]
gi|425857886|gb|AFX98922.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Candidatus Endolissoclinum patella L2]
Length = 259
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 144/232 (62%), Gaps = 49/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
++ K F +YR++PDK P + Y++DL+N
Sbjct: 25 SRIKNFKVYRYDPDKA-SNPKLDTYEIDLDNCQPMVLDALIKIKNEIDTTLTFRRSCREG 83
Query: 151 -------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
ID + ++ IYPLPHM V++DLVPD++ YAQ SI+PWL
Sbjct: 84 ICGSCSMNIDGTNTLACLKSISDIKGDVYIYPLPHMPVIRDLVPDLSLSYAQLTSIKPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q D + + + QS +R+KLDGL+EC+LC CCST CPSYWWN E YLGPAVL+QAYRW
Sbjct: 144 QADTPHSIDKEREQSPQERRKLDGLWECVLCFCCSTGCPSYWWNSESYLGPAVLLQAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I+DSRD++T DRLN L DPF +YRCHTIMNCT TCPKGLNP +AIAE+KKLL
Sbjct: 204 IVDSRDKQTEDRLNMLDDPFRLYRCHTIMNCTNTCPKGLNPAKAIAEVKKLL 255
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSC+MNI G NTLAC+ I IYPLP
Sbjct: 58 MVLDALIKIKNEIDTTLTFRRSCREGICGSCSMNIDGTNTLACLKSISDIKGDVYIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V++DLVPD++ YAQ SI+ PW
Sbjct: 118 HMPVIRDLVPDLSLSYAQLTSIK-----PW 142
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V++DLVPD++ YAQ SI+PWL
Sbjct: 113 IYPLPHMPVIRDLVPDLSLSYAQLTSIKPWL 143
>gi|15232149|ref|NP_189374.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
[Arabidopsis thaliana]
gi|186510498|ref|NP_001118718.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
[Arabidopsis thaliana]
gi|110808204|sp|Q8LBZ7.2|DHSB1_ARATH RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit 1, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|7939510|dbj|BAA95713.1| succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana]
gi|14334680|gb|AAK59518.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis
thaliana]
gi|17104677|gb|AAL34227.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis
thaliana]
gi|60547777|gb|AAX23852.1| hypothetical protein At3g27370 [Arabidopsis thaliana]
gi|332643788|gb|AEE77309.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
[Arabidopsis thaliana]
gi|332643789|gb|AEE77310.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
[Arabidopsis thaliana]
Length = 279
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 150/271 (55%), Gaps = 60/271 (22%)
Query: 91 KILGTLTAKNIRSFQLSAAASSAVPAEKPAK----------YKTFAIYRWNPDKPDEKPT 140
+++GT +K + +L A ++ AE K KTF IYRWNPD P KP
Sbjct: 8 RLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPE 66
Query: 141 MQEYKVDLNN------------------------------------------------KI 152
+Q Y++DL + KI
Sbjct: 67 LQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI 126
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRK 211
+ I PLPHM+V+KDLV DM NFY QYKSI+PWL+R ++ + LQS DR
Sbjct: 127 QDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRA 186
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE T +RL + D F
Sbjct: 187 KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEF 246
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+YRCHTI+NC R CPKGLNPG+ I IK+L
Sbjct: 247 KLYRCHTILNCARACPKGLNPGKQITHIKQL 277
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 90/149 (60%), Gaps = 32/149 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI + I PLP
Sbjct: 80 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNIRSFQ------------ 105
HM+V+KDLV DM NFY QYKSI+ PW K ++ AK I +
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSIE-----PWLKRKTPASVPAKEILQSKKDRAKLDGMYEC 194
Query: 106 -LSAAASSAVPAEKPAKYKTFAIYRWNPD 133
L A S++ P+ Y WNP+
Sbjct: 195 ILCACCSTSCPS-----------YWWNPE 212
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167
>gi|255089759|ref|XP_002506801.1| succinate dehydrogenase [Micromonas sp. RCC299]
gi|226522074|gb|ACO68059.1| succinate dehydrogenase [Micromonas sp. RCC299]
Length = 289
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 148/238 (62%), Gaps = 51/238 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------------------- 149
A+ PA + F IYRW+P+ KP Q YKVD N
Sbjct: 52 AKPPANVQEFQIYRWDPESGG-KPRYQTYKVDTNACGPMMLDVLFKIKDEQDNSLAFRRS 110
Query: 150 ----------------------NKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
+K+D A KI PLPHM+VV+DLV DM NFYAQYKS
Sbjct: 111 CREGICGSCAMNINGTNTLACLSKVDKATSGAQKIAPLPHMFVVRDLVVDMANFYAQYKS 170
Query: 187 IQPWLQRDKENIGNA-QYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
++P+L+ ++ +++Q+ ++R KLDGLYECILCACCSTSCPSYWWN ++YLGPAVL
Sbjct: 171 VEPYLKIKSGDLKKGVEHIQTKEERAKLDGLYECILCACCSTSCPSYWWNQDQYLGPAVL 230
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
MQAYRWIIDSRDE T +RL+++ D ++RCHTIMNC++ CPKGLNP +AIA++K ++
Sbjct: 231 MQAYRWIIDSRDEYTEERLDKVNDAMKLFRCHTIMNCSKVCPKGLNPAKAIAKVKTMV 288
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LD L KIK+E D +L FRRSCREGICGSCAMNI G NTLAC+SK+D A KI PL
Sbjct: 89 MMLDVLFKIKDEQDNSLAFRRSCREGICGSCAMNINGTNTLACLSKVDKATSGAQKIAPL 148
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLV DM NFYAQYKS++ +L
Sbjct: 149 PHMFVVRDLVVDMANFYAQYKSVEPYL 175
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 317 AALHKID-ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L K+D A KI PLPHM+VV+DLV DM NFYAQYKS++P+L
Sbjct: 130 ACLSKVDKATSGAQKIAPLPHMFVVRDLVVDMANFYAQYKSVEPYL 175
>gi|407783537|ref|ZP_11130736.1| succinate dehydrogenase iron-sulfur subunit [Oceanibaculum indicum
P24]
gi|407201543|gb|EKE71542.1| succinate dehydrogenase iron-sulfur subunit [Oceanibaculum indicum
P24]
Length = 259
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM V+KDLVPD++ YAQ SI+PWLQ + + + QS ++R+KLDGL+EC
Sbjct: 112 KIYPLPHMPVIKDLVPDLSTPYAQLASIEPWLQTESAPPPDTERRQSPEEREKLDGLWEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
+LC CCSTSCPSYWWNG++YLGPAVL+QAYRWI DSRDEKT +RL+ L+DPF +YRCHTI
Sbjct: 172 VLCFCCSTSCPSYWWNGDRYLGPAVLLQAYRWIADSRDEKTGERLDALEDPFRLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT+TCPK LNP +AIAEIKK++
Sbjct: 232 MNCTKTCPKHLNPAKAIAEIKKMM 255
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSC+MNI G NTLAC+ I+ + KIYPLP
Sbjct: 58 MVLDALIKIKNEVDTTLTFRRSCREGICGSCSMNIDGTNTLACLKPIEDVEGEVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD++ YAQ SI+ PW
Sbjct: 118 HMPVIKDLVPDLSTPYAQLASIE-----PW 142
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + KIYPLPHM V+KDLVPD++ YAQ SI+PWL
Sbjct: 99 ACLKPIEDVEGEVKIYPLPHMPVIKDLVPDLSTPYAQLASIEPWL 143
>gi|289669024|ref|ZP_06490099.1| succinate dehydrogenase iron-sulfur subunit, partial [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 243
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/226 (50%), Positives = 138/226 (61%), Gaps = 50/226 (22%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK 160
PA+ +TF +YRW+PD D P Y++DL+ N+ID +
Sbjct: 19 PAQGAKNTRTFKVYRWDPDV-DANPRTDSYEIDLDKCGPMVLDALIKIKNEIDPTLAFRR 77
Query: 161 -----------------------------------IYPLPHMYVVKDLVPDMNNFYAQYK 185
IYPLPHM V+KDLVPD+ +FYAQY
Sbjct: 78 SCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYA 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ + + LQS +DR+KLDGLYECILCACCSTSCPSYWWNGE+YLGPA+L
Sbjct: 138 SIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTSCPSYWWNGERYLGPAIL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
+QAYRWIIDSRDE T RL+ L+DPF +YRCHTIMNC RTCPKGLN
Sbjct: 198 LQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPKGLN 243
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE+DPTL FRRSCREGICGSCAMNI G NTLAC I A K IYPL
Sbjct: 57 MVLDALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+ +FYAQY SI+ PW
Sbjct: 117 PHMSVIKDLVPDLTHFYAQYASIK-----PW 142
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVSK--IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K A S+ IYPLPHM V+KDLVPD+ +FYAQY SI+PW+
Sbjct: 93 GTNTLACTKAIAACGKSEVPIYPLPHMSVIKDLVPDLTHFYAQYASIKPWI 143
>gi|110635572|ref|YP_675780.1| succinate dehydrogenase iron-sulfur subunit [Chelativorans sp.
BNC1]
gi|110286556|gb|ABG64615.1| succinate dehydrogenase subunit B [Chelativorans sp. BNC1]
Length = 259
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 146/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD E P + Y VDL+ NK+D+
Sbjct: 22 EGATNLREYRIYRWSPDD-TENPRVDTYYVDLDDCGPMVLDGLIWIKNKVDSTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D + ++YPLPHM VVKDLVPD++ YAQ SI+
Sbjct: 81 REGICGSCAMNIDGANTLACTKGMDDIGGAVRVYPLPHMPVVKDLVPDLSIPYAQLSSIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++ QS +DR KLDGLYECILC CC TSCPSYWWNGE+YLGPAVL+QA
Sbjct: 141 PWLQTVTPEPA-IEWKQSHEDRAKLDGLYECILCFCCQTSCPSYWWNGERYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL++L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEATGERLDKLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKMM 254
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LI IKN++D TLTFRRSCREGICGSCAMNI G NTLAC +D ++YPLP
Sbjct: 58 MVLDGLIWIKNKVDSTLTFRRSCREGICGSCAMNIDGANTLACTKGMDDIGGAVRVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM VVKDLVPD++ YAQ SI+ PW L T+T
Sbjct: 118 HMPVVKDLVPDLSIPYAQLSSIE-----PW--LQTVT 147
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D ++YPLPHM VVKDLVPD++ YAQ SI+PWL
Sbjct: 94 GANTLACTKGMDDIGGAVRVYPLPHMPVVKDLVPDLSIPYAQLSSIEPWL 143
>gi|58579379|ref|YP_197591.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium
str. Welgevonden]
gi|58617434|ref|YP_196633.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium
str. Gardel]
gi|58417046|emb|CAI28159.1| Succinate dehydrogenase iron-sulfur protein [Ehrlichia ruminantium
str. Gardel]
gi|58418005|emb|CAI27209.1| Succinate dehydrogenase iron-sulfur protein [Ehrlichia ruminantium
str. Welgevonden]
Length = 264
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-- 160
E K F IYRW+PD D P + + +DL+ N+ID+ +
Sbjct: 29 ENAKNVKCFKIYRWSPDD-DSNPRIDTFFIDLDQCGQMVLDALIKIKNEIDSTLTFRRSC 87
Query: 161 --------------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
IYPLPHM V+KDLVPD++NFY QY+SI
Sbjct: 88 REGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLPHMNVIKDLVPDLSNFYKQYESIT 147
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PW+Q + E N + LQS++DR KLDG+Y+CILCACCSTSCPSYWWN +KYLGPA L+Q
Sbjct: 148 PWMQAE-EPSHNKERLQSIEDRSKLDGVYDCILCACCSTSCPSYWWNPDKYLGPAALLQV 206
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE + RL+ L D F +YRCHTIMNCT TCPKGLNP +AIA+IK+++
Sbjct: 207 YRWLIDSRDEASDKRLDMLDDAFKLYRCHTIMNCTNTCPKGLNPAKAIADIKQMM 261
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 99/173 (57%), Gaps = 33/173 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I +IYPLP
Sbjct: 65 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLP 124
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD++NFY QY+SI PW + + N Q
Sbjct: 125 HMNVIKDLVPDLSNFYKQYESIT-----PW-MQAEEPSHNKERLQSIEDRSKLDGVYDCI 178
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
L A S++ P+ Y WNPDK +Q Y+ ++++ +A+DK
Sbjct: 179 LCACCSTSCPS-----------YWWNPDKYLGPAALLQVYRWLIDSRDEASDK 220
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K ++ K +IYPLPHM V+KDLVPD++NFY QY+SI
Sbjct: 88 REGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLPHMNVIKDLVPDLSNFYKQYESIT 147
Query: 359 PWL 361
PW+
Sbjct: 148 PWM 150
>gi|114706938|ref|ZP_01439837.1| succinate dehydrogenase catalytic subunit [Fulvimarina pelagi
HTCC2506]
gi|114537488|gb|EAU40613.1| succinate dehydrogenase catalytic subunit [Fulvimarina pelagi
HTCC2506]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 143/229 (62%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRW+PD DE P + Y VDL+ N +D+
Sbjct: 28 REFRIYRWSPDD-DENPRLDTYYVDLDDCGPMVLDALLWIKNNVDSTLTLRRSCREGICG 86
Query: 156 ---------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D +YPLPHM VVKDLVPD+ YAQ +SI+PWL+ +
Sbjct: 87 SCAMNIDGSNTLACTKGMDEIDGSVAVYPLPHMPVVKDLVPDLTVPYAQLRSIEPWLKTE 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS +DR+KLDGLYECILC CC TSCPSYWWNGE+YLGPAVL+QAYRW+ID
Sbjct: 147 TPE-PQKEWKQSHEDREKLDGLYECILCFCCQTSCPSYWWNGERYLGPAVLLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIAEIKK++
Sbjct: 206 SRDEAKGERLDALEDPFKLYRCHTIMNCTQSCPKGLNPAKAIAEIKKMM 254
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +D TLT RRSCREGICGSCAMNI G NTLAC +D D +YPLP
Sbjct: 58 MVLDALLWIKNNVDSTLTLRRSCREGICGSCAMNIDGSNTLACTKGMDEIDGSVAVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ YAQ +SI+ PW
Sbjct: 118 HMPVVKDLVPDLTVPYAQLRSIE-----PW 142
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D D +YPLPHM VVKDLVPD+ YAQ +SI+PWL
Sbjct: 94 GSNTLACTKGMDEIDGSVAVYPLPHMPVVKDLVPDLTVPYAQLRSIEPWL 143
>gi|395781384|ref|ZP_10461802.1| succinate dehydrogenase iron-sulfur subunit [Bartonella
rattimassiliensis 15908]
gi|395420817|gb|EJF87075.1| succinate dehydrogenase iron-sulfur subunit [Bartonella
rattimassiliensis 15908]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E K F +YRW+PD +E P + Y VD + N +D
Sbjct: 22 ENATKITEFHVYRWSPDD-EENPRLDTYYVDRSACGPMVLDGLLFIKNHVDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+N FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGANTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLNRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLKTVSPEPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLFIKNHVDPTLTLRRSCREGICGSCAMNIDGANTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+N FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLNRFYAQHRVIE-----PW 142
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+N FYAQ++ I+PWL
Sbjct: 94 GANTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLNRFYAQHRVIEPWL 143
>gi|390449715|ref|ZP_10235318.1| succinate dehydrogenase iron-sulfur subunit [Nitratireductor
aquibiodomus RA22]
gi|389663671|gb|EIM75190.1| succinate dehydrogenase iron-sulfur subunit [Nitratireductor
aquibiodomus RA22]
Length = 260
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 146/236 (61%), Gaps = 51/236 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD +E P + Y +D++ NKID
Sbjct: 22 EGATNLREYKIYRWSPDD-EENPRVDTYYIDMDDCGPMVLDGLIYIKNKIDPTLTFRRSC 80
Query: 156 ------------------------DKVS----KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D+V+ KIYPLPHM VVKDLVPD++ YAQ SI
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDEVAQDAVKIYPLPHMPVVKDLVPDLSVPYAQLSSI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ ++ QS +DR KLDGLYECILC CC TSCPSYWWNGE+YLGPAVL+Q
Sbjct: 141 EPWLQTITPEPA-TEWKQSHEDRTKLDGLYECILCFCCQTSCPSYWWNGERYLGPAVLLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRW+IDSRDEKT +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIA IKK++
Sbjct: 200 AYRWLIDSRDEKTGERLDNLEDPFRLYRCHTIMNCTQACPKGLNPAKAIANIKKMM 255
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 78/109 (71%), Gaps = 10/109 (9%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC +D A D V KIYP
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVAQDAV-KIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
LPHM VVKDLVPD++ YAQ SI+ PW L T+T + ++ S
Sbjct: 117 LPHMPVVKDLVPDLSVPYAQLSSIE-----PW--LQTITPEPATEWKQS 158
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 324 ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A D V KIYPLPHM VVKDLVPD++ YAQ SI+PWL
Sbjct: 108 AQDAV-KIYPLPHMPVVKDLVPDLSVPYAQLSSIEPWL 144
>gi|57239407|ref|YP_180543.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium
str. Welgevonden]
gi|57161486|emb|CAH58412.1| succinate dehydrogenase iron-sulfur subunit [Ehrlichia ruminantium
str. Welgevonden]
Length = 258
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-- 160
E K F IYRW+PD D P + + +DL+ N+ID+ +
Sbjct: 23 ENAKNVKCFKIYRWSPDD-DSNPRIDTFFIDLDQCGQMVLDALIKIKNEIDSTLTFRRSC 81
Query: 161 --------------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
IYPLPHM V+KDLVPD++NFY QY+SI
Sbjct: 82 REGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLPHMNVIKDLVPDLSNFYKQYESIT 141
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PW+Q + E N + LQS++DR KLDG+Y+CILCACCSTSCPSYWWN +KYLGPA L+Q
Sbjct: 142 PWMQAE-EPSHNKERLQSIEDRSKLDGVYDCILCACCSTSCPSYWWNPDKYLGPAALLQV 200
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE + RL+ L D F +YRCHTIMNCT TCPKGLNP +AIA+IK+++
Sbjct: 201 YRWLIDSRDEASDKRLDMLDDAFKLYRCHTIMNCTNTCPKGLNPAKAIADIKQMM 255
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 99/173 (57%), Gaps = 33/173 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I +IYPLP
Sbjct: 59 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD++NFY QY+SI PW + + N Q
Sbjct: 119 HMNVIKDLVPDLSNFYKQYESIT-----PW-MQAEEPSHNKERLQSIEDRSKLDGVYDCI 172
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVDLNNKIDANDK 157
L A S++ P+ Y WNPDK +Q Y+ ++++ +A+DK
Sbjct: 173 LCACCSTSCPS-----------YWWNPDKYLGPAALLQVYRWLIDSRDEASDK 214
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K ++ K +IYPLPHM V+KDLVPD++NFY QY+SI
Sbjct: 82 REGICGSCAMNIDGTNTLACTKAISDIKSDVEIYPLPHMNVIKDLVPDLSNFYKQYESIT 141
Query: 359 PWL 361
PW+
Sbjct: 142 PWM 144
>gi|87200336|ref|YP_497593.1| succinate dehydrogenase iron-sulfur subunit [Novosphingobium
aromaticivorans DSM 12444]
gi|87136017|gb|ABD26759.1| succinate dehydrogenase subunit B [Novosphingobium aromaticivorans
DSM 12444]
Length = 260
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 117/143 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS + R+KLDGLYEC
Sbjct: 112 RITPLPHMEVIKDLVPDFTHFYAQYASIRPWLQTVSPTPSGKERLQSPEQREKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC CPKGL+P RAIAEIKK+
Sbjct: 232 MNCANVCPKGLSPARAIAEIKKM 254
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K E DPTLTFRRSCREGICGSCAMN+ G N LAC + I+ +I PLP
Sbjct: 58 MVLDALIKMKGEQDPTLTFRRSCREGICGSCAMNMNGRNGLACTTAIEDLSGDIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD +FYAQY SI+ PW
Sbjct: 118 HMEVIKDLVPDFTHFYAQYASIR-----PW 142
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMEVIKDLVPDFTHFYAQYASIRPWL 143
>gi|12049598|emb|CAC19855.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Arabidopsis thaliana]
Length = 279
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 140/249 (56%), Gaps = 50/249 (20%)
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------ 150
S A ++ + + KTF IYRWNPD P KP +Q Y++DL +
Sbjct: 30 STGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKI 88
Query: 151 ------------------------------------KIDANDKVSKIYPLPHMYVVKDLV 174
KI + I PLPHM+V+KDLV
Sbjct: 89 KNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLV 148
Query: 175 PDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
DM NFY QYKSI+PWL+R ++ + LQS DR KLDG+YECILCACCSTSCPSYW
Sbjct: 149 VDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYW 208
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN E YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CPKGLNPG
Sbjct: 209 WNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPG 268
Query: 294 RAIAEIKKL 302
+ I IK+L
Sbjct: 269 KQITHIKQL 277
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 90/149 (60%), Gaps = 32/149 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI + I PLP
Sbjct: 80 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNIRSFQ------------ 105
HM+V+KDLV DM NFY QYKSI+ PW K ++ AK I +
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSIE-----PWLKRKTPASVPAKEILQSKKDRAKLDGMYEC 194
Query: 106 -LSAAASSAVPAEKPAKYKTFAIYRWNPD 133
L A S++ P+ Y WNP+
Sbjct: 195 ILCACCSTSCPS-----------YWWNPE 212
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167
>gi|389796937|ref|ZP_10199983.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter sp.
116-2]
gi|388448030|gb|EIM04021.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter sp.
116-2]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 123/152 (80%), Gaps = 1/152 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D + IYPLPHM V++DLVPD +FYAQY SIQPWL+ D +G+ + LQS DRKK
Sbjct: 105 DLREGQVNIYPLPHMPVIRDLVPDFTHFYAQYASIQPWLKTDSP-VGSRERLQSPKDRKK 163
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACC+ SCPSYWWN +++LGPAVL+QAYRWI DSRDE T DRL++L DPF
Sbjct: 164 LDGLYECILCACCTASCPSYWWNPDRFLGPAVLLQAYRWISDSRDEATGDRLDELNDPFK 223
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRCH I+N T TCPKGLNP +AIA+IK+L++
Sbjct: 224 LYRCHAILNGTNTCPKGLNPAKAIAKIKRLIA 255
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD L+KIKN ++PTLT RRSCREG+CGSC+MNI G NTLAC + D + IYPL
Sbjct: 57 MVLDVLLKIKNTIEPTLTLRRSCREGVCGSCSMNINGENTLACTKSLDDLREGQVNIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V++DLVPD +FYAQY SIQ PW
Sbjct: 117 PHMPVIRDLVPDFTHFYAQYASIQ-----PW 142
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D + IYPLPHM V++DLVPD +FYAQY SIQPWL
Sbjct: 105 DLREGQVNIYPLPHMPVIRDLVPDFTHFYAQYASIQPWL 143
>gi|357974907|ref|ZP_09138878.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas sp. KC8]
Length = 261
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 118/143 (82%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SIQPWL+ + LQS +DR KLDGLYEC
Sbjct: 113 RITPLPHMDVIKDLVPDFTHFYAQYASIQPWLKTVTPPPSGKERLQSPEDRAKLDGLYEC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEFTGERLDELEDPFRLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC+ CPKGL+P RAIAEIKK+
Sbjct: 233 MNCSNVCPKGLSPARAIAEIKKM 255
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 72/97 (74%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+KNE DP+LTFRRSCREGICGSC+MN+ G N LAC + I+ +I PLP
Sbjct: 59 MVLDALIKMKNEQDPSLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDCKGEVRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM V+KDLVPD +FYAQY SIQ PW L T+T
Sbjct: 119 HMDVIKDLVPDFTHFYAQYASIQ-----PW--LKTVT 148
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SIQPWL
Sbjct: 113 RITPLPHMDVIKDLVPDFTHFYAQYASIQPWL 144
>gi|395792756|ref|ZP_10472180.1| succinate dehydrogenase iron-sulfur subunit [Bartonella vinsonii
subsp. arupensis Pm136co]
gi|423713419|ref|ZP_17687679.1| succinate dehydrogenase iron-sulfur subunit [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395423460|gb|EJF89655.1| succinate dehydrogenase iron-sulfur subunit [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395432313|gb|EJF98302.1| succinate dehydrogenase iron-sulfur subunit [Bartonella vinsonii
subsp. arupensis Pm136co]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATRLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|451941231|ref|YP_007461869.1| succinate dehydrogenase iron-sulfur protein [Bartonella australis
Aust/NH1]
gi|451900618|gb|AGF75081.1| succinate dehydrogenase iron-sulfur protein [Bartonella australis
Aust/NH1]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 147/236 (62%), Gaps = 52/236 (22%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGAERVTEFHVYRWSPDD-EENPRLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+++FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVRHPIKVYPLPSMPVVKDLVPDLSHFYAQHRVIE 140
Query: 189 PWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWLQ E + ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+Q
Sbjct: 141 PWLQTVSPEPV--KEWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 75/104 (72%), Gaps = 7/104 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVRHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSF 104
M VVKDLVPD+++FYAQ++ I+ PW L T++ + ++ +
Sbjct: 118 SMPVVKDLVPDLSHFYAQHRVIE-----PW--LQTVSPEPVKEW 154
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+++FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVRHPIKVYPLPSMPVVKDLVPDLSHFYAQHRVIEPWL 143
>gi|49476232|ref|YP_034273.1| succinate dehydrogenase iron-sulfur subunit [Bartonella henselae
str. Houston-1]
gi|49239040|emb|CAF28340.1| Succinate dehydrogenase, iron-sulfur protein [Bartonella henselae
str. Houston-1]
Length = 259
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 146/238 (61%), Gaps = 51/238 (21%)
Query: 115 PAEKPAKYKT-FAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN---- 155
P K AK T F +YRW+PD +E P + Y VD + N ID
Sbjct: 19 PKPKDAKQLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLR 77
Query: 156 ---------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYK 185
D V K+YPLP M VVKDLVPD+ FYAQ++
Sbjct: 78 RSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHR 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
I+PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L
Sbjct: 138 VIEPWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAIL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 197 LQAYRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|307191270|gb|EFN74917.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial [Camponotus floridanus]
Length = 243
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 128/159 (80%), Gaps = 2/159 (1%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKEN--IGNAQYLQSLDDRKKLDGLYE 218
IYPLPH YV++DLVPDM F Q++ I P+L+R E+ +G Q LQS DR KLDGLYE
Sbjct: 69 IYPLPHAYVIRDLVPDMEQFLEQFRQIDPYLKRPGEDNFLGMRQILQSPRDRSKLDGLYE 128
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CI+CACC+ SCP YWW G+KYLGPAVL+QAYRW+IDSRD +RL +L+D +SVYRC T
Sbjct: 129 CIMCACCTYSCPPYWWLGDKYLGPAVLLQAYRWVIDSRDMAHKERLAKLRDFYSVYRCKT 188
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTA 317
I NCT+TCPKGLNPG+AIA++K+LL+GL+ K+KP L+T
Sbjct: 189 IFNCTKTCPKGLNPGKAIAQLKRLLAGLMNKEKPDLETT 227
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 66/89 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK + DPTL++RRSCREGICG CAMNI GVNTLACI+K+ + + IYPLP
Sbjct: 14 MVLDVLELIKAQHDPTLSYRRSCREGICGCCAMNIDGVNTLACITKVKESPQPLVIYPLP 73
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGP 89
H YV++DLVPDM F Q++ I +L P
Sbjct: 74 HAYVIRDLVPDMEQFLEQFRQIDPYLKRP 102
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G++T A + K+ + + IYPLPH YV++DLVPDM F Q++ I P+L
Sbjct: 40 ICGCCAMNIDGVNTLACITKVKESPQPLVIYPLPHAYVIRDLVPDMEQFLEQFRQIDPYL 99
Query: 362 PR 363
R
Sbjct: 100 KR 101
>gi|393722649|ref|ZP_10342576.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas sp. PAMC
26605]
Length = 261
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 143/235 (60%), Gaps = 49/235 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A + + K F IYR++PD E P ++VDL++
Sbjct: 22 APEATRVKNFKIYRYDPDA-GENPHYDTFEVDLDSCGPMVLDALIKMKSEQDSSLTFRRS 80
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ +I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 81 CREGICGSCSMNIDGTNTLACTKAIEDVKGEVRITPLPHMEVIKDLVPDFTHFYAQYSSI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS +R+KLDGLYECILCACCST+CPSYWWN +K+LGPA+L+Q
Sbjct: 141 KPWLQTVTPPPSGKERLQSPAEREKLDGLYECILCACCSTACPSYWWNSDKFLGPAILLQ 200
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AYRW+ DSRDE T +RL++L+DPF +YRCHTIMNC CPKGLNP +AIAEIKK+
Sbjct: 201 AYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANVCPKGLNPAKAIAEIKKM 255
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 71/97 (73%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K+E D +LTFRRSCREGICGSC+MNI G NTLAC I+ +I PLP
Sbjct: 59 MVLDALIKMKSEQDSSLTFRRSCREGICGSCSMNIDGTNTLACTKAIEDVKGEVRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM V+KDLVPD +FYAQY SI+ PW L T+T
Sbjct: 119 HMEVIKDLVPDFTHFYAQYSSIK-----PW--LQTVT 148
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D +V +I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 95 GTNTLACTKAIEDVKGEV-RITPLPHMEVIKDLVPDFTHFYAQYSSIKPWL 144
>gi|262277894|ref|ZP_06055687.1| succinate dehydrogenase iron-sulfur subunit [alpha proteobacterium
HIMB114]
gi|262224997|gb|EEY75456.1| succinate dehydrogenase iron-sulfur subunit [alpha proteobacterium
HIMB114]
Length = 260
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 143/229 (62%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K +YRWNPDK D P + Y+VD++N
Sbjct: 28 KKVNVYRWNPDK-DANPRVDTYEVDMDNCGPMVLDALIKIKNEIDSTLTFRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID ++ ++ I PLPHM V+KDLVP++ Y QY+S++PW+Q +
Sbjct: 87 SCAMNIDGSNTLACTKSAREIKGEININPLPHMPVIKDLVPNLKQLYKQYQSVEPWMQSN 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K + G ++ LQ+++DR KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVL+QAYRWIID
Sbjct: 147 KSSNG-SEGLQTIEDRSKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLLQAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE+ RL ++ D ++RCHTIMNCT CPKGLNP +AI IKK+L
Sbjct: 206 SRDEERQKRLKKVADELKLFRCHTIMNCTNACPKGLNPAKAIGSIKKML 254
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I PLP
Sbjct: 58 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGSNTLACTKSAREIKGEININPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVP++ Y QY+S++ PW
Sbjct: 118 HMPVIKDLVPNLKQLYKQYQSVE-----PW 142
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
Y WN +K P V Y +D+ D L ++K+ + + R+C +G+
Sbjct: 33 YRWNPDKDANPRV--DTYEVDMDNCGPMVLDALIKIKNEID-----STLTFRRSCREGI- 84
Query: 292 PGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNF 350
G + G +T A K K I PLPHM V+KDLVP++
Sbjct: 85 ------------CGSCAMNIDGSNTLACTKSAREIKGEININPLPHMPVIKDLVPNLKQL 132
Query: 351 YAQYKSIQPWL 361
Y QY+S++PW+
Sbjct: 133 YKQYQSVEPWM 143
>gi|395767667|ref|ZP_10448200.1| succinate dehydrogenase iron-sulfur subunit [Bartonella doshiae
NCTC 12862]
gi|395414030|gb|EJF80483.1| succinate dehydrogenase iron-sulfur subunit [Bartonella doshiae
NCTC 12862]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATQLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M +VKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DDR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSYDDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLTFRRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M +VKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPIVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M +VKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRVIEPWL 143
>gi|197103679|ref|YP_002129056.1| succinate dehydrogenase iron-sulfur subunit [Phenylobacterium
zucineum HLK1]
gi|196477099|gb|ACG76627.1| succinate dehydrogenase, iron-sulfur protein [Phenylobacterium
zucineum HLK1]
Length = 260
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/147 (70%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
+ +I PLPHM VVKDLVPD+ FYAQY SI+PWL K ++ QS +DR+KLDGL
Sbjct: 110 QAVQISPLPHMPVVKDLVPDLTLFYAQYASIEPWLH-TKTPEPQTEWAQSPEDREKLDGL 168
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN EKYLGPA L+ AYRWIIDSRDE T +RL++L+DPF +YRC
Sbjct: 169 YECILCACCSTSCPSYWWNQEKYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRC 228
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC + CPKGLNP +AI EIKKLL
Sbjct: 229 HTIMNCAQVCPKGLNPAKAIGEIKKLL 255
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN MDPTLTFRRSCREG+CGSCAMNIGG NTLAC + + +I PL
Sbjct: 58 MVLDVLIHIKNTMDPTLTFRRSCREGVCGSCAMNIGGRNTLACTHGWEEVPGQAVQISPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+ FYAQY SI+ PW
Sbjct: 118 PHMPVVKDLVPDLTLFYAQYASIE-----PW 143
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ +I PLPHM VVKDLVPD+ FYAQY SI+PWL
Sbjct: 110 QAVQISPLPHMPVVKDLVPDLTLFYAQYASIEPWL 144
>gi|255572006|ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis]
gi|223533696|gb|EEF35431.1| succinate dehydrogenase, putative [Ricinus communis]
Length = 284
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 144/250 (57%), Gaps = 52/250 (20%)
Query: 104 FQLSAAASSAVP--AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
F S A + V A A KTF IYRWNPD P KPT+Q+YK+DL
Sbjct: 30 FHASEAEAQKVEPKASSTASLKTFQIYRWNPDNP-SKPTLQDYKIDLKECGPMVLDALIK 88
Query: 150 --NKIDANDKVSK----------------------------------IYPLPHMYVVKDL 173
N+ID + I PLPHM+V+KDL
Sbjct: 89 IKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGSTSSTITPLPHMFVIKDL 148
Query: 174 VPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
V DM NFY QYKSI+PWL+R + + + QS DR KLDG+YECILCACCSTSCPSY
Sbjct: 149 VVDMTNFYNQYKSIEPWLKRKNPPPVDGKEIPQSKKDRAKLDGMYECILCACCSTSCPSY 208
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN E YLGPA L+ A RWI DSRDE T +RL+ + D F +YRCHTI+NC R CPKGLNP
Sbjct: 209 WWNPESYLGPAALLHANRWISDSRDEYTNERLDAINDEFKLYRCHTILNCARACPKGLNP 268
Query: 293 GRAIAEIKKL 302
G+ I IK+L
Sbjct: 269 GKQIMHIKQL 278
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC++KI + S I PLP
Sbjct: 81 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGSTSSTITPLP 140
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 141 HMFVIKDLVVDMTNFYNQYKSIE-----PW 165
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 27/31 (87%)
Query: 333 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 138 PLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168
>gi|49474754|ref|YP_032796.1| succinate dehydrogenase iron-sulfur subunit [Bartonella quintana
str. Toulouse]
gi|403531052|ref|YP_006665581.1| succinate dehydrogenase iron-sulfur subunit [Bartonella quintana
RM-11]
gi|49240258|emb|CAF26728.1| Succinate dehydrogenase, iron-sulfur protein [Bartonella quintana
str. Toulouse]
gi|403233123|gb|AFR26866.1| succinate dehydrogenase iron-sulfur subunit [Bartonella quintana
RM-11]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + + VD + N ID
Sbjct: 22 EGATQLTEFHVYRWSPDD-EENPRLDTFYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCTQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|77464559|ref|YP_354063.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter
sphaeroides 2.4.1]
gi|126463399|ref|YP_001044513.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|221640470|ref|YP_002526732.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter
sphaeroides KD131]
gi|332559452|ref|ZP_08413774.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter
sphaeroides WS8N]
gi|429207117|ref|ZP_19198376.1| Succinate dehydrogenase iron-sulfur protein [Rhodobacter sp. AKP1]
gi|77388977|gb|ABA80162.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides 2.4.1]
gi|126105063|gb|ABN77741.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides ATCC
17029]
gi|221161251|gb|ACM02231.1| Succinate dehydrogenase subunit B [Rhodobacter sphaeroides KD131]
gi|332277164|gb|EGJ22479.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter
sphaeroides WS8N]
gi|428189492|gb|EKX58045.1| Succinate dehydrogenase iron-sulfur protein [Rhodobacter sp. AKP1]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 53/237 (22%)
Query: 118 KPAKYKT---FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KPA K F IYRW+PD E P + Y +D++ N++D
Sbjct: 20 KPADAKNVRKFMIYRWDPDT-GENPRVDTYFLDMDKCGPMVLDALIKIKNEVDPTLTFRR 78
Query: 156 --------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
D++ KIYPLPHM V+KDL+PD++ FYAQ+ S
Sbjct: 79 SCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVIKDLIPDLSLFYAQHAS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I PWL+ K ++ QS++DR KLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+
Sbjct: 139 IMPWLET-KTVEPAKEWRQSVEDRAKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALL 197
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 198 HAYRWIVDSRDEATPERLDMLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 7/108 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSA 108
HM V+KDL+PD++ FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVIKDLIPDLSLFYAQHASIM-----PW--LETKTVEPAKEWRQSV 158
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM V+KDL+PD++ FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEIKGDVKIYPLPHMPVIKDLIPDLSLFYAQHASIMPWL 143
>gi|319406312|emb|CBI79949.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella sp.
AR 15-3]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 145/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E F IYRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATHLTEFHIYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M ++KDLVPD+ +FYAQ+++I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPIIKDLVPDLKHFYAQHRTIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLKTVSPKPAK-EWLQSYTDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI+DSRDE + +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIVDSRDEMSGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
M ++KDLVPD+ +FYAQ+++I+ PW L T++ K + + S
Sbjct: 118 SMPIIKDLVPDLKHFYAQHRTIE-----PW--LKTVSPKPAKEWLQS 157
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M ++KDLVPD+ +FYAQ+++I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPIIKDLVPDLKHFYAQHRTIEPWL 143
>gi|84500174|ref|ZP_00998440.1| succinate dehydrogenase [Oceanicola batsensis HTCC2597]
gi|84392108|gb|EAQ04376.1| succinate dehydrogenase [Oceanicola batsensis HTCC2597]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 145/229 (63%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F IYRWNPD E P + Y +D++ N+ID
Sbjct: 28 RKFKIYRWNPDD-GETPRVDTYFLDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 156 ------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D++ IYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+
Sbjct: 87 SCAMMIDGINTLACIYGLDEIKGDVTIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLE-T 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K N ++ QS++DRKKLDGLYEC++CA CST+CPSYWWNG++YLGPA L+ AYRWIID
Sbjct: 146 KTNRPAKEWRQSIEDRKKLDGLYECVMCASCSTACPSYWWNGDRYLGPAALLHAYRWIID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP RAI+ IK+++
Sbjct: 206 SRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPARAISNIKQMM 254
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAM I G+NTLACI +D IYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMMIDGINTLACIYGLDEIKGDVTIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWRQS 157
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D IYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGLDEIKGDVTIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
>gi|395778802|ref|ZP_10459313.1| succinate dehydrogenase iron-sulfur subunit [Bartonella elizabethae
Re6043vi]
gi|423714652|ref|ZP_17688876.1| succinate dehydrogenase iron-sulfur subunit [Bartonella elizabethae
F9251]
gi|395416977|gb|EJF83329.1| succinate dehydrogenase iron-sulfur subunit [Bartonella elizabethae
Re6043vi]
gi|395430871|gb|EJF96899.1| succinate dehydrogenase iron-sulfur subunit [Bartonella elizabethae
F9251]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 142/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E K F +YRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATKLTEFHVYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|84684216|ref|ZP_01012118.1| succinate dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
gi|84667969|gb|EAQ14437.1| succinate dehydrogenase [Rhodobacterales bacterium HTCC2654]
Length = 259
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 141/233 (60%), Gaps = 50/233 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------- 150
E + F IYRW PD + P + Y VD++
Sbjct: 22 EGAKNVRKFLIYRWTPDD-GQNPRVDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 151 ----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
ID + ++ KIYPLPHM VV+DLVPD+ +FYAQ+ SI
Sbjct: 81 REGICGSCAMNIDGGNHLACIYGLDEIKGDVKIYPLPHMDVVRDLVPDLTHFYAQHASIM 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ K N ++ QS++DRKKLDGLYEC++CA CS SCPSYWWN E+YLGPA L+ A
Sbjct: 141 PWLE-TKTNAPAKEWRQSIEDRKKLDGLYECVMCASCSASCPSYWWNSERYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK
Sbjct: 200 YRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAQTCPKGLNPAKAIAEIKK 252
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LACI +D KIYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGLDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VV+DLVPD+ +FYAQ+ SI PW
Sbjct: 118 HMDVVRDLVPDLTHFYAQHASIM-----PW 142
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A ++ +D KIYPLPHM VV+DLVPD+ +FYAQ+ SI PWL
Sbjct: 95 GNHLACIYGLDEIKGDVKIYPLPHMDVVRDLVPDLTHFYAQHASIMPWL 143
>gi|148554225|ref|YP_001261807.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas wittichii
RW1]
gi|148499415|gb|ABQ67669.1| succinate dehydrogenase subunit B [Sphingomonas wittichii RW1]
Length = 261
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 117/144 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SIQPWL+ + LQS DDR KLDGLYEC
Sbjct: 113 RITPLPHMDVIKDLVPDFTHFYAQYASIQPWLKTVTPAPSGKERLQSPDDRNKLDGLYEC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC CPKGL+P +AI EIKK++
Sbjct: 233 MNCANVCPKGLSPAKAIGEIKKMV 256
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E DP++TFRRSCREGICGSC+MN+ G N LAC + I+ +I PLP
Sbjct: 59 MVLDALIKIKSEQDPSVTFRRSCREGICGSCSMNMNGKNGLACTTAIEDCKGEVRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM V+KDLVPD +FYAQY SIQ PW L T+T
Sbjct: 119 HMDVIKDLVPDFTHFYAQYASIQ-----PW--LKTVT 148
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SIQPWL
Sbjct: 113 RITPLPHMDVIKDLVPDFTHFYAQYASIQPWL 144
>gi|195627854|gb|ACG35757.1| succinate dehydrogenase iron-sulfur protein,mitochondrial precursor
[Zea mays]
Length = 282
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 138/232 (59%), Gaps = 49/232 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF+IYRW+PD P KP +++Y+VDL++
Sbjct: 47 KTFSIYRWDPDSPSTKPHLKDYQVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 106
Query: 151 ----------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR- 193
KI S + PLPHM+VVKDLV DM NFY+QYKS++PWL+R
Sbjct: 107 SCAMNIDGDNGLACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPWLKRK 166
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D+ + Q+ DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI
Sbjct: 167 DQPPQQGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQ 226
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRD+ T +RL+ + D F +YRCHTI NCT CPKGLNP + I IKKL G
Sbjct: 227 DSRDQFTKERLDAINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 278
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI S + PLP
Sbjct: 78 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISGASSASTVSPLP 137
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+VVKDLV DM NFY+QYKS++ PW
Sbjct: 138 HMFVVKDLVVDMTNFYSQYKSVE-----PW 162
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI S + PLPHM+VVKDLV DM NFY+QYKS++PWL R
Sbjct: 119 ACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPWLKR 165
>gi|326387478|ref|ZP_08209087.1| succinate dehydrogenase iron-sulfur subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208134|gb|EGD58942.1| succinate dehydrogenase iron-sulfur subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 262
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 117/143 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS + R+KLDGLYEC
Sbjct: 114 RITPLPHMQVIKDLVPDFTHFYAQYASIRPWLQTVSPTPSGKERLQSPEQREKLDGLYEC 173
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +++LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 174 ILCACCSTSCPSYWWNSDRFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTI 233
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC CPKGL+P RAIAEIKK+
Sbjct: 234 MNCANVCPKGLSPARAIAEIKKM 256
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K+E+DP+LTFRRSCREGICGSCAMN+ G N LAC + I+ +I PLP
Sbjct: 60 MVLDALIKMKSELDPSLTFRRSCREGICGSCAMNLNGRNGLACTTAIEDLKGEIRITPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD +FYAQY SI+ PW
Sbjct: 120 HMQVIKDLVPDFTHFYAQYASIR-----PW 144
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 114 RITPLPHMQVIKDLVPDFTHFYAQYASIRPWL 145
>gi|226442031|gb|ACO57605.1| succinate dehydrogenase complex subunit B [Gillichthys seta]
Length = 241
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 151/234 (64%), Gaps = 58/234 (24%)
Query: 98 AKNIRSFQLSAA-------ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN- 149
+KN+ +F+ + A ++A PA +P + K F IYRW+PD +KP MQ Y+++L+
Sbjct: 9 SKNVLAFRNAGAIMLVRYAQTAAAPAPEP-RIKKFQIYRWDPDTAGDKPRMQTYEINLDT 67
Query: 150 -----------------------------------------------NKIDAN-DKVSKI 161
NKID N K +KI
Sbjct: 68 CGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKI 127
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECI 220
YPLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ G QY QS++DR+KLDGLYECI
Sbjct: 128 YPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDESQEGKNQYYQSVEDRQKLDGLYECI 187
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
LCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL++L+DPFS+Y
Sbjct: 188 LCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLSKLQDPFSLY 241
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC++KID N K +KIYPL
Sbjct: 71 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKPTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 131 PHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 63/122 (51%), Gaps = 24/122 (19%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y +D+ D L ++K DP +R +C +N G +A
Sbjct: 58 MQTYEINLDTCGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLA----- 112
Query: 303 LSGLVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
L+KID N K +KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L
Sbjct: 113 ---------------CLNKIDTNTSKPTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 157
Query: 362 PR 363
+
Sbjct: 158 KK 159
>gi|225452228|ref|XP_002268523.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
1, mitochondrial [Vitis vinifera]
Length = 276
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 149/253 (58%), Gaps = 50/253 (19%)
Query: 98 AKNIRS-FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
AK +RS + A SS V +E KTF+IYRWNPD P KP +Q Y+++L
Sbjct: 18 AKLLRSRAHATGAQSSEVNSEVAKTLKTFSIYRWNPDNPS-KPELQNYQINLKDCGPMVL 76
Query: 150 -------NKIDA---------------------------------NDKVSKIYPLPHMYV 169
N++D + + S + PLPHM+V
Sbjct: 77 DALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGESSTVTPLPHMFV 136
Query: 170 VKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYL-QSLDDRKKLDGLYECILCACCSTS 228
+KDLV DM NFY QYKSI+PWL+R + + QS DR KLDG+YECILCACCSTS
Sbjct: 137 IKDLVVDMTNFYNQYKSIEPWLKRKTPPPTPGKEIPQSKKDRAKLDGMYECILCACCSTS 196
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWN E YLGPA L+ A RWI DSRDE T +RL+ + D F +YRCHTI+NC R CPK
Sbjct: 197 CPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAVCDEFKLYRCHTILNCARACPK 256
Query: 289 GLNPGRAIAEIKK 301
GLNPG+ IA IK+
Sbjct: 257 GLNPGKQIATIKQ 269
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G N LAC++KI + + S + PLP
Sbjct: 74 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGES-STVTPLP 132
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 133 HMFVIKDLVVDMTNFYNQYKSIE-----PW 157
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + + S + PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 115 ACLTKIPSGES-STVTPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 160
>gi|4803711|emb|CAB42659.1| iron sulfur subunit of succinate dehydrogenase [Zea mays]
gi|224031477|gb|ACN34814.1| unknown [Zea mays]
gi|413921407|gb|AFW61339.1| succinate dehydrogenase iron-sulfur protein [Zea mays]
Length = 282
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 138/232 (59%), Gaps = 49/232 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF+IYRW+PD P KP +++Y+VDL++
Sbjct: 47 KTFSIYRWDPDSPSTKPHLKDYQVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 106
Query: 151 ----------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR- 193
KI S + PLPHM+VVKDLV DM NFY+QYKS++PWL+R
Sbjct: 107 SCAMNIDGDNGLACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPWLKRK 166
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D+ + Q+ DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI
Sbjct: 167 DQPPQQGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQ 226
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRD+ T +RL+ + D F +YRCHTI NCT CPKGLNP + I IKKL G
Sbjct: 227 DSRDQFTKERLDAINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 278
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI S + PLP
Sbjct: 78 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISGASSASTVSPLP 137
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+VVKDLV DM NFY+QYKS++ PW
Sbjct: 138 HMFVVKDLVVDMTNFYSQYKSVE-----PW 162
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI S + PLPHM+VVKDLV DM NFY+QYKS++PWL R
Sbjct: 119 ACLTKISGASSASTVSPLPHMFVVKDLVVDMTNFYSQYKSVEPWLKR 165
>gi|146276148|ref|YP_001166307.1| succinate dehydrogenase iron-sulfur subunit [Rhodobacter
sphaeroides ATCC 17025]
gi|145554389|gb|ABP69002.1| succinate dehydrogenase subunit B [Rhodobacter sphaeroides ATCC
17025]
Length = 258
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 148/237 (62%), Gaps = 50/237 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
P + + F IYRW+PD E P + Y +D++ N++D
Sbjct: 19 PKPEGRNVRKFMIYRWDPDT-GENPRVDTYFLDMDKCGPMVLDALIKIKNEVDPTLTFRR 77
Query: 156 --------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKS 186
D++ KIYPLPHM V+KDL+PD++ FYAQ+ S
Sbjct: 78 SCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVIKDLIPDLSLFYAQHAS 137
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I PWL+ K ++ QS++DR KLDGLYEC++CACCSTSCPSYWWNG++YLGPA L+
Sbjct: 138 IMPWLE-TKTVEPAKEWRQSVEDRAKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALL 196
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI+DSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKK++
Sbjct: 197 HAYRWIVDSRDEATPERLDMLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMM 253
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 7/108 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 57 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSA 108
HM V+KDL+PD++ FYAQ+ SI PW L T T + + ++ S
Sbjct: 117 HMPVIKDLIPDLSLFYAQHASIM-----PW--LETKTVEPAKEWRQSV 157
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM V+KDL+PD++ FYAQ+ SI PWL
Sbjct: 93 GINTLACIYGLDEIKGDVKIYPLPHMPVIKDLIPDLSLFYAQHASIMPWL 142
>gi|254562945|ref|YP_003070040.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium
extorquens DM4]
gi|254270223|emb|CAX26217.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium
extorquens DM4]
Length = 274
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
D +IYPLPHM V+KDLVPD+ NFYAQ+ SI+PWLQ + ++ Q+ +DR +LDG
Sbjct: 123 DGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIEPWLQTETP-APEKEWKQTPEDRARLDG 181
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACC+TSCPSYWWNG+K+LGPA L+QAYRW+IDSRDE T +RL+ L DPF +YR
Sbjct: 182 LYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLYR 241
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
CHTIMNC TCPK LNP +AIAEIKK++
Sbjct: 242 CHTIMNCANTCPKNLNPAKAIAEIKKMM 269
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 69/105 (65%), Gaps = 20/105 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----------- 49
MVLDAL+ IKN++DPTL FRRSCREGICGSCAMNI G N LAC ID
Sbjct: 58 MVLDALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFL 117
Query: 50 ----NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
D +IYPLPHM V+KDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 TRKDKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIE-----PW 157
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P + YR D D L +K DP V+R R+C +
Sbjct: 33 YRWNPDDGKNPRI--DTYRVDRDDCGPMVLDALLWIKNKVDPTLVFR--------RSCRE 82
Query: 289 GLNPGRAI-AEIKKLLSGLVKKDKPGLDTAALHKIDANDK--VSKIYPLPHMYVVKDLVP 345
G+ A+ E + L+ + D+ AL + DK +IYPLPHM V+KDLVP
Sbjct: 83 GICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRKDKDGAVRIYPLPHMPVLKDLVP 142
Query: 346 DMNNFYAQYKSIQPWL 361
D+ NFYAQ+ SI+PWL
Sbjct: 143 DLTNFYAQHASIEPWL 158
>gi|158425370|ref|YP_001526662.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Azorhizobium caulinodans ORS 571]
gi|158332259|dbj|BAF89744.1| succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Azorhizobium caulinodans ORS 571]
Length = 261
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 142/233 (60%), Gaps = 52/233 (22%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN----------- 155
K F +YRWNPD + P++ Y VD + N ID
Sbjct: 26 KVTEFRVYRWNPDD-GKNPSIDTYYVDREACGPMVLDGLIYIKNHIDPTLTFRRSCREGV 84
Query: 156 --------------------DKV-----SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
D+V IYPLPHM VVKDLVPD+ FYAQ+ SI+PW
Sbjct: 85 CGSCAMNIGGTNTLACTKGMDEVLVKGSVNIYPLPHMEVVKDLVPDLTRFYAQHASIEPW 144
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
LQ D ++ QS +DR++LDGLYECILCACCSTSCPSYWWNG++YLGPA L+QA R
Sbjct: 145 LQTDSA-APEKEWRQSKEDRERLDGLYECILCACCSTSCPSYWWNGDRYLGPAALLQANR 203
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
W+ DSRDE+T RL+ L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKK++
Sbjct: 204 WLKDSRDERTGARLDNLEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKKMM 256
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 67/92 (72%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNIGG NTLAC +D IYP
Sbjct: 58 MVLDGLIYIKNHIDPTLTFRRSCREGVCGSCAMNIGGTNTLACTKGMDEVLVKGSVNIYP 117
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM VVKDLVPD+ FYAQ+ SI+ PW
Sbjct: 118 LPHMEVVKDLVPDLTRFYAQHASIE-----PW 144
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 27/31 (87%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM VVKDLVPD+ FYAQ+ SI+PWL
Sbjct: 115 IYPLPHMEVVKDLVPDLTRFYAQHASIEPWL 145
>gi|300120272|emb|CBK19826.2| unnamed protein product [Blastocystis hominis]
Length = 265
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 143/241 (59%), Gaps = 51/241 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
+K YK F I+R+NPDK D KP ++Y +DLN+
Sbjct: 25 GQKRPSYKLFTIFRYNPDK-DVKPHYEKYVIDLNDCGTMVLDALFKIKNEQDPTFAFRRS 83
Query: 151 -----------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
KI ++KV + PLPHM+V+KDL+PDM NFY QY SI
Sbjct: 84 CREGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLPHMFVIKDLIPDMTNFYEQYASI 143
Query: 188 QPWLQRDKENIGN--AQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
+PWLQ+ + + LQS +DR LDGLYECILCACCSTSCPSYWW+G+KYLGP++L
Sbjct: 144 KPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSIL 203
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
QAYRWI DSRDE T +RL L D + +YRCH IMNCT CPK LNPGR+I ++K +
Sbjct: 204 QQAYRWIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKHAIHK 263
Query: 306 L 306
+
Sbjct: 264 M 264
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 93/155 (60%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE DPT FRRSCREGICGSCAMNI G N LAC++KI ++KV + PLP
Sbjct: 62 MVLDALFKIKNEQDPTFAFRRSCREGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLP 121
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM+V+KDL+PDM NFY QY SI+ L + +N++S + L A
Sbjct: 122 HMFVIKDLIPDMTNFYEQYASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCA 181
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY +I YRW D DE
Sbjct: 182 CCSTSCPSYWWHGDKYLGPSILQQAYRWIADSRDE 216
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI ++KV + PLPHM+V+KDL+PDM NFY QY SI+PWL +
Sbjct: 103 ACLTKIPKDNKVCTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQK 149
>gi|163853010|ref|YP_001641053.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium extorquens PA1]
gi|218531820|ref|YP_002422636.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium extorquens CM4]
gi|240140351|ref|YP_002964830.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium
extorquens AM1]
gi|418059574|ref|ZP_12697518.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium extorquens DSM 13060]
gi|27902659|gb|AAO24622.1| succinate dehydrogenase beta subunit [Methylobacterium extorquens]
gi|163664615|gb|ABY31982.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium extorquens PA1]
gi|218524123|gb|ACK84708.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium extorquens CM4]
gi|240010327|gb|ACS41553.1| succinate dehydrogenase, iron-sulfur subunit [Methylobacterium
extorquens AM1]
gi|373566838|gb|EHP92823.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium extorquens DSM 13060]
Length = 274
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
D +IYPLPHM V+KDLVPD+ NFYAQ+ SI+PWLQ + ++ Q+ +DR +LDG
Sbjct: 123 DGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIEPWLQTETP-APEKEWKQTPEDRARLDG 181
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACC+TSCPSYWWNG+K+LGPA L+QAYRW+IDSRDE T +RL+ L DPF +YR
Sbjct: 182 LYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLYR 241
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
CHTIMNC TCPK LNP +AIAEIKK++
Sbjct: 242 CHTIMNCANTCPKNLNPAKAIAEIKKMM 269
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 69/105 (65%), Gaps = 20/105 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----------- 49
MVLDAL+ IKN++DPTL FRRSCREGICGSCAMNI G N LAC ID
Sbjct: 58 MVLDALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFL 117
Query: 50 ----NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
D +IYPLPHM V+KDLVPD+ NFYAQ+ SI+ PW
Sbjct: 118 TRKDKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHASIE-----PW 157
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P + YR D D L +K DP V+R R+C +
Sbjct: 33 YRWNPDDGKNPRI--DTYRVDRDDCGPMVLDALLWIKNKVDPTLVFR--------RSCRE 82
Query: 289 GLNPGRAI-AEIKKLLSGLVKKDKPGLDTAALHKIDANDK--VSKIYPLPHMYVVKDLVP 345
G+ A+ E + L+ + D+ AL + DK +IYPLPHM V+KDLVP
Sbjct: 83 GICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRKDKDGAVRIYPLPHMPVLKDLVP 142
Query: 346 DMNNFYAQYKSIQPWL 361
D+ NFYAQ+ SI+PWL
Sbjct: 143 DLTNFYAQHASIEPWL 158
>gi|85708776|ref|ZP_01039842.1| succinate dehydrogenase [Erythrobacter sp. NAP1]
gi|85690310|gb|EAQ30313.1| succinate dehydrogenase [Erythrobacter sp. NAP1]
Length = 260
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 146/237 (61%), Gaps = 49/237 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID-------- 153
A+ + K+F +YR++PD E P ++++DL+ N+ID
Sbjct: 21 ADGAKRVKSFKVYRYDPDS-GENPRYDKFEIDLDDCGPMVLDALLKIKNEIDPTLTFRRS 79
Query: 154 ---------------ANDKVS-----------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
AN +I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 80 CREGICGSCSMNLNGANGLACTTAIEDLKGEIRITPLPHMDVIKDLVPDFTHFYAQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQ+ + R+KLDGLYECILCACCSTSCPSYWWN +K+LGPA+L+Q
Sbjct: 140 RPWLQTVSPTPSGKERLQTPEQREKLDGLYECILCACCSTSCPSYWWNSDKFLGPAILLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
AYRW+ DSRDE T +RLN+L+DPF +YRCHTIMNC CPKGL+P +AIAE KK+++
Sbjct: 200 AYRWLADSRDEMTGERLNELEDPFRLYRCHTIMNCANVCPKGLSPAKAIAETKKMMA 256
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+DPTLTFRRSCREGICGSC+MN+ G N LAC + I+ +I PLP
Sbjct: 58 MVLDALLKIKNEIDPTLTFRRSCREGICGSCSMNLNGANGLACTTAIEDLKGEIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD +FYAQY SI+ PW
Sbjct: 118 HMDVIKDLVPDFTHFYAQYASIR-----PW 142
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMDVIKDLVPDFTHFYAQYASIRPWL 143
>gi|395788062|ref|ZP_10467638.1| succinate dehydrogenase iron-sulfur subunit [Bartonella birtlesii
LL-WM9]
gi|260446906|emb|CBG76060.1| succinate dehydrogenase iron-sulfur subunit [Bartonella birtlesii]
gi|395409844|gb|EJF76429.1| succinate dehydrogenase iron-sulfur subunit [Bartonella birtlesii
LL-WM9]
Length = 259
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 143/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F IYRW+PD +E P + Y VD + N ID
Sbjct: 22 EGATQLTEFHIYRWSPDD-EENPHLDTYYVDRSACGPMILDGLLFIKNHIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ +FYAQ++ I+
Sbjct: 81 REGICGSCSMNIDGANTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKHFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLTFRRSCREGICGSC+MNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTFRRSCREGICGSCSMNIDGANTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ +FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKHFYAQHRVIE-----PW 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K +D K+YPLP M VVKDLVPD+ +FYAQ++ I+
Sbjct: 81 REGICGSCSMNIDGANTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKHFYAQHRVIE 140
Query: 359 PWL 361
PWL
Sbjct: 141 PWL 143
>gi|352080488|ref|ZP_08951427.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodanobacter sp. 2APBS1]
gi|351683769|gb|EHA66845.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodanobacter sp. 2APBS1]
Length = 259
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 123/152 (80%), Gaps = 1/152 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D + IYPLPHM V++DLVPD +FYAQY SIQPWL+ D +G+ + LQS DRK+
Sbjct: 105 DLREGQVNIYPLPHMPVIRDLVPDFTHFYAQYASIQPWLKTDSP-VGSRERLQSPKDRKQ 163
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACC+ SCPSYWWN +++LGPAVL+QAYRWI DSRDE T DRL++L DPF
Sbjct: 164 LDGLYECILCACCTASCPSYWWNPDRFLGPAVLLQAYRWISDSRDEATGDRLDELNDPFK 223
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+YRCH I+N T TCPKGLNP +AIA+IK+L++
Sbjct: 224 LYRCHAILNGTNTCPKGLNPAKAIAKIKRLIA 255
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD L+KIKN ++PTLT RRSCREG+CGSC+MNI G NTLAC + D + IYPL
Sbjct: 57 MVLDVLLKIKNTIEPTLTLRRSCREGVCGSCSMNINGENTLACTKSLDDLREGQVNIYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V++DLVPD +FYAQY SIQ PW
Sbjct: 117 PHMPVIRDLVPDFTHFYAQYASIQ-----PW 142
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D + IYPLPHM V++DLVPD +FYAQY SIQPWL
Sbjct: 105 DLREGQVNIYPLPHMPVIRDLVPDFTHFYAQYASIQPWL 143
>gi|395490320|ref|ZP_10421899.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas sp. PAMC
26617]
gi|404254397|ref|ZP_10958365.1| succinate dehydrogenase iron-sulfur subunit [Sphingomonas sp. PAMC
26621]
Length = 261
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 117/143 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS +R+KLDGLYEC
Sbjct: 113 RITPLPHMEVIKDLVPDFTHFYAQYSSIKPWLQTVTPPPAGKERLQSPQEREKLDGLYEC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCST+CPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 173 ILCACCSTACPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC CPKGLNP +AIAEIKK+
Sbjct: 233 MNCANVCPKGLNPAKAIAEIKKM 255
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K E D +LTFRRSCREGICGSC+MNI G N LAC + I+ +I PLP
Sbjct: 59 MVLDALIKMKGEQDSSLTFRRSCREGICGSCSMNIDGKNGLACTTAIEDVKGDIRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
HM V+KDLVPD +FYAQY SI+ PW L T+T
Sbjct: 119 HMEVIKDLVPDFTHFYAQYSSIK-----PW--LQTVT 148
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 113 RITPLPHMEVIKDLVPDFTHFYAQYSSIKPWL 144
>gi|319404827|emb|CBI78428.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella
rochalimae ATCC BAA-1498]
Length = 259
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 150/244 (61%), Gaps = 53/244 (21%)
Query: 110 ASSAVPAEKPAKYKT-FAIYRWNPDKPDEK-PTMQEYKVD--------------LNNKID 153
A P + A + T F IYRW+PD DEK P + Y VD + N ID
Sbjct: 14 AGKVWPKPEGATHLTEFHIYRWSPD--DEKNPHLDTYYVDRSLCGPMILDGLLFIKNHID 71
Query: 154 AN-------------------------------DKVS---KIYPLPHMYVVKDLVPDMNN 179
D V K+YPLP M +VKDLVPD+
Sbjct: 72 PTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKR 131
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FYAQ+++I+PWL+ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++Y
Sbjct: 132 FYAQHRAIEPWLKTVSPKPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRY 190
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPAVL+QAYRWI+DSRDE + +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEI
Sbjct: 191 LGPAVLLQAYRWIVDSRDEMSGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEI 250
Query: 300 KKLL 303
KKL+
Sbjct: 251 KKLM 254
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 7/104 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSF 104
M +VKDLVPD+ FYAQ+++I+ PW L T++ K + +
Sbjct: 118 SMPIVKDLVPDLKRFYAQHRAIE-----PW--LKTVSPKPAKEW 154
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M +VKDLVPD+ FYAQ+++I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRAIEPWL 143
>gi|431806094|ref|YP_007232995.1| Succinate dehydrogenase iron-sulfur protein [Liberibacter crescens
BT-1]
gi|430800069|gb|AGA64740.1| Succinate dehydrogenase iron-sulfur protein [Liberibacter crescens
BT-1]
Length = 259
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 144/229 (62%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVS--------- 159
+ + IYRW+PD E P + Y VD++ NKID +
Sbjct: 28 REYRIYRWSPDD-QENPRIDTYYVDVDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86
Query: 160 -------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
KIYPLPHM VVKDLV DM +FYAQ++SI+PWL+
Sbjct: 87 SCGMNIDGTNTLACTKEMKDVKGSIKIYPLPHMSVVKDLVIDMTHFYAQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
N ++ QS +DR+KLDGLYECI+CACCSTSCPSYWWNG++YLGPA+L+QAYRW+ID
Sbjct: 147 SPAPAN-EWFQSHEDRQKLDGLYECIMCACCSTSCPSYWWNGDRYLGPAILLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ ++DPF +YRCHTIMNC + CPKGLNP +AIAEIK ++
Sbjct: 206 SRDEAKGERLDNIEDPFRLYRCHTIMNCAQACPKGLNPAKAIAEIKIMM 254
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSC MNI G NTLAC ++ KIYPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACTKEMKDVKGSIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLV DM +FYAQ++SI+ PW
Sbjct: 118 HMSVVKDLVIDMTHFYAQHRSIE-----PW 142
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K + K S KIYPLPHM VVKDLV DM +FYAQ++SI+PWL
Sbjct: 94 GTNTLACTKEMKDVKGSIKIYPLPHMSVVKDLVIDMTHFYAQHRSIEPWL 143
>gi|384249640|gb|EIE23121.1| succinate dehydrogenase and fumarate r [Coccomyxa subellipsoidea
C-169]
Length = 234
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
D +K+ PLPHM+V+KDLV DM+NFYAQYKSI P+LQ+ + G +Y QS +DR KLDG
Sbjct: 82 DTKTKVAPLPHMFVIKDLVVDMSNFYAQYKSINPFLQKKDPSSGK-EYYQSREDRNKLDG 140
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACCSTSCPSYWWN +KYLGPAVL+QAYRWIIDSRD+ T +R+ QL D + +YR
Sbjct: 141 LYECILCACCSTSCPSYWWNEDKYLGPAVLLQAYRWIIDSRDDFTEERIAQLDDAYKLYR 200
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKK 301
CHTIMNC + CPKGLNPG+AIA+IK+
Sbjct: 201 CHTIMNCAKVCPKGLNPGKAIAKIKQ 226
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LD L KIK+E DPTL FRRSCREGICGSCAMNI G N LAC++K++ + D +K+ PL
Sbjct: 31 MMLDVLFKIKDEQDPTLAFRRSCREGICGSCAMNINGTNCLACLTKVERSPDTKTKVAPL 90
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+V+KDLV DM+NFYAQYKSI L
Sbjct: 91 PHMFVIKDLVVDMSNFYAQYKSINPFL 117
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L K++ + D +K+ PLPHM+V+KDLV DM+NFYAQYKSI P+L +
Sbjct: 72 ACLTKVERSPDTKTKVAPLPHMFVIKDLVVDMSNFYAQYKSINPFLQK 119
>gi|310814652|ref|YP_003962616.1| succinate dehydrogenase [Ketogulonicigenium vulgare Y25]
gi|308753387|gb|ADO41316.1| succinate dehydrogenase [Ketogulonicigenium vulgare Y25]
Length = 259
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 121/144 (84%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+IYPLPHM V+KDLVPD+ +FYAQ+ SI PWL+ K N ++ QS++DRKKLDGLYEC
Sbjct: 112 RIYPLPHMPVIKDLVPDLTHFYAQHASIMPWLE-TKTNTPQKEWRQSIEDRKKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CA CST+CPSYWWN ++YLGPA L+ AYRWIIDSRDE T +RL++L+DPF +YRCHTI
Sbjct: 171 VMCASCSTACPSYWWNSDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP AI+ IKK++
Sbjct: 231 MNCAKTCPKGLNPAEAISHIKKMM 254
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI +D +IYPLP
Sbjct: 58 MVLDVLIKIKNEIDPTLTFRRSCREGICGSCAMNIDGQNTLACIYGLDEIRGDIRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLVPD+ +FYAQ+ SI PW
Sbjct: 118 HMPVIKDLVPDLTHFYAQHASIM-----PW 142
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A ++ +D +IYPLPHM V+KDLVPD+ +FYAQ+ SI PWL
Sbjct: 99 ACIYGLDEIRGDIRIYPLPHMPVIKDLVPDLTHFYAQHASIMPWL 143
>gi|90421158|ref|ZP_01229060.1| succinate dehydrogenase iron-sulfur protein [Aurantimonas
manganoxydans SI85-9A1]
gi|90334650|gb|EAS48430.1| succinate dehydrogenase iron-sulfur protein [Aurantimonas
manganoxydans SI85-9A1]
Length = 259
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 149/238 (62%), Gaps = 53/238 (22%)
Query: 117 EKPA---KYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN---- 155
+KPA + F IYRW+PD +E P Y VD + NK+D+
Sbjct: 19 DKPAGATNVREFKIYRWSPDD-EENPRTDTYYVDTDDCGPMVLDALLWIKNKVDSTLSLR 77
Query: 156 ---------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYK 185
D++ K+YPLPHM V+KDL+PD+ Y Q +
Sbjct: 78 RSCREGICGSCAMNIDGSNTLACTKGMDEIRGAVKVYPLPHMPVIKDLIPDLTVPYTQLR 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PWL+ D ++ QS +DR+KLDGLYECILC CC TSCPSYWWNG++YLGPAVL
Sbjct: 138 SIEPWLKTDTPE-PEREWRQSHEDREKLDGLYECILCFCCQTSCPSYWWNGDRYLGPAVL 196
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIAEI+K++
Sbjct: 197 LQAYRWLIDSRDEATGERLDDLEDPFKLYRCHTIMNCTQSCPKGLNPAKAIAEIRKMM 254
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++D TL+ RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDALLWIKNKVDSTLSLRRSCREGICGSCAMNIDGSNTLACTKGMDEIRGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM V+KDL+PD+ Y Q +SI+ PW L T T + R ++ S
Sbjct: 118 HMPVIKDLIPDLTVPYTQLRSIE-----PW--LKTDTPEPEREWRQS 157
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLPHM V+KDL+PD+ Y Q +SI+PWL
Sbjct: 94 GSNTLACTKGMDEIRGAVKVYPLPHMPVIKDLIPDLTVPYTQLRSIEPWL 143
>gi|121601659|ref|YP_988429.1| succinate dehydrogenase iron-sulfur subunit [Bartonella
bacilliformis KC583]
gi|421760249|ref|ZP_16197068.1| succinate dehydrogenase iron-sulfur subunit [Bartonella
bacilliformis INS]
gi|120613836|gb|ABM44437.1| succinate dehydrogenase iron-sulfur protein [Bartonella
bacilliformis KC583]
gi|411175966|gb|EKS45987.1| succinate dehydrogenase iron-sulfur subunit [Bartonella
bacilliformis INS]
Length = 259
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 146/243 (60%), Gaps = 51/243 (20%)
Query: 110 ASSAVPAEKPAKYKT-FAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDA 154
A P + AK T F IYRW+PD DE P + Y VD + N ID
Sbjct: 14 AGKVWPRPEGAKQLTEFQIYRWSPDD-DENPRLDTYYVDRSACGPMVLDGLLFIKNHIDP 72
Query: 155 N-------------------------------DKVS---KIYPLPHMYVVKDLVPDMNNF 180
D V K+YPLP M VVKDLVPD+ +F
Sbjct: 73 TLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKHF 132
Query: 181 YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL 240
YAQ++ I+PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YL
Sbjct: 133 YAQHRVIEPWLQTVSPEPAK-EWLQSHADRQKIDGLYECILCACCQTSCPSYWWNGDRYL 191
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
GPA+L+QAYRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AI EIK
Sbjct: 192 GPAILLQAYRWIADSRDEMRGERLDNLEDPFRLYRCHTIMNCMQTCPKGLNPAKAITEIK 251
Query: 301 KLL 303
KL+
Sbjct: 252 KLM 254
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 7/109 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAA 109
M VVKDLVPD+ +FYAQ++ I+ PW L T++ + + + S A
Sbjct: 118 SMPVVKDLVPDLKHFYAQHRVIE-----PW--LQTVSPEPAKEWLQSHA 159
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ +FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKHFYAQHRVIEPWL 143
>gi|340034804|gb|AEK28745.1| SdhB [Botryotinia fuckeliana]
Length = 176
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 120/146 (82%)
Query: 159 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
+KIYPLPH YVVKD+VPD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYE
Sbjct: 30 TKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYE 89
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHT
Sbjct: 90 CILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHT 149
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NC+RTCPKGLNPG AIAEIKK ++
Sbjct: 150 ILNCSRTCPKGLNPGLAIAEIKKEMA 175
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 26 GICGSCAMNIGGVNTLACISKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQR 84
GICGSCAMNI GVNTLAC+ +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+
Sbjct: 1 GICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKP 60
Query: 85 HLG-------GPWKILGTLTAKNIRSFQ---LSAAASSAVPAE--KPAKYKTFAI----Y 128
+L G + K + L A S++ P+ +Y AI Y
Sbjct: 61 YLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSY 120
Query: 129 RWNPDKPDEKPTMQEYKVDLNNKI 152
RW D D+K +E K L+N +
Sbjct: 121 RWLADSRDQK--KEERKAALDNSM 142
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L +
Sbjct: 12 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQHT 65
>gi|365855386|ref|ZP_09395439.1| succinate dehydrogenase iron-sulfur subunit [Acetobacteraceae
bacterium AT-5844]
gi|363719221|gb|EHM02532.1| succinate dehydrogenase iron-sulfur subunit [Acetobacteraceae
bacterium AT-5844]
Length = 260
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 122/152 (80%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
I+ K +I PLPHM VVKDLVPD++ YAQ +S++PWL+ D + + LQS ++R
Sbjct: 104 IEEVKKDVRITPLPHMPVVKDLVPDLSQIYAQLRSVEPWLKSDTAPPPDGERLQSKEERA 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGL+ECILC CCSTSCPSYWWNG++YLGPAVL+QAYRWI DSRDE T +RL+ L+DPF
Sbjct: 164 KLDGLWECILCFCCSTSCPSYWWNGDRYLGPAVLLQAYRWIADSRDEATGERLDNLEDPF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNCT TCPKGLNP +AI IK++L
Sbjct: 224 RLYRCHTIMNCTATCPKGLNPAKAIGSIKQML 255
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE D TLTFRRSCREGICGSCAMNI G+NTLAC+ I+ K +I PLP
Sbjct: 58 MVLDALIKIKNETDTTLTFRRSCREGICGSCAMNIDGMNTLACLKPIEEVKKDVRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++ YAQ +S++ PW
Sbjct: 118 HMPVVKDLVPDLSQIYAQLRSVE-----PW 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L I+ K +I PLPHM VVKDLVPD++ YAQ +S++PWL
Sbjct: 94 GMNTLACLKPIEEVKKDVRITPLPHMPVVKDLVPDLSQIYAQLRSVEPWL 143
>gi|315122383|ref|YP_004062872.1| succinate dehydrogenase iron-sulfur subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495785|gb|ADR52384.1| succinate dehydrogenase iron-sulfur subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 259
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 145/231 (62%), Gaps = 50/231 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ + + IYRWNPD D P + Y VDL+ NKID
Sbjct: 26 RLREYRIYRWNPDDQDN-PHIDIYYVDLDDCGPMVLDGLLYIKNKIDPTLTLRRSCREGI 84
Query: 156 -----------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
+ K+YPLPHM V+KDLV DM+ FYAQ++SI+PWL+
Sbjct: 85 CGSCGMNIDGTNTLACIKDMKDIKGIIKVYPLPHMSVIKDLVVDMSYFYAQHRSIEPWLK 144
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ LQS DDR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+L+QAYRW+
Sbjct: 145 TVSPKPAK-ELLQSHDDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWL 203
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+DSRDE DRL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK ++
Sbjct: 204 VDSRDEGQGDRLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMM 254
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 91/159 (57%), Gaps = 29/159 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSC MNI G NTLACI + + K+YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACIKDMKDIKGIIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------- 107
HM V+KDLV DM+ FYAQ++SI+ PW L T++ K + S
Sbjct: 118 HMSVIKDLVVDMSYFYAQHRSIE-----PW--LKTVSPKPAKELLQSHDDRQKIDGLYEC 170
Query: 108 ---AAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
A S++ P+ +Y AI YRW D DE
Sbjct: 171 VMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLVDSRDE 209
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ K+YPLPHM V+KDLV DM+ FYAQ++SI+PWL
Sbjct: 110 IIKVYPLPHMSVIKDLVVDMSYFYAQHRSIEPWL 143
>gi|359409195|ref|ZP_09201663.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[SAR116 cluster alpha proteobacterium HIMB100]
gi|356675948|gb|EHI48301.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[SAR116 cluster alpha proteobacterium HIMB100]
Length = 260
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 148/238 (62%), Gaps = 50/238 (21%)
Query: 115 PAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------- 150
PA AK +TF IYRW+P+ DE P + +++DL++
Sbjct: 19 PASGEAKNTRTFTIYRWSPED-DENPRLDSFEIDLDDCGPMVLDALIKIKNEMDSSLTFR 77
Query: 151 -------------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYK 185
ID + ++ KIYPLPHM VVKDLVPD+ + YAQ
Sbjct: 78 RSCREGICGSCSMNIDGTNTLACLKSIDDVKGDVKIYPLPHMPVVKDLVPDLTHAYAQLT 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
S++PWL+ + + QS ++R+++DGL+EC+LC C+TSCPSYWWNG++YLGPAVL
Sbjct: 138 SVEPWLKSETPAPEGRERKQSPEEREQIDGLWECVLCFSCTTSCPSYWWNGDRYLGPAVL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+QAYRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNPG+AI EIKKL+
Sbjct: 198 LQAYRWIADSRDEYKGERLDALEDPFRLYRCHTIMNCAKTCPKGLNPGKAIGEIKKLM 255
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMD +LTFRRSCREGICGSC+MNI G NTLAC+ ID KIYPLP
Sbjct: 58 MVLDALIKIKNEMDSSLTFRRSCREGICGSCSMNIDGTNTLACLKSIDDVKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ + YAQ S++ PW
Sbjct: 118 HMPVVKDLVPDLTHAYAQLTSVE-----PW 142
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L ID KIYPLPHM VVKDLVPD+ + YAQ S++PWL
Sbjct: 99 ACLKSIDDVKGDVKIYPLPHMPVVKDLVPDLTHAYAQLTSVEPWL 143
>gi|188583478|ref|YP_001926923.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium populi BJ001]
gi|179346976|gb|ACB82388.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium populi BJ001]
Length = 274
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
D +IYPLPHM V+KDLVPD+ NFYAQ+ +I+PWLQ + ++ Q+ +DR +LDG
Sbjct: 123 DGAVRIYPLPHMPVLKDLVPDLTNFYAQHAAIEPWLQTETP-APEKEWKQTPEDRARLDG 181
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACC+TSCPSYWWNG+K+LGPA L+QAYRW+IDSRDE T +RL+ L DPF +YR
Sbjct: 182 LYECILCACCTTSCPSYWWNGDKFLGPAALLQAYRWLIDSRDENTGERLDGLHDPFRLYR 241
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
CHTIMNC TCPK LNP +AIAEIKK++
Sbjct: 242 CHTIMNCANTCPKNLNPAKAIAEIKKMM 269
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 69/105 (65%), Gaps = 20/105 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----------- 49
MVLDAL+ IKN++DPTL FRRSCREGICGSCAMNI G N LAC ID
Sbjct: 58 MVLDALLWIKNKVDPTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKTPDNALPFL 117
Query: 50 ----NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
D +IYPLPHM V+KDLVPD+ NFYAQ+ +I+ PW
Sbjct: 118 TRKDKDGAVRIYPLPHMPVLKDLVPDLTNFYAQHAAIE-----PW 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P + YR D D L +K DP V+R R+C +
Sbjct: 33 YRWNPDDGKNPRI--DTYRVDRDDCGPMVLDALLWIKNKVDPTLVFR--------RSCRE 82
Query: 289 GLNPGRAI-AEIKKLLSGLVKKDKPGLDTAALHKIDANDK--VSKIYPLPHMYVVKDLVP 345
G+ A+ E + L+ + D+ AL + DK +IYPLPHM V+KDLVP
Sbjct: 83 GICGSCAMNIEGQNALACTMGIDECKTPDNALPFLTRKDKDGAVRIYPLPHMPVLKDLVP 142
Query: 346 DMNNFYAQYKSIQPWL 361
D+ NFYAQ+ +I+PWL
Sbjct: 143 DLTNFYAQHAAIEPWL 158
>gi|357144493|ref|XP_003573312.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
2, mitochondrial-like isoform 1 [Brachypodium
distachyon]
Length = 280
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 139/233 (59%), Gaps = 50/233 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
KTF+IYRW+PD P KP +++YKVDL++
Sbjct: 47 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 106
Query: 151 ----------------KIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KI + K S I PLPHM+VVKDLV DM NFY QYKS++PWL+R
Sbjct: 107 SCAMNIDGDNGLACLTKISSESKGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKR 166
Query: 194 -DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D + + Q+ DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI
Sbjct: 167 KDPPSPEGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWI 226
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
DSRD+ T +RL+ + D F +YRCHTI NCT CPKGLNP + I IKKL G
Sbjct: 227 QDSRDQYTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQLG 279
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 72/91 (79%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLDAL+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI + K S I PL
Sbjct: 78 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSESKGASTISPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLV DM NFY QYKS++ PW
Sbjct: 138 PHMFVVKDLVVDMTNFYNQYKSVE-----PW 163
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 317 AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + K S I PLPHM+VVKDLV DM NFY QYKS++PWL R
Sbjct: 119 ACLTKISSESKGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKR 166
>gi|85374186|ref|YP_458248.1| succinate dehydrogenase iron-sulfur subunit [Erythrobacter
litoralis HTCC2594]
gi|84787269|gb|ABC63451.1| succinate dehydrogenase iron-sulfur protein [Erythrobacter
litoralis HTCC2594]
Length = 260
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 143/237 (60%), Gaps = 49/237 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID-------- 153
AE + K F IYR++PD E P +++DL+ N++D
Sbjct: 21 AESGGRVKKFKIYRYDPDS-GENPRYDTFEIDLDQTGPMVLDALFRIKNEVDPTLTFRRS 79
Query: 154 ------------ANDKVS--------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
N K +I PLPHM V+KDLVPD +FYAQY SI
Sbjct: 80 CREGICGSCSMNMNGKNGLACTTAIEDLKGEIRITPLPHMEVIKDLVPDFTHFYAQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS + R+KLDGLYECILCACCST+CPSYWWN +K+LGPA+L+Q
Sbjct: 140 RPWLQTVTPTPSGKERLQSPEQREKLDGLYECILCACCSTACPSYWWNSDKFLGPAILLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
AYRW+ DSRDE T +RL+ L+DPF +YRCHTIMNC CPKGL+P +AIAE KK+++
Sbjct: 200 AYRWLADSRDEMTGERLDDLEDPFRLYRCHTIMNCANVCPKGLSPAKAIAETKKMMA 256
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 88/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL +IKNE+DPTLTFRRSCREGICGSC+MN+ G N LAC + I+ +I PLP
Sbjct: 58 MVLDALFRIKNEVDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDLKGEIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD +FYAQY SI+ PW T T Q
Sbjct: 118 HMEVIKDLVPDFTHFYAQYASIR-----PWLQTVTPTPSGKERLQSPEQREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S+A P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTACPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMEVIKDLVPDFTHFYAQYASIRPWL 143
>gi|53804152|ref|YP_113997.1| succinate dehydrogenase iron-sulfur subunit [Methylococcus
capsulatus str. Bath]
gi|53757913|gb|AAU92204.1| succinate dehydrogenase, iron-sulfur protein [Methylococcus
capsulatus str. Bath]
Length = 260
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 122/151 (80%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D V +I+PLPH V+KDLVPD+ +FYAQY S++PW++ + + LQS +R +
Sbjct: 106 DCGDPV-RIHPLPHQPVIKDLVPDLTHFYAQYASVKPWIEAQTPPPADRERLQSKAERAE 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGL+ECILCACCST+CPSYWWNG+++LGPA L+QAYRWI DSRDE T +RL+ L+DPF
Sbjct: 165 LDGLHECILCACCSTACPSYWWNGDRFLGPAALLQAYRWIADSRDETTGERLDALEDPFK 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
++RCHTIMNCT CPKGLNP RAIAEIKKLL
Sbjct: 225 LFRCHTIMNCTDACPKGLNPARAIAEIKKLL 255
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 7/91 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+D TL FRRSCREG+CGSCAMNI G NTLACI + D D V +I+PL
Sbjct: 58 MVLDALIKIKNEIDSTLAFRRSCREGVCGSCAMNIDGRNTLACIKPLSDCGDPV-RIHPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH V+KDLVPD+ +FYAQY S++ PW
Sbjct: 117 PHQPVIKDLVPDLTHFYAQYASVK-----PW 142
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D D V +I+PLPH V+KDLVPD+ +FYAQY S++PW+
Sbjct: 106 DCGDPV-RIHPLPHQPVIKDLVPDLTHFYAQYASVKPWI 143
>gi|389696105|ref|ZP_10183747.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Microvirga sp. WSM3557]
gi|388584911|gb|EIM25206.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Microvirga sp. WSM3557]
Length = 260
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D KIYPLPHM V+KDLVPD+ +F+AQ+ S++PWLQ + ++ Q+ ++R K
Sbjct: 106 DCGSDSIKIYPLPHMPVLKDLVPDLTSFFAQHASVEPWLQTETP-APETEWRQTPEERSK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACC+TSCPSYWWNG+++LGPA L+QAYRW+IDSRDE T +RL+ L DPF
Sbjct: 165 LDGLYECILCACCTTSCPSYWWNGDRFLGPAALLQAYRWLIDSRDENTGERLDNLHDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLV 307
+YRCHTIMNC TCPKGLNP +AIAE+KK++ V
Sbjct: 225 LYRCHTIMNCANTCPKGLNPAKAIAEVKKMMVARV 259
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 8/92 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
MVLDAL+ IKN +D TL FRRSCREGICGSCAMNI G NTLAC ID +D + KIYP
Sbjct: 58 MVLDALLWIKNNVDSTLVFRRSCREGICGSCAMNIMGGNTLACTLGIDDCGSDSI-KIYP 116
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM V+KDLVPD+ +F+AQ+ S++ PW
Sbjct: 117 LPHMPVLKDLVPDLTSFFAQHASVE-----PW 143
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D KIYPLPHM V+KDLVPD+ +F+AQ+ S++PWL
Sbjct: 106 DCGSDSIKIYPLPHMPVLKDLVPDLTSFFAQHASVEPWL 144
>gi|170746894|ref|YP_001753154.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium radiotolerans JCM 2831]
gi|170653416|gb|ACB22471.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium radiotolerans JCM 2831]
Length = 274
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 142/244 (58%), Gaps = 65/244 (26%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------------- 155
+TF IYRWNPD P + Y+VD + NK+D+
Sbjct: 28 QTFKIYRWNPDD-GANPRIDTYQVDREDCGPMVLDALLWIKNKVDSTLVFRRSCREGICG 86
Query: 156 ------------------------------------DKVSKIYPLPHMYVVKDLVPDMNN 179
D +IYPLPHM V+KDLVPD+ N
Sbjct: 87 SCAMNIEGQNALACTMGIDECKSPDNALPVMTRKDRDGAIRIYPLPHMPVLKDLVPDLTN 146
Query: 180 FYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239
FYAQ+ +I+PWLQ + ++ Q+ +DR +LDGLYECILCACC+TSCPSYWWNG+K+
Sbjct: 147 FYAQHAAIEPWLQTETP-APEKEWRQTPEDRSRLDGLYECILCACCTTSCPSYWWNGDKF 205
Query: 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
LGPA L+QAYRW+IDSRDE T RL+ L DPF +YRCHTIMNC TCPK LNP +AIAEI
Sbjct: 206 LGPAALLQAYRWLIDSRDENTGHRLDGLHDPFRLYRCHTIMNCANTCPKSLNPAKAIAEI 265
Query: 300 KKLL 303
KK++
Sbjct: 266 KKMM 269
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 20/105 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----------- 49
MVLDAL+ IKN++D TL FRRSCREGICGSCAMNI G N LAC ID
Sbjct: 58 MVLDALLWIKNKVDSTLVFRRSCREGICGSCAMNIEGQNALACTMGIDECKSPDNALPVM 117
Query: 50 ----NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
D +IYPLPHM V+KDLVPD+ NFYAQ+ +I+ PW
Sbjct: 118 TRKDRDGAIRIYPLPHMPVLKDLVPDLTNFYAQHAAIE-----PW 157
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 326 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D +IYPLPHM V+KDLVPD+ NFYAQ+ +I+PWL
Sbjct: 123 DGAIRIYPLPHMPVLKDLVPDLTNFYAQHAAIEPWL 158
>gi|319407787|emb|CBI81438.1| SdhB succinate dehydrogenase, iron-sulfur protein [Bartonella sp.
1-1C]
Length = 259
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 144/236 (61%), Gaps = 52/236 (22%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEK-PTMQEYKVD--------------LNNKIDAN------ 155
E F IYRW+PD DEK P + Y VD + N ID
Sbjct: 22 EGATHLTEFHIYRWSPD--DEKNPHLDTYYVDRSLCGPMILDGLLFIKNHIDPTLTLRRS 79
Query: 156 -------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D V K+YPLP M +VKDLVPD+ FYAQ+++I
Sbjct: 80 CREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRAI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+Q
Sbjct: 140 DPWLKTVSPKPAK-EWLQSYSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWIIDSRDE + +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIIDSRDEMSGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
M +VKDLVPD+ FYAQ+++I PW L T++ K + + S
Sbjct: 118 SMPIVKDLVPDLKRFYAQHRAID-----PW--LKTVSPKPAKEWLQS 157
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M +VKDLVPD+ FYAQ+++I PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRAIDPWL 143
>gi|240851317|ref|YP_002972720.1| succinate dehydrogenase, iron-sulfur protein [Bartonella grahamii
as4aup]
gi|240268440|gb|ACS52028.1| succinate dehydrogenase, iron-sulfur protein [Bartonella grahamii
as4aup]
Length = 259
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 141/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E K F +YRW+PD + P + Y VD + N ID
Sbjct: 22 EGATKLTEFHVYRWSPDD-ENNPRLDTYYVDRSACGPMILDGLLFIKNHIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M VVKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPAVL+QA
Sbjct: 141 PWLQTVSPEPAK-EWLQSHSDRQKIDGLYECILCACCQTSCPSYWWNGDRYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M VVKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPVVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M VVKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPVVKDLVPDLKRFYAQHRVIEPWL 143
>gi|356571453|ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
2, mitochondrial-like [Glycine max]
Length = 277
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 142/251 (56%), Gaps = 50/251 (19%)
Query: 101 IRSFQLSAAASSAVP-AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------- 149
+R+ A A P A KTF IYRW+P+ P KP +++Y+++L
Sbjct: 24 LRAHASEAQAQQVEPKARGTPTLKTFQIYRWSPENPS-KPELKDYQINLKECGPMVLDAL 82
Query: 150 --------------------------------------NKIDANDKVSKIYPLPHMYVVK 171
KI + + I PLPHM+V+K
Sbjct: 83 IKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEGAATTITPLPHMFVIK 142
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPS 231
DLV DM NFY QYKSI+PWL+R + LQS +R+KLDG+YECILCACCSTSCPS
Sbjct: 143 DLVVDMTNFYNQYKSIEPWLKRKNPPEPGKEILQSKKEREKLDGMYECILCACCSTSCPS 202
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291
YWWN E YLGPA L+ A RWI DSRDE T +RL+ + D F +YRCHTI+NC R CPKGLN
Sbjct: 203 YWWNPESYLGPAALLHANRWISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKGLN 262
Query: 292 PGRAIAEIKKL 302
PG+ I+ IK L
Sbjct: 263 PGKQISHIKSL 273
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNI G N LAC++KI + + I PLP
Sbjct: 77 MVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEGAATTITPLP 136
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 137 HMFVIKDLVVDMTNFYNQYKSIE-----PW 161
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 118 ACLTKIPSEGAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 164
>gi|384487867|gb|EIE80047.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit [Rhizopus
delemar RA 99-880]
Length = 1754
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 144/234 (61%), Gaps = 60/234 (25%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN--------------- 155
A+ NPDKP EKP +Q YKVDLN N+ DA
Sbjct: 1525 IALSANNPDKPLEKPVLQTYKVDLNACGPMVLDALIKIKNEEDATLTFRRSCREGICGSC 1584
Query: 156 --------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-- 193
K KIYPLPHM +VKDLVPD+ +FY QYKSI+P+L++
Sbjct: 1585 AMNIGGINTLACIARIDPDTSKSLKIYPLPHMNIVKDLVPDLTHFYKQYKSIEPYLKQKS 1644
Query: 194 ---DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
+KEN LQ+++DR KLDGLYECILCACCS SCPSYWWN E+YLGPAVLMQ+YR
Sbjct: 1645 PPPEKEN------LQTIEDRSKLDGLYECILCACCSASCPSYWWNQEEYLGPAVLMQSYR 1698
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
W++DSRD+ +R +L+D S+YRCHTI+NC++TCPKGL P +AI IK +++
Sbjct: 1699 WMVDSRDDFGPERRERLQDKMSLYRCHTILNCSKTCPKGLQPAKAIQRIKMMMA 1752
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNE D TLTFRRSCREGICGSCAMNIGG+NTLACI++ID + S KIYPL
Sbjct: 1554 MVLDALIKIKNEEDATLTFRRSCREGICGSCAMNIGGINTLACIARIDPDTSKSLKIYPL 1613
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM +VKDLVPD+ +FY QYKSI+ +L
Sbjct: 1614 PHMNIVKDLVPDLTHFYKQYKSIEPYL 1640
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A + +ID + S KIYPLPHM +VKDLVPD+ +FY QYKSI+P+L
Sbjct: 1590 GINTLACIARIDPDTSKSLKIYPLPHMNIVKDLVPDLTHFYKQYKSIEPYL 1640
>gi|393771511|ref|ZP_10359982.1| succinate dehydrogenase iron-sulfur protein [Novosphingobium sp. Rr
2-17]
gi|392722998|gb|EIZ80392.1| succinate dehydrogenase iron-sulfur protein [Novosphingobium sp. Rr
2-17]
Length = 261
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 116/143 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+I PLP M V+KDLVPD +FYAQY SI+PWLQ + LQS + R+KLDGLYEC
Sbjct: 113 RITPLPSMDVIKDLVPDFTHFYAQYASIRPWLQTVSTTPSGKERLQSPEQREKLDGLYEC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKL 302
MNC CPKGL+P RAIAEIKK+
Sbjct: 233 MNCANVCPKGLSPARAIAEIKKM 255
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 87/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+IKIKNEMD TLTFRRSCREGICGSC+MN+ G N LAC + I+ +I PLP
Sbjct: 59 MVLDAIIKIKNEMDSTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDLKGDIRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
M V+KDLVPD +FYAQY SI+ PW + T Q
Sbjct: 119 SMDVIKDLVPDFTHFYAQYASIR-----PWLQTVSTTPSGKERLQSPEQREKLDGLYECI 173
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ K+ AI YRW D DE
Sbjct: 174 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDE 211
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLP M V+KDLVPD +FYAQY SI+PWL
Sbjct: 113 RITPLPSMDVIKDLVPDFTHFYAQYASIRPWL 144
>gi|103413|pir||C32394 succinate dehydrogenase (ubiquinone) (EC 1.3.5.1) 27K iron-sulfur
protein - fruit fly (Drosophila melanogaster)
(fragment)
Length = 142
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/134 (75%), Positives = 123/134 (91%), Gaps = 2/134 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYL+S++
Sbjct: 9 EIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLESIE 68
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 69 EREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 128
Query: 269 DPFSVYRCHTIMNC 282
DPFS+YRCHTIMNC
Sbjct: 129 DPFSLYRCHTIMNC 142
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 1 GGNTLASPEIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 52
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 24/110 (21%)
Query: 37 GVNTLACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL-------GG 88
G NTLA +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+ +L G
Sbjct: 1 GGNTLAS-PEIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEG 59
Query: 89 PWKILGTLTAK----NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
+ L ++ + + L A S++ P+ Y WN DK
Sbjct: 60 KQQYLESIEEREKLDGLYECILCACCSTSCPS-----------YWWNGDK 98
>gi|399216585|emb|CCF73272.1| unnamed protein product [Babesia microti strain RI]
Length = 286
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 151/255 (59%), Gaps = 49/255 (19%)
Query: 124 TFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------------- 150
TF+I+R+N + +++PTMQ Y++D NN
Sbjct: 29 TFSIFRYNSET-NQRPTMQNYELDTNNCGPMVLDALIKIKNEQDSTLSFRRSCREGICGS 87
Query: 151 ---------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
ID N +V ++ PLP++YV++DLVPD++NFYAQY SIQPWL+
Sbjct: 88 CSMNIDGKNGLACLTPIDTNKEVIEVQPLPNLYVIRDLVPDLSNFYAQYVSIQPWLRTKS 147
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+ G + LQS DDR KLDG+YECILCACCSTSCPSYWWN + +LGPA+LMQAYRWI DS
Sbjct: 148 KQEGKRENLQSPDDRAKLDGMYECILCACCSTSCPSYWWNPDHFLGPAILMQAYRWIQDS 207
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLD 315
RD+ T +RL Q+ D +YRCH I+NC+ CPKGL+P +AI E+K + G
Sbjct: 208 RDQYTKERLVQMNDSMKLYRCHGILNCSSCCPKGLDPAKAIKELKAKVEGEFTDPDDWAQ 267
Query: 316 TAALHKIDANDKVSK 330
+A ++ N ++ K
Sbjct: 268 VSANEYMEKNSRLLK 282
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 92/143 (64%), Gaps = 21/143 (14%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE D TL+FRRSCREGICGSC+MNI G N LAC++ ID N +V ++ PLP
Sbjct: 58 MVLDALIKIKNEQDSTLSFRRSCREGICGSCSMNIDGKNGLACLTPIDTNKEVIEVQPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILG---TLTAKNIRS-------FQLSAAA 110
++YV++DLVPD++NFYAQY SIQ L K G L + + R+ L A
Sbjct: 118 NLYVIRDLVPDLSNFYAQYVSIQPWLRTKSKQEGKRENLQSPDDRAKLDGMYECILCACC 177
Query: 111 SSAVPAEKPAKYKTFAIYRWNPD 133
S++ P+ Y WNPD
Sbjct: 178 STSCPS-----------YWWNPD 189
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 311 KPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K GL A L ID N +V ++ PLP++YV++DLVPD++NFYAQY SIQPWL
Sbjct: 95 KNGL--ACLTPIDTNKEVIEVQPLPNLYVIRDLVPDLSNFYAQYVSIQPWL 143
>gi|395791759|ref|ZP_10471215.1| succinate dehydrogenase iron-sulfur subunit [Bartonella alsatica
IBS 382]
gi|395408062|gb|EJF74682.1| succinate dehydrogenase iron-sulfur subunit [Bartonella alsatica
IBS 382]
Length = 259
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 142/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F +YRW+PD +E P + Y +D + N ID
Sbjct: 22 EGATQLTEFHVYRWSPDD-EENPHLDTYYIDRSACGPMILDGLLFIKNHIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D V K+YPLP M +VKDLVPD+ FYAQ++ I+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRVIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++LQS DR+K+DGLYECILCACC TSCPSYWWNG++YLGPA+L+QA
Sbjct: 141 PWLQTISPEPAK-EWLQSYSDRRKIDGLYECILCACCQTSCPSYWWNGDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWI DSRDE +RL+ L+DPF +YRCHTIMNC +TCPKGLNP +AIAEIKKL+
Sbjct: 200 YRWIADSRDEMCGERLDNLEDPFRLYRCHTIMNCAQTCPKGLNPAKAIAEIKKLM 254
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L+ IKN +DPTLTFRRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MILDGLLFIKNHIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDDVKHPIKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
M +VKDLVPD+ FYAQ++ I+ PW
Sbjct: 118 SMPIVKDLVPDLKRFYAQHRVIE-----PW 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D K+YPLP M +VKDLVPD+ FYAQ++ I+PWL
Sbjct: 94 GTNTLACTKGMDDVKHPIKVYPLPSMPIVKDLVPDLKRFYAQHRVIEPWL 143
>gi|260576584|ref|ZP_05844572.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodobacter sp. SW2]
gi|259021188|gb|EEW24496.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodobacter sp. SW2]
Length = 258
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 144/233 (61%), Gaps = 50/233 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ F IYRWNPD + P++ Y VD++
Sbjct: 27 RKFQIYRWNPDD-GQNPSIDTYFVDMDKCGPMVLDALIKIKDEIDPTLTFRRSCREGICG 85
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID ++++ KIYPLPHM VVKDL+PD+ +FYAQ+ +I PWL+
Sbjct: 86 SCAMNIDGMNRLACIFGLDEVKGDVKIYPLPHMAVVKDLIPDLTHFYAQHAAIMPWLE-T 144
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
K ++ QS++DR KLDGLYEC++CA CS SCPSYWWN +KYLGPA L+ AYRW+ID
Sbjct: 145 KTARPAKEWRQSIEDRAKLDGLYECVMCASCSASCPSYWWNSDKYLGPAALLHAYRWVID 204
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLV 307
SRDE T +RL+ L+DPF VYRCH I+NCT+TCPKGLNP +AIAE+KK+L V
Sbjct: 205 SRDEATPERLDALEDPFRVYRCHAILNCTQTCPKGLNPAKAIAELKKMLIARV 257
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E+DPTLTFRRSCREGICGSCAMNI G+N LACI +D KIYPLP
Sbjct: 57 MVLDALIKIKDEIDPTLTFRRSCREGICGSCAMNIDGMNRLACIFGLDEVKGDVKIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ +I PW L T TA+ + ++ S
Sbjct: 117 HMAVVKDLIPDLTHFYAQHAAIM-----PW--LETKTARPAKEWRQS 156
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + +D KIYPLPHM VVKDL+PD+ +FYAQ+ +I PWL
Sbjct: 98 ACIFGLDEVKGDVKIYPLPHMAVVKDLIPDLTHFYAQHAAIMPWL 142
>gi|145353844|ref|XP_001421210.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581447|gb|ABO99503.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 256
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 145/232 (62%), Gaps = 51/232 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ F +YRW+PD DE P + Y VD N+
Sbjct: 26 QQFRVYRWDPDSGDE-PKYKTYDVDTNDCGPMMLDVLFKIKDEQDQTLSFRRSCREGICG 84
Query: 151 ----------------KIDANDKVSK-IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
K++ +K ++ I PLPHM+VV+DLV DM NFYAQYKSI+P+L+
Sbjct: 85 SCAMNINGRNGLACLTKVEKTEKGAQTIAPLPHMFVVRDLVVDMANFYAQYKSIEPFLKT 144
Query: 194 DKENIGN-AQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ N A+ LQ+ +DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVL+QAYRWI
Sbjct: 145 KSDAPANGAERLQTKEDRAKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLQAYRWI 204
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
IDSRDE T +RL + D F +YRCHTIMNC++ CPKGLNP IA+IK++++
Sbjct: 205 IDSRDEFTEERLANVNDAFKLYRCHTIMNCSKVCPKGLNPALKIAKIKQMVA 256
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 93/155 (60%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK-IYPL 59
M+LD L KIK+E D TL+FRRSCREGICGSCAMNI G N LAC++K++ +K ++ I PL
Sbjct: 56 MMLDVLFKIKDEQDQTLSFRRSCREGICGSCAMNINGRNGLACLTKVEKTEKGAQTIAPL 115
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL----GGPWKILGTLTAKNIRS-------FQLSA 108
PHM+VV+DLV DM NFYAQYKSI+ L P L K R+ L A
Sbjct: 116 PHMFVVRDLVVDMANFYAQYKSIEPFLKTKSDAPANGAERLQTKEDRAKLDGLYECILCA 175
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY A+ YRW D DE
Sbjct: 176 CCSTSCPSYWWNSDKYLGPAVLLQAYRWIIDSRDE 210
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDANDKVSK-IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L K++ +K ++ I PLPHM+VV+DLV DM NFYAQYKSI+P+L
Sbjct: 97 ACLTKVEKTEKGAQTIAPLPHMFVVRDLVVDMANFYAQYKSIEPFL 142
>gi|407976715|ref|ZP_11157612.1| succinate dehydrogenase iron-sulfur subunit [Nitratireductor
indicus C115]
gi|407427842|gb|EKF40529.1| succinate dehydrogenase iron-sulfur subunit [Nitratireductor
indicus C115]
Length = 260
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 144/236 (61%), Gaps = 51/236 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD E P + Y VD++ NKID
Sbjct: 22 EGAKNLREYKIYRWSPDD-GENPRVDTYYVDMDDCGPMVLDGLIYIKNKIDPTLTFRRSC 80
Query: 156 ------------------------DKVS----KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D+V+ KIYPLPHM VVKDLVPD++ YAQ SI
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDEVTQDTVKIYPLPHMPVVKDLVPDLSVPYAQLSSI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ ++ QS +DR KLDGLYECILC CC TSCPSYWWNGE+YLGPAVL+Q
Sbjct: 141 EPWLQTVTPEPA-TEWKQSHEDRVKLDGLYECILCFCCQTSCPSYWWNGERYLGPAVLLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRW+IDSRDE T +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIA IKK++
Sbjct: 200 AYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCTQACPKGLNPAKAIANIKKMM 255
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC +D KIYPL
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEVTQDTVKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PHM VVKDLVPD++ YAQ SI+ PW L T+T + ++ S
Sbjct: 118 PHMPVVKDLVPDLSVPYAQLSSIE-----PW--LQTVTPEPATEWKQS 158
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K + KIYPLPHM VVKDLVPD++ YAQ SI+PWL
Sbjct: 94 GTNTLACTKGMDEVTQDTVKIYPLPHMPVVKDLVPDLSVPYAQLSSIEPWL 144
>gi|398384543|ref|ZP_10542573.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sphingobium sp. AP49]
gi|397722702|gb|EJK83238.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sphingobium sp. AP49]
Length = 262
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/147 (67%), Positives = 117/147 (79%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K +I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS DR+KLDGL
Sbjct: 111 KEVQITPLPHMDVIKDLVPDFTHFYAQYNSIKPWLQTVSPAPSGKERLQSPADREKLDGL 170
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T DRL+ L+DPF +YRC
Sbjct: 171 YECILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEFTGDRLDDLEDPFRLYRC 230
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC CPKGL+P +AIAE KK++
Sbjct: 231 HTIMNCANVCPKGLSPAKAIAETKKMM 257
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSC+MN+ G N LAC + ID K +I PL
Sbjct: 59 MVLDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGRNGLACTTAIDECAGKEVQITPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD +FYAQY SI+ PW
Sbjct: 119 PHMDVIKDLVPDFTHFYAQYNSIK-----PW 144
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K +I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 111 KEVQITPLPHMDVIKDLVPDFTHFYAQYNSIKPWL 145
>gi|381201254|ref|ZP_09908383.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium yanoikuyae
XLDN2-5]
gi|427410865|ref|ZP_18901067.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium yanoikuyae
ATCC 51230]
gi|425710853|gb|EKU73873.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium yanoikuyae
ATCC 51230]
Length = 262
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 118/147 (80%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K +I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS DR+KLDGL
Sbjct: 111 KQVQITPLPHMDVIKDLVPDFTHFYAQYNSIKPWLQTVSPAPSGKERLQSPADREKLDGL 170
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRC
Sbjct: 171 YECILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEFTGERLDELEDPFRLYRC 230
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC CPKGL+P +AIAE KK++
Sbjct: 231 HTIMNCANVCPKGLSPAKAIAETKKMM 257
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDAL+KIKNE D TLTFRRSCREGICGSC+MN+ G N LAC + ID K +I PL
Sbjct: 59 MVLDALLKIKNEYDSTLTFRRSCREGICGSCSMNMNGKNGLACTTAIDECAGKQVQITPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD +FYAQY SI+ PW
Sbjct: 119 PHMDVIKDLVPDFTHFYAQYNSIK-----PW 144
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K +I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 111 KQVQITPLPHMDVIKDLVPDFTHFYAQYNSIKPWL 145
>gi|399088535|ref|ZP_10753570.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Caulobacter sp. AP07]
gi|398030671|gb|EJL24077.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Caulobacter sp. AP07]
Length = 260
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
Query: 149 NNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLD 208
+ D K +I PLP VVKDL+PD+ FYAQY SI+PWL A++ QS +
Sbjct: 102 HGHADTPGKAVQISPLPSQPVVKDLIPDLTLFYAQYASIEPWLHTVTPE-PQAEWRQSPE 160
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECILCACCSTSCPSYWWNG+KYLGPA L+ AYRW+IDSRDE T DRL+ L+
Sbjct: 161 DRAKLDGLYECILCACCSTSCPSYWWNGDKYLGPATLLHAYRWLIDSRDEATGDRLDDLE 220
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DPF +YRCHTIMNC + CPKGLNP +AIAEIKK+L
Sbjct: 221 DPFKLYRCHTIMNCAQVCPKGLNPAKAIAEIKKML 255
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 69/98 (70%), Gaps = 8/98 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACI-SKIDANDKVSKIYPL 59
MVLDAL+ IKN +DPTL FRRSCREG+CGSCAMNIGG NTLAC D K +I PL
Sbjct: 58 MVLDALLYIKNSIDPTLAFRRSCREGVCGSCAMNIGGRNTLACTHGHADTPGKAVQISPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
P VVKDL+PD+ FYAQY SI+ PW L T+T
Sbjct: 118 PSQPVVKDLIPDLTLFYAQYASIE-----PW--LHTVT 148
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D K +I PLP VVKDL+PD+ FYAQY SI+PWL
Sbjct: 106 DTPGKAVQISPLPSQPVVKDLIPDLTLFYAQYASIEPWL 144
>gi|294012423|ref|YP_003545883.1| succinate dehydrogenase iron-sulfur protein [Sphingobium japonicum
UT26S]
gi|390166679|ref|ZP_10218937.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium indicum
B90A]
gi|292675753|dbj|BAI97271.1| succinate dehydrogenase iron-sulfur protein [Sphingobium japonicum
UT26S]
gi|389590465|gb|EIM68455.1| succinate dehydrogenase iron-sulfur subunit [Sphingobium indicum
B90A]
Length = 262
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 118/147 (80%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K ++ PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS DR+KLDGL
Sbjct: 111 KEVRVTPLPHMDVIKDLVPDFTHFYAQYNSIKPWLQTVSPAPSGKERLQSPADREKLDGL 170
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRC
Sbjct: 171 YECILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGERLDELEDPFRLYRC 230
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC CPKGL+P +AIAE KK++
Sbjct: 231 HTIMNCANVCPKGLSPAKAIAETKKMM 257
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSC+MN+ G N LAC + I + K ++ PL
Sbjct: 59 MVLDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGRNGLACTTSIEECAGKEVRVTPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD +FYAQY SI+ PW
Sbjct: 119 PHMDVIKDLVPDFTHFYAQYNSIK-----PW 144
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K ++ PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 111 KEVRVTPLPHMDVIKDLVPDFTHFYAQYNSIKPWL 145
>gi|334345000|ref|YP_004553552.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sphingobium chlorophenolicum L-1]
gi|334101622|gb|AEG49046.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Sphingobium chlorophenolicum L-1]
Length = 262
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 118/147 (80%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K ++ PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS DR+KLDGL
Sbjct: 111 KEVRVTPLPHMDVIKDLVPDFTHFYAQYNSIKPWLQTVSPAPSGKERLQSPADREKLDGL 170
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRC
Sbjct: 171 YECILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGERLDELEDPFRLYRC 230
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC CPKGL+P +AIAE KK++
Sbjct: 231 HTIMNCANVCPKGLSPAKAIAETKKMM 257
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSC+MN+ G N LAC + I + K ++ PL
Sbjct: 59 MVLDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGRNGLACTTSIEECAGKEVRVTPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD +FYAQY SI+ PW
Sbjct: 119 PHMDVIKDLVPDFTHFYAQYNSIK-----PW 144
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K ++ PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 111 KEVRVTPLPHMDVIKDLVPDFTHFYAQYNSIKPWL 145
>gi|88606897|ref|YP_504783.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma
phagocytophilum HZ]
gi|88607770|ref|YP_504786.1| succinate dehydrogenase iron-sulfur subunit [Anaplasma
phagocytophilum HZ]
gi|47060300|gb|AAT09766.1| succinate dehydrogenase subunit B [Anaplasma phagocytophilum]
gi|88597960|gb|ABD43430.1| succinate dehydrogenase, iron-sulfur protein [Anaplasma
phagocytophilum HZ]
gi|88598833|gb|ABD44303.1| succinate dehydrogenase, iron-sulfur protein [Anaplasma
phagocytophilum HZ]
Length = 262
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 142/236 (60%), Gaps = 49/236 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
E + F IYRW+PD E P + Y +DL+
Sbjct: 22 TEGAKRTGCFKIYRWSPDD-GENPRIDTYYIDLDKCGQMVLDALIKVKNEYDSTLTFRRS 80
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ KI+PLPHM V+KDLVPD++NFY QYKSI
Sbjct: 81 CREGICGSCAMNIDGTNTLACTKYISDIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
PWL+ D ++LQS++DR KLD +Y+CILCACCSTSCPSYWWN +KYLGPA L+Q
Sbjct: 141 SPWLKSDGARSDREEHLQSIEDRSKLDKVYDCILCACCSTSCPSYWWNPDKYLGPAALLQ 200
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW++DSRD T +RL L+D F +YRCHTIMNCT+TCPK LNP +AIA+IK+++
Sbjct: 201 VYRWLVDSRDTATEERLAFLEDAFKLYRCHTIMNCTKTCPKDLNPAKAIAKIKQMM 256
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 90/149 (60%), Gaps = 31/149 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+KNE D TLTFRRSCREGICGSCAMNI G NTLAC I KI+PLP
Sbjct: 59 MVLDALIKVKNEYDSTLTFRRSCREGICGSCAMNIDGTNTLACTKYISDIKGDVKIFPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLT--AKNIRSFQ------------ 105
HM V+KDLVPD++NFY QYKSI PW K G + ++++S +
Sbjct: 119 HMDVIKDLVPDLSNFYKQYKSI-----SPWLKSDGARSDREEHLQSIEDRSKLDKVYDCI 173
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WNPDK
Sbjct: 174 LCACCSTSCPS-----------YWWNPDK 191
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K KI+PLPHM V+KDLVPD++NFY QYKSI PWL
Sbjct: 95 GTNTLACTKYISDIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWL 144
>gi|220926982|ref|YP_002502284.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium nodulans ORS 2060]
gi|219951589|gb|ACL61981.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium nodulans ORS 2060]
Length = 260
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 97/151 (64%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D KIYPLPHM V+KDLVPD+++F+AQ+ +I+PWLQ + ++ Q+ +DR +
Sbjct: 106 DCKSSQIKIYPLPHMPVLKDLVPDLSSFFAQHAAIEPWLQTETP-APEKEWRQTPEDRAR 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACC+TSCPSYWWNG+++LGPA L+QAYRW+IDSRDE T +RL+ L DPF
Sbjct: 165 LDGLYECILCACCTTSCPSYWWNGDRFLGPAALLQAYRWLIDSRDEHTGERLDILHDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC TCPKGLNP +AIAEIKK++
Sbjct: 225 LYRCHTIMNCANTCPKGLNPAKAIAEIKKMM 255
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDAL+ IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC I D KIYPL
Sbjct: 58 MVLDALLWIKNKVDPTLTFRRSCREGICGSCAMNIMGQNTLACTLGIDDCKSSQIKIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+++F+AQ+ +I+ PW
Sbjct: 118 PHMPVLKDLVPDLSSFFAQHAAIE-----PW 143
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D KIYPLPHM V+KDLVPD+++F+AQ+ +I+PWL
Sbjct: 106 DCKSSQIKIYPLPHMPVLKDLVPDLSSFFAQHAAIEPWL 144
>gi|296283814|ref|ZP_06861812.1| succinate dehydrogenase iron-sulfur subunit [Citromicrobium
bathyomarinum JL354]
Length = 261
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/237 (46%), Positives = 140/237 (59%), Gaps = 49/237 (20%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK- 160
AE + K F IYR+NPD P ++VDL+ N+ID +
Sbjct: 22 AEGAGRVKKFKIYRYNPDS-GSNPHYDRFEVDLDACGPMVLDALFKIKNEIDPTLTFRRS 80
Query: 161 ---------------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSI 187
I PLPHM VVKDLVPD +FYAQY SI
Sbjct: 81 CREGICGSCAMNINGSNALACTTAIEDLKGDIRITPLPHMEVVKDLVPDFTHFYAQYASI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ + LQS + R++LDGLYECILCACCST+CPSYWWN +K+LGPA+L+Q
Sbjct: 141 RPWLQTVTPTPSGEERLQSPEQREQLDGLYECILCACCSTACPSYWWNSDKFLGPAILLQ 200
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
AYRW+ DSRDE T +RL+ L+DP+ +YRCHTIMNC CPKGL+P +AIAE KK+++
Sbjct: 201 AYRWLADSRDEMTGERLDALEDPYRLYRCHTIMNCANVCPKGLSPAKAIAETKKMMA 257
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 88/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC + I+ +I PLP
Sbjct: 59 MVLDALFKIKNEIDPTLTFRRSCREGICGSCAMNINGSNALACTTAIEDLKGDIRITPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPD +FYAQY SI+ PW T T Q
Sbjct: 119 HMEVVKDLVPDFTHFYAQYASIR-----PWLQTVTPTPSGEERLQSPEQREQLDGLYECI 173
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S+A P+ K+ AI YRW D DE
Sbjct: 174 LCACCSTACPSYWWNSDKFLGPAILLQAYRWLADSRDE 211
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM VVKDLVPD +FYAQY SI+PWL
Sbjct: 113 RITPLPHMEVVKDLVPDFTHFYAQYASIRPWL 144
>gi|156103075|ref|XP_001617230.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium vivax
Sal-1]
gi|148806104|gb|EDL47503.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Plasmodium vivax]
Length = 340
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 150/238 (63%), Gaps = 51/238 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------KIDAN------------- 155
K F+I+R+NP + +++P M+ ++VD++N +ID+
Sbjct: 87 KKFSIFRYNP-QNNKRPKMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGICG 145
Query: 156 ----------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+V++I+PLP++Y++KDLVPD+ NFY QYKSI PWL+R
Sbjct: 146 SCAMNINGKNGLACLTEVNKDKKEVTEIHPLPNLYIIKDLVPDLTNFYNQYKSIDPWLKR 205
Query: 194 D-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
K+ G ++ QS++DRKKLDGLYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI
Sbjct: 206 KTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWI 265
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
+DSRDE T +RL ++ D +YRCH IMNCT CPKGL+P +AI +K+L+ K+
Sbjct: 266 VDSRDEYTKERLMEVNDTMKLYRCHGIMNCTLCCPKGLDPAKAIRNMKELVQEKFSKE 323
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 6/108 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K V++I+PL
Sbjct: 117 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKDKKEVTEIHPL 176
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
P++Y++KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 177 PNLYIIKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQS 219
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
M+ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 104 METFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 153
Query: 306 LVKKDKPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K V++I+PLP++Y++KDLVPD+ NFY QYKSI PWL R
Sbjct: 154 -----KNGL--ACLTEVNKDKKEVTEIHPLPNLYIIKDLVPDLTNFYNQYKSIDPWLKR 205
>gi|103487715|ref|YP_617276.1| succinate dehydrogenase iron-sulfur subunit [Sphingopyxis
alaskensis RB2256]
gi|98977792|gb|ABF53943.1| succinate dehydrogenase subunit B [Sphingopyxis alaskensis RB2256]
Length = 260
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 115/142 (80%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP M V+KDLVPD +FYAQY SI+PWL+ + LQS +R+KLDGLYECI
Sbjct: 113 ITPLPAMDVIKDLVPDFTHFYAQYASIEPWLKTKTTTPSGKERLQSPAEREKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKL 302
NC CPKGL+P RAIAEIKKL
Sbjct: 233 NCANACPKGLSPARAIAEIKKL 254
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 85/158 (53%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K+E D TLTFRRSCREGICGSC+MN+ G N LAC + I+ I PLP
Sbjct: 58 MVLDALIKMKSEQDSTLTFRRSCREGICGSCSMNMNGKNGLACTTAIEDLKGDITITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
M V+KDLVPD +FYAQY SI+ PW T T Q
Sbjct: 118 AMDVIKDLVPDFTHFYAQYASIE-----PWLKTKTTTPSGKERLQSPAEREKLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S++ P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP M V+KDLVPD +FYAQY SI+PWL
Sbjct: 113 ITPLPAMDVIKDLVPDFTHFYAQYASIEPWL 143
>gi|119383324|ref|YP_914380.1| succinate dehydrogenase iron-sulfur subunit [Paracoccus
denitrificans PD1222]
gi|2494620|sp|Q59662.1|DHSB_PARDE RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|975319|gb|AAA75178.1| succinate dehydrogenase iron-sulfur protein subunit [Paracoccus
denitrificans]
gi|119373091|gb|ABL68684.1| succinate dehydrogenase subunit B [Paracoccus denitrificans PD1222]
Length = 259
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 145/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + F IYRW+PD E P + Y VD++ N+ID
Sbjct: 22 EGATNVRRFNIYRWDPDT-GENPRIDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D++ IYPLPHM VVKDLVPD+ +FYAQ+ S+Q
Sbjct: 81 REGICGSCAMNIDGGNHLACIYGMDEIKGDVNIYPLPHMPVVKDLVPDLTHFYAQHASVQ 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+L + + ++ QS++DRKKLDGLYEC++CA CST+CPSYWWNG++YLGPA L+ A
Sbjct: 141 PYLITETPT-PDKEWRQSIEDRKKLDGLYECVMCASCSTACPSYWWNGDRYLGPAALLHA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRWIIDSRDE T +RL+ L+DPF +YRCHTIMNCT TCPKGLNP +AIA IK ++
Sbjct: 200 YRWIIDSRDEATGERLDSLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHMM 254
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 70/86 (81%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LACI +D IYPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGMDEIKGDVNIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ +FYAQ+ S+Q +L
Sbjct: 118 HMPVVKDLVPDLTHFYAQHASVQPYL 143
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A ++ +D IYPLPHM VVKDLVPD+ +FYAQ+ S+QP+L
Sbjct: 95 GNHLACIYGMDEIKGDVNIYPLPHMPVVKDLVPDLTHFYAQHASVQPYL 143
>gi|154245907|ref|YP_001416865.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Xanthobacter autotrophicus Py2]
gi|154159992|gb|ABS67208.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Xanthobacter autotrophicus Py2]
Length = 261
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLY 217
V IYPLPHM VVKDLVPD+ +FYAQ+ SI+PWLQ D ++ Q+ DDR+KLDGLY
Sbjct: 112 VVNIYPLPHMPVVKDLVPDLTHFYAQHASIEPWLQTDSPP-PEKEWRQAKDDREKLDGLY 170
Query: 218 ECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCH 277
ECILCACCSTSCPSYWWNG++YLGPA L+QA RW+ DSRDE+T RL+ L+DPF +YRCH
Sbjct: 171 ECILCACCSTSCPSYWWNGDRYLGPAALLQATRWLKDSRDERTGARLDYLEDPFRLYRCH 230
Query: 278 TIMNCTRTCPKGLNPGRAIAEIKKLL 303
TIMNC + CPK LNP +AIAEIKK++
Sbjct: 231 TIMNCAQACPKSLNPAKAIAEIKKMM 256
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNIGG NTLAC +D V IYP
Sbjct: 58 MVLDGLIWIKNTVDPTLTFRRSCREGVCGSCAMNIGGTNTLACTKGMDEVLVKGVVNIYP 117
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM VVKDLVPD+ +FYAQ+ SI+ PW
Sbjct: 118 LPHMPVVKDLVPDLTHFYAQHASIE-----PW 144
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V IYPLPHM VVKDLVPD+ +FYAQ+ SI+PWL
Sbjct: 112 VVNIYPLPHMPVVKDLVPDLTHFYAQHASIEPWL 145
>gi|341615257|ref|ZP_08702126.1| succinate dehydrogenase iron-sulfur subunit [Citromicrobium sp.
JLT1363]
Length = 260
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 140/233 (60%), Gaps = 49/233 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK----- 160
+ K F IYR+NPD E P +++DL+ N+ID +
Sbjct: 25 GRIKKFKIYRYNPDS-GENPHYDRFELDLDACGPMVLDALFKIKNEIDPTLTFRRSCREG 83
Query: 161 -----------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
I PLPHM VVKDLVPD +FYAQY SI+PWL
Sbjct: 84 ICGSCAMNINGSNALACTTAIEDLGGEIRITPLPHMEVVKDLVPDFTHFYAQYASIRPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q + LQS ++R+ LDGLYECILCACCST+CPSYWWN +K+LGPA+L+QAYRW
Sbjct: 144 QTVTPTPSGKERLQSPEERENLDGLYECILCACCSTACPSYWWNSDKFLGPAILLQAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+ DSRDE T +RL+QL+DP+ +YRCHTIMNC CPKGL+P +AIAE KK+++
Sbjct: 204 LADSRDEMTGERLDQLEDPYRLYRCHTIMNCANVCPKGLSPAKAIAETKKMIA 256
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 88/158 (55%), Gaps = 26/158 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC + I+ +I PLP
Sbjct: 58 MVLDALFKIKNEIDPTLTFRRSCREGICGSCAMNINGSNALACTTAIEDLGGEIRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM VVKDLVPD +FYAQY SI+ PW T T Q
Sbjct: 118 HMEVVKDLVPDFTHFYAQYASIR-----PWLQTVTPTPSGKERLQSPEERENLDGLYECI 172
Query: 106 LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
L A S+A P+ K+ AI YRW D DE
Sbjct: 173 LCACCSTACPSYWWNSDKFLGPAILLQAYRWLADSRDE 210
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+I PLPHM VVKDLVPD +FYAQY SI+PWL
Sbjct: 112 RITPLPHMEVVKDLVPDFTHFYAQYASIRPWL 143
>gi|94496919|ref|ZP_01303493.1| succinate dehydrogenase iron-sulfur protein [Sphingomonas sp.
SKA58]
gi|94423595|gb|EAT08622.1| succinate dehydrogenase iron-sulfur protein [Sphingomonas sp.
SKA58]
Length = 262
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 118/147 (80%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K +I PLPHM V+KDLVPD +FYAQY SI+PWLQ + LQS DR+KLDGL
Sbjct: 111 KQVQITPLPHMDVIKDLVPDFTHFYAQYNSIKPWLQTVSPPPSGKERLQSPADREKLDGL 170
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN +K+LGPA+L+QAYRW+ DSRDE T +RL++L+DPF +YRC
Sbjct: 171 YECILCACCSTSCPSYWWNSDKFLGPAILLQAYRWLADSRDEYTGERLDELEDPFRLYRC 230
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
HTIMNC CPKGL+P +AIAE KK++
Sbjct: 231 HTIMNCANVCPKGLSPAKAIAETKKMM 257
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLDAL+KIKNE DPTLTFRRSCREGICGSC+MN+ G N LAC + ID K +I PL
Sbjct: 59 MVLDALLKIKNEYDPTLTFRRSCREGICGSCSMNMNGKNGLACTTAIDECAGKQVQITPL 118
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD +FYAQY SI+ PW
Sbjct: 119 PHMDVIKDLVPDFTHFYAQYNSIK-----PW 144
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K +I PLPHM V+KDLVPD +FYAQY SI+PWL
Sbjct: 111 KQVQITPLPHMDVIKDLVPDFTHFYAQYNSIKPWL 145
>gi|407778317|ref|ZP_11125582.1| succinate dehydrogenase iron-sulfur subunit [Nitratireductor
pacificus pht-3B]
gi|407299998|gb|EKF19125.1| succinate dehydrogenase iron-sulfur subunit [Nitratireductor
pacificus pht-3B]
Length = 259
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 144/235 (61%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + +YRW+PD D P + Y +D++ NKID
Sbjct: 22 EGAKNLREYKVYRWSPDDGD-NPRVDTYYIDMDDCGPMVLDGLIYIKNKIDPTLTFRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D+++ KIYPLPHM VVKDLVPD++ YAQ SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACTKGMDEINASVKIYPLPHMPVVKDLVPDLSVPYAQLSSIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ ++ QS +DR KLDGLYECILC CC TSCPSYWWNGE+YLGPAVL+QA
Sbjct: 141 PWLQTVTPEPA-TEWKQSHEDRTKLDGLYECILCFCCQTSCPSYWWNGERYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIA IKK++
Sbjct: 200 YRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCTQACPKGLNPAKAIANIKKMM 254
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC +D + KIYPLP
Sbjct: 58 MVLDGLIYIKNKIDPTLTFRRSCREGICGSCAMNIDGTNTLACTKGMDEINASVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDLVPD++ YAQ SI+ PW L T+T + ++ S
Sbjct: 118 HMPVVKDLVPDLSVPYAQLSSIE-----PW--LQTVTPEPATEWKQS 157
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D + KIYPLPHM VVKDLVPD++ YAQ SI+PWL
Sbjct: 94 GTNTLACTKGMDEINASVKIYPLPHMPVVKDLVPDLSVPYAQLSSIEPWL 143
>gi|170744098|ref|YP_001772753.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium sp. 4-46]
gi|168198372|gb|ACA20319.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylobacterium sp. 4-46]
Length = 260
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 124/151 (82%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D +IYPLPHM V+KDLVPD+++F+AQ+ +I+PWLQ + + ++ Q+ +DR +
Sbjct: 106 DCRSAQIRIYPLPHMPVLKDLVPDLSSFFAQHAAIEPWLQTETPS-PEKEWRQTPEDRAR 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACC+TSCPSYWWNG+++LGPA L+QAYRW+IDSRDE T +RL+ L DPF
Sbjct: 165 LDGLYECILCACCTTSCPSYWWNGDRFLGPAALLQAYRWLIDSRDEHTGERLDILHDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC TCPKGLNP +AIAEIKK++
Sbjct: 225 LYRCHTIMNCANTCPKGLNPAKAIAEIKKMM 255
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 71/91 (78%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDAL+ IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC I D +IYPL
Sbjct: 58 MVLDALLWIKNKVDPTLTFRRSCREGICGSCAMNIMGQNTLACTLGIDDCRSAQIRIYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V+KDLVPD+++F+AQ+ +I+ PW
Sbjct: 118 PHMPVLKDLVPDLSSFFAQHAAIE-----PW 143
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D +IYPLPHM V+KDLVPD+++F+AQ+ +I+PWL
Sbjct: 106 DCRSAQIRIYPLPHMPVLKDLVPDLSSFFAQHAAIEPWL 144
>gi|340034808|gb|AEK28747.1| SdhB [Botryotinia fuckeliana]
Length = 176
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 120/146 (82%)
Query: 159 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
+KIYPLPH YVVKD+VPD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYE
Sbjct: 30 TKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYE 89
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRC+T
Sbjct: 90 CILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCYT 149
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NC+RTCPKGLNPG AIAEIKK ++
Sbjct: 150 ILNCSRTCPKGLNPGLAIAEIKKEMA 175
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 26 GICGSCAMNIGGVNTLACISKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQR 84
GICGSCAMNI GVNTLAC+ +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+
Sbjct: 1 GICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKP 60
Query: 85 HLG-------GPWKILGTLTAKNIRSFQ---LSAAASSAVPAE--KPAKYKTFAI----Y 128
+L G + K + L A S++ P+ +Y AI Y
Sbjct: 61 YLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSY 120
Query: 129 RWNPDKPDEKPTMQEYKVDLNNKI 152
RW D D+K +E K L+N +
Sbjct: 121 RWLADSRDQK--KEERKAALDNSM 142
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 12 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 62
>gi|294085396|ref|YP_003552156.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292664971|gb|ADE40072.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 258
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 148/244 (60%), Gaps = 50/244 (20%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------- 150
+++ + PA+ ++ KTF IYRW+PD D P + + +DL++
Sbjct: 11 KITKGEAYKAPADS-SRVKTFQIYRWSPDD-DRNPRIDSFDIDLDDCGPMVLDALIKIKS 68
Query: 151 ----------------------KIDANDKVS------------KIYPLPHMYVVKDLVPD 176
ID + ++ KIYPLPHM VVKDLVPD
Sbjct: 69 EHDSSLTFRRSCREGICGSCSMNIDGTNTLACLKSIDDVKDDVKIYPLPHMPVVKDLVPD 128
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
++N Y Q SI+PWL+ DK + + QS DDR+KLDGL+EC+LC CST+CPSYWWN
Sbjct: 129 LSNAYRQLASIEPWLKTDKTASADGERKQSQDDREKLDGLWECVLCFSCSTACPSYWWNS 188
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAI 296
++YLGPAVL+QAYRWI DSRD+ +RL+ L D F++YRCHTIMNC +TCPKGLNPG+AI
Sbjct: 189 DEYLGPAVLLQAYRWISDSRDDYKKERLDALDDSFALYRCHTIMNCAKTCPKGLNPGKAI 248
Query: 297 AEIK 300
A IK
Sbjct: 249 AGIK 252
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E D +LTFRRSCREGICGSC+MNI G NTLAC+ ID KIYPLP
Sbjct: 58 MVLDALIKIKSEHDSSLTFRRSCREGICGSCSMNIDGTNTLACLKSIDDVKDDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++N Y Q SI+ PW
Sbjct: 118 HMPVVKDLVPDLSNAYRQLASIE-----PW 142
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Query: 236 GEKYLGPA-----VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
GE Y PA Q YRW D D + D ++ L
Sbjct: 15 GEAYKAPADSSRVKTFQIYRWSPDDDRNPRIDSFDIDLDDCGPMVLDALIKIKSEHDSSL 74
Query: 291 NPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNN 349
R+ E + G + G +T A L ID KIYPLPHM VVKDLVPD++N
Sbjct: 75 TFRRSCRE---GICGSCSMNIDGTNTLACLKSIDDVKDDVKIYPLPHMPVVKDLVPDLSN 131
Query: 350 FYAQYKSIQPWL 361
Y Q SI+PWL
Sbjct: 132 AYRQLASIEPWL 143
>gi|254781044|ref|YP_003065457.1| succinate dehydrogenase iron-sulfur subunit [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040721|gb|ACT57517.1| succinate dehydrogenase iron-sulfur subunit [Candidatus
Liberibacter asiaticus str. psy62]
Length = 259
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 144/229 (62%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K + IYRWNPD P M Y VDL+N
Sbjct: 28 KEYRIYRWNPDNKGN-PCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + ++ +YPLPHM V+KDLV DM++FY+Q++SI+PWL+
Sbjct: 87 SCGMNIDGTNTLACVKDMKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTV 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ LQS +DR+K+DGLYEC++CACCSTSCPSYWWN ++YLGPA+L+QAYRW+ID
Sbjct: 147 SPKPAK-ELLQSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLID 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE +RL+ L+DPF +YRCHTIMNCT++CPKGLNP +AIA+IK +L
Sbjct: 206 SRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMML 254
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 7/99 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+ IKN++DPTLT RRSCREGICGSC MNI G NTLAC+ + +YPLP
Sbjct: 58 MVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMKDIKGAIAVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAK 99
HM V+KDLV DM++FY+Q++SI+ PW L T++ K
Sbjct: 118 HMSVIKDLVVDMSHFYSQHRSIE-----PW--LKTVSPK 149
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 29/31 (93%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+YPLPHM V+KDLV DM++FY+Q++SI+PWL
Sbjct: 113 VYPLPHMSVIKDLVVDMSHFYSQHRSIEPWL 143
>gi|389586239|dbj|GAB68968.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium
cynomolgi strain B]
Length = 343
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 150/238 (63%), Gaps = 51/238 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------KIDAN------------- 155
K F+I+R+NP + +++P M+ ++VD++N +ID+
Sbjct: 90 KKFSIFRYNP-QNNKRPKMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGICG 148
Query: 156 ----------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+V++I+PLP++Y++KDLVPD+ NFY QYKSI PWL+R
Sbjct: 149 SCAMNINGKNGLACLTEVNKDKKEVTEIHPLPNLYIIKDLVPDLTNFYNQYKSIDPWLKR 208
Query: 194 D-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
K+ G ++ QS++DRKKLDGLYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI
Sbjct: 209 KTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWI 268
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
+DSRDE T +RL ++ D +YRCH IMNCT CPKGL+P +AI +K+L+ K+
Sbjct: 269 VDSRDEYTKERLMEVNDTMKLYRCHGIMNCTLCCPKGLDPAKAIRNMKELVQENFSKE 326
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 6/108 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K V++I+PL
Sbjct: 120 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKDKKEVTEIHPL 179
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
P++Y++KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 180 PNLYIIKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQS 222
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
M+ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 107 METFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 156
Query: 306 LVKKDKPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K V++I+PLP++Y++KDLVPD+ NFY QYKSI PWL R
Sbjct: 157 -----KNGL--ACLTEVNKDKKEVTEIHPLPNLYIIKDLVPDLTNFYNQYKSIDPWLKR 208
>gi|365884959|ref|ZP_09423985.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. ORS 375]
gi|365286507|emb|CCD96516.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. ORS 375]
Length = 260
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 145/248 (58%), Gaps = 52/248 (20%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
++ Q++ + PA + + F +YRWNPD + P++ Y VD+N
Sbjct: 8 KNSQITGGKTWPKPA-GATEVREFRVYRWNPDD-GKNPSVDTYYVDVNDCGPMVLDGLIW 65
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N ID + D KI PLPH VVKD
Sbjct: 66 IKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQPVVKD 125
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ NFYAQY SI+PWL + ++ QS +DR+KLDGLYECILCACCSTSCPSY
Sbjct: 126 LVPDLTNFYAQYASIEPWL-KTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSY 184
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN E+YLGPA L+QA RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP
Sbjct: 185 WWNSERYLGPAALLQATRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNP 244
Query: 293 GRAIAEIK 300
AIAE+K
Sbjct: 245 AEAIAELK 252
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|456351821|dbj|BAM86266.1| succinate dehydrogenase, Fe-S protein [Agromonas oligotrophica S58]
Length = 260
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 145/248 (58%), Gaps = 52/248 (20%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
++ Q++ S PA + + F +YRWNPD + P++ + VD+N
Sbjct: 8 KNSQITGGKSWPKPA-GATEVREFKVYRWNPDD-GKNPSVDTFYVDVNDCGPMVLDGLIW 65
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N ID + D K+ PLPH VVKD
Sbjct: 66 IKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTKSMHDVKDGAVKVNPLPHQPVVKD 125
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ NFYAQY SI+PWL + ++ QS +DR+KLDGLYECILCACCSTSCPSY
Sbjct: 126 LVPDLTNFYAQYASIEPWL-KTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSY 184
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN E+YLGPA L+QA RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP
Sbjct: 185 WWNSERYLGPAALLQATRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNP 244
Query: 293 GRAIAEIK 300
AIAE+K
Sbjct: 245 AEAIAELK 252
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D K+ PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTKSMHDVKDGAVKVNPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D K+ PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TKSMH--DVKDGAVKVNPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|340034806|gb|AEK28746.1| SdhB [Botryotinia fuckeliana]
Length = 176
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 119/146 (81%)
Query: 159 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
+KIYPLPH YVVKD+VPD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYE
Sbjct: 30 TKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYE 89
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRC T
Sbjct: 90 CILCACCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCRT 149
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NC+RTCPKGLNPG AIAEIKK ++
Sbjct: 150 ILNCSRTCPKGLNPGLAIAEIKKEMA 175
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 26 GICGSCAMNIGGVNTLACISKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQR 84
GICGSCAMNI GVNTLAC+ +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+
Sbjct: 1 GICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKP 60
Query: 85 HLG-------GPWKILGTLTAKNIRSFQ---LSAAASSAVPAE--KPAKYKTFAI----Y 128
+L G + K + L A S++ P+ +Y AI Y
Sbjct: 61 YLQHTDPAPEGKEYLQSKEDRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSY 120
Query: 129 RWNPDKPDEKPTMQEYKVDLNNKI 152
RW D D+K +E K L+N +
Sbjct: 121 RWLADSRDQK--KEERKAALDNSM 142
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L
Sbjct: 12 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYL 62
>gi|167648792|ref|YP_001686455.1| succinate dehydrogenase iron-sulfur subunit [Caulobacter sp. K31]
gi|167351222|gb|ABZ73957.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Caulobacter sp. K31]
Length = 260
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 101/155 (65%), Positives = 118/155 (76%), Gaps = 1/155 (0%)
Query: 149 NNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLD 208
+ D K +I PLP VVKDL+PD+ FYAQY SI+PWL ++ QS +
Sbjct: 102 HGHADTPGKAVQISPLPSQPVVKDLIPDLTLFYAQYASIEPWLHTVTPE-PQTEWKQSPE 160
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECILCACCSTSCPSYWWNG+KYLGPA L+ AYRW+IDSRDE T DRL+ L+
Sbjct: 161 DRSKLDGLYECILCACCSTSCPSYWWNGDKYLGPATLLHAYRWLIDSRDEATGDRLDNLE 220
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DPF +YRCHTIMNC + CPKGLNP +AIAEIKK+L
Sbjct: 221 DPFKLYRCHTIMNCAQVCPKGLNPAKAIAEIKKML 255
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACI-SKIDANDKVSKIYPL 59
MVLDAL+ IKN +DPTL FRRSCREG+CGSCAMNIGG NTLAC D K +I PL
Sbjct: 58 MVLDALLYIKNTIDPTLAFRRSCREGVCGSCAMNIGGRNTLACTHGHADTPGKAVQISPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
P VVKDL+PD+ FYAQY SI+ PW
Sbjct: 118 PSQPVVKDLIPDLTLFYAQYASIE-----PW 143
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D K +I PLP VVKDL+PD+ FYAQY SI+PWL
Sbjct: 106 DTPGKAVQISPLPSQPVVKDLIPDLTLFYAQYASIEPWL 144
>gi|384262918|ref|YP_005418106.1| Succinate dehydrogenase subunit B [Rhodospirillum photometricum DSM
122]
gi|378404020|emb|CCG09136.1| Succinate dehydrogenase subunit B [Rhodospirillum photometricum DSM
122]
Length = 260
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/226 (47%), Positives = 138/226 (61%), Gaps = 49/226 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
+ F IYRW+P++ P M + VD++
Sbjct: 28 RVFKIYRWDPEE-GGNPRMDTFHVDMDACGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID N+ ++ I PLPH+ VVKDLVPD+++ YAQY +I+PWL+ D
Sbjct: 87 SCSMNIDTNNTLACLKPIADIKGDVVITPLPHLPVVKDLVPDLSHIYAQYAAIEPWLKAD 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
N + LQS D+R LDG++ECILC CC+TSCPSYWWNG++YLGPAVLMQA RWI D
Sbjct: 147 TPAPPNGERLQSPDERAVLDGMWECILCFCCTTSCPSYWWNGDRYLGPAVLMQAARWIFD 206
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
SRDE +RL+QL DPF ++RCHTIMNCT TCPKGLNPGRAI ++K
Sbjct: 207 SRDEAAGERLDQLDDPFRLFRCHTIMNCTATCPKGLNPGRAIGQLK 252
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 71/105 (67%), Gaps = 5/105 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSC+MNI NTLAC+ I I PLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIDTNNTLACLKPIADIKGDVVITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ 105
H+ VVKDLVPD+++ YAQY +I+ PW T N Q
Sbjct: 118 HLPVVKDLVPDLSHIYAQYAAIE-----PWLKADTPAPPNGERLQ 157
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPH+ VVKDLVPD+++ YAQY +I+PWL
Sbjct: 113 ITPLPHLPVVKDLVPDLSHIYAQYAAIEPWL 143
>gi|340034810|gb|AEK28748.1| SdhB [Botryotinia fuckeliana]
Length = 176
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 119/146 (81%)
Query: 159 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYE 218
+KIYPLPH YVVKD+VPD+ FY QYKSI+P+LQ +YLQS +DRKKLDGLYE
Sbjct: 30 TKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQHTDPAPEGKEYLQSKEDRKKLDGLYE 89
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT 278
CILCACCSTSC SYWWN E+YLGPA+L+Q+YRW+ DSRD+K +R L + S+YRCHT
Sbjct: 90 CILCACCSTSCFSYWWNSEEYLGPAILLQSYRWLADSRDQKKEERKAALDNSMSLYRCHT 149
Query: 279 IMNCTRTCPKGLNPGRAIAEIKKLLS 304
I+NC+RTCPKGLNPG AIAEIKK ++
Sbjct: 150 ILNCSRTCPKGLNPGLAIAEIKKEMA 175
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 26 GICGSCAMNIGGVNTLACISKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQR 84
GICGSCAMNI GVNTLAC+ +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+
Sbjct: 1 GICGSCAMNIDGVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKP 60
Query: 85 HL 86
+L
Sbjct: 61 YL 62
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K +KIYPLPH YVVKD+VPD+ FY QYKSI+P+L +
Sbjct: 12 GVNTLACLCRIPRDAKHETKIYPLPHTYVVKDIVPDLTQFYKQYKSIKPYLQHT 65
>gi|89573803|gb|ABD77127.1| succinate dehydrogenase complex subunit B [Didelphis virginiana]
Length = 195
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 133/195 (68%), Gaps = 50/195 (25%)
Query: 128 YRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------------ 155
YRW+PDK +KP MQ Y+VDLN N++DA
Sbjct: 1 YRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDATLTFRRSCREGICGSCAMN 60
Query: 156 -----------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKEN 197
+KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L++ D+
Sbjct: 61 INGGNTLACTRRIDTNLNKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYLKKKDESQ 120
Query: 198 IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRD 257
G AQYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD
Sbjct: 121 EGKAQYLQSMEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRD 180
Query: 258 EKTADRLNQLKDPFS 272
+ T +RL QL+DPFS
Sbjct: 181 DFTEERLAQLQDPFS 195
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 27 MVLDALIKIKNEVDATLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 86
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD+NNFYAQYKSIQ +L
Sbjct: 87 PHMYVMKDLVPDLNNFYAQYKSIQPYL 113
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD+NNFYAQYKSIQP+L +
Sbjct: 64 GNTLACTRRIDTNLNKVSKIYPLPHMYVMKDLVPDLNNFYAQYKSIQPYLKK 115
>gi|330813450|ref|YP_004357689.1| succinate dehydrogenase iron-sulfur protein [Candidatus
Pelagibacter sp. IMCC9063]
gi|327486545|gb|AEA80950.1| succinate dehydrogenase iron-sulfur protein [Candidatus
Pelagibacter sp. IMCC9063]
Length = 257
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 117/144 (81%), Gaps = 3/144 (2%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIG-NAQYLQSLDDRKKLDGLYEC 219
IYPLPHM V+KDLVPD+ Y QY+SI+PW+Q E G A+ LQS++DR K+DGLYEC
Sbjct: 113 IYPLPHMPVIKDLVPDLKQLYKQYESIEPWMQ--SETTGKEAEKLQSIEDRSKIDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWNG+KYLGPAVL+QAYRWI+DSRD++ RL ++ D ++RCHTI
Sbjct: 171 ILCACCSTSCPSYWWNGDKYLGPAVLLQAYRWIVDSRDDERKKRLKKVADELKLFRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNCT CPKGLNP +AI IKK+L
Sbjct: 231 MNCTNACPKGLNPAKAIGSIKKML 254
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 82/149 (55%), Gaps = 32/149 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LIKIKNE+D T+TFRRSCREGICGSCAMNI G NTLAC+ + IYPLP
Sbjct: 58 MVLDVLIKIKNEIDSTVTFRRSCREGICGSCAMNIDGSNTLACLKPAEEISGDINIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ--------------- 105
HM V+KDLVPD+ Y QY+SI+ PW + T K Q
Sbjct: 118 HMPVIKDLVPDLKQLYKQYESIE-----PW-MQSETTGKEAEKLQSIEDRSKIDGLYECI 171
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ Y WN DK
Sbjct: 172 LCACCSTSCPS-----------YWWNGDK 189
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLVPD+ Y QY+SI+PW+
Sbjct: 113 IYPLPHMPVIKDLVPDLKQLYKQYESIEPWM 143
>gi|221061271|ref|XP_002262205.1| Iron-sulfur subunit of succinate dehydrogenase [Plasmodium knowlesi
strain H]
gi|193811355|emb|CAQ42083.1| Iron-sulfur subunit of succinate dehydrogenase,putative [Plasmodium
knowlesi strain H]
Length = 316
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 167/300 (55%), Gaps = 62/300 (20%)
Query: 72 MNNFYAQYKSIQRHLGGPWKILGTL----TAKNIRSFQLSAAASSAVPAEKPAK------ 121
M A+ + +H W IL TA+N Q + S AK
Sbjct: 1 MGRSAAKVATDDQHNYKEWTILNNRRFLSTAQNTGMNQTTGKDESVKEKFDHAKNSMQQN 60
Query: 122 -YKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------KIDAN----------- 155
K F+I+R+NP + ++P M+ ++VD++N +ID+
Sbjct: 61 ELKKFSIFRYNP-QNSKRPKMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGI 119
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
++++I+PLP++Y++KDLVPD+ NFY QYKSI PWL
Sbjct: 120 CGSCAMNINGKNGLACLTEVNKDKKEITEIHPLPNLYIIKDLVPDLTNFYNQYKSIDPWL 179
Query: 192 QRD-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
+R K+ G ++ QS++DRKKLDGLYECI+CA CSTSCPSYWWN E YLGPA LMQAYR
Sbjct: 180 KRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYR 239
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
WI+DSRDE T +RL ++ D +YRCH IMNCT CPKGL+P +AI +K+L+ K+
Sbjct: 240 WIVDSRDEYTKERLMEVNDTMKLYRCHGIMNCTLCCPKGLDPAKAIRNMKELVQENFSKE 299
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 28/160 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K +++I+PL
Sbjct: 93 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKDKKEITEIHPL 152
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------ 107
P++Y++KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 153 PNLYIIKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYE 207
Query: 108 ----AAASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
A+ S++ P+ P Y YRW D DE
Sbjct: 208 CIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDSRDE 247
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
M+ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 80 METFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 129
Query: 306 LVKKDKPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K +++I+PLP++Y++KDLVPD+ NFY QYKSI PWL R
Sbjct: 130 -----KNGL--ACLTEVNKDKKEITEIHPLPNLYIIKDLVPDLTNFYNQYKSIDPWLKR 181
>gi|389811866|ref|ZP_10206281.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
thiooxydans LCS2]
gi|388440022|gb|EIL96450.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
thiooxydans LCS2]
Length = 251
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPHM V++D+VPD +FYAQY SIQPW++ D G+ + LQS DRKKLDGLYECI
Sbjct: 105 IYPLPHMPVIRDVVPDFTHFYAQYASIQPWIKTDSP-AGSRERLQSPKDRKKLDGLYECI 163
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACC+ SCPSYWWN +++LGPAVL+QAYRWI+DSRDE T +RL+ L DPF ++RCH I+
Sbjct: 164 LCACCTASCPSYWWNPDRFLGPAVLLQAYRWIVDSRDEATGERLDDLNDPFKLFRCHAIL 223
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
N T TCPKGLNP +AIA+IK+L++
Sbjct: 224 NGTNTCPKGLNPAKAIAKIKRLIA 247
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD L+KIKN +DPTLT RRSCREG+CGSC+MNI G NTLACI+ + D IYPL
Sbjct: 49 MVLDVLLKIKNTIDPTLTLRRSCREGVCGSCSMNINGENTLACITPLDDLRAGQVNIYPL 108
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM V++D+VPD +FYAQY SIQ PW
Sbjct: 109 PHMPVIRDVVPDFTHFYAQYASIQ-----PW 134
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V++D+VPD +FYAQY SIQPW+
Sbjct: 105 IYPLPHMPVIRDVVPDFTHFYAQYASIQPWI 135
>gi|300176530|emb|CBK24195.2| Succinate dehydrogenase iron-sulphur subunit (SDHB) [Blastocystis
hominis]
Length = 273
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 144/240 (60%), Gaps = 53/240 (22%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------- 150
KP YK F+I+R++ ++ D KP ++Y VD+N+
Sbjct: 35 KPKNYKIFSIFRFDNER-DNKPHYEKYAVDMNDCGTMVLDALFKIKNEQDPTFVFRRSCR 93
Query: 151 ---------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
KI ++KV + PLPH+YV+KDLV D+ NFY QY SI+P
Sbjct: 94 EGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLPHLYVIKDLVADLTNFYEQYASIKP 153
Query: 190 WLQRDKENIGN---AQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
WLQ+ K + + LQS +DR LDGLYECILCACCSTSCPSYWW+G+KYLGP++L
Sbjct: 154 WLQK-KSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSILQ 212
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
QAYRWI DSRDE T +RL L D + +YRCH IMNCT CPK LNPGR+I ++KK + +
Sbjct: 213 QAYRWIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKKAIHHM 272
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 92/155 (59%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE DPT FRRSCREGICGSCAMNI G N LAC++KI ++KV + PLP
Sbjct: 70 MVLDALFKIKNEQDPTFVFRRSCREGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLP 129
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
H+YV+KDLV D+ NFY QY SI+ L + +N++S + L A
Sbjct: 130 HLYVIKDLVADLTNFYEQYASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCA 189
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY +I YRW D DE
Sbjct: 190 CCSTSCPSYWWHGDKYLGPSILQQAYRWIADSRDE 224
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI ++KV + PLPH+YV+KDLV D+ NFY QY SI+PWL +
Sbjct: 111 ACLTKIPKDNKVCTVRPLPHLYVIKDLVADLTNFYEQYASIKPWLQK 157
>gi|146337400|ref|YP_001202448.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp. ORS
278]
gi|367475761|ref|ZP_09475201.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. ORS 285]
gi|146190206|emb|CAL74198.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. ORS 278]
gi|365271939|emb|CCD87669.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. ORS 285]
Length = 260
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 145/248 (58%), Gaps = 52/248 (20%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
++ Q++ + PA + + F +YRWNPD + P++ Y VD+N
Sbjct: 8 KNSQITGGKTWPKPA-GATEVREFKVYRWNPDD-GKNPSVDTYYVDVNDCGPMVLDGLIW 65
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N ID + D KI PLPH VVKD
Sbjct: 66 IKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQPVVKD 125
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ NFYAQY SI+PWL + ++ Q+ +DR+KLDGLYECILCACCSTSCPSY
Sbjct: 126 LVPDLTNFYAQYASIEPWL-KTTTPTPQKEWKQTHEDREKLDGLYECILCACCSTSCPSY 184
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN E+YLGPA L+QA RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP
Sbjct: 185 WWNSERYLGPAALLQATRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNP 244
Query: 293 GRAIAEIK 300
AIAE+K
Sbjct: 245 AEAIAELK 252
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|365892133|ref|ZP_09430466.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. STM 3809]
gi|365331852|emb|CCE02997.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. STM 3809]
Length = 260
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 145/248 (58%), Gaps = 52/248 (20%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------ 149
++ Q++ + PA + + F +YRWNPD + P++ Y VD+N
Sbjct: 8 KNSQITGGKTWPKPA-GATEVREFRVYRWNPDD-GKNPSVDTYYVDVNDCGPMVLDGLIW 65
Query: 150 --NKIDAN-----------------------------------DKVSKIYPLPHMYVVKD 172
N ID + D KI PLPH VVKD
Sbjct: 66 IKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQPVVKD 125
Query: 173 LVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232
LVPD+ NFYAQY SI+PWL + ++ Q+ +DR+KLDGLYECILCACCSTSCPSY
Sbjct: 126 LVPDLTNFYAQYASIEPWL-KTTTPTPQKEWKQTHEDREKLDGLYECILCACCSTSCPSY 184
Query: 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WWN E+YLGPA L+QA RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP
Sbjct: 185 WWNSERYLGPAALLQATRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNP 244
Query: 293 GRAIAEIK 300
AIAE+K
Sbjct: 245 AEAIAELK 252
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|254439971|ref|ZP_05053465.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Octadecabacter antarcticus 307]
gi|198255417|gb|EDY79731.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Octadecabacter antarcticus 307]
Length = 259
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+IYPLPHM V+KDL+PD+ +FYAQ+ S++PWL+ K N ++ QS++DR KLDGLYEC
Sbjct: 112 RIYPLPHMPVIKDLIPDLTHFYAQHASVKPWLET-KTNKPAKEWKQSIEDRAKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CACCST+CPSYWWNG+K+LGPA L+ A RWI DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 VMCACCSTACPSYWWNGDKFLGPAALLTANRWITDSRDEATGERLDDLEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP AIA +KK++
Sbjct: 231 MNCAKTCPKGLNPAAAIANVKKMM 254
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 81/107 (75%), Gaps = 7/107 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+++DPTLTFRRSCREGICGSCAMNI G+NTLACI +D +IYPLP
Sbjct: 58 MVLDALIKIKSDIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDIRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM V+KDL+PD+ +FYAQ+ S++ PW L T T K + ++ S
Sbjct: 118 HMPVIKDLIPDLTHFYAQHASVK-----PW--LETKTNKPAKEWKQS 157
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D +IYPLPHM V+KDL+PD+ +FYAQ+ S++PWL
Sbjct: 94 GINTLACIYGMDEVKGDIRIYPLPHMPVIKDLIPDLTHFYAQHASVKPWL 143
>gi|124805779|ref|XP_001350535.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium
falciparum 3D7]
gi|6694863|gb|AAF25442.1|AF217618_1 succinate dehydrogenase iron-sulfur subunit [Plasmodium falciparum]
gi|23496659|gb|AAN36215.1|AE014846_14 iron-sulfur subunit of succinate dehydrogenase [Plasmodium
falciparum 3D7]
gi|1510135|dbj|BAA13120.1| iron-sulfur subunit of succinate dehydrogenase [Plasmodium
falciparum]
Length = 321
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 155/261 (59%), Gaps = 53/261 (20%)
Query: 102 RSFQLSAAAS--SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------- 150
+ F++ + V E + K F+I+R+NP ++P M+ ++VD++N
Sbjct: 45 KEFEMKKQVEQINKVNGEVVKRKKKFSIFRYNPTNK-KRPQMETFEVDIDNCGPMVLDVL 103
Query: 151 -----KIDAN-----------------------------------DKVSKIYPLPHMYVV 170
+ID+ ++++I PLP++YV+
Sbjct: 104 IKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNRDKKEITEIQPLPNLYVM 163
Query: 171 KDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSC 229
KDLVPD+ NFY QYKSI PWL+R K+ G ++ QS++DRKKLDGLYECI+CA CSTSC
Sbjct: 164 KDLVPDLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSC 223
Query: 230 PSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289
PSYWWN E YLGPA LMQAYRWI+DSRDE T +RL ++ D +YRCH IMNCT CPKG
Sbjct: 224 PSYWWNPEYYLGPATLMQAYRWIVDSRDEYTKERLMEVNDTMKLYRCHGIMNCTMCCPKG 283
Query: 290 LNPGRAIAEIKKLLSGLVKKD 310
L+P +AI ++K L+ +D
Sbjct: 284 LDPAKAIKDMKNLVQENFSED 304
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 94/160 (58%), Gaps = 28/160 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K +++I PL
Sbjct: 98 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNRDKKEITEIQPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------ 107
P++YV+KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 158 PNLYVMKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYE 212
Query: 108 ----AAASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
A+ S++ P+ P Y YRW D DE
Sbjct: 213 CIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDSRDE 252
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
M+ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 85 METFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 134
Query: 306 LVKKDKPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K +++I PLP++YV+KDLVPD+ NFY QYKSI PWL R
Sbjct: 135 -----KNGL--ACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKR 186
>gi|84999578|ref|XP_954510.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein [Theileria
annulata]
gi|65305508|emb|CAI73833.1| succinate dehydrogenase [ubiquinone] iron-sulfur protein, putative
[Theileria annulata]
Length = 277
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 145/242 (59%), Gaps = 52/242 (21%)
Query: 113 AVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID----- 153
++P P K F+++R+ P+ EKP +Q Y VD N N++D
Sbjct: 12 SIPVLSP-KNVNFSVFRYTPNS-KEKPRIQTYTVDTNDCGPMILDALIKIKNEMDSTLTF 69
Query: 154 -------------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYA 182
A+ +I PLP MYV+KDLVPD+ NFY
Sbjct: 70 RRSCREGICGSCAMNINGENGLACLMDIEKHASKGTVEIQPLPGMYVLKDLVPDLTNFYE 129
Query: 183 QYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
QY+S++PWL+R G+ +Y QS +DR+KLDGLYECILCACCSTSCPSYWWN E YLGP
Sbjct: 130 QYRSVEPWLKRKTPKEGDKEYYQSKEDRQKLDGLYECILCACCSTSCPSYWWNPEHYLGP 189
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
A LMQAYRWI DSRDE T +RL ++ D +YRCH I+NCT+ CPKGL+P +I+++KKL
Sbjct: 190 AALMQAYRWIADSRDEYTTERLVEVNDTMKLYRCHGILNCTKVCPKGLDPAGSISKLKKL 249
Query: 303 LS 304
+
Sbjct: 250 VE 251
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 98/175 (56%), Gaps = 30/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
M+LDALIKIKNEMD TLTFRRSCREGICGSCAMNI G N LAC+ I+ A+ +I P
Sbjct: 51 MILDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGENGLACLMDIEKHASKGTVEIQP 110
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------- 105
LP MYV+KDLVPD+ NFY QY+S++ PW T + +Q
Sbjct: 111 LPGMYVLKDLVPDLTNFYEQYRSVE-----PWLKRKTPKEGDKEYYQSKEDRQKLDGLYE 165
Query: 106 --LSAAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A S++ P+ P Y YRW D DE T E V++N+ +
Sbjct: 166 CILCACCSTSCPSYWWNPEHYLGPAALMQAYRWIADSRDEYTT--ERLVEVNDTM 218
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 324 ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A+ +I PLP MYV+KDLVPD+ NFY QY+S++PWL R
Sbjct: 101 ASKGTVEIQPLPGMYVLKDLVPDLTNFYEQYRSVEPWLKR 140
>gi|1352265|sp|P48933.1|DHSB_CYACA RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit; AltName: Full=Iron-sulfur subunit of complex
II; Short=Ip
gi|758172|emb|CAA88766.1| subunit of succinate dehydrogenase (iron sulfur protein) [Cyanidium
caldarium]
Length = 262
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 118/156 (75%)
Query: 151 KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDR 210
K++ + + +YPLPH++V+KDLV D+ NFYAQY+ IQPWLQ + QS DR
Sbjct: 96 KLNIKNNIIYVYPLPHIFVLKDLVVDLTNFYAQYRLIQPWLQSSLNIKSKKEIYQSKQDR 155
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
LDGLYECILCACCS SCPSYWWN +KYLGPAVL+QAYRWI+DSRD+ T RL LKD
Sbjct: 156 LYLDGLYECILCACCSASCPSYWWNHDKYLGPAVLLQAYRWIVDSRDDNTLSRLLSLKDS 215
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
+ +YRCHTIMNCT+TCPK LNPG+ IA IKK L L
Sbjct: 216 YKLYRCHTIMNCTKTCPKHLNPGKVIASIKKRLLNL 251
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
+VLDALIKIKNE D T++FRRSCREGICGSCA+NI G N+LAC+ K++ + + +YPLP
Sbjct: 51 IVLDALIKIKNECDSTVSFRRSCREGICGSCAININGTNSLACLQKLNIKNNIIYVYPLP 110
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H++V+KDLV D+ NFYAQY+ IQ PW
Sbjct: 111 HIFVLKDLVVDLTNFYAQYRLIQ-----PW 135
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRSI 365
A L K++ + + +YPLPH++V+KDLV D+ NFYAQY+ IQPWL S+
Sbjct: 92 ACLQKLNIKNNIIYVYPLPHIFVLKDLVVDLTNFYAQYRLIQPWLQSSL 140
>gi|296532574|ref|ZP_06895280.1| succinate dehydrogenase [Roseomonas cervicalis ATCC 49957]
gi|296267099|gb|EFH13018.1| succinate dehydrogenase [Roseomonas cervicalis ATCC 49957]
Length = 260
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 146/237 (61%), Gaps = 50/237 (21%)
Query: 116 AEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
AE AK KTF IYR++PD E P Y++DL+ N++D
Sbjct: 20 AEPGAKNVKTFKIYRFDPDT-GENPRYDTYEIDLDKCGPMVLDALIKIKNEVDTTLTFRR 78
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
K +I PLPHM VVKDLVPD+++ YAQ +S
Sbjct: 79 SCREGICGSCAMNIDGMNTLACLKPIEDVKKDVRITPLPHMPVVKDLVPDLSHIYAQLRS 138
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL+ D + + QS ++R KLDGL+ECILC CCST+CPSYWWNG++YLGPAVL+
Sbjct: 139 IEPWLKSDTPPPPDEERRQSKEERAKLDGLWECILCFCCSTACPSYWWNGDRYLGPAVLL 198
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QAYRWI DSRDE T +RL+ L+DPF +YRCHTIMNC TCPKGLNP +AI +IK+++
Sbjct: 199 QAYRWIADSRDEYTGERLDNLEDPFRLYRCHTIMNCAATCPKGLNPAQAIGKIKQMM 255
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G+NTLAC+ I+ K +I PLP
Sbjct: 58 MVLDALIKIKNEVDTTLTFRRSCREGICGSCAMNIDGMNTLACLKPIEDVKKDVRITPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+++ YAQ +SI+ PW
Sbjct: 118 HMPVVKDLVPDLSHIYAQLRSIE-----PW 142
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L I+ K +I PLPHM VVKDLVPD+++ YAQ +SI+PWL
Sbjct: 94 GMNTLACLKPIEDVKKDVRITPLPHMPVVKDLVPDLSHIYAQLRSIEPWL 143
>gi|21555840|gb|AAM63946.1| succinate dehydrogenase iron-protein subunit, putative [Arabidopsis
thaliana]
Length = 279
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 138/249 (55%), Gaps = 50/249 (20%)
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------ 150
S A ++ + + KTF IYRWNPD P KP +Q Y++DL +
Sbjct: 30 STGAEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKI 88
Query: 151 ------------------------------------KIDANDKVSKIYPLPHMYVVKDLV 174
KI + I PLPHM+V+KDLV
Sbjct: 89 KNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLV 148
Query: 175 PDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
DM NFY QYKSI+PWL+R ++ + LQS DR KLDG+YECILCAC STSCPSYW
Sbjct: 149 VDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACFSTSCPSYW 208
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
W E YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CPKGLNPG
Sbjct: 209 WXPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPG 268
Query: 294 RAIAEIKKL 302
+ I IK+L
Sbjct: 269 KQITHIKQL 277
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 8/104 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI + I PLP
Sbjct: 80 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNI 101
HM+V+KDLV DM NFY QYKSI+ PW K ++ AK I
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSIE-----PWLKRKTPASVPAKEI 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167
>gi|300120556|emb|CBK20110.2| unnamed protein product [Blastocystis hominis]
Length = 253
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 145/241 (60%), Gaps = 53/241 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------- 150
+KP YK F+I+R++ ++ D KP ++Y VD+N+
Sbjct: 14 DKPKNYKIFSIFRFDNER-DNKPHYEKYAVDMNDCGTMVLDALFKIKNEQDPTFVFRRSC 72
Query: 151 ----------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
KI ++KV + PLPH+YV+KDLV D+ NFY QY SI+
Sbjct: 73 REGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLPHLYVIKDLVADLTNFYEQYASIK 132
Query: 189 PWLQRDKENIGN---AQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
PWLQ+ K + + LQS +DR LDGLYECILCACCSTSCPSYWW+G+KYLGP++L
Sbjct: 133 PWLQK-KSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSIL 191
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
QAYRWI DSRDE T +RL L D + +YRCH IMNCT CPK LNPGR+I ++KK +
Sbjct: 192 QQAYRWIADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKKAIHK 251
Query: 306 L 306
+
Sbjct: 252 M 252
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 92/155 (59%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE DPT FRRSCREGICGSCAMNI G N LAC++KI ++KV + PLP
Sbjct: 50 MVLDALFKIKNEQDPTFVFRRSCREGICGSCAMNINGENGLACLTKIPKDNKVCTVRPLP 109
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
H+YV+KDLV D+ NFY QY SI+ L + +N++S + L A
Sbjct: 110 HLYVIKDLVADLTNFYEQYASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCA 169
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY +I YRW D DE
Sbjct: 170 CCSTSCPSYWWHGDKYLGPSILQQAYRWIADSRDE 204
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI ++KV + PLPH+YV+KDLV D+ NFY QY SI+PWL +
Sbjct: 91 ACLTKIPKDNKVCTVRPLPHLYVIKDLVADLTNFYEQYASIKPWLQK 137
>gi|219362603|ref|NP_001136531.1| uncharacterized protein LOC100216648 [Zea mays]
gi|194696050|gb|ACF82109.1| unknown [Zea mays]
gi|413941747|gb|AFW74396.1| (csu474(rpS14)), mRNA [Zea mays]
Length = 281
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 149/257 (57%), Gaps = 50/257 (19%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN---- 150
L+++ + S S++ + P K A KTF+IYRW+PD P KP +++Y+VDL++
Sbjct: 21 LSSRLVASKPHSSSPTQPPPEAKGASSTKTFSIYRWDPDSPSTKPHLRDYQVDLSDCGPM 80
Query: 151 --------------------------------------------KIDANDKVSKIYPLPH 166
KI + S + PLPH
Sbjct: 81 VLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLPH 140
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACC 225
M+V+KDLV DM NFY QYKS++PWL+R D + Q+ DR KLDG+YECILCACC
Sbjct: 141 MFVIKDLVVDMTNFYNQYKSVEPWLKRKDPPPQLGKEVPQTKADRAKLDGMYECILCACC 200
Query: 226 STSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRT 285
STSCPSYWWN E+YLGPA L+ A RWI DSRD+ T +RL+ + D F +YRCHTI NCT
Sbjct: 201 STSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLDAINDEFKLYRCHTIKNCTHA 260
Query: 286 CPKGLNPGRAIAEIKKL 302
CPKGLNP + I IKKL
Sbjct: 261 CPKGLNPAKQIDTIKKL 277
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI + S + PLP
Sbjct: 80 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKS++ PW
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVE-----PW 164
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + S + PLPHM+V+KDLV DM NFY QYKS++PWL R
Sbjct: 121 ACLTKISSASSASTVSPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKR 167
>gi|365899531|ref|ZP_09437426.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. STM 3843]
gi|365419722|emb|CCE09968.1| succinate dehydrogenase, Fe-S protein [Bradyrhizobium sp. STM 3843]
Length = 260
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 140/235 (59%), Gaps = 54/235 (22%)
Query: 118 KPA---KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KPA + + F +YRWNPD + P++ Y +D+N N ID +
Sbjct: 20 KPAGATEVREFKVYRWNPDD-GKNPSVDTYYIDVNDCGPMVLDGLIWIKNHIDPSLTFRR 78
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
D KI PLPH VVKDLVPD+ NFYAQY
Sbjct: 79 SCREGVCGSCAMNIDGQNTLACTKSMHEVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYA 138
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PWL + ++ QS +DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPA L
Sbjct: 139 SIEPWL-KTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSYWWNSQRYLGPAAL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+QA RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 198 LQATRWVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + + D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTKSMHEVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H++ D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TKSMHEV--KDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|296413423|ref|XP_002836413.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630231|emb|CAZ80604.1| unnamed protein product [Tuber melanosporum]
Length = 260
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 141/233 (60%), Gaps = 39/233 (16%)
Query: 107 SAAASSAVPAEKPAK---YKTFAIYRWNPDKPDEKPTMQEYKVD--------------LN 149
S AS VPA +K K F IYRWNPD P++KP MQ Y++D L
Sbjct: 29 SVTASQTVPAGSGSKKENIKQFQIYRWNPDTPEKKPYMQTYELDMDQTGPMVLDALIRLK 88
Query: 150 NKID------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
N++D N + S V + P FY QYKSI+P+L
Sbjct: 89 NEVDPTLTFRRSCREGICGSCAMNIQGSNTLACLCRIDVSNSAP----FYKQYKSIKPYL 144
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
QR + +Y QS+++RKKLDGLYECILCACCSTSCPSYWWN YLGPAVL+Q+YRW
Sbjct: 145 QRKTPSPDGREYRQSVEERKKLDGLYECILCACCSTSCPSYWWNSSDYLGPAVLLQSYRW 204
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+ DSRDE R + L++ S+YRCHTIMNCTRTCPKGLNPGRAIA IKK ++
Sbjct: 205 LADSRDEAKGARKSALENEMSLYRCHTIMNCTRTCPKGLNPGRAIANIKKEMA 257
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 20/86 (23%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI++KNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ +ID VS P
Sbjct: 79 MVLDALIRLKNEVDPTLTFRRSCREGICGSCAMNIQGSNTLACLCRID----VSNSAP-- 132
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
FY QYKSI+ +L
Sbjct: 133 --------------FYKQYKSIKPYL 144
>gi|319997168|gb|ADV91178.1| mitochondrial succinate dehydrogenase iron-sulphur subunit-like
protein 1 [Karlodinium micrum]
Length = 289
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/261 (46%), Positives = 148/261 (56%), Gaps = 52/261 (19%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPA--KYKTFAIYRWNPDKPDEKPTMQEYKVDL----- 148
L RS L A+S A + + FAIYR++P+K +P MQEY +DL
Sbjct: 3 LAGSAFRSMGLPRMAASVGQRSFAAATQMQKFAIYRYDPEK-SARPFMQEYDIDLKATGP 61
Query: 149 -----------------------------------NNK--------IDANDKVSKIYPLP 165
N K I+ + K +I PLP
Sbjct: 62 MILDALIKVKDEVDPTLTFRRSCREGICGSCAMNINGKNGLACLIYIEPDAKPIEIQPLP 121
Query: 166 HMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDRKKLDGLYECILCAC 224
H YVVKDLVPD+ NFY QYKSI+PWL+R +E G +Y QS +DR KLDG+YECILCA
Sbjct: 122 HSYVVKDLVPDLTNFYNQYKSIEPWLKRKEEKQAGEKEYYQSHEDRLKLDGMYECILCAS 181
Query: 225 CSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTR 284
C TSCPSYWWN E YLGPAVLMQAYRWI DSRD+ T +RL + D +YRCH IMNCT
Sbjct: 182 CMTSCPSYWWNPEYYLGPAVLMQAYRWIADSRDQYTEERLAWVNDTMKLYRCHGIMNCTN 241
Query: 285 TCPKGLNPGRAIAEIKKLLSG 305
CPKGL+P +AI E+K ++
Sbjct: 242 CCPKGLDPAKAIVELKAQVAA 262
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIK+K+E+DPTLTFRRSCREGICGSCAMNI G N LAC+ I+ + K +I PLP
Sbjct: 62 MILDALIKVKDEVDPTLTFRRSCREGICGSCAMNINGKNGLACLIYIEPDAKPIEIQPLP 121
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H YVVKDLVPD+ NFY QYKSI+ PW
Sbjct: 122 HSYVVKDLVPDLTNFYNQYKSIE-----PW 146
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L I+ + K +I PLPH YVVKDLVPD+ NFY QYKSI+PWL R
Sbjct: 103 ACLIYIEPDAKPIEIQPLPHSYVVKDLVPDLTNFYNQYKSIEPWLKR 149
>gi|148251848|ref|YP_001236433.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp.
BTAi1]
gi|146404021|gb|ABQ32527.1| succinate dehydrogenase subunit B [Bradyrhizobium sp. BTAi1]
Length = 260
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 137/230 (59%), Gaps = 51/230 (22%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+ + F +YRWNPD + P++ Y VD+N N ID +
Sbjct: 25 TEVREFKVYRWNPDD-GKNPSVDTYYVDVNDCGPMVLDGLIWIKNHIDPSLTFRRSCREG 83
Query: 156 -------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
D KI PLPH VVKDLVPD+ NFYAQY SI+PW
Sbjct: 84 VCGSCAMNIDGQNTLACTKSMHDVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPW 143
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
L + ++ QS +DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPA L+QA R
Sbjct: 144 L-KTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSYWWNSQRYLGPAALLQANR 202
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
W+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 203 WVKDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTKSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TKSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|254449931|ref|ZP_05063368.1| succinate dehydrogenase, iron-sulfur protein [Octadecabacter
arcticus 238]
gi|198264337|gb|EDY88607.1| succinate dehydrogenase, iron-sulfur protein [Octadecabacter
arcticus 238]
Length = 248
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM V+KDL+PD+ +FYAQ+ S++PWL+ K N ++ QS++DR KLDGLYEC
Sbjct: 101 KIYPLPHMPVIKDLIPDLTHFYAQHASVKPWLET-KSNKPAKEWKQSIEDRAKLDGLYEC 159
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CACC+T+CPSYWWNG+++LGPA L+ A RWI DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 160 VMCACCTTACPSYWWNGDRFLGPAALLTANRWITDSRDEATGERLDDLEDPFKLYRCHTI 219
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP AIA +KK++
Sbjct: 220 MNCAKTCPKGLNPAAAIANVKKMM 243
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+++DPTLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 47 MVLDALIKIKSDIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIKIYPLP 106
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDL+PD+ +FYAQ+ S++ PW
Sbjct: 107 HMPVIKDLIPDLTHFYAQHASVK-----PW 131
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM V+KDL+PD+ +FYAQ+ S++PWL
Sbjct: 83 GINTLACIYGMDEIKGDIKIYPLPHMPVIKDLIPDLTHFYAQHASVKPWL 132
>gi|348686856|gb|EGZ26670.1| hypothetical protein PHYSODRAFT_348795 [Phytophthora sojae]
Length = 271
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 135/233 (57%), Gaps = 50/233 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
A KP K F IYRWNP+ EKP Y VDLN
Sbjct: 28 AAKPKNLKYFKIYRWNPET-KEKPHELTYPVDLNECGPMVLDALLKIKDEQDPTLAFRRS 86
Query: 151 -----------KIDANDK-------------VSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
ID + V ++YPLPHM+VV+DLV D++NFY QY S
Sbjct: 87 CREAICGSCSMNIDGGNTLACVSPIKKSGKDVVRVYPLPHMFVVRDLVTDLSNFYDQYAS 146
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWL ++LQS++DRK+LDGLYECILCACCS +CPSYWW+ +KYLGPA L+
Sbjct: 147 IKPWLHSVMPKGVEVEHLQSIEDRKRLDGLYECILCACCSAACPSYWWSPDKYLGPAALL 206
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
QA+RWI DSRD+ T RL L D F +YRC TIMNCT TCPKGLNP +AI +I
Sbjct: 207 QAFRWIEDSRDDHTEQRLRSLDDAFKLYRCRTIMNCTHTCPKGLNPAQAIRKI 259
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 93/150 (62%), Gaps = 32/150 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLDAL+KIK+E DPTL FRRSCRE ICGSC+MNI G NTLAC+S I + K V ++YPL
Sbjct: 65 MVLDALLKIKDEQDPTLAFRRSCREAICGSCSMNIDGGNTLACVSPIKKSGKDVVRVYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNIRSFQ----------- 105
PHM+VV+DLV D++NFY QY SI+ PW + + ++++S +
Sbjct: 125 PHMFVVRDLVTDLSNFYDQYASIK-----PWLHSVMPKGVEVEHLQSIEDRKRLDGLYEC 179
Query: 106 -LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S+A P+ Y W+PDK
Sbjct: 180 ILCACCSAACPS-----------YWWSPDK 198
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
V ++YPLPHM+VV+DLV D++NFY QY SI+PWL
Sbjct: 118 VVRVYPLPHMFVVRDLVTDLSNFYDQYASIKPWL 151
>gi|388493402|gb|AFK34767.1| unknown [Medicago truncatula]
Length = 278
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 142/252 (56%), Gaps = 51/252 (20%)
Query: 101 IRSFQLSAAASSAVP-AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDAN 155
+R+ A A A P A K F IYRWNPD P KP ++E +++L +DA
Sbjct: 24 LRAHASEAQAQQASPKARDTTVLKKFQIYRWNPDTPS-KPELKECEINLKECGPMVLDAL 82
Query: 156 DKV--------------------------------------------SKIYPLPHMYVVK 171
K+ S I PLPHM+V+K
Sbjct: 83 IKIKNDIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPDAGMDSTITPLPHMFVIK 142
Query: 172 DLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYL-QSLDDRKKLDGLYECILCACCSTSCP 230
DLV DM NFY QYKSI+PWL+R + + + QS DR KLDG+YECILCACCSTSCP
Sbjct: 143 DLVVDMTNFYNQYKSIEPWLKRKSPAEEDGKEIKQSKKDRAKLDGMYECILCACCSTSCP 202
Query: 231 SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290
SYWWN E YLGPA L+ A RWI DSRDE T +RL + D F +YRCHTI+NC R CP+GL
Sbjct: 203 SYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPEGL 262
Query: 291 NPGRAIAEIKKL 302
NPG+ IA IK L
Sbjct: 263 NPGKQIAHIKSL 274
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKN++DP+LTFRRSCREGICGSCAMNI G N LAC++KI S I PLP
Sbjct: 77 MVLDALIKIKNDIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPDAGMDSTITPLP 136
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 137 HMFVIKDLVVDMTNFYNQYKSIE-----PW 161
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI S I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 118 ACLTKIPDAGMDSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 164
>gi|332285737|ref|YP_004417648.1| succinate dehydrogenase iron-sulfur subunit [Pusillimonas sp. T7-7]
gi|330429690|gb|AEC21024.1| succinate dehydrogenase iron-sulfur subunit [Pusillimonas sp. T7-7]
Length = 259
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 96/143 (67%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
+YPLPHM VVKDLV D+ + YAQY SI+PW+Q + G + LQS +DR+KLDGLYECI
Sbjct: 113 VYPLPHMPVVKDLVSDLTHLYAQYGSIKPWMQ-TQSVPGTRERLQSPEDREKLDGLYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACC+T+CPS WWN +++LGP VL+QAYRWI DSRDE T +RL+ L+DPF +YRCHTIM
Sbjct: 172 LCACCTTACPSSWWNPDRFLGPMVLLQAYRWIADSRDEATGERLDDLEDPFKLYRCHTIM 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NCT TCPKGLNP +AI+EIK+L+
Sbjct: 232 NCTNTCPKGLNPAKAISEIKQLM 254
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 93/159 (58%), Gaps = 28/159 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
MVLD L+KIKNEMDPTLT RRSCREG+CGSCAMNI G NTLAC +D + VS +YP
Sbjct: 57 MVLDVLLKIKNEMDPTLTLRRSCREGVCGSCAMNIDGENTLACTKGLDELPHGAVS-VYP 115
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTL--TAKNIRSFQ----------- 105
LPHM VVKDLV D+ + YAQY SI+ PW ++ T + ++S +
Sbjct: 116 LPHMPVVKDLVSDLTHLYAQYGSIK-----PWMQTQSVPGTRERLQSPEDREKLDGLYEC 170
Query: 106 -LSAAASSAVPAE--KPAKY----KTFAIYRWNPDKPDE 137
L A ++A P+ P ++ YRW D DE
Sbjct: 171 ILCACCTTACPSSWWNPDRFLGPMVLLQAYRWIADSRDE 209
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+YPLPHM VVKDLV D+ + YAQY SI+PW+
Sbjct: 113 VYPLPHMPVVKDLVSDLTHLYAQYGSIKPWM 143
>gi|294931455|ref|XP_002779883.1| succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983]
gi|239889601|gb|EER11678.1| succinate dehydrogenase, putative [Perkinsus marinus ATCC 50983]
Length = 280
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 152/270 (56%), Gaps = 53/270 (19%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVSK-- 160
S A+ + +TF +YR++P K D KP MQEY +DL +DA K+
Sbjct: 7 SDASRRCFATSSATRMQTFRVYRYDPLKQD-KPHMQEYNIDLAQCGPMILDALIKIKDTQ 65
Query: 161 ------------------------------------------IYPLPHMYVVKDLVPDMN 178
I PLPH YV+KDLVPD++
Sbjct: 66 DSTLAFRRSCREGICGSCAMNINGKNGLACLQYIEPGAAPIDIQPLPHTYVLKDLVPDLS 125
Query: 179 NFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
NFY QYKSI+PWL+R + + G +Y QS++DR+KLDG+YECILCACC TSCPSYWWN E
Sbjct: 126 NFYNQYKSIEPWLKRRRAKQPGEKEYYQSIEDREKLDGMYECILCACCMTSCPSYWWNPE 185
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
YLGPAVL+QAYRWI DSRDE T +R+ + D +YRCH IMNCT CPKGL+P +AIA
Sbjct: 186 YYLGPAVLLQAYRWIADSRDEFTTERMAWINDSMRLYRCHGIMNCTSCCPKGLDPAKAIA 245
Query: 298 EIKKLLSGLVKKDKPGLDTAALHKIDANDK 327
++K + +PG + AN K
Sbjct: 246 KMKAEIEAAY---EPGWTKIVAQESIANKK 272
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+ D TL FRRSCREGICGSCAMNI G N LAC+ I+ I PLP
Sbjct: 53 MILDALIKIKDTQDSTLAFRRSCREGICGSCAMNINGKNGLACLQYIEPGAAPIDIQPLP 112
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H YV+KDLVPD++NFY QYKSI+ PW
Sbjct: 113 HTYVLKDLVPDLSNFYNQYKSIE-----PW 137
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L I+ I PLPH YV+KDLVPD++NFY QYKSI+PWL R
Sbjct: 94 ACLQYIEPGAAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSIEPWLKR 140
>gi|407772358|ref|ZP_11119660.1| succinate dehydrogenase iron-sulfur protein [Thalassospira
profundimaris WP0211]
gi|407284311|gb|EKF09827.1| succinate dehydrogenase iron-sulfur protein [Thalassospira
profundimaris WP0211]
Length = 260
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 118/145 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDLVPD++ YAQ SI+PWL+ D + + LQS ++R KLDGL+EC
Sbjct: 112 KIYPLPHMPVVKDLVPDLSQPYAQLASIEPWLKADSPTPPDGERLQSREERAKLDGLWEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILC CST+CPSYWWN ++YLGPAVL+QAYRW+ DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 172 ILCFSCSTACPSYWWNSDRYLGPAVLLQAYRWLADSRDEYTGERLDALEDPFRLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLS 304
MNCT TCPKGLNP AI EIKK+++
Sbjct: 232 MNCTNTCPKGLNPALAITEIKKMIA 256
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+ I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDATLTFRRSCREGICGSCAMNIDGRNTLACLKPIEDIKGEVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++ YAQ SI+ PW
Sbjct: 118 HMPVVKDLVPDLSQPYAQLASIE-----PW 142
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ KIYPLPHM VVKDLVPD++ YAQ SI+PWL
Sbjct: 99 ACLKPIEDIKGEVKIYPLPHMPVVKDLVPDLSQPYAQLASIEPWL 143
>gi|407768404|ref|ZP_11115783.1| succinate dehydrogenase iron-sulfur protein [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407289117|gb|EKF14594.1| succinate dehydrogenase iron-sulfur protein [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 260
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 140/230 (60%), Gaps = 49/230 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVS--------- 159
++F IYR++PD D P Y +DL+ N+IDA
Sbjct: 28 RSFKIYRYDPDSGD-NPRTDTYDIDLDKCGPMVLDALIKIKNEIDATLTFRRSCREGICG 86
Query: 160 -------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
KIYPLPHM VVKDLVPD++ YAQ SI+PWL+ D
Sbjct: 87 SCAMNIDGRNTLACLKPIEDIKGEVKIYPLPHMPVVKDLVPDLSQPYAQLASIEPWLKAD 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ + LQS ++R KLDGL+ECILC CST+CPSYWWN ++YLGPAVL+QAYRW+ D
Sbjct: 147 SPTPPDGERLQSREERAKLDGLWECILCFSCSTACPSYWWNSDRYLGPAVLLQAYRWLAD 206
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
SRDE T +RL+ L+DPF +YRCHTIMNCT TCPKGLNP AI EIKK+++
Sbjct: 207 SRDEYTGERLDALEDPFRLYRCHTIMNCTNTCPKGLNPALAITEIKKMIA 256
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+ I+ KIYPLP
Sbjct: 58 MVLDALIKIKNEIDATLTFRRSCREGICGSCAMNIDGRNTLACLKPIEDIKGEVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD++ YAQ SI+ PW
Sbjct: 118 HMPVVKDLVPDLSQPYAQLASIE-----PW 142
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ KIYPLPHM VVKDLVPD++ YAQ SI+PWL
Sbjct: 99 ACLKPIEDIKGEVKIYPLPHMPVVKDLVPDLSQPYAQLASIEPWL 143
>gi|83592541|ref|YP_426293.1| succinate dehydrogenase iron-sulfur subunit [Rhodospirillum rubrum
ATCC 11170]
gi|386349267|ref|YP_006047515.1| succinate dehydrogenase iron-sulfur subunit [Rhodospirillum rubrum
F11]
gi|83575455|gb|ABC22006.1| succinate dehydrogenase subunit B [Rhodospirillum rubrum ATCC
11170]
gi|346717703|gb|AEO47718.1| succinate dehydrogenase iron-sulfur subunit [Rhodospirillum rubrum
F11]
Length = 260
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 142/228 (62%), Gaps = 49/228 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------ 150
+ K F IYRW+P++ P + +++DL++
Sbjct: 26 RLKRFKIYRWDPEE-GGNPRLDTFQIDLDDCGPMVLDALNKIKNEIDPTLTYRRSCREGI 84
Query: 151 ------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
ID+N+ ++ +IYPLPH+ VVKDLVPD+ + YAQY +I+PWL+
Sbjct: 85 CGSCSMNIDSNNSLACLKPIAEVEGDVEIYPLPHLPVVKDLVPDLTHIYAQYNAIEPWLK 144
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D + LQS ++R +LDGL+ECILC CC TSCPSYWWN E+YLGPA+L+QA RW+
Sbjct: 145 TDSPPPPAKERLQSPEERARLDGLWECILCFCCQTSCPSYWWNSERYLGPAILLQAARWV 204
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
DSRDE T +RL+ L DPF ++RCHTIMNCT TCPKGLNPG+AIA++K
Sbjct: 205 FDSRDEATGERLDMLDDPFRLFRCHTIMNCTATCPKGLNPGKAIADLK 252
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE+DPTLT+RRSCREGICGSC+MNI N+LAC+ I + +IYPLP
Sbjct: 58 MVLDALNKIKNEIDPTLTYRRSCREGICGSCSMNIDSNNSLACLKPIAEVEGDVEIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H+ VVKDLVPD+ + YAQY +I+ PW
Sbjct: 118 HLPVVKDLVPDLTHIYAQYNAIE-----PW 142
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ E+ P + ++ +D D LN++K DP YR R+C +
Sbjct: 33 YRWDPEEGGNPR--LDTFQIDLDDCGPMVLDALNKIKNEIDPTLTYR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ G I S A L I + +IYPLPH+ VVKDLVPD+
Sbjct: 83 GIC-GSCSMNIDSNNS-----------LACLKPIAEVEGDVEIYPLPHLPVVKDLVPDLT 130
Query: 349 NFYAQYKSIQPWL 361
+ YAQY +I+PWL
Sbjct: 131 HIYAQYNAIEPWL 143
>gi|294868120|ref|XP_002765391.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus
marinus ATCC 50983]
gi|239865410|gb|EEQ98108.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus
marinus ATCC 50983]
Length = 280
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 154/274 (56%), Gaps = 53/274 (19%)
Query: 103 SFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKV 158
S S A+ + + +TF +YR++P K D KP MQE+ +DL +DA K+
Sbjct: 3 SHLCSDASRRCLATSSATRMQTFRVYRYDPLKQD-KPHMQEFNIDLAQCGPMILDALIKI 61
Query: 159 SK--------------------------------------------IYPLPHMYVVKDLV 174
I PLPH YV+KDLV
Sbjct: 62 KDTQDSTLAFRRSCREGICGSCAMNINGKNGLACLQYIEPGAAPIDIQPLPHTYVLKDLV 121
Query: 175 PDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
PD++NFY QYKSI+PWL+R + + G +Y QS++DR+KLDG+YECILCACC TSCPSYW
Sbjct: 122 PDLSNFYNQYKSIEPWLKRRRAKQPGEKEYYQSIEDREKLDGMYECILCACCMTSCPSYW 181
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WN E YLGPAVL+QAYRWI DSRDE T +R+ + D +YRCH IMNCT CPKGL+P
Sbjct: 182 WNPEYYLGPAVLLQAYRWIADSRDEFTTERMAWINDSMRLYRCHGIMNCTSCCPKGLDPA 241
Query: 294 RAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDK 327
+AIA++K + +PG + AN K
Sbjct: 242 KAIAKMKAEIEAAY---EPGWTKIVAQESIANKK 272
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+ D TL FRRSCREGICGSCAMNI G N LAC+ I+ I PLP
Sbjct: 53 MILDALIKIKDTQDSTLAFRRSCREGICGSCAMNINGKNGLACLQYIEPGAAPIDIQPLP 112
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H YV+KDLVPD++NFY QYKSI+ PW
Sbjct: 113 HTYVLKDLVPDLSNFYNQYKSIE-----PW 137
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L I+ I PLPH YV+KDLVPD++NFY QYKSI+PWL R
Sbjct: 94 ACLQYIEPGAAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSIEPWLKR 140
>gi|300176488|emb|CBK24153.2| unnamed protein product [Blastocystis hominis]
Length = 277
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 137/235 (58%), Gaps = 51/235 (21%)
Query: 122 YKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------- 150
YK F ++R+ P+K D KP M+ Y VD+++
Sbjct: 43 YKLFDVFRYTPNK-DRKPHMERYAVDVSDCGTMVLDALFQIKNQIDPTFSFRRSCREGIC 101
Query: 151 -----------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KI + PLPHM+V+KDL+PDM NFY QY SI+PWLQ+
Sbjct: 102 GSCAMNINGENGLACLTKITPGSDTMTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQK 161
Query: 194 DKENIGN--AQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ + LQS +DR LDGLYECILCACCSTSCPSYWW+G+KYLGP++L QAYRW
Sbjct: 162 KSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSILQQAYRW 221
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
I DSRDE T +RL L D + +YRCH IMNCT CPK LNPGR+I ++KK + +
Sbjct: 222 IADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKKAIHHM 276
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 91/155 (58%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL +IKN++DPT +FRRSCREGICGSCAMNI G N LAC++KI + PLP
Sbjct: 74 MVLDALFQIKNQIDPTFSFRRSCREGICGSCAMNINGENGLACLTKITPGSDTMTVRPLP 133
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM+V+KDL+PDM NFY QY SI+ L + +N++S + L A
Sbjct: 134 HMFVIKDLIPDMTNFYEQYASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCA 193
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY +I YRW D DE
Sbjct: 194 CCSTSCPSYWWHGDKYLGPSILQQAYRWIADSRDE 228
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 250 RWIIDSRDEKTA--DRLNQLK---DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
R+ +D D T D L Q+K DP +R R+C +G+ A+ +
Sbjct: 63 RYAVDVSDCGTMVLDALFQIKNQIDPTFSFR--------RSCREGICGSCAMNINGENGL 114
Query: 305 GLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+ K PG DT + PLPHM+V+KDL+PDM NFY QY SI+PWL +
Sbjct: 115 ACLTKITPGSDTMT------------VRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQK 161
>gi|313768500|ref|YP_004062176.1| sdhB gene product (mitochondrion) [Gracilariophila oryzoides]
gi|312844627|gb|ADR03192.1| SdhB (mitochondrion) [Gracilariophila oryzoides]
Length = 250
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 122/153 (79%), Gaps = 1/153 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
++ + IYPLPHMYV+KDL+PD+ +FYAQYK I+PWL +K+N+ +YLQS +DR
Sbjct: 97 LNTREMFITIYPLPHMYVIKDLIPDLTHFYAQYKMIKPWLI-NKKNLPTKEYLQSTNDRY 155
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+GLYECILCACCS SCPSYWWN +KYLGPA+L+QAYRWI+DSRD T RLN L
Sbjct: 156 ELNGLYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWIVDSRDAFTNKRLNFLNHKM 215
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
++RCHTIMNC++TCPK LNPG+AIA IK +S
Sbjct: 216 RLFRCHTIMNCSKTCPKSLNPGKAIALIKYKIS 248
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 71/92 (77%), Gaps = 5/92 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI+IK+ D TLTFRRSCREGICGSC+MNI G NTLAC+ ++ + IYPLP
Sbjct: 51 MVLDALIQIKDTQDSTLTFRRSCREGICGSCSMNINGTNTLACLKSLNTREMFITIYPLP 110
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
HMYV+KDL+PD+ +FYAQYK I+ PW I
Sbjct: 111 HMYVIKDLIPDLTHFYAQYKMIK-----PWLI 137
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G +T A L ++ + IYPLPHMYV+KDL+PD+ +FYAQYK I+PWL
Sbjct: 77 ICGSCSMNINGTNTLACLKSLNTREMFITIYPLPHMYVIKDLIPDLTHFYAQYKMIKPWL 136
>gi|440803433|gb|ELR24335.1| succinate dehydrogenase and fumarate reductase ironsulfur protein
[Acanthamoeba castellanii str. Neff]
Length = 294
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 152/254 (59%), Gaps = 60/254 (23%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------- 150
F + +AA VP + T +YRW+ D+ EKP +Q YK+D+NN
Sbjct: 29 FGIVSAADKVVPKDG---LVTVEVYRWSADE-KEKPYIQSYKLDVNNCAPMVLDALLKIK 84
Query: 151 -----------------------KIDANDKVS--------------KIYPLPHMYVVKDL 173
ID + ++ KIYPLPH+ VV+DL
Sbjct: 85 NEQDPTLSFRRSCREGICGSCAMNIDGTNTLACLKPVAESVTNGKIKIYPLPHLPVVRDL 144
Query: 174 VPDMNNFYAQYKSIQPWLQ-RDKENIGNA--QYLQSLDDRKKLDGLYECILCACCSTSCP 230
VPD++NFY Q+KSIQP+LQ D +G++ + LQ+ +DRKKLDGLYECILCACCSTSCP
Sbjct: 145 VPDLSNFYEQHKSIQPYLQVDDHAALGSSKTEQLQTREDRKKLDGLYECILCACCSTSCP 204
Query: 231 SYWWNG--EKYLGPAVLMQAYRWIIDSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTCP 287
SYWW G KYLGPA+L+QAYRWI DSRD+ T RL L K+ VY CHTIMNCT+ CP
Sbjct: 205 SYWWAGNENKYLGPAILLQAYRWIADSRDQHTNQRLRALAKEDMKVYACHTIMNCTKVCP 264
Query: 288 KGLNPGRAIAEIKK 301
KGLNP A+A++KK
Sbjct: 265 KGLNPALAVAKVKK 278
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 99/161 (61%), Gaps = 25/161 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID---ANDKVSKIY 57
MVLDAL+KIKNE DPTL+FRRSCREGICGSCAMNI G NTLAC+ + N K+ KIY
Sbjct: 75 MVLDALLKIKNEQDPTLSFRRSCREGICGSCAMNIDGTNTLACLKPVAESVTNGKI-KIY 133
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLG-GPWKILGTLTAKNIRSFQ----------- 105
PLPH+ VV+DLVPD++NFY Q+KSIQ +L LG+ + +++ +
Sbjct: 134 PLPHLPVVRDLVPDLSNFYEQHKSIQPYLQVDDHAALGSSKTEQLQTREDRKKLDGLYEC 193
Query: 106 -LSAAASSAVP----AEKPAKYKTFAI----YRWNPDKPDE 137
L A S++ P A KY AI YRW D D+
Sbjct: 194 ILCACCSTSCPSYWWAGNENKYLGPAILLQAYRWIADSRDQ 234
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 31/137 (22%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ ++ P + Q+Y+ +++ D L ++K DP +R R+C +
Sbjct: 50 YRWSADEKEKPYI--QSYKLDVNNCAPMVLDALLKIKNEQDPTLSFR--------RSCRE 99
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDA----NDKVSKIYPLPHMYVVKDLV 344
G+ G + G +T A K A N K+ KIYPLPH+ VV+DLV
Sbjct: 100 GI-------------CGSCAMNIDGTNTLACLKPVAESVTNGKI-KIYPLPHLPVVRDLV 145
Query: 345 PDMNNFYAQYKSIQPWL 361
PD++NFY Q+KSIQP+L
Sbjct: 146 PDLSNFYEQHKSIQPYL 162
>gi|209967181|ref|YP_002300096.1| succinate dehydrogenase iron-sulfur protein [Rhodospirillum
centenum SW]
gi|209960647|gb|ACJ01284.1| succinate dehydrogenase iron-sulfur protein [Rhodospirillum
centenum SW]
Length = 260
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 122/144 (84%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPH VVKDLVPD++ YAQ S++PWLQ + + + LQS ++R+KL+GLYEC
Sbjct: 113 KIYPLPHQPVVKDLVPDLSQNYAQLASVKPWLQ-TQSPAPSRERLQSPEEREKLNGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILC CC+T+CPSYWWNG++YLGPAVL+QAYR+I DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 172 ILCFCCTTACPSYWWNGDRYLGPAVLLQAYRFIADSRDEMTGERLDNLEDPFRLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
M+CT+TCPKGLNP +AIAEIKKLL
Sbjct: 232 MSCTQTCPKGLNPAKAIAEIKKLL 255
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ ID KIYPLP
Sbjct: 59 MVLDALNHIKNDVDSTLTFRRSCREGICGSCAMNIDGRNTLACLKPIDEVKGDVKIYPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H VVKDLVPD++ YAQ S++ PW
Sbjct: 119 HQPVVKDLVPDLSQNYAQLASVK-----PW 143
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L ID KIYPLPH VVKDLVPD++ YAQ S++PWL
Sbjct: 100 ACLKPIDEVKGDVKIYPLPHQPVVKDLVPDLSQNYAQLASVKPWL 144
>gi|329114749|ref|ZP_08243506.1| Succinate dehydrogenase iron-sulfur subunit [Acetobacter pomorum
DM001]
gi|326695880|gb|EGE47564.1| Succinate dehydrogenase iron-sulfur subunit [Acetobacter pomorum
DM001]
Length = 260
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 145/245 (59%), Gaps = 50/245 (20%)
Query: 107 SAAASSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
+ PA AK +TF IYRW PD D+ P + Y++DL+
Sbjct: 11 TIGKGKTFPAPAGAKNVRTFRIYRWTPDD-DKNPVIDSYELDLDTIGPMVLDAIIHIKNE 69
Query: 151 ---------------------KIDANDKVS------------KIYPLPHMYVVKDLVPDM 177
ID + ++ +IYPLPHM +VKDLV ++
Sbjct: 70 VDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLPHMPIVKDLVSNL 129
Query: 178 NNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
+ YAQ +SIQPW+Q D +++ QS+++R KLDG++ECILC CC+TSCPSYWWNG+
Sbjct: 130 DGAYAQLRSIQPWMQADSAPPPDSERKQSIEERAKLDGMWECILCFCCTTSCPSYWWNGD 189
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
KYLGPAVL+ AYRWI DSRDE T DRL+ L+D F +Y C TIMNCT+TCPKGLNP +AI
Sbjct: 190 KYLGPAVLLAAYRWIADSRDEHTGDRLDGLEDTFKLYACRTIMNCTQTCPKGLNPAKAIG 249
Query: 298 EIKKL 302
IK+L
Sbjct: 250 RIKEL 254
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+I IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I +IYPLP
Sbjct: 58 MVLDAIIHIKNEVDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM +VKDLV +++ YAQ +SIQ PW
Sbjct: 118 HMPIVKDLVSNLDGAYAQLRSIQ-----PW 142
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+IYPLPHM +VKDLV +++ YAQ +SIQPW+
Sbjct: 112 RIYPLPHMPIVKDLVSNLDGAYAQLRSIQPWM 143
>gi|359788595|ref|ZP_09291568.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359255596|gb|EHK58501.1| succinate dehydrogenase iron-sulfur subunit [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 259
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 142/235 (60%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------- 155
E + + IYRW+PD E P + Y VDL+ N+ID
Sbjct: 22 EGAINLREYRIYRWSPDD-GENPRLDTYFVDLDDCGPMVLDALLWIKNRIDPTLTLRRSC 80
Query: 156 ------------------------DKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
D +S K+YPLPHM VVKDLVPD+ YAQ SI
Sbjct: 81 REGICGSCAMNIDGGNTLACTKGMDDISGAVKVYPLPHMPVVKDLVPDLTVPYAQLTSID 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
P+L+ ++ QS +DR+KLDGLYECILC CC TSCPSYWWNGE+YLGPAVL+QA
Sbjct: 141 PFLKTVSPEPAK-EWPQSYEDRQKLDGLYECILCFCCQTSCPSYWWNGERYLGPAVLLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE +RL+ L+DPF +YRCHTIMNCT+ CPKGLNP +AIAEIKK++
Sbjct: 200 YRWLIDSRDEAAGERLDNLEDPFRLYRCHTIMNCTQACPKGLNPAKAIAEIKKMM 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 63/86 (73%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +DPTLT RRSCREGICGSCAMNI G NTLAC +D K+YPLP
Sbjct: 58 MVLDALLWIKNRIDPTLTLRRSCREGICGSCAMNIDGGNTLACTKGMDDISGAVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ YAQ SI L
Sbjct: 118 HMPVVKDLVPDLTVPYAQLTSIDPFL 143
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A +D K+YPLPHM VVKDLVPD+ YAQ SI P+L
Sbjct: 95 GNTLACTKGMDDISGAVKVYPLPHMPVVKDLVPDLTVPYAQLTSIDPFL 143
>gi|383768595|ref|YP_005447658.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp.
S23321]
gi|381356716|dbj|BAL73546.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp.
S23321]
Length = 260
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 135/227 (59%), Gaps = 51/227 (22%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F +YRWNPD + P++ Y VD N N ID +
Sbjct: 28 REFRVYRWNPDD-GKNPSVDTYYVDTNDCGPMVLDGLIWIKNHIDPSLTFRRSCREGVCG 86
Query: 156 ----------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
D KI PLPH VVKDLVPD+ NFYAQY SI+PWL +
Sbjct: 87 SCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL-K 145
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
++ QS +DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPA L+QA RW+
Sbjct: 146 TTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSYWWNSDRYLGPAALLQANRWVS 205
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 206 DSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|258541138|ref|YP_003186571.1| succinate dehydrogenase iron-sulfur subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384041059|ref|YP_005479803.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384049574|ref|YP_005476637.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384052684|ref|YP_005485778.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384055916|ref|YP_005488583.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384058557|ref|YP_005497685.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384061851|ref|YP_005482493.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384117927|ref|YP_005500551.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|421850113|ref|ZP_16283081.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus NBRC 101655]
gi|421852728|ref|ZP_16285413.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256632216|dbj|BAH98191.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256635273|dbj|BAI01242.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256638328|dbj|BAI04290.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256641382|dbj|BAI07337.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256644437|dbj|BAI10385.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256647492|dbj|BAI13433.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256650545|dbj|BAI16479.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653536|dbj|BAI19463.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|371459109|dbj|GAB28284.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371479059|dbj|GAB30616.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 260
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 145/245 (59%), Gaps = 50/245 (20%)
Query: 107 SAAASSAVPAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
+ PA AK +TF IYRW PD D+ P + Y++DL+
Sbjct: 11 TIGKGKTFPAPAGAKNVRTFRIYRWTPDD-DKNPVIDSYELDLDTIGPMVLDAIIHIKNE 69
Query: 151 ---------------------KIDANDKVS------------KIYPLPHMYVVKDLVPDM 177
ID + ++ +IYPLPHM +VKDLV ++
Sbjct: 70 IDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLPHMPIVKDLVSNL 129
Query: 178 NNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGE 237
+ YAQ +SIQPW+Q D +++ QS+++R KLDG++ECILC CC+TSCPSYWWNG+
Sbjct: 130 DGAYAQLRSIQPWMQADSAPPPDSERKQSIEERAKLDGMWECILCFCCTTSCPSYWWNGD 189
Query: 238 KYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIA 297
KYLGPAVL+ AYRWI DSRDE T DRL+ L+D F +Y C TIMNCT+TCPKGLNP +AI
Sbjct: 190 KYLGPAVLLAAYRWIADSRDEHTGDRLDGLEDTFKLYACRTIMNCTQTCPKGLNPAKAIG 249
Query: 298 EIKKL 302
IK+L
Sbjct: 250 RIKEL 254
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+I IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I +IYPLP
Sbjct: 58 MVLDAIIHIKNEIDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM +VKDLV +++ YAQ +SIQ PW
Sbjct: 118 HMPIVKDLVSNLDGAYAQLRSIQ-----PW 142
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+IYPLPHM +VKDLV +++ YAQ +SIQPW+
Sbjct: 112 RIYPLPHMPIVKDLVSNLDGAYAQLRSIQPWM 143
>gi|398823696|ref|ZP_10582051.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. YR681]
gi|398225625|gb|EJN11892.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. YR681]
Length = 260
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 139/235 (59%), Gaps = 54/235 (22%)
Query: 118 KPA---KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----- 155
KPA + + F +YRWNPD + P++ Y VD N N ID +
Sbjct: 20 KPAGATETREFRVYRWNPDD-GKNPSVDTYYVDTNDCGPMVLDGLIWIKNHIDPSLTFRR 78
Query: 156 ------------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 185
D KI PLPH VVKDLVPD+ NFYAQY
Sbjct: 79 SCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYA 138
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
S++PWL + ++ QS +DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPA L
Sbjct: 139 SVEPWL-KTTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSYWWNSDRYLGPAAL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+QA RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 198 LQANRWVSDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNHIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY S++ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASVE-----PW 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY S++PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASVEPWL 144
>gi|115474559|ref|NP_001060876.1| Os08g0120000 [Oryza sativa Japonica Group]
gi|5688947|dbj|BAA82749.1| succinate dehydrogenase iron-protein subunit (SDHB) [Oryza sativa
Japonica Group]
gi|5688949|dbj|BAA82750.1| succinate dehydrogenase iron-protein subunit [Oryza sativa Japonica
Group]
gi|42407915|dbj|BAD09055.1| succinate dehydrogenase iron-protein subunit (SDHB) [Oryza sativa
Japonica Group]
gi|113622845|dbj|BAF22790.1| Os08g0120000 [Oryza sativa Japonica Group]
gi|215737455|dbj|BAG96585.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737456|dbj|BAG96586.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765447|dbj|BAG87144.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 281
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 139/232 (59%), Gaps = 49/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
A KTF+IYRW+PD P KP +++YKVDL++
Sbjct: 46 ANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREG 105
Query: 151 -------KIDANDKVSKI------------YPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
ID ++ ++ + PLPHM+V+KDLV DM NFY QYKS++PWL
Sbjct: 106 ICGSCAMNIDGDNGLACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWL 165
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
+R D + Q+ DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A R
Sbjct: 166 KRKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANR 225
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
WI DSRD+ T +RL+ + D F +YRCHTI NCT CPKGLNP + I IKKL
Sbjct: 226 WIQDSRDQFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKL 277
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 70/90 (77%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI + S I PLP
Sbjct: 80 MVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTISPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKS++ PW
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSVE-----PW 164
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + S I PLPHM+V+KDLV DM NFY QYKS++PWL R
Sbjct: 121 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKR 167
>gi|374571970|ref|ZP_09645066.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. WSM471]
gi|374420291|gb|EHQ99823.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. WSM471]
Length = 260
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 115/148 (77%), Gaps = 1/148 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D KI PLPH VVKDL+PD+ NFYAQY S++PWL + ++ QS +DR+K
Sbjct: 106 DVKDGAVKINPLPHQPVVKDLIPDLTNFYAQYASVEPWL-KTTSPTPQKEWKQSHEDREK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN E+YLGPA L+QA RW+ DSRDE T +RL+ L+DPF
Sbjct: 165 LDGLYECILCACCSTSCPSYWWNSERYLGPAALLQANRWVSDSRDEATGERLDNLEDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 225 LYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNNIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDL+PD+ NFYAQY S++ PW
Sbjct: 118 PHQPVVKDLIPDLTNFYAQYASVE-----PW 143
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDL+PD+ NFYAQY S++PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLIPDLTNFYAQYASVEPWL 144
>gi|384214208|ref|YP_005605371.1| succinate dehydrogenase iron-sulfur protein subunit [Bradyrhizobium
japonicum USDA 6]
gi|354953104|dbj|BAL05783.1| succinate dehydrogenase iron-sulfur protein subunit [Bradyrhizobium
japonicum USDA 6]
Length = 260
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 116/148 (78%), Gaps = 1/148 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL + + ++ QS +DR+K
Sbjct: 106 DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL-KTTSPMPQKEWRQSHEDREK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN ++YLGPA L+QA RW+ DSRDE T +RL+ L+DPF
Sbjct: 165 LDGLYECILCACCSTSCPSYWWNSDRYLGPAALLQANRWVSDSRDEATGERLDNLEDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 225 LYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNNIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|386399549|ref|ZP_10084327.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. WSM1253]
gi|385740175|gb|EIG60371.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. WSM1253]
Length = 260
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 115/148 (77%), Gaps = 1/148 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D KI PLPH VVKDL+PD+ NFYAQY S++PWL + ++ QS +DR+K
Sbjct: 106 DVKDGAVKINPLPHQPVVKDLIPDLTNFYAQYASVEPWL-KTTSPTPQKEWKQSHEDREK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN E+YLGPA L+QA RW+ DSRDE T +RL+ L+DPF
Sbjct: 165 LDGLYECILCACCSTSCPSYWWNSERYLGPAALLQANRWVSDSRDEATGERLDNLEDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 225 LYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNNIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDL+PD+ NFYAQY S++ PW
Sbjct: 118 PHQPVVKDLIPDLTNFYAQYASVE-----PW 143
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDL+PD+ NFYAQY S++PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLIPDLTNFYAQYASVEPWL 144
>gi|23014375|ref|ZP_00054195.1| COG0479: Succinate dehydrogenase/fumarate reductase, Fe-S protein
subunit [Magnetospirillum magnetotacticum MS-1]
Length = 259
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 141/230 (61%), Gaps = 49/230 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F IYR++PD + P + Y++DL+N
Sbjct: 27 KVFKIYRYDPDS-NANPRLDSYEIDLDNCGPMVLDALLKIKNEIDSTLTFRRSCREGICG 85
Query: 151 ----KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
ID + +S IYPLPHM VVKDL+PD+ YAQ S++PW+Q
Sbjct: 86 SCAMNIDGTNTLSCLKPIEDIKGDAAIYPLPHMPVVKDLIPDLTRPYAQLASVKPWMQTQ 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ + LQS ++R+KLDGL+ECILC CC TSCPSYWWNG++YLGPAVL+QA RWI+D
Sbjct: 146 TAPPPDGERLQSPEEREKLDGLWECILCFCCQTSCPSYWWNGDRYLGPAVLLQAARWILD 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+RDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI IK+ ++
Sbjct: 206 TRDEMTGERLDALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGAIKEKIA 255
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+D TLTFRRSCREGICGSCAMNI G NTL+C+ I+ + IYPLP
Sbjct: 57 MVLDALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLSCLKPIEDIKGDAAIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ YAQ S++ PW
Sbjct: 117 HMPVVKDLIPDLTRPYAQLASVK-----PW 141
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 329 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ IYPLPHM VVKDL+PD+ YAQ S++PW+
Sbjct: 110 AAIYPLPHMPVVKDLIPDLTRPYAQLASVKPWM 142
>gi|91083269|ref|XP_974251.1| PREDICTED: similar to succinate dehydrogenase complex subunit B
[Tribolium castaneum]
gi|270008235|gb|EFA04683.1| hypothetical protein TcasGA2_TC014418 [Tribolium castaneum]
Length = 295
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 159/287 (55%), Gaps = 53/287 (18%)
Query: 80 KSIQRHLGGPWKI-LGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEK 138
K I ++ GG + T +A N + Q A SA PA K + K F+IYR+ + +K
Sbjct: 6 KVILKNYGGHFGARFVTTSAHNFKQAQKKPAEKSAPPAPKSPRLKDFSIYRFTKES-KKK 64
Query: 139 PTMQEYKVDLNN----KIDANDKVS----------------------------------- 159
P MQ+Y +DLN+ +DA K+
Sbjct: 65 PHMQKYTIDLNDCGPMILDALLKIKREQDSTITFRRSCREGVCGSCAMNINGRNALACTK 124
Query: 160 --------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDR 210
KIYPLPHMYVVKDLV DM F Q+K I+P+L R+ + IG QYLQSL DR
Sbjct: 125 RIEPKGDCKIYPLPHMYVVKDLVVDMTRFLDQHKRIKPYLIRNHDVAIGQKQYLQSLKDR 184
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEK---YLGPAVLMQAYRWIIDSRDEKTADRLNQL 267
KLDG ECILCACCSTSCP YWW+G +LGPA L+ RWI DSRDE RL L
Sbjct: 185 DKLDGYIECILCACCSTSCPEYWWHGHGDNDFLGPAALLAVDRWIRDSRDEAAECRLATL 244
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGL 314
+D FSVYRCH+I NCT CPK LNP +AIA ++ L+G +K+KP +
Sbjct: 245 RDYFSVYRCHSIFNCTSCCPKHLNPAKAIAHLRMRLAGKKQKEKPEM 291
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDAL+KIK E D T+TFRRSCREG+CGSCAMNI G N LAC +I+ KIYPLP
Sbjct: 80 MILDALLKIKREQDSTITFRRSCREGVCGSCAMNINGRNALACTKRIEPKGDC-KIYPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMYVVKDLV DM F Q+K I+ +L
Sbjct: 139 HMYVVKDLVVDMTRFLDQHKRIKPYL 164
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
KIYPLPHMYVVKDLV DM F Q+K I+P+L R+
Sbjct: 133 KIYPLPHMYVVKDLVVDMTRFLDQHKRIKPYLIRN 167
>gi|300176059|emb|CBK23370.2| unnamed protein product [Blastocystis hominis]
Length = 263
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 137/236 (58%), Gaps = 54/236 (22%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+Y+ F IYR+NP + D KP M+ Y VDL+
Sbjct: 16 QYRLFEIYRFNPAR-DIKPHMERYAVDLSQCGGMVLDALFHIKDTIDPTFTFRRSCREGI 74
Query: 150 -----------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
+I K I PLPHM+V+KDLV D N Y QY SI+PWLQ
Sbjct: 75 CGSCSMNINGENGLACLTRIGKGSKTITIRPLPHMFVIKDLVIDQTNSYEQYNSIKPWLQ 134
Query: 193 RDKEN-----IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+ ++N + + LQS DR KLDGLYECILC CCSTSCPSYWWN +KYLGP VL Q
Sbjct: 135 KKQKNEPTDDLYLTENLQSPQDRAKLDGLYECILCNCCSTSCPSYWWNPDKYLGPMVLQQ 194
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI+DSRDE T +RL L D + +YRCH IMNCT +CPK LNPGR+IA IK+LL
Sbjct: 195 AYRWIVDSRDEMTEERLRDLDDVYKLYRCHAIMNCTHSCPKNLNPGRSIAHIKQLL 250
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL IK+ +DPT TFRRSCREGICGSC+MNI G N LAC+++I K I PLP
Sbjct: 48 MVLDALFHIKDTIDPTFTFRRSCREGICGSCSMNINGENGLACLTRIGKGSKTITIRPLP 107
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV D N Y QY SI+ PW
Sbjct: 108 HMFVIKDLVIDQTNSYEQYNSIK-----PW 132
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L +I K I PLPHM+V+KDLV D N Y QY SI+PWL +
Sbjct: 89 ACLTRIGKGSKTITIRPLPHMFVIKDLVIDQTNSYEQYNSIKPWLQK 135
>gi|27375626|ref|NP_767155.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium
japonicum USDA 110]
gi|3169725|gb|AAC17943.1| succinate dehydrogenase iron-sulfur protein subunit [Bradyrhizobium
japonicum]
gi|27348763|dbj|BAC45780.1| succinate dehydrogenase iron-sulfur protein subunit [Bradyrhizobium
japonicum USDA 110]
Length = 260
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 135/227 (59%), Gaps = 51/227 (22%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN------------- 155
+ F +YRWNPD + P++ Y VD N N ID +
Sbjct: 28 REFRVYRWNPDD-GKNPSVDTYYVDTNDCGPMVLDGLIWIKNNIDPSLTFRRSCREGVCG 86
Query: 156 ----------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
D KI PLPH VVKDLVPD+ NFYAQY S++PWL +
Sbjct: 87 SCAMNIDGQNTLACTRSMHDVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASVEPWL-K 145
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
++ QS +DR+KLDGLYECILCACCSTSCPSYWWN ++YLGPA L+QA RW+
Sbjct: 146 TTSPTPQKEWRQSHEDREKLDGLYECILCACCSTSCPSYWWNSDRYLGPAALLQANRWVS 205
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIAE+K
Sbjct: 206 DSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNPAEAIAELK 252
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DP+LTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNNIDPSLTFRRSCREGVCGSCAMNIDGQNTLACTRSMHDVKDGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH VVKDLVPD+ NFYAQY S++ PW
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASVE-----PW 143
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D D KI PLPH VVKDLVPD+ NFYAQY S++PWL
Sbjct: 101 TRSMH--DVKDGAVKINPLPHQPVVKDLVPDLTNFYAQYASVEPWL 144
>gi|92119078|ref|YP_578807.1| succinate dehydrogenase iron-sulfur subunit [Nitrobacter
hamburgensis X14]
gi|91801972|gb|ABE64347.1| succinate dehydrogenase subunit B [Nitrobacter hamburgensis X14]
Length = 260
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 140/236 (59%), Gaps = 51/236 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------- 150
E + + F +YRWNPD D+ P++ Y VD+N
Sbjct: 22 EGATETREFRVYRWNPDD-DKNPSIDTYYVDVNECGPRVLDGLIWIKDHIDPTLTFRRSC 80
Query: 151 ----------KIDANDK-------------VSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + V KI PLPH VVKDLVPD+ NFYAQY SI
Sbjct: 81 REGVCGSCAMNIDGQNTLACTTSMHDLAGGVVKINPLPHQPVVKDLVPDLTNFYAQYASI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWL+ ++LQS +DR+KLDGLYECILCACCST+CPSYWWN +++LGPA L+Q
Sbjct: 141 EPWLKTTTPT-PQKEWLQSHEDREKLDGLYECILCACCSTACPSYWWNSDRFLGPAALLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
A RW+ DSRDE T +RL+ L+DPF +YRCHTI+NCT+ CPK LNP AIA +K+ L
Sbjct: 200 AARWVTDSRDEATGERLDYLEDPFRLYRCHTILNCTKACPKKLNPAEAIAMLKRKL 255
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 86/148 (58%), Gaps = 31/148 (20%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPLP 60
VLD LI IK+ +DPTLTFRRSCREG+CGSCAMNI G NTLAC + + D V KI PLP
Sbjct: 59 VLDGLIWIKDHIDPTLTFRRSCREGVCGSCAMNIDGQNTLACTTSMHDLAGGVVKINPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKN--IRSFQ------------L 106
H VVKDLVPD+ NFYAQY SI+ PW T T + ++S + L
Sbjct: 119 HQPVVKDLVPDLTNFYAQYASIE-----PWLKTTTPTPQKEWLQSHEDREKLDGLYECIL 173
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S+A P+ Y WN D+
Sbjct: 174 CACCSTACPS-----------YWWNSDR 190
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D V KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TTSMH--DLAGGVVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|224080253|ref|XP_002189250.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial, partial [Taeniopygia guttata]
Length = 247
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 140/226 (61%), Gaps = 59/226 (26%)
Query: 89 PWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
P ++L +R Q +AAA + K FAIYRW+PDK +KP MQ Y+VDL
Sbjct: 31 PARLLRAGPRAVLRQAQTAAAAP---------RLKKFAIYRWDPDKAGDKPRMQTYEVDL 81
Query: 149 NN------------------------------------------------KIDAN-DKVS 159
N KID++ KV+
Sbjct: 82 NKCGPMVLDALIKIKNEMDFTLTFRRSCREGICGSCAMNIAGGNTLACIKKIDSDLSKVT 141
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYE 218
KIYPLPHMYVVKDLVPD++NFYAQYKSIQP+L++ D+ G QYLQS++DR+KLDGLYE
Sbjct: 142 KIYPLPHMYVVKDLVPDLSNFYAQYKSIQPYLKKKDESQEGKQQYLQSIEDRQKLDGLYE 201
Query: 219 CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRL 264
CILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL
Sbjct: 202 CILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERL 247
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLACI KID++ KV+KIYPL
Sbjct: 87 MVLDALIKIKNEMDFTLTFRRSCREGICGSCAMNIAGGNTLACIKKIDSDLSKVTKIYPL 146
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSIQ +L
Sbjct: 147 PHMYVVKDLVPDLSNFYAQYKSIQPYL 173
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A + KID++ KV+KIYPLPHMYVVKDLVPD++NFYAQYKSIQP+L +
Sbjct: 124 GNTLACIKKIDSDLSKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIQPYLKK 175
>gi|91974958|ref|YP_567617.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas
palustris BisB5]
gi|91681414|gb|ABE37716.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris
BisB5]
Length = 260
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 137/233 (58%), Gaps = 51/233 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID--------- 153
E + + F +YRWNPD + P++ Y VD + N ID
Sbjct: 22 EGATEVREFRVYRWNPDDGN-NPSIDTYYVDKHDCGPMVLDGLIWIKNNIDPTLTFRRSC 80
Query: 154 ----------------------ANDKVS----KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
A D V K+ PLPH VVKDLVPD+ NFYAQY SI
Sbjct: 81 REGVCGSCAMNIDGENTLACTKAMDDVRGDAVKVTPLPHQPVVKDLVPDLTNFYAQYASI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
QPWLQ ++ QS DDR+KLDGLYECILCACCSTSCPSYWWN +++LGPA L+Q
Sbjct: 141 QPWLQTVTPT-PQKEWRQSHDDREKLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
A RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIA +K
Sbjct: 200 ATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPKGLNPSEAIASLK 252
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D K+ PL
Sbjct: 58 MVLDGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRGDAVKVTPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PH VVKDLVPD+ NFYAQY SIQ PW L T+T + ++ S
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIQ-----PW--LQTVTPTPQKEWRQS 158
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D K+ PLPH VVKDLVPD+ NFYAQY SIQPWL
Sbjct: 94 GENTLACTKAMDDVRGDAVKVTPLPHQPVVKDLVPDLTNFYAQYASIQPWL 144
>gi|71032191|ref|XP_765737.1| succinate dehydrogenase iron-sulfur subunit [Theileria parva strain
Muguga]
gi|68352694|gb|EAN33454.1| succinate dehydrogenase iron-sulfur subunit, putative [Theileria
parva]
Length = 263
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 141/233 (60%), Gaps = 55/233 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID----------------- 153
F+++R+ P+ EKP MQ Y VD N N++D
Sbjct: 23 FSVFRYTPNS-KEKPRMQTYTVDTNECGPMILDALIKIKNEMDSTLTFRRSCREGICGSC 81
Query: 154 -------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
A+ +I PLP MYV+KDLVPD+ NFY QY+S++PWL+R
Sbjct: 82 AMNINGENGLACLMDIEKQASMGTVEIQPLPGMYVLKDLVPDLTNFYEQYRSVEPWLKRK 141
Query: 195 KENI----GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
+ G+ +Y QS +DR+KLDGLYECILCACCSTSCPSYWWN E YLGPA LMQAYR
Sbjct: 142 TPKVLSEEGDKEYYQSREDRQKLDGLYECILCACCSTSCPSYWWNPEHYLGPAALMQAYR 201
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
WI DSRDE T +RL ++ D +YRCH I+NCT+ CPKGL+P +I+++KKL+
Sbjct: 202 WIADSRDEYTTERLVEVNDTMKLYRCHGILNCTKVCPKGLDPAGSISKLKKLV 254
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 99/179 (55%), Gaps = 34/179 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYP 58
M+LDALIKIKNEMD TLTFRRSCREGICGSCAMNI G N LAC+ I+ A+ +I P
Sbjct: 51 MILDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGENGLACLMDIEKQASMGTVEIQP 110
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW------KILGTLTAK------------- 99
LP MYV+KDLVPD+ NFY QY+S++ PW K+L K
Sbjct: 111 LPGMYVLKDLVPDLTNFYEQYRSVE-----PWLKRKTPKVLSEEGDKEYYQSREDRQKLD 165
Query: 100 NIRSFQLSAAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
+ L A S++ P+ P Y YRW D DE T E V++N+ +
Sbjct: 166 GLYECILCACCSTSCPSYWWNPEHYLGPAALMQAYRWIADSRDEYTT--ERLVEVNDTM 222
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+I PLP MYV+KDLVPD+ NFY QY+S++PWL R
Sbjct: 107 EIQPLPGMYVLKDLVPDLTNFYEQYRSVEPWLKR 140
>gi|357616157|gb|EHJ70041.1| succinate dehydrogenase, iron-sulfur subunit [Danaus plexippus]
Length = 291
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 145/240 (60%), Gaps = 47/240 (19%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN----KIDA------------------------ 154
K F IYR+ +EKPT++ Y +D+N +DA
Sbjct: 39 KVFKIYRFGGILSNEKPTLKSYDLDINTCGRMVLDALIKIKDMDPTLVFRRSCREGICGS 98
Query: 155 ------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE 196
+DKV I+P+PHMYV++DLV DM +F+ Y S++P+L R+
Sbjct: 99 CAINLQGQNCLACITAIPSDKVITIHPIPHMYVIRDLVVDMTHFFDVYNSLRPYLIRNNS 158
Query: 197 N-IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+G QY QS D KL GLYEC+LC+CC+T+CPSYWWNG +++GPA L+ AYRWIIDS
Sbjct: 159 GALGKFQYAQSEKDNSKLVGLYECVLCSCCATACPSYWWNGRRFMGPASLLHAYRWIIDS 218
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLD 315
RDE++ RL +L+D F +RCHTI NCT CPKGL+P AIA++K+L+SGL KK P +D
Sbjct: 219 RDEESEQRLFELRDDFKAFRCHTIYNCTLACPKGLHPALAIAKLKRLISGLDKKPLPEMD 278
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK +MDPTL FRRSCREGICGSCA+N+ G N LACI+ I +DKV I+P+P
Sbjct: 70 MVLDALIKIK-DMDPTLVFRRSCREGICGSCAINLQGQNCLACITAI-PSDKVITIHPIP 127
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HMYV++DLV DM +F+ Y S++ +L
Sbjct: 128 HMYVIRDLVVDMTHFFDVYNSLRPYL 153
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 23/121 (19%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKD--PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+++Y I++ D L ++KD P V+R R+C +G+ AI
Sbjct: 57 LKSYDLDINTCGRMVLDALIKIKDMDPTLVFR--------RSCREGICGSCAI------- 101
Query: 304 SGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+ G + A +DKV I+P+PHMYV++DLV DM +F+ Y S++P+L R
Sbjct: 102 ------NLQGQNCLACITAIPSDKVITIHPIPHMYVIRDLVVDMTHFFDVYNSLRPYLIR 155
Query: 364 S 364
+
Sbjct: 156 N 156
>gi|313768526|ref|YP_004062201.1| sdhB gene product (mitochondrion) [Gracilariopsis andersonii]
gi|312844653|gb|ADR03217.1| SdhB (mitochondrion) [Gracilariopsis andersonii]
Length = 258
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
++ + IYPLPHMYV+KDL+PD+ +FYAQYK I+PWL K NI +YLQS DR
Sbjct: 97 LNTKEMFITIYPLPHMYVIKDLIPDLTHFYAQYKMIKPWLINLK-NIPVKEYLQSTSDRH 155
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+GLYECILCACCS SCPSYWWN +KYLGPA+L+QAYRWI+DSRD T +RLN L
Sbjct: 156 ELNGLYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWIVDSRDAFTNNRLNFLNHKM 215
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
++RCHTIMNC++TCPK LNPG+AIA IK +S
Sbjct: 216 RLFRCHTIMNCSKTCPKSLNPGKAIALIKYKIS 248
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 72/92 (78%), Gaps = 5/92 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI+IK+ D TLTFRRSCREGICGSC+MNI G+NTLAC+ ++ + IYPLP
Sbjct: 51 MVLDALIQIKDTQDSTLTFRRSCREGICGSCSMNINGINTLACLKSLNTKEMFITIYPLP 110
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
HMYV+KDL+PD+ +FYAQYK I+ PW I
Sbjct: 111 HMYVIKDLIPDLTHFYAQYKMIK-----PWLI 137
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G++T A L ++ + IYPLPHMYV+KDL+PD+ +FYAQYK I+PWL
Sbjct: 77 ICGSCSMNINGINTLACLKSLNTKEMFITIYPLPHMYVIKDLIPDLTHFYAQYKMIKPWL 136
>gi|307107565|gb|EFN55807.1| hypothetical protein CHLNCDRAFT_22638, partial [Chlorella
variabilis]
Length = 212
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 121/153 (79%), Gaps = 1/153 (0%)
Query: 150 NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLD 208
K+D + KVS+I PLPHM+VVKDLV DM NFYAQYK IQP+LQ K ++LQ+ +
Sbjct: 52 TKVDRDASKVSRIAPLPHMFVVKDLVVDMANFYAQYKHIQPYLQTTKPKPDGKEFLQTKE 111
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVL+ AYRWIIDSRD+ T +RL +
Sbjct: 112 DRAKLDGLYECILCACCSTSCPSYWWNSDKYLGPAVLLAAYRWIIDSRDDFTEERLRNVN 171
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
D + +YRCHTI NC+ CPKGL+P +AI +IK+
Sbjct: 172 DQWKLYRCHTIGNCSVVCPKGLSPSKAITKIKQ 204
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LD L+KIK+E D TL+ RRSCREGICGSCAMN+ G N LAC++K+D + KVS+I PL
Sbjct: 8 MMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNMDGTNGLACLTKVDRDASKVSRIAPL 67
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VVKDLV DM NFYAQYK IQ +L
Sbjct: 68 PHMFVVKDLVVDMANFYAQYKHIQPYL 94
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L K+D + KVS+I PLPHM+VVKDLV DM NFYAQYK IQP+L
Sbjct: 49 ACLTKVDRDASKVSRIAPLPHMFVVKDLVVDMANFYAQYKHIQPYL 94
>gi|39933293|ref|NP_945569.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas
palustris CGA009]
gi|192288646|ref|YP_001989251.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas
palustris TIE-1]
gi|39652918|emb|CAE25660.1| succinate dehydrogenase iron-sulfur protein subunit
[Rhodopseudomonas palustris CGA009]
gi|192282395|gb|ACE98775.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodopseudomonas palustris TIE-1]
Length = 260
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 134/233 (57%), Gaps = 51/233 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID--------- 153
E + + F +YRWNPD + P++ Y VD + N ID
Sbjct: 22 EGATEVREFRVYRWNPDD-GKNPSVDTYYVDKHDCGPMVLDGLIWIKNNIDPTLTFRRSC 80
Query: 154 --------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D KI PLPH VVKDLVPD+ NFYAQY SI
Sbjct: 81 REGVCGSCAMNIDGENTLACTKAMDDVRDDAVKINPLPHQPVVKDLVPDLTNFYAQYASI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
QPWLQ ++ QS DR+KLDGLYECILCACCSTSCPSYWWN +++LGPA L+Q
Sbjct: 141 QPWLQTVTPT-PQKEWRQSHSDREKLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
A RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIA +K
Sbjct: 200 ATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPKGLNPSEAIANLK 252
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRDDAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PH VVKDLVPD+ NFYAQY SIQ PW L T+T + ++ S
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIQ-----PW--LQTVTPTPQKEWRQS 158
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D D KI PLPH VVKDLVPD+ NFYAQY SIQPWL
Sbjct: 94 GENTLACTKAMDDVRDDAVKINPLPHQPVVKDLVPDLTNFYAQYASIQPWL 144
>gi|89573809|gb|ABD77130.1| succinate dehydrogenase complex subunit B [Loxodonta africana]
Length = 213
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 136/213 (63%), Gaps = 50/213 (23%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NK 151
L A + A + K FAIYRW+PDK +KP MQ Y++DLN N+
Sbjct: 1 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNE 60
Query: 152 IDAN-----------------------------------DKVSKIYPLPHMYVVKDLVPD 176
ID+ KVSKIYPLPHMYV+KDLVPD
Sbjct: 61 IDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPD 120
Query: 177 MNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
++NFYAQYKSI+P+L++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWN
Sbjct: 121 LSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWN 180
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
G+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 181 GDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 213
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 49 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 108
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 109 PHMYVIKDLVPDLSNFYAQYKSIEPYL 135
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 86 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 137
>gi|162147198|ref|YP_001601659.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209544251|ref|YP_002276480.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785775|emb|CAP55346.1| Succinate dehydrogenase iron-sulfur protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531928|gb|ACI51865.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Gluconacetobacter diazotrophicus PAl 5]
Length = 260
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 143/240 (59%), Gaps = 53/240 (22%)
Query: 112 SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKID---- 153
+A P K K F +YRWNPD P + Y++DL+ N +D
Sbjct: 19 TAAPGAK--NVKPFRVYRWNPDD-GANPVVDTYEIDLDTIGPMVLDALIHIKNNVDPTLT 75
Query: 154 -------------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYA 182
+D VS IYPLPHM VVKDLVPD+N YA
Sbjct: 76 FRRSCREGICGSCAMNIDGENTLACLKPIKDVHDAVS-IYPLPHMPVVKDLVPDLNGAYA 134
Query: 183 QYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
Q +SI+PWL+ D +++ QS+++R +LDG++ECILC CC+TSCPSYWWNG++YLGP
Sbjct: 135 QLRSIEPWLKSDTAPPPDSERRQSIEERAELDGMWECILCFCCTTSCPSYWWNGDRYLGP 194
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
A L+ AYRWI DSRDE +RL+ L+DP +Y C TIMNCT+TCPKGLNP +AIA IK+L
Sbjct: 195 ATLLAAYRWIADSRDEHAGERLDALEDPLKLYACRTIMNCTQTCPKGLNPAKAIARIKEL 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 72/91 (79%), Gaps = 7/91 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALI IKN +DPTLTFRRSCREGICGSCAMNI G NTLAC+ I D +D VS IYPL
Sbjct: 58 MVLDALIHIKNNVDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDVHDAVS-IYPL 116
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM VVKDLVPD+N YAQ +SI+ PW
Sbjct: 117 PHMPVVKDLVPDLNGAYAQLRSIE-----PW 142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 63/135 (46%), Gaps = 29/135 (21%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y WN + P V Y +D+ D L +K DP +R R+C +
Sbjct: 33 YRWNPDDGANPVV--DTYEIDLDTIGPMVLDALIHIKNNVDPTLTFR--------RSCRE 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A K D +D VS IYPLPHM VVKDLVPD
Sbjct: 83 GI-------------CGSCAMNIDGENTLACLKPIKDVHDAVS-IYPLPHMPVVKDLVPD 128
Query: 347 MNNFYAQYKSIQPWL 361
+N YAQ +SI+PWL
Sbjct: 129 LNGAYAQLRSIEPWL 143
>gi|316931812|ref|YP_004106794.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodopseudomonas palustris DX-1]
gi|315599526|gb|ADU42061.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rhodopseudomonas palustris DX-1]
Length = 260
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 134/233 (57%), Gaps = 51/233 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID--------- 153
E + + F +YRWNPD + P++ Y VD + N ID
Sbjct: 22 EGATEVREFRVYRWNPDD-GKNPSVDTYYVDKHDCGPMVLDGLIWIKNNIDPTLTFRRSC 80
Query: 154 --------------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
D K+ PLPH VVKDLVPD+ NFYAQY SI
Sbjct: 81 REGVCGSCAMNIDGENTLACTKAMDDVRDDAVKVSPLPHQPVVKDLVPDLTNFYAQYASI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
QPWLQ ++ QS DR+KLDGLYECILCACCSTSCPSYWWN +++LGPA L+Q
Sbjct: 141 QPWLQTVTPT-PQKEWRQSHSDREKLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQ 199
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
A RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIA +K
Sbjct: 200 ATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPKGLNPSEAIANLK 252
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D D K+ PL
Sbjct: 58 MVLDGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRDDAVKVSPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PH VVKDLVPD+ NFYAQY SIQ PW L T+T + ++ S
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIQ-----PW--LQTVTPTPQKEWRQS 158
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D D K+ PLPH VVKDLVPD+ NFYAQY SIQPWL
Sbjct: 94 GENTLACTKAMDDVRDDAVKVSPLPHQPVVKDLVPDLTNFYAQYASIQPWL 144
>gi|386800400|ref|YP_006280864.1| sdh2 gene product (mitochondrion) [Pyropia yezoensis]
gi|384034959|gb|AFH57670.1| succinate:cytochrome c oxidoreductase subunit 2 (mitochondrion)
[Pyropia yezoensis]
Length = 248
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/154 (62%), Positives = 119/154 (77%), Gaps = 2/154 (1%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
++ N + IYPLPHMY++KDLVPD++NFYAQYK I+PWL + +YLQS DR
Sbjct: 96 LNINTRTITIYPLPHMYIIKDLVPDLSNFYAQYKYIKPWLINNTP--SKTEYLQSEKDRS 153
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+G+YECILCACCS SCPSYWWN +KYLGPA+L+QAYRW+ DSRD KT DRL L
Sbjct: 154 ELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWLADSRDIKTQDRLALLGGKS 213
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
+++CHTIMNC+RTCPK LNPG+AIA IK +S
Sbjct: 214 KLFKCHTIMNCSRTCPKSLNPGKAIASIKHSISN 247
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 5/95 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIK+E D ++ FRRSCREGICGSC+MNI G NTLAC+ ++ N + IYPLP
Sbjct: 50 MVLDALIKIKDEQDSSIAFRRSCREGICGSCSMNINGTNTLACLQPLNINTRTITIYPLP 109
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGT 95
HMY++KDLVPD++NFYAQYK I+ PW I T
Sbjct: 110 HMYIIKDLVPDLSNFYAQYKYIK-----PWLINNT 139
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G +T A L ++ N + IYPLPHMY++KDLVPD++NFYAQYK I+PWL
Sbjct: 76 ICGSCSMNINGTNTLACLQPLNINTRTITIYPLPHMYIIKDLVPDLSNFYAQYKYIKPWL 135
>gi|88812339|ref|ZP_01127589.1| succinate dehydrogenase catalytic subunit [Nitrococcus mobilis
Nb-231]
gi|88790346|gb|EAR21463.1| succinate dehydrogenase catalytic subunit [Nitrococcus mobilis
Nb-231]
Length = 259
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 116/152 (76%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
ID + ++YPLP + V+KDLVPDM +FYAQY SI+PWLQ N + LQS +DR
Sbjct: 104 IDGIEGEIRVYPLPSLPVIKDLVPDMTHFYAQYASIKPWLQAKTPTPPNRERLQSREDRA 163
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACC+T CPS+WWN ++YLGPAVL+QA RW+ DSRDE T +RL+ L+D F
Sbjct: 164 KLDGLYECILCACCTTGCPSWWWNSKRYLGPAVLLQAQRWLADSRDEATGERLDDLEDSF 223
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTIMNC CPKGLNP +AIA IK L
Sbjct: 224 KLYRCHTIMNCVEVCPKGLNPAQAIARIKGRL 255
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TLTFRRSCREG+CGSCAMNI G NTLAC ID + ++YPLP
Sbjct: 58 MVLDALIKIKNELDSTLTFRRSCREGVCGSCAMNIAGRNTLACTKPIDGIEGEIRVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ 105
+ V+KDLVPDM +FYAQY SI+ PW T T N Q
Sbjct: 118 SLPVIKDLVPDMTHFYAQYASIK-----PWLQAKTPTPPNRERLQ 157
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ID + ++YPLP + V+KDLVPDM +FYAQY SI+PWL
Sbjct: 94 GRNTLACTKPIDGIEGEIRVYPLPSLPVIKDLVPDMTHFYAQYASIKPWL 143
>gi|319997170|gb|ADV91179.1| mitochondrial succinate dehydrogenase iron-sulphur subunit-like
protein 2 [Karlodinium micrum]
Length = 291
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 157/284 (55%), Gaps = 58/284 (20%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEK-----PAKYKTFAIYRWNPDKPDEKPTMQEYKVDL-- 148
A + RS S + + A + + + FAIYR++P+K +P +QEY +DL
Sbjct: 2 FAAASFRSMLPSGTTALSALASRRTFSAATQMQKFAIYRYDPEK-TARPFLQEYDIDLKQ 60
Query: 149 --------------------------------------NNK--------IDANDKVSKIY 162
N K I+ + K +I
Sbjct: 61 CGPMILDALIKVKDEVDPTLTFRRSCREGICGSCAMNINGKNGLACLIYIEPDAKPIEIQ 120
Query: 163 PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDGLYECIL 221
PLPH YVVKDLVPD+ NFY QYKSI+PWL+R D++ G +Y QS +DR KLDG+YECIL
Sbjct: 121 PLPHSYVVKDLVPDLTNFYNQYKSIEPWLKRKDEKAPGEKEYYQSHEDRLKLDGMYECIL 180
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CA C TSCPSYWWN E YLGPAVLMQAYRWI DSRD+ T +RL + D +YRCH IMN
Sbjct: 181 CASCMTSCPSYWWNPEYYLGPAVLMQAYRWIADSRDQYTEERLAWVNDTMKLYRCHGIMN 240
Query: 282 CTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDAN 325
CT CPKGL+P +AI E+K + + + K G A +I N
Sbjct: 241 CTNCCPKGLDPAKAIVELK---AQVAQTYKDGWQEMAAGEISKN 281
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIK+K+E+DPTLTFRRSCREGICGSCAMNI G N LAC+ I+ + K +I PLP
Sbjct: 64 MILDALIKVKDEVDPTLTFRRSCREGICGSCAMNINGKNGLACLIYIEPDAKPIEIQPLP 123
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H YVVKDLVPD+ NFY QYKSI+ PW
Sbjct: 124 HSYVVKDLVPDLTNFYNQYKSIE-----PW 148
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L I+ + K +I PLPH YVVKDLVPD+ NFY QYKSI+PWL R
Sbjct: 105 ACLIYIEPDAKPIEIQPLPHSYVVKDLVPDLTNFYNQYKSIEPWLKR 151
>gi|347761192|ref|YP_004868753.1| succinate dehydrogenase Fe-S protein subunit [Gluconacetobacter
xylinus NBRC 3288]
gi|347580162|dbj|BAK84383.1| succinate dehydrogenase Fe-S protein subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 260
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 140/231 (60%), Gaps = 49/231 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK----- 160
+ K F IYRW+PD D+ P + Y++DL+ N +D+ +
Sbjct: 25 SNVKNFRIYRWSPDD-DKNPVVDTYEIDLDKIGPMVLDALIHIKNDVDSTLTFRRSCREG 83
Query: 161 -----------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
IYPLPHM V+KDLVPD++ YAQ +SI+PWL
Sbjct: 84 ICGSCAMNIAGENTLACLKPIRDIEGDIAIYPLPHMPVIKDLVPDLDGAYAQLRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ D +++ QS+++R +LDG++ECILC CCSTSCPSYWWNG++YLGPA L+ AYRW
Sbjct: 144 KSDTLPPPDSERRQSIEERAELDGMWECILCFCCSTSCPSYWWNGDRYLGPATLLAAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
I DSRDE T DRL+ L+DP +Y C TIMNCT+TCPKGLNP +AI IK+L
Sbjct: 204 IADSRDEHTGDRLDALEDPLKLYACRTIMNCTQTCPKGLNPAKAIGRIKEL 254
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 70/96 (72%), Gaps = 5/96 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ I + IYPLP
Sbjct: 58 MVLDALIHIKNDVDSTLTFRRSCREGICGSCAMNIAGENTLACLKPIRDIEGDIAIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTL 96
HM V+KDLVPD++ YAQ +SI+ PW TL
Sbjct: 118 HMPVIKDLVPDLDGAYAQLRSIE-----PWLKSDTL 148
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLVPD++ YAQ +SI+PWL
Sbjct: 113 IYPLPHMPVIKDLVPDLDGAYAQLRSIEPWL 143
>gi|330991159|ref|ZP_08315112.1| Succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter sp.
SXCC-1]
gi|329761745|gb|EGG78236.1| Succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter sp.
SXCC-1]
Length = 260
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 139/231 (60%), Gaps = 49/231 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK----- 160
+ K F IYRW+PD D P + Y++DL+ N +D+ +
Sbjct: 25 SNVKNFRIYRWSPDD-DRNPVVDTYEIDLDKIGPMVLDALIHIKNDVDSTLTFRRSCREG 83
Query: 161 -----------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
IYPLPHM V+KDLVPD++ YAQ +SI+PWL
Sbjct: 84 ICGSCAMNIAGENTLACLKPIRDIEGDIAIYPLPHMPVIKDLVPDLDGAYAQLRSIEPWL 143
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ D +++ QS+++R +LDG++ECILC CCSTSCPSYWWNG++YLGPA L+ AYRW
Sbjct: 144 KSDTLPPPDSERRQSIEERAELDGMWECILCFCCSTSCPSYWWNGDRYLGPATLLAAYRW 203
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
I DSRDE T DRL+ L+DP +Y C TIMNCT+TCPKGLNP +AI IK+L
Sbjct: 204 IADSRDEHTGDRLDALEDPLKLYACRTIMNCTQTCPKGLNPAKAIGRIKEL 254
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 70/96 (72%), Gaps = 5/96 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ I + IYPLP
Sbjct: 58 MVLDALIHIKNDVDSTLTFRRSCREGICGSCAMNIAGENTLACLKPIRDIEGDIAIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTL 96
HM V+KDLVPD++ YAQ +SI+ PW TL
Sbjct: 118 HMPVIKDLVPDLDGAYAQLRSIE-----PWLKSDTL 148
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLVPD++ YAQ +SI+PWL
Sbjct: 113 IYPLPHMPVIKDLVPDLDGAYAQLRSIEPWL 143
>gi|315497258|ref|YP_004086062.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Asticcacaulis excentricus CB 48]
gi|315415270|gb|ADU11911.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Asticcacaulis excentricus CB 48]
Length = 258
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 116/143 (81%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPHM VVKDLVPD++ FYAQY SI+P+LQ + + + LQS +R KLDGLYECI
Sbjct: 113 ISPLPHMPVVKDLVPDLSGFYAQYASIEPYLQSTTPD-PDKERLQSPANRDKLDGLYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN +KYLGPA L+QAYRWI DSRD+ T RL L+DPF +YRCHTIM
Sbjct: 172 LCACCSTSCPSYWWNQDKYLGPAALLQAYRWIADSRDDHTKKRLESLEDPFKLYRCHTIM 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC + CPKGLNP +AIAEIKK++
Sbjct: 232 NCAQVCPKGLNPAKAIAEIKKMM 254
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 67/86 (77%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN +D TL+FRRSCREGICGSCAMNIGG NTLAC + + I PLP
Sbjct: 58 MVLDALIHIKNNVDSTLSFRRSCREGICGSCAMNIGGRNTLACTKGHEEYNGEITISPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD++ FYAQY SI+ +L
Sbjct: 118 HMPVVKDLVPDLSGFYAQYASIEPYL 143
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPHM VVKDLVPD++ FYAQY SI+P+L
Sbjct: 113 ISPLPHMPVVKDLVPDLSGFYAQYASIEPYL 143
>gi|401410754|ref|XP_003884825.1| Succinate dehydrogenase iron-sulfur subunit,related [Neospora
caninum Liverpool]
gi|325119243|emb|CBZ54797.1| Succinate dehydrogenase iron-sulfur subunit,related [Neospora
caninum Liverpool]
Length = 339
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 99/159 (62%), Positives = 120/159 (75%), Gaps = 2/159 (1%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIG-NAQYLQSLDDRK 211
+AN V +I PLPHM V++DLVPDM NFYAQY+S++PWL+R N + LQS++DRK
Sbjct: 158 EANPPV-EILPLPHMMVLRDLVPDMTNFYAQYRSVEPWLKRKTAKKDPNVENLQSIEDRK 216
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDG+YECILCACCSTSCPSYWWN + YLGPAVLMQA+RWI DSRDE T +RL + D
Sbjct: 217 KLDGMYECILCACCSTSCPSYWWNPQAYLGPAVLMQAFRWIADSRDEFTEERLAAINDTM 276
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
+YRCH IMNCT +CPKGLNP AI ++K + D
Sbjct: 277 KLYRCHGIMNCTVSCPKGLNPAGAIKKMKDQVEARFSPD 315
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 96/201 (47%), Gaps = 71/201 (35%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID------------ 48
MVLDALI IK+ DPTL FRRSCREGICGSCAMN+ G N LAC++ I
Sbjct: 70 MVLDALIAIKDRQDPTLVFRRSCREGICGSCAMNVDGKNCLACLTPIQRAERENEAMRLM 129
Query: 49 -----------------ANDKVS-----------KIYPLPHMYVVKDLVPDMNNFYAQYK 80
DK++ +I PLPHM V++DLVPDM NFYAQY+
Sbjct: 130 PGQDIKHDRHEEEVVSRVTDKINHALFREANPPVEILPLPHMMVLRDLVPDMTNFYAQYR 189
Query: 81 SIQRHLGGPWKILGTLTAK---NIRSFQ---------------LSAAASSAVPAE--KPA 120
S++ PW L TAK N+ + Q L A S++ P+ P
Sbjct: 190 SVE-----PW--LKRKTAKKDPNVENLQSIEDRKKLDGMYECILCACCSTSCPSYWWNPQ 242
Query: 121 KYKTFAI----YRWNPDKPDE 137
Y A+ +RW D DE
Sbjct: 243 AYLGPAVLMQAFRWIADSRDE 263
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+AN V +I PLPHM V++DLVPDM NFYAQY+S++PWL R
Sbjct: 158 EANPPV-EILPLPHMMVLRDLVPDMTNFYAQYRSVEPWLKR 197
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
+A+A S + K A +TFAIYR+NP+ D++P MQ+Y++D++
Sbjct: 24 AASAGSQMEGPKTADVRTFAIYRYNPET-DKRPYMQKYELDVST 66
>gi|144898840|emb|CAM75704.1| succinate dehydrogenase iron-sulfur protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 260
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 139/231 (60%), Gaps = 49/231 (21%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKV-------- 158
K K F IYR++PD P + Y++DL+ N+ID+
Sbjct: 26 KVKAFKIYRYDPDS-GANPRLDTYEIDLDACGPMVLDALLKIKNEIDSTLTFRRSCREGI 84
Query: 159 --------------------------SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
+KIYPLPHM V+KDL+PD+ YAQ SI+PW+Q
Sbjct: 85 CGSCAMNIDGANTLACLKPIEDIKGDAKIYPLPHMPVIKDLIPDLTVPYAQLASIKPWMQ 144
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ + LQS ++R+KLDG++ECILC CC TSCPSYWWNG++YLGPAVL+QA RWI
Sbjct: 145 TQTPPPPDGERLQSPEEREKLDGMWECILCFCCQTSCPSYWWNGDRYLGPAVLLQAARWI 204
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI IK L
Sbjct: 205 HDSRDEMTGERLDALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGSIKTKL 255
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+ I+ +KIYPLP
Sbjct: 58 MVLDALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGANTLACLKPIEDIKGDAKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDL+PD+ YAQ SI+ PW
Sbjct: 118 HMPVIKDLIPDLTVPYAQLASIK-----PW 142
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ +KIYPLPHM V+KDL+PD+ YAQ SI+PW+
Sbjct: 99 ACLKPIEDIKGDAKIYPLPHMPVIKDLIPDLTVPYAQLASIKPWM 143
>gi|339018100|ref|ZP_08644242.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
tropicalis NBRC 101654]
gi|338752765|dbj|GAA07546.1| succinate dehydrogenase Fe-S protein subunit [Acetobacter
tropicalis NBRC 101654]
Length = 260
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 145/237 (61%), Gaps = 50/237 (21%)
Query: 115 PAEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------- 150
PA AK +TF +YRW PD D+ P + Y++DL+
Sbjct: 19 PAPAGAKNVRTFKVYRWTPDD-DKNPVVDSYELDLDTIGPMVLDAIIHIKNEVDPTLTFR 77
Query: 151 -------------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYK 185
ID + ++ +IYPLPHM +VKDLV +++ YAQ +
Sbjct: 78 RSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLPHMPIVKDLVSNLDGAYAQLR 137
Query: 186 SIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVL 245
SI+PW++ D +++ QS+++R+KLDG++ECILC CC+TSCPSYWWNG++YLGPAVL
Sbjct: 138 SIEPWMKSDSAPPPDSERRQSIEEREKLDGMWECILCFCCTTSCPSYWWNGDRYLGPAVL 197
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+ AYRWI DSRDE T DRL+ L+D F +Y C TIMNCT+TCPKGLNP +AI IK+L
Sbjct: 198 LAAYRWIADSRDEHTGDRLDSLEDTFKLYACRTIMNCTQTCPKGLNPAKAIGRIKEL 254
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+I IKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I +IYPLP
Sbjct: 58 MVLDAIIHIKNEVDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIKDIKGDVRIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM +VKDLV +++ YAQ +SI+ PW
Sbjct: 118 HMPIVKDLVSNLDGAYAQLRSIE-----PW 142
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+IYPLPHM +VKDLV +++ YAQ +SI+PW+
Sbjct: 112 RIYPLPHMPIVKDLVSNLDGAYAQLRSIEPWM 143
>gi|90421596|ref|YP_529966.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas
palustris BisB18]
gi|90103610|gb|ABD85647.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris
BisB18]
Length = 260
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D KI PLPH VVKDLVPD+ NFYAQY SI+PWLQ ++ Q+ +DR K
Sbjct: 106 DVKDSAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWLQTITPT-PQKEWRQTHEDRAK 164
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCSTSCPSYWWN +++LGPA L+QA RW+ DSRDE T +RL+ L+DPF
Sbjct: 165 LDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQATRWVKDSRDEATGERLDNLEDPFR 224
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+YRCHTIMNC + CPKGLNP AIA +K
Sbjct: 225 IYRCHTIMNCAKACPKGLNPSEAIANLK 252
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 71/98 (72%), Gaps = 8/98 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D D KI PL
Sbjct: 58 MVLDGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVKDSAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT 97
PH VVKDLVPD+ NFYAQY SI+ PW L T+T
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LQTIT 148
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D D KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 94 GENTLACTKAMDDVKDSAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|300122998|emb|CBK24005.2| unnamed protein product [Blastocystis hominis]
Length = 252
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 135/235 (57%), Gaps = 51/235 (21%)
Query: 122 YKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------------- 150
YK F IYR+NP K D KP + Y +DL +
Sbjct: 18 YKLFRIYRYNPAK-DLKPHYESYVIDLMDCGTMVLDALFKIKNEQDPTFAFRRSCREGIC 76
Query: 151 -----------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KI N + PLPHM+V+KDL+PDM NFY QY SI+PWLQ+
Sbjct: 77 GSCAMNINGENGLACLTKIPKNTDACTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQK 136
Query: 194 DKENIGN--AQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
+ + LQS +DR LDGLYECILCACCSTSCPSYWW+G+KYLGP++L QAYRW
Sbjct: 137 KSAVSTDYKVENLQSHEDRLLLDGLYECILCACCSTSCPSYWWHGDKYLGPSILQQAYRW 196
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
I DSRDE T +RL L D + +YRCH IMNCT CPK LNPGR+I ++K + +
Sbjct: 197 IADSRDEMTEERLKSLDDTYKLYRCHAIMNCTHACPKNLNPGRSIHKLKHAIHHM 251
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 90/155 (58%), Gaps = 18/155 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE DPT FRRSCREGICGSCAMNI G N LAC++KI N + PLP
Sbjct: 49 MVLDALFKIKNEQDPTFAFRRSCREGICGSCAMNINGENGLACLTKIPKNTDACTVRPLP 108
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ------------LSA 108
HM+V+KDL+PDM NFY QY SI+ L + +N++S + L A
Sbjct: 109 HMFVIKDLIPDMTNFYEQYASIKPWLQKKSAVSTDYKVENLQSHEDRLLLDGLYECILCA 168
Query: 109 AASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ KY +I YRW D DE
Sbjct: 169 CCSTSCPSYWWHGDKYLGPSILQQAYRWIADSRDE 203
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI N + PLPHM+V+KDL+PDM NFY QY SI+PWL +
Sbjct: 90 ACLTKIPKNTDACTVRPLPHMFVIKDLIPDMTNFYEQYASIKPWLQK 136
>gi|365879907|ref|ZP_09419303.1| succinate dehydrogenase, FeS subunit [Bradyrhizobium sp. ORS 375]
gi|365292045|emb|CCD91834.1| succinate dehydrogenase, FeS subunit [Bradyrhizobium sp. ORS 375]
Length = 258
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 137/237 (57%), Gaps = 50/237 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDA------ 154
P K + F IYRWNPD P M Y VD + N ID+
Sbjct: 19 PKPKSVTLREFRIYRWNPDV-GGNPQMDSYHVDTSDCGPMVLDGLIWIKNNIDSTLAFRR 77
Query: 155 ----------------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
+D ++ PLPH VVKDLVPD+ NFYAQ
Sbjct: 78 SCREGICGSCSMNINGQNTLACTKSMSDHDGPVQLLPLPHQPVVKDLVPDLTNFYAQLSV 137
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWLQ K ++ QS +DR+KL+GLYECILCACCSTSCPSYWWN E++LGPA L+
Sbjct: 138 IEPWLQ-TKTPTPQKEWRQSEEDREKLNGLYECILCACCSTSCPSYWWNSERFLGPAALI 196
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QA RWI DSRDE T +RL+ L+DPF +YRCHTI+NC + CPKGLNPG AI+E++ L
Sbjct: 197 QAARWINDSRDEATGERLDILEDPFRLYRCHTILNCAKACPKGLNPGEAISELRMKL 253
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LI IKN +D TL FRRSCREGICGSC+MNI G NTLAC + +D ++ PLP
Sbjct: 57 MVLDGLIWIKNNIDSTLAFRRSCREGICGSCSMNINGQNTLACTKSMSDHDGPVQLLPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H VVKDLVPD+ NFYAQ I+ PW
Sbjct: 117 HQPVVKDLVPDLTNFYAQLSVIE-----PW 141
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K + +D ++ PLPH VVKDLVPD+ NFYAQ I+PWL
Sbjct: 93 GQNTLACTKSMSDHDGPVQLLPLPHQPVVKDLVPDLTNFYAQLSVIEPWL 142
>gi|402848965|ref|ZP_10897211.1| Succinate dehydrogenase iron-sulfur protein [Rhodovulum sp. PH10]
gi|402500841|gb|EJW12507.1| Succinate dehydrogenase iron-sulfur protein [Rhodovulum sp. PH10]
Length = 260
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 141/233 (60%), Gaps = 52/233 (22%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN---------- 155
+ K F +YRWNPD + P M + VDL+ NKID
Sbjct: 25 TRLKEFRVYRWNPDD-EANPRMDTFSVDLDDCGPMVLDALLWIKNKIDPTLAFRRSCREG 83
Query: 156 ---------DKVS---------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
D V+ +I PLPH V KDLVPD+ NF+AQ+ +QPWL
Sbjct: 84 ICGSCAMNIDGVNTLACTKDIAEIKGPVRISPLPHQPVAKDLVPDLTNFFAQHALVQPWL 143
Query: 192 QRDKENIG-NAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
Q E + ++ QS +DR+ LDGLYECILCACCSTSCP YWWN ++YLGPA L+ AYR
Sbjct: 144 Q--TETVAPEKEWKQSREDRELLDGLYECILCACCSTSCPEYWWNPDRYLGPAALLHAYR 201
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
W+IDSRDE T +RL+ L+DPF ++RC TI+NC++ CPKGLNP +AIAE+KKL+
Sbjct: 202 WVIDSRDEATGERLDLLEDPFRLFRCVTILNCSKACPKGLNPAKAIAELKKLM 254
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 81/148 (54%), Gaps = 30/148 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN++DPTL FRRSCREGICGSCAMNI GVNTLAC I +I PLP
Sbjct: 58 MVLDALLWIKNKIDPTLAFRRSCREGICGSCAMNIDGVNTLACTKDIAEIKGPVRISPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAK--------------NIRSFQL 106
H V KDLVPD+ NF+AQ+ +Q PW T+ + + L
Sbjct: 118 HQPVAKDLVPDLTNFFAQHALVQ-----PWLQTETVAPEKEWKQSREDRELLDGLYECIL 172
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P Y WNPD+
Sbjct: 173 CACCSTSCPE-----------YWWNPDR 189
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A K A K +I PLPH V KDLVPD+ NF+AQ+ +QPWL
Sbjct: 94 GVNTLACTKDIAEIKGPVRISPLPHQPVAKDLVPDLTNFFAQHALVQPWL 143
>gi|354595032|ref|ZP_09013069.1| succinate dehydrogenase iron-sulfur subunit [Commensalibacter
intestini A911]
gi|353671871|gb|EHD13573.1| succinate dehydrogenase iron-sulfur subunit [Commensalibacter
intestini A911]
Length = 260
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 137/228 (60%), Gaps = 49/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
K F IYRW+PD D P Y+VDL+ N+ID +
Sbjct: 28 KRFKIYRWSPDD-DRNPVTDTYEVDLDKIGPMVLDALIYIKNEIDPTLSFRRSCREGVCG 86
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
IYPLPHM VVKDL+PD++ YAQ + ++PWL+ D
Sbjct: 87 SCAMNIDGHNTLACLKYIKDINSDVPIYPLPHMPVVKDLIPDLSGPYAQLREVEPWLKSD 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ + LQS+++RKK+DGLYECILC CCSTSCPSYWWNG+KYLGPAVL+ A RW+ D
Sbjct: 147 TPPPPDKERLQSVEERKKMDGLYECILCFCCSTSCPSYWWNGDKYLGPAVLLAAMRWVSD 206
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
SRDE +RLN+L+D +Y C TIMNCT+TCPKGLNP +AIAE+K L
Sbjct: 207 SRDEYAGERLNELEDSMRLYACRTIMNCTQTCPKGLNPAKAIAELKHL 254
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKNE+DPTL+FRRSCREG+CGSCAMNI G NTLAC+ I + IYPLP
Sbjct: 58 MVLDALIYIKNEIDPTLSFRRSCREGVCGSCAMNIDGHNTLACLKYIKDINSDVPIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD++ YAQ + ++ PW
Sbjct: 118 HMPVVKDLIPDLSGPYAQLREVE-----PW 142
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM VVKDL+PD++ YAQ + ++PWL
Sbjct: 113 IYPLPHMPVVKDLIPDLSGPYAQLREVEPWL 143
>gi|114799946|ref|YP_761920.1| succinate dehydrogenase iron-sulfur subunit [Hyphomonas neptunium
ATCC 15444]
gi|114740120|gb|ABI78245.1| succinate dehydrogenase, iron-sulfur protein [Hyphomonas neptunium
ATCC 15444]
Length = 260
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/143 (67%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDL+PD+ NFYAQ+ +QP+L R ++ QS +DR KLDGLYECI
Sbjct: 114 IAPLPHQPVVKDLIPDLTNFYAQHAYVQPFL-RTSTPTPEKEWRQSAEDRTKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCA CSTSCPSYWWNG+KYLGPA L+QAYRW+IDSRDE T +RL+ L+DPF +YRCHTIM
Sbjct: 173 LCASCSTSCPSYWWNGDKYLGPAALLQAYRWLIDSRDEATGERLDDLEDPFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NCT+ CPKGLNP AIA+IK ++
Sbjct: 233 NCTQVCPKGLNPAEAIAKIKHMM 255
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLAC---ISKIDANDKVSKIY 57
M+LD LI IKN +DPTL FRRSCREG+CGSCAMNI G NT+AC ++ + + + I
Sbjct: 58 MILDVLIYIKNNIDPTLAFRRSCREGVCGSCAMNIAGRNTIACTKGFEELPSGEVI--IA 115
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLPH VVKDL+PD+ NFYAQ+ +Q L
Sbjct: 116 PLPHQPVVKDLIPDLTNFYAQHAYVQPFL 144
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
I PLPH VVKDL+PD+ NFYAQ+ +QP+L S
Sbjct: 114 IAPLPHQPVVKDLIPDLTNFYAQHAYVQPFLRTS 147
>gi|347758668|ref|YP_004866230.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Micavibrio aeruginosavorus ARL-13]
gi|347591186|gb|AEP10228.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Micavibrio aeruginosavorus ARL-13]
Length = 265
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 141/241 (58%), Gaps = 55/241 (22%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------------------- 150
E K KTF IYRW+P+K DE P Y++DL
Sbjct: 22 GEGAKKKKTFKIYRWDPEK-DENPREDRYEIDLEKCGPMVLDALIHIKNDVDSTLTFRRS 80
Query: 151 -----------KIDANDKVS------------KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
ID + ++ KI PLPHM VVKDLVPD + AQY+SI
Sbjct: 81 CREGICGSCAMNIDGKNTLACLKPISEISGDAKISPLPHMPVVKDLVPDQTHIVAQYQSI 140
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGL-----YECILCACCSTSCPSYWWNGEKYLGP 242
+PW++ + + LQS +D L+G CILC CCSTSCPSYWWNG++++GP
Sbjct: 141 EPWMKTESP-APTRERLQSAEDADLLNGTDGRGPAACILCFCCSTSCPSYWWNGDRFMGP 199
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
A+LMQ+YRW+IDSRDE T +RL+QL+DPF +YRCHTIMNCT CPKGLNP +AIAE+KKL
Sbjct: 200 AILMQSYRWVIDSRDEATGERLDQLEDPFRLYRCHTIMNCTNACPKGLNPAKAIAELKKL 259
Query: 303 L 303
+
Sbjct: 260 M 260
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ I +KI PLP
Sbjct: 59 MVLDALIHIKNDVDSTLTFRRSCREGICGSCAMNIDGKNTLACLKPISEISGDAKISPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD + AQY+SI+ PW
Sbjct: 119 HMPVVKDLVPDQTHIVAQYQSIE-----PW 143
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I +KI PLPHM VVKDLVPD + AQY+SI+PW+
Sbjct: 100 ACLKPISEISGDAKISPLPHMPVVKDLVPDQTHIVAQYQSIEPWM 144
>gi|452963649|gb|EME68711.1| succinate dehydrogenase iron-sulfur subunit [Magnetospirillum sp.
SO-1]
Length = 259
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 139/227 (61%), Gaps = 49/227 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
K F IYR++PD + P + Y++DL+ N+ID+ +
Sbjct: 27 KVFKIYRYDPDS-NANPRLDSYEIDLDACGPMVLDALLKIKNEIDSTLTFRRSCREGICG 85
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
IYPLPHM VVKDL+PD+ YAQ SI+PW+Q
Sbjct: 86 SCAMNIDGTNTLACLKPIEDIKGDAAIYPLPHMPVVKDLIPDLTLPYAQLASIKPWMQTQ 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ + LQS ++R+KLDGL+ECILC CC TSCPSYWWNG++YLGP+VL+QA RWI+D
Sbjct: 146 TAPPPDGERLQSPEEREKLDGLWECILCFCCQTSCPSYWWNGDRYLGPSVLLQAARWILD 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
SRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI IK+
Sbjct: 206 SRDEMTGERLDDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGAIKE 252
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+ I+ + IYPLP
Sbjct: 57 MVLDALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEDIKGDAAIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ YAQ SI+ PW
Sbjct: 117 HMPVVKDLIPDLTLPYAQLASIK-----PW 141
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + IYPLPHM VVKDL+PD+ YAQ SI+PW+
Sbjct: 98 ACLKPIEDIKGDAAIYPLPHMPVVKDLIPDLTLPYAQLASIKPWM 142
>gi|83313052|ref|YP_423316.1| succinate dehydrogenase iron-sulfur subunit [Magnetospirillum
magneticum AMB-1]
gi|82947893|dbj|BAE52757.1| Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
[Magnetospirillum magneticum AMB-1]
Length = 259
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 139/227 (61%), Gaps = 49/227 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
K F IYR++PD + P + Y++DL+ N+ID+ +
Sbjct: 27 KVFKIYRYDPDA-NANPRLDSYEIDLDACGPMVLDALLKIKNEIDSTLTFRRSCREGICG 85
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
IYPLPHM VVKDL+PD+ YAQ SI+PW+Q
Sbjct: 86 SCAMNIDGTNTLACLKPIEDIKGEAAIYPLPHMPVVKDLIPDLTLPYAQLASIKPWMQTQ 145
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ + LQS ++R+KLDGL+ECILC CC TSCPSYWWNG++YLGP+VL+QA RWI+D
Sbjct: 146 TAPPPDGERLQSPEEREKLDGLWECILCFCCQTSCPSYWWNGDRYLGPSVLLQAARWILD 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
SRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP +AI IK+
Sbjct: 206 SRDEMTGERLDDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGAIKE 252
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC+ I+ + IYPLP
Sbjct: 57 MVLDALLKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACLKPIEDIKGEAAIYPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDL+PD+ YAQ SI+ PW
Sbjct: 117 HMPVVKDLIPDLTLPYAQLASIK-----PW 141
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ + IYPLPHM VVKDL+PD+ YAQ SI+PW+
Sbjct: 98 ACLKPIEDIKGEAAIYPLPHMPVVKDLIPDLTLPYAQLASIKPWM 142
>gi|429769792|ref|ZP_19301885.1| succinate dehydrogenase iron-sulfur subunit [Brevundimonas diminuta
470-4]
gi|429186249|gb|EKY27201.1| succinate dehydrogenase iron-sulfur subunit [Brevundimonas diminuta
470-4]
Length = 265
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/149 (67%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDLV D++ FYAQY SIQP+LQ D + + LQS +DR+KLDGLYECI
Sbjct: 114 IAPLPHQPVVKDLVTDLSLFYAQYDSIQPYLQSDLPD-PEKERLQSPEDREKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN E+YLGPA L+Q+YRWI DSRD+ T RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNQEEYLGPAALLQSYRWIADSRDDATQKRLDDLEDPFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
NC + CPKGLNP +AIAE KKL+ +K
Sbjct: 233 NCAQVCPKGLNPAKAIAETKKLMVSPSRK 261
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISK-IDANDKVSKIYPL 59
M+LDALI IKNE+DPTL+FRRSCREGICGSC+MN+ G N LAC + + I PL
Sbjct: 58 MLLDALIHIKNEIDPTLSFRRSCREGICGSCSMNVDGRNALACTKGWAECSSHNITIAPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH VVKDLV D++ FYAQY SIQ +L
Sbjct: 118 PHQPVVKDLVTDLSLFYAQYDSIQPYL 144
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPH VVKDLV D++ FYAQY SIQP+L
Sbjct: 114 IAPLPHQPVVKDLVTDLSLFYAQYDSIQPYL 144
>gi|355751408|gb|EHH55663.1| hypothetical protein EGM_04911 [Macaca fascicularis]
Length = 241
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 144/217 (66%), Gaps = 23/217 (10%)
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN-------------- 149
Q S A +A A A+ KTFAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 23 LQASGRARTAAAAAAAARIKTFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIK 82
Query: 150 NKIDANDKVSKIYPLPHMYVVKDLVPDMN--NFYAQYKSIQPWLQRDKENIGNAQYLQSL 207
N+ID+ + + ++N N A + I L ++ G Q LQS+
Sbjct: 83 NEIDSTLTFRRSC---REGICGSCAININGGNTLACTRRIDTNLNKE----GKQQCLQSI 135
Query: 208 DDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL 267
++ +KLDGLYECILCACCSTSCPSYWWNG+ YLGPAVLMQAYRW+IDSRD+ T + L +
Sbjct: 136 EEHEKLDGLYECILCACCSTSCPSYWWNGDNYLGPAVLMQAYRWMIDSRDDLTEEHLAKP 195
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+DPFS++RCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 196 QDPFSLHRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 232
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 44/50 (88%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN 50
MVLDALIKIKNE+D TLTFRRSCREGICGSCA+NI G NTLAC +ID N
Sbjct: 73 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAININGGNTLACTRRIDTN 122
>gi|237843099|ref|XP_002370847.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Toxoplasma gondii ME49]
gi|211968511|gb|EEB03707.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Toxoplasma gondii ME49]
gi|221482163|gb|EEE20524.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Toxoplasma gondii GT1]
gi|221502458|gb|EEE28185.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Toxoplasma gondii VEG]
Length = 342
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 119/149 (79%), Gaps = 2/149 (1%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRK 211
+AN V +I PLPHM V++DLVPDM NFYAQY+S++PWL+R + N + LQS++DR+
Sbjct: 161 EANPPV-EILPLPHMMVLRDLVPDMTNFYAQYRSVEPWLKRKTPKKDPNVENLQSIEDRR 219
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDG+YECILCACCSTSCPSYWWN + YLGPAVLMQA+RWI DSRDE T +RL + D
Sbjct: 220 KLDGMYECILCACCSTSCPSYWWNPQAYLGPAVLMQAFRWIADSRDEFTEERLAAINDTM 279
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+YRCH IMNCT +CPKGLNP AI ++K
Sbjct: 280 KLYRCHGIMNCTVSCPKGLNPAGAIQKMK 308
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 95/199 (47%), Gaps = 67/199 (33%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-------- 52
M+LDALI IK+ DP+L FRRSCREGICGSCAMN+ G N LAC++ I D+
Sbjct: 73 MILDALIAIKDRQDPSLVFRRSCREGICGSCAMNVDGKNCLACLTPIKRGDRENEAMRLM 132
Query: 53 --------------VSK------------------IYPLPHMYVVKDLVPDMNNFYAQYK 80
VS+ I PLPHM V++DLVPDM NFYAQY+
Sbjct: 133 PGQDIKHDRHEEEVVSRVTDKINHALFREANPPVEILPLPHMMVLRDLVPDMTNFYAQYR 192
Query: 81 SIQRHLGGPWKILGT----LTAKNIRSFQ------------LSAAASSAVPAE--KPAKY 122
S++ PW T +N++S + L A S++ P+ P Y
Sbjct: 193 SVE-----PWLKRKTPKKDPNVENLQSIEDRRKLDGMYECILCACCSTSCPSYWWNPQAY 247
Query: 123 KTFAI----YRWNPDKPDE 137
A+ +RW D DE
Sbjct: 248 LGPAVLMQAFRWIADSRDE 266
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+AN V +I PLPHM V++DLVPDM NFYAQY+S++PWL R
Sbjct: 161 EANPPV-EILPLPHMMVLRDLVPDMTNFYAQYRSVEPWLKR 200
>gi|254796892|ref|YP_003081729.1| succinate dehydrogenase iron-sulfur subunit [Neorickettsia risticii
str. Illinois]
gi|254590128|gb|ACT69490.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Neorickettsia risticii str. Illinois]
Length = 254
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+IYPLPHM V+KDLV D+ F+ Y+SI+PWL +K N G ++LQ ++R+KL GL++C
Sbjct: 109 RIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWLHSEKSNDGK-EHLQMPEEREKLTGLHDC 167
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWNG+KYLGPA L+QAYRW++DSRD K +RL L D F +YRCHTI
Sbjct: 168 ILCACCSTSCPSFWWNGDKYLGPAALLQAYRWLVDSRDSKKKERLEFLTDSFRLYRCHTI 227
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC + CPKGLNP +AIAEIKK++
Sbjct: 228 MNCAQACPKGLNPAKAIAEIKKMI 251
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIK+K+E+DPTLTFRRSCREG+CGSCAMNI G NTLAC ++D +IYPLP
Sbjct: 55 MILDALIKVKDEVDPTLTFRRSCREGVCGSCAMNIDGRNTLACTKRMDEIKGEIRIYPLP 114
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLV D+ F+ Y+SI+ PW
Sbjct: 115 HMRVLKDLVTDLTVFFQHYRSIK-----PW 139
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A ++D +IYPLPHM V+KDLV D+ F+ Y+SI+PWL
Sbjct: 96 ACTKRMDEIKGEIRIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWL 140
>gi|355565783|gb|EHH22212.1| hypothetical protein EGK_05437 [Macaca mulatta]
Length = 239
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 136/198 (68%), Gaps = 23/198 (11%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSKIYPLPHMY 168
KTFAIYRW+PDK +KP MQ Y+VDLN N+ID+ +
Sbjct: 40 KTFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEIDSTLTFRRSC---REG 96
Query: 169 VVKDLVPDMN--NFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
+ ++N N A + I L ++ G Q LQS+++ +KLDGLYECILCACCS
Sbjct: 97 ICGSCAININGGNTLACTRRIDTNLNKE----GKQQCLQSIEEHEKLDGLYECILCACCS 152
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWNG+ YLGPAVLMQAYRW+IDSRD+ T + L + +DPFS++RCHTIMNCTRTC
Sbjct: 153 TSCPSYWWNGDNYLGPAVLMQAYRWMIDSRDDLTEEHLAKPQDPFSLHRCHTIMNCTRTC 212
Query: 287 PKGLNPGRAIAEIKKLLS 304
PKGLNPG+AIAE+KK+++
Sbjct: 213 PKGLNPGKAIAEVKKMMA 230
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 44/50 (88%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN 50
MVLDALIKIKNE+D TLTFRRSCREGICGSCA+NI G NTLAC +ID N
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAININGGNTLACTRRIDTN 120
>gi|329847593|ref|ZP_08262621.1| succinate dehydrogenase iron-sulfur subunit [Asticcacaulis
biprosthecum C19]
gi|328842656|gb|EGF92225.1| succinate dehydrogenase iron-sulfur subunit [Asticcacaulis
biprosthecum C19]
Length = 258
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 141/236 (59%), Gaps = 50/236 (21%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDA------- 154
A++ +T+ IYR++PD E P Y+VD + N ID+
Sbjct: 21 AKRTKTTRTYRIYRFDPDT-GENPRWDTYEVDSADHGPMLLDSLIHIKNSIDSTLAFRRS 79
Query: 155 ------------------------NDKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
+D+ S I PLPHM VVKDLVPD+ FY QY SI
Sbjct: 80 CREGICGSCAMNIGGRNTLACIKGHDEFSGEITIAPLPHMPVVKDLVPDLTGFYNQYASI 139
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+P+LQ K + LQ+ +R KLDGLYECILCACCSTSCPSYWWN +KYLGPA L+Q
Sbjct: 140 EPFLQ-TKTPDPEKERLQTPKNRDKLDGLYECILCACCSTSCPSYWWNQDKYLGPAALLQ 198
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
AYRWI DSRDE +RL L+DPF +YRCHTIMNC + CPKGLNP +AIAEIKKL+
Sbjct: 199 AYRWIADSRDENRKERLEALEDPFKLYRCHTIMNCAQVCPKGLNPAKAIAEIKKLM 254
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 63/86 (73%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD+LI IKN +D TL FRRSCREGICGSCAMNIGG NTLACI D I PLP
Sbjct: 58 MLLDSLIHIKNSIDSTLAFRRSCREGICGSCAMNIGGRNTLACIKGHDEFSGEITIAPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
HM VVKDLVPD+ FY QY SI+ L
Sbjct: 118 HMPVVKDLVPDLTGFYNQYASIEPFL 143
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 322 IDANDKVS---KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I +D+ S I PLPHM VVKDLVPD+ FY QY SI+P+L
Sbjct: 101 IKGHDEFSGEITIAPLPHMPVVKDLVPDLTGFYNQYASIEPFL 143
>gi|371572244|gb|AEX37504.1| SdhB (mitochondrion) [Gracilariopsis lemaneiformis]
Length = 250
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 118/155 (76%), Gaps = 1/155 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
++ + + IYPLPHMYV+KDL+PD+ +FY QYK I+PWL K N +YLQS DR
Sbjct: 97 LNTKEVFTTIYPLPHMYVIKDLIPDLTHFYTQYKMIKPWLINSK-NTPKKEYLQSKGDRY 155
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+GLYECILCACCS SCPSYWWN +KYLGPA+L+QAYRWI+DSRD T RLN L
Sbjct: 156 ELNGLYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWIVDSRDASTDTRLNFLNHKM 215
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306
++RCHTIMNC++TCPK LNPG+AI IK +S +
Sbjct: 216 RLFRCHTIMNCSKTCPKSLNPGKAITLIKYKISKI 250
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 71/92 (77%), Gaps = 5/92 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI+IK+ D TLTFRRSCREGICGSC+MNI G NTLAC+ ++ + + IYPLP
Sbjct: 51 MVLDALIQIKDTQDSTLTFRRSCREGICGSCSMNINGTNTLACLKSLNTKEVFTTIYPLP 110
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
HMYV+KDL+PD+ +FY QYK I+ PW I
Sbjct: 111 HMYVIKDLIPDLTHFYTQYKMIK-----PWLI 137
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G +T A L ++ + + IYPLPHMYV+KDL+PD+ +FY QYK I+PWL S
Sbjct: 87 GTNTLACLKSLNTKEVFTTIYPLPHMYVIKDLIPDLTHFYTQYKMIKPWLINS 139
>gi|88608423|ref|YP_506417.1| succinate dehydrogenase iron-sulfur subunit [Neorickettsia sennetsu
str. Miyayama]
gi|88600592|gb|ABD46060.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Neorickettsia sennetsu str. Miyayama]
Length = 254
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+IYPLPHM V+KDLV D+ F+ Y+SI+PWL +K N G ++LQ ++R+KL GL++C
Sbjct: 109 RIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWLHSEKSNNGK-EHLQMPEEREKLAGLHDC 167
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWNG+KYLGPA L+QAYRW++DSRD K +RL L D F +YRCHTI
Sbjct: 168 ILCACCSTSCPSFWWNGDKYLGPAALLQAYRWLVDSRDSKKKERLEFLADSFRLYRCHTI 227
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC + CPKGLNP +AIAEIKK++
Sbjct: 228 MNCAQACPKGLNPAKAIAEIKKMI 251
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIK+K E+DPTLTFRRSCREG+CGSCAMNI G NTLAC ++D +IYPLP
Sbjct: 55 MILDALIKVKGEIDPTLTFRRSCREGVCGSCAMNIDGRNTLACTKRMDEIKGEIRIYPLP 114
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLV D+ F+ Y+SI+ PW
Sbjct: 115 HMRVLKDLVTDLTVFFQHYRSIK-----PW 139
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A ++D +IYPLPHM V+KDLV D+ F+ Y+SI+PWL
Sbjct: 96 ACTKRMDEIKGEIRIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWL 140
>gi|294921742|ref|XP_002778710.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus
marinus ATCC 50983]
gi|239887430|gb|EER10505.1| iron-sulfur subunit of succinate dehydrogenase, putative [Perkinsus
marinus ATCC 50983]
Length = 196
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 123/168 (73%), Gaps = 4/168 (2%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK-ENIGNAQYLQSLDDRKKLDGLYEC 219
I PLPH YV+KDLVPD++NFY QYKSI+PWL+R + + G +Y QS++DR+KLDG+YEC
Sbjct: 24 IQPLPHTYVLKDLVPDLSNFYNQYKSIEPWLKRRRAKQPGEKEYYQSIEDREKLDGMYEC 83
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACC TSCPSYWWN E YLGPAVLMQAYRWI DSRDE T +R+ + D +YRCH I
Sbjct: 84 ILCACCMTSCPSYWWNPEYYLGPAVLMQAYRWIADSRDEFTTERMAWINDSMRLYRCHGI 143
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDK 327
MNCT CPKGL+P +AIA++K + +PG + AN K
Sbjct: 144 MNCTSCCPKGLDPAKAIAKMKAEIEAAY---EPGWTKIVAQESIANKK 188
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 33 MNIGGVNTLACISKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
MNI G N LAC+ I+ I PLPH YV+KDLVPD++NFY QYKSI+ PW
Sbjct: 1 MNINGKNGLACLQYIEPGPAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSIE-----PW 53
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L I+ I PLPH YV+KDLVPD++NFY QYKSI+PWL R
Sbjct: 10 ACLQYIEPGPAPIDIQPLPHTYVLKDLVPDLSNFYNQYKSIEPWLKR 56
>gi|86747450|ref|YP_483946.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas
palustris HaA2]
gi|86570478|gb|ABD05035.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris HaA2]
Length = 269
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 136/233 (58%), Gaps = 51/233 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID--------- 153
E + + F +YRWNPD + P++ Y VD + N ID
Sbjct: 31 EGATEVREFRVYRWNPDD-GKNPSVDTYYVDKHDCGPMVLDGLIWIKNNIDPTLTFRRSC 89
Query: 154 ----------------------ANDKVS----KIYPLPHMYVVKDLVPDMNNFYAQYKSI 187
A D V K+ PLPH VVKDLVPD+ NFYAQY SI
Sbjct: 90 REGVCGSCAMNIDGENTLACTKAMDDVRGEAVKVNPLPHQPVVKDLVPDLTNFYAQYASI 149
Query: 188 QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQ 247
+PWLQ ++ QS DR+KLDGLYECILCACCSTSCPSYWWN +++LGPA L+Q
Sbjct: 150 EPWLQTVTPT-PQKEWRQSHADREKLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQ 208
Query: 248 AYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
A RW+ DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIA +K
Sbjct: 209 ATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPKGLNPSEAIASLK 261
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 76/110 (69%), Gaps = 8/110 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D + K+ PL
Sbjct: 67 MVLDGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRGEAVKVNPL 126
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAA 109
PH VVKDLVPD+ NFYAQY SI+ PW L T+T + ++ S A
Sbjct: 127 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LQTVTPTPQKEWRQSHA 169
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKI--DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K D + K+ PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 103 GENTLACTKAMDDVRGEAVKVNPLPHQPVVKDLVPDLTNFYAQYASIEPWL 153
>gi|70947835|ref|XP_743495.1| iron-sulfur subunit of succinate dehydrogenase, [Plasmodium
chabaudi chabaudi]
gi|56523019|emb|CAH82158.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Plasmodium chabaudi chabaudi]
Length = 321
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLD 214
+++++I+PLP++Y++KDLV D+ NFY QYKSI PWL+R K+ G ++ QS++DRKKLD
Sbjct: 142 NEITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLD 201
Query: 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
GLYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI+D+RDE T +RL + D +Y
Sbjct: 202 GLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDTRDEYTQERLMDMNDTMKLY 261
Query: 275 RCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
RCH IMNC+ CPKGL+P +AI +K+L+ KD
Sbjct: 262 RCHGIMNCSVCCPKGLDPAKAIKHMKELVQENFSKD 297
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 103/175 (58%), Gaps = 30/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ N +++++I+PL
Sbjct: 91 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKNKNEITEIHPL 150
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------ 107
P++Y++KDLV D+ NFY QYKSI PW T K + F S
Sbjct: 151 PNLYIMKDLVADLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYE 205
Query: 108 ----AAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A+ S++ P+ P Y YRW D DE QE +D+N+ +
Sbjct: 206 CIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDTRDE--YTQERLMDMNDTM 258
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
MQ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 78 MQTFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 127
Query: 306 LVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ N +++++I+PLP++Y++KDLV D+ NFY QYKSI PWL R
Sbjct: 128 -----KNGL--ACLTEVNKNKNEITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPWLKR 179
>gi|82594137|ref|XP_725298.1| succinate dehydrogenase iron-sulfur subunit [Plasmodium yoelii
yoelii 17XNL]
gi|23480252|gb|EAA16863.1| succinate dehydrogenase iron-sulfur subunit [Plasmodium yoelii
yoelii]
Length = 321
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLD 214
+++++I+PLP++Y++KDLV D+ NFY QYKSI PWL+R K+ G ++ QS++DRKKLD
Sbjct: 142 NEITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLD 201
Query: 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
GLYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI+D+RDE T +RL + D +Y
Sbjct: 202 GLYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDTRDEYTQERLMDVNDTMKLY 261
Query: 275 RCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
RCH IMNC+ CPKGL+P +AI +K+L+ KD
Sbjct: 262 RCHGIMNCSVCCPKGLDPAKAIKHMKELVQENFSKD 297
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 103/175 (58%), Gaps = 30/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ N +++++I+PL
Sbjct: 91 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKNKNEITEIHPL 150
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------ 107
P++Y++KDLV D+ NFY QYKSI PW T K + F S
Sbjct: 151 PNLYIMKDLVADLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYE 205
Query: 108 ----AAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A+ S++ P+ P Y YRW D DE QE +D+N+ +
Sbjct: 206 CIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDTRDE--YTQERLMDVNDTM 258
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
MQ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 78 MQTFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 127
Query: 306 LVKKDKPGLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ N +++++I+PLP++Y++KDLV D+ NFY QYKSI PWL R
Sbjct: 128 -----KNGL--ACLTEVNKNKNEITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPWLKR 179
>gi|68073031|ref|XP_678430.1| iron-sulfur subunit of succinate dehydrogenase, [Plasmodium berghei
strain ANKA]
gi|56498895|emb|CAH97283.1| iron-sulfur subunit of succinate dehydrogenase, putative
[Plasmodium berghei]
Length = 321
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDG 215
++++I+PLP++Y++KDLV D+ NFY QYKSI PWL+R K+ G ++ QS++DRKKLDG
Sbjct: 143 EITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDG 202
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI+D+RDE T +RL + D +YR
Sbjct: 203 LYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDTRDEYTQERLMDINDTMKLYR 262
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
CH IMNC+ CPKGL+P +AI +K+L+ KD
Sbjct: 263 CHGIMNCSVCCPKGLDPAKAIKHMKELVQENFSKD 297
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 30/175 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K +++I+PL
Sbjct: 91 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNKDKKEITEIHPL 150
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS------------ 107
P++Y++KDLV D+ NFY QYKSI PW T K + F S
Sbjct: 151 PNLYIMKDLVADLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQSIEDRKKLDGLYE 205
Query: 108 ----AAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
A+ S++ P+ P Y YRW D DE QE +D+N+ +
Sbjct: 206 CIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDTRDE--YTQERLMDINDTM 258
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
Query: 246 MQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSG 305
MQ + ID+ D L ++KD + ++ R+C +G+ A+ ++G
Sbjct: 78 MQTFEVDIDNCGPMVLDVLIKIKDEID-----STLSFRRSCREGICGSCAMN-----ING 127
Query: 306 LVKKDKPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K +++I+PLP++Y++KDLV D+ NFY QYKSI PWL R
Sbjct: 128 -----KNGL--ACLTEVNKDKKEITEIHPLPNLYIMKDLVADLTNFYNQYKSIDPWLKR 179
>gi|324521644|gb|ADY47897.1| Succinate dehydrogenase ubiquinone iron-sulfur subunit [Ascaris
suum]
Length = 171
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 117/146 (80%), Gaps = 1/146 (0%)
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
+ KDLV DMN FYAQY IQPWLQ+ K ++G Q QS+ +++K+DGLYECILCACCS
Sbjct: 19 HAAKDLVVDMNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCACCS 78
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
TSCPSYWWN +KYLGPAVLMQAYRWIIDSRD+ +RL++++D FS ++CHTIMNCT+TC
Sbjct: 79 TSCPSYWWNADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTKTC 138
Query: 287 PKGLNPGRAIAEIKKLLSGLVKKDKP 312
PK LNP +AI EIK LL+ + K P
Sbjct: 139 PKHLNPAKAIGEIKMLLTKIRTKPAP 164
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 338 YVVKDLVPDMNNFYAQYKSIQPWLPR 363
+ KDLV DMN FYAQY IQPWL +
Sbjct: 19 HAAKDLVVDMNLFYAQYAYIQPWLQK 44
>gi|349687368|ref|ZP_08898510.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter
oboediens 174Bp2]
gi|349701086|ref|ZP_08902715.1| succinate dehydrogenase iron-sulfur subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 260
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 137/228 (60%), Gaps = 49/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
K F IYRW+PD D+ P + Y++DL+ N +D+ +
Sbjct: 28 KNFRIYRWSPDD-DKNPVVDTYEIDLDKIGPMVLDALIHIKNDVDSTLTFRRSCREGICG 86
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
IYPLPHM V+KDLVPD++ YAQ +SI PWL+ D
Sbjct: 87 SCAMNIAGENTLACLKPIRDIEGDIAIYPLPHMPVIKDLVPDLDGAYAQLRSIDPWLKSD 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+++ QS+++R +LDG++ECILC CCSTSCPSYWWNG++YLGPA L+ AYRWI D
Sbjct: 147 TLPPPDSERRQSIEERAELDGMWECILCFCCSTSCPSYWWNGDRYLGPATLLAAYRWIAD 206
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
SRDE DRL+ L+DP +Y C TIMNCT+TCPKGLNP +AI IK+L
Sbjct: 207 SRDEHAGDRLDALEDPLKLYACRTIMNCTQTCPKGLNPAKAIGRIKEL 254
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++D TLTFRRSCREGICGSCAMNI G NTLAC+ I + IYPLP
Sbjct: 58 MVLDALIHIKNDVDSTLTFRRSCREGICGSCAMNIAGENTLACLKPIRDIEGDIAIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTL 96
HM V+KDLVPD++ YAQ +SI PW TL
Sbjct: 118 HMPVIKDLVPDLDGAYAQLRSID-----PWLKSDTL 148
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM V+KDLVPD++ YAQ +SI PWL
Sbjct: 113 IYPLPHMPVIKDLVPDLDGAYAQLRSIDPWL 143
>gi|406705611|ref|YP_006755964.1| succinate dehydrogenase subunit B [alpha proteobacterium HIMB5]
gi|406651387|gb|AFS46787.1| succinate dehydrogenase subunit B [alpha proteobacterium HIMB5]
Length = 259
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH+ V +DL+ D+++ Y QY+SI+PWLQ + ++ + QS DR+KLDG YECI
Sbjct: 113 IYPLPHLKVKRDLIGDLDDLYKQYQSIEPWLQSNSKS-ETKEIFQSQKDREKLDGAYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CACCSTSCPSYWWNG+KYLGPAVL+QAYRWI+DSRDE+ RL ++ D +YRCHTI+
Sbjct: 172 MCACCSTSCPSYWWNGDKYLGPAVLLQAYRWIVDSRDEEREKRLKKVADELKLYRCHTIL 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCT CPKGLNP +AIAEIKK+L+
Sbjct: 232 NCTNACPKGLNPAKAIAEIKKMLA 255
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLD L KIKNE+DPTL +RRSC G+CGSCAMN+GG N LAC + D IYPLPH
Sbjct: 59 VLDVLNKIKNEIDPTLAYRRSCAHGVCGSCAMNMGGKNGLACTTPHAEIDGDIDIYPLPH 118
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
+ V +DL+ D+++ Y QY+SI+ PW
Sbjct: 119 LKVKRDLIGDLDDLYKQYQSIE-----PW 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ P V Y +D+ K D LN++K DP YR R+C
Sbjct: 33 YRWDPSTGENPRV--DTYEVDMDNCPSKVLDVLNKIKNEIDPTLAYR--------RSCAH 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALH-KIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ + G K GL H +ID + IYPLPH+ V +DL+ D+
Sbjct: 83 GVCGSCAMN-----MGG-----KNGLACTTPHAEIDGD---IDIYPLPHLKVKRDLIGDL 129
Query: 348 NNFYAQYKSIQPWL 361
++ Y QY+SI+PWL
Sbjct: 130 DDLYKQYQSIEPWL 143
>gi|83944808|ref|ZP_00957174.1| succinate dehydrogenase [Oceanicaulis sp. HTCC2633]
gi|83851590|gb|EAP89445.1| succinate dehydrogenase [Oceanicaulis sp. HTCC2633]
Length = 261
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Query: 146 VDLNNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQ 205
+ N ID ++ I PLPH VV+DL+PD+ NFYAQ +SI+P+L+ D ++ Q
Sbjct: 100 IACTNGIDEHNGTITIAPLPHQPVVRDLIPDLTNFYAQLESIKPYLKTDTPE-PEKEWKQ 158
Query: 206 SLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLN 265
S +DR++LDGLYECILCA CSTSCPSYWWN +KYLGPA L+QAYRWI DSRDE T +RL+
Sbjct: 159 SQEDREELDGLYECILCASCSTSCPSYWWNSDKYLGPAALLQAYRWIADSRDEATGERLD 218
Query: 266 QLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+DPF +YRCHTIMNC CPKGLNP +AI +IK L+
Sbjct: 219 DLEDPFKLYRCHTIMNCANVCPKGLNPAKAIGKIKDLM 256
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 68/86 (79%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDAL IKNE+D TL FRRSCREGICGSCAMNIGG NT+AC + ID ++ I PLP
Sbjct: 60 MILDALFFIKNEIDTTLAFRRSCREGICGSCAMNIGGRNTIACTNGIDEHNGTITIAPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H VV+DL+PD+ NFYAQ +SI+ +L
Sbjct: 120 HQPVVRDLIPDLTNFYAQLESIKPYL 145
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + ID ++ I PLPH VV+DL+PD+ NFYAQ +SI+P+L
Sbjct: 101 ACTNGIDEHNGTITIAPLPHQPVVRDLIPDLTNFYAQLESIKPYL 145
>gi|329891127|ref|ZP_08269470.1| succinate dehydrogenase iron-sulfur subunit [Brevundimonas diminuta
ATCC 11568]
gi|328846428|gb|EGF95992.1| succinate dehydrogenase iron-sulfur subunit [Brevundimonas diminuta
ATCC 11568]
Length = 265
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/149 (67%), Positives = 117/149 (78%), Gaps = 1/149 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDLV D++ FYAQY SIQP+LQ D + + LQS DR+KLDGLYECI
Sbjct: 114 IAPLPHQPVVKDLVTDLSLFYAQYDSIQPYLQSDLPD-PEKERLQSPADREKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN E+YLGPA L+Q+YRWI DSRD+ T RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNQEEYLGPAALLQSYRWISDSRDDATQKRLDDLEDPFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
NC + CPKGLNP +AIAE KKL+ +K
Sbjct: 233 NCAQVCPKGLNPAKAIAETKKLMVSPSRK 261
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LDALI IKNE+DPTL+FRRSCREGICGSC+MNI G NTLAC D + I PL
Sbjct: 58 MLLDALIHIKNEIDPTLSFRRSCREGICGSCSMNIDGRNTLACTKGWDECSSHNITIAPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH VVKDLV D++ FYAQY SIQ +L
Sbjct: 118 PHQPVVKDLVTDLSLFYAQYDSIQPYL 144
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G D + H I I PLPH VVKDLV D++ FYAQY SIQP+L
Sbjct: 103 GWDECSSHNI-------TIAPLPHQPVVKDLVTDLSLFYAQYDSIQPYL 144
>gi|30698100|ref|NP_680465.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3
[Arabidopsis thaliana]
gi|75262571|sp|Q9FJP9.1|DHSB3_ARATH RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit 3, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|10178178|dbj|BAB11652.1| succinate dehydrogenase iron-sulfur protein-like [Arabidopsis
thaliana]
gi|12049602|emb|CAC19857.1| mitochondrial succinate dehydrogenase iron-sulphur subunit
[Arabidopsis thaliana]
gi|332010628|gb|AED98011.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3
[Arabidopsis thaliana]
Length = 309
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 150/269 (55%), Gaps = 58/269 (21%)
Query: 87 GGPWKIL-GTLTAKNIRSFQLSAAASSAVPAEKPAKYKT----FAIYRWNPDKPDEKPTM 141
GG + IL G A+++ L S + EK ++K F IYRWNPDKP+ KP +
Sbjct: 29 GGDFPILNGHKAAQDLSKDTLK---SQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFL 85
Query: 142 QEYKVDLNN----------KIDANDKVSKIY----------------------------- 162
Q + VDL++ KI A D S Y
Sbjct: 86 QSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPIN 145
Query: 163 ----------PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
PLPHMYV+KDLV D+ NFY QYKS++PWL+ K ++ QS DRKK
Sbjct: 146 PNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKK 205
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACC+TSCPSYWWN E++ GPA L+QAYRWI DSRDE +RL + + +
Sbjct: 206 LDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESET 265
Query: 273 -VYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
VYRC I NCT TCPKGLNP AI ++K
Sbjct: 266 KVYRCRAIKNCTATCPKGLNPASAILKMK 294
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L KIK E D +L++RRSCREGICGSC+MNI G NT+AC+ I+ N K + I PL
Sbjct: 98 MVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYV+KDLV D+ NFY QYKS++ PW
Sbjct: 158 PHMYVIKDLVVDLTNFYQQYKSME-----PW 183
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAA-LHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A L I+ N K + I PLPHMYV+KDLV D+ NFY QYKS++PWL
Sbjct: 134 GTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWL 184
>gi|297183592|gb|ADI19719.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 257
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH+ V KDL+ D++ Y QY+SI+PWL+ + + I + + QS DR KLDG YECI
Sbjct: 113 IYPLPHLKVKKDLIGDLSTLYKQYESIEPWLKTNTK-IESKEIFQSKKDRSKLDGAYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CACCST+CPSYWWNG+KYLGPAVL+QAYRWIIDSRD++ +RL ++ D +YRCHTIM
Sbjct: 172 MCACCSTACPSYWWNGDKYLGPAVLLQAYRWIIDSRDDERKERLKKVADELKLYRCHTIM 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCT CPKGLNP +AIAEIKK+L+
Sbjct: 232 NCTNACPKGLNPAKAIAEIKKMLA 255
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 75/142 (52%), Gaps = 20/142 (14%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLD L KIKNE+DP+L +RRSC G+CGSCAMN+ G N LAC IYPLPH
Sbjct: 59 VLDLLNKIKNEIDPSLAYRRSCSHGVCGSCAMNMDGKNGLACTKPHAEIKGDINIYPLPH 118
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILG--TLTAKNIRS-------FQLSAAASS 112
+ V KDL+ D++ Y QY+SI+ L KI +K RS + A S+
Sbjct: 119 LKVKKDLIGDLSTLYKQYESIEPWLKTNTKIESKEIFQSKKDRSKLDGAYECIMCACCST 178
Query: 113 AVPAEKPAKYKTFAIYRWNPDK 134
A P+ Y WN DK
Sbjct: 179 ACPS-----------YWWNGDK 189
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 25/133 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ P + Y +DS K D LN++K DP YR R+C
Sbjct: 33 YRWDPSSGKNPRI--DTYEVDMDSCPSKVLDLLNKIKNEIDPSLAYR--------RSCSH 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ A+ + G K GL H D IYPLPH+ V KDL+ D++
Sbjct: 83 GVCGSCAMN-----MDG-----KNGLACTKPHAEIKGD--INIYPLPHLKVKKDLIGDLS 130
Query: 349 NFYAQYKSIQPWL 361
Y QY+SI+PWL
Sbjct: 131 TLYKQYESIEPWL 143
>gi|71082947|ref|YP_265666.1| succinate dehydrogenase iron-sulfur subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062060|gb|AAZ21063.1| Succinate dehydrogenase iron-sulfur protein [Candidatus
Pelagibacter ubique HTCC1062]
Length = 257
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH+ V KDL+ D++ Y QY+SI+PWL+ + + + + LQ+ +DR KLDG YECI
Sbjct: 113 IYPLPHLKVKKDLIGDLSGLYKQYESIEPWLKTNTK-VETTEILQTKEDRVKLDGAYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CACCSTSCPSYWWNG+KYLGPAVL+QAYRWI+DSRD++ +RL ++ D +YRCHTIM
Sbjct: 172 MCACCSTSCPSYWWNGDKYLGPAVLLQAYRWIVDSRDDEKKERLKKVADELKLYRCHTIM 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCT CPKGLNP +AIAE+KK+L+
Sbjct: 232 NCTNACPKGLNPAKAIAELKKMLA 255
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 76/142 (53%), Gaps = 20/142 (14%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLD L KIKNE+DP+L +RRSC G+CGSCAMN+ G N LAC + IYPLPH
Sbjct: 59 VLDILNKIKNEIDPSLAYRRSCAHGVCGSCAMNMDGKNGLACTKPHSEIEGDINIYPLPH 118
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGT--LTAKNIR-------SFQLSAAASS 112
+ V KDL+ D++ Y QY+SI+ L K+ T L K R + A S+
Sbjct: 119 LKVKKDLIGDLSGLYKQYESIEPWLKTNTKVETTEILQTKEDRVKLDGAYECIMCACCST 178
Query: 113 AVPAEKPAKYKTFAIYRWNPDK 134
+ P+ Y WN DK
Sbjct: 179 SCPS-----------YWWNGDK 189
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 25/133 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ P V Y +D+ K D LN++K DP YR R+C
Sbjct: 33 YRWDPSNGENPRV--DTYEVDMDNCPSKVLDILNKIKNEIDPSLAYR--------RSCAH 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ A+ + G K GL H D IYPLPH+ V KDL+ D++
Sbjct: 83 GVCGSCAMN-----MDG-----KNGLACTKPHSEIEGD--INIYPLPHLKVKKDLIGDLS 130
Query: 349 NFYAQYKSIQPWL 361
Y QY+SI+PWL
Sbjct: 131 GLYKQYESIEPWL 143
>gi|449275913|gb|EMC84649.1| Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial, partial [Columba livia]
Length = 208
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 131/194 (67%), Gaps = 50/194 (25%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAN----------- 155
+ K FAIYRW+PDKP +KP MQ Y+VDLN N++D+
Sbjct: 14 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGI 73
Query: 156 ------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+K++KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L
Sbjct: 74 CGSCAMNIAGGNTLACIKRIDPDLNKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 133
Query: 192 QR-DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
++ D+ G QYLQS++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYR
Sbjct: 134 KKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYR 193
Query: 251 WIIDSRDEKTADRL 264
W+IDSRD+ T +RL
Sbjct: 194 WMIDSRDDYTEERL 207
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLACI +ID + +K++KIYPL
Sbjct: 47 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIAGGNTLACIKRIDPDLNKITKIYPL 106
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 107 PHMYVVKDLVPDLSNFYAQYKSIEPYL 133
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A + +ID + +K++KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 84 GNTLACIKRIDPDLNKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 135
>gi|9653242|ref|NP_062488.1| succinate:cytochrome c oxidoreductase subunit 2 [Chondrus crispus]
gi|1352264|sp|P48932.1|DHSB_CHOCR RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit; AltName: Full=Iron-sulfur subunit of complex
II; Short=Ip
gi|1334489|emb|CAA87611.1| succinate dehydrogenase, iron-sulfur subunit [Chondrus crispus]
Length = 250
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH Y++KDLVPD++NFYAQYK I+PWL +K + LQS DR +LDGLYECI
Sbjct: 106 IYPLPHTYIIKDLVPDLSNFYAQYKLIKPWLI-NKIGFSLKENLQSKIDRLELDGLYECI 164
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCS SCPSYWWN +KYLGPA+L+QAYRWI+DSRD T +RLN L + ++RCHTIM
Sbjct: 165 LCACCSASCPSYWWNQDKYLGPAILLQAYRWIVDSRDNSTENRLNFLNNKMRLFRCHTIM 224
Query: 281 NCTRTCPKGLNPGRAIAEIK 300
NC++TCPK LNPG+AIA IK
Sbjct: 225 NCSKTCPKSLNPGKAIASIK 244
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 102/173 (58%), Gaps = 29/173 (16%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALI+IKN D +LTFRRSCREGICGSC+MNI G N+LAC+ ++ IYPLP
Sbjct: 51 MILDALIQIKNIQDSSLTFRRSCREGICGSCSMNIDGTNSLACLRSLNTKSNFITIYPLP 110
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI--LGTLTAKNIRS------------FQL 106
H Y++KDLVPD++NFYAQYK I+ PW I +G +N++S L
Sbjct: 111 HTYIIKDLVPDLSNFYAQYKLIK-----PWLINKIGFSLKENLQSKIDRLELDGLYECIL 165
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD-LNNKI 152
A S++ P+ KY AI YRW D D E +++ LNNK+
Sbjct: 166 CACCSASCPSYWWNQDKYLGPAILLQAYRWIVDSRDNS---TENRLNFLNNKM 215
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRSI 365
A L ++ IYPLPH Y++KDLVPD++NFYAQYK I+PWL I
Sbjct: 92 ACLRSLNTKSNFITIYPLPHTYIIKDLVPDLSNFYAQYKLIKPWLINKI 140
>gi|91762629|ref|ZP_01264594.1| succinate dehydrogenase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718431|gb|EAS85081.1| succinate dehydrogenase [Candidatus Pelagibacter ubique HTCC1002]
Length = 257
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH+ V KDL+ D++ Y QY+SI+PWL+ + + + + LQ+ +DR KLDG YECI
Sbjct: 113 IYPLPHLKVKKDLIGDLSGLYKQYESIEPWLKTNTK-VETTEILQTKEDRVKLDGAYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CACCSTSCPSYWWNG+KYLGPAVL+QAYRWI+DSRD++ +RL ++ D +YRCHTIM
Sbjct: 172 MCACCSTSCPSYWWNGDKYLGPAVLLQAYRWIVDSRDDEKKERLKKVADELKLYRCHTIM 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCT CPKGLNP +AIAE+KK+L+
Sbjct: 232 NCTNACPKGLNPAKAIAELKKMLA 255
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 76/142 (53%), Gaps = 20/142 (14%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLD L KIKNE+DP+L +RRSC G+CGSCAMN+ G N LAC + IYPLPH
Sbjct: 59 VLDILNKIKNEIDPSLAYRRSCAHGVCGSCAMNMDGKNGLACTKPHSEIEGDINIYPLPH 118
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGT--LTAKNIR-------SFQLSAAASS 112
+ V KDL+ D++ Y QY+SI+ L K+ T L K R + A S+
Sbjct: 119 LKVKKDLIGDLSGLYKQYESIEPWLKTNTKVETTEILQTKEDRVKLDGAYECIMCACCST 178
Query: 113 AVPAEKPAKYKTFAIYRWNPDK 134
+ P+ Y WN DK
Sbjct: 179 SCPS-----------YWWNGDK 189
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 25/133 (18%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ P V Y +D+ K D LN++K DP YR R+C
Sbjct: 33 YRWDPSNGENPRV--DTYEVDMDNCPSKVLDILNKIKNEIDPSLAYR--------RSCAH 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMN 348
G+ A+ + G K GL H D IYPLPH+ V KDL+ D++
Sbjct: 83 GVCGSCAMN-----MDG-----KNGLACTKPHSEIEGD--INIYPLPHLKVKKDLIGDLS 130
Query: 349 NFYAQYKSIQPWL 361
Y QY+SI+PWL
Sbjct: 131 GLYKQYESIEPWL 143
>gi|381167924|ref|ZP_09877129.1| succinate dehydrogenase, Fe-S protein [Phaeospirillum molischianum
DSM 120]
gi|380683000|emb|CCG41941.1| succinate dehydrogenase, Fe-S protein [Phaeospirillum molischianum
DSM 120]
Length = 260
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 142/241 (58%), Gaps = 50/241 (20%)
Query: 111 SSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDAND 156
+ A PA + K F IYR++PD P + +++DL+ N+ID+
Sbjct: 17 TVAAPAGA-TRVKRFNIYRYDPDS-GANPRLDTFEIDLDACGPMVLDALLKIKNEIDSTL 74
Query: 157 KVSK----------------------------------IYPLPHMYVVKDLVPDMNNFYA 182
+ IYPLPHM VVKDLV D++ YA
Sbjct: 75 TFRRSCREGICGSCAMNIGGANTLACLKPIADIEGDVAIYPLPHMPVVKDLVADLSVPYA 134
Query: 183 QYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGP 242
Q S++PW+Q +++ LQS ++R+ LDGL+ECILC CC TSCPSYWWNG++YLGP
Sbjct: 135 QLASVRPWMQTQSPTPPDSERLQSPEERELLDGLWECILCFCCQTSCPSYWWNGDRYLGP 194
Query: 243 AVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
AVL+QA RWI DSRDE T +RL+ L+DPF +YRCHTIMNCT+TCPKGLNP RAI IK
Sbjct: 195 AVLLQAARWIFDSRDEMTGERLDTLEDPFKLYRCHTIMNCTQTCPKGLNPARAIGAIKGK 254
Query: 303 L 303
L
Sbjct: 255 L 255
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE+D TLTFRRSCREGICGSCAMNIGG NTLAC+ I + IYPLP
Sbjct: 58 MVLDALLKIKNEIDSTLTFRRSCREGICGSCAMNIGGANTLACLKPIADIEGDVAIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLV D++ YAQ S++ PW
Sbjct: 118 HMPVVKDLVADLSVPYAQLASVR-----PW 142
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
IYPLPHM VVKDLV D++ YAQ S++PW+
Sbjct: 113 IYPLPHMPVVKDLVADLSVPYAQLASVRPWM 143
>gi|115522542|ref|YP_779453.1| succinate dehydrogenase iron-sulfur subunit [Rhodopseudomonas
palustris BisA53]
gi|115516489|gb|ABJ04473.1| succinate dehydrogenase subunit B [Rhodopseudomonas palustris
BisA53]
Length = 260
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KI PLPH VVKDLVPD+ NFYAQY SIQPWLQ ++ QS DR KLDGLYEC
Sbjct: 113 KINPLPHQPVVKDLVPDLTNFYAQYASIQPWLQTITPT-PQKEWRQSHADRSKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +++LGPA L+QA RW+ DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIK 300
MNC + CPKGLNP AIA +K
Sbjct: 232 MNCAKACPKGLNPSEAIANLK 252
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 8/115 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
MVLD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC +D KI PL
Sbjct: 58 MVLDGLIWIKNNVDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDEVKVGAVKINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAV 114
PH VVKDLVPD+ NFYAQY SIQ PW L T+T + ++ S A S +
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIQ-----PW--LQTITPTPQKEWRQSHADRSKL 165
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 313 GLDTAALHKIDANDKVS--KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K KV KI PLPH VVKDLVPD+ NFYAQY SIQPWL
Sbjct: 94 GENTLACTKAMDEVKVGAVKINPLPHQPVVKDLVPDLTNFYAQYASIQPWL 144
>gi|75676985|ref|YP_319406.1| succinate dehydrogenase iron-sulfur subunit [Nitrobacter
winogradskyi Nb-255]
gi|74421855|gb|ABA06054.1| succinate dehydrogenase subunit B [Nitrobacter winogradskyi Nb-255]
Length = 260
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 136/230 (59%), Gaps = 51/230 (22%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------------------------- 150
+ + F +YRWNPD DE P + + VDL+
Sbjct: 25 TETREFKVYRWNPDD-DENPRVDTFHVDLHECGPRVLDGLIWIKDHIDPTLTFRRSCREG 83
Query: 151 -------KIDANDKVS-------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
I+ + ++ K+ PLPH VVKDLVPD+ NFYAQY SI+PW
Sbjct: 84 VCGSCAMNINGQNTLACTQSLHDIPGDAVKVNPLPHQPVVKDLVPDLTNFYAQYASIEPW 143
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
L + ++ QS +DR+KLDGLYECILCACCST+CPSYWWN +++LGPA L+QA R
Sbjct: 144 L-KTATPTPQKEWRQSREDREKLDGLYECILCACCSTACPSYWWNSDRFLGPAALLQAAR 202
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
W+ DSRDE T +RL+ L+DPF +YRCHTI+NCT+ CPK LNP AIA +K
Sbjct: 203 WVTDSRDEATGERLDYLEDPFRLYRCHTILNCTKACPKSLNPAEAIATLK 252
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPLP 60
VLD LI IK+ +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D K+ PLP
Sbjct: 59 VLDGLIWIKDHIDPTLTFRRSCREGVCGSCAMNINGQNTLACTQSLHDIPGDAVKVNPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAK 99
H VVKDLVPD+ NFYAQY SI+ PW T T +
Sbjct: 119 HQPVVKDLVPDLTNFYAQYASIE-----PWLKTATPTPQ 152
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T +LH I + K+ PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TQSLHDIPGD--AVKVNPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|85714480|ref|ZP_01045468.1| succinate dehydrogenase [Nitrobacter sp. Nb-311A]
gi|85698927|gb|EAQ36796.1| succinate dehydrogenase [Nitrobacter sp. Nb-311A]
Length = 260
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 133/230 (57%), Gaps = 51/230 (22%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------ 149
+ + F +YRWNPD DE P + + VD++
Sbjct: 25 TETREFKVYRWNPDD-DENPRIDTFHVDVHECGPRVLDGLIWIKDHIDPTLTFRRSCREG 83
Query: 150 -------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW 190
+ D + KI PLPH VVKDLVPD+ NFYAQY SI+PW
Sbjct: 84 VCGSCAMNINGQNTLACTKSMHDVSGDAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPW 143
Query: 191 LQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYR 250
L + ++ QS +DR KLDGLYECILCACCST+CPSYWWN +++LGPA L+QA R
Sbjct: 144 L-KTTTPTPQKEWRQSREDRAKLDGLYECILCACCSTACPSYWWNSDRFLGPAALLQAAR 202
Query: 251 WIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
W+ DSRDE T +RL+ L+DPF +YRCHTI+NCT+ CPK LNP AIA +K
Sbjct: 203 WVTDSRDEATGERLDYLEDPFRLYRCHTILNCTKACPKSLNPAEAIATLK 252
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 6/90 (6%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPLP 60
VLD LI IK+ +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D + KI PLP
Sbjct: 59 VLDGLIWIKDHIDPTLTFRRSCREGVCGSCAMNINGQNTLACTKSMHDVSGDAVKINPLP 118
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H VVKDLVPD+ NFYAQY SI+ PW
Sbjct: 119 HQPVVKDLVPDLTNFYAQYASIE-----PW 143
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T ++H D + KI PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TKSMH--DVSGDAVKINPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|254418480|ref|ZP_05032204.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brevundimonas sp. BAL3]
gi|196184657|gb|EDX79633.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brevundimonas sp. BAL3]
Length = 265
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDLV D++ FYAQY SIQP+LQ D+ + + LQ+ +R+KLDGLYECI
Sbjct: 114 IAPLPHQPVVKDLVTDLSLFYAQYDSIQPYLQSDEPD-PEKERLQTPAEREKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN E+YLGPA L+Q+YRWI DSRD+ T RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNQEEYLGPAALLQSYRWISDSRDDATQKRLDDLEDPFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
NC + CPKGLNP +AIAE KKL+ +K
Sbjct: 233 NCAQVCPKGLNPAKAIAETKKLMVAPSRK 261
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALI IKN +DPTL+FRRSCREGICGSC+MNI G NTLAC D + + I PL
Sbjct: 58 MLLDALIHIKNTIDPTLSFRRSCREGICGSCSMNIDGRNTLACTKGWDECESHNITIAPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH VVKDLV D++ FYAQY SIQ +L
Sbjct: 118 PHQPVVKDLVTDLSLFYAQYDSIQPYL 144
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G D H I I PLPH VVKDLV D++ FYAQY SIQP+L
Sbjct: 103 GWDECESHNI-------TIAPLPHQPVVKDLVTDLSLFYAQYDSIQPYL 144
>gi|156086096|ref|XP_001610457.1| succinate dehydrogenase iron-sulfur subunit [Babesia bovis T2Bo]
gi|154797710|gb|EDO06889.1| succinate dehydrogenase iron-sulfur subunit, putative [Babesia
bovis]
Length = 281
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 136/228 (59%), Gaps = 52/228 (22%)
Query: 124 TFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVSK--------- 160
TF+++R++P+ ++P MQ YKVD + N+ D+ +
Sbjct: 22 TFSVFRYSPES-GKRPRMQSYKVDTAACGPMILDALIKIKNEQDSTLSFRRSCREGICGS 80
Query: 161 ----------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
I PLP MYV++DLV DM NFY QY+++QPWL+
Sbjct: 81 CAMNVNGENCLACLRSIESCTNQGNSVEIQPLPGMYVLRDLVADMTNFYEQYRTVQPWLK 140
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
R G A++LQS +DR LDG+YECILCACC+TSCPSYWWN E Y+GPA LMQAYRWI
Sbjct: 141 RKTPKSGEAEFLQSREDRALLDGMYECILCACCTTSCPSYWWNPEHYIGPAALMQAYRWI 200
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
DSRDE T +R+ + D +YRCH I+NCTR CPKGL+P +AI+++K
Sbjct: 201 EDSRDEYTVERMVDVNDSMKLYRCHGILNCTRACPKGLDPAKAISKLK 248
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 98/176 (55%), Gaps = 31/176 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA---NDKVSKIY 57
M+LDALIKIKNE D TL+FRRSCREGICGSCAMN+ G N LAC+ I++ +I
Sbjct: 51 MILDALIKIKNEQDSTLSFRRSCREGICGSCAMNVNGENCLACLRSIESCTNQGNSVEIQ 110
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNIRSFQ--------- 105
PLP MYV++DLV DM NFY QY+++Q PW K + A+ ++S +
Sbjct: 111 PLPGMYVLRDLVADMTNFYEQYRTVQ-----PWLKRKTPKSGEAEFLQSREDRALLDGMY 165
Query: 106 ---LSAAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYKVDLNNKI 152
L A +++ P+ P Y YRW D DE E VD+N+ +
Sbjct: 166 ECILCACCTTSCPSYWWNPEHYIGPAALMQAYRWIEDSRDEYTV--ERMVDVNDSM 219
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+I PLP MYV++DLV DM NFY QY+++QPWL R
Sbjct: 108 EIQPLPGMYVLRDLVADMTNFYEQYRTVQPWLKR 141
>gi|114571383|ref|YP_758063.1| succinate dehydrogenase iron-sulfur subunit [Maricaulis maris
MCS10]
gi|114341845|gb|ABI67125.1| succinate dehydrogenase subunit B [Maricaulis maris MCS10]
Length = 259
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 140/229 (61%), Gaps = 50/229 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
+TF +YR+NP+ DE P+ YKVD++ N +DA+ +
Sbjct: 28 RTFKVYRYNPET-DETPSWDTYKVDMDDCGPMVLDALLWIKNNVDASLAFRRSCREGVCG 86
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
I PLPH VV+DL+PD+ FYAQ+ +++P+L+ D
Sbjct: 87 SCSMNIGGRNTIACTSGIDEYKGDITISPLPHQPVVRDLIPDLTQFYAQHAAVKPYLKTD 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++ QS + R+KLDGLYECI+CA CST+CPSYWWNG+KY+GPA L+QAYRW+ D
Sbjct: 147 TP-APEKEWKQSPEQREKLDGLYECIMCASCSTACPSYWWNGDKYMGPAALLQAYRWLAD 205
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRDE T +RL++L DPF +YRCHTIMNC + CPKGLNP AI EIK+++
Sbjct: 206 SRDEATGERLDELNDPFKLYRCHTIMNCAQVCPKGLNPAEAIGEIKQMM 254
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 65/86 (75%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+ IKN +D +L FRRSCREG+CGSC+MNIGG NT+AC S ID I PLP
Sbjct: 58 MVLDALLWIKNNVDASLAFRRSCREGVCGSCSMNIGGRNTIACTSGIDEYKGDITISPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H VV+DL+PD+ FYAQ+ +++ +L
Sbjct: 118 HQPVVRDLIPDLTQFYAQHAAVKPYL 143
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A ID I PLPH VV+DL+PD+ FYAQ+ +++P+L
Sbjct: 99 ACTSGIDEYKGDITISPLPHQPVVRDLIPDLTQFYAQHAAVKPYL 143
>gi|209883447|ref|YP_002287304.1| succinate dehydrogenase iron-sulfur subunit [Oligotropha
carboxidovorans OM5]
gi|337739472|ref|YP_004631200.1| succinate dehydrogenase iron-sulfur subunit SdhB [Oligotropha
carboxidovorans OM5]
gi|386028491|ref|YP_005949266.1| succinate dehydrogenase iron-sulfur subunit SdhB [Oligotropha
carboxidovorans OM4]
gi|209871643|gb|ACI91439.1| succinate dehydrogenase iron-sulfur subunit [Oligotropha
carboxidovorans OM5]
gi|336093559|gb|AEI01385.1| succinate dehydrogenase iron-sulfur subunit SdhB [Oligotropha
carboxidovorans OM4]
gi|336097136|gb|AEI04959.1| succinate dehydrogenase iron-sulfur subunit SdhB [Oligotropha
carboxidovorans OM5]
Length = 260
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDLVPD+ NFYAQY SI+PWL ++ QS+++R++LDGLYECI
Sbjct: 114 IRPLPHQPVVKDLVPDLTNFYAQYASIEPWLHTTTAT-PQKEWRQSIEERRELDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN +++LGPA L+ A RW+ DSRDE T +RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNSDRFLGPAALLAADRWVKDSRDEATGERLDNLEDPFRLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NCT+ CPKGLNP +AIA++K+ L
Sbjct: 233 NCTKACPKGLNPSKAIADLKRKL 255
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 73/108 (67%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACI-SKIDANDKVSKIYPL 59
M+LD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + D I PL
Sbjct: 58 MILDGLIWIKNHIDPTLTFRRSCREGVCGSCAMNIDGQNTLACTCAASDVASGPITIRPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PH VVKDLVPD+ NFYAQY SI+ PW L T TA + ++ S
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LHTTTATPQKEWRQS 158
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 26/31 (83%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 114 IRPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|299133113|ref|ZP_07026308.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Afipia sp. 1NLS2]
gi|298593250|gb|EFI53450.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Afipia sp. 1NLS2]
Length = 260
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDLVPD+ NFYAQY SI+PWL ++ QS+ +R KLDGLYECI
Sbjct: 114 IRPLPHQPVVKDLVPDLTNFYAQYASIEPWLHTTTAT-PQKEWRQSIQERSKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN ++YLGPA L+QA RW+ DSRDE T RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNSDRYLGPAALLQADRWVNDSRDEATGARLDNLEDPFRLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIK 300
NCT+ CPKGLNP +AIA++K
Sbjct: 233 NCTKACPKGLNPAKAIADLK 252
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 76/115 (66%), Gaps = 8/115 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC ++ D I PL
Sbjct: 58 MILDGLIWIKNHVDPTLTFRRSCREGVCGSCAMNIDGQNTLACTRAMNEVDSGPITIRPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAV 114
PH VVKDLVPD+ NFYAQY SI+ PW L T TA + ++ S S +
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LHTTTATPQKEWRQSIQERSKL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T A++++D+ I PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRAMNEVDSGPIT--IRPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|302381550|ref|YP_003817373.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brevundimonas subvibrioides ATCC 15264]
gi|302192178|gb|ADK99749.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brevundimonas subvibrioides ATCC 15264]
Length = 265
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLPH VVKDLV D+ FYAQY SI+P+LQ D + + LQS +DR KLDGLYECI
Sbjct: 114 INPLPHQPVVKDLVTDLTLFYAQYDSIKPYLQSDDPD-PTTERLQSPEDRAKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN +YLGPA L+Q+YRWI DSRD++T RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNQTEYLGPAALLQSYRWISDSRDDQTQARLDDLEDPFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC + CPKGLNP +AIAE KKL+
Sbjct: 233 NCAQVCPKGLNPAKAIAETKKLM 255
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LDALI IK+ +DPTL FRRSCREGICGSC+MNI G NTLAC D + I PL
Sbjct: 58 MLLDALIHIKSTIDPTLAFRRSCREGICGSCSMNIDGRNTLACTKGWDECSSSTIAINPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH VVKDLV D+ FYAQY SI+ +L
Sbjct: 118 PHQPVVKDLVTDLTLFYAQYDSIKPYL 144
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPH VVKDLV D+ FYAQY SI+P+L
Sbjct: 114 INPLPHQPVVKDLVTDLTLFYAQYDSIKPYL 144
>gi|297797537|ref|XP_002866653.1| succinate dehydrogenase 2-3 [Arabidopsis lyrata subsp. lyrata]
gi|297312488|gb|EFH42912.1| succinate dehydrogenase 2-3 [Arabidopsis lyrata subsp. lyrata]
Length = 309
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 150/269 (55%), Gaps = 58/269 (21%)
Query: 87 GGPWKIL-GTLTAKNIRSFQLSAAASSAVPAEKPAKYKT----FAIYRWNPDKPDEKPTM 141
GG + +L G A+++ L S + EK ++K F IYRWNPDKP+ KP +
Sbjct: 29 GGDFPVLKGQKAAQDLSKDTLK---SHEITKEKEGQHKEAKKEFKIYRWNPDKPNSKPFL 85
Query: 142 QEYKVDLNN----------KIDANDKVSKIY----------------------------- 162
Q + VDL++ KI A + S Y
Sbjct: 86 QSFFVDLSSCGPMVLDVLQKIKAEEDASLSYRRSCREGICGSCSMNIDGTNTVACLKPIN 145
Query: 163 ----------PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
PLPHMYV+KDLV D+ NFY QYK+++PWL+ K ++ QS DRKK
Sbjct: 146 PNSSKPTIITPLPHMYVIKDLVVDLTNFYQQYKAMEPWLKTRKPPKDGREHRQSPKDRKK 205
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL-KDPF 271
LDGLYECILCACC+TSCPSYWWN E++ GPA L+QAYRWI DSRDE +RL + ++
Sbjct: 206 LDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEFGEERLQAITENQT 265
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
VYRC I NCT TCPKGLNP AI ++K
Sbjct: 266 KVYRCRAIKNCTATCPKGLNPASAILKMK 294
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L KIK E D +L++RRSCREGICGSC+MNI G NT+AC+ I+ N K + I PL
Sbjct: 98 MVLDVLQKIKAEEDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNSSKPTIITPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYV+KDLV D+ NFY QYK+++ PW
Sbjct: 158 PHMYVIKDLVVDLTNFYQQYKAME-----PW 183
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAA-LHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A L I+ N K + I PLPHMYV+KDLV D+ NFY QYK+++PWL
Sbjct: 134 GTNTVACLKPINPNSSKPTIITPLPHMYVIKDLVVDLTNFYQQYKAMEPWL 184
>gi|261067|gb|AAB24366.1| succinate-ubiquinone oxidoreductase complex II iron-sulfur subunit
[Caenorhabditis elegans]
Length = 161
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLD 208
KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+Q+ +G Q QS+
Sbjct: 24 KIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVA 83
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ +RL+++
Sbjct: 84 ERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWVIDSRDDYATERLHRMH 143
Query: 269 DPFSVYRCHTIMNCTRTC 286
D FS ++CHT+MNCTR C
Sbjct: 144 DSFSAFKCHTMMNCTRIC 161
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 90/159 (56%), Gaps = 35/159 (22%)
Query: 23 CREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 81
CREG+CGSCAMNIGG NTLACI KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY S
Sbjct: 1 CREGMCGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYAS 60
Query: 82 IQRHLGGPW---KILGTLTAKNIR-------------SFQLSAAASSAVPAEKPAKYKTF 125
IQ PW K TL K + L A S++ P+
Sbjct: 61 IQ-----PWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPS--------- 106
Query: 126 AIYRWNPDK-PDEKPTMQEYKVDLNNKID-ANDKVSKIY 162
Y WN DK MQ Y+ ++++ D A +++ +++
Sbjct: 107 --YWWNADKYLGPAVLMQAYRWVIDSRDDYATERLHRMH 143
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 300 KKLLSGLVKKDKPGLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI 357
++ + G + G +T A + KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SI
Sbjct: 2 REGMCGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASI 61
Query: 358 QPWLPR 363
QPW+ +
Sbjct: 62 QPWIQK 67
>gi|367472822|ref|ZP_09472397.1| succinate dehydrogenase, FeS subunit [Bradyrhizobium sp. ORS 285]
gi|365274901|emb|CCD84865.1| succinate dehydrogenase, FeS subunit [Bradyrhizobium sp. ORS 285]
Length = 258
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 137/242 (56%), Gaps = 50/242 (20%)
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDA- 154
A + P + + F IYRW+PD P + Y VD + N ID
Sbjct: 14 AGKSWPKPQSVTLREFRIYRWDPDV-GGNPRLDSYHVDTSDCGPMVLDGLIWIKNNIDPT 72
Query: 155 ---------------------------------NDKVSKIYPLPHMYVVKDLVPDMNNFY 181
+D ++ PLPH VVKDLVPD+ NFY
Sbjct: 73 LTFRRSCREGICGSCSMNINGQNTLACTKSMSDHDGAVQLLPLPHQPVVKDLVPDLTNFY 132
Query: 182 AQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLG 241
AQ I+PWLQ K ++ QS +DR KL+GLYECILCACCSTSCPSYWWN +++LG
Sbjct: 133 AQLSVIEPWLQ-TKTPTPQKEWRQSEEDRDKLNGLYECILCACCSTSCPSYWWNSQRFLG 191
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PA L+QA RWI DSRDE T +RL+ L+DPF +YRCHTI+NC + CPKGLNPG AI+E++
Sbjct: 192 PAALIQAARWINDSRDEATGERLDILEDPFRLYRCHTILNCAKACPKGLNPGEAISELRM 251
Query: 302 LL 303
L
Sbjct: 252 KL 253
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LI IKN +DPTLTFRRSCREGICGSC+MNI G NTLAC + +D ++ PLP
Sbjct: 57 MVLDGLIWIKNNIDPTLTFRRSCREGICGSCSMNINGQNTLACTKSMSDHDGAVQLLPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H VVKDLVPD+ NFYAQ I+ PW
Sbjct: 117 HQPVVKDLVPDLTNFYAQLSVIE-----PW 141
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K + +D ++ PLPH VVKDLVPD+ NFYAQ I+PWL
Sbjct: 93 GQNTLACTKSMSDHDGAVQLLPLPHQPVVKDLVPDLTNFYAQLSVIEPWL 142
>gi|421597415|ref|ZP_16041039.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp.
CCGE-LA001]
gi|404270474|gb|EJZ34530.1| succinate dehydrogenase iron-sulfur subunit [Bradyrhizobium sp.
CCGE-LA001]
Length = 261
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 135/237 (56%), Gaps = 53/237 (22%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDA------ 154
P + + F +YRWNPD P + Y VD + N +D+
Sbjct: 19 PKPRSESLREFHVYRWNPDD-GRNPRLDTYFVDSTDCGPMVLDGLIWIKNNVDSTLTFRR 77
Query: 155 --------------------------NDKVS-----KIYPLPHMYVVKDLVPDMNNFYAQ 183
+D +S ++ PLPH VVKDLVPD+ NFYAQ
Sbjct: 78 SCREGVCGSCSMNIAGQNTLACTKSMSDDISEGEPLRVLPLPHQPVVKDLVPDLTNFYAQ 137
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
++PWLQ ++ QS +DR KLDGLYECILCACCSTSCPSYWWN E++LGPA
Sbjct: 138 LALVEPWLQTTSPTPPK-EWRQSHEDRAKLDGLYECILCACCSTSCPSYWWNSERFLGPA 196
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
L+QA RWI DSRDE T +RL+ L+DPF +YRCHTI+NC + CPKGLNPG AIA ++
Sbjct: 197 ALIQAARWINDSRDEATGERLDMLEDPFRIYRCHTILNCAKACPKGLNPGEAIAALR 253
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 12/95 (12%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-----K 55
MVLD LI IKN +D TLTFRRSCREG+CGSC+MNI G NTLAC + +D +S +
Sbjct: 57 MVLDGLIWIKNNVDSTLTFRRSCREGVCGSCSMNIAGQNTLACTKSM--SDDISEGEPLR 114
Query: 56 IYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
+ PLPH VVKDLVPD+ NFYAQ ++ PW
Sbjct: 115 VLPLPHQPVVKDLVPDLTNFYAQLALVE-----PW 144
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 300 KKLLSGLVKKDKPGLDTAALHKIDAND----KVSKIYPLPHMYVVKDLVPDMNNFYAQYK 355
++ + G + G +T A K ++D + ++ PLPH VVKDLVPD+ NFYAQ
Sbjct: 80 REGVCGSCSMNIAGQNTLACTKSMSDDISEGEPLRVLPLPHQPVVKDLVPDLTNFYAQLA 139
Query: 356 SIQPWL 361
++PWL
Sbjct: 140 LVEPWL 145
>gi|403412815|emb|CCL99515.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 145/259 (55%), Gaps = 66/259 (25%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------ 149
L + R+F S+A + AVP EKP K F IYRWNPD+P KPT+Q Y VDLN
Sbjct: 15 LLRSSFRTFASSSARNQAVPTEKPVLNKEFKIYRWNPDEPAAKPTLQTYTVDLNQCGPMV 74
Query: 150 --------NKIDAN-----------------------------------DKVSKIYPLPH 166
N++D K SKIYPLPH
Sbjct: 75 LDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIERDTSKDSKIYPLPH 134
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCS 226
MY+VKDLVPD+ FY QYKSI+P+L+ D + ++++LQS +DR+KLDG
Sbjct: 135 MYIVKDLVPDLTLFYKQYKSIEPYLKNDNPPV-DSEHLQSPEDRRKLDG----------- 182
Query: 227 TSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTC 286
YWWN ++YLGPA LM AYRW+ DSRD +A R +L++ S+YRCHTI NC RTC
Sbjct: 183 -----YWWNQDEYLGPATLMAAYRWMADSRDTYSAQRKEKLQNEMSLYRCHTIFNCARTC 237
Query: 287 PKGLNPGRAIAEIKKLLSG 305
PKGLNP AIA+IK L+
Sbjct: 238 PKGLNPAAAIAKIKLELAA 256
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+ +I+ + K SKIYPL
Sbjct: 73 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIERDTSKDSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMY+VKDLVPD+ FY QYKSI+ +L
Sbjct: 133 PHMYIVKDLVPDLTLFYKQYKSIEPYL 159
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L +I+ + K SKIYPLPHMY+VKDLVPD+ FY QYKSI+P+L
Sbjct: 114 ACLCRIERDTSKDSKIYPLPHMYIVKDLVPDLTLFYKQYKSIEPYL 159
>gi|414164735|ref|ZP_11420982.1| succinate dehydrogenase iron-sulfur subunit [Afipia felis ATCC
53690]
gi|410882515|gb|EKS30355.1| succinate dehydrogenase iron-sulfur subunit [Afipia felis ATCC
53690]
Length = 260
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
+ PLPH VVKDLVPD+ NFYAQY SI+PWL ++ QS+++R KLDGLYECI
Sbjct: 114 VRPLPHQPVVKDLVPDLTNFYAQYASIEPWLHTSTAT-PQKEWRQSIEERSKLDGLYECI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN +++LGPA L+ A RW+ DSRDE T +RL+ L+DPF +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNSDRFLGPAALLAADRWVKDSRDEATGERLDNLEDPFRLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC + CPKGLNP +AIA++K L
Sbjct: 233 NCAKACPKGLNPSKAIADLKAKL 255
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
M+LD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC + + + PL
Sbjct: 58 MILDGLIWIKNHVDPTLTFRRSCREGVCGSCAMNIDGQNTLACTRAMSEVESGPITVRPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASS 112
PH VVKDLVPD+ NFYAQY SI+ PW L T TA + ++ S S
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LHTSTATPQKEWRQSIEERS 163
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
+ PLPH VVKDLVPD+ NFYAQY SI+PWL S
Sbjct: 114 VRPLPHQPVVKDLVPDLTNFYAQYASIEPWLHTS 147
>gi|338972606|ref|ZP_08627978.1| succinate dehydrogenase iron-sulfur protein [Bradyrhizobiaceae
bacterium SG-6C]
gi|414169553|ref|ZP_11425286.1| succinate dehydrogenase iron-sulfur subunit [Afipia clevelandensis
ATCC 49720]
gi|338234155|gb|EGP09273.1| succinate dehydrogenase iron-sulfur protein [Bradyrhizobiaceae
bacterium SG-6C]
gi|410885285|gb|EKS33100.1| succinate dehydrogenase iron-sulfur subunit [Afipia clevelandensis
ATCC 49720]
Length = 262
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 134/227 (59%), Gaps = 51/227 (22%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID--------------- 153
+ + IYRWNPD + P++ Y VD + N ID
Sbjct: 30 REYKIYRWNPDD-GKNPSIDTYYVDTADCGPMILDGLIWIKNHIDPTLTFRRSCREGVCG 88
Query: 154 ----------------ANDKVS----KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
A D+V K+ PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 89 SCAMNIDGQNTLACTRAMDEVQAGPIKVNPLPHQPVVKDLVPDLTNFYAQYASIEPWLHT 148
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
++ QS +DR KLDGLYECILCACCSTSCPSYWWN +++LGPA L+ A RW+
Sbjct: 149 TTAT-PQKEWRQSPEDRAKLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLAADRWVK 207
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
DSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGLNP AIA++K
Sbjct: 208 DSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLNPSEAIADLK 254
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID-ANDKVSKIYPL 59
M+LD LI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC +D K+ PL
Sbjct: 60 MILDGLIWIKNHIDPTLTFRRSCREGVCGSCAMNIDGQNTLACTRAMDEVQAGPIKVNPL 119
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PH VVKDLVPD+ NFYAQY SI+ PW L T TA + ++ S
Sbjct: 120 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LHTTTATPQKEWRQS 160
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
K+ PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 115 KVNPLPHQPVVKDLVPDLTNFYAQYASIEPWL 146
>gi|365884356|ref|ZP_09423410.1| succinate dehydrogenase, FeS subunit [Bradyrhizobium sp. ORS 375]
gi|365287102|emb|CCD95941.1| succinate dehydrogenase, FeS subunit [Bradyrhizobium sp. ORS 375]
Length = 258
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 133/237 (56%), Gaps = 50/237 (21%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN----- 155
P K + F IYRW+PD P + Y VD + N +D
Sbjct: 19 PTPKSITLREFRIYRWDPDV-GGNPRLDSYHVDTFDCGPMVLDGLIWIKNNVDPTLTFRR 77
Query: 156 -----------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKS 186
D ++ PLPH VVKDLVPD+ NFYAQ
Sbjct: 78 SCREGICGSCSMNINGQNTLACTKSMSDQDGAVQLLPLPHQPVVKDLVPDLTNFYAQLSV 137
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLM 246
I+PWLQ ++ QS +DR KL+GLYECILCACCSTSCPSYWWN E++LGPA L+
Sbjct: 138 IEPWLQTTTPT-PQKEWRQSEEDRDKLNGLYECILCACCSTSCPSYWWNSERFLGPAALI 196
Query: 247 QAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
QA RWI DSRDE T +RL+ L+DPF +YRCHTI+NC + CPKGLNPG AI+E++ L
Sbjct: 197 QAARWINDSRDEATGERLDILEDPFRLYRCHTILNCAKACPKGLNPGEAISELRMKL 253
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD LI IKN +DPTLTFRRSCREGICGSC+MNI G NTLAC + D ++ PLP
Sbjct: 57 MVLDGLIWIKNNVDPTLTFRRSCREGICGSCSMNINGQNTLACTKSMSDQDGAVQLLPLP 116
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H VVKDLVPD+ NFYAQ I+ PW
Sbjct: 117 HQPVVKDLVPDLTNFYAQLSVIE-----PW 141
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K + D ++ PLPH VVKDLVPD+ NFYAQ I+PWL
Sbjct: 93 GQNTLACTKSMSDQDGAVQLLPLPHQPVVKDLVPDLTNFYAQLSVIEPWL 142
>gi|3851608|gb|AAC72370.1| succinate dehydrogenase Ip subunit [Bos taurus]
Length = 139
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 115/127 (90%), Gaps = 2/127 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 13 RIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIE 72
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 73 DREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 132
Query: 269 DPFSVYR 275
DPFS+YR
Sbjct: 133 DPFSLYR 139
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 24/137 (17%)
Query: 34 NIGGVNTLACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL------ 86
NI G NTLAC +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 1 NINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDES 60
Query: 87 -GGPWKILGTLTAK----NIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPT 140
GG + L ++ + + L A S++ P+ Y WN DK
Sbjct: 61 QGGKEQYLQSIEDREKLDGLYECILCACCSTSCPS-----------YWWNGDKYLGPAVL 109
Query: 141 MQEYKVDLNNKIDANDK 157
MQ Y+ ++++ D ++
Sbjct: 110 MQAYRWMIDSRDDFTEE 126
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 5 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 56
>gi|254455263|ref|ZP_05068692.1| succinate dehydrogenase iron-sulfur protein [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082265|gb|EDZ59691.1| succinate dehydrogenase iron-sulfur protein [Candidatus
Pelagibacter sp. HTCC7211]
Length = 259
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPH+ V +DL+ D++ Y QY+SI+PWL+ + + QS ++R KLDG YECI
Sbjct: 113 IYPLPHLKVKRDLIGDLDGLYKQYQSIEPWLKNNSTK-DTTEIFQSKEERAKLDGAYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CACCSTSCPSYWWNG+KYLGPAVL+QAYRWIIDSRDE+ RL ++ D +YRCHTI+
Sbjct: 172 MCACCSTSCPSYWWNGDKYLGPAVLLQAYRWIIDSRDEERKARLKKVADELKLYRCHTIL 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
NCT CPKGLNP +AIAEIKK+++
Sbjct: 232 NCTSACPKGLNPAKAIAEIKKMIA 255
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 86/166 (51%), Gaps = 27/166 (16%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLD L KIKNE+DPTL +RRSC G+CGSCAMN+GG N LAC + D IYPLPH
Sbjct: 59 VLDILNKIKNEIDPTLAYRRSCAHGVCGSCAMNMGGKNGLACTTPHAEIDGDIDIYPLPH 118
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ---------------L 106
+ V +DL+ D++ Y QY+SI+ PW + T FQ +
Sbjct: 119 LKVKRDLIGDLDGLYKQYQSIE-----PW-LKNNSTKDTTEIFQSKEERAKLDGAYECIM 172
Query: 107 SAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKV 146
A S++ P+ KY A+ YRW D DE+ + KV
Sbjct: 173 CACCSTSCPSYWWNGDKYLGPAVLLQAYRWIIDSRDEERKARLKKV 218
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ P + Y +D+ K D LN++K DP YR R+C
Sbjct: 33 YRWDPSTEENPRI--DTYEVDMDNCPSKVLDILNKIKNEIDPTLAYR--------RSCAH 82
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDTAALH-KIDANDKVSKIYPLPHMYVVKDLVPDM 347
G+ A+ + G K GL H +ID + IYPLPH+ V +DL+ D+
Sbjct: 83 GVCGSCAMN-----MGG-----KNGLACTTPHAEIDGD---IDIYPLPHLKVKRDLIGDL 129
Query: 348 NNFYAQYKSIQPWL 361
+ Y QY+SI+PWL
Sbjct: 130 DGLYKQYQSIEPWL 143
>gi|403220595|dbj|BAM38728.1| succinate dehydrogenase [Theileria orientalis strain Shintoku]
Length = 286
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 140/246 (56%), Gaps = 61/246 (24%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK---------- 160
F+++R+ P+ +KPTM+ Y VD N N++D+ +
Sbjct: 23 FSVFRYTPNS-KQKPTMKSYTVDTNDCGPMILDALIKIKNEMDSTLTFRRSCREGICGSC 81
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+ PLP MYV++DLVPD+ NFY QY+S++PWL+R
Sbjct: 82 AMNVNGENGLVCLMDIEKHTAKGKIEVQPLPGMYVLRDLVPDLTNFYEQYRSVEPWLKRK 141
Query: 195 KENIGNAQYLQSLDDRKKLDGLYE----------CILCACCSTSCPSYWWNGEKYLGPAV 244
G +Y QS +DR+KLDGLYE CILCACCSTSCPSYWWN E YLGPA
Sbjct: 142 SPKEGEKEYHQSREDRQKLDGLYEVSGACDSDVQCILCACCSTSCPSYWWNPEHYLGPAA 201
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
LMQAYRW+ DSRDE T +RL + D +YRCH IMNCT+ CPKGL+P AI ++K+ ++
Sbjct: 202 LMQAYRWVADSRDEYTTERLVGVNDTMKLYRCHGIMNCTKVCPKGLDPAGAIEKLKRHIA 261
Query: 305 GLVKKD 310
V +D
Sbjct: 262 ENVSED 267
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKI--YP 58
M+LDALIKIKNEMD TLTFRRSCREGICGSCAMN+ G N L C+ I+ + KI P
Sbjct: 51 MILDALIKIKNEMDSTLTFRRSCREGICGSCAMNVNGENGLVCLMDIEKHTAKGKIEVQP 110
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LP MYV++DLVPD+ NFY QY+S++ PW
Sbjct: 111 LPGMYVLRDLVPDLTNFYEQYRSVE-----PW 137
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 319 LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
+ K A K+ ++ PLP MYV++DLVPD+ NFY QY+S++PWL R
Sbjct: 97 IEKHTAKGKI-EVQPLPGMYVLRDLVPDLTNFYEQYRSVEPWLKR 140
>gi|296445356|ref|ZP_06887314.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylosinus trichosporium OB3b]
gi|296257117|gb|EFH04186.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylosinus trichosporium OB3b]
Length = 262
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D + KIYPLPHM VVKDLVPD+ +FYAQ+ +I+PWLQ + + LQS DR
Sbjct: 104 MDEIEGAIKIYPLPHMPVVKDLVPDLTDFYAQHAAIEPWLQASSPD-PEKERLQSPQDRH 162
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCSTSCPSYWWN +++LGPA L+QA RW+ DSRDE T R+ + D F
Sbjct: 163 KLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQAQRWVADSRDEATETRVAYVDDAF 222
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+YRCHTI+NC+ CPKGL PG AIAE+K L
Sbjct: 223 RLYRCHTILNCSNACPKGLRPGTAIAELKNL 253
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA++ IKN +DPTLTFRRSCREGICGSC+MNI G+NTLAC +D + KIYPLP
Sbjct: 58 MVLDAILWIKNRIDPTLTFRRSCREGICGSCSMNIDGLNTLACTKGMDEIEGAIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ +FYAQ+ +I+ PW
Sbjct: 118 HMPVVKDLVPDLTDFYAQHAAIE-----PW 142
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + GL+T A K +D + KIYPLPHM VVKDLVPD+ +FYAQ+ +I+
Sbjct: 81 REGICGSCSMNIDGLNTLACTKGMDEIEGAIKIYPLPHMPVVKDLVPDLTDFYAQHAAIE 140
Query: 359 PWLPRS 364
PWL S
Sbjct: 141 PWLQAS 146
>gi|11465623|ref|NP_049294.1| succinate:cytochrome c oxidoreductase subunit 2 [Porphyra purpurea]
gi|4106930|gb|AAD03097.1| succinate:cytochrome c oxidoreductase subunit 2 [Porphyra purpurea]
Length = 249
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 115/149 (77%), Gaps = 2/149 (1%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
I N + IYPLPHMY++KDLVPD++NF++QYK I+PWL + ++YLQS DR
Sbjct: 97 IKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKPWLINNVPK--KSEYLQSEKDRS 154
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+G+YECILCACCS SCPSYWWN +KYLGPA+L+QAYRW+ DSRD +RL L
Sbjct: 155 ELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWLADSRDTNAKERLKLLGGKS 214
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+++CHTIMNC+RTCPK LNPG+AIA IK
Sbjct: 215 KLFKCHTIMNCSRTCPKSLNPGKAIASIK 243
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 73/92 (79%), Gaps = 5/92 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+E D +L FRRSCREGICGSC+MNI G+NTLAC+ I N + IYPLP
Sbjct: 51 MILDALIKIKDEQDSSLAFRRSCREGICGSCSMNIDGINTLACLKPIKTNANIITIYPLP 110
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
HMY++KDLVPD++NF++QYK I+ PW I
Sbjct: 111 HMYIIKDLVPDLSNFFSQYKYIK-----PWLI 137
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G++T A L I N + IYPLPHMY++KDLVPD++NF++QYK I+PWL
Sbjct: 77 ICGSCSMNIDGINTLACLKPIKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKPWL 136
>gi|3851610|gb|AAC72371.1| succinate dehydrogenase Ip subunit [Mus musculus]
Length = 139
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/129 (74%), Positives = 115/129 (89%), Gaps = 2/129 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS
Sbjct: 11 TRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQS 70
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +
Sbjct: 71 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAK 130
Query: 267 LKDPFSVYR 275
L+DPFSVYR
Sbjct: 131 LQDPFSVYR 139
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Query: 34 NIGGVNTLACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
N G NTLAC +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 1 NFNGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYL 54
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 5 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 56
>gi|430813975|emb|CCJ28719.1| unnamed protein product [Pneumocystis jirovecii]
Length = 151
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
Query: 169 VVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTS 228
+ DLVPD+ +FY QYKSIQP+LQ + + LQS +RKKLDGLYECILCACCSTS
Sbjct: 16 IFIDLVPDLTHFYKQYKSIQPYLQH--KEFPEKEILQSQKNRKKLDGLYECILCACCSTS 73
Query: 229 CPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
CPSYWWN E+YLGPAVLMQAYRW+IDSRD+ T +R +L++ S+YRCHTIMNC RTCPK
Sbjct: 74 CPSYWWNSEEYLGPAVLMQAYRWLIDSRDDATQERKEKLQNSMSLYRCHTIMNCARTCPK 133
Query: 289 GLNPGRAIAEIKKLLS 304
GLNPG+AIAEIKK ++
Sbjct: 134 GLNPGKAIAEIKKSMA 149
>gi|1706425|sp|P80477.1|DHSB_PORPU RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit; AltName: Full=Iron-sulfur subunit of complex
II; Short=Ip
Length = 239
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 115/149 (77%), Gaps = 2/149 (1%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
I N + IYPLPHMY++KDLVPD++NF++QYK I+PWL + ++YLQS DR
Sbjct: 87 IKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKPWLINNVPK--KSEYLQSEKDRS 144
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+G+YECILCACCS SCPSYWWN +KYLGPA+L+QAYRW+ DSRD +RL L
Sbjct: 145 ELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWLADSRDTNAKERLKLLGGKS 204
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+++CHTIMNC+RTCPK LNPG+AIA IK
Sbjct: 205 KLFKCHTIMNCSRTCPKSLNPGKAIASIK 233
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 73/92 (79%), Gaps = 5/92 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+E D +L FRRSCREGICGSC+MNI G+NTLAC+ I N + IYPLP
Sbjct: 41 MILDALIKIKDEQDSSLAFRRSCREGICGSCSMNIDGINTLACLKPIKTNANIITIYPLP 100
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
HMY++KDLVPD++NF++QYK I+ PW I
Sbjct: 101 HMYIIKDLVPDLSNFFSQYKYIK-----PWLI 127
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G++T A L I N + IYPLPHMY++KDLVPD++NF++QYK I+PWL
Sbjct: 67 ICGSCSMNIDGINTLACLKPIKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKPWL 126
>gi|414176872|ref|ZP_11431101.1| succinate dehydrogenase iron-sulfur subunit [Afipia broomeae ATCC
49717]
gi|410887025|gb|EKS34837.1| succinate dehydrogenase iron-sulfur subunit [Afipia broomeae ATCC
49717]
Length = 260
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+ PLPH VVKDLVPD+ NFYAQY SI+PWL ++ QS +DR KLDGLYEC
Sbjct: 113 KVNPLPHQPVVKDLVPDLTNFYAQYASIEPWLHTTTAT-PQKEWRQSPEDRAKLDGLYEC 171
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +++LGPA L+ A RW+ DSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 172 ILCACCSTSCPSYWWNSDRFLGPAALLAADRWVKDSRDEATGERLDNLEDPFRLYRCHTI 231
Query: 280 MNCTRTCPKGLNPGRAIAEIK 300
MNC + CPKGLNP AIA++K
Sbjct: 232 MNCAKACPKGLNPSEAIADLK 252
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 76/108 (70%), Gaps = 8/108 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
M+LDALI IKN +DPTLTFRRSCREG+CGSCAMNI G NTLAC +D + K+ PL
Sbjct: 58 MILDALIWIKNNVDPTLTFRRSCREGVCGSCAMNIDGQNTLACTRAMDEVEAGPIKVNPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
PH VVKDLVPD+ NFYAQY SI+ PW L T TA + ++ S
Sbjct: 118 PHQPVVKDLVPDLTNFYAQYASIE-----PW--LHTTTATPQKEWRQS 158
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 316 TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
T A+ +++A K+ PLPH VVKDLVPD+ NFYAQY SI+PWL
Sbjct: 101 TRAMDEVEAGP--IKVNPLPHQPVVKDLVPDLTNFYAQYASIEPWL 144
>gi|404474478|ref|YP_006665871.1| succinate:cytochrome c oxidoreductase subunit 2 (mitochondrion)
[Porphyra umbilicalis]
gi|378554605|gb|AFC17774.1| succinate:cytochrome c oxidoreductase subunit 2 (mitochondrion)
[Porphyra umbilicalis]
Length = 257
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 112/139 (80%), Gaps = 2/139 (1%)
Query: 162 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECIL 221
YPLPHMY++KDLVPD++NFY+QYK I+PWL ++YLQS DR +L+G+YECIL
Sbjct: 109 YPLPHMYIIKDLVPDLSNFYSQYKYIKPWLINKAPK--KSEYLQSEKDRSELNGIYECIL 166
Query: 222 CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMN 281
CACCS SCPSYWWN +KYLGPA+L+QAYRW+ DSRD T +RL+ L +++CHTIMN
Sbjct: 167 CACCSASCPSYWWNHDKYLGPAILLQAYRWLADSRDTNTKERLSLLSGKSKLFKCHTIMN 226
Query: 282 CTRTCPKGLNPGRAIAEIK 300
C+RTCPK LNPG+AIA IK
Sbjct: 227 CSRTCPKSLNPGKAIASIK 245
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 5/92 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDAL+KIK+E D +L FRRSCREGICGSC+MNI G N+LAC+ I + + IYPLP
Sbjct: 53 MILDALLKIKDEQDSSLAFRRSCREGICGSCSMNINGTNSLACLKPIKTDTTIITIYPLP 112
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKI 92
HMY++KDLVPD++NFY+QYK I+ PW I
Sbjct: 113 HMYIIKDLVPDLSNFYSQYKYIK-----PWLI 139
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 29/30 (96%)
Query: 332 YPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
YPLPHMY++KDLVPD++NFY+QYK I+PWL
Sbjct: 109 YPLPHMYIIKDLVPDLSNFYSQYKYIKPWL 138
>gi|114328741|ref|YP_745898.1| succinate dehydrogenase iron-sulfur subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114316915|gb|ABI62975.1| succinate dehydrogenase iron-sulfur protein [Granulibacter
bethesdensis CGDNIH1]
Length = 256
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 138/239 (57%), Gaps = 58/239 (24%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN----------- 150
R+F+ A A+ + K F IYRWNPD + P + Y++DL+
Sbjct: 16 RTFKAPAGAT---------RVKEFKIYRWNPDDGN-NPVVDTYEIDLDQCGPMVLDALIK 65
Query: 151 -------------------------KIDANDKVS------------KIYPLPHMYVVKDL 173
ID + ++ + PLPHM VV+DL
Sbjct: 66 IKNEVDTTLAFRRSCREGICGSCAMNIDGGNTLACLKPIEDVKGACNVNPLPHMAVVRDL 125
Query: 174 VPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
+PD+ YAQ +SI+PWL+ D +A+ QS ++R +LDG++ECILC CC+TSCPSYW
Sbjct: 126 IPDLTQAYAQLRSIEPWLKSDTPPPPDAERRQSREERAELDGMWECILCFCCTTSCPSYW 185
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNP 292
WNG++YLGPA L+ AYRWI DSRDE T +RL+ L+DPF +YRCHTIMNC +TCPKGLNP
Sbjct: 186 WNGDRYLGPATLLAAYRWIADSRDEATGERLDALEDPFKLYRCHTIMNCAQTCPKGLNP 244
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D TL FRRSCREGICGSCAMNI G NTLAC+ I+ + PLP
Sbjct: 58 MVLDALIKIKNEVDTTLAFRRSCREGICGSCAMNIDGGNTLACLKPIEDVKGACNVNPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VV+DL+PD+ YAQ +SI+ PW
Sbjct: 118 HMAVVRDLIPDLTQAYAQLRSIE-----PW 142
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 313 GLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G A L I+ + PLPHM VV+DL+PD+ YAQ +SI+PWL
Sbjct: 95 GNTLACLKPIEDVKGACNVNPLPHMAVVRDLIPDLTQAYAQLRSIEPWL 143
>gi|358334836|dbj|GAA53262.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein
[Clonorchis sinensis]
Length = 446
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 110/125 (88%), Gaps = 3/125 (2%)
Query: 167 MYVVKDLVPDMNNFYAQYKSIQPWLQR---DKENIGNAQYLQSLDDRKKLDGLYECILCA 223
M+V+KDLVPDMNNFYAQY+ I+P+L++ +E+IG A Y QS++DR KLDGLYECILCA
Sbjct: 1 MFVIKDLVPDMNNFYAQYRWIEPYLKKKGVSEEDIGKATYYQSVEDRAKLDGLYECILCA 60
Query: 224 CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCT 283
CC+TSCPSYWWNG+KYLGPAVL+QAYRW+IDSRD+ T +RL Q ++ +S+YRCHTIMNCT
Sbjct: 61 CCATSCPSYWWNGDKYLGPAVLLQAYRWLIDSRDDYTYERLTQFQNKWSLYRCHTIMNCT 120
Query: 284 RTCPK 288
TCPK
Sbjct: 121 ETCPK 125
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 337 MYVVKDLVPDMNNFYAQYKSIQPWLPR 363
M+V+KDLVPDMNNFYAQY+ I+P+L +
Sbjct: 1 MFVIKDLVPDMNNFYAQYRWIEPYLKK 27
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 23/25 (92%)
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHL 86
M+V+KDLVPDMNNFYAQY+ I+ +L
Sbjct: 1 MFVIKDLVPDMNNFYAQYRWIEPYL 25
>gi|402697745|gb|AFQ91060.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Chrysemys picta]
gi|402697753|gb|AFQ91064.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Deirochelys reticularia]
Length = 128
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/125 (77%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYL 47
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYLKK 49
>gi|385153526|ref|YP_006234130.1| succinate:cytochrome c oxidoreductase subunit 2 (mitochondrion)
[Pyropia haitanensis]
gi|384034929|gb|AFH57641.1| succinate:cytochrome c oxidoreductase subunit 2 (mitochondrion)
[Pyropia haitanensis]
Length = 248
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 118/149 (79%), Gaps = 2/149 (1%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
I N + IYPLPHMY++KDL+PD++NFYAQYK I+PWL ++ +YLQS DR
Sbjct: 96 IKTNTDIITIYPLPHMYIIKDLIPDLSNFYAQYKYIKPWLI--NKSFSQVEYLQSEKDRS 153
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+L+G+YECILCACCS SCPSYWWN +KYLGPA+L+QAYRW++DSRD T +RL LK
Sbjct: 154 ELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYRWLLDSRDTNTKNRLKLLKGKS 213
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
+++CHTIMNC+RTCPK LNPG+AIA IK
Sbjct: 214 KLFKCHTIMNCSRTCPKSLNPGKAIASIK 242
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 88/147 (59%), Gaps = 29/147 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIK+E D +L FRRSCREGICGSC+MNI GVNTLAC+ I N + IYPLP
Sbjct: 50 MILDALIKIKDEQDSSLAFRRSCREGICGSCSMNINGVNTLACLQPIKTNTDIITIYPLP 109
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTA-------------KNIRSFQLS 107
HMY++KDL+PD++NFYAQYK I+ PW I + + I L
Sbjct: 110 HMYIIKDLIPDLSNFYAQYKYIK-----PWLINKSFSQVEYLQSEKDRSELNGIYECILC 164
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P+ Y WN DK
Sbjct: 165 ACCSASCPS-----------YWWNHDK 180
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 303 LSGLVKKDKPGLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ G + G++T A L I N + IYPLPHMY++KDL+PD++NFYAQYK I+PWL
Sbjct: 76 ICGSCSMNINGVNTLACLQPIKTNTDIITIYPLPHMYIIKDLIPDLSNFYAQYKYIKPWL 135
>gi|402697771|gb|AFQ91073.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Sternotherus carinatus]
Length = 128
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 112/125 (89%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYL 47
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYLKK 49
>gi|402697743|gb|AFQ91059.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Chelydra serpentina]
Length = 128
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 112/125 (89%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYL 47
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYLKK 49
>gi|254292681|ref|YP_003058704.1| succinate dehydrogenase iron-sulfur subunit [Hirschia baltica ATCC
49814]
gi|254041212|gb|ACT58007.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Hirschia baltica ATCC 49814]
Length = 261
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 140/240 (58%), Gaps = 50/240 (20%)
Query: 112 SAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKID---- 153
S +E + KTF IYR++PD E P Y+VD + N++D
Sbjct: 19 SGPKSEGASSLKTFRIYRFDPDT-GENPRWDTYEVDTKLFGPMVLDALIYIKNEVDPTLA 77
Query: 154 ---------------------------ANDKVS---KIYPLPHMYVVKDLVPDMNNFYAQ 183
+D+ I PLPH V+KDLVPD++ FYAQ
Sbjct: 78 FRRSCREGVCGSCAMNIGGRNTIACTKGHDEFKGKITISPLPHQPVIKDLVPDLSQFYAQ 137
Query: 184 YKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPA 243
+ + P+LQ ++ Q+ +R+KLDGLYECI+CA CSTSCPSYWWNG+KYLGPA
Sbjct: 138 HAYVAPYLQTTTPE-PQREWKQTPQEREKLDGLYECIMCASCSTSCPSYWWNGDKYLGPA 196
Query: 244 VLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L+QAYRW+IDSRDE+T RL+ L+DPF +YRCHTIMNC + CPKGLNP AIA IK ++
Sbjct: 197 ALLQAYRWLIDSRDEETGSRLDDLEDPFKLYRCHTIMNCAQVCPKGLNPAEAIASIKTMM 256
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKNE+DPTL FRRSCREG+CGSCAMNIGG NT+AC D I PLP
Sbjct: 60 MVLDALIYIKNEVDPTLAFRRSCREGVCGSCAMNIGGRNTIACTKGHDEFKGKITISPLP 119
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H V+KDLVPD++ FYAQ+ + +L
Sbjct: 120 HQPVIKDLVPDLSQFYAQHAYVAPYL 145
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPH V+KDLVPD++ FYAQ+ + P+L
Sbjct: 115 ISPLPHQPVIKDLVPDLSQFYAQHAYVAPYL 145
>gi|402697773|gb|AFQ91074.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Sternotherus minor]
Length = 128
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 112/125 (89%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID + KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTSLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID + KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+ +L
Sbjct: 1 LACTKRIDTSLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYL 47
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID + KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L +
Sbjct: 2 ACTKRIDTSLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYLKK 49
>gi|389809773|ref|ZP_10205470.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
thiooxydans LCS2]
gi|388441488|gb|EIL97757.1| succinate dehydrogenase iron-sulfur subunit [Rhodanobacter
thiooxydans LCS2]
Length = 281
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 122/152 (80%), Gaps = 1/152 (0%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D ++ + +YPL +M VVKDLV D + AQY SI+PWL R K + LQS ++RK
Sbjct: 126 LDEINEPATVYPLNNMDVVKDLVGDQTHALAQYTSIKPWL-RSKTPAPTRERLQSPEERK 184
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
+LDG YECILC CC++ CPS+WWNG+++LGPAVL+QA+RW++DSRDE T +RL++L+DPF
Sbjct: 185 RLDGDYECILCFCCTSGCPSHWWNGDRFLGPAVLLQAHRWLVDSRDEATGERLDELEDPF 244
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+YRCHTI+NCTRTCPKGLNPG+ IAE+K ++
Sbjct: 245 KLYRCHTILNCTRTCPKGLNPGKKIAEVKLMI 276
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIKIKNE+DPTLTFRRSCREG+CGSCAMNI G N LACI +D ++ + +YPL
Sbjct: 80 MLLDALIKIKNEIDPTLTFRRSCREGVCGSCAMNIDGSNWLACIRSLDEINEPATVYPLN 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
+M VVKDLV D + AQY SI+ PW
Sbjct: 140 NMDVVKDLVGDQTHALAQYTSIK-----PW 164
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A + +D ++ + +YPL +M VVKDLV D + AQY SI+PWL
Sbjct: 121 ACIRSLDEINEPATVYPLNNMDVVKDLVGDQTHALAQYTSIKPWL 165
>gi|255587559|ref|XP_002534311.1| succinate dehydrogenase, putative [Ricinus communis]
gi|223525519|gb|EEF28073.1| succinate dehydrogenase, putative [Ricinus communis]
Length = 313
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 139/239 (58%), Gaps = 52/239 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN----------KIDANDKVSKIY---------- 162
K F +YRW+PD P+ KP +Q Y +DL++ KI A D S Y
Sbjct: 65 KEFRVYRWSPDNPNNKPFLQSYFIDLSSCGPMVLDALQKIKAEDDSSLSYRRSCREGICG 124
Query: 163 -----------------------------PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
PLPHMYV+KDLV D+ NFY QY+SI+PWL+
Sbjct: 125 SCSMNIDGTNTVACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWLKT 184
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
K+ +Y QS DRKKLDGLYECILCACCS SCPSYWWN E++LGPA L+ AYRWI
Sbjct: 185 RKKPEDGREYRQSPADRKKLDGLYECILCACCSASCPSYWWNPEEFLGPAPLIHAYRWIS 244
Query: 254 DSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI--KKLLSGLVKK 309
DSRD+ T +RL L +D +YRC TI NCT TCPK LNP AI ++ K LLS V++
Sbjct: 245 DSRDDFTDERLQALTEDQKRLYRCRTIKNCTATCPKSLNPADAIHKMKTKHLLSQPVEE 303
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL KIK E D +L++RRSCREGICGSC+MNI G NT+AC+ IDA+ + + I PL
Sbjct: 96 MVLDALQKIKAEDDSSLSYRRSCREGICGSCSMNIDGTNTVACLKPIDADTSRPTIITPL 155
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYV+KDLV D+ NFY QY+SI+ PW
Sbjct: 156 PHMYVIKDLVVDLTNFYNQYRSIE-----PW 181
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 316 TAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L IDA+ + + I PLPHMYV+KDLV D+ NFY QY+SI+PWL
Sbjct: 136 VACLKPIDADTSRPTIITPLPHMYVIKDLVVDLTNFYNQYRSIEPWL 182
>gi|374577030|ref|ZP_09650126.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. WSM471]
gi|374425351|gb|EHR04884.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Bradyrhizobium sp. WSM471]
Length = 261
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 111/141 (78%), Gaps = 1/141 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
++ PLPH VVKDLVPD+ NFYAQ I+PWLQ ++ QS +DR KLDGLYEC
Sbjct: 114 RVLPLPHQPVVKDLVPDLTNFYAQLALIEPWLQ-TVSPTPQKEWRQSHEDRAKLDGLYEC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN E++LGPA L+QA RW+ DSRDE T +RL++L+DPF +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNSERFLGPAALIQAARWVNDSRDEATGERLDKLEDPFRIYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIK 300
+NC + CPKGLNPG AI+ ++
Sbjct: 233 LNCAKACPKGLNPGEAISGLR 253
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 8/93 (8%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN---DKVSKIY 57
MVLD LI IKN +D TLTFRRSCREG+CGSC+MNI G N LAC + + + ++
Sbjct: 57 MVLDGLIWIKNNIDSTLTFRRSCREGVCGSCSMNIAGQNALACTKSMSEDVPQGEPLRVL 116
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPH VVKDLVPD+ NFYAQ I+ PW
Sbjct: 117 PLPHQPVVKDLVPDLTNFYAQLALIE-----PW 144
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
++ PLPH VVKDLVPD+ NFYAQ I+PWL
Sbjct: 114 RVLPLPHQPVVKDLVPDLTNFYAQLALIEPWL 145
>gi|402697755|gb|AFQ91065.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Eretmochelys imbricata]
Length = 128
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKTIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
+DPF
Sbjct: 124 XEDPF 128
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKTIEPYL 47
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKTIEPYLKK 49
>gi|402697767|gb|AFQ91071.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Pseudemys concinna]
Length = 128
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 110/122 (90%), Gaps = 2/122 (1%)
Query: 152 IDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQSLDD 209
ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+P+L+ RD+ N G QYLQS++D
Sbjct: 7 IDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYLKKRDESNQGKEQYLQSIED 66
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+D
Sbjct: 67 REKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLED 126
Query: 270 PF 271
PF
Sbjct: 127 PF 128
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+ +L
Sbjct: 1 LACTKXIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYL 47
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+P+L +
Sbjct: 2 ACTKXIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYLKK 49
>gi|402697769|gb|AFQ91072.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Rhinoclemmys pulcherrima]
Length = 128
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
+DPF
Sbjct: 124 XEDPF 128
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYL 47
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYLKK 49
>gi|402697765|gb|AFQ91070.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Malayemys subtrijuga]
Length = 128
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ D N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRXDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC + D N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+ +L
Sbjct: 1 LACTKRXDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYL 47
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + D N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK+I+P+L +
Sbjct: 2 ACTKRXDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKAIEPYLKK 49
>gi|323138219|ref|ZP_08073291.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylocystis sp. ATCC 49242]
gi|322396471|gb|EFX99000.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylocystis sp. ATCC 49242]
Length = 259
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 133/234 (56%), Gaps = 51/234 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDAN------- 155
E + F IYR+NPD D P + Y VD + NKID
Sbjct: 22 EGATNVREFRIYRYNPDS-DANPRIDTYFVDTGDCGPMVLDAIIWIKNKIDPTLTFRRSC 80
Query: 156 ---------------------------DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
+ V K+YPLPHM VVKDLVPD+ FY Q+ +I+
Sbjct: 81 REGICGSCSMNIDGTNTLACTKGMDEIEGVIKLYPLPHMGVVKDLVPDLTIFYEQHAAIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWLQ + + LQ+ R KLDGLYECILCACCSTSCPSYWWN ++YLGPA L+QA
Sbjct: 141 PWLQAGPDP--EKERLQTPAQRAKLDGLYECILCACCSTSCPSYWWNSDRYLGPAALLQA 198
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+RWI DSRDE T +RL + D F +YRCHTIMNCT+ CPK L P +AIAE+K +
Sbjct: 199 HRWISDSRDEATDERLGYVDDAFRLYRCHTIMNCTKACPKHLEPAKAIAELKNM 252
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 71/94 (75%), Gaps = 5/94 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDA+I IKN++DPTLTFRRSCREGICGSC+MNI G NTLAC +D + V K+YPLP
Sbjct: 58 MVLDAIIWIKNKIDPTLTFRRSCREGICGSCSMNIDGTNTLACTKGMDEIEGVIKLYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILG 94
HM VVKDLVPD+ FY Q+ +I+ PW G
Sbjct: 118 HMGVVKDLVPDLTIFYEQHAAIE-----PWLQAG 146
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + G +T A K +D + V K+YPLPHM VVKDLVPD+ FY Q+ +I+
Sbjct: 81 REGICGSCSMNIDGTNTLACTKGMDEIEGVIKLYPLPHMGVVKDLVPDLTIFYEQHAAIE 140
Query: 359 PWL 361
PWL
Sbjct: 141 PWL 143
>gi|302813399|ref|XP_002988385.1| hypothetical protein SELMODRAFT_47515 [Selaginella moellendorffii]
gi|300143787|gb|EFJ10475.1| hypothetical protein SELMODRAFT_47515 [Selaginella moellendorffii]
Length = 234
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 132/234 (56%), Gaps = 50/234 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------------------- 150
K + K F+IYRWNPD P Q YK+DLN+
Sbjct: 1 KSSNIKEFSIYRWNPDG-SSNPQQQVYKIDLNDCGPMVLDALIKIKNEVDQGLTFRRSCR 59
Query: 151 ---------------------KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
KI+ + + + PLPHMYV+KDLV D+ NFY QYKS++P
Sbjct: 60 EGICGSCAMNINGKNALACLTKIEKDAAQTSVLPLPHMYVIKDLVVDLTNFYQQYKSVEP 119
Query: 190 WLQ-RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
WL+ + G ++LQS +R KLDG+YECILCACC++SCPSYWWN EK+LGPA L+ A
Sbjct: 120 WLKTKTMLEAGQKEHLQSKKERLKLDGMYECILCACCTSSCPSYWWNPEKFLGPAALLHA 179
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+RWI DSRDE T +RL + + V RCHTI NC CPKGL+P I +IK L
Sbjct: 180 HRWIADSRDEYTRERLEAIAGDYKVGRCHTIRNCENACPKGLSPANQIIKIKAL 233
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 88/150 (58%), Gaps = 32/150 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D LTFRRSCREGICGSCAMNI G N LAC++KI+ + + + PLP
Sbjct: 36 MVLDALIKIKNEVDQGLTFRRSCREGICGSCAMNINGKNALACLTKIEKDAAQTSVLPLP 95
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAKNIRSFQ-------------- 105
HMYV+KDLV D+ NFY QYKS++ PW K L A Q
Sbjct: 96 HMYVIKDLVVDLTNFYQQYKSVE-----PWLKTKTMLEAGQKEHLQSKKERLKLDGMYEC 150
Query: 106 -LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A +S+ P+ Y WNP+K
Sbjct: 151 ILCACCTSSCPS-----------YWWNPEK 169
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L KI+ + + + PLPHMYV+KDLV D+ NFY QYKS++PWL
Sbjct: 77 ACLTKIEKDAAQTSVLPLPHMYVIKDLVVDLTNFYQQYKSVEPWL 121
>gi|452823769|gb|EME30777.1| succinate dehydrogenase (ubiquinone) iron-sulfur protein [Galdieria
sulphuraria]
Length = 275
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
+YPLP+MYV+KDL+ D++NFYAQ+++++PWL R G + LQS + R KLDGLYECI
Sbjct: 113 VYPLPYMYVIKDLIVDLSNFYAQHRAVKPWLIRSTPP-GGKEGLQSKESRLKLDGLYECI 171
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCA CSTSCPSYWWN EKYLGPA L+QAYRWIIDSRDE T +RL L D + +YRCH+I
Sbjct: 172 LCASCSTSCPSYWWNPEKYLGPAALLQAYRWIIDSRDEGTMERLKFLDDDYKLYRCHSIG 231
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NCTRTCPK L+P AI++IK L+
Sbjct: 232 NCTRTCPKHLDPQAAISKIKALV 254
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 26/165 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL KIKNE+D T FRRSCREGICGSCAMNI G N LAC++ + + +YPLP
Sbjct: 58 MVLDALFKIKNEVDSTFVFRRSCREGICGSCAMNIDGKNRLACLTPLAGPKQTVTVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGT-------LTAKNIR-------SFQL 106
+MYV+KDL+ D++NFYAQ+++++ PW I T L +K R L
Sbjct: 118 YMYVIKDLIVDLSNFYAQHRAVK-----PWLIRSTPPGGKEGLQSKESRLKLDGLYECIL 172
Query: 107 SAAASSAVPAE--KPAKY----KTFAIYRWNPDKPDEKPTMQEYK 145
A+ S++ P+ P KY YRW D DE TM+ K
Sbjct: 173 CASCSTSCPSYWWNPEKYLGPAALLQAYRWIIDSRDEG-TMERLK 216
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L + + +YPLP+MYV+KDL+ D++NFYAQ+++++PWL RS
Sbjct: 99 ACLTPLAGPKQTVTVYPLPYMYVIKDLIVDLSNFYAQHRAVKPWLIRS 146
>gi|302795957|ref|XP_002979741.1| hypothetical protein SELMODRAFT_57580 [Selaginella moellendorffii]
gi|300152501|gb|EFJ19143.1| hypothetical protein SELMODRAFT_57580 [Selaginella moellendorffii]
Length = 234
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 131/234 (55%), Gaps = 50/234 (21%)
Query: 118 KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN---------------------------- 149
K + K F+IYRWNPD P Q YK+DLN
Sbjct: 1 KSSNIKEFSIYRWNPDG-SSNPQQQVYKIDLNECGPMVLDALIKIKNEVDQGLTFRRSCR 59
Query: 150 --------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQP 189
KI+ + + + PLPHMYV+KDLV D+ NFY QYKS++P
Sbjct: 60 EGICGSCAMNINGKNGLACLTKIEKDAAQTSVLPLPHMYVIKDLVVDLTNFYQQYKSVEP 119
Query: 190 WLQ-RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
WL+ + G ++LQS +R KLDG+YECILCACC++SCPSYWWN EK+LGPA L+ A
Sbjct: 120 WLKTKTMLEAGQKEHLQSKKERLKLDGMYECILCACCTSSCPSYWWNPEKFLGPAALLHA 179
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+RWI DSRDE T +RL + + V RCHTI NC CPKGL+P I +IK L
Sbjct: 180 HRWIADSRDEYTRERLEAIAGDYKVGRCHTIRNCENACPKGLSPANQIIKIKAL 233
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 88/150 (58%), Gaps = 32/150 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+D LTFRRSCREGICGSCAMNI G N LAC++KI+ + + + PLP
Sbjct: 36 MVLDALIKIKNEVDQGLTFRRSCREGICGSCAMNINGKNGLACLTKIEKDAAQTSVLPLP 95
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAKNIRSFQ-------------- 105
HMYV+KDLV D+ NFY QYKS++ PW K L A Q
Sbjct: 96 HMYVIKDLVVDLTNFYQQYKSVE-----PWLKTKTMLEAGQKEHLQSKKERLKLDGMYEC 150
Query: 106 -LSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A +S+ P+ Y WNP+K
Sbjct: 151 ILCACCTSSCPS-----------YWWNPEK 169
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L KI+ + + + PLPHMYV+KDLV D+ NFY QYKS++PWL
Sbjct: 77 ACLTKIEKDAAQTSVLPLPHMYVIKDLVVDLTNFYQQYKSVEPWL 121
>gi|402697761|gb|AFQ91068.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Geoemyda spengleri]
Length = 128
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPDM+N YAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNXYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPDM+N YAQYK+I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNXYAQYKAIEPYL 47
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPDM+N YAQYK+I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNXYAQYKAIEPYLKK 49
>gi|338741413|ref|YP_004678375.1| succinate dehydrogenase, iron-sulfur subunit [Hyphomicrobium sp.
MC1]
gi|337761976|emb|CCB67811.1| succinate dehydrogenase, iron-sulfur subunit [Hyphomicrobium sp.
MC1]
Length = 259
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 147/235 (62%), Gaps = 50/235 (21%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------LNNKIDANDKVS--- 159
++ +K F IYRWNPD + P + Y +D + N+ID
Sbjct: 22 DREGDWKEFRIYRWNPDD-ERNPRVDTYHIDQKQCGPMVLDALIKIKNEIDPTLTFRRSC 80
Query: 160 -------------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 188
K+YPLPHM VVKDLVPD+ NFYAQ++SI+
Sbjct: 81 REGICGSCAMNIDGTNTLACLKGIEDVKGPVKVYPLPHMEVVKDLVPDLTNFYAQHRSIE 140
Query: 189 PWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQA 248
PWL+ D ++ QS +DR+KLDGLYECILCACCS+SCPSYWWN ++YLGPA+L+QA
Sbjct: 141 PWLKTDTPT-PPKEWKQSREDREKLDGLYECILCACCSSSCPSYWWNSDRYLGPAILLQA 199
Query: 249 YRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
YRW+IDSRDE T +RL+ L+DPF +YRCHTIMNC + CPKGL+P +AIAE+KKL+
Sbjct: 200 YRWVIDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKGLSPAKAIAELKKLM 254
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC+ I+ K+YPLP
Sbjct: 58 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKGIEDVKGPVKVYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLVPD+ NFYAQ++SI+ PW
Sbjct: 118 HMEVVKDLVPDLTNFYAQHRSIE-----PW 142
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L I+ K+YPLPHM VVKDLVPD+ NFYAQ++SI+PWL
Sbjct: 99 ACLKGIEDVKGPVKVYPLPHMEVVKDLVPDLTNFYAQHRSIEPWL 143
>gi|402697739|gb|AFQ91057.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Anniella pulchra]
Length = 128
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/116 (80%), Positives = 108/116 (93%), Gaps = 1/116 (0%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDDRKKLDG 215
KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L++ D+ N G QYLQS++DR+KLDG
Sbjct: 13 KVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLRKKDESNQGKEQYLQSIEDREKLDG 72
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
LYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+DPF
Sbjct: 73 LYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPF 128
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC ++I+ + KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQ +L
Sbjct: 1 LACTTRINTDLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYL 47
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 327 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L
Sbjct: 13 KVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYL 47
>gi|402697759|gb|AFQ91067.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Geochelone sulcata]
Length = 128
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 112/125 (89%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID + KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTDLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW++DSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMVDSRDDFTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID + KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+ +L
Sbjct: 1 LACTKRIDTDLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYL 47
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID + KVSKIYPLPHMYVVKDLVPD++NFYAQYK+I+P+L +
Sbjct: 2 ACTKRIDTDLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIEPYLKK 49
>gi|304320534|ref|YP_003854177.1| Succinate dehydrogenase iron-sulfur protein [Parvularcula
bermudensis HTCC2503]
gi|303299436|gb|ADM09035.1| Succinate dehydrogenase iron-sulfur protein [Parvularcula
bermudensis HTCC2503]
Length = 265
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 140/241 (58%), Gaps = 56/241 (23%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVD--------------------------- 147
P+ A+ +T +YR++PDK DE P + Y +D
Sbjct: 23 PSGSDAQMRTVKVYRFDPDK-DENPRLDTYILDVAGISMVLDLLIKIKDQLDPTLSFRRS 81
Query: 148 ------------LNNK-----IDANDKVSK----IYPLPHMYVVKDLVPDMNNFYAQYKS 186
+N K I D++ I+PLPH VVKDLV D++ FY Q+
Sbjct: 82 CREGVCGSCAFNINGKNGLACITGLDELGSGDITIHPLPHQPVVKDLVTDLSKFYEQHAE 141
Query: 187 IQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK-----YLG 241
+QP+LQ + E ++LQS +DR++LDGLYECILCACCSTSCPSYWWNG K YLG
Sbjct: 142 VQPYLQSNNE--PEKEHLQSQEDREQLDGLYECILCACCSTSCPSYWWNGNKDGEHEYLG 199
Query: 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
PA L+QA+RWI DSRD+KTA+RL L D F +YRCHTIMNC CPK LNP AI EIK+
Sbjct: 200 PAALLQAHRWIKDSRDDKTAERLAALDDTFKLYRCHTIMNCVNVCPKNLNPAEAINEIKR 259
Query: 302 L 302
+
Sbjct: 260 M 260
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLD LIKIK+++DPTL+FRRSCREG+CGSCA NI G N LACI+ +D I+PL
Sbjct: 60 MVLDLLIKIKDQLDPTLSFRRSCREGVCGSCAFNINGKNGLACITGLDELGSGDITIHPL 119
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH VVKDLV D++ FY Q+ +Q +L
Sbjct: 120 PHQPVVKDLVTDLSKFYEQHAEVQPYL 146
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I+PLPH VVKDLV D++ FY Q+ +QP+L
Sbjct: 116 IHPLPHQPVVKDLVTDLSKFYEQHAEVQPYL 146
>gi|402697751|gb|AFQ91063.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Dibamus sp. JJF-2012]
Length = 128
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L++ D+ G QYLQS
Sbjct: 4 TKRIDTNLGKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKKKDESQQGKQQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LQDPF 128
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQ +L
Sbjct: 1 LACTKRIDTNLGKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYL 47
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L +
Sbjct: 2 ACTKRIDTNLGKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKK 49
>gi|402697741|gb|AFQ91058.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Apalone ferox]
Length = 128
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKRDELNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSR + T +RL Q
Sbjct: 64 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRXDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 24/130 (18%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKI 92
LAC +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+ +L G +
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKRDELNQGKEQY 60
Query: 93 LGTLTAKN----IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDK-PDEKPTMQEYKVD 147
L ++ + + L A S++ P+ Y WN DK MQ Y+
Sbjct: 61 LQSIEDREKLDGLYECILCACCSTSCPS-----------YWWNGDKYLGPAVLMQAYRWM 109
Query: 148 LNNKIDANDK 157
++++ D ++
Sbjct: 110 IDSRXDYTEE 119
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 49
>gi|308523785|gb|ADO33732.1| mitochondrial succinate dehydrogenase iron-sulfur subunit, partial
[Stagonosporopsis cucurbitacearum]
gi|308523787|gb|ADO33733.1| mitochondrial succinate dehydrogenase iron-sulfur subunit, partial
[Stagonosporopsis cucurbitacearum]
Length = 152
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 109/130 (83%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K S+IYPLPHMYVVKDLVPDM FY QY+S++P+LQR + +Y Q+ +DR+KLDGL
Sbjct: 23 KESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRTTPSPDGREYRQTKEDRRKLDGL 82
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN E+YLGPAVL+Q+YRWI DSRDEK A+R + L + S+YRC
Sbjct: 83 YECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRC 142
Query: 277 HTIMNCTRTC 286
HTI+NC+RTC
Sbjct: 143 HTILNCSRTC 152
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 31 CAMNIGGVNTLACISKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI----QRH 85
CAMNI GVNTLAC+ +I + K S+IYPLPHMYVVKDLVPDM FY QY+S+ QR
Sbjct: 1 CAMNIDGVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 60
Query: 86 LGGPWKILGTLTAKNIRSFQ------LSAAASSAVPA------EKPAKYKTFAIYRWNPD 133
P T ++ R L A S++ P+ E YRW D
Sbjct: 61 TPSPDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIAD 120
Query: 134 KPDEKPTMQEYKVDLNNKI 152
DEK E + LNN +
Sbjct: 121 SRDEKKA--ERQDALNNSM 137
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 7 GVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 60
>gi|402697763|gb|AFQ91069.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Malaclemys terrapin]
Length = 128
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 109/125 (87%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ-RDKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+P+L+ RD+ N G QYLQS
Sbjct: 4 TKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYLKKRDESNQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L PF
Sbjct: 124 LXXPF 128
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+ +L
Sbjct: 1 LACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYL 47
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPDM+NFYAQYK I+P+L +
Sbjct: 2 ACTKRIDTNLSKVSKIYPLPHMYVVKDLVPDMSNFYAQYKVIEPYLKK 49
>gi|402697735|gb|AFQ91055.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Aglaiocercus kingi]
Length = 128
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 112/123 (91%), Gaps = 2/123 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KID + +KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 6 KIDTDLNKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDESKQGKQQYLQSIE 65
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+
Sbjct: 66 DRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAQLQ 125
Query: 269 DPF 271
DPF
Sbjct: 126 DPF 128
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LACI KID + +KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 1 LACIKKIDTDLNKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL 47
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID + +KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 2 ACIKKIDTDLNKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 49
>gi|145486477|ref|XP_001429245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396336|emb|CAK61847.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 141/257 (54%), Gaps = 49/257 (19%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
T K I+ + E+ AK K F IYR++P ++ P Y VDL
Sbjct: 37 TVKGIQQINYVVEHDPKLTVEEKAKMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYL 96
Query: 150 -----------------------------------------NKIDAN-DKVSKIYPLPHM 167
+ ID + + + I PL HM
Sbjct: 97 DALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHM 156
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
+VVKDLV DM NFY QYK+I P+L+R GN +Y+QS++DRK LDGLYEC+LCACCST
Sbjct: 157 FVVKDLVVDMTNFYTQYKTIDPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCACCST 216
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWW+ ++YLGPAVLMQAYRWI+DSRDE T +RL +L + V C I C+ TCP
Sbjct: 217 SCPSYWWHPDRYLGPAVLMQAYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSFTCP 276
Query: 288 KGLNPGRAIAEIKKLLS 304
KGL+P R++ + KL+
Sbjct: 277 KGLDPQRSMNHLMKLIE 293
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M LDAL+ IK+ D +L+ RRSCREGICGSC+MN G++ LACI ID + + + I PL
Sbjct: 94 MYLDALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPL 153
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKNIRSFQ---LSAA 109
HM+VVKDLV DM NFY QYK+I +L G I K + L A
Sbjct: 154 GHMFVVKDLVVDMTNFYTQYKTIDPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCAC 213
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ P +Y A+ YRW D DE
Sbjct: 214 CSTSCPSYWWHPDRYLGPAVLMQAYRWIVDSRDE 247
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +H ID + + + I PL HM+VVKDLV DM NFY QYK+I P+L R
Sbjct: 135 ACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTIDPYLKR 182
>gi|145494101|ref|XP_001433045.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400161|emb|CAK65648.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 141/257 (54%), Gaps = 49/257 (19%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
T K I+ + E+ AK K F IYR++P ++ P Y VDL
Sbjct: 37 TVKGIQQINYVVEHDPKLTVEEKAKMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYL 96
Query: 150 -----------------------------------------NKIDAN-DKVSKIYPLPHM 167
+ ID + + + I PL HM
Sbjct: 97 DALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHM 156
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
+VVKDLV DM NFY QYK+I P+L+R GN +Y+QS++DRK LDGLYEC+LCACCST
Sbjct: 157 FVVKDLVVDMTNFYTQYKTIDPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCACCST 216
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWW+ ++YLGPAVLMQAYRWI+DSRDE T +RL +L + V C I C+ TCP
Sbjct: 217 SCPSYWWHPDRYLGPAVLMQAYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSFTCP 276
Query: 288 KGLNPGRAIAEIKKLLS 304
KGL+P R++ + KL+
Sbjct: 277 KGLDPQRSMNHLMKLIE 293
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M LDAL+ IK+ D +L+ RRSCREGICGSC+MN G++ LACI ID + + + I PL
Sbjct: 94 MYLDALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPL 153
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKNIRSFQ---LSAA 109
HM+VVKDLV DM NFY QYK+I +L G I K + L A
Sbjct: 154 GHMFVVKDLVVDMTNFYTQYKTIDPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCAC 213
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ P +Y A+ YRW D DE
Sbjct: 214 CSTSCPSYWWHPDRYLGPAVLMQAYRWIVDSRDE 247
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +H ID + + + I PL HM+VVKDLV DM NFY QYK+I P+L R
Sbjct: 135 ACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTIDPYLKR 182
>gi|330792768|ref|XP_003284459.1| succinate dehydrogenase [Dictyostelium purpureum]
gi|325085602|gb|EGC39006.1| succinate dehydrogenase [Dictyostelium purpureum]
Length = 283
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 146/258 (56%), Gaps = 61/258 (23%)
Query: 107 SAAASSAVP----AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------ 150
+ A + VP AEK + F IYR+N ++ KP +Q Y V+L
Sbjct: 25 TTEAKAEVPVVKAAEKKDHFVNFQIYRYN-EEVGAKPYVQTYNVNLKECGPMILDALLLI 83
Query: 151 ------------------------KIDANDKVS--------------KIYPLPHMYVVKD 172
ID ++ ++ K+YPLPHM+VV+D
Sbjct: 84 KNTQDPTLSFRRSCREGICGSCAMNIDGSNTLACIKKTTEAIRGNSIKVYPLPHMHVVRD 143
Query: 173 LVPDMNNFYAQYKSIQPWLQ--RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCP 230
L+PD+ +FY Q+KSI+PWL+ D + LQS ++R KLDGLYECILCACCSTSCP
Sbjct: 144 LIPDLTHFYEQHKSIKPWLEPAVDAPRYNGKELLQSKENRHKLDGLYECILCACCSTSCP 203
Query: 231 SYWWN---GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTC 286
SYWW+ YLGPAVL+QAYRWI DSRD T DRL + +D +Y+CHTIMNCTR C
Sbjct: 204 SYWWSEGGDGGYLGPAVLLQAYRWIADSRDSSTKDRLAIISEDNMKIYKCHTIMNCTRVC 263
Query: 287 PKGLNPGRAIAEIKKLLS 304
PK LNP AIA+IK LL+
Sbjct: 264 PKHLNPALAIAKIKSLLA 281
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 71/92 (77%), Gaps = 7/92 (7%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS--KIYP 58
M+LDAL+ IKN DPTL+FRRSCREGICGSCAMNI G NTLACI K + + K+YP
Sbjct: 75 MILDALLLIKNTQDPTLSFRRSCREGICGSCAMNIDGSNTLACIKKTTEAIRGNSIKVYP 134
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
LPHM+VV+DL+PD+ +FY Q+KSI+ PW
Sbjct: 135 LPHMHVVRDLIPDLTHFYEQHKSIK-----PW 161
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 32/36 (88%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRSI 365
K+YPLPHM+VV+DL+PD+ +FY Q+KSI+PWL ++
Sbjct: 131 KVYPLPHMHVVRDLIPDLTHFYEQHKSIKPWLEPAV 166
>gi|66826409|ref|XP_646559.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
gi|74858368|sp|Q55CC2.1|DHSB_DICDI RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial; AltName: Full=Iron-sulfur
subunit of complex II; Short=Ip; Flags: Precursor
gi|60474473|gb|EAL72410.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
Length = 287
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 142/245 (57%), Gaps = 57/245 (23%)
Query: 116 AEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL--------------------------- 148
AEK + F +YR+N ++ KP +Q Y ++L
Sbjct: 42 AEKKDHFVNFQVYRYN-EETTAKPYIQTYNINLKDCGPMVLDALLLIKNNIDPTLSFRRS 100
Query: 149 ---------------NNKIDANDKVS--------KIYPLPHMYVVKDLVPDMNNFYAQYK 185
+N + K++ K+YPLPHM+VV+DL+PD+++FY Q+K
Sbjct: 101 CREGICGSCAMNLNGSNTLACTKKITDCLSGDTVKVYPLPHMHVVRDLIPDLSHFYTQHK 160
Query: 186 SIQPWLQ--RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN---GEKYL 240
SI+PWL+ D + LQS ++R KLDGLYECILCACCSTSCPSYWW+ YL
Sbjct: 161 SIKPWLEPAVDVPRYNGKEILQSKENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYL 220
Query: 241 GPAVLMQAYRWIIDSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI 299
GPAVL+QAYRWI DSRD DRL L +D VY+CHTIMNCT CPKGLNPG++IA I
Sbjct: 221 GPAVLLQAYRWIADSRDSIQKDRLAILSEDQMKVYKCHTIMNCTAVCPKGLNPGKSIANI 280
Query: 300 KKLLS 304
K LL+
Sbjct: 281 KYLLA 285
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 9/93 (9%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID---ANDKVSKIY 57
MVLDAL+ IKN +DPTL+FRRSCREGICGSCAMN+ G NTLAC KI + D V K+Y
Sbjct: 79 MVLDALLLIKNNIDPTLSFRRSCREGICGSCAMNLNGSNTLACTKKITDCLSGDTV-KVY 137
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPHM+VV+DL+PD+++FY Q+KSI+ PW
Sbjct: 138 PLPHMHVVRDLIPDLSHFYTQHKSIK-----PW 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 33/36 (91%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRSI 365
K+YPLPHM+VV+DL+PD+++FY Q+KSI+PWL ++
Sbjct: 135 KVYPLPHMHVVRDLIPDLSHFYTQHKSIKPWLEPAV 170
>gi|340777815|ref|ZP_08697758.1| succinate dehydrogenase iron-sulfur subunit [Acetobacter aceti NBRC
14818]
Length = 260
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 131/228 (57%), Gaps = 49/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLN--------------NKIDANDKVSK-------- 160
+TF IYRW PD P M Y++D++ N +D +
Sbjct: 28 RTFKIYRWTPDD-GSNPVMDTYEIDIDAIGPMVLDALIHIKNDVDPTLTFRRSCREGICG 86
Query: 161 --------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
I PLPHM +VKDLV +++ YAQ +SI PW++ D
Sbjct: 87 SCAMNIDGENTLACLKPIRDMQGDIIINPLPHMPIVKDLVSNLDGAYAQLRSIDPWMKAD 146
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ + LQS ++R KLDG++ECILC CC+TSCPSYWWNG++YLGPA L+ AYRWI D
Sbjct: 147 SAPPPDGERLQSPEERAKLDGMWECILCFCCTTSCPSYWWNGDRYLGPATLLAAYRWIAD 206
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
SRDE DRL+ L+D F +Y C TIMNCT+TCPKGLNP +AI IK+L
Sbjct: 207 SRDEHQGDRLDSLEDTFKLYACRTIMNCTQTCPKGLNPAKAIGRIKEL 254
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++DPTLTFRRSCREGICGSCAMNI G NTLAC+ I I PLP
Sbjct: 58 MVLDALIHIKNDVDPTLTFRRSCREGICGSCAMNIDGENTLACLKPIRDMQGDIIINPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM +VKDLV +++ YAQ +SI PW
Sbjct: 118 HMPIVKDLVSNLDGAYAQLRSID-----PW 142
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLPHM +VKDLV +++ YAQ +SI PW+
Sbjct: 113 INPLPHMPIVKDLVSNLDGAYAQLRSIDPWM 143
>gi|402697749|gb|AFQ91062.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Dendropicos gabonensis]
Length = 128
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 111/123 (90%), Gaps = 2/123 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KID + KV+KIYPLPHMYVVKDLVPD+NNFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 6 KIDPDLSKVTKIYPLPHMYVVKDLVPDLNNFYAQYKSIEPYLKKKDESKEGKQQYLQSIE 65
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+
Sbjct: 66 DRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQ 125
Query: 269 DPF 271
DPF
Sbjct: 126 DPF 128
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LACI KID + KV+KIYPLPHMYVVKDLVPD+NNFYAQYKSI+ +L
Sbjct: 1 LACIKKIDPDLSKVTKIYPLPHMYVVKDLVPDLNNFYAQYKSIEPYL 47
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID + KV+KIYPLPHMYVVKDLVPD+NNFYAQYKSI+P+L +
Sbjct: 2 ACIKKIDPDLSKVTKIYPLPHMYVVKDLVPDLNNFYAQYKSIEPYLKK 49
>gi|402773785|ref|YP_006593322.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylocystis sp. SC2]
gi|401775805|emb|CCJ08671.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Methylocystis sp. SC2]
Length = 262
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 115/151 (76%), Gaps = 2/151 (1%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRK 211
+D D KIYPLPHM VVKDLVPD+ FY QY +IQPWL+ + QS ++R
Sbjct: 104 MDDIDGPIKIYPLPHMAVVKDLVPDLTIFYEQYAAIQPWLRAGPAP--EKERRQSPEERA 161
Query: 212 KLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF 271
KLDGLYECILCACCST+CPSYWWN +++LGPA L+QA+RW+ DSRDE T DR++ + D F
Sbjct: 162 KLDGLYECILCACCSTACPSYWWNADRFLGPAALLQAFRWVQDSRDEATRDRVSYVDDVF 221
Query: 272 SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
+YRCHTIMNCT+ CPK L+P +AIAE+K +
Sbjct: 222 RLYRCHTIMNCTQVCPKCLSPAKAIAELKNM 252
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 84/147 (57%), Gaps = 29/147 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN +DPTL FRRSCREGICGSC+MNIGG+NTLAC +D D KIYPLP
Sbjct: 58 MVLDALIWIKNRIDPTLAFRRSCREGICGSCSMNIGGLNTLACTKGMDDIDGPIKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQ-------------LS 107
HM VVKDLVPD+ FY QY +IQ PW G K R L
Sbjct: 118 HMAVVKDLVPDLTIFYEQYAAIQ-----PWLRAGPAPEKERRQSPEERAKLDGLYECILC 172
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S+A P+ Y WN D+
Sbjct: 173 ACCSTACPS-----------YWWNADR 188
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 300 KKLLSGLVKKDKPGLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
++ + G + GL+T A K +D D KIYPLPHM VVKDLVPD+ FY QY +IQ
Sbjct: 81 REGICGSCSMNIGGLNTLACTKGMDDIDGPIKIYPLPHMAVVKDLVPDLTIFYEQYAAIQ 140
Query: 359 PWL 361
PWL
Sbjct: 141 PWL 143
>gi|157369509|ref|YP_001477498.1| succinate dehydrogenase iron-sulfur subunit [Serratia
proteamaculans 568]
gi|157321273|gb|ABV40370.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia proteamaculans 568]
Length = 238
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYK--------------------------------------- 145
F+IYR+NPD D+ P MQ+Y
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYSLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 146 -VDLNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+++N K + +K I PLP + VV+DLV DM FY QY+ I+P+LQ
Sbjct: 64 GINMNGKNGLACITPVSSLTKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPFLQN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS ++R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETEERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 31/150 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ + + K +K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGINMNGKNGLACITPVSSLTKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSI-------------QRHLGGPWKILGTLTAKNIRSF 104
PLP + VV+DLV DM FY QY+ I + HL P + +
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPFLQNDGKNPPAREHLQSPEE---RAKLDGLYEC 149
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ + WNPDK
Sbjct: 150 ILCACCSTSCPS-----------FWWNPDK 168
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGINMNGK 70
Query: 312 PGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL + + +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPVSSLTKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPFL 121
>gi|145531499|ref|XP_001451516.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419171|emb|CAK84119.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 141/257 (54%), Gaps = 49/257 (19%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN------- 149
T K I+ + E+ +K K F IYR++P ++ P Y VDL
Sbjct: 37 TVKGIQQINYVVEHDPKLTTEEKSKMKQFLIYRYDPADENDFPKYVSYYVDLKKIPPMYL 96
Query: 150 -----------------------------------------NKIDAN-DKVSKIYPLPHM 167
+ ID + + + I PL HM
Sbjct: 97 DALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPLGHM 156
Query: 168 YVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCST 227
+VVKDLV DM NFY QYK+I P+L+R GN +Y+QS++DRK LDGLYEC+LCACCST
Sbjct: 157 FVVKDLVVDMTNFYTQYKTIDPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCACCST 216
Query: 228 SCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287
SCPSYWW+ ++YLGPAVLMQAYRWI+DSRDE T +RL +L + V C I C+ TCP
Sbjct: 217 SCPSYWWHPDRYLGPAVLMQAYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIGMCSFTCP 276
Query: 288 KGLNPGRAIAEIKKLLS 304
KGL+P R++ + KL+
Sbjct: 277 KGLDPQRSMNHLMKLIE 293
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M LDAL+ IK+ D +L+ RRSCREGICGSC+MN G++ LACI ID + + + I PL
Sbjct: 94 MYLDALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPL 153
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAKNIRSFQ---LSAA 109
HM+VVKDLV DM NFY QYK+I +L G I K + L A
Sbjct: 154 GHMFVVKDLVVDMTNFYTQYKTIDPYLKRKTPKEGNKEYIQSVEDRKLLDGLYECVLCAC 213
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ P +Y A+ YRW D DE
Sbjct: 214 CSTSCPSYWWHPDRYLGPAVLMQAYRWIVDSRDE 247
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +H ID + + + I PL HM+VVKDLV DM NFY QYK+I P+L R
Sbjct: 135 ACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTIDPYLKR 182
>gi|304395706|ref|ZP_07377589.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. aB]
gi|440759863|ref|ZP_20938987.1| Succinate dehydrogenase iron-sulfur protein [Pantoea agglomerans
299R]
gi|304357000|gb|EFM21364.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. aB]
gi|436426402|gb|ELP24115.1| Succinate dehydrogenase iron-sulfur protein [Pantoea agglomerans
299R]
Length = 238
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM+ FYAQY+ I+P+L D EN ++LQS D+R+ LDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMSQFYAQYEKIKPFLLNDGENPPAREHLQSPDEREHLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN EK++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPEKFIGPAGLLAAYRFLIDSRDTETEARLDNLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A + I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM+ FYAQY+ I+ L
Sbjct: 93 PLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM+ FYAQY+ I+P+L
Sbjct: 71 NGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
>gi|153878087|ref|ZP_02004479.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Beggiatoa sp. PS]
gi|152065449|gb|EDN65521.1| Succinate dehydrogenase/fumarate reductase iron-sulfur protein
[Beggiatoa sp. PS]
Length = 134
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 107/130 (82%)
Query: 174 VPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYW 233
+PD+ FYAQY SI+PWL+ + + + LQS +DR LDGLYECILCACCSTSCPSYW
Sbjct: 1 MPDLTYFYAQYASIKPWLETQTQPPPDREILQSKEDRALLDGLYECILCACCSTSCPSYW 60
Query: 234 WNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPG 293
WNG++YLGPA+L+QAYRWI DSRDE T +RL+ L+DPF +YRCHTIMNCT TCPK LNP
Sbjct: 61 WNGDRYLGPAILLQAYRWIADSRDEMTGERLDNLEDPFRLYRCHTIMNCTNTCPKSLNPA 120
Query: 294 RAIAEIKKLL 303
+AI EIKK+L
Sbjct: 121 KAIIEIKKML 130
>gi|424864063|ref|ZP_18287970.1| succinate dehydrogenase iron-sulfur subunit [SAR86 cluster
bacterium SAR86B]
gi|400759923|gb|EJP74101.1| succinate dehydrogenase iron-sulfur subunit [SAR86 cluster
bacterium SAR86B]
Length = 243
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 112/144 (77%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
++ PLP + V++DLV DM FYAQY+ I+P+LQ D E + LQS +DR KLDG YEC
Sbjct: 89 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFLQNDTE-APLQERLQSPEDRDKLDGFYEC 147
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWN +K++GPA L+QAYR++ DSRD KTA+RL+ L DPFSVYRCH I
Sbjct: 148 ILCACCSTSCPSFWWNPDKFVGPAALLQAYRFLADSRDLKTAERLDDLSDPFSVYRCHGI 207
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC CPKGLNP AI EIK +L
Sbjct: 208 MNCVSVCPKGLNPNEAIGEIKDML 231
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKI--YP 58
MVLD L +K E D ++++RRSCREG+CGS MNI G N LACI+ + + K +KI P
Sbjct: 34 MVLDLLNMLKEE-DESISYRRSCREGVCGSDGMNINGKNGLACITPLSSVIKKNKIELRP 92
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LP + V++DLV DM FYAQY+ I+ L
Sbjct: 93 LPGLPVIRDLVVDMTEFYAQYEKIKPFL 120
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 38/140 (27%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKG 289
Y +N EK P M +Y +D D LN LK D YR R+C +G
Sbjct: 9 YRYNPEKDRFP--YMMSYSLDKPKKDIMVLDLLNMLKEEDESISYR--------RSCREG 58
Query: 290 --------LNPGRAIAEIKKLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVK 341
+N +A I L S ++KK+K ++ PLP + V++
Sbjct: 59 VCGSDGMNINGKNGLACITPL-SSVIKKNK-----------------IELRPLPGLPVIR 100
Query: 342 DLVPDMNNFYAQYKSIQPWL 361
DLV DM FYAQY+ I+P+L
Sbjct: 101 DLVVDMTEFYAQYEKIKPFL 120
>gi|402697747|gb|AFQ91061.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Cyrtodactylus sp. JJF-2012]
Length = 128
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 111/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L++ D+ G QYLQS
Sbjct: 4 TRRIDPNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKKKDESKQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
+++R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQ +L
Sbjct: 1 LACTRRIDPNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYL 47
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L +
Sbjct: 2 ACTRRIDPNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKK 49
>gi|440229899|ref|YP_007343692.1| succinate dehydrogenase subunit B [Serratia marcescens FGI94]
gi|440051604|gb|AGB81507.1| succinate dehydrogenase subunit B [Serratia marcescens FGI94]
Length = 238
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 134/231 (58%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID------------------------------- 153
F+IYR+NPD D+ P MQ+Y ++ D
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 154 ---------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISSLRKGNGKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIRPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D +N ++LQS D+R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NDGKNPPAREHLQSPDERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +TA+RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETAERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKI 56
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I + N K+ I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISSLRKGNGKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYTQYEKIRPYL 121
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 27/114 (23%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLD----TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL ++L K N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPISSLRK--GNGKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIRPYL 121
>gi|406707294|ref|YP_006757646.1| succinate dehydrogenase subunit B [alpha proteobacterium HIMB59]
gi|406653070|gb|AFS48469.1| succinate dehydrogenase subunit B [alpha proteobacterium HIMB59]
Length = 265
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPHM VVKDLV D+ + Q+KSI+PWL ++ E+ + +QS++DR KLDG +ECI
Sbjct: 120 IYPLPHMRVVKDLVVDLKKAFEQFKSIKPWLMKNSEH-NERENIQSVEDRDKLDGKWECI 178
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+C CSTSCPSYWWN +KYLGPA L+QA RWI DSRDE+ +RL +L D F +YRCH+IM
Sbjct: 179 MCFSCSTSCPSYWWNEDKYLGPAALLQANRWIQDSRDEEKKERLKELDDNFKLYRCHSIM 238
Query: 281 NCTRTCPKGLNPGRAIAEIK 300
NCTR+CPKGLNP +AI+EIK
Sbjct: 239 NCTRSCPKGLNPAKAISEIK 258
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L KIK+E+D +LT+R+SCREG+CGSCAMNI GVNTLAC I+ K IYPLP
Sbjct: 65 MVLDILNKIKSEVDTSLTYRKSCREGVCGSCAMNIDGVNTLACQKHIEDCSKEITIYPLP 124
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM VVKDLV D+ + Q+KSI+ PW
Sbjct: 125 HMRVVKDLVVDLKKAFEQFKSIK-----PW 149
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A K I+ K IYPLPHM VVKDLV D+ + Q+KSI+PWL
Sbjct: 101 GVNTLACQKHIEDCSKEITIYPLPHMRVVKDLVVDLKKAFEQFKSIKPWL 150
>gi|324526075|gb|ADY48628.1| Succinate dehydrogenase ubiquinone iron-sulfur subunit [Ascaris
suum]
Length = 144
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 111/137 (81%), Gaps = 1/137 (0%)
Query: 177 MNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWN 235
MN FYAQY IQPWLQ+ K ++G Q QS+ +++K+DGLYECILCACCSTSCPSYWWN
Sbjct: 1 MNLFYAQYAYIQPWLQKKPKLDVGKKQQYQSMKEQEKIDGLYECILCACCSTSCPSYWWN 60
Query: 236 GEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRA 295
+KYLGPAVLMQAYRWIIDSRD+ +RL++++D FS ++CHTIMNCT+TCPK LNP +A
Sbjct: 61 ADKYLGPAVLMQAYRWIIDSRDDMAVERLSRIQDSFSAFKCHTIMNCTKTCPKHLNPAKA 120
Query: 296 IAEIKKLLSGLVKKDKP 312
I EIK LL+ + K P
Sbjct: 121 IGEIKMLLTKIKTKPAP 137
>gi|340546097|gb|AEK51847.1| succinate dehydrogenase complex iron sulfur subunit B [Ichthyophis
bannanicus]
Length = 128
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 110/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
KID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QY QS
Sbjct: 4 TTKIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESEQGKEQYRQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +
Sbjct: 64 IEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAK 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LQDPF 128
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC +KID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 1 LACTTKIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 47
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A KID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 2 ACTTKIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 49
>gi|402697737|gb|AFQ91056.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Alethe castanea]
Length = 128
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 112/123 (91%), Gaps = 2/123 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KID + +KV+KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 6 KIDXDLNKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKEGKQQYLQSIE 65
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ TA+R QL+
Sbjct: 66 DRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTAERXAQLQ 125
Query: 269 DPF 271
DPF
Sbjct: 126 DPF 128
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LACI KID + +KV+KIYPLPHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 1 LACIKKIDXDLNKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 47
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KID + +KV+KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 2 ACIKKIDXDLNKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 49
>gi|308523789|gb|ADO33734.1| mitochondrial succinate dehydrogenase iron-sulfur subunit, partial
[Stagonosporopsis cucurbitacearum]
gi|308523791|gb|ADO33735.1| mitochondrial succinate dehydrogenase iron-sulfur subunit, partial
[Stagonosporopsis cucurbitacearum]
Length = 152
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 109/130 (83%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K S+IYPLPHMYVVKDLVPDM FY QY+S++P+LQR + +Y Q+ +DR+KLDGL
Sbjct: 23 KESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRTTPSPDGREYRQTKEDRRKLDGL 82
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN E+YLGPAVL+Q+YRWI DSRDEK A+R + L + S+YRC
Sbjct: 83 YECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRC 142
Query: 277 HTIMNCTRTC 286
+TI+NC+RTC
Sbjct: 143 YTILNCSRTC 152
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 31 CAMNIGGVNTLACISKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI----QRH 85
CAMNI GVNTLAC+ +I + K S+IYPLPHMYVVKDLVPDM FY QY+S+ QR
Sbjct: 1 CAMNIDGVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 60
Query: 86 LGGPWKILGTLTAKNIRSFQ------LSAAASSAVPA------EKPAKYKTFAIYRWNPD 133
P T ++ R L A S++ P+ E YRW D
Sbjct: 61 TPSPDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIAD 120
Query: 134 KPDEKPTMQEYKVDLNNKI 152
DEK E + LNN +
Sbjct: 121 SRDEKKA--ERQDALNNSM 137
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 7 GVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 60
>gi|340546095|gb|AEK51846.1| succinate dehydrogenase complex iron sulfur subunit B [Heteronotia
binoei]
Length = 128
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 110/125 (88%), Gaps = 2/125 (1%)
Query: 149 NNKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQS 206
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L++ D+ G QYLQS
Sbjct: 4 TRRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKKKDESKQGKEQYLQS 63
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
+++R+KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ T +RL Q
Sbjct: 64 IEEREKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDYTEERLAQ 123
Query: 267 LKDPF 271
L+DPF
Sbjct: 124 LEDPF 128
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 23/106 (21%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKI 92
LAC +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQ +L G +
Sbjct: 1 LACTRRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKKKDESKQGKEQY 60
Query: 93 LGTLTAKN----IRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L ++ + + L A S++ P+ Y WN DK
Sbjct: 61 LQSIEEREKLDGLYECILCACCSTSCPS-----------YWWNADK 95
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYK+IQP+L +
Sbjct: 2 ACTRRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKK 49
>gi|381405283|ref|ZP_09929967.1| succinate dehydrogenase, iron sulfur protein [Pantoea sp. Sc1]
gi|380738482|gb|EIB99545.1| succinate dehydrogenase, iron sulfur protein [Pantoea sp. Sc1]
Length = 238
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM+ FYAQY+ I+P+L + EN ++LQS D+R+ LDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMSQFYAQYEKIKPFLLNNGENPPAREHLQSPDEREHLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN EK++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPEKFIGPAGLLAAYRFLIDSRDTETESRLDNLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A + I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM+ FYAQY+ I+ L
Sbjct: 93 PLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM+ FYAQY+ I+P+L
Sbjct: 71 NGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
>gi|308523793|gb|ADO33736.1| mitochondrial succinate dehydrogenase iron-sulfur subunit, partial
[Stagonosporopsis cucurbitacearum]
Length = 152
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 108/130 (83%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K S+IYPLPHMYVVKDLVPDM FY QY+S++P+LQR + +Y Q+ +DR+KLDGL
Sbjct: 23 KESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRTTPSPDGREYRQTKEDRRKLDGL 82
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILCACCSTSCPSYWWN E+YLGPAVL+Q+YRWI DSRDEK A+R + L + S+YRC
Sbjct: 83 YECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIADSRDEKKAERQDALNNSMSLYRC 142
Query: 277 HTIMNCTRTC 286
TI+NC+RTC
Sbjct: 143 RTILNCSRTC 152
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 31 CAMNIGGVNTLACISKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI----QRH 85
CAMNI GVNTLAC+ +I + K S+IYPLPHMYVVKDLVPDM FY QY+S+ QR
Sbjct: 1 CAMNIDGVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 60
Query: 86 LGGPWKILGTLTAKNIRSFQ------LSAAASSAVPA------EKPAKYKTFAIYRWNPD 133
P T ++ R L A S++ P+ E YRW D
Sbjct: 61 TPSPDGREYRQTKEDRRKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLLQSYRWIAD 120
Query: 134 KPDEKPTMQEYKVDLNNKI 152
DEK E + LNN +
Sbjct: 121 SRDEKKA--ERQDALNNSM 137
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G++T A L +I + K S+IYPLPHMYVVKDLVPDM FY QY+S++P+L R+
Sbjct: 7 GVNTLACLCRIPTDTAKESRIYPLPHMYVVKDLVPDMTLFYKQYRSVKPYLQRT 60
>gi|402548949|ref|ZP_10845802.1| succinate dehydrogenase iron-sulfur subunit, partial [SAR86 cluster
bacterium SAR86C]
Length = 217
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 112/144 (77%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
++ PLP + V++DLV DM FYAQY+ I+P+LQ + + LQS +DR KLDGLYEC
Sbjct: 61 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFLQNNT-TAPEQERLQSPEDRDKLDGLYEC 119
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWN +K++GPA L+QAYR+I DSRD +T +RL+ L DPFSVYRCH I
Sbjct: 120 ILCACCSTSCPSFWWNPDKFVGPAALLQAYRFIADSRDLETVERLDALSDPFSVYRCHGI 179
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC CPKGLNP +AI EIK +L
Sbjct: 180 MNCVSVCPKGLNPNKAIGEIKSML 203
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKI--YP 58
MVLD L +K E D ++++RRSCREG+CGS MNI G N LACI+ I + K +KI P
Sbjct: 6 MVLDLLHLLKEE-DESISYRRSCREGVCGSDGMNINGKNGLACITPISSVMKKNKIELRP 64
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LP + V++DLV DM FYAQY+ I+ L
Sbjct: 65 LPGLPVIRDLVVDMTEFYAQYEKIKPFL 92
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
++ PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 61 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFL 92
>gi|424862921|ref|ZP_18286834.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[SAR86 cluster bacterium SAR86A]
gi|400757542|gb|EJP71753.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[SAR86 cluster bacterium SAR86A]
Length = 246
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
++ PLP + V++DLV DM FYAQY+ I+P+LQ ++ + LQS ++R KLDGLYEC
Sbjct: 91 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFLQ-NETTAPEQERLQSPEERDKLDGLYEC 149
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWN +K++GPA L+QAYR++ DSRD KT +RLN L DPFSVYRCH I
Sbjct: 150 ILCACCSTSCPSFWWNPDKFVGPAALLQAYRFLADSRDLKTEERLNDLSDPFSVYRCHGI 209
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC CPKGLNP +AI EIK +L
Sbjct: 210 MNCVNVCPKGLNPNKAIGEIKSML 233
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKI--YP 58
MVLD L +K E D ++++RRSCREG+CGS MNI G N LACI+ I + K +KI P
Sbjct: 36 MVLDLLHLLKEE-DQSISYRRSCREGVCGSDGMNINGKNGLACITPISSVLKKNKIELRP 94
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LP + V++DLV DM FYAQY+ I+ L
Sbjct: 95 LPGLPVIRDLVVDMTEFYAQYEKIKPFL 122
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
++ PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 91 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFL 122
>gi|372277887|ref|ZP_09513923.1| succinate dehydrogenase, iron sulfur protein [Pantoea sp. SL1_M5]
gi|390435887|ref|ZP_10224425.1| succinate dehydrogenase, iron sulfur protein [Pantoea agglomerans
IG1]
Length = 238
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM+ FYAQY+ I+P+L + EN ++LQS D+R+ LDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMSQFYAQYEKIKPFLLNNGENPPAREHLQSPDEREHLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN EK++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPEKFIGPAGLLAAYRFLIDSRDTETEARLDNLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A + I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM+ FYAQY+ I+ L
Sbjct: 93 PLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM+ FYAQY+ I+P+L
Sbjct: 71 NGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
>gi|333926106|ref|YP_004499685.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia sp. AS12]
gi|333931059|ref|YP_004504637.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia plymuthica AS9]
gi|386327929|ref|YP_006024099.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia sp. AS13]
gi|333472666|gb|AEF44376.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia plymuthica AS9]
gi|333490166|gb|AEF49328.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia sp. AS12]
gi|333960262|gb|AEG27035.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Serratia sp. AS13]
Length = 238
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/143 (62%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FY QY+ I+P+LQ D +N ++LQS ++R KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYTQYEKIKPFLQNDGKNPPAREHLQSPEERAKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T +RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLIDSRDTETQERLDDLDDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 31/150 (20%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A K I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALRKGKNKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSI-------------QRHLGGPWKILGTLTAKNIRSF 104
PLP + VV+DLV DM FY QY+ I + HL P + +
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPFLQNDGKNPPAREHLQSPEE---RAKLDGLYEC 149
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ + WNPDK
Sbjct: 150 ILCACCSTSCPS-----------FWWNPDK 168
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 51/113 (45%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPISALRKGKNKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPFL 121
>gi|328874315|gb|EGG22681.1| succinate dehydrogenase [Dictyostelium fasciculatum]
Length = 281
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 115/162 (70%), Gaps = 8/162 (4%)
Query: 149 NNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ--RDKENIGNAQYLQS 206
+ ID N IYPLPHM+VV+DLVPD+ +FY Q+KSI+PWL+ + + LQS
Sbjct: 120 TDSIDGNS--VSIYPLPHMHVVRDLVPDLTHFYQQHKSIRPWLEPAANAPRYNGKELLQS 177
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWN---GEKYLGPAVLMQAYRWIIDSRDEKTADR 263
DR KLDGLYECILCACCSTSCPSYWW+ YLGPAVL+QAYRWI DSRD R
Sbjct: 178 KGDRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYLGPAVLLQAYRWIADSRDSIQKSR 237
Query: 264 LNQLK-DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
L L D VY+CHTI+NCTR CPKGLNP AI++IK LL+
Sbjct: 238 LESLSTDDLKVYKCHTILNCTRVCPKGLNPALAISKIKSLLA 279
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 70/94 (74%), Gaps = 11/94 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISK----IDANDKVSKI 56
M+LDA+I IKN DPTLTFRRSCREGICGSCAMNI G NTLAC K ID N I
Sbjct: 73 MILDAIIHIKNTQDPTLTFRRSCREGICGSCAMNITGSNTLACTKKTTDSIDGNS--VSI 130
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
YPLPHM+VV+DLVPD+ +FY Q+KSI+ PW
Sbjct: 131 YPLPHMHVVRDLVPDLTHFYQQHKSIR-----PW 159
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 2/40 (5%)
Query: 322 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
ID N IYPLPHM+VV+DLVPD+ +FY Q+KSI+PWL
Sbjct: 123 IDGNS--VSIYPLPHMHVVRDLVPDLTHFYQQHKSIRPWL 160
>gi|209879269|ref|XP_002141075.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit
[Cryptosporidium muris RN66]
gi|209556681|gb|EEA06726.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit, putative
[Cryptosporidium muris RN66]
Length = 319
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 110/152 (72%), Gaps = 6/152 (3%)
Query: 155 NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL--QRDKENIGNA----QYLQSLD 208
+D + ++ PLP+ Y++KDL+PDM NFY QYKSI+PWL K N+ + LQS++
Sbjct: 145 SDGIIELRPLPNQYIIKDLIPDMTNFYNQYKSIKPWLIQSNGKHNLDTTGKKIENLQSIE 204
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DRKKLD LYECILCACCSTSCPSYWWN + YLGPA L+QAYRWI DSRD+ RL L
Sbjct: 205 DRKKLDSLYECILCACCSTSCPSYWWNPDYYLGPAALLQAYRWISDSRDDSKLQRLMYLN 264
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
D +YRCH I NCT CPKGLNP AI+ IK
Sbjct: 265 DTMKLYRCHEIFNCTSACPKGLNPASAISNIK 296
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 90/155 (58%), Gaps = 38/155 (24%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVL+ LI IKN++D TL FR+SCREGICGSCAMNI G N+LAC++KI + +D + ++ PL
Sbjct: 95 MVLNGLIHIKNKVDSTLGFRKSCREGICGSCAMNINGKNSLACLTKISSFSDGIIELRPL 154
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGT------LTAKNIRSFQ-------- 105
P+ Y++KDL+PDM NFY QYKSI+ PW I T K I + Q
Sbjct: 155 PNQYIIKDLIPDMTNFYNQYKSIK-----PWLIQSNGKHNLDTTGKKIENLQSIEDRKKL 209
Query: 106 -------LSAAASSAVPAEKPAKYKTFAIYRWNPD 133
L A S++ P+ Y WNPD
Sbjct: 210 DSLYECILCACCSTSCPS-----------YWWNPD 233
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 317 AALHKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
A L KI + +D + ++ PLP+ Y++KDL+PDM NFY QYKSI+PWL +S
Sbjct: 136 ACLTKISSFSDGIIELRPLPNQYIIKDLIPDMTNFYNQYKSIKPWLIQS 184
>gi|418021480|ref|ZP_12660561.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Candidatus Regiella insecticola R5.15]
gi|347603161|gb|EGY28045.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Candidatus Regiella insecticola R5.15]
Length = 238
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FY QY+ I+P+L D +N +YLQS + R KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMTQFYTQYEKIKPYLLNDGKNPPAREYLQSPEQRAKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +TA RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETASRLDDLDDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + + K I
Sbjct: 34 MLLDALIQLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPLSTLIRKGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMTQFYTQYEKIKPYL 121
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL L + K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPLSTLIRKGKKIVIRPLPGLPVVRDLVVDMTQFYTQYEKIKPYL 121
>gi|332141296|ref|YP_004427034.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'Deep ecotype']
gi|406596775|ref|YP_006747905.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
ATCC 27126]
gi|407683783|ref|YP_006798957.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'English Channel 673']
gi|407687710|ref|YP_006802883.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'Balearic Sea AD45']
gi|407700030|ref|YP_006824817.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'Black Sea 11']
gi|410861687|ref|YP_006976921.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
AltDE1]
gi|327551318|gb|AEA98036.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'Deep ecotype']
gi|406374096|gb|AFS37351.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
ATCC 27126]
gi|407245394|gb|AFT74580.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'English Channel 673']
gi|407249177|gb|AFT78362.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'Black Sea 11']
gi|407291090|gb|AFT95402.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
str. 'Balearic Sea AD45']
gi|410818949|gb|AFV85566.1| succinate dehydrogenase catalytic subunit [Alteromonas macleodii
AltDE1]
Length = 236
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 134/229 (58%), Gaps = 50/229 (21%)
Query: 124 TFAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AN 155
TF+IYR+NP+ D KP MQ+Y +++ D +
Sbjct: 4 TFSIYRYNPEV-DAKPRMQDYTLEVEEGQDMMVLDALLALKEQDPTLSFRRSCREGVCGS 62
Query: 156 DKVSK---------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D V+ + PLP + VV+DLV DM FY QY+ I+P+L D
Sbjct: 63 DGVNMNGKNGLACITPLSALGKGKIVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLIND 122
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
+ ++LQS ++R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++ID
Sbjct: 123 SKQPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLID 182
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRD T +RLN L D FSV+RCH IMNC CPKGLNP +AI +IK +L
Sbjct: 183 SRDTATEERLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGQIKSML 231
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 78/148 (52%), Gaps = 29/148 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY-PL 59
MVLDAL+ +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A K + PL
Sbjct: 34 MVLDALLALK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPLSALGKGKIVVRPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI-------------QRHLGGPWKILGTLTAKNIRSFQL 106
P + VV+DLV DM FY QY+ I + HL P + + L
Sbjct: 93 PGLPVVRDLVVDMTQFYTQYEKIKPFLINDSKQPPAREHLQSPEE---RAKLDGLYECIL 149
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P+ + WNPDK
Sbjct: 150 CACCSTSCPS-----------FWWNPDK 166
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 89 VRPLPGLPVVRDLVVDMTQFYTQYEKIKPFL 119
>gi|238898943|ref|YP_002924625.1| succinate dehydrogenase, Fe-S protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466703|gb|ACQ68477.1| succinate dehydrogenase, Fe-S protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 238
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 136/231 (58%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKV-------------------------------------- 146
F+IYR+NPD D+KP MQ+Y +
Sbjct: 5 FSIYRYNPDV-DDKPRMQDYSLPFEEGRDMMLLDALIALKEKDPTLTFRRSCREGVCGSD 63
Query: 147 --DLNNK------------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
++N K I AN K+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GMNMNGKNGLACITPLSSLIKANQKMV-IRPLPGLPVVRDLVVDMAQFYAQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D +N ++LQS ++R KLDGLYECILCACCST+CPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NDGKNPPAREHLQSPEERAKLDGLYECILCACCSTACPSFWWNPDKFVGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T RL L D FSV+RCH IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTQTQTRLEGLDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 81/151 (53%), Gaps = 33/151 (21%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACI----SKIDANDKVSKI 56
M+LDALI +K E DPTLTFRRSCREG+CGS MN+ G N LACI S I AN K+ I
Sbjct: 34 MLLDALIALK-EKDPTLTFRRSCREGVCGSDGMNMNGKNGLACITPLSSLIKANQKMV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSI-------------QRHLGGPWKILGTLTAKNIRS 103
PLP + VV+DLV DM FYAQY+ I + HL P + +
Sbjct: 92 RPLPGLPVVRDLVVDMAQFYAQYEKIKPYLLNDGKNPPAREHLQSPEE---RAKLDGLYE 148
Query: 104 FQLSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S+A P+ + WNPDK
Sbjct: 149 CILCACCSTACPS-----------FWWNPDK 168
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 322 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I AN K+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 83 IKANQKMV-IRPLPGLPVVRDLVVDMAQFYAQYEKIKPYL 121
>gi|308186070|ref|YP_003930201.1| succinate dehydrogenase, iron sulfur protein [Pantoea vagans C9-1]
gi|308056580|gb|ADO08752.1| succinate dehydrogenase, iron sulfur protein [Pantoea vagans C9-1]
Length = 238
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM+ FYAQY+ I+P+L + EN ++LQS D+R+ LDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMSQFYAQYEKIKPFLLNNGENPPAREHLQSPDEREHLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN EK++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPEKFIGPAGLLAAYRFLIDSRDTETDARLDNLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A + I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM+ FYAQY+ I+ L
Sbjct: 93 PLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM+ FYAQY+ I+P+L
Sbjct: 71 NGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYAQYEKIKPFL 121
>gi|300722385|ref|YP_003711671.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus nematophila ATCC
19061]
gi|297628888|emb|CBJ89471.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus nematophila ATCC
19061]
Length = 238
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYK--------------------------------------- 145
F+IYR+NPD D+ P MQ+Y
Sbjct: 5 FSIYRYNPDV-DDVPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLAFRRSCREGVCGSD 63
Query: 146 -VDLNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V++N K + +K I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACVTPISALRRGNKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIRPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNSPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL+ L D FSV+RCH IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETASRLDNLNDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LAC++ I A + +K I
Sbjct: 34 MLLDALIQLK-EQDPTLAFRRSCREGVCGSDGVNMNGKNGLACVTPISALRRGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIRPYL 121
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEQDPTLAFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL + + +K I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGLACVTPISALRRGNKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIRPYL 121
>gi|357158176|ref|XP_003578041.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
3, mitochondrial-like [Brachypodium distachyon]
Length = 304
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 134/247 (54%), Gaps = 51/247 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L+AA K K F IYRWNPD P +P +Q Y VDL
Sbjct: 53 LAAAEEEKQRGGKADTVKEFQIYRWNPDSPG-RPFLQSYSVDLATCGPMVLDVLQKIKSD 111
Query: 151 ---------------------KIDANDKV-------------SKIYPLPHMYVVKDLVPD 176
ID + V + I PLPHM+VVKDLV D
Sbjct: 112 HDSTLAFRRSCREGICGSCSMNIDGVNTVACLKPVDTDTSTATMITPLPHMFVVKDLVVD 171
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ NFY QYKS++PWL+ + +++QS +R+KLDGLYECILCACCST+CPSYWWN
Sbjct: 172 LTNFYQQYKSVEPWLKTKQPAAEGREHVQSPGERRKLDGLYECILCACCSTACPSYWWNS 231
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF-SVYRCHTIMNCTRTCPKGLNPGRA 295
E +LGPA L+ AYRW+ DSRDE +R+ L + + +YRC I +CT TCPK L+P A
Sbjct: 232 EDFLGPAALLHAYRWVSDSRDEYGEERIQALSEGWDKLYRCRMIKSCTATCPKSLDPAAA 291
Query: 296 IAEIKKL 302
I+ +K +
Sbjct: 292 ISALKTM 298
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK-IYPL 59
MVLD L KIK++ D TL FRRSCREGICGSC+MNI GVNT+AC+ +D + + I PL
Sbjct: 100 MVLDVLQKIKSDHDSTLAFRRSCREGICGSCSMNIDGVNTVACLKPVDTDTSTATMITPL 159
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLV D+ NFY QYKS++ PW
Sbjct: 160 PHMFVVKDLVVDLTNFYQQYKSVE-----PW 185
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAA-LHKIDANDKVSK-IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +D + + I PLPHM+VVKDLV D+ NFY QYKS++PWL
Sbjct: 136 GVNTVACLKPVDTDTSTATMITPLPHMFVVKDLVVDLTNFYQQYKSVEPWL 186
>gi|254454915|ref|ZP_05068351.1| succinate dehydrogenase iron-sulfur protein [Octadecabacter
arcticus 238]
gi|198263617|gb|EDY87888.1| succinate dehydrogenase iron-sulfur protein [Octadecabacter
arcticus 238]
Length = 207
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 115/156 (73%), Gaps = 7/156 (4%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D V K+YPLPHM VVKDLVPD+ + YAQY SI+PWL+ D + LQS DR K
Sbjct: 49 DIRDDV-KVYPLPHMQVVKDLVPDLTHAYAQYASIEPWLKTDTPT-PEHERLQSPADRNK 106
Query: 213 LDGLYECILCACCSTSCPSYWWNGEK-----YLGPAVLMQAYRWIIDSRDEKTADRLNQL 267
L+GL C+LC CC+ SCPSYWWNG+K +LGPA L+Q++RWI DSRD+ T +RL L
Sbjct: 107 LEGLDSCVLCFCCTASCPSYWWNGDKDGTDEFLGPAALLQSHRWISDSRDKATDERLEDL 166
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+ PF +YRCHTIMNC TCPKGLNP +AIAEIKK +
Sbjct: 167 EGPFKLYRCHTIMNCAVTCPKGLNPAKAIAEIKKRM 202
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 79/103 (76%), Gaps = 7/103 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G+NTLACI I D D V K+YPL
Sbjct: 1 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIQSISDIRDDV-KVYPL 59
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIR 102
PHM VVKDLVPD+ + YAQY SI+ PW T T ++ R
Sbjct: 60 PHMQVVKDLVPDLTHAYAQYASIE-----PWLKTDTPTPEHER 97
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 313 GLDT-AALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A + I D D V K+YPLPHM VVKDLVPD+ + YAQY SI+PWL
Sbjct: 37 GINTLACIQSISDIRDDV-KVYPLPHMQVVKDLVPDLTHAYAQYASIEPWL 86
>gi|423107380|ref|ZP_17095075.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5243]
gi|423113259|ref|ZP_17100950.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5245]
gi|376389506|gb|EHT02198.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5243]
gi|376389801|gb|EHT02491.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5245]
Length = 238
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 138/230 (60%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F++YR+NPD D+ P MQ+Y ++
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ+ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQTPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T+DRL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETSDRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|261341311|ref|ZP_05969169.1| succinate dehydrogenase, iron-sulfur protein [Enterobacter
cancerogenus ATCC 35316]
gi|288316615|gb|EFC55553.1| succinate dehydrogenase, iron-sulfur protein [Enterobacter
cancerogenus ATCC 35316]
Length = 238
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y +D + D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLDAEDGRDMMLLDALMQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDNRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDAL+++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALMQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 DGRDMMLLDALMQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|37525383|ref|NP_928727.1| succinate dehydrogenase iron-sulfur subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36784810|emb|CAE13722.1| succinate dehydrogenase iron sulfur protein [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 238
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DSAPHMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + A + SK I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSALRRGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIRPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL++L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETASRLDKLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A + SK I
Sbjct: 34 MLLDALIQLK-EQDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSALRRGSKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIRPYL 121
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEQDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + + A + SK I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPVSALRRGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIRPYL 121
>gi|375259710|ref|YP_005018880.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
KCTC 1686]
gi|397656776|ref|YP_006497478.1| succinate dehydrogenase iron-sulfur protein [Klebsiella oxytoca
E718]
gi|402839663|ref|ZP_10888147.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. OBRC7]
gi|421724867|ref|ZP_16164073.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
M5al]
gi|423101964|ref|ZP_17089666.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5242]
gi|423128135|ref|ZP_17115814.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5250]
gi|365909188|gb|AEX04641.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
KCTC 1686]
gi|376390790|gb|EHT03473.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5242]
gi|376395174|gb|EHT07824.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5250]
gi|394345322|gb|AFN31443.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella oxytoca
E718]
gi|402287589|gb|EJU36028.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. OBRC7]
gi|410374361|gb|EKP29036.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
M5al]
Length = 238
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 138/230 (60%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F++YR+NPD D+ P MQ+Y ++
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T++RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETSERLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|194689940|gb|ACF79054.1| unknown [Zea mays]
Length = 202
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
Query: 150 NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KI + S + PLPHM+V+KDLV DM NFY QYKS++PWL+R D + Q+
Sbjct: 45 TKISSASSASTVSPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDPPPQLGKEVPQTKA 104
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDG+YECILCACCSTSCPSYWWN E+YLGPA L+ A RWI DSRD+ T +RL+ +
Sbjct: 105 DRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLDAIN 164
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
D F +YRCHTI NCT CPKGLNP + I IKKL
Sbjct: 165 DEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 198
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDAL+KIKNE DP+LTFRRSCREGICGSCAMNI G N LAC++KI + S + PLP
Sbjct: 1 MVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSASSASTVSPLP 60
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKS++ PW
Sbjct: 61 HMFVIKDLVVDMTNFYNQYKSVE-----PW 85
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + S + PLPHM+V+KDLV DM NFY QYKS++PWL R
Sbjct: 42 ACLTKISSASSASTVSPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKR 88
>gi|238756028|ref|ZP_04617352.1| Succinate dehydrogenase iron-sulfur protein [Yersinia ruckeri ATCC
29473]
gi|238705753|gb|EEP98146.1| Succinate dehydrogenase iron-sulfur protein [Yersinia ruckeri ATCC
29473]
Length = 238
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 136/231 (58%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYSLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK------------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
+N K ++ N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSALVNGNKKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D +N ++LQS ++R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NDGKNPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETQPRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA---NDKVSKIY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A +K I
Sbjct: 34 MLLDALIQLK-EQDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSALVNGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEQDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLD--TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL T ++ N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPVSALVNGNKKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|377578100|ref|ZP_09807079.1| succinate dehydrogenase iron-sulfur protein subunit [Escherichia
hermannii NBRC 105704]
gi|377540425|dbj|GAB52244.1| succinate dehydrogenase iron-sulfur protein subunit [Escherichia
hermannii NBRC 105704]
Length = 238
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 113/143 (79%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FYAQY+ I+P+L + +N ++LQS + R+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQSPEQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +TA+RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETANRLDNLSDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI IK +L
Sbjct: 211 NCVSVCPKGLNPTKAIGHIKTML 233
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I A + I
Sbjct: 34 MLLDALIQLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPISALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGLACITPISALGNGKQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|290474112|ref|YP_003466989.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus bovienii
SS-2004]
gi|289173422|emb|CBJ80199.1| succinate dehydrogenase, Fe-S protein [Xenorhabdus bovienii
SS-2004]
Length = 238
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYK--------------------------------------- 145
F+IYR+NPD D P MQ+Y
Sbjct: 5 FSIYRYNPDV-DNAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63
Query: 146 -VDLNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V++N K + +K I PLP + VV+DLV DM+ FY QY+ I+P+L
Sbjct: 64 GVNMNGKNGLACVTPVSVLRRGNKKIVIRPLPGLPVVRDLVVDMSQFYTQYEKIRPYLIN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETASRLDGLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LAC++ + + +K I
Sbjct: 34 MLLDALIQLK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACVTPVSVLRRGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM+ FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMSQFYTQYEKIRPYL 121
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEQDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL + + +K I PLP + VV+DLV DM+ FY QY+ I+P+L
Sbjct: 71 NGLACVTPVSVLRRGNKKIVIRPLPGLPVVRDLVVDMSQFYTQYEKIRPYL 121
>gi|22126944|ref|NP_670367.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
KIM10+]
gi|45440878|ref|NP_992417.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|51595490|ref|YP_069681.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108806587|ref|YP_650503.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
Antiqua]
gi|108813046|ref|YP_648813.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
Nepal516]
gi|145599850|ref|YP_001163926.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
Pestoides F]
gi|149366888|ref|ZP_01888922.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis
CA88-4125]
gi|153948150|ref|YP_001401845.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162420684|ref|YP_001605909.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
Angola]
gi|165924723|ref|ZP_02220555.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165938284|ref|ZP_02226842.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011615|ref|ZP_02232513.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166211519|ref|ZP_02237554.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400038|ref|ZP_02305556.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167419712|ref|ZP_02311465.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424205|ref|ZP_02315958.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|170025191|ref|YP_001721696.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
pseudotuberculosis YPIII]
gi|186894543|ref|YP_001871655.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218928280|ref|YP_002346155.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis CO92]
gi|229841048|ref|ZP_04461207.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843152|ref|ZP_04463298.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229893989|ref|ZP_04509175.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Pestoides A]
gi|229903487|ref|ZP_04518600.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Nepal516]
gi|270487269|ref|ZP_06204343.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis KIM
D27]
gi|294503119|ref|YP_003567181.1| succinate dehydrogenase catalytic subunit [Yersinia pestis Z176003]
gi|384121559|ref|YP_005504179.1| succinate dehydrogenase catalytic subunit [Yersinia pestis D106004]
gi|384125626|ref|YP_005508240.1| succinate dehydrogenase catalytic subunit [Yersinia pestis D182038]
gi|384140815|ref|YP_005523517.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis A1122]
gi|384413747|ref|YP_005623109.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420545741|ref|ZP_15043808.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-01]
gi|420551048|ref|ZP_15048558.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-02]
gi|420556564|ref|ZP_15053440.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-03]
gi|420562146|ref|ZP_15058332.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-04]
gi|420567165|ref|ZP_15062868.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-05]
gi|420572817|ref|ZP_15068000.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-06]
gi|420578148|ref|ZP_15072825.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-07]
gi|420583499|ref|ZP_15077693.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-08]
gi|420588650|ref|ZP_15082335.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-09]
gi|420593959|ref|ZP_15087118.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-10]
gi|420599646|ref|ZP_15092202.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-11]
gi|420605131|ref|ZP_15097108.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-12]
gi|420610484|ref|ZP_15101946.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-13]
gi|420615790|ref|ZP_15106647.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-14]
gi|420621174|ref|ZP_15111393.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-15]
gi|420626232|ref|ZP_15115975.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-16]
gi|420631437|ref|ZP_15120683.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-19]
gi|420636533|ref|ZP_15125247.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-25]
gi|420642115|ref|ZP_15130287.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-29]
gi|420647258|ref|ZP_15134996.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-32]
gi|420652905|ref|ZP_15140061.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-34]
gi|420658423|ref|ZP_15145027.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-36]
gi|420663742|ref|ZP_15149780.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-42]
gi|420668720|ref|ZP_15154292.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-45]
gi|420674020|ref|ZP_15159117.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-46]
gi|420679570|ref|ZP_15164150.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-47]
gi|420684822|ref|ZP_15168853.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-48]
gi|420689986|ref|ZP_15173433.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-52]
gi|420695793|ref|ZP_15178516.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-53]
gi|420701184|ref|ZP_15183125.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-54]
gi|420707178|ref|ZP_15187996.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-55]
gi|420712496|ref|ZP_15192791.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-56]
gi|420717902|ref|ZP_15197528.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-58]
gi|420723501|ref|ZP_15202344.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-59]
gi|420729118|ref|ZP_15207356.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-60]
gi|420734177|ref|ZP_15211923.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-61]
gi|420739650|ref|ZP_15216855.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-63]
gi|420744990|ref|ZP_15221555.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-64]
gi|420750778|ref|ZP_15226505.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-65]
gi|420756045|ref|ZP_15231080.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-66]
gi|420761895|ref|ZP_15235851.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-71]
gi|420767136|ref|ZP_15240581.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-72]
gi|420772125|ref|ZP_15245062.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-76]
gi|420777548|ref|ZP_15249908.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-88]
gi|420783073|ref|ZP_15254744.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-89]
gi|420788418|ref|ZP_15259454.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-90]
gi|420793893|ref|ZP_15264397.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-91]
gi|420799013|ref|ZP_15269002.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-92]
gi|420804360|ref|ZP_15273812.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-93]
gi|420809611|ref|ZP_15278570.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-94]
gi|420815318|ref|ZP_15283683.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-95]
gi|420820490|ref|ZP_15288366.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-96]
gi|420825585|ref|ZP_15292919.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-98]
gi|420831346|ref|ZP_15298129.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-99]
gi|420836209|ref|ZP_15302513.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-100]
gi|420841348|ref|ZP_15307170.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-101]
gi|420846970|ref|ZP_15312244.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-102]
gi|420852388|ref|ZP_15317016.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-103]
gi|420857905|ref|ZP_15321707.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-113]
gi|421762563|ref|ZP_16199360.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis INS]
gi|21959985|gb|AAM86618.1|AE013908_1 succinate dehydrogenase, iron sulfur protein [Yersinia pestis
KIM10+]
gi|45435736|gb|AAS61294.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51588772|emb|CAH20386.1| succinate dehydrogenase iron-sulfur protein [Yersinia
pseudotuberculosis IP 32953]
gi|108776694|gb|ABG19213.1| succinate dehydrogenase subunit B [Yersinia pestis Nepal516]
gi|108778500|gb|ABG12558.1| succinate dehydrogenase subunit B [Yersinia pestis Antiqua]
gi|115346891|emb|CAL19778.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis CO92]
gi|145211546|gb|ABP40953.1| succinate dehydrogenase subunit B [Yersinia pestis Pestoides F]
gi|149291262|gb|EDM41337.1| succinate dehydrogenase iron-sulfur protein [Yersinia pestis
CA88-4125]
gi|152959645|gb|ABS47106.1| succinate dehydrogenase, iron-sulfur protein [Yersinia
pseudotuberculosis IP 31758]
gi|162353499|gb|ABX87447.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
Angola]
gi|165913662|gb|EDR32281.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|165923783|gb|EDR40915.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989563|gb|EDR41864.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166207290|gb|EDR51770.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166962453|gb|EDR58474.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167050746|gb|EDR62154.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057054|gb|EDR66817.1| succinate dehydrogenase, iron-sulfur protein [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751725|gb|ACA69243.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Yersinia pseudotuberculosis YPIII]
gi|186697569|gb|ACC88198.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Yersinia pseudotuberculosis PB1/+]
gi|229679257|gb|EEO75360.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Nepal516]
gi|229689499|gb|EEO81560.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697414|gb|EEO87461.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703874|gb|EEO90887.1| succinate dehydrogenase, FeS subunit [Yersinia pestis Pestoides A]
gi|262361155|gb|ACY57876.1| succinate dehydrogenase catalytic subunit [Yersinia pestis D106004]
gi|262365290|gb|ACY61847.1| succinate dehydrogenase catalytic subunit [Yersinia pestis D182038]
gi|270335773|gb|EFA46550.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis KIM
D27]
gi|294353578|gb|ADE63919.1| succinate dehydrogenase catalytic subunit [Yersinia pestis Z176003]
gi|320014251|gb|ADV97822.1| succinate dehydrogenase, FeS subunit [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342855944|gb|AEL74497.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis A1122]
gi|391429775|gb|EIQ91587.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-01]
gi|391430930|gb|EIQ92580.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-02]
gi|391433150|gb|EIQ94516.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-03]
gi|391445764|gb|EIR05862.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-04]
gi|391446633|gb|EIR06660.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-05]
gi|391450538|gb|EIR10162.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-06]
gi|391462156|gb|EIR20703.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-07]
gi|391463317|gb|EIR21734.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-08]
gi|391465395|gb|EIR23596.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-09]
gi|391478829|gb|EIR35705.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-10]
gi|391479923|gb|EIR36655.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-11]
gi|391480080|gb|EIR36789.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-12]
gi|391494083|gb|EIR49361.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-13]
gi|391495190|gb|EIR50315.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-15]
gi|391497997|gb|EIR52808.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-14]
gi|391509883|gb|EIR63465.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-16]
gi|391510755|gb|EIR64255.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-19]
gi|391515002|gb|EIR68063.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-25]
gi|391525489|gb|EIR77626.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-29]
gi|391528297|gb|EIR80130.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-34]
gi|391529330|gb|EIR81038.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-32]
gi|391542011|gb|EIR92512.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-36]
gi|391543800|gb|EIR94096.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-42]
gi|391544783|gb|EIR94956.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-45]
gi|391558896|gb|EIS07736.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-46]
gi|391559528|gb|EIS08293.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-47]
gi|391560786|gb|EIS09384.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-48]
gi|391574132|gb|EIS21080.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-52]
gi|391574730|gb|EIS21578.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-53]
gi|391586386|gb|EIS31689.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-55]
gi|391586938|gb|EIS32181.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-54]
gi|391590024|gb|EIS34836.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-56]
gi|391603390|gb|EIS46585.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-60]
gi|391603754|gb|EIS46905.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-58]
gi|391604961|gb|EIS47902.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-59]
gi|391617733|gb|EIS59247.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-61]
gi|391618439|gb|EIS59867.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-63]
gi|391625370|gb|EIS65879.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-64]
gi|391629463|gb|EIS69396.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-65]
gi|391640848|gb|EIS79345.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-71]
gi|391643450|gb|EIS81620.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-72]
gi|391643460|gb|EIS81629.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-66]
gi|391653116|gb|EIS90119.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-76]
gi|391658811|gb|EIS95179.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-88]
gi|391663799|gb|EIS99607.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-89]
gi|391665850|gb|EIT01391.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-90]
gi|391671961|gb|EIT06851.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-91]
gi|391683954|gb|EIT17683.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-93]
gi|391685403|gb|EIT18948.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-92]
gi|391686287|gb|EIT19728.1| succinate dehydrogenase and fumarate reductase iron-sulfur family
protein [Yersinia pestis PY-94]
gi|391697989|gb|EIT30341.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-95]
gi|391701668|gb|EIT33644.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-96]
gi|391702657|gb|EIT34520.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-98]
gi|391712158|gb|EIT43062.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis PY-99]
gi|391718544|gb|EIT48780.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-100]
gi|391718951|gb|EIT49146.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-101]
gi|391729790|gb|EIT58745.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-102]
gi|391732765|gb|EIT61293.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-103]
gi|391736408|gb|EIT64439.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis
PY-113]
gi|411176769|gb|EKS46784.1| succinate dehydrogenase iron-sulfur subunit [Yersinia pestis INS]
Length = 238
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y +D
Sbjct: 5 FSIYRYNPDV-DNAPHMQDYTLDAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETASRLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A K +K I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|419957821|ref|ZP_14473887.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
subsp. cloacae GS1]
gi|388607979|gb|EIM37183.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
subsp. cloacae GS1]
Length = 238
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYK--------------------------------------- 145
F++YR+NPD D+ P MQ+Y
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 146 -VDLNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V++N K I A ++ + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALNRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETENRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A ++ + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALNRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|145532473|ref|XP_001451992.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419669|emb|CAK84595.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 111/144 (77%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PL HM+VVKDLV DM NFY QYK+I P+L+R GN +Y+QS++DRK LDGLYEC+
Sbjct: 57 ITPLGHMFVVKDLVVDMTNFYTQYKTIDPYLKRKSPKEGNKEYIQSVEDRKLLDGLYECV 116
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWW+ ++YLGPAVLMQAYRWI+DSRDE T +RL +L + V C I
Sbjct: 117 LCACCSTSCPSYWWHPDRYLGPAVLMQAYRWIVDSRDEYTDERLEKLAEDVKVEDCQNIG 176
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLS 304
C+ TCPKGL+P R++ + KL+
Sbjct: 177 MCSFTCPKGLDPQRSMNHLMKLIE 200
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M LDAL+ IK+ D +L+ RRSCREGICGSC+MN G++ LACI ID + + + I PL
Sbjct: 1 MYLDALLYIKDNYDSSLSLRRSCREGICGSCSMNCNGLHKLACIHAIDTDLTQPAYITPL 60
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL-------GGPWKILGTLTAK---NIRSFQLSAA 109
HM+VVKDLV DM NFY QYK+I +L G I K + L A
Sbjct: 61 GHMFVVKDLVVDMTNFYTQYKTIDPYLKRKSPKEGNKEYIQSVEDRKLLDGLYECVLCAC 120
Query: 110 ASSAVPAE--KPAKYKTFAI----YRWNPDKPDE 137
S++ P+ P +Y A+ YRW D DE
Sbjct: 121 CSTSCPSYWWHPDRYLGPAVLMQAYRWIVDSRDE 154
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A +H ID + + + I PL HM+VVKDLV DM NFY QYK+I P+L R
Sbjct: 42 ACIHAIDTDLTQPAYITPLGHMFVVKDLVVDMTNFYTQYKTIDPYLKR 89
>gi|350921971|emb|CCD22040.1| SdhD protein [Serratia sp. ATCC 39006]
Length = 238
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 134/231 (58%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID------------------------------- 153
F+IYR+NPD D+ P MQ+Y +D++ D
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYSLDVDAGRDMMLLDALIQLKEQDPTLAFRRSCREGVCGSD 63
Query: 154 ---------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
N+K+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISSLQRGNNKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ N ++LQS + R KLDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NNGRNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETQARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKI 56
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I + N+K+ I
Sbjct: 34 MLLDALIQLK-EQDPTLAFRRSCREGVCGSDGVNMNGKNGLACITPISSLQRGNNKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 28/123 (22%)
Query: 246 MQAYRWIIDS-RDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y +D+ RD D L QLK DP +R R+C +G+
Sbjct: 20 MQDYSLDVDAGRDMMLLDALIQLKEQDPTLAFR--------RSCREGVCGS--------- 62
Query: 303 LSGLVKKDKPGLD----TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQ 358
G+ K GL ++L + N+K+ I PLP + VV+DLV DM FYAQY+ I+
Sbjct: 63 -DGVNMNGKNGLACITPISSLQR--GNNKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIK 118
Query: 359 PWL 361
P+L
Sbjct: 119 PYL 121
>gi|242238589|ref|YP_002986770.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech703]
gi|242130646|gb|ACS84948.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech703]
Length = 238
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 133/231 (57%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID------------------------------- 153
F+IYR+NPD D P MQ+Y ++ D
Sbjct: 5 FSIYRYNPDV-DNAPRMQDYTLEAEEGRDMMLLDALIQLKEQDPTLSFRRSCREGVCGSD 63
Query: 154 ---------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
+N K+ I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSTLRGSNGKIV-IRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ +N ++LQS D R+KLDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NNGKNPPAREHLQSPDQREKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +TA RL+ L D FSV+RCH IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETASRLDDLNDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID----ANDKVSKI 56
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + +N K+ I
Sbjct: 34 MLLDALIQLK-EQDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSTLRGSNGKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 92 RPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEQDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL + + ++ I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGLACITPVSTLRGSNGKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|326500490|dbj|BAK06334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 134/247 (54%), Gaps = 51/247 (20%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN--------------- 150
L+AA + KP K F IYRWNPD +P +Q Y VDL
Sbjct: 53 LAAAEEEKKRSGKPTTVKEFQIYRWNPD-AHGRPFLQSYFVDLGTCGPMVLDVLQKIKSE 111
Query: 151 ---------------------KIDANDKV-------------SKIYPLPHMYVVKDLVPD 176
ID + V + I PLPHMYVVKDLV D
Sbjct: 112 HDSTLAFRRSCREGICGSCSMNIDGVNTVACLKSIDTDTSTATMITPLPHMYVVKDLVVD 171
Query: 177 MNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNG 236
+ NFY QYKSI+PWL+ + ++ QS +R+KLDGLYECILCACCST+CPSYWWN
Sbjct: 172 LTNFYQQYKSIEPWLKTKRGAPEGREHAQSPAERRKLDGLYECILCACCSTACPSYWWNS 231
Query: 237 EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPF-SVYRCHTIMNCTRTCPKGLNPGRA 295
E +LGPA L+ AYRW+ DSRD+ +R+ L + + +YRC I +CT TCPK L+P A
Sbjct: 232 EDFLGPAALLHAYRWVSDSRDDYGEERIQALSEGWDKLYRCRMIKSCTATCPKSLDPATA 291
Query: 296 IAEIKKL 302
I+ +K +
Sbjct: 292 ISALKTM 298
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK-IYPL 59
MVLD L KIK+E D TL FRRSCREGICGSC+MNI GVNT+AC+ ID + + I PL
Sbjct: 100 MVLDVLQKIKSEHDSTLAFRRSCREGICGSCSMNIDGVNTVACLKSIDTDTSTATMITPL 159
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLV D+ NFY QYKSI+ PW
Sbjct: 160 PHMYVVKDLVVDLTNFYQQYKSIE-----PW 185
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 313 GLDTAA-LHKIDANDKVSK-IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L ID + + I PLPHMYVVKDLV D+ NFY QYKSI+PWL
Sbjct: 136 GVNTVACLKSIDTDTSTATMITPLPHMYVVKDLVVDLTNFYQQYKSIEPWL 186
>gi|295096569|emb|CBK85659.1| succinate dehydrogenase subunit B [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 238
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y ++ D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISVLQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETENRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I + + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISVLQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|365969571|ref|YP_004951132.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
EcWSU1]
gi|365748484|gb|AEW72711.1| Succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
EcWSU1]
Length = 238
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYK--------------------------------------- 145
F++YR+NPD D+ P MQ+Y
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 146 -VDLNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V++N K I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRAGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRAGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRAGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|270263771|ref|ZP_06192040.1| succinate dehydrogenase iron-sulfur subunit [Serratia odorifera
4Rx13]
gi|421782199|ref|ZP_16218658.1| succinate dehydrogenase iron-sulfur protein [Serratia plymuthica
A30]
gi|270042655|gb|EFA15750.1| succinate dehydrogenase iron-sulfur subunit [Serratia odorifera
4Rx13]
gi|407755755|gb|EKF65879.1| succinate dehydrogenase iron-sulfur protein [Serratia plymuthica
A30]
Length = 238
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 134/231 (58%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID------------------------------- 153
F+IYR+NPD D+ P MQ+Y ++ + D
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYTLEAEDGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 154 ---------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
N+K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALRKGNNKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D +N ++LQS + R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NDGKNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETQERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKI 56
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A N+K+ I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALRKGNNKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 54/114 (47%), Gaps = 27/114 (23%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLD----TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL +AL K N+K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPISALRK--GNNKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|291616727|ref|YP_003519469.1| SdhB [Pantoea ananatis LMG 20103]
gi|378768075|ref|YP_005196545.1| succinate dehydrogenase, iron sulfur protein [Pantoea ananatis LMG
5342]
gi|386015092|ref|YP_005933371.1| succinate dehydrogenase iron- sulfur protein SdhB [Pantoea ananatis
AJ13355]
gi|386080176|ref|YP_005993701.1| succinate dehydrogenase iron-sulfur protein SdhB [Pantoea ananatis
PA13]
gi|291151757|gb|ADD76341.1| SdhB [Pantoea ananatis LMG 20103]
gi|327393153|dbj|BAK10575.1| succinate dehydrogenase iron- sulfur protein SdhB [Pantoea ananatis
AJ13355]
gi|354989357|gb|AER33481.1| succinate dehydrogenase iron-sulfur protein SdhB [Pantoea ananatis
PA13]
gi|365187558|emb|CCF10508.1| succinate dehydrogenase, iron sulfur protein [Pantoea ananatis LMG
5342]
Length = 238
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNK-----IDANDKVSK------------------- 160
F+IYR+NPD D+KP MQ+Y ++ + +DA ++ +
Sbjct: 5 FSIYRYNPDV-DDKPRMQDYTLEAEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63
Query: 161 ---------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPFLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ EN ++LQS +R+ LDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGENPPAREHLQSPGEREHLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDARLDNLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A + I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPFL 121
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPFL 121
>gi|401762822|ref|YP_006577829.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
subsp. cloacae ENHKU01]
gi|400174356|gb|AFP69205.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
subsp. cloacae ENHKU01]
Length = 238
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y ++ D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETESRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|398800357|ref|ZP_10559629.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. GM01]
gi|398095524|gb|EJL85860.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. GM01]
Length = 238
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NP+ D KP MQEY ++
Sbjct: 5 FSIYRYNPEV-DAKPRMQEYTLESEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A SK I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALGNGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPFLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ EN ++LQS +R+ LDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGENPPAREHLQSPAEREHLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETNARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I A SK I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPISALGNGSKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPFL 121
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A SK I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALGNGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPFL 121
>gi|317047344|ref|YP_004114992.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. At-9b]
gi|316948961|gb|ADU68436.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. At-9b]
Length = 238
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNK-----IDANDKVSK------------------- 160
F+IYR+NP+ D+ P MQEY ++ + +DA K+ +
Sbjct: 5 FSIYRYNPEV-DDAPRMQEYSLEAEDGRDMMLLDALIKLKEKDPTLAFRRSCREGVCGSD 63
Query: 161 ---------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSALGNGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ EN ++LQS DR+ LDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGENPPAREHLQSPADREHLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALIK+K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A SK I
Sbjct: 34 MLLDALIKLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGSKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIKLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + + A SK I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPVSALGNGSKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|354722581|ref|ZP_09036796.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter mori LMG
25706]
Length = 238
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y ++ D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALMQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDNRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDAL+++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALMQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALMQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|429092397|ref|ZP_19155033.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
dublinensis 1210]
gi|426742877|emb|CCJ81146.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
dublinensis 1210]
Length = 237
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 134/229 (58%), Gaps = 51/229 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y +D
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLDQEEGRDMMLLDAMLLKEKDPSLSFRRSCREGVCGSDG 63
Query: 148 --LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
+N K + A + I PLP + V++DLV DM FYAQY+ I+P+L +
Sbjct: 64 LNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNN 123
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++ID
Sbjct: 124 GHNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLID 183
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 SRDTETNERLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 232
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACI---SKIDANDKVSKIY 57
M+LDA++ E DP+L+FRRSCREG+CGS +N+ G N LACI S + A + I
Sbjct: 34 MLLDAMLL--KEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPVSSLGAGKQKIVIR 91
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 92 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 120
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 305 GLVKKDKPGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL + + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 63 GLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 120
>gi|334122841|ref|ZP_08496876.1| succinate dehydrogenase [Enterobacter hormaechei ATCC 49162]
gi|333391708|gb|EGK62818.1| succinate dehydrogenase [Enterobacter hormaechei ATCC 49162]
Length = 238
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y ++ D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETETRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|333892969|ref|YP_004466844.1| succinate dehydrogenase catalytic subunit [Alteromonas sp. SN2]
gi|332992987|gb|AEF03042.1| succinate dehydrogenase catalytic subunit [Alteromonas sp. SN2]
Length = 236
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 132/228 (57%), Gaps = 50/228 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F+IYR+NPD D KP MQ+Y +++ D +D
Sbjct: 5 FSIYRYNPDV-DNKPRMQDYTLEVEEGRDMMVLDALIALKEQDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK---------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
V+ + PLP + VV+DLV DM FY QY+ I+P+L D
Sbjct: 64 GVNMNGKNGLACITPLSALGKSKVVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDD 123
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+ ++LQS ++R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++IDS
Sbjct: 124 KQPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDS 183
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RD T +RLN L D FSV+RCH IMNC CPKGLNP +AI IK +L
Sbjct: 184 RDTATDERLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSML 231
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 78/148 (52%), Gaps = 29/148 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY-PL 59
MVLDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A K + PL
Sbjct: 34 MVLDALIALK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPLSALGKSKVVVRPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI-------------QRHLGGPWKILGTLTAKNIRSFQL 106
P + VV+DLV DM FY QY+ I + HL P + + L
Sbjct: 93 PGLPVVRDLVVDMTQFYTQYEKIKPFLINDDKQPPAREHLQSPEE---RAKLDGLYECIL 149
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P+ + WNPDK
Sbjct: 150 CACCSTSCPS-----------FWWNPDK 166
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 89 VRPLPGLPVVRDLVVDMTQFYTQYEKIKPFL 119
>gi|398794403|ref|ZP_10554465.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. YR343]
gi|398208664|gb|EJM95375.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pantoea sp. YR343]
Length = 238
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NP+ D+KP MQEY ++
Sbjct: 5 FSIYRYNPEV-DDKPRMQEYTLESEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A +K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALGNGTKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPFLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ EN ++LQS +R+ LDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGENPPAREHLQSPAEREHLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETNARLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I A +K I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPISALGNGTKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPFL 121
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A +K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALGNGTKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPFL 121
>gi|453062202|gb|EMF03193.1| succinate dehydrogenase iron-sulfur subunit [Serratia marcescens
VGH107]
Length = 238
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 132/231 (57%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID------------------------------- 153
F+IYR+NPD D+ P MQ+Y ++ D
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 154 ---------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISSLRKGNGKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D +N ++LQS + R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NDGKNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETQERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKI 56
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I + N K+ I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISSLRKGNGKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 27/114 (23%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLD----TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL ++L K N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPISSLRK--GNGKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|448241000|ref|YP_007405053.1| succinate dehydrogenase, FeS subunit [Serratia marcescens WW4]
gi|445211364|gb|AGE17034.1| succinate dehydrogenase, FeS subunit [Serratia marcescens WW4]
Length = 238
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 132/231 (57%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID------------------------------- 153
F+IYR+NPD D+ P MQ+Y ++ D
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 154 ---------------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSSLRKGNGKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
D +N ++LQS + R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NDGKNPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 183 IDSRDTETQERLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKI 56
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + + N K+ I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSSLRKGNGKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 27/114 (23%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLD----TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL ++L K N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGLACITPVSSLRK--GNGKIV-IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|152969295|ref|YP_001334404.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238893762|ref|YP_002918496.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|262041213|ref|ZP_06014425.1| succinate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329998777|ref|ZP_08303212.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. MS
92-3]
gi|365138994|ref|ZP_09345575.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp.
4_1_44FAA]
gi|378977727|ref|YP_005225868.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|386033871|ref|YP_005953784.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
KCTC 2242]
gi|419976383|ref|ZP_14491781.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419977892|ref|ZP_14493190.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419984642|ref|ZP_14499787.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419993171|ref|ZP_14508117.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419996768|ref|ZP_14511568.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420002833|ref|ZP_14517482.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420006818|ref|ZP_14521314.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420012626|ref|ZP_14526939.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420020265|ref|ZP_14534454.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420024151|ref|ZP_14538165.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420031140|ref|ZP_14544963.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420036225|ref|ZP_14549886.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420041981|ref|ZP_14555476.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420047075|ref|ZP_14560393.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420054133|ref|ZP_14567308.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420058893|ref|ZP_14571903.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420064243|ref|ZP_14577053.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420069612|ref|ZP_14582267.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420076240|ref|ZP_14588712.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420082739|ref|ZP_14595032.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421912969|ref|ZP_16342673.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421918416|ref|ZP_16347945.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424829667|ref|ZP_18254395.1| succinate dehydrogenase, iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|424934411|ref|ZP_18352783.1| Succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|425077615|ref|ZP_18480718.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425080549|ref|ZP_18483646.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|425088248|ref|ZP_18491341.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090610|ref|ZP_18493695.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150065|ref|ZP_18997855.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428933956|ref|ZP_19007493.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
JHCK1]
gi|428933988|ref|ZP_19007524.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
JHCK1]
gi|428941034|ref|ZP_19014096.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
VA360]
gi|449060895|ref|ZP_21738433.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
hvKP1]
gi|150954144|gb|ABR76174.1| succinate dehydrogenase catalytic subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238546078|dbj|BAH62429.1| succinate dehydrogenase catalytic subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259041442|gb|EEW42501.1| succinate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538563|gb|EGF64668.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. MS
92-3]
gi|339760999|gb|AEJ97219.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
KCTC 2242]
gi|363654679|gb|EHL93568.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp.
4_1_44FAA]
gi|364517138|gb|AEW60266.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397340688|gb|EJJ33884.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397353432|gb|EJJ46506.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397353619|gb|EJJ46687.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397359143|gb|EJJ51845.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397364176|gb|EJJ56809.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397370483|gb|EJJ63057.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397381502|gb|EJJ73673.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397385665|gb|EJJ77760.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397388263|gb|EJJ80252.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397399534|gb|EJJ91186.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397400880|gb|EJJ92518.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397407044|gb|EJJ98447.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397417540|gb|EJK08705.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397417834|gb|EJK08997.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397423409|gb|EJK14341.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397433852|gb|EJK24495.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397436217|gb|EJK26811.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397442860|gb|EJK33202.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397447345|gb|EJK37539.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397451927|gb|EJK42004.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|405590594|gb|EKB64107.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405601340|gb|EKB74493.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405606194|gb|EKB79189.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|405614294|gb|EKB87015.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808598|gb|EKF79849.1| Succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|410113194|emb|CCM85298.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410119278|emb|CCM90570.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414707092|emb|CCN28796.1| succinate dehydrogenase, iron-sulfur subunit [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|426301170|gb|EKV63421.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
VA360]
gi|426303890|gb|EKV66048.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
JHCK1]
gi|426303967|gb|EKV66123.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
JHCK1]
gi|427539956|emb|CCM93993.1| Succinate dehydrogenase iron-sulfur protein [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448873524|gb|EMB08611.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
hvKP1]
Length = 238
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 138/230 (60%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T++RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETSERLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|238765257|ref|ZP_04626186.1| Succinate dehydrogenase iron-sulfur protein [Yersinia kristensenii
ATCC 33638]
gi|238696529|gb|EEP89317.1| Succinate dehydrogenase iron-sulfur protein [Yersinia kristensenii
ATCC 33638]
Length = 238
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DNAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETAARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A K +K I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|345298376|ref|YP_004827734.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Enterobacter asburiae LF7a]
gi|345092313|gb|AEN63949.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Enterobacter asburiae LF7a]
Length = 238
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y ++ D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALMQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDAL+++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALMQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALMQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|296103347|ref|YP_003613493.1| succinate dehydrogenase iron-sulfur protein [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|392978157|ref|YP_006476745.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
subsp. dissolvens SDM]
gi|401676536|ref|ZP_10808520.1| succinate dehydrogenase iron-sulfur protein [Enterobacter sp. SST3]
gi|29418062|gb|AAO39688.1| succinate dehydrogenase iron-sulfur protein [Enterobacter cloacae]
gi|295057806|gb|ADF62544.1| succinate dehydrogenase iron-sulfur protein [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|392324090|gb|AFM59043.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter cloacae
subsp. dissolvens SDM]
gi|400216220|gb|EJO47122.1| succinate dehydrogenase iron-sulfur protein [Enterobacter sp. SST3]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F++YR+NPD D+ P MQ+Y ++ D +D
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ G+ K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGVNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|294637437|ref|ZP_06715727.1| succinate dehydrogenase, iron-sulfur protein [Edwardsiella tarda
ATCC 23685]
gi|451966086|ref|ZP_21919341.1| succinate dehydrogenase iron-sulfur protein subunit [Edwardsiella
tarda NBRC 105688]
gi|291089378|gb|EFE21939.1| succinate dehydrogenase, iron-sulfur protein [Edwardsiella tarda
ATCC 23685]
gi|451315335|dbj|GAC64703.1| succinate dehydrogenase iron-sulfur protein subunit [Edwardsiella
tarda NBRC 105688]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 130/230 (56%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F+IYR+NPD D P MQ+Y ++ D +D
Sbjct: 5 FSIYRYNPDV-DSAPHMQDYTLEAEEGRDMMLLDALIRLKEQDPTLAFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALRQGGRKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLIN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +YLQS ++R KLDGLYECILCACCSTSCPS+WWN +K++GP+ L+ AYR++I
Sbjct: 124 DGRTPQVREYLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFVGPSGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD TA RL+ L D FSV+RCH IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTATAQRLDGLDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 25/147 (17%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALIRLK-EQDPTLAFRRSCREGVCGSDGVNMNGKNGLACITPISALRQGGRKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL---GGPWKILGTLTAKNIRS-------FQLS 107
PLP + VV+DLV DM FYAQY+ I+ +L G ++ L + R+ L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYLINDGRTPQVREYLQSPEERAKLDGLYECILC 152
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P+ + WNPDK
Sbjct: 153 ACCSTSCPS-----------FWWNPDK 168
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|449458373|ref|XP_004146922.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
3, mitochondrial-like [Cucumis sativus]
gi|449522744|ref|XP_004168386.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
3, mitochondrial-like [Cucumis sativus]
Length = 293
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 129/230 (56%), Gaps = 50/230 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F IYRWNP P+ KP + + +DL+
Sbjct: 52 KEFKIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 111
Query: 151 ----------------KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
IDA+ K + I PLPHM+V+KDLV D+ NFY QYKSI+PWL+
Sbjct: 112 SCGMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 171
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ G ++ QS +RKKLDGLYECILCACCSTSCP YWWN E++LGPA L+ AYRWI
Sbjct: 172 RRSAEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWIS 231
Query: 254 DSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
DSRDE +RL + +D +YRC T+ NCT CPK L+P AI +K +
Sbjct: 232 DSRDEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 281
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDAL KIK E D +L++RRSCREGICGSC MNI G NT+AC+ IDA+ K + I PL
Sbjct: 83 MVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIITPL 142
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAA 109
PHM+V+KDLV D+ NFY QYKSI+ PW + +A+ R F+ S A
Sbjct: 143 PHMFVIKDLVVDLTNFYQQYKSIE-----PW-LKTRRSAEGGREFRQSPA 186
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 316 TAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
A L IDA+ K + I PLPHM+V+KDLV D+ NFY QYKSI+PWL
Sbjct: 123 VACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 169
>gi|307130096|ref|YP_003882112.1| succinate dehydrogenase, FeS subunit [Dickeya dadantii 3937]
gi|306527625|gb|ADM97555.1| succinate dehydrogenase, FeS subunit [Dickeya dadantii 3937]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FYAQY+ I+P+L + +N ++LQS + R+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLNNGKNPPAREHLQSPEQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
+CACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T +RL+ L D FSV+RCH+IM
Sbjct: 151 MCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETKERLDDLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIY-- 57
M+LDALI +K E DPTL FRRSCREG+CGS +N+ G N LACI+ + + SKI
Sbjct: 34 MLLDALILLK-EQDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSTLRNGKSKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|251790495|ref|YP_003005216.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya zeae Ech1591]
gi|247539116|gb|ACT07737.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya zeae Ech1591]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
+ N+K+ I PLP + VV+DLV DM FYAQY+ I+P+L + +N ++LQS + R+K
Sbjct: 84 NGNNKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLNNGKNPPAREHLQSPEQREK 142
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FS
Sbjct: 143 LDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETKSRLDDLNDAFS 202
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
V+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 203 VFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI----DANDKVSKI 56
M+LDALI +K E DPTL FRRSCREG+CGS +N+ G N LACI+ + + N+K+ I
Sbjct: 34 MLLDALILLK-EQDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSTLRNGNNKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ N+K+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 84 NGNNKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|311280401|ref|YP_003942632.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Enterobacter cloacae SCF1]
gi|308749596|gb|ADO49348.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Enterobacter cloacae SCF1]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 112/143 (78%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FYAQY+ I+P+L + +N ++LQS + R+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQSPEQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T +RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDNRLDGLSDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALQRPGQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|427401393|ref|ZP_18892465.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Massilia timonae CCUG 45783]
gi|425719502|gb|EKU82434.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Massilia timonae CCUG 45783]
Length = 236
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 140/232 (60%), Gaps = 50/232 (21%)
Query: 120 AKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN------------KIDANDKVS-------- 159
A+ IYR++PDK D KP MQ+ V+L + K D +D ++
Sbjct: 2 ARTVQLKIYRYDPDK-DSKPYMQDVTVELKDTDKMLLDVLQRIKSDVDDSLALRRSCREG 60
Query: 160 ----------------------------KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+ PLP + VV+DL+ DM NF+ QY S++P+L
Sbjct: 61 VCGSDAMNINGKNGLACTTNLNELTQPIVLRPLPGLPVVRDLIVDMTNFFKQYHSVKPYL 120
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
D + LQS ++R++LDGLYECILCACCSTSCPS+WWN +K++GPA L+QAYR+
Sbjct: 121 INDSIK-PEKERLQSPEEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRF 179
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
I DSRDE T DRL+ L+DP+ ++RCH+IMNCT CPKGLNP +AI +IK+LL
Sbjct: 180 IADSRDEATNDRLDNLEDPYRLFRCHSIMNCTDVCPKGLNPNKAIGKIKELL 231
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LD L +IK+++D +L RRSCREG+CGS AMNI G N LAC + ++ + + PLP
Sbjct: 35 MLLDVLQRIKSDVDDSLALRRSCREGVCGSDAMNINGKNGLACTTNLNELTQPIVLRPLP 94
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ VV+DL+ DM NF+ QY S++ +L
Sbjct: 95 GLPVVRDLIVDMTNFFKQYHSVKPYL 120
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ PLP + VV+DL+ DM NF+ QY S++P+L
Sbjct: 90 LRPLPGLPVVRDLIVDMTNFFKQYHSVKPYL 120
>gi|271499750|ref|YP_003332775.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech586]
gi|270343305|gb|ACZ76070.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Dickeya dadantii Ech586]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
+ N+K+ I PLP + VV+DLV DM FYAQY+ I+P+L + +N + ++LQS + R+K
Sbjct: 84 NGNNKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLNNGKNPPSREHLQSPEQREK 142
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FS
Sbjct: 143 LDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLIDSRDTETKARLDDLNDAFS 202
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
V+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 203 VFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI----DANDKVSKI 56
M+LDALI +K E DPTL FRRSCREG+CGS +N+ G N LACI+ + + N+K+ I
Sbjct: 34 MLLDALILLK-EQDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSTLRNGNNKIV-I 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ N+K+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 84 NGNNKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|424865618|ref|ZP_18289480.1| succinate dehydrogenase iron-sulfur subunit [SAR86 cluster
bacterium SAR86B]
gi|400758577|gb|EJP72781.1| succinate dehydrogenase iron-sulfur subunit [SAR86 cluster
bacterium SAR86B]
Length = 248
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 112/144 (77%), Gaps = 1/144 (0%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
++ PLP + V++DLV DM FYAQY+ I+P+LQ + + LQS +DR KLDGLYEC
Sbjct: 91 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFLQ-NSTTAPEQERLQSPEDRDKLDGLYEC 149
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWN +K+LGPA L+QAYR++ D+RD KT +RL+ L D FSVYRCH I
Sbjct: 150 ILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLADTRDLKTNERLDDLSDRFSVYRCHGI 209
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC CPKGLNP +AI +IKK+L
Sbjct: 210 MNCVSVCPKGLNPNKAIGQIKKML 233
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKI--YP 58
MVLD L+ + E D ++++RRSCREG+CGS MNI G N LACI+ + + K +KI P
Sbjct: 36 MVLD-LLHLLKEKDESISYRRSCREGVCGSDGMNINGKNGLACITPLSSVIKKNKIELRP 94
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LP + V++DLV DM FYAQY+ I+ L
Sbjct: 95 LPGLPVIRDLVVDMTEFYAQYEKIKPFL 122
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 330 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
++ PLP + V++DLV DM FYAQY+ I+P+L S
Sbjct: 91 ELRPLPGLPVIRDLVVDMTEFYAQYEKIKPFLQNS 125
>gi|366158618|ref|ZP_09458480.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
TW09308]
gi|432371455|ref|ZP_19614511.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE11]
gi|430899668|gb|ELC21762.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE11]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N+ ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNLPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|325302724|tpg|DAA34111.1| TPA_exp: succinate dehydrogenase Ip subunit [Amblyomma variegatum]
Length = 235
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 118/196 (60%), Gaps = 50/196 (25%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F +YRW+P+K +KP +Q Y+VDLN
Sbjct: 40 KKFEVYRWDPEKKGDKPRLQTYEVDLNKCGPMVLDALIKIKNEVDPTLTFRRSCREGICG 99
Query: 151 ----------------KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
KID N K +KIYPLPHMYVVKDLVPDM FY YKS+QPWLQ+
Sbjct: 100 SCAMNINGTNTLACICKIDDNTAKSTKIYPLPHMYVVKDLVPDMTLFYEHYKSVQPWLQK 159
Query: 194 DKE-NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
E +G+ Q LQS+ DRKKLDGLYECILCACCSTSCPSYWWN +YL PA LMQ YRW+
Sbjct: 160 KTEVKVGDHQNLQSISDRKKLDGLYECILCACCSTSCPSYWWNSNRYLRPAALMQVYRWV 219
Query: 253 IDSRDEKTADRLNQLK 268
IDSRDE T +RL +L+
Sbjct: 220 IDSRDENTVERLKRLE 235
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 98/162 (60%), Gaps = 32/162 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI KID N K +KIYPL
Sbjct: 71 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGTNTLACICKIDDNTAKSTKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTA----KNIRSFQ---------- 105
PHMYVVKDLVPDM FY YKS+Q PW T +N++S
Sbjct: 131 PHMYVVKDLVPDMTLFYEHYKSVQ-----PWLQKKTEVKVGDHQNLQSISDRKKLDGLYE 185
Query: 106 --LSAAASSAVPAE--------KPAKYKTFAIYRWNPDKPDE 137
L A S++ P+ +PA +YRW D DE
Sbjct: 186 CILCACCSTSCPSYWWNSNRYLRPAAL--MQVYRWVIDSRDE 225
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 232 YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK---DPFSVYRCHTIMNCTRTCPK 288
Y W+ EK G +Q Y ++ D L ++K DP +R R+C +
Sbjct: 45 YRWDPEKK-GDKPRLQTYEVDLNKCGPMVLDALIKIKNEVDPTLTFR--------RSCRE 95
Query: 289 GLNPGRAIAEIKKLLSGLVKKDKPGLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPD 346
G+ G + G +T A + KID N K +KIYPLPHMYVVKDLVPD
Sbjct: 96 GI-------------CGSCAMNINGTNTLACICKIDDNTAKSTKIYPLPHMYVVKDLVPD 142
Query: 347 MNNFYAQYKSIQPWLPR 363
M FY YKS+QPWL +
Sbjct: 143 MTLFYEHYKSVQPWLQK 159
>gi|206576672|ref|YP_002239651.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella pneumoniae
342]
gi|288936493|ref|YP_003440552.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Klebsiella variicola At-22]
gi|290510452|ref|ZP_06549822.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. 1_1_55]
gi|336249315|ref|YP_004593025.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter aerogenes
KCTC 2190]
gi|444352533|ref|YP_007388677.1| Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
[Enterobacter aerogenes EA1509E]
gi|206565730|gb|ACI07506.1| succinate dehydrogenase, iron-sulfur subunit [Klebsiella pneumoniae
342]
gi|288891202|gb|ADC59520.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Klebsiella variicola At-22]
gi|289777168|gb|EFD85166.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella sp. 1_1_55]
gi|334735371|gb|AEG97746.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter aerogenes
KCTC 2190]
gi|443903363|emb|CCG31137.1| Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
[Enterobacter aerogenes EA1509E]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T++RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETSERLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|238785857|ref|ZP_04629825.1| Succinate dehydrogenase iron-sulfur protein [Yersinia bercovieri
ATCC 43970]
gi|238797742|ref|ZP_04641236.1| Succinate dehydrogenase iron-sulfur protein [Yersinia mollaretii
ATCC 43969]
gi|238713227|gb|EEQ05271.1| Succinate dehydrogenase iron-sulfur protein [Yersinia bercovieri
ATCC 43970]
gi|238718383|gb|EEQ10205.1| Succinate dehydrogenase iron-sulfur protein [Yersinia mollaretii
ATCC 43969]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQEY ++
Sbjct: 5 FSIYRYNPDV-DDAPHMQEYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETTARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTQAIGHIKSML 233
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A K +K I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|365848605|ref|ZP_09389079.1| succinate dehydrogenase iron-sulfur subunit [Yokenella regensburgei
ATCC 43003]
gi|364570487|gb|EHM48098.1| succinate dehydrogenase iron-sulfur subunit [Yokenella regensburgei
ATCC 43003]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F++YR+NPD D+ P MQ+Y ++
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLAFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|293397235|ref|ZP_06641508.1| succinate dehydrogenase [Serratia odorifera DSM 4582]
gi|291420255|gb|EFE93511.1| succinate dehydrogenase [Serratia odorifera DSM 4582]
Length = 238
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y+++
Sbjct: 5 FSIYRYNPDV-DDAPHMQDYQLEAEEGRDMMLLDALILLKEKDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----IDANDKVSK------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I +SK I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSSLSKGKGKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D + ++LQS + R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKTPPAREHLQSPEQRAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETAARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + + K I
Sbjct: 34 MLLDALILLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSSLSKGKGKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|238793885|ref|ZP_04637505.1| Succinate dehydrogenase iron-sulfur protein [Yersinia intermedia
ATCC 29909]
gi|238726788|gb|EEQ18322.1| Succinate dehydrogenase iron-sulfur protein [Yersinia intermedia
ATCC 29909]
Length = 238
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 111/143 (77%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FY QY+ I+P+L D +N ++LQS + R+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLNDGKNPPAREHLQSPEQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +TA RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLIDSRDTETAARLDDLDDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI IK +L
Sbjct: 211 NCVSVCPKGLNPTKAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A K +K I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSALQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + + A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPVSALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|378578929|ref|ZP_09827602.1| succinate dehydrogenase, FeS subunit [Pantoea stewartii subsp.
stewartii DC283]
gi|377818442|gb|EHU01525.1| succinate dehydrogenase, FeS subunit [Pantoea stewartii subsp.
stewartii DC283]
Length = 238
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNK-----IDANDKVSK------------------- 160
F+IYR+NPD D+KP MQ+Y ++ + +DA ++ +
Sbjct: 5 FSIYRYNPDV-DDKPRMQDYSLEAEDGRDMMLLDALIRLKEKDPTLAFRRSCREGVCGSD 63
Query: 161 ---------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
I PLP + VV+DLV DM+ FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYTQYEKIKPFLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ EN ++LQ+ +R+ LDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR+II
Sbjct: 124 NGENPPAREHLQTPGEREHLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFII 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDARLDNLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A + I
Sbjct: 34 MLLDALIRLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPVSALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM+ FY QY+ I+ L
Sbjct: 93 PLPGLPVVRDLVVDMSQFYTQYEKIKPFL 121
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
D RD D L +LK DP +R R+C +G+ GL K
Sbjct: 29 DGRDMMLLDALIRLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL N K I PLP + VV+DLV DM+ FY QY+ I+P+L
Sbjct: 71 NGLACITPVSALGNGKQKIVIRPLPGLPVVRDLVVDMSQFYTQYEKIKPFL 121
>gi|429099748|ref|ZP_19161854.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
dublinensis 582]
gi|426286088|emb|CCJ87967.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
dublinensis 582]
Length = 238
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y +D
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLDQEEGRDMMLLDALMLLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGHNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETNERLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 12 EMDPTLTFRRSCREGICGSCAMNIGGVNTLACI---SKIDANDKVSKIYPLPHMYVVKDL 68
E DP+L+FRRSCREG+CGS +N+ G N LACI S + A + I PLP + V++DL
Sbjct: 44 EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDL 103
Query: 69 VPDMNNFYAQYKSIQRHL 86
V DM FYAQY+ I+ +L
Sbjct: 104 VVDMGQFYAQYEKIKPYL 121
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 305 GLVKKDKPGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL + + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|402697757|gb|AFQ91066.1| iron-sulfur succinate dehydrogenase complex subunit B, partial
[Fejervarya limnocharis]
Length = 128
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 108/123 (87%), Gaps = 2/123 (1%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KID N KV+KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QY QS++
Sbjct: 6 KIDTNLSKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESQQGKEQYYQSIE 65
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECI+CACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 66 DRDKLDGLYECIMCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 125
Query: 269 DPF 271
DPF
Sbjct: 126 DPF 128
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 41 LACISKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LAC KID N KV+KIYPLPHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 1 LACTMKIDTNLSKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL 47
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A KID N KV+KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 2 ACTMKIDTNLSKVTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 49
>gi|146310883|ref|YP_001175957.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter sp. 638]
gi|145317759|gb|ABP59906.1| succinate dehydrogenase subunit B [Enterobacter sp. 638]
Length = 238
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FYAQY+ I+P+L + +N ++LQS + R+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQSPEQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLEGLSDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 12 EMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IYPLPHMYVVKDL 68
E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A + + I PLP + VV+DL
Sbjct: 44 EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALQRAGQKIVIRPLPGLPVVRDL 103
Query: 69 VPDMNNFYAQYKSIQRHL 86
V DM FYAQY+ I+ +L
Sbjct: 104 VVDMGQFYAQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 305 GLVKKDKPGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL A + I A + + I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGL--ACITPISALQRAGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|284007861|emb|CBA73768.1| succinate dehydrogenase iron-sulfur protein [Arsenophonus nasoniae]
Length = 238
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 130/230 (56%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKIDA------------------------------ 154
F+IYR+NPD D P MQ+Y +D+ D
Sbjct: 5 FSIYRYNPDV-DNMPRMQDYSLDIAEGRDMMLLDALIQLKEKDPTLAFRRSCREGVCGSD 63
Query: 155 ---------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
N + I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPLSALCRNKRKIVIRPLPGLPVVRDLVVDMAQFYTQYEKIRPYLIN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N +YLQ+ R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNSPAREYLQTPAQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETETRLDNLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA---NDKVSKIY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ + A N + I
Sbjct: 34 MLLDALIQLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPLSALCRNKRKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMAQFYTQYEKIRPYL 121
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 246 MQAYRW-IIDSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y I + RD D L QLK DP +R R+C +G+
Sbjct: 20 MQDYSLDIAEGRDMMLLDALIQLKEKDPTLAFR--------RSCREGVCGS--------- 62
Query: 303 LSGLVKKDKPGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL L + N + I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 63 -DGLNMNGKNGLACITPLSALCRNKRKIVIRPLPGLPVVRDLVVDMAQFYTQYEKIRPYL 121
>gi|251784213|ref|YP_002998517.1| succinate dehydrogenase iron-sulfur protein, subunit of succinate
dehydrogenase [Escherichia coli BL21(DE3)]
gi|253774305|ref|YP_003037136.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160794|ref|YP_003043902.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B
str. REL606]
gi|254287582|ref|YP_003053330.1| succinate dehydrogenase, FeS subunit [Escherichia coli BL21(DE3)]
gi|297519614|ref|ZP_06938000.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli OP50]
gi|242376486|emb|CAQ31190.1| succinate dehydrogenase iron-sulfur protein, subunit of succinate
dehydrogenase [Escherichia coli BL21(DE3)]
gi|253325349|gb|ACT29951.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972695|gb|ACT38366.1| succinate dehydrogenase, FeS subunit [Escherichia coli B str.
REL606]
gi|253976889|gb|ACT42559.1| succinate dehydrogenase, FeS subunit [Escherichia coli BL21(DE3)]
Length = 238
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETGSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|407791175|ref|ZP_11138262.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Gallaecimonas xiamenensis 3-C-1]
gi|407201031|gb|EKE71033.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Gallaecimonas xiamenensis 3-C-1]
Length = 235
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 49/227 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNK-----IDANDKVSK------------------- 160
F++YR+NPD D KP MQ+Y++++ +DA K+ +
Sbjct: 5 FSVYRYNPDV-DTKPRMQDYELEVQEGSDMMVLDALIKLKEQDPTLSLRRSCREGVCGSD 63
Query: 161 ------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE 196
+ PLP + V++DLV DM FY Q++ ++P+L D +
Sbjct: 64 GMNMNGKNGLACITPLSALGNKVVVRPLPGLPVIRDLVVDMGQFYTQWEKVKPFLLNDSK 123
Query: 197 NIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSR 256
++LQS ++R KLDG+YECILCACCSTSCPS+WWN +K++GPA L+ AYRW+ DSR
Sbjct: 124 QPPAREFLQSPEERAKLDGMYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRWLADSR 183
Query: 257 DEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
D T +RL L+DPFSV+RCH IMNC CPKGLNP +AI IK +L
Sbjct: 184 DTATEERLADLEDPFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSML 230
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIK+K E DPTL+ RRSCREG+CGS MN+ G N LACI+ + A + PLP
Sbjct: 34 MVLDALIKLK-EQDPTLSLRRSCREGVCGSDGMNMNGKNGLACITPLSALGNKVVVRPLP 92
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ V++DLV DM FY Q++ ++ L
Sbjct: 93 GLPVIRDLVVDMGQFYTQWEKVKPFL 118
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 305 GLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G+ K GL A + + A + PLP + V++DLV DM FY Q++ ++P+L
Sbjct: 64 GMNMNGKNGL--ACITPLSALGNKVVVRPLPGLPVIRDLVVDMGQFYTQWEKVKPFL 118
>gi|262281277|ref|ZP_06059059.1| succinate dehydrogenase/fumarate reductase [Acinetobacter
calcoaceticus RUH2202]
gi|299768986|ref|YP_003731012.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter
oleivorans DR1]
gi|262257508|gb|EEY76244.1| succinate dehydrogenase/fumarate reductase [Acinetobacter
calcoaceticus RUH2202]
gi|298699074|gb|ADI89639.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter
oleivorans DR1]
Length = 236
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 138/228 (60%), Gaps = 49/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA------------------------ 154
+TF IYR++PDK D+ P MQ +K++L +K +DA
Sbjct: 6 RTFEIYRYDPDK-DKAPYMQTFKLELTDKHRMLLDALLALKVQDETLTFRRSCREGICGS 64
Query: 155 -----------------NDKVSKIY--PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
ND KI PLP + VVKDLV DMN FY QY IQP+L ++
Sbjct: 65 DGVNINGKNGLACLENLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINNQ 124
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+ LQS ++R+ L+GLYECILCACCSTSCPS+WWN +K+LGP+ L+ AYR+IIDS
Sbjct: 125 P-APPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RD TADRL++L DPFS++RC IMNC CPKGLNP +AI I+ +L
Sbjct: 184 RDTATADRLSRLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNML 231
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDAL+ +K + D TLTFRRSCREGICGS +NI G N LAC+ ++ + I PLP
Sbjct: 36 MLLDALLALKVQ-DETLTFRRSCREGICGSDGVNINGKNGLACLENLNDLPEKIVIRPLP 94
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ VVKDLV DMN FY QY IQ L
Sbjct: 95 GLPVVKDLVVDMNQFYDQYDKIQPFL 120
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VVKDLV DMN FY QY IQP+L
Sbjct: 90 IRPLPGLPVVKDLVVDMNQFYDQYDKIQPFL 120
>gi|238757974|ref|ZP_04619155.1| Succinate dehydrogenase iron-sulfur protein [Yersinia aldovae ATCC
35236]
gi|238703728|gb|EEP96264.1| Succinate dehydrogenase iron-sulfur protein [Yersinia aldovae ATCC
35236]
Length = 238
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y +D
Sbjct: 5 FSIYRYNPDV-DNAPYMQDYTLDAEEGRDMMLLDALILLKETDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETPARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A K +K I
Sbjct: 34 MLLDALILLK-ETDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 305 GLVKKDKPGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL A + I A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGL--ACITPISALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|322833844|ref|YP_004213871.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rahnella sp. Y9602]
gi|384259024|ref|YP_005402958.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rahnella aquatilis HX2]
gi|321169045|gb|ADW74744.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rahnella sp. Y9602]
gi|380755000|gb|AFE59391.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rahnella aquatilis HX2]
Length = 238
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FY QY+ I+P+L D +N ++LQ DDR+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYKQYEKIKPYLLNDGKNPPAREHLQMPDDREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLIDSRDTETQSRLDDLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI IK +L
Sbjct: 211 NCVSVCPKGLNPTKAIGHIKSML 233
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI +K E DPTL FRRSCREG+CGS +N+ G N LACI+ + SK I
Sbjct: 34 MLLDALILLK-EQDPTLAFRRSCREGVCGSDGVNMNGKNGLACITPVSTLRNGSKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYKQYEKIKPYL 121
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYKQYEKIKPYL 121
>gi|383191008|ref|YP_005201136.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371589266|gb|AEX52996.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 238
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FY QY+ I+P+L D +N ++LQ DDR+KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYKQYEKIKPYLLNDGKNPPAREHLQMPDDREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLIDSRDTETQSRLDDLDDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI IK +L
Sbjct: 211 NCVSVCPKGLNPTKAIGHIKSML 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + SK I
Sbjct: 34 MLLDALILLK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPVSTLRNGSKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYKQYEKIKPYL 121
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYKQYEKIKPYL 121
>gi|332306148|ref|YP_004433999.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Glaciecola sp. 4H-3-7+YE-5]
gi|410643439|ref|ZP_11353935.1| succinate dehydrogenase iron-sulfur subunit [Glaciecola
chathamensis S18K6]
gi|410645079|ref|ZP_11355547.1| succinate dehydrogenase iron-sulfur subunit [Glaciecola agarilytica
NO2]
gi|332173477|gb|AEE22731.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Glaciecola sp. 4H-3-7+YE-5]
gi|410135312|dbj|GAC03946.1| succinate dehydrogenase iron-sulfur subunit [Glaciecola agarilytica
NO2]
gi|410136849|dbj|GAC12122.1| succinate dehydrogenase iron-sulfur subunit [Glaciecola
chathamensis S18K6]
Length = 236
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 130/229 (56%), Gaps = 50/229 (21%)
Query: 124 TFAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AN 155
TF++YR+NPD D P MQ+YK+++ D +
Sbjct: 4 TFSVYRYNPDV-DNAPRMQDYKLEVEEGQDMMVLDALIALKEQDPTLSFRRSCREGVCGS 62
Query: 156 DKVSK---------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD 194
D V+ I PLP + VV+DLV DM FY QY+ I+P+L D
Sbjct: 63 DGVNMNGKNGLACITPLSALGNKKIVIRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLIND 122
Query: 195 KENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIID 254
++LQS ++R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++ D
Sbjct: 123 NNQPPAREFLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLAD 182
Query: 255 SRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
SRD T RL L D FSV+RCH IMNC CPKGLNP +AI IK +L
Sbjct: 183 SRDTATEQRLGDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSML 231
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A +K I PL
Sbjct: 34 MVLDALIALK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPLSALGNKKIVIRPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
P + VV+DLV DM FY QY+ I+ L
Sbjct: 93 PGLPVVRDLVVDMTQFYTQYEKIKPFL 119
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Query: 246 MQAYRWIID-SRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y+ ++ +D D L LK DP +R R+C +G+
Sbjct: 20 MQDYKLEVEEGQDMMVLDALIALKEQDPTLSFR--------RSCREGVCGS--------- 62
Query: 303 LSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G+ K GL N K+ I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 63 -DGVNMNGKNGLACITPLSALGNKKIV-IRPLPGLPVVRDLVVDMTQFYTQYEKIKPFL 119
>gi|242049094|ref|XP_002462291.1| hypothetical protein SORBIDRAFT_02g023310 [Sorghum bicolor]
gi|241925668|gb|EER98812.1| hypothetical protein SORBIDRAFT_02g023310 [Sorghum bicolor]
Length = 313
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 132/239 (55%), Gaps = 59/239 (24%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN-------------------------------- 150
K F +YRWNPD P +P +Q Y VDL +
Sbjct: 69 KEFQVYRWNPDSPAGRPFLQSYLVDLASCGPMVLDVLQKIKAEQDSTLAFRRSCREGICG 128
Query: 151 ----KIDANDKV-------------SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
ID + V S + PLPHMYVVKDLV D+ NFY QY+S++PWL+
Sbjct: 129 SCSMSIDGVNTVACLKPVDADTSRPSMVTPLPHMYVVKDLVVDLTNFYQQYRSVEPWLKT 188
Query: 194 DKE----NIGNA-----QYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAV 244
+ + G A ++LQS RKKLDGLYECILCACCST+CPSYWWN E +LGPA
Sbjct: 189 KRRASSASEGEATTTRREHLQSPAQRKKLDGLYECILCACCSTACPSYWWNSEAFLGPAA 248
Query: 245 LMQAYRWIIDSRDEKTADRLNQLKDPF-SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
L+ AYRW+ DSRD+ +R+ L + + +YRC I +CT TCPK L+P AI+ +K L
Sbjct: 249 LLHAYRWVSDSRDDYGRERIQSLSEGWDKMYRCRMIKSCTATCPKSLDPAAAISAMKAL 307
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L KIK E D TL FRRSCREGICGSC+M+I GVNT+AC+ +DA+ + S + PL
Sbjct: 100 MVLDVLQKIKAEQDSTLAFRRSCREGICGSCSMSIDGVNTVACLKPVDADTSRPSMVTPL 159
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVVKDLV D+ NFY QY+S++ PW
Sbjct: 160 PHMYVVKDLVVDLTNFYQQYRSVE-----PW 185
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 313 GLDTAA-LHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A L +DA+ + S + PLPHMYVVKDLV D+ NFY QY+S++PWL
Sbjct: 136 GVNTVACLKPVDADTSRPSMVTPLPHMYVVKDLVVDLTNFYQQYRSVEPWL 186
>gi|300918383|ref|ZP_07134983.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
115-1]
gi|432532877|ref|ZP_19769872.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE234]
gi|300414446|gb|EFJ97756.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
115-1]
gi|431063226|gb|ELD72476.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE234]
Length = 238
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+++N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NEQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|397167537|ref|ZP_10490979.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter
radicincitans DSM 16656]
gi|396090895|gb|EJI88463.1| succinate dehydrogenase iron-sulfur subunit [Enterobacter
radicincitans DSM 16656]
Length = 238
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD---------LNNKIDANDKVSK--------------- 160
F+IYR+NPD D+ P MQ+Y ++ L+ I +K S
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDSTLSFRRSCREGVCGSD 63
Query: 161 ---------------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALGNGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ+ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQAPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E D TL+FRRSCREG+CGS +N+ G N LACI+ I A + I
Sbjct: 34 MLLDALIQLK-EKDSTLSFRRSCREGVCGSDGLNMNGKNGLACITPISALGNGKQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPG 313
+ RD D L QLK+ S ++ R+C +G+ GL K G
Sbjct: 29 EGRDMMLLDALIQLKEKDST------LSFRRSCREGVCGS----------DGLNMNGKNG 72
Query: 314 LDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
L N K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 73 LACITPISALGNGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|407696509|ref|YP_006821297.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Alcanivorax dieselolei B5]
gi|407253847|gb|AFT70954.1| Succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Alcanivorax dieselolei B5]
Length = 238
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 131/232 (56%), Gaps = 56/232 (24%)
Query: 126 AIYRWNPDKPDEKPTMQEYKVD-------------------------------------- 147
+IYR+NPD D +PTM+EY VD
Sbjct: 4 SIYRYNPDT-DREPTMKEYDVDTQGKDLMVLDVLNLVKEMDPSLGFRRSCREGVCGSDGM 62
Query: 148 -LNNK---------------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
+N K + K + PLP + VV+DLV DM FY QY+ +QP+L
Sbjct: 63 NINGKNGLACITSLSSVAPGVKEGKKALVLRPLPGLPVVRDLVVDMTMFYNQYEKVQPYL 122
Query: 192 QRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRW 251
Q + + LQS +DR KLDGLYECILCACCSTSCPS+WWN +K+LGPA L+Q YR+
Sbjct: 123 Q-NSTPAPAIERLQSPEDRAKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQGYRF 181
Query: 252 IIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
+ DSRD T +RL++L DPFS++RCH IMNC CPKGLNP RAI I+ +L
Sbjct: 182 LADSRDTATEERLSRLDDPFSLFRCHGIMNCVSVCPKGLNPTRAIGHIRSML 233
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 28/150 (18%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-------NDKV 53
MVLD L +K EMDP+L FRRSCREG+CGS MNI G N LACI+ + + K
Sbjct: 31 MVLDVLNLVK-EMDPSLGFRRSCREGVCGSDGMNINGKNGLACITSLSSVAPGVKEGKKA 89
Query: 54 SKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL--GGPWKILGTLTAKNIRS-------F 104
+ PLP + VV+DLV DM FY QY+ +Q +L P + L + R+
Sbjct: 90 LVLRPLPGLPVVRDLVVDMTMFYNQYEKVQPYLQNSTPAPAIERLQSPEDRAKLDGLYEC 149
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDK 134
L A S++ P+ + WNPDK
Sbjct: 150 ILCACCSTSCPS-----------FWWNPDK 168
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 322 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
+ K + PLP + VV+DLV DM FY QY+ +QP+L S
Sbjct: 83 VKEGKKALVLRPLPGLPVVRDLVVDMTMFYNQYEKVQPYLQNS 125
>gi|82775992|ref|YP_402339.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae
Sd197]
gi|293414001|ref|ZP_06656650.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B185]
gi|331651722|ref|ZP_08352741.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M718]
gi|422834767|ref|ZP_16882827.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli E101]
gi|425287306|ref|ZP_18678230.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3006]
gi|432453475|ref|ZP_19695713.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE193]
gi|432530056|ref|ZP_19767097.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE233]
gi|433032215|ref|ZP_20219990.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE112]
gi|81240140|gb|ABB60850.1| succinate dehydrogenase, iron sulfur protein [Shigella dysenteriae
Sd197]
gi|291434059|gb|EFF07032.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B185]
gi|331050000|gb|EGI22058.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M718]
gi|371613951|gb|EHO02439.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli E101]
gi|408218070|gb|EKI42303.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3006]
gi|430974108|gb|ELC91046.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE193]
gi|431056799|gb|ELD66292.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE233]
gi|431558822|gb|ELI32406.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE112]
Length = 238
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+++N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NEQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 26/122 (21%)
Query: 246 MQAYRWIID-SRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y D RD D L QLK DP +R R+C +G+
Sbjct: 20 MQDYTLEADEGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS--------- 62
Query: 303 LSGLVKKDKPGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQP 359
GL K GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P
Sbjct: 63 -DGLNMNGKNGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKP 119
Query: 360 WL 361
+L
Sbjct: 120 YL 121
>gi|387889961|ref|YP_006320259.1| succinate dehydrogenase [Escherichia blattae DSM 4481]
gi|414592372|ref|ZP_11442023.1| succinate dehydrogenase iron-sulfur protein subunit [Escherichia
blattae NBRC 105725]
gi|386924794|gb|AFJ47748.1| succinate dehydrogenase [Escherichia blattae DSM 4481]
gi|403196689|dbj|GAB79675.1| succinate dehydrogenase iron-sulfur protein subunit [Escherichia
blattae NBRC 105725]
Length = 238
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F++YR+NPD D+ P MQ+Y ++
Sbjct: 5 FSVYRYNPDV-DDAPRMQDYTLEAQEGRDMMLLDALIQLKEKDPTLAFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A SK I PLP + V++DL+ DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALSDGSKKIVIRPLPGLPVIRDLIVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ A+R++I
Sbjct: 124 NGTNPPAREFLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAWRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +TA RL+ L D FSV+RCH IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETASRLDGLSDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G N LACI+ I A SK I
Sbjct: 34 MLLDALIQLK-EKDPTLAFRRSCREGVCGSDGLNMNGKNGLACITPISALSDGSKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DL+ DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLIVDMGQFYAQYEKIKPYL 121
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLAFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A SK I PLP + V++DL+ DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALSDGSKKIVIRPLPGLPVIRDLIVDMGQFYAQYEKIKPYL 121
>gi|432731394|ref|ZP_19966232.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE45]
gi|432758473|ref|ZP_19992976.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE46]
gi|431278302|gb|ELF69296.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE45]
gi|431311437|gb|ELF99600.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE46]
Length = 238
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPTREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|123443159|ref|YP_001007133.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|332160917|ref|YP_004297494.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309304|ref|YP_006005360.1| succinate dehydrogenase iron-sulfur protein [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418243294|ref|ZP_12869779.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|420257713|ref|ZP_14760465.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|433550379|ref|ZP_20506423.1| Succinate dehydrogenase iron-sulfur protein [Yersinia
enterocolitica IP 10393]
gi|122090120|emb|CAL12983.1| succinate dehydrogenase iron-sulfur protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|318604822|emb|CBY26320.1| succinate dehydrogenase iron-sulfur protein [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665147|gb|ADZ41791.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|351777227|gb|EHB19459.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|404514790|gb|EKA28573.1| succinate dehydrogenase iron-sulfur subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|431789514|emb|CCO69463.1| Succinate dehydrogenase iron-sulfur protein [Yersinia
enterocolitica IP 10393]
Length = 238
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DNAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETTARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A K +K I
Sbjct: 34 MLLDALIQLK-EKDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSALQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + + A K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPVSALQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|424742527|ref|ZP_18170849.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Acinetobacter baumannii WC-141]
gi|422944143|gb|EKU39148.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Acinetobacter baumannii WC-141]
Length = 236
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 137/228 (60%), Gaps = 49/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA------------------------ 154
+TF IYR++PDK D+ P MQ +K++L +K +DA
Sbjct: 6 RTFEIYRYDPDK-DKAPYMQTFKLELTDKHRMLLDALLALKVQDETLTFRRSCREGICGS 64
Query: 155 -----------------NDKVSKIY--PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
ND KI PLP + VVKDLV DMN FY QY IQP+L ++
Sbjct: 65 DGVNINGKNGLACLENLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINNQ 124
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+ LQS ++R+ L+GLYECILCACCSTSCPS+WWN +K+LGP+ L+ AYR+IIDS
Sbjct: 125 P-APPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RD TADRL +L DPFS++RC IMNC CPKGLNP +AI I+ +L
Sbjct: 184 RDTATADRLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNML 231
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDAL+ +K + D TLTFRRSCREGICGS +NI G N LAC+ ++ + I PLP
Sbjct: 36 MLLDALLALKVQ-DETLTFRRSCREGICGSDGVNINGKNGLACLENLNDLPEKIVIRPLP 94
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ VVKDLV DMN FY QY IQ L
Sbjct: 95 GLPVVKDLVVDMNQFYDQYDKIQPFL 120
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VVKDLV DMN FY QY IQP+L
Sbjct: 90 IRPLPGLPVVKDLVVDMNQFYDQYDKIQPFL 120
>gi|238790486|ref|ZP_04634255.1| Succinate dehydrogenase iron-sulfur protein [Yersinia frederiksenii
ATCC 33641]
gi|238721430|gb|EEQ13101.1| Succinate dehydrogenase iron-sulfur protein [Yersinia frederiksenii
ATCC 33641]
Length = 238
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 133/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DNAPHMQDYTLEAEEGRDMMLLDALIQLKETDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISVLQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETTARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I K +K I
Sbjct: 34 MLLDALIQLK-ETDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISVLQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKETDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPISVLQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|260549004|ref|ZP_05823226.1| succinate dehydrogenase/fumarate reductase [Acinetobacter sp.
RUH2624]
gi|424054517|ref|ZP_17792041.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter
nosocomialis Ab22222]
gi|445434455|ref|ZP_21440068.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Acinetobacter baumannii OIFC021]
gi|260408172|gb|EEX01643.1| succinate dehydrogenase/fumarate reductase [Acinetobacter sp.
RUH2624]
gi|407439266|gb|EKF45791.1| succinate dehydrogenase iron-sulfur subunit [Acinetobacter
nosocomialis Ab22222]
gi|444756437|gb|ELW80982.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Acinetobacter baumannii OIFC021]
Length = 236
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/228 (46%), Positives = 137/228 (60%), Gaps = 49/228 (21%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNNK----IDA------------------------ 154
+TF IYR++PDK D+ P MQ +K++L +K +DA
Sbjct: 6 RTFEIYRYDPDK-DKAPYMQTFKLELTDKHRMLLDALLALKVQDETLTFRRSCREGICGS 64
Query: 155 -----------------NDKVSKIY--PLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
ND KI PLP + VVKDLV DMN FY QY IQP+L ++
Sbjct: 65 DGVNINGKNGLACLQNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFLINNQ 124
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+ LQS ++R+ L+GLYECILCACCSTSCPS+WWN +K+LGP+ L+ AYR+IIDS
Sbjct: 125 P-APPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFIIDS 183
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RD TADRL +L DPFS++RC IMNC CPKGLNP +AI I+ +L
Sbjct: 184 RDTATADRLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNML 231
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDAL+ +K + D TLTFRRSCREGICGS +NI G N LAC+ ++ + I PLP
Sbjct: 36 MLLDALLALKVQ-DETLTFRRSCREGICGSDGVNINGKNGLACLQNLNDLPEKIVIRPLP 94
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ VVKDLV DMN FY QY IQ L
Sbjct: 95 GLPVVKDLVVDMNQFYDQYDKIQPFL 120
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VVKDLV DMN FY QY IQP+L
Sbjct: 90 IRPLPGLPVVKDLVVDMNQFYDQYDKIQPFL 120
>gi|238752115|ref|ZP_04613598.1| Succinate dehydrogenase iron-sulfur protein [Yersinia rohdei ATCC
43380]
gi|238709692|gb|EEQ01927.1| Succinate dehydrogenase iron-sulfur protein [Yersinia rohdei ATCC
43380]
Length = 238
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DNAPYMQDYTLEAEEGRDMMLLDALIQLKETDPTLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISVLQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
D +N ++LQS + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 DGKNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T+ RL+ L D FSV+RCH+IMNC CPKGLNP +AI IK +L
Sbjct: 184 DSRDTETSARLDDLDDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I K +K I
Sbjct: 34 MLLDALIQLK-ETDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPISVLQKGNKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKETDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I K +K I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 71 NGL--ACITPISVLQKGNKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPYL 121
>gi|410636494|ref|ZP_11347088.1| succinate dehydrogenase iron-sulfur subunit [Glaciecola lipolytica
E3]
gi|410144106|dbj|GAC14293.1| succinate dehydrogenase iron-sulfur subunit [Glaciecola lipolytica
E3]
Length = 236
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 133/228 (58%), Gaps = 50/228 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F+IYR+NPD D P MQ+Y +++ D +D
Sbjct: 5 FSIYRYNPDV-DNAPRMQDYALEVEEGQDMMVLDALIALKEQDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK---------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
V+ + PLP + VV+DLV DM+ FY QY+ I+P+L D
Sbjct: 64 GVNMNGKNGLACITPLSALGKGKIVVRPLPGLPVVRDLVVDMSQFYTQYEKIKPFLINDD 123
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
++ ++LQS ++R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++IDS
Sbjct: 124 KHPPAREHLQSPEERAKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLHAYRFLIDS 183
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RD T RLN L D FSV+RCH IMNC CPKGLNP +AI +IK +L
Sbjct: 184 RDTATDARLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGQIKSML 231
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 79/148 (53%), Gaps = 29/148 (19%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY-PL 59
MVLDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A K + PL
Sbjct: 34 MVLDALIALK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPLSALGKGKIVVRPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI-------------QRHLGGPWKILGTLTAKNIRSFQL 106
P + VV+DLV DM+ FY QY+ I + HL P + + L
Sbjct: 93 PGLPVVRDLVVDMSQFYTQYEKIKPFLINDDKHPPAREHLQSPEE---RAKLDGLYECIL 149
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDK 134
A S++ P+ + WNPDK
Sbjct: 150 CACCSTSCPS-----------FWWNPDK 166
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ PLP + VV+DLV DM+ FY QY+ I+P+L
Sbjct: 89 VRPLPGLPVVRDLVVDMSQFYTQYEKIKPFL 119
>gi|423119307|ref|ZP_17106991.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5246]
gi|376398894|gb|EHT11516.1| succinate dehydrogenase iron-sulfur subunit [Klebsiella oxytoca
10-5246]
Length = 238
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 135/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALMQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQKPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDAL+++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALMQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALMQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|283784480|ref|YP_003364345.1| succinate dehydrogenase iron-sulfur protein [Citrobacter rodentium
ICC168]
gi|282947934|emb|CBG87498.1| succinate dehydrogenase iron-sulfur protein [Citrobacter rodentium
ICC168]
Length = 238
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 137/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A +++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQLGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ+ + R+KLDGLYECILCACCSTSCPS+WW+ +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQTPEQREKLDGLYECILCACCSTSCPSFWWSPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL + D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A +++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQLGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A +++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQLGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|253687629|ref|YP_003016819.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754207|gb|ACT12283.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 238
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 135/231 (58%), Gaps = 54/231 (23%)
Query: 125 FAIYRWNPDKPDEKPTMQEYK--------------------------------------- 145
F+IYR+NPD D+ P MQ+Y+
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVCGSD 63
Query: 146 -VDLNNKID------------ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQ 192
V++N K N K+ I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPVSALRRGNSKIV-IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLL 122
Query: 193 RDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ +N ++LQS D R KLDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++
Sbjct: 123 NNGKNPPAREHLQSPDQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFL 182
Query: 253 IDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
IDSRD +T RL++L D FSV+RCH IMNC CPKGLNP +AI IK +L
Sbjct: 183 IDSRDTETKPRLDELDDAFSVFRCHGIMNCVNVCPKGLNPTKAIGHIKSML 233
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 12 EMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKIYPLPHMYVVKD 67
E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A N K+ I PLP + VV+D
Sbjct: 44 EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPVSALRRGNSKIV-IRPLPGLPVVRD 102
Query: 68 LVPDMNNFYAQYKSIQRHL 86
LV DM FYAQY+ I+ +L
Sbjct: 103 LVVDMGQFYAQYEKIKPYL 121
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|260597123|ref|YP_003209694.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter turicensis
z3032]
gi|429082936|ref|ZP_19145990.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter condimenti
1330]
gi|429089971|ref|ZP_19152703.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
universalis NCTC 9529]
gi|429103574|ref|ZP_19165548.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter turicensis
564]
gi|260216300|emb|CBA29269.1| Succinate dehydrogenase iron-sulfur subunit [Cronobacter turicensis
z3032]
gi|426290223|emb|CCJ91661.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter turicensis
564]
gi|426509774|emb|CCK17815.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
universalis NCTC 9529]
gi|426548246|emb|CCJ72031.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter condimenti
1330]
Length = 238
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEQEEGRDMMLLDALMLLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSNLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGHNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T +RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETNERLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 12 EMDPTLTFRRSCREGICGSCAMNIGGVNTLACI---SKIDANDKVSKIYPLPHMYVVKDL 68
E DP+L+FRRSCREG+CGS +N+ G N LACI S + A + I PLP + V++DL
Sbjct: 44 EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPVSNLGAGKQKIVIRPLPGLPVIRDL 103
Query: 69 VPDMNNFYAQYKSIQRHL 86
V DM FYAQY+ I+ +L
Sbjct: 104 VVDMGQFYAQYEKIKPYL 121
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 305 GLVKKDKPGLD-TAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL + + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSNLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|354598508|ref|ZP_09016525.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brenneria sp. EniD312]
gi|353676443|gb|EHD22476.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Brenneria sp. EniD312]
Length = 238
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 132/230 (57%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F+IYR+NPD D+ P MQ+Y+++ D +D
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYRLEAEEGRDMMLLDALILLKEQDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK-----------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
V+ + PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 64 GVNMNGKNGLACITPISALRRGNHKIVVRPLPGLPVVRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ N ++LQS + R KLDGLYECI+CACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGRNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETQPRLENLDDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 6/90 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA----NDKVSKI 56
M+LDALI +K E DPTL+FRRSCREG+CGS +N+ G N LACI+ I A N K+ +
Sbjct: 34 MLLDALILLK-EQDPTLSFRRSCREGVCGSDGVNMNGKNGLACITPISALRRGNHKIV-V 91
Query: 57 YPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FYAQY+ I+ +L
Sbjct: 92 RPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ PLP + VV+DLV DM FYAQY+ I+P+L
Sbjct: 91 VRPLPGLPVVRDLVVDMGQFYAQYEKIKPYL 121
>gi|374705661|ref|ZP_09712531.1| succinate dehydrogenase iron-sulfur subunit [Pseudomonas sp. S9]
Length = 234
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + V++DLV DM+ FY QY+ +QP+LQ D + LQS ++R+KLDGLYECI
Sbjct: 88 IRPLPGLPVIRDLVVDMSIFYKQYEKVQPFLQNDTPTPA-IERLQSPEEREKLDGLYECI 146
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K+LGPA L+QAYR++ DSRD KT +RL+ L DPFSV+RC +IM
Sbjct: 147 LCACCSTSCPSFWWNPDKFLGPAALLQAYRFLADSRDTKTVERLSALDDPFSVFRCRSIM 206
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI I+ +L
Sbjct: 207 NCVSVCPKGLNPTKAIGHIRGML 229
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 77/145 (53%), Gaps = 23/145 (15%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK--IYP 58
MVLD L +K E D ++RRSCREG+CGS MNI G N LACI+ + A K +K I P
Sbjct: 32 MVLDVLALVK-EQDEGFSYRRSCREGVCGSDGMNINGKNGLACITPLSAVVKNNKLVIRP 90
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGG--PWKILGTLTAKNIR-------SFQLSAA 109
LP + V++DLV DM+ FY QY+ +Q L P + L + R L A
Sbjct: 91 LPGLPVIRDLVVDMSIFYKQYEKVQPFLQNDTPTPAIERLQSPEEREKLDGLYECILCAC 150
Query: 110 ASSAVPAEKPAKYKTFAIYRWNPDK 134
S++ P+ + WNPDK
Sbjct: 151 CSTSCPS-----------FWWNPDK 164
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 319 LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
L + N+K+ I PLP + V++DLV DM+ FY QY+ +QP+L
Sbjct: 77 LSAVVKNNKLV-IRPLPGLPVIRDLVVDMSIFYKQYEKVQPFL 118
>gi|115478849|ref|NP_001063018.1| Os09g0370300 [Oryza sativa Japonica Group]
gi|49389107|dbj|BAD26386.1| putative succinate dehydrogenase [Oryza sativa Japonica Group]
gi|113631251|dbj|BAF24932.1| Os09g0370300 [Oryza sativa Japonica Group]
Length = 311
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 128/231 (55%), Gaps = 51/231 (22%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN----------KIDA------------------ 154
K F +YRW+PD P +P +Q Y VDL KI A
Sbjct: 75 KEFRVYRWSPDAPSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICG 134
Query: 155 ---------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+ + PLPHMYVV+DLV D+ +FY QYKS++PWL+R
Sbjct: 135 SCSMCIDGVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKR 194
Query: 194 DKENIGNAQ-YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ + QS ++RK+LDGLYECILCACCS +CPSYWWN E +LGPA L+ AYRW+
Sbjct: 195 KTKTKTETTEHAQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWV 254
Query: 253 IDSRDEKTADRLNQLKDPF-SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
DSRDE A+R+ L + + +YRC I +CT TCPK L+P AI+ +K L
Sbjct: 255 SDSRDEYAAERVQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMKTL 305
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L KIK E D TL FRRSCREGICGSC+M I GVNT+AC+ +D + + + PL
Sbjct: 106 MVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCIDGVNTVACLRPVDTDTSSATTVTPL 165
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLV D+ +FY QYKS++ PW
Sbjct: 166 PHMYVVRDLVVDLTSFYQQYKSVE-----PW 191
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 313 GLDTAA-LHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +D + + + PLPHMYVV+DLV D+ +FY QYKS++PWL R
Sbjct: 142 GVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKR 194
>gi|221134280|ref|ZP_03560585.1| succinate dehydrogenase catalytic subunit [Glaciecola sp. HTCC2999]
Length = 236
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 133/228 (58%), Gaps = 50/228 (21%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID----------------------------AND 156
F+IYR+NPD D+ P MQEY +++ D +D
Sbjct: 5 FSIYRYNPDI-DDAPRMQEYSLEVEEGQDMMVLDALIALKETDPTLSFRRSCREGVCGSD 63
Query: 157 KVSK---------------------IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDK 195
++ + PLP + VV+DLV DM FY QY+ I+P+L D
Sbjct: 64 GMNMNGKNGLACITPLSALGKGKIVVRPLPGLPVVRDLVVDMTQFYTQYEKIKPFLINDD 123
Query: 196 ENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDS 255
+ + +++Q ++R KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++IDS
Sbjct: 124 KQPPSREHIQMPEERAKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDS 183
Query: 256 RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
RD T +RLN L D FSV+RCH IMNC CPKGLNP +AI +IK +L
Sbjct: 184 RDTATDERLNDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGQIKSML 231
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY-PL 59
MVLDALI +K E DPTL+FRRSCREG+CGS MN+ G N LACI+ + A K + PL
Sbjct: 34 MVLDALIALK-ETDPTLSFRRSCREGVCGSDGMNMNGKNGLACITPLSALGKGKIVVRPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
P + VV+DLV DM FY QY+ I+ L
Sbjct: 93 PGLPVVRDLVVDMTQFYTQYEKIKPFL 119
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
+ PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 89 VRPLPGLPVVRDLVVDMTQFYTQYEKIKPFL 119
>gi|15800428|ref|NP_286440.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. EDL933]
gi|15830003|ref|NP_308776.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. Sakai]
gi|24112000|ref|NP_706510.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a
str. 301]
gi|26246692|ref|NP_752732.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
CFT073]
gi|30062113|ref|NP_836284.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a
str. 2457T]
gi|74311248|ref|YP_309667.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei Ss046]
gi|82543151|ref|YP_407098.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii Sb227]
gi|91209758|ref|YP_539744.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
UTI89]
gi|110640933|ref|YP_668661.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 536]
gi|110804648|ref|YP_688168.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 5
str. 8401]
gi|117622918|ref|YP_851831.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli APEC
O1]
gi|157156213|ref|YP_001461884.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
E24377A]
gi|157160204|ref|YP_001457522.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli HS]
gi|168750655|ref|ZP_02775677.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4113]
gi|168757177|ref|ZP_02782184.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4401]
gi|168764005|ref|ZP_02789012.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4501]
gi|168767164|ref|ZP_02792171.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4486]
gi|168777540|ref|ZP_02802547.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4196]
gi|168779207|ref|ZP_02804214.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4076]
gi|168786877|ref|ZP_02811884.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC869]
gi|168801367|ref|ZP_02826374.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC508]
gi|170020931|ref|YP_001725885.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli ATCC
8739]
gi|170681087|ref|YP_001742825.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
SMS-3-5]
gi|170769118|ref|ZP_02903571.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia albertii
TW07627]
gi|187732898|ref|YP_001879379.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii CDC
3083-94]
gi|188493229|ref|ZP_03000499.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
53638]
gi|191167218|ref|ZP_03029037.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli B7A]
gi|191174070|ref|ZP_03035586.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli F11]
gi|193065540|ref|ZP_03046608.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E22]
gi|193070666|ref|ZP_03051603.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
E110019]
gi|194429062|ref|ZP_03061593.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
B171]
gi|194433987|ref|ZP_03066258.1| succinate dehydrogenase, iron-sulfur subunit [Shigella dysenteriae
1012]
gi|194439250|ref|ZP_03071330.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
101-1]
gi|195939065|ref|ZP_03084447.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208807205|ref|ZP_03249542.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4206]
gi|208814896|ref|ZP_03256075.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4045]
gi|208823156|ref|ZP_03263474.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4042]
gi|209400050|ref|YP_002269347.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4115]
gi|209917975|ref|YP_002292059.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli SE11]
gi|215485743|ref|YP_002328174.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217324173|ref|ZP_03440257.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. TW14588]
gi|218549711|ref|YP_002383502.1| succinate dehydrogenase iron-sulfur subunit [Escherichia fergusonii
ATCC 35469]
gi|218553251|ref|YP_002386164.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli IAI1]
gi|218557640|ref|YP_002390553.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli S88]
gi|218688518|ref|YP_002396730.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli ED1a]
gi|218694148|ref|YP_002401815.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
55989]
gi|218699079|ref|YP_002406708.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
IAI39]
gi|222155456|ref|YP_002555595.1| Succinate dehydrogenase iron-sulfur subunit [Escherichia coli LF82]
gi|227884309|ref|ZP_04002114.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
83972]
gi|237707314|ref|ZP_04537795.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
3_2_53FAA]
gi|254791870|ref|YP_003076707.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. TW14359]
gi|260842931|ref|YP_003220709.1| succinate dehydrogenase, FeS subunit [Escherichia coli O103:H2 str.
12009]
gi|260866855|ref|YP_003233257.1| succinate dehydrogenase, FeS subunit [Escherichia coli O111:H- str.
11128]
gi|261224425|ref|ZP_05938706.1| succinate dehydrogenase, FeS subunit [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254584|ref|ZP_05947117.1| succinate dehydrogenase, FeS subunit [Escherichia coli O157:H7 str.
FRIK966]
gi|291281656|ref|YP_003498474.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O55:H7 str. CB9615]
gi|293409098|ref|ZP_06652674.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B354]
gi|293432993|ref|ZP_06661421.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli B088]
gi|300816372|ref|ZP_07096594.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
107-1]
gi|300822988|ref|ZP_07103123.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
119-7]
gi|300906981|ref|ZP_07124650.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
84-1]
gi|300926127|ref|ZP_07141940.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
182-1]
gi|300929472|ref|ZP_07144940.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
187-1]
gi|300937819|ref|ZP_07152615.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
21-1]
gi|300989866|ref|ZP_07178995.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
45-1]
gi|300996430|ref|ZP_07181438.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
200-1]
gi|301020815|ref|ZP_07184879.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
69-1]
gi|301046048|ref|ZP_07193228.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
185-1]
gi|301305210|ref|ZP_07211308.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
124-1]
gi|301327916|ref|ZP_07221087.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
78-1]
gi|306812867|ref|ZP_07447060.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
NC101]
gi|307314811|ref|ZP_07594405.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli W]
gi|309797437|ref|ZP_07691829.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
145-7]
gi|312965154|ref|ZP_07779391.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2362-75]
gi|312970801|ref|ZP_07784980.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
1827-70]
gi|331645873|ref|ZP_08346976.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M605]
gi|331656741|ref|ZP_08357703.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA206]
gi|331662077|ref|ZP_08363000.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA143]
gi|331667090|ref|ZP_08367955.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA271]
gi|331676406|ref|ZP_08377103.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H591]
gi|331682155|ref|ZP_08382777.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H299]
gi|332282428|ref|ZP_08394841.1| succinate dehydrogenase iron-sulfur subunit [Shigella sp. D9]
gi|378713912|ref|YP_005278805.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli KO11FL]
gi|383177295|ref|YP_005455300.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei 53G]
gi|384542176|ref|YP_005726238.1| Succinate dehydrogenase, iron sulfur protein [Shigella flexneri
2002017]
gi|386598447|ref|YP_006099953.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
IHE3034]
gi|386605377|ref|YP_006111677.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
UM146]
gi|386608050|ref|YP_006123536.1| succinate dehydrogenase, FeS subunit [Escherichia coli W]
gi|386612890|ref|YP_006132556.1| succinate dehydrogenase, iron-sulfur subunit SdhB [Escherichia coli
UMNK88]
gi|386618176|ref|YP_006137756.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
NA114]
gi|386623100|ref|YP_006142828.1| succinate dehydrogenase, FeS subunit [Escherichia coli O7:K1 str.
CE10]
gi|386628264|ref|YP_006147984.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli str.
'clone D i2']
gi|386633184|ref|YP_006152903.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli str.
'clone D i14']
gi|386638084|ref|YP_006104882.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli ABU
83972]
gi|386702507|ref|YP_006166344.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KO11FL]
gi|386708491|ref|YP_006172212.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli W]
gi|387505767|ref|YP_006158023.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O55:H7 str. RM12579]
gi|387611210|ref|YP_006114326.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli ETEC
H10407]
gi|387615988|ref|YP_006119010.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|387828710|ref|YP_003348647.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli SE15]
gi|387881284|ref|YP_006311586.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
Xuzhou21]
gi|404374052|ref|ZP_10979273.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
1_1_43]
gi|407468139|ref|YP_006785419.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483129|ref|YP_006780278.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483682|ref|YP_006771228.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|414574927|ref|ZP_11432135.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei
3233-85]
gi|415804940|ref|ZP_11501171.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
E128010]
gi|415814917|ref|ZP_11506515.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
LT-68]
gi|415818880|ref|ZP_11508496.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
OK1180]
gi|415827874|ref|ZP_11514643.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
OK1357]
gi|415836587|ref|ZP_11518938.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
RN587/1]
gi|415852686|ref|ZP_11529023.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei 53G]
gi|415855585|ref|ZP_11530874.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a
str. 2457T]
gi|415860611|ref|ZP_11534326.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
85-1]
gi|415878930|ref|ZP_11544499.1| succinate dehydrogenase, iron-sulfur protein [Escherichia coli MS
79-10]
gi|416259760|ref|ZP_11640090.1| Succinate dehydrogenase iron-sulfur protein [Shigella dysenteriae
CDC 74-1112]
gi|416285565|ref|ZP_11647787.1| Succinate dehydrogenase iron-sulfur protein [Shigella boydii ATCC
9905]
gi|416305537|ref|ZP_11654326.1| Succinate dehydrogenase iron-sulfur protein [Shigella flexneri CDC
796-83]
gi|416312784|ref|ZP_11657805.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O157:H7 str. 1044]
gi|416317073|ref|ZP_11660205.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O157:H7 str. EC1212]
gi|416325356|ref|ZP_11665764.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O157:H7 str. 1125]
gi|416337782|ref|ZP_11674096.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
WV_060327]
gi|416346196|ref|ZP_11679467.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
EC4100B]
gi|416781474|ref|ZP_11877253.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. G5101]
gi|416792682|ref|ZP_11882148.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H- str. 493-89]
gi|416803998|ref|ZP_11887019.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H- str. H 2687]
gi|416815006|ref|ZP_11891716.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O55:H7 str. 3256-97]
gi|416825022|ref|ZP_11896311.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|416896221|ref|ZP_11926085.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_7v]
gi|417083183|ref|ZP_11951319.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
cloneA_i1]
gi|417118713|ref|ZP_11969231.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
1.2741]
gi|417128856|ref|ZP_11975643.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0246]
gi|417132501|ref|ZP_11977286.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
5.0588]
gi|417139301|ref|ZP_11982723.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0259]
gi|417144165|ref|ZP_11985971.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
1.2264]
gi|417152778|ref|ZP_11991569.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0497]
gi|417161383|ref|ZP_11997619.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0741]
gi|417176851|ref|ZP_12006647.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.2608]
gi|417179640|ref|ZP_12007630.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
93.0624]
gi|417193511|ref|ZP_12015358.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
4.0522]
gi|417219208|ref|ZP_12024050.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
JB1-95]
gi|417224375|ref|ZP_12027666.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.154]
gi|417230017|ref|ZP_12031603.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
5.0959]
gi|417242547|ref|ZP_12037764.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
9.0111]
gi|417252498|ref|ZP_12044257.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
4.0967]
gi|417268202|ref|ZP_12055563.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.3884]
gi|417284571|ref|ZP_12071866.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3003]
gi|417288718|ref|ZP_12076003.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TW07793]
gi|417307187|ref|ZP_12094061.1| Succinate dehydrogenase subunit B [Escherichia coli PCN033]
gi|417579990|ref|ZP_12230808.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_B2F1]
gi|417590410|ref|ZP_12241127.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2534-86]
gi|417595649|ref|ZP_12246312.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3030-1]
gi|417601060|ref|ZP_12251642.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_94C]
gi|417606833|ref|ZP_12257357.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_DG131-3]
gi|417622042|ref|ZP_12272368.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_H.1.8]
gi|417627645|ref|ZP_12277892.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_MHI813]
gi|417638047|ref|ZP_12288215.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TX1999]
gi|417661255|ref|ZP_12310836.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli AA86]
gi|417665866|ref|ZP_12315428.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_O31]
gi|417671445|ref|ZP_12320936.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae
155-74]
gi|417680907|ref|ZP_12330289.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
3594-74]
gi|417688493|ref|ZP_12337736.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
5216-82]
gi|417700391|ref|ZP_12349531.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-218]
gi|417706198|ref|ZP_12355261.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
VA-6]
gi|417711292|ref|ZP_12360298.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-272]
gi|417715743|ref|ZP_12364677.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-227]
gi|417721699|ref|ZP_12370544.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-304]
gi|417726999|ref|ZP_12375743.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-671]
gi|417732256|ref|ZP_12380926.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
2747-71]
gi|417737441|ref|ZP_12386047.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
4343-70]
gi|417742099|ref|ZP_12390650.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
2930-71]
gi|417754477|ref|ZP_12402572.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2B]
gi|417804040|ref|ZP_12451073.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. LB226692]
gi|417826645|ref|ZP_12473221.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
J1713]
gi|417831795|ref|ZP_12478316.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|417863951|ref|ZP_12508998.1| sdhB [Escherichia coli O104:H4 str. C227-11]
gi|418042801|ref|ZP_12680987.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli W26]
gi|418253980|ref|ZP_12878882.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
6603-63]
gi|418262847|ref|ZP_12884131.1| succinate dehydrogenase iron-sulfur protein [Shigella sonnei str.
Moseley]
gi|418944386|ref|ZP_13497454.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H43 str. T22]
gi|418995474|ref|ZP_13543088.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1A]
gi|419000867|ref|ZP_13548426.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1B]
gi|419006379|ref|ZP_13553835.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1C]
gi|419012243|ref|ZP_13559608.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC1D]
gi|419017149|ref|ZP_13564475.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1E]
gi|419022839|ref|ZP_13570081.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC2A]
gi|419027649|ref|ZP_13574848.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2C]
gi|419033447|ref|ZP_13580545.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2D]
gi|419038429|ref|ZP_13585488.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2E]
gi|419043917|ref|ZP_13590890.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3A]
gi|419049322|ref|ZP_13596239.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3B]
gi|419055383|ref|ZP_13602238.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3C]
gi|419060980|ref|ZP_13607762.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3D]
gi|419066949|ref|ZP_13613535.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3E]
gi|419078133|ref|ZP_13623628.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3F]
gi|419079069|ref|ZP_13624551.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4A]
gi|419084695|ref|ZP_13630108.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4B]
gi|419090743|ref|ZP_13636061.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4C]
gi|419096478|ref|ZP_13641722.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4D]
gi|419102457|ref|ZP_13647623.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4E]
gi|419107807|ref|ZP_13652917.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4F]
gi|419118078|ref|ZP_13663077.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5A]
gi|419119213|ref|ZP_13664192.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5B]
gi|419124906|ref|ZP_13669806.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5C]
gi|419130459|ref|ZP_13675308.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5D]
gi|419135191|ref|ZP_13679998.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC5E]
gi|419168713|ref|ZP_13713107.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC7A]
gi|419174304|ref|ZP_13718157.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC7B]
gi|419179695|ref|ZP_13723318.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC7C]
gi|419185254|ref|ZP_13728776.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC7D]
gi|419190706|ref|ZP_13734172.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC7E]
gi|419195832|ref|ZP_13739237.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC8A]
gi|419201867|ref|ZP_13745092.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC8B]
gi|419219989|ref|ZP_13762942.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC8E]
gi|419225438|ref|ZP_13768325.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9A]
gi|419231333|ref|ZP_13774123.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9B]
gi|419236608|ref|ZP_13779357.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9C]
gi|419242183|ref|ZP_13784831.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9D]
gi|419247633|ref|ZP_13790244.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9E]
gi|419276941|ref|ZP_13819202.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC10E]
gi|419282640|ref|ZP_13824856.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC10F]
gi|419288183|ref|ZP_13830298.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC11A]
gi|419293521|ref|ZP_13835580.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC11B]
gi|419299005|ref|ZP_13841019.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC11C]
gi|419305267|ref|ZP_13847178.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC11D]
gi|419310324|ref|ZP_13852196.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC11E]
gi|419315602|ref|ZP_13857427.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC12A]
gi|419321449|ref|ZP_13863185.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC12B]
gi|419327666|ref|ZP_13869295.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC12C]
gi|419333099|ref|ZP_13874658.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC12D]
gi|419338501|ref|ZP_13879987.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC12E]
gi|419344351|ref|ZP_13885733.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13A]
gi|419348789|ref|ZP_13890142.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13B]
gi|419353704|ref|ZP_13894987.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13C]
gi|419359033|ref|ZP_13900263.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13D]
gi|419364029|ref|ZP_13905210.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13E]
gi|419368990|ref|ZP_13910118.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC14A]
gi|419374390|ref|ZP_13915441.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC14B]
gi|419379667|ref|ZP_13920643.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC14C]
gi|419384875|ref|ZP_13925774.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC14D]
gi|419390122|ref|ZP_13930959.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15A]
gi|419395293|ref|ZP_13936076.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15B]
gi|419400647|ref|ZP_13941378.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15C]
gi|419405821|ref|ZP_13946523.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15D]
gi|419411312|ref|ZP_13951983.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15E]
gi|419699589|ref|ZP_14227204.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
SCI-07]
gi|419805408|ref|ZP_14330545.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli AI27]
gi|419866109|ref|ZP_14388480.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|419871194|ref|ZP_14393254.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|419889551|ref|ZP_14409936.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|419896148|ref|ZP_14415888.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|419911575|ref|ZP_14430047.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KD1]
gi|419917785|ref|ZP_14436009.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KD2]
gi|419924477|ref|ZP_14442366.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
541-15]
gi|419928851|ref|ZP_14446556.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
541-1]
gi|419952305|ref|ZP_14468476.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
CUMT8]
gi|420090232|ref|ZP_14602005.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|420096388|ref|ZP_14607779.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|420270243|ref|ZP_14772602.1| succinate dehydrogenase [Escherichia coli PA22]
gi|420273773|ref|ZP_14776106.1| succinate dehydrogenase [Escherichia coli PA40]
gi|420279010|ref|ZP_14781276.1| succinate dehydrogenase [Escherichia coli TW06591]
gi|420285197|ref|ZP_14787414.1| succinate dehydrogenase [Escherichia coli TW10246]
gi|420290857|ref|ZP_14793021.1| succinate dehydrogenase [Escherichia coli TW11039]
gi|420297869|ref|ZP_14799936.1| succinate dehydrogenase [Escherichia coli TW09109]
gi|420302654|ref|ZP_14804683.1| succinate dehydrogenase [Escherichia coli TW10119]
gi|420308114|ref|ZP_14810086.1| succinate dehydrogenase [Escherichia coli EC1738]
gi|420313658|ref|ZP_14815564.1| succinate dehydrogenase [Escherichia coli EC1734]
gi|420318958|ref|ZP_14820814.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
2850-71]
gi|420324242|ref|ZP_14826027.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
CCH060]
gi|420329781|ref|ZP_14831485.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-1770]
gi|420334874|ref|ZP_14836494.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-315]
gi|420340236|ref|ZP_14841761.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-404]
gi|420345944|ref|ZP_14847371.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
965-58]
gi|420351481|ref|ZP_14852671.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
4444-74]
gi|420357272|ref|ZP_14858287.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei
3226-85]
gi|420362162|ref|ZP_14863085.1| succinate dehydrogenase iron-sulfur protein [Shigella sonnei
4822-66]
gi|420370548|ref|ZP_14871096.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
1235-66]
gi|420379010|ref|ZP_14878503.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae
225-75]
gi|420384349|ref|ZP_14883735.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
EPECa12]
gi|420390132|ref|ZP_14889400.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli EPEC
C342-62]
gi|421681417|ref|ZP_16121244.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
1485-80]
gi|421777666|ref|ZP_16214259.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli AD30]
gi|421810955|ref|ZP_16246757.1| succinate dehydrogenase [Escherichia coli 8.0416]
gi|421817032|ref|ZP_16252590.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
10.0821]
gi|421822425|ref|ZP_16257862.1| succinate dehydrogenase [Escherichia coli FRIK920]
gi|421829159|ref|ZP_16264487.1| succinate dehydrogenase [Escherichia coli PA7]
gi|422330981|ref|ZP_16411998.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
4_1_47FAA]
gi|422351596|ref|ZP_16432408.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
117-3]
gi|422359036|ref|ZP_16439685.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
110-3]
gi|422365276|ref|ZP_16445778.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
153-1]
gi|422369001|ref|ZP_16449404.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
16-3]
gi|422378328|ref|ZP_16458551.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
60-1]
gi|422382555|ref|ZP_16462715.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
57-2]
gi|422748262|ref|ZP_16802175.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H252]
gi|422753336|ref|ZP_16807163.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H263]
gi|422763863|ref|ZP_16817616.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli E1167]
gi|422765249|ref|ZP_16818976.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli E1520]
gi|422775455|ref|ZP_16829111.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H120]
gi|422782501|ref|ZP_16835286.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli TW10509]
gi|422785321|ref|ZP_16838060.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H489]
gi|422800073|ref|ZP_16848571.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli M863]
gi|422804686|ref|ZP_16853118.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia fergusonii B253]
gi|422827916|ref|ZP_16876089.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B093]
gi|422839195|ref|ZP_16887167.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H397]
gi|422959143|ref|ZP_16971074.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H494]
gi|422970564|ref|ZP_16974076.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA124]
gi|422991403|ref|ZP_16982174.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. C227-11]
gi|422993345|ref|ZP_16984109.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. C236-11]
gi|422998557|ref|ZP_16989313.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|423007018|ref|ZP_16997761.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|423008663|ref|ZP_16999401.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|423022851|ref|ZP_17013554.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|423028003|ref|ZP_17018696.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|423033836|ref|ZP_17024520.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|423036703|ref|ZP_17027377.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041822|ref|ZP_17032489.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048511|ref|ZP_17039168.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423052094|ref|ZP_17040902.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423059060|ref|ZP_17047856.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423659328|ref|ZP_17634582.1| succinate dehydrogenase [Escherichia coli PA31]
gi|423708650|ref|ZP_17683028.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B799]
gi|424075590|ref|ZP_17812944.1| succinate dehydrogenase [Escherichia coli FDA505]
gi|424081922|ref|ZP_17818787.1| succinate dehydrogenase [Escherichia coli FDA517]
gi|424088547|ref|ZP_17824810.1| succinate dehydrogenase [Escherichia coli FRIK1996]
gi|424094764|ref|ZP_17830523.1| succinate dehydrogenase [Escherichia coli FRIK1985]
gi|424101171|ref|ZP_17836337.1| succinate dehydrogenase [Escherichia coli FRIK1990]
gi|424107976|ref|ZP_17842561.1| succinate dehydrogenase [Escherichia coli 93-001]
gi|424113964|ref|ZP_17848123.1| succinate dehydrogenase [Escherichia coli PA3]
gi|424120024|ref|ZP_17853743.1| succinate dehydrogenase [Escherichia coli PA5]
gi|424126276|ref|ZP_17859485.1| succinate dehydrogenase [Escherichia coli PA9]
gi|424132376|ref|ZP_17865184.1| succinate dehydrogenase [Escherichia coli PA10]
gi|424138918|ref|ZP_17871220.1| succinate dehydrogenase [Escherichia coli PA14]
gi|424145358|ref|ZP_17877136.1| succinate dehydrogenase [Escherichia coli PA15]
gi|424151495|ref|ZP_17882757.1| succinate dehydrogenase [Escherichia coli PA24]
gi|424185280|ref|ZP_17888196.1| succinate dehydrogenase [Escherichia coli PA25]
gi|424269024|ref|ZP_17894100.1| succinate dehydrogenase [Escherichia coli PA28]
gi|424423741|ref|ZP_17899828.1| succinate dehydrogenase [Escherichia coli PA32]
gi|424453903|ref|ZP_17905448.1| succinate dehydrogenase [Escherichia coli PA33]
gi|424460216|ref|ZP_17911151.1| succinate dehydrogenase [Escherichia coli PA39]
gi|424466685|ref|ZP_17916881.1| succinate dehydrogenase [Escherichia coli PA41]
gi|424473243|ref|ZP_17922926.1| succinate dehydrogenase [Escherichia coli PA42]
gi|424479189|ref|ZP_17928441.1| succinate dehydrogenase [Escherichia coli TW07945]
gi|424485254|ref|ZP_17934126.1| succinate dehydrogenase [Escherichia coli TW09098]
gi|424491412|ref|ZP_17939785.1| succinate dehydrogenase [Escherichia coli TW09195]
gi|424498467|ref|ZP_17945749.1| succinate dehydrogenase [Escherichia coli EC4203]
gi|424504694|ref|ZP_17951480.1| succinate dehydrogenase [Escherichia coli EC4196]
gi|424510963|ref|ZP_17957195.1| succinate dehydrogenase [Escherichia coli TW14313]
gi|424518525|ref|ZP_17962957.1| succinate dehydrogenase [Escherichia coli TW14301]
gi|424524353|ref|ZP_17968384.1| succinate dehydrogenase [Escherichia coli EC4421]
gi|424530553|ref|ZP_17974189.1| succinate dehydrogenase [Escherichia coli EC4422]
gi|424536526|ref|ZP_17979798.1| succinate dehydrogenase [Escherichia coli EC4013]
gi|424542442|ref|ZP_17985265.1| succinate dehydrogenase [Escherichia coli EC4402]
gi|424548762|ref|ZP_17990976.1| succinate dehydrogenase [Escherichia coli EC4439]
gi|424555025|ref|ZP_17996751.1| succinate dehydrogenase [Escherichia coli EC4436]
gi|424561372|ref|ZP_18002667.1| succinate dehydrogenase [Escherichia coli EC4437]
gi|424567403|ref|ZP_18008326.1| succinate dehydrogenase [Escherichia coli EC4448]
gi|424573588|ref|ZP_18014020.1| succinate dehydrogenase [Escherichia coli EC1845]
gi|424579538|ref|ZP_18019479.1| succinate dehydrogenase [Escherichia coli EC1863]
gi|424771458|ref|ZP_18198601.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|424837115|ref|ZP_18261752.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 5a
str. M90T]
gi|425096217|ref|ZP_18499248.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.4870]
gi|425102362|ref|ZP_18505014.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
5.2239]
gi|425108153|ref|ZP_18510411.1| succinate dehydrogenase [Escherichia coli 6.0172]
gi|425123984|ref|ZP_18525569.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.0586]
gi|425130022|ref|ZP_18531128.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.2524]
gi|425136362|ref|ZP_18537093.1| succinate dehydrogenase [Escherichia coli 10.0833]
gi|425142261|ref|ZP_18542555.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
10.0869]
gi|425148573|ref|ZP_18548475.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
88.0221]
gi|425154191|ref|ZP_18553746.1| succinate dehydrogenase [Escherichia coli PA34]
gi|425160643|ref|ZP_18559823.1| succinate dehydrogenase [Escherichia coli FDA506]
gi|425166159|ref|ZP_18564975.1| succinate dehydrogenase [Escherichia coli FDA507]
gi|425172444|ref|ZP_18570848.1| succinate dehydrogenase [Escherichia coli FDA504]
gi|425178333|ref|ZP_18576393.1| succinate dehydrogenase [Escherichia coli FRIK1999]
gi|425184475|ref|ZP_18582107.1| succinate dehydrogenase [Escherichia coli FRIK1997]
gi|425191233|ref|ZP_18588367.1| succinate dehydrogenase [Escherichia coli NE1487]
gi|425197559|ref|ZP_18594213.1| succinate dehydrogenase [Escherichia coli NE037]
gi|425204218|ref|ZP_18600352.1| succinate dehydrogenase [Escherichia coli FRIK2001]
gi|425209972|ref|ZP_18605713.1| succinate dehydrogenase [Escherichia coli PA4]
gi|425216017|ref|ZP_18611342.1| succinate dehydrogenase [Escherichia coli PA23]
gi|425222592|ref|ZP_18617456.1| succinate dehydrogenase [Escherichia coli PA49]
gi|425228830|ref|ZP_18623232.1| succinate dehydrogenase [Escherichia coli PA45]
gi|425235133|ref|ZP_18629099.1| succinate dehydrogenase [Escherichia coli TT12B]
gi|425241133|ref|ZP_18634773.1| succinate dehydrogenase [Escherichia coli MA6]
gi|425247254|ref|ZP_18640467.1| succinate dehydrogenase [Escherichia coli 5905]
gi|425252983|ref|ZP_18645865.1| succinate dehydrogenase [Escherichia coli CB7326]
gi|425259300|ref|ZP_18651668.1| succinate dehydrogenase [Escherichia coli EC96038]
gi|425265400|ref|ZP_18657326.1| succinate dehydrogenase [Escherichia coli 5412]
gi|425276555|ref|ZP_18667895.1| succinate dehydrogenase [Escherichia coli ARS4.2123]
gi|425292856|ref|ZP_18683439.1| succinate dehydrogenase [Escherichia coli PA38]
gi|425298882|ref|ZP_18688931.1| succinate dehydrogenase [Escherichia coli 07798]
gi|425304195|ref|ZP_18693981.1| succinate dehydrogenase [Escherichia coli N1]
gi|425309584|ref|ZP_18699054.1| succinate dehydrogenase [Escherichia coli EC1735]
gi|425315506|ref|ZP_18704586.1| succinate dehydrogenase [Escherichia coli EC1736]
gi|425321571|ref|ZP_18710245.1| succinate dehydrogenase [Escherichia coli EC1737]
gi|425327762|ref|ZP_18715986.1| succinate dehydrogenase [Escherichia coli EC1846]
gi|425333945|ref|ZP_18721669.1| succinate dehydrogenase [Escherichia coli EC1847]
gi|425340358|ref|ZP_18727604.1| succinate dehydrogenase [Escherichia coli EC1848]
gi|425346232|ref|ZP_18733037.1| succinate dehydrogenase [Escherichia coli EC1849]
gi|425352458|ref|ZP_18738842.1| succinate dehydrogenase [Escherichia coli EC1850]
gi|425358451|ref|ZP_18744427.1| succinate dehydrogenase [Escherichia coli EC1856]
gi|425364557|ref|ZP_18750107.1| succinate dehydrogenase [Escherichia coli EC1862]
gi|425371006|ref|ZP_18755972.1| succinate dehydrogenase [Escherichia coli EC1864]
gi|425383791|ref|ZP_18767674.1| succinate dehydrogenase [Escherichia coli EC1866]
gi|425390489|ref|ZP_18773951.1| succinate dehydrogenase [Escherichia coli EC1868]
gi|425396610|ref|ZP_18779659.1| succinate dehydrogenase [Escherichia coli EC1869]
gi|425402600|ref|ZP_18785207.1| succinate dehydrogenase [Escherichia coli EC1870]
gi|425409141|ref|ZP_18791297.1| succinate dehydrogenase [Escherichia coli NE098]
gi|425415422|ref|ZP_18797062.1| succinate dehydrogenase [Escherichia coli FRIK523]
gi|425421373|ref|ZP_18802581.1| succinate dehydrogenase [Escherichia coli 0.1288]
gi|425426560|ref|ZP_18807612.1| succinate dehydrogenase [Escherichia coli 0.1304]
gi|427803786|ref|ZP_18970853.1| succinate dehydrogenase, iron sulfur protein [Escherichia coli
chi7122]
gi|427808376|ref|ZP_18975441.1| succinate dehydrogenase, iron sulfur protein [Escherichia coli]
gi|428945240|ref|ZP_19017877.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
88.1467]
gi|428951388|ref|ZP_19023512.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
88.1042]
gi|428957244|ref|ZP_19028931.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
89.0511]
gi|428963557|ref|ZP_19034743.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
90.0091]
gi|428969767|ref|ZP_19040397.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
90.0039]
gi|428976215|ref|ZP_19046384.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
90.2281]
gi|428981877|ref|ZP_19051608.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
93.0055]
gi|428988172|ref|ZP_19057461.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
93.0056]
gi|428993986|ref|ZP_19062892.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
94.0618]
gi|429000096|ref|ZP_19068600.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.0183]
gi|429006343|ref|ZP_19074247.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.1288]
gi|429012664|ref|ZP_19079916.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.0943]
gi|429018870|ref|ZP_19085649.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0428]
gi|429024560|ref|ZP_19090967.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0427]
gi|429030880|ref|ZP_19096754.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0939]
gi|429037068|ref|ZP_19102503.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0932]
gi|429042986|ref|ZP_19107986.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0107]
gi|429048766|ref|ZP_19113422.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0003]
gi|429054141|ref|ZP_19118627.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.1742]
gi|429059817|ref|ZP_19123957.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0007]
gi|429065288|ref|ZP_19129145.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0672]
gi|429071849|ref|ZP_19135200.1| succinate dehydrogenase [Escherichia coli 99.0678]
gi|429077164|ref|ZP_19140377.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0713]
gi|429722893|ref|ZP_19257784.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429775065|ref|ZP_19307065.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429780251|ref|ZP_19312203.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784302|ref|ZP_19316214.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429789639|ref|ZP_19321514.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429795869|ref|ZP_19327695.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429801797|ref|ZP_19333574.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429805429|ref|ZP_19337175.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429810238|ref|ZP_19341940.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429815998|ref|ZP_19347657.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429821586|ref|ZP_19353199.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429824360|ref|ZP_19355852.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0109]
gi|429830716|ref|ZP_19361562.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0010]
gi|429907257|ref|ZP_19373225.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911452|ref|ZP_19377408.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917293|ref|ZP_19383233.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922331|ref|ZP_19388252.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429923184|ref|ZP_19389100.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429932079|ref|ZP_19397973.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933680|ref|ZP_19399570.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939339|ref|ZP_19405213.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946981|ref|ZP_19412836.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949611|ref|ZP_19415459.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957891|ref|ZP_19423720.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432357016|ref|ZP_19600263.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE4]
gi|432361488|ref|ZP_19604673.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE5]
gi|432368672|ref|ZP_19611774.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE10]
gi|432375836|ref|ZP_19618845.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE12]
gi|432380355|ref|ZP_19623312.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE15]
gi|432386125|ref|ZP_19629023.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE16]
gi|432396613|ref|ZP_19639399.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE25]
gi|432405544|ref|ZP_19648266.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE28]
gi|432410732|ref|ZP_19653414.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE39]
gi|432420805|ref|ZP_19663361.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE178]
gi|432430779|ref|ZP_19673224.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE187]
gi|432435307|ref|ZP_19677708.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE188]
gi|432440050|ref|ZP_19682405.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE189]
gi|432445163|ref|ZP_19687471.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE191]
gi|432455593|ref|ZP_19697794.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE201]
gi|432464691|ref|ZP_19706799.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE205]
gi|432470100|ref|ZP_19712153.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE206]
gi|432480104|ref|ZP_19722067.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE210]
gi|432484423|ref|ZP_19726344.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE212]
gi|432488255|ref|ZP_19730142.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE213]
gi|432494532|ref|ZP_19736350.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE214]
gi|432498941|ref|ZP_19740718.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE216]
gi|432503371|ref|ZP_19745108.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE220]
gi|432512926|ref|ZP_19750162.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE224]
gi|432522816|ref|ZP_19759955.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE230]
gi|432542060|ref|ZP_19778918.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE236]
gi|432547404|ref|ZP_19784198.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE237]
gi|432552679|ref|ZP_19789410.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE47]
gi|432557711|ref|ZP_19794401.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE49]
gi|432567502|ref|ZP_19804029.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE53]
gi|432572665|ref|ZP_19809156.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE55]
gi|432579379|ref|ZP_19815811.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE56]
gi|432582789|ref|ZP_19819199.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE57]
gi|432586970|ref|ZP_19823341.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE58]
gi|432591781|ref|ZP_19828110.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE60]
gi|432596612|ref|ZP_19832895.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE62]
gi|432601256|ref|ZP_19837506.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE66]
gi|432606548|ref|ZP_19842743.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE67]
gi|432610402|ref|ZP_19846574.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE72]
gi|432615552|ref|ZP_19851680.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE75]
gi|432620790|ref|ZP_19856833.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE76]
gi|432645160|ref|ZP_19880960.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE86]
gi|432650191|ref|ZP_19885953.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE87]
gi|432654958|ref|ZP_19890671.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE93]
gi|432669633|ref|ZP_19905175.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE119]
gi|432673688|ref|ZP_19909183.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE142]
gi|432679137|ref|ZP_19914537.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE143]
gi|432693481|ref|ZP_19928693.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE162]
gi|432698038|ref|ZP_19933205.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE169]
gi|432709527|ref|ZP_19944594.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE6]
gi|432712390|ref|ZP_19947440.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE8]
gi|432717754|ref|ZP_19952752.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE9]
gi|432722243|ref|ZP_19957167.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE17]
gi|432726785|ref|ZP_19961667.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE18]
gi|432740471|ref|ZP_19975193.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE23]
gi|432744658|ref|ZP_19979358.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE43]
gi|432749161|ref|ZP_19983776.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE29]
gi|432753469|ref|ZP_19988036.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE22]
gi|432764049|ref|ZP_19998498.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE48]
gi|432769565|ref|ZP_20003919.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE50]
gi|432777608|ref|ZP_20011859.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE59]
gi|432782570|ref|ZP_20016756.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE63]
gi|432786397|ref|ZP_20020563.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE65]
gi|432791934|ref|ZP_20026025.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE78]
gi|432797897|ref|ZP_20031923.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE79]
gi|432800952|ref|ZP_20034939.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE84]
gi|432804804|ref|ZP_20038746.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE91]
gi|432812828|ref|ZP_20046674.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE101]
gi|432814252|ref|ZP_20048043.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE115]
gi|432819989|ref|ZP_20053703.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE118]
gi|432826204|ref|ZP_20059860.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE123]
gi|432830701|ref|ZP_20064285.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE135]
gi|432833747|ref|ZP_20067290.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE136]
gi|432838272|ref|ZP_20071762.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE140]
gi|432842950|ref|ZP_20076371.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE141]
gi|432849026|ref|ZP_20080396.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE144]
gi|432873403|ref|ZP_20093030.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE147]
gi|432880310|ref|ZP_20097001.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE154]
gi|432893457|ref|ZP_20105469.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE165]
gi|432897541|ref|ZP_20108450.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE192]
gi|432903063|ref|ZP_20112680.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE194]
gi|432917873|ref|ZP_20122356.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE173]
gi|432925179|ref|ZP_20127270.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE175]
gi|432933191|ref|ZP_20132912.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE184]
gi|432942678|ref|ZP_20139937.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE183]
gi|432945864|ref|ZP_20141646.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE196]
gi|432960207|ref|ZP_20150413.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE202]
gi|432966826|ref|ZP_20155743.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE203]
gi|432970844|ref|ZP_20159722.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE207]
gi|432977388|ref|ZP_20166213.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE209]
gi|432980199|ref|ZP_20168978.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE211]
gi|432984360|ref|ZP_20173098.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE215]
gi|432989784|ref|ZP_20178451.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE217]
gi|432994459|ref|ZP_20183075.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE218]
gi|432998877|ref|ZP_20187417.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE223]
gi|433004197|ref|ZP_20192635.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE227]
gi|433011406|ref|ZP_20199811.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE229]
gi|433012903|ref|ZP_20201281.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE104]
gi|433022528|ref|ZP_20210543.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE106]
gi|433027711|ref|ZP_20215586.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE109]
gi|433037664|ref|ZP_20225280.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE113]
gi|433042218|ref|ZP_20229743.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE117]
gi|433057023|ref|ZP_20244107.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE124]
gi|433061960|ref|ZP_20248918.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE125]
gi|433071778|ref|ZP_20258474.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE129]
gi|433076890|ref|ZP_20263454.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE131]
gi|433081614|ref|ZP_20268088.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE133]
gi|433086337|ref|ZP_20272734.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE137]
gi|433091055|ref|ZP_20277352.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE138]
gi|433095623|ref|ZP_20281835.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE139]
gi|433100240|ref|ZP_20286350.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE145]
gi|433104832|ref|ZP_20290852.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE148]
gi|433110006|ref|ZP_20295881.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE150]
gi|433114614|ref|ZP_20300430.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE153]
gi|433119280|ref|ZP_20304988.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE157]
gi|433124273|ref|ZP_20309862.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE160]
gi|433129080|ref|ZP_20314550.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE163]
gi|433133894|ref|ZP_20319269.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE166]
gi|433138292|ref|ZP_20323579.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE167]
gi|433143308|ref|ZP_20328475.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE168]
gi|433148120|ref|ZP_20333186.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE174]
gi|433152821|ref|ZP_20337788.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE176]
gi|433162522|ref|ZP_20347281.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE179]
gi|433167531|ref|ZP_20352199.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE180]
gi|433172558|ref|ZP_20357113.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE232]
gi|433182266|ref|ZP_20366563.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE85]
gi|433187516|ref|ZP_20371635.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE88]
gi|433192669|ref|ZP_20376684.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE90]
gi|433197288|ref|ZP_20381213.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE94]
gi|433202206|ref|ZP_20386007.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE95]
gi|433206847|ref|ZP_20390545.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE97]
gi|433211592|ref|ZP_20395207.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE99]
gi|433323408|ref|ZP_20400757.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli J96]
gi|442599549|ref|ZP_21017267.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442606943|ref|ZP_21021738.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
Nissle 1917]
gi|443616748|ref|YP_007380604.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli APEC
O78]
gi|444923063|ref|ZP_21242768.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
09BKT078844]
gi|444929394|ref|ZP_21248541.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0814]
gi|444934711|ref|ZP_21253645.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0815]
gi|444940289|ref|ZP_21258931.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0816]
gi|444945877|ref|ZP_21264292.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0839]
gi|444951433|ref|ZP_21269653.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0848]
gi|444956886|ref|ZP_21274881.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1753]
gi|444962194|ref|ZP_21279941.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1775]
gi|444967919|ref|ZP_21285391.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1793]
gi|444973420|ref|ZP_21290697.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1805]
gi|444978967|ref|ZP_21295957.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli ATCC
700728]
gi|444984258|ref|ZP_21301123.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA11]
gi|444989502|ref|ZP_21306238.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA19]
gi|444994852|ref|ZP_21311444.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA13]
gi|445000355|ref|ZP_21316813.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA2]
gi|445005815|ref|ZP_21322150.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA47]
gi|445013188|ref|ZP_21329300.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA48]
gi|445016756|ref|ZP_21332801.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA8]
gi|445022209|ref|ZP_21338127.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
7.1982]
gi|445027456|ref|ZP_21343229.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1781]
gi|445032949|ref|ZP_21348568.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1762]
gi|445038643|ref|ZP_21354109.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA35]
gi|445043944|ref|ZP_21359277.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.4880]
gi|445049430|ref|ZP_21364592.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.0083]
gi|445055085|ref|ZP_21370031.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0670]
gi|450186368|ref|ZP_21889453.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
SEPT362]
gi|450212083|ref|ZP_21894456.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O08]
gi|452969653|ref|ZP_21967880.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4009]
gi|12513639|gb|AAG55048.1|AE005250_7 succinate dehydrogenase, iron sulfur protein [Escherichia coli
O157:H7 str. EDL933]
gi|26107091|gb|AAN79275.1|AE016757_179 Succinate dehydrogenase iron-sulfur protein [Escherichia coli
CFT073]
gi|13360207|dbj|BAB34172.1| succinate dehydrogenase [Escherichia coli O157:H7 str. Sakai]
gi|24050816|gb|AAN42217.1| succinate dehydrogenase, iron sulfur protein [Shigella flexneri 2a
str. 301]
gi|30040358|gb|AAP16090.1| succinate dehydrogenase, iron sulfur protein [Shigella flexneri 2a
str. 2457T]
gi|73854725|gb|AAZ87432.1| succinate dehydrogenase, iron sulfur protein [Shigella sonnei
Ss046]
gi|81244562|gb|ABB65270.1| succinate dehydrogenase, iron sulfur protein [Shigella boydii
Sb227]
gi|91071332|gb|ABE06213.1| succinate dehydrogenase, iron sulfur protein [Escherichia coli
UTI89]
gi|110342525|gb|ABG68762.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 536]
gi|110614196|gb|ABF02863.1| succinate dehydrogenase, iron sulfur protein [Shigella flexneri 5
str. 8401]
gi|115512042|gb|ABJ00117.1| succinate dehydrogenase, FeS subunit [Escherichia coli APEC O1]
gi|157065884|gb|ABV05139.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli HS]
gi|157078243|gb|ABV17951.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
E24377A]
gi|169755859|gb|ACA78558.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli ATCC 8739]
gi|170122190|gb|EDS91121.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia albertii
TW07627]
gi|170518805|gb|ACB16983.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
SMS-3-5]
gi|187429890|gb|ACD09164.1| succinate dehydrogenase, iron-sulfur subunit [Shigella boydii CDC
3083-94]
gi|187767237|gb|EDU31081.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4196]
gi|188015206|gb|EDU53328.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4113]
gi|188488428|gb|EDU63531.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
53638]
gi|189002720|gb|EDU71706.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4076]
gi|189355789|gb|EDU74208.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4401]
gi|189363538|gb|EDU81957.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4486]
gi|189365939|gb|EDU84355.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4501]
gi|189373026|gb|EDU91442.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC869]
gi|189376469|gb|EDU94885.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC508]
gi|190902766|gb|EDV62496.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli B7A]
gi|190905678|gb|EDV65301.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli F11]
gi|192926829|gb|EDV81455.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli E22]
gi|192956054|gb|EDV86520.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
E110019]
gi|194412893|gb|EDX29184.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
B171]
gi|194417752|gb|EDX33850.1| succinate dehydrogenase, iron-sulfur subunit [Shigella dysenteriae
1012]
gi|194421835|gb|EDX37842.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
101-1]
gi|208727006|gb|EDZ76607.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4206]
gi|208731544|gb|EDZ80232.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4045]
gi|208737349|gb|EDZ85033.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4042]
gi|209161450|gb|ACI38883.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. EC4115]
gi|209776508|gb|ACI86566.1| succinate dehydrogenase [Escherichia coli]
gi|209776510|gb|ACI86567.1| succinate dehydrogenase [Escherichia coli]
gi|209776512|gb|ACI86568.1| succinate dehydrogenase [Escherichia coli]
gi|209776514|gb|ACI86569.1| succinate dehydrogenase [Escherichia coli]
gi|209776516|gb|ACI86570.1| succinate dehydrogenase [Escherichia coli]
gi|209911234|dbj|BAG76308.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli SE11]
gi|215263815|emb|CAS08152.1| succinate dehydrogenase, FeS subunit [Escherichia coli O127:H6 str.
E2348/69]
gi|217320394|gb|EEC28818.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O157:H7 str. TW14588]
gi|218350880|emb|CAU96578.1| succinate dehydrogenase, FeS subunit [Escherichia coli 55989]
gi|218357252|emb|CAQ89887.1| succinate dehydrogenase, FeS subunit [Escherichia fergusonii ATCC
35469]
gi|218360019|emb|CAQ97566.1| succinate dehydrogenase, FeS subunit [Escherichia coli IAI1]
gi|218364409|emb|CAR02089.1| succinate dehydrogenase, FeS subunit [Escherichia coli S88]
gi|218369065|emb|CAR16819.1| succinate dehydrogenase, FeS subunit [Escherichia coli IAI39]
gi|218426082|emb|CAR06900.1| succinate dehydrogenase, FeS subunit [Escherichia coli ED1a]
gi|222032461|emb|CAP75200.1| Succinate dehydrogenase iron-sulfur subunit [Escherichia coli LF82]
gi|226898524|gb|EEH84783.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
3_2_53FAA]
gi|227838395|gb|EEJ48861.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
83972]
gi|254591270|gb|ACT70631.1| succinate dehydrogenase, FeS subunit [Escherichia coli O157:H7 str.
TW14359]
gi|257758078|dbj|BAI29575.1| succinate dehydrogenase, FeS subunit [Escherichia coli O103:H2 str.
12009]
gi|257763211|dbj|BAI34706.1| succinate dehydrogenase, FeS subunit [Escherichia coli O111:H- str.
11128]
gi|281177867|dbj|BAI54197.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli SE15]
gi|281599961|gb|ADA72945.1| Succinate dehydrogenase, iron sulfur protein [Shigella flexneri
2002017]
gi|290761529|gb|ADD55490.1| Succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
O55:H7 str. CB9615]
gi|291323812|gb|EFE63234.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli B088]
gi|291469566|gb|EFF12050.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B354]
gi|294489567|gb|ADE88323.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli
IHE3034]
gi|300301965|gb|EFJ58350.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
185-1]
gi|300304536|gb|EFJ59056.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
200-1]
gi|300398461|gb|EFJ81999.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
69-1]
gi|300401202|gb|EFJ84740.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
84-1]
gi|300407269|gb|EFJ90807.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
45-1]
gi|300417826|gb|EFK01137.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
182-1]
gi|300457184|gb|EFK20677.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
21-1]
gi|300462581|gb|EFK26074.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
187-1]
gi|300524529|gb|EFK45598.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
119-7]
gi|300531062|gb|EFK52124.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
107-1]
gi|300839522|gb|EFK67282.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
124-1]
gi|300845559|gb|EFK73319.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
78-1]
gi|305853630|gb|EFM54069.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
NC101]
gi|306905709|gb|EFN36237.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli W]
gi|307552576|gb|ADN45351.1| succinate dehydrogenase, iron-sulfur subunit [Escherichia coli ABU
83972]
gi|307627861|gb|ADN72165.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
UM146]
gi|308118961|gb|EFO56223.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
145-7]
gi|309700946|emb|CBJ00243.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli ETEC
H10407]
gi|310336562|gb|EFQ01729.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
1827-70]
gi|312290245|gb|EFR18128.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2362-75]
gi|312945249|gb|ADR26076.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|313649635|gb|EFS14059.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 2a
str. 2457T]
gi|315059967|gb|ADT74294.1| succinate dehydrogenase, FeS subunit [Escherichia coli W]
gi|315257641|gb|EFU37609.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
85-1]
gi|315287162|gb|EFU46574.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
110-3]
gi|315292037|gb|EFU51389.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
153-1]
gi|315299237|gb|EFU58491.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
16-3]
gi|320177267|gb|EFW52273.1| Succinate dehydrogenase iron-sulfur protein [Shigella dysenteriae
CDC 74-1112]
gi|320179436|gb|EFW54393.1| Succinate dehydrogenase iron-sulfur protein [Shigella boydii ATCC
9905]
gi|320182929|gb|EFW57798.1| Succinate dehydrogenase iron-sulfur protein [Shigella flexneri CDC
796-83]
gi|320193118|gb|EFW67758.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O157:H7 str. EC1212]
gi|320194118|gb|EFW68750.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
WV_060327]
gi|320198157|gb|EFW72761.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
EC4100B]
gi|320637971|gb|EFX07740.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H7 str. G5101]
gi|320643366|gb|EFX12546.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H- str. 493-89]
gi|320648715|gb|EFX17348.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H- str. H 2687]
gi|320654299|gb|EFX22352.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320659932|gb|EFX27474.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|323158774|gb|EFZ44787.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
E128010]
gi|323163882|gb|EFZ49692.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei 53G]
gi|323170843|gb|EFZ56493.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
LT-68]
gi|323180038|gb|EFZ65594.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
OK1180]
gi|323185117|gb|EFZ70483.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
OK1357]
gi|323191069|gb|EFZ76334.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
RN587/1]
gi|323379473|gb|ADX51741.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli KO11FL]
gi|323938302|gb|EGB34559.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli E1520]
gi|323947011|gb|EGB43025.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H120]
gi|323952717|gb|EGB48585.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H252]
gi|323958468|gb|EGB54174.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H263]
gi|323963105|gb|EGB58675.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli H489]
gi|323967431|gb|EGB62851.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli M863]
gi|323976305|gb|EGB71395.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli TW10509]
gi|324006248|gb|EGB75467.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
57-2]
gi|324010445|gb|EGB79664.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
60-1]
gi|324020369|gb|EGB89588.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
117-3]
gi|324114834|gb|EGC08802.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia fergusonii B253]
gi|324116265|gb|EGC10186.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli E1167]
gi|326341538|gb|EGD65328.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O157:H7 str. 1044]
gi|326345756|gb|EGD69495.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O157:H7 str. 1125]
gi|327254403|gb|EGE66025.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_7v]
gi|330910473|gb|EGH38983.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli AA86]
gi|331044625|gb|EGI16752.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M605]
gi|331054989|gb|EGI26998.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA206]
gi|331060499|gb|EGI32463.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA143]
gi|331065446|gb|EGI37339.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA271]
gi|331075899|gb|EGI47196.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H591]
gi|331080579|gb|EGI51755.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H299]
gi|332093784|gb|EGI98838.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
5216-82]
gi|332096488|gb|EGJ01484.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae
155-74]
gi|332097693|gb|EGJ02668.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
3594-74]
gi|332104780|gb|EGJ08126.1| succinate dehydrogenase iron-sulfur subunit [Shigella sp. D9]
gi|332342059|gb|AEE55393.1| succinate dehydrogenase, iron-sulfur subunit SdhB [Escherichia coli
UMNK88]
gi|332760911|gb|EGJ91199.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
4343-70]
gi|332761307|gb|EGJ91593.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
2747-71]
gi|332763958|gb|EGJ94196.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-671]
gi|332768179|gb|EGJ98364.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
2930-71]
gi|333007367|gb|EGK26847.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
VA-6]
gi|333007768|gb|EGK27244.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-218]
gi|333010161|gb|EGK29596.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-272]
gi|333021115|gb|EGK40372.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-227]
gi|333021574|gb|EGK40824.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-304]
gi|333968677|gb|AEG35482.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
NA114]
gi|335576845|gb|EGM63083.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
J1713]
gi|338771242|gb|EGP25988.1| Succinate dehydrogenase subunit B [Escherichia coli PCN033]
gi|340735451|gb|EGR64508.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|340741325|gb|EGR75473.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. LB226692]
gi|341917240|gb|EGT66856.1| sdhB [Escherichia coli O104:H4 str. C227-11]
gi|342927096|gb|EGU95818.1| succinate dehydrogenase, iron-sulfur protein [Escherichia coli MS
79-10]
gi|345343179|gb|EGW75569.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_B2F1]
gi|345344941|gb|EGW77300.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2534-86]
gi|345353066|gb|EGW85302.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_94C]
gi|345359969|gb|EGW92142.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3030-1]
gi|345364238|gb|EGW96364.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_DG131-3]
gi|345377949|gb|EGX09880.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_MHI813]
gi|345385490|gb|EGX15334.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_H.1.8]
gi|345395174|gb|EGX24925.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TX1999]
gi|349736838|gb|AEQ11544.1| succinate dehydrogenase, FeS subunit [Escherichia coli O7:K1 str.
CE10]
gi|354856406|gb|EHF16864.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|354857652|gb|EHF18105.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. C227-11]
gi|354864420|gb|EHF24849.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. C236-11]
gi|354874734|gb|EHF35100.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|354878693|gb|EHF39040.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|354882485|gb|EHF42807.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|354885077|gb|EHF45386.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|354887767|gb|EHF48036.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|354900359|gb|EHF60493.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354903937|gb|EHF64034.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354906343|gb|EHF66421.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917240|gb|EHF77207.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354921595|gb|EHF81518.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|355353051|gb|EHG02224.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
cloneA_i1]
gi|355419163|gb|AER83360.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli str.
'clone D i2']
gi|355424083|gb|AER88279.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli str.
'clone D i14']
gi|371595417|gb|EHN84267.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H494]
gi|371600344|gb|EHN89119.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TA124]
gi|371611216|gb|EHN99742.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H397]
gi|371615930|gb|EHO04307.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B093]
gi|373248230|gb|EHP67662.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
4_1_47FAA]
gi|374357761|gb|AEZ39468.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O55:H7 str. RM12579]
gi|375320312|gb|EHS66289.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O157:H43 str. T22]
gi|377848864|gb|EHU13840.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1A]
gi|377851180|gb|EHU16135.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1C]
gi|377853514|gb|EHU18413.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1B]
gi|377863008|gb|EHU27815.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC1D]
gi|377867123|gb|EHU31887.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC1E]
gi|377868477|gb|EHU33221.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC2A]
gi|377879423|gb|EHU43996.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2B]
gi|377883866|gb|EHU48384.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2D]
gi|377885532|gb|EHU50027.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2C]
gi|377898030|gb|EHU62393.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC2E]
gi|377900199|gb|EHU64537.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3A]
gi|377902146|gb|EHU66455.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3B]
gi|377913496|gb|EHU77633.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3C]
gi|377916886|gb|EHU80960.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3F]
gi|377917754|gb|EHU81811.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3D]
gi|377920219|gb|EHU84245.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC3E]
gi|377933176|gb|EHU97021.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4A]
gi|377938909|gb|EHV02668.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4B]
gi|377949313|gb|EHV12949.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4C]
gi|377951378|gb|EHV14997.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4D]
gi|377953964|gb|EHV17525.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5A]
gi|377954278|gb|EHV17838.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4E]
gi|377967678|gb|EHV31084.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC4F]
gi|377971831|gb|EHV35184.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5B]
gi|377979963|gb|EHV43233.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5C]
gi|377980005|gb|EHV43274.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC5D]
gi|377987501|gb|EHV50687.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC5E]
gi|378017931|gb|EHV80798.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC7A]
gi|378026880|gb|EHV89512.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC7C]
gi|378032672|gb|EHV95253.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC7D]
gi|378037161|gb|EHV99696.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC7B]
gi|378040769|gb|EHW03232.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC7E]
gi|378052027|gb|EHW14338.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC8A]
gi|378056267|gb|EHW18514.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC8B]
gi|378071841|gb|EHW33908.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC8E]
gi|378081026|gb|EHW42982.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9A]
gi|378081779|gb|EHW43728.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9B]
gi|378089831|gb|EHW51672.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9C]
gi|378094446|gb|EHW56244.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9D]
gi|378101145|gb|EHW62833.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC9E]
gi|378132110|gb|EHW93462.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC10E]
gi|378135685|gb|EHW96988.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC11A]
gi|378138610|gb|EHW99863.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC10F]
gi|378145718|gb|EHX06874.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC11B]
gi|378152401|gb|EHX13498.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC11D]
gi|378155793|gb|EHX16849.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC11C]
gi|378160631|gb|EHX21624.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC11E]
gi|378173700|gb|EHX34534.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC12B]
gi|378174056|gb|EHX34884.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC12A]
gi|378175669|gb|EHX36484.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC12C]
gi|378188779|gb|EHX49373.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13A]
gi|378190296|gb|EHX50881.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC12D]
gi|378193405|gb|EHX53944.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC12E]
gi|378204451|gb|EHX64867.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13B]
gi|378207681|gb|EHX68070.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13D]
gi|378207995|gb|EHX68380.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13C]
gi|378218777|gb|EHX79047.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC13E]
gi|378221651|gb|EHX81896.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC14A]
gi|378224453|gb|EHX84655.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC14B]
gi|378233050|gb|EHX93142.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC14C]
gi|378236467|gb|EHX96513.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC14D]
gi|378242885|gb|EHY02833.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15A]
gi|378250770|gb|EHY10673.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15B]
gi|378250952|gb|EHY10853.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15C]
gi|378257104|gb|EHY16946.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15D]
gi|378260989|gb|EHY20786.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC15E]
gi|380349293|gb|EIA37566.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
SCI-07]
gi|383394034|gb|AFH18992.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KO11FL]
gi|383404183|gb|AFH10426.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli W]
gi|383466167|gb|EID61188.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri 5a
str. M90T]
gi|383474266|gb|EID66259.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli W26]
gi|384471588|gb|EIE55662.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli AI27]
gi|385707371|gb|EIG44402.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B799]
gi|386138247|gb|EIG79407.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
1.2741]
gi|386143812|gb|EIG90288.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0246]
gi|386150355|gb|EIH01644.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
5.0588]
gi|386157029|gb|EIH13371.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0259]
gi|386164048|gb|EIH25834.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
1.2264]
gi|386169502|gb|EIH36010.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0497]
gi|386173919|gb|EIH45920.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0741]
gi|386179543|gb|EIH57022.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.2608]
gi|386186302|gb|EIH69019.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
93.0624]
gi|386190692|gb|EIH79440.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
4.0522]
gi|386192970|gb|EIH87278.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
JB1-95]
gi|386199423|gb|EIH98414.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.154]
gi|386206507|gb|EII11013.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
5.0959]
gi|386211535|gb|EII21991.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
9.0111]
gi|386216429|gb|EII32918.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
4.0967]
gi|386230560|gb|EII57915.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.3884]
gi|386242780|gb|EII84515.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3003]
gi|386247510|gb|EII93683.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TW07793]
gi|386794742|gb|AFJ27776.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
Xuzhou21]
gi|388336290|gb|EIL02837.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|388337666|gb|EIL04163.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|388357190|gb|EIL21782.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|388358903|gb|EIL23287.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|388389976|gb|EIL51480.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
541-15]
gi|388393115|gb|EIL54508.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KD2]
gi|388393288|gb|EIL54673.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KD1]
gi|388404896|gb|EIL65339.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
541-1]
gi|388412760|gb|EIL72797.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
CUMT8]
gi|390650389|gb|EIN28805.1| succinate dehydrogenase [Escherichia coli FRIK1996]
gi|390652383|gb|EIN30603.1| succinate dehydrogenase [Escherichia coli FDA517]
gi|390652820|gb|EIN30998.1| succinate dehydrogenase [Escherichia coli FDA505]
gi|390669446|gb|EIN46086.1| succinate dehydrogenase [Escherichia coli 93-001]
gi|390672479|gb|EIN48778.1| succinate dehydrogenase [Escherichia coli FRIK1990]
gi|390673116|gb|EIN49368.1| succinate dehydrogenase [Escherichia coli FRIK1985]
gi|390688342|gb|EIN63417.1| succinate dehydrogenase [Escherichia coli PA3]
gi|390691595|gb|EIN66331.1| succinate dehydrogenase [Escherichia coli PA9]
gi|390692562|gb|EIN67239.1| succinate dehydrogenase [Escherichia coli PA5]
gi|390708099|gb|EIN81379.1| succinate dehydrogenase [Escherichia coli PA10]
gi|390709813|gb|EIN82868.1| succinate dehydrogenase [Escherichia coli PA15]
gi|390711580|gb|EIN84551.1| succinate dehydrogenase [Escherichia coli PA14]
gi|390714455|gb|EIN87360.1| succinate dehydrogenase [Escherichia coli PA22]
gi|390733097|gb|EIO04693.1| succinate dehydrogenase [Escherichia coli PA25]
gi|390733131|gb|EIO04725.1| succinate dehydrogenase [Escherichia coli PA24]
gi|390736210|gb|EIO07552.1| succinate dehydrogenase [Escherichia coli PA28]
gi|390751659|gb|EIO21546.1| succinate dehydrogenase [Escherichia coli PA31]
gi|390751933|gb|EIO21797.1| succinate dehydrogenase [Escherichia coli PA32]
gi|390754543|gb|EIO24121.1| succinate dehydrogenase [Escherichia coli PA33]
gi|390762691|gb|EIO31949.1| succinate dehydrogenase [Escherichia coli PA40]
gi|390775801|gb|EIO43798.1| succinate dehydrogenase [Escherichia coli PA41]
gi|390777620|gb|EIO45407.1| succinate dehydrogenase [Escherichia coli PA42]
gi|390782400|gb|EIO50037.1| succinate dehydrogenase [Escherichia coli PA39]
gi|390785246|gb|EIO52797.1| succinate dehydrogenase [Escherichia coli TW06591]
gi|390794518|gb|EIO61809.1| succinate dehydrogenase [Escherichia coli TW10246]
gi|390801311|gb|EIO68372.1| succinate dehydrogenase [Escherichia coli TW11039]
gi|390808861|gb|EIO75680.1| succinate dehydrogenase [Escherichia coli TW09109]
gi|390809110|gb|EIO75916.1| succinate dehydrogenase [Escherichia coli TW07945]
gi|390818944|gb|EIO85300.1| succinate dehydrogenase [Escherichia coli TW10119]
gi|390822434|gb|EIO88554.1| succinate dehydrogenase [Escherichia coli TW09098]
gi|390836821|gb|EIP01300.1| succinate dehydrogenase [Escherichia coli EC4203]
gi|390839619|gb|EIP03718.1| succinate dehydrogenase [Escherichia coli EC4196]
gi|390840958|gb|EIP04933.1| succinate dehydrogenase [Escherichia coli TW09195]
gi|390855201|gb|EIP17940.1| succinate dehydrogenase [Escherichia coli TW14301]
gi|390858750|gb|EIP21121.1| succinate dehydrogenase [Escherichia coli TW14313]
gi|390859046|gb|EIP21412.1| succinate dehydrogenase [Escherichia coli EC4421]
gi|390871298|gb|EIP32726.1| succinate dehydrogenase [Escherichia coli EC4422]
gi|390875580|gb|EIP36589.1| succinate dehydrogenase [Escherichia coli EC4013]
gi|390885712|gb|EIP45908.1| succinate dehydrogenase [Escherichia coli EC4402]
gi|390887697|gb|EIP47627.1| succinate dehydrogenase [Escherichia coli EC4439]
gi|390894207|gb|EIP53736.1| succinate dehydrogenase [Escherichia coli EC4436]
gi|390903509|gb|EIP62555.1| succinate dehydrogenase [Escherichia coli EC1738]
gi|390910009|gb|EIP68772.1| succinate dehydrogenase [Escherichia coli EC4437]
gi|390911636|gb|EIP70330.1| succinate dehydrogenase [Escherichia coli EC1734]
gi|390914348|gb|EIP72890.1| succinate dehydrogenase [Escherichia coli EC4448]
gi|390924481|gb|EIP82239.1| succinate dehydrogenase [Escherichia coli EC1863]
gi|390925948|gb|EIP83555.1| succinate dehydrogenase [Escherichia coli EC1845]
gi|391254251|gb|EIQ13413.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
2850-71]
gi|391256621|gb|EIQ15747.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
CCH060]
gi|391258988|gb|EIQ18069.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-1770]
gi|391267465|gb|EIQ26401.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-315]
gi|391273425|gb|EIQ32250.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
K-404]
gi|391275225|gb|EIQ34017.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
965-58]
gi|391287709|gb|EIQ46225.1| succinate dehydrogenase iron-sulfur subunit [Shigella boydii
4444-74]
gi|391288353|gb|EIQ46858.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei
3226-85]
gi|391288543|gb|EIQ47044.1| succinate dehydrogenase iron-sulfur subunit [Shigella sonnei
3233-85]
gi|391296550|gb|EIQ54639.1| succinate dehydrogenase iron-sulfur protein [Shigella sonnei
4822-66]
gi|391306003|gb|EIQ63770.1| succinate dehydrogenase iron-sulfur subunit [Shigella dysenteriae
225-75]
gi|391309185|gb|EIQ66862.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
EPECa12]
gi|391314456|gb|EIQ72006.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli EPEC
C342-62]
gi|391320143|gb|EIQ77043.1| succinate dehydrogenase iron-sulfur subunit [Shigella flexneri
1235-66]
gi|394386470|gb|EJE63970.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|394389139|gb|EJE66330.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|397786417|gb|EJK97253.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_O31]
gi|397900733|gb|EJL17089.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
6603-63]
gi|397902926|gb|EJL19235.1| succinate dehydrogenase iron-sulfur protein [Shigella sonnei str.
Moseley]
gi|404292409|gb|EJZ49233.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
1_1_43]
gi|404341623|gb|EJZ68028.1| succinate dehydrogenase iron-sulfur protein [Shigella flexneri
1485-80]
gi|406778844|gb|AFS58268.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055426|gb|AFS75477.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407064174|gb|AFS85221.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408071870|gb|EKH06201.1| succinate dehydrogenase [Escherichia coli PA7]
gi|408075607|gb|EKH09839.1| succinate dehydrogenase [Escherichia coli FRIK920]
gi|408085724|gb|EKH19304.1| succinate dehydrogenase [Escherichia coli PA34]
gi|408089517|gb|EKH22822.1| succinate dehydrogenase [Escherichia coli FDA506]
gi|408094913|gb|EKH27908.1| succinate dehydrogenase [Escherichia coli FDA507]
gi|408101828|gb|EKH34255.1| succinate dehydrogenase [Escherichia coli FDA504]
gi|408109669|gb|EKH41547.1| succinate dehydrogenase [Escherichia coli FRIK1999]
gi|408116295|gb|EKH47604.1| succinate dehydrogenase [Escherichia coli FRIK1997]
gi|408121741|gb|EKH52647.1| succinate dehydrogenase [Escherichia coli NE1487]
gi|408129921|gb|EKH60118.1| succinate dehydrogenase [Escherichia coli NE037]
gi|408131856|gb|EKH61873.1| succinate dehydrogenase [Escherichia coli FRIK2001]
gi|408140776|gb|EKH70263.1| succinate dehydrogenase [Escherichia coli PA4]
gi|408150015|gb|EKH78634.1| succinate dehydrogenase [Escherichia coli PA23]
gi|408152176|gb|EKH80618.1| succinate dehydrogenase [Escherichia coli PA49]
gi|408157427|gb|EKH85579.1| succinate dehydrogenase [Escherichia coli PA45]
gi|408166488|gb|EKH94056.1| succinate dehydrogenase [Escherichia coli TT12B]
gi|408171773|gb|EKH98873.1| succinate dehydrogenase [Escherichia coli MA6]
gi|408173940|gb|EKI00938.1| succinate dehydrogenase [Escherichia coli 5905]
gi|408186608|gb|EKI12636.1| succinate dehydrogenase [Escherichia coli CB7326]
gi|408191169|gb|EKI16786.1| succinate dehydrogenase [Escherichia coli EC96038]
gi|408191453|gb|EKI17059.1| succinate dehydrogenase [Escherichia coli 5412]
gi|408206660|gb|EKI31438.1| succinate dehydrogenase [Escherichia coli ARS4.2123]
gi|408221298|gb|EKI45252.1| succinate dehydrogenase [Escherichia coli 07798]
gi|408231479|gb|EKI54747.1| succinate dehydrogenase [Escherichia coli N1]
gi|408232556|gb|EKI55747.1| succinate dehydrogenase [Escherichia coli PA38]
gi|408238569|gb|EKI61362.1| succinate dehydrogenase [Escherichia coli EC1735]
gi|408248794|gb|EKI70787.1| succinate dehydrogenase [Escherichia coli EC1736]
gi|408252541|gb|EKI74184.1| succinate dehydrogenase [Escherichia coli EC1737]
gi|408258884|gb|EKI80105.1| succinate dehydrogenase [Escherichia coli EC1846]
gi|408268116|gb|EKI88521.1| succinate dehydrogenase [Escherichia coli EC1847]
gi|408269357|gb|EKI89603.1| succinate dehydrogenase [Escherichia coli EC1848]
gi|408278631|gb|EKI98334.1| succinate dehydrogenase [Escherichia coli EC1849]
gi|408284820|gb|EKJ03888.1| succinate dehydrogenase [Escherichia coli EC1850]
gi|408287223|gb|EKJ06103.1| succinate dehydrogenase [Escherichia coli EC1856]
gi|408300179|gb|EKJ17906.1| succinate dehydrogenase [Escherichia coli EC1862]
gi|408300417|gb|EKJ18117.1| succinate dehydrogenase [Escherichia coli EC1864]
gi|408316856|gb|EKJ33110.1| succinate dehydrogenase [Escherichia coli EC1868]
gi|408317436|gb|EKJ33672.1| succinate dehydrogenase [Escherichia coli EC1866]
gi|408331108|gb|EKJ46309.1| succinate dehydrogenase [Escherichia coli EC1869]
gi|408336245|gb|EKJ51042.1| succinate dehydrogenase [Escherichia coli NE098]
gi|408337844|gb|EKJ52527.1| succinate dehydrogenase [Escherichia coli EC1870]
gi|408347214|gb|EKJ61444.1| succinate dehydrogenase [Escherichia coli 0.1288]
gi|408350275|gb|EKJ64158.1| succinate dehydrogenase [Escherichia coli FRIK523]
gi|408352860|gb|EKJ66390.1| succinate dehydrogenase [Escherichia coli 0.1304]
gi|408457292|gb|EKJ81090.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli AD30]
gi|408558259|gb|EKK34643.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
5.2239]
gi|408558649|gb|EKK35009.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.4870]
gi|408559791|gb|EKK36091.1| succinate dehydrogenase [Escherichia coli 6.0172]
gi|408584935|gb|EKK59850.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.0586]
gi|408589466|gb|EKK63978.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.2524]
gi|408591258|gb|EKK65701.1| succinate dehydrogenase [Escherichia coli 10.0833]
gi|408603819|gb|EKK77435.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
10.0869]
gi|408605296|gb|EKK78812.1| succinate dehydrogenase [Escherichia coli 8.0416]
gi|408609273|gb|EKK82655.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
88.0221]
gi|408616674|gb|EKK89819.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
10.0821]
gi|412961968|emb|CCK45881.1| succinate dehydrogenase, iron sulfur protein [Escherichia coli
chi7122]
gi|412968555|emb|CCJ43180.1| succinate dehydrogenase, iron sulfur protein [Escherichia coli]
gi|421940317|gb|EKT97791.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|427214146|gb|EKV83496.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
88.1042]
gi|427216237|gb|EKV85371.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
89.0511]
gi|427216477|gb|EKV85596.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
88.1467]
gi|427233433|gb|EKW01183.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
90.2281]
gi|427233530|gb|EKW01268.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
90.0039]
gi|427235695|gb|EKW03309.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
90.0091]
gi|427251017|gb|EKW17621.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
93.0056]
gi|427252446|gb|EKW18931.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
93.0055]
gi|427253744|gb|EKW20138.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
94.0618]
gi|427269903|gb|EKW34810.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.0943]
gi|427270039|gb|EKW34937.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.0183]
gi|427275083|gb|EKW39712.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.1288]
gi|427286018|gb|EKW49908.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0428]
gi|427291644|gb|EKW55038.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0427]
gi|427293230|gb|EKW56491.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0939]
gi|427304440|gb|EKW67085.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0003]
gi|427305943|gb|EKW68504.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0932]
gi|427310141|gb|EKW72405.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0107]
gi|427321038|gb|EKW82750.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.1742]
gi|427321816|gb|EKW83482.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0007]
gi|427333687|gb|EKW94783.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0713]
gi|427333782|gb|EKW94870.1| succinate dehydrogenase [Escherichia coli 99.0678]
gi|427336557|gb|EKW97518.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0672]
gi|429259735|gb|EKY43386.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
96.0109]
gi|429261600|gb|EKY45012.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
97.0010]
gi|429350520|gb|EKY87250.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429351935|gb|EKY88654.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429352541|gb|EKY89255.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429367176|gb|EKZ03777.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429368087|gb|EKZ04679.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429369824|gb|EKZ06398.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429381869|gb|EKZ18344.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429385202|gb|EKZ21656.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429385725|gb|EKZ22178.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429397418|gb|EKZ33765.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429397998|gb|EKZ34342.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429398371|gb|EKZ34713.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429409147|gb|EKZ45377.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429417607|gb|EKZ53754.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421275|gb|EKZ57396.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429423016|gb|EKZ59124.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429427017|gb|EKZ63102.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434505|gb|EKZ70531.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429439488|gb|EKZ75471.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429443758|gb|EKZ79706.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429450536|gb|EKZ86431.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429455850|gb|EKZ91698.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430879826|gb|ELC03157.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE4]
gi|430888388|gb|ELC11107.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE10]
gi|430890006|gb|ELC12653.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE5]
gi|430900941|gb|ELC22955.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE12]
gi|430909631|gb|ELC30997.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE16]
gi|430911464|gb|ELC32750.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE15]
gi|430917585|gb|ELC38629.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE25]
gi|430932461|gb|ELC52884.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE28]
gi|430937974|gb|ELC58226.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE39]
gi|430947277|gb|ELC66984.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE178]
gi|430956401|gb|ELC75077.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE187]
gi|430966886|gb|ELC84249.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE188]
gi|430969282|gb|ELC86432.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE189]
gi|430975885|gb|ELC92769.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE191]
gi|430984916|gb|ELD01533.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE201]
gi|430997442|gb|ELD13709.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE205]
gi|431000167|gb|ELD16241.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE206]
gi|431009771|gb|ELD24381.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE210]
gi|431017969|gb|ELD31420.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE212]
gi|431024091|gb|ELD37284.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE213]
gi|431028048|gb|ELD41093.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE214]
gi|431031842|gb|ELD44575.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE216]
gi|431042373|gb|ELD52865.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE220]
gi|431044484|gb|ELD54757.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE224]
gi|431054936|gb|ELD64505.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE230]
gi|431077104|gb|ELD84372.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE236]
gi|431084750|gb|ELD90877.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE237]
gi|431086964|gb|ELD92980.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE47]
gi|431094146|gb|ELD99796.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE49]
gi|431103335|gb|ELE08005.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE53]
gi|431108047|gb|ELE12209.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE56]
gi|431111003|gb|ELE14920.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE55]
gi|431119805|gb|ELE22804.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE57]
gi|431123442|gb|ELE26180.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE58]
gi|431133225|gb|ELE35223.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE60]
gi|431133515|gb|ELE35505.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE62]
gi|431140447|gb|ELE42218.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE67]
gi|431143372|gb|ELE45105.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE66]
gi|431151220|gb|ELE52255.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE72]
gi|431156936|gb|ELE57597.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE75]
gi|431162203|gb|ELE62658.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE76]
gi|431183938|gb|ELE83711.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE86]
gi|431193562|gb|ELE92898.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE87]
gi|431194352|gb|ELE93617.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE93]
gi|431213163|gb|ELF11080.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE119]
gi|431218020|gb|ELF15506.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE142]
gi|431224535|gb|ELF21756.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE143]
gi|431236718|gb|ELF31923.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE162]
gi|431246526|gb|ELF40790.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE169]
gi|431251696|gb|ELF45703.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE6]
gi|431259341|gb|ELF51715.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE8]
gi|431266373|gb|ELF57934.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE9]
gi|431268042|gb|ELF59556.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE17]
gi|431275494|gb|ELF66523.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE18]
gi|431286600|gb|ELF77426.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE23]
gi|431294940|gb|ELF85117.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE43]
gi|431299353|gb|ELF88925.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE29]
gi|431305079|gb|ELF93595.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE22]
gi|431312938|gb|ELG00922.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE48]
gi|431317909|gb|ELG05679.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE50]
gi|431330208|gb|ELG17490.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE59]
gi|431332282|gb|ELG19525.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE63]
gi|431341526|gb|ELG28533.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE65]
gi|431341782|gb|ELG28779.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE78]
gi|431345222|gb|ELG32148.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE79]
gi|431350910|gb|ELG37713.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE84]
gi|431356948|gb|ELG43634.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE101]
gi|431356989|gb|ELG43673.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE91]
gi|431367265|gb|ELG53749.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE115]
gi|431370991|gb|ELG56784.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE118]
gi|431374400|gb|ELG59992.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE123]
gi|431379729|gb|ELG64654.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE135]
gi|431387730|gb|ELG71552.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE136]
gi|431391530|gb|ELG75170.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE140]
gi|431397478|gb|ELG80934.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE141]
gi|431401768|gb|ELG85102.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE144]
gi|431404649|gb|ELG87897.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE147]
gi|431413265|gb|ELG96057.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE154]
gi|431424437|gb|ELH06533.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE165]
gi|431429587|gb|ELH11515.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE192]
gi|431436593|gb|ELH18108.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE194]
gi|431446747|gb|ELH27491.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE173]
gi|431448651|gb|ELH29366.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE175]
gi|431453730|gb|ELH34114.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE183]
gi|431455979|gb|ELH36329.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE184]
gi|431462551|gb|ELH42762.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE196]
gi|431474018|gb|ELH53841.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE203]
gi|431478316|gb|ELH58065.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE202]
gi|431482492|gb|ELH62195.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE209]
gi|431485981|gb|ELH65638.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE207]
gi|431494194|gb|ELH73784.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE211]
gi|431498021|gb|ELH77237.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE217]
gi|431506103|gb|ELH84707.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE215]
gi|431509460|gb|ELH87711.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE218]
gi|431514446|gb|ELH92288.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE223]
gi|431517518|gb|ELH95040.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE227]
gi|431519618|gb|ELH97070.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE229]
gi|431535174|gb|ELI11557.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE104]
gi|431540047|gb|ELI15679.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE106]
gi|431545781|gb|ELI20428.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE109]
gi|431554980|gb|ELI28844.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE113]
gi|431559567|gb|ELI33115.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE117]
gi|431574010|gb|ELI46799.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE124]
gi|431587361|gb|ELI58738.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE125]
gi|431592869|gb|ELI63438.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE129]
gi|431600610|gb|ELI70278.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE131]
gi|431605449|gb|ELI74838.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE133]
gi|431609373|gb|ELI78698.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE137]
gi|431613980|gb|ELI83146.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE138]
gi|431619137|gb|ELI88062.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE139]
gi|431622363|gb|ELI91144.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE145]
gi|431630941|gb|ELI99265.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE150]
gi|431634131|gb|ELJ02387.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE148]
gi|431637114|gb|ELJ05233.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE153]
gi|431648505|gb|ELJ15901.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE157]
gi|431649586|gb|ELJ16933.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE160]
gi|431651024|gb|ELJ18329.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE163]
gi|431662137|gb|ELJ28922.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE166]
gi|431665261|gb|ELJ31988.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE167]
gi|431665704|gb|ELJ32418.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE168]
gi|431677013|gb|ELJ43096.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE174]
gi|431678202|gb|ELJ44210.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE176]
gi|431691192|gb|ELJ56652.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE179]
gi|431693531|gb|ELJ58944.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE180]
gi|431695778|gb|ELJ61072.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE232]
gi|431708950|gb|ELJ73452.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE88]
gi|431711354|gb|ELJ75707.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE85]
gi|431720625|gb|ELJ84651.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE90]
gi|431725160|gb|ELJ89070.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE94]
gi|431725538|gb|ELJ89387.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE95]
gi|431732657|gb|ELJ96108.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE97]
gi|431736247|gb|ELJ99589.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE99]
gi|432348111|gb|ELL42563.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli J96]
gi|441651819|emb|CCQ02764.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441712250|emb|CCQ07715.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
Nissle 1917]
gi|443421256|gb|AGC86160.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli APEC
O78]
gi|444542084|gb|ELV21481.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0814]
gi|444550157|gb|ELV28284.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
09BKT078844]
gi|444551486|gb|ELV29419.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0815]
gi|444564420|gb|ELV41359.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0839]
gi|444566707|gb|ELV43512.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0816]
gi|444570822|gb|ELV47334.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0848]
gi|444581872|gb|ELV57703.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1753]
gi|444584745|gb|ELV60362.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1775]
gi|444585682|gb|ELV61230.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1793]
gi|444599179|gb|ELV74070.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli ATCC
700728]
gi|444599616|gb|ELV74482.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA11]
gi|444607800|gb|ELV82363.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1805]
gi|444613961|gb|ELV88204.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA13]
gi|444614075|gb|ELV88315.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA19]
gi|444622550|gb|ELV96501.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA2]
gi|444623947|gb|ELV97856.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA48]
gi|444631996|gb|ELW05574.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA47]
gi|444636690|gb|ELW10080.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA8]
gi|444647061|gb|ELW20045.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
7.1982]
gi|444649548|gb|ELW22430.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1781]
gi|444653055|gb|ELW25790.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.1762]
gi|444662088|gb|ELW34356.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli PA35]
gi|444666407|gb|ELW38478.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.4880]
gi|444672314|gb|ELW44044.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
95.0083]
gi|444674195|gb|ELW45759.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
99.0670]
gi|449322168|gb|EMD12168.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli O08]
gi|449324471|gb|EMD14403.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
SEPT362]
Length = 238
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|419945313|ref|ZP_14461759.1| succinate dehydrogenase iron-sulfur subunit, partial [Escherichia
coli HM605]
gi|388415868|gb|EIL75776.1| succinate dehydrogenase iron-sulfur subunit, partial [Escherichia
coli HM605]
Length = 234
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|156934783|ref|YP_001438699.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
ATCC BAA-894]
gi|389841705|ref|YP_006343789.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
ES15]
gi|417792100|ref|ZP_12439502.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
E899]
gi|424798664|ref|ZP_18224206.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter sakazakii
696]
gi|429107923|ref|ZP_19169792.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
malonaticus 681]
gi|429109501|ref|ZP_19171271.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
malonaticus 507]
gi|429114635|ref|ZP_19175553.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter sakazakii
701]
gi|429121951|ref|ZP_19182555.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter sakazakii
680]
gi|449308995|ref|YP_007441351.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
SP291]
gi|156533037|gb|ABU77863.1| hypothetical protein ESA_02623 [Cronobacter sakazakii ATCC BAA-894]
gi|333953810|gb|EGL71710.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
E899]
gi|387852181|gb|AFK00279.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
ES15]
gi|423234385|emb|CCK06076.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter sakazakii
696]
gi|426294646|emb|CCJ95905.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
malonaticus 681]
gi|426310658|emb|CCJ97384.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter
malonaticus 507]
gi|426317764|emb|CCK01666.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter sakazakii
701]
gi|426323510|emb|CCK13292.1| Succinate dehydrogenase iron-sulfur protein [Cronobacter sakazakii
680]
gi|449099028|gb|AGE87062.1| succinate dehydrogenase iron-sulfur subunit [Cronobacter sakazakii
SP291]
Length = 238
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 134/230 (58%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEQEEGRDMMLLDALMLLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK-----------IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETNARLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 12 EMDPTLTFRRSCREGICGSCAMNIGGVNTLACI---SKIDANDKVSKIYPLPHMYVVKDL 68
E DP+L+FRRSCREG+CGS +N+ G N LACI S + A + I PLP + V++DL
Sbjct: 44 EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDL 103
Query: 69 VPDMNNFYAQYKSIQRHL 86
V DM FYAQY+ I+ +L
Sbjct: 104 VVDMGQFYAQYEKIKPYL 121
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 305 GLVKKDKPGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL + + A + I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPVSSLGAGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
>gi|253990449|ref|YP_003041805.1| succinate dehydrogenase iron-sulfur protein [Photorhabdus
asymbiotica]
gi|211638984|emb|CAR67599.1| succinate dehydrogenase iron-sulfur protein (ec 1.3.99.1)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781899|emb|CAQ85063.1| succinate dehydrogenase iron-sulfur protein [Photorhabdus
asymbiotica]
Length = 238
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + V++DLV DM FYAQY+ I+P+L D +N ++LQS R+KLDGLYECI
Sbjct: 91 IRPLPGLPVIRDLVVDMGQFYAQYEKIRPYLLNDGKNPPAREHLQSPAQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDNLNDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI IK +L
Sbjct: 211 NCVSVCPKGLNPTKAIGHIKSML 233
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DPTL+FRRSCREG+CGS +N+ G N LACI+ + A + K I
Sbjct: 34 MLLDALIQLK-EQDPTLSFRRSCREGVCGSDGLNMNGKNGLACITPVSALRRGRKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIRPYL 121
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 254 DSRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDK 311
+ RD D L QLK DP +R R+C +G+ GL K
Sbjct: 29 EGRDMMLLDALIQLKEQDPTLSFR--------RSCREGVCGS----------DGLNMNGK 70
Query: 312 PGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL A + + A + K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 71 NGL--ACITPVSALRRGRKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIRPYL 121
>gi|16128699|ref|NP_415252.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12
substr. MG1655]
gi|170080391|ref|YP_001729711.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli str.
K-12 substr. DH10B]
gi|218704041|ref|YP_002411560.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
UMN026]
gi|238899989|ref|YP_002925785.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
BW2952]
gi|293403968|ref|ZP_06647962.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
FVEC1412]
gi|298379744|ref|ZP_06989349.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
FVEC1302]
gi|300900719|ref|ZP_07118868.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
198-1]
gi|300947197|ref|ZP_07161407.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
116-1]
gi|300957670|ref|ZP_07169860.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
175-1]
gi|301027096|ref|ZP_07190468.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
196-1]
gi|301648027|ref|ZP_07247794.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
146-1]
gi|331641225|ref|ZP_08342360.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H736]
gi|386279738|ref|ZP_10057415.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
4_1_40B]
gi|386596433|ref|YP_006092833.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli DH1]
gi|386703895|ref|YP_006167742.1| Succinate dehydrogenase iron-sulfur subunit [Escherichia coli P12b]
gi|387606202|ref|YP_006095058.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 042]
gi|387620457|ref|YP_006128084.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli DH1]
gi|388476816|ref|YP_489004.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12
substr. W3110]
gi|415779815|ref|ZP_11490386.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3431]
gi|417263910|ref|ZP_12051306.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2.3916]
gi|417274922|ref|ZP_12062262.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2.4168]
gi|417275322|ref|ZP_12062659.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.2303]
gi|417289961|ref|ZP_12077244.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B41]
gi|417585516|ref|ZP_12236293.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_C165-02]
gi|417611760|ref|ZP_12262232.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_EH250]
gi|417617161|ref|ZP_12267591.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
G58-1]
gi|417633328|ref|ZP_12283547.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_S1191]
gi|417945016|ref|ZP_12588253.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
XH140A]
gi|417978284|ref|ZP_12619054.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
XH001]
gi|418301576|ref|ZP_12913370.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
UMNF18]
gi|418958985|ref|ZP_13510891.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli J53]
gi|419141245|ref|ZP_13685999.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC6A]
gi|419147960|ref|ZP_13692642.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC6B]
gi|419152603|ref|ZP_13697187.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC6C]
gi|419158049|ref|ZP_13702567.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC6D]
gi|419162964|ref|ZP_13707441.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC6E]
gi|419813070|ref|ZP_14337927.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O32:H37 str. P4]
gi|419936419|ref|ZP_14453433.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
576-1]
gi|419941116|ref|ZP_14457821.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 75]
gi|422769920|ref|ZP_16823611.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli E482]
gi|422791503|ref|ZP_16844206.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli TA007]
gi|422816699|ref|ZP_16864914.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M919]
gi|423701471|ref|ZP_17675930.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H730]
gi|425114081|ref|ZP_18515904.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.0566]
gi|425120609|ref|ZP_18522305.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.0569]
gi|425271428|ref|ZP_18662928.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TW15901]
gi|425282087|ref|ZP_18673198.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TW00353]
gi|432352622|ref|ZP_19595907.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE2]
gi|432390701|ref|ZP_19633560.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE21]
gi|432400859|ref|ZP_19643614.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE26]
gi|432415651|ref|ZP_19658277.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE44]
gi|432424912|ref|ZP_19667429.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE181]
gi|432459735|ref|ZP_19701893.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE204]
gi|432474772|ref|ZP_19716781.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE208]
gi|432521409|ref|ZP_19758566.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE228]
gi|432536721|ref|ZP_19773640.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE235]
gi|432562598|ref|ZP_19799222.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE51]
gi|432626270|ref|ZP_19862252.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE77]
gi|432630337|ref|ZP_19866282.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE80]
gi|432636003|ref|ZP_19871886.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE81]
gi|432639880|ref|ZP_19875721.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE83]
gi|432659957|ref|ZP_19895608.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE111]
gi|432664948|ref|ZP_19900535.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE116]
gi|432684534|ref|ZP_19919847.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE156]
gi|432690622|ref|ZP_19925862.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE161]
gi|432703263|ref|ZP_19938385.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE171]
gi|432736231|ref|ZP_19971002.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE42]
gi|432773893|ref|ZP_20008180.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE54]
gi|432859771|ref|ZP_20085523.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE146]
gi|432884987|ref|ZP_20099667.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE158]
gi|432910992|ref|ZP_20117556.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE190]
gi|432953940|ref|ZP_20146116.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE197]
gi|433017691|ref|ZP_20205953.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE105]
gi|433046854|ref|ZP_20234269.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE120]
gi|433052029|ref|ZP_20239259.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE122]
gi|433066965|ref|ZP_20253793.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE128]
gi|433157688|ref|ZP_20342557.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE177]
gi|433177198|ref|ZP_20361650.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE82]
gi|442592314|ref|ZP_21010292.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|450240377|ref|ZP_21899317.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli S17]
gi|118615|sp|P07014.1|DHSB_ECOLI RecName: Full=Succinate dehydrogenase iron-sulfur subunit
gi|28948819|pdb|1NEK|B Chain B, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Ubiquinone Bound
gi|28948823|pdb|1NEN|B Chain B, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Dinitrophenol-17 Inhibitor Co-Crystallized At The
Ubiquinone Binding Site
gi|85544085|pdb|2ACZ|B Chain B, Complex Ii (Succinate Dehydrogenase) From E. Coli With
Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone
Binding Site
gi|256599501|pdb|2WDQ|B Chain B, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599505|pdb|2WDQ|F Chain F, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599509|pdb|2WDQ|J Chain J, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Carboxin Bound
gi|256599513|pdb|2WDV|B Chain B, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|256599517|pdb|2WDV|F Chain F, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|256599521|pdb|2WDV|J Chain J, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An
Empty Quinone-Binding Pocket
gi|259045634|pdb|2WDR|B Chain B, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|259045638|pdb|2WDR|F Chain F, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|259045642|pdb|2WDR|J Chain J, E. Coli Succinate:quinone Oxidoreductase (Sqr) With
Pentachlorophenol Bound
gi|304445613|pdb|2WS3|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445617|pdb|2WS3|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445621|pdb|2WS3|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant
gi|304445629|pdb|2WU2|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445633|pdb|2WU2|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445637|pdb|2WU2|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
gi|304445641|pdb|2WU5|B Chain B, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|304445645|pdb|2WU5|F Chain F, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|304445649|pdb|2WU5|J Chain J, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhd His71met Mutant
gi|42928|emb|CAA25534.1| unnamed protein product [Escherichia coli]
gi|146200|gb|AAA23896.1| succinate dehydrogenase small subunit [Escherichia coli K-12]
gi|1651320|dbj|BAA35391.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K12
substr. W3110]
gi|1786943|gb|AAC73818.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12
substr. MG1655]
gi|169888226|gb|ACB01933.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12
substr. DH10B]
gi|218431138|emb|CAR12014.1| succinate dehydrogenase, FeS subunit [Escherichia coli UMN026]
gi|238863586|gb|ACR65584.1| succinate dehydrogenase, FeS subunit [Escherichia coli BW2952]
gi|260450122|gb|ACX40544.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli DH1]
gi|284920502|emb|CBG33564.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli 042]
gi|291428554|gb|EFF01579.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
FVEC1412]
gi|298279442|gb|EFI20950.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
FVEC1302]
gi|299879430|gb|EFI87641.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
196-1]
gi|300315615|gb|EFJ65399.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
175-1]
gi|300355778|gb|EFJ71648.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
198-1]
gi|300453183|gb|EFK16803.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
116-1]
gi|301073853|gb|EFK88659.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli MS
146-1]
gi|315135380|dbj|BAJ42539.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli DH1]
gi|315614598|gb|EFU95240.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 3431]
gi|323942946|gb|EGB39110.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli E482]
gi|323972009|gb|EGB67229.1| succinate dehydrogenase and fumarate reductase iron-sulfur protein
[Escherichia coli TA007]
gi|331038023|gb|EGI10243.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H736]
gi|339413674|gb|AEJ55346.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
UMNF18]
gi|342363190|gb|EGU27300.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
XH140A]
gi|344192070|gb|EGV46170.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
XH001]
gi|345341033|gb|EGW73449.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_C165-02]
gi|345365109|gb|EGW97218.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_EH250]
gi|345380333|gb|EGX12232.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
G58-1]
gi|345390042|gb|EGX19841.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
STEC_S1191]
gi|359331423|dbj|BAL37870.1| succinate dehydrogenase, FeS subunit [Escherichia coli str. K-12
substr. MDS42]
gi|377998064|gb|EHV61161.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC6B]
gi|377998860|gb|EHV61947.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC6A]
gi|378002838|gb|EHV65887.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC6C]
gi|378012513|gb|EHV75442.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
DEC6D]
gi|378016106|gb|EHV78994.1| succinate dehydrogenase iron-sulfur protein [Escherichia coli
DEC6E]
gi|383102063|gb|AFG39572.1| Succinate dehydrogenase iron-sulfur subunit [Escherichia coli P12b]
gi|384378241|gb|EIE36126.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli J53]
gi|385154072|gb|EIF16091.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
O32:H37 str. P4]
gi|385539787|gb|EIF86617.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli M919]
gi|385712426|gb|EIG49378.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli H730]
gi|386123155|gb|EIG71755.1| succinate dehydrogenase iron-sulfur subunit [Escherichia sp.
4_1_40B]
gi|386222467|gb|EII44894.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2.3916]
gi|386233350|gb|EII65335.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
2.4168]
gi|386241975|gb|EII78888.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
3.2303]
gi|386255999|gb|EIJ05687.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli B41]
gi|388401331|gb|EIL61985.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
576-1]
gi|388401545|gb|EIL62185.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli 75]
gi|408197714|gb|EKI22966.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TW15901]
gi|408205558|gb|EKI30418.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
TW00353]
gi|408568654|gb|EKK44680.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.0569]
gi|408572280|gb|EKK48200.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
8.0566]
gi|430878339|gb|ELC01769.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli KTE2]
gi|430921979|gb|ELC42800.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE21]
gi|430928626|gb|ELC49174.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE26]
gi|430943228|gb|ELC63353.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE44]
gi|430958821|gb|ELC77398.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE181]
gi|430991687|gb|ELD08090.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE204]
gi|431009177|gb|ELD23801.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE208]
gi|431044763|gb|ELD55022.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE228]
gi|431073038|gb|ELD80775.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE235]
gi|431098744|gb|ELE04056.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE51]
gi|431164982|gb|ELE65362.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE77]
gi|431173374|gb|ELE73453.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE81]
gi|431173920|gb|ELE73990.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE80]
gi|431184836|gb|ELE84582.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE83]
gi|431202308|gb|ELF01001.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE111]
gi|431203689|gb|ELF02282.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE116]
gi|431224443|gb|ELF21668.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE156]
gi|431229361|gb|ELF26011.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE161]
gi|431246590|gb|ELF40849.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE171]
gi|431285771|gb|ELF76606.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE42]
gi|431320443|gb|ELG08085.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE54]
gi|431407732|gb|ELG90938.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE146]
gi|431419466|gb|ELH01816.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE158]
gi|431444341|gb|ELH25364.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE190]
gi|431469882|gb|ELH49808.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE197]
gi|431536566|gb|ELI12735.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE105]
gi|431571327|gb|ELI44216.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE120]
gi|431575226|gb|ELI47973.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE122]
gi|431590085|gb|ELI61193.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE128]
gi|431681440|gb|ELJ47229.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE177]
gi|431709463|gb|ELJ73926.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli
KTE82]
gi|441607973|emb|CCP95739.1| Succinate dehydrogenase iron-sulfur protein [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|449324540|gb|EMD14469.1| succinate dehydrogenase iron-sulfur subunit [Escherichia coli S17]
Length = 238
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 136/230 (59%), Gaps = 52/230 (22%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVD------------------------------------- 147
F+IYR+NPD D+ P MQ+Y ++
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSD 63
Query: 148 ---LNNK--------IDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+N K I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123
Query: 194 DKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWII 253
+ +N ++LQ + R+KLDGLYECILCACCSTSCPS+WWN +K++GPA L+ AYR++I
Sbjct: 124 NGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLI 183
Query: 254 DSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
DSRD +T RL+ L D FSV+RCH+IMNC CPKGLNP RAI IK +L
Sbjct: 184 DSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSML 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 26/122 (21%)
Query: 246 MQAYRWIID-SRDEKTADRLNQLK--DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
MQ Y D RD D L QLK DP +R R+C +G+
Sbjct: 20 MQDYTLEADEGRDMMLLDALIQLKEKDPSLSFR--------RSCREGVCGS--------- 62
Query: 303 LSGLVKKDKPGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQP 359
GL K GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P
Sbjct: 63 -DGLNMNGKNGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKP 119
Query: 360 WL 361
+L
Sbjct: 120 YL 121
>gi|304415181|ref|ZP_07395896.1| succinate dehydrogenase FeS subunit [Candidatus Regiella
insecticola LSR1]
gi|304282963|gb|EFL91411.1| succinate dehydrogenase FeS subunit [Candidatus Regiella
insecticola LSR1]
Length = 238
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 108/143 (75%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + VV+DLV DM FY QY+ I+P+L D +N +YLQS + R KLDGLYECI
Sbjct: 91 IRPLPGLPVVRDLVVDMAQFYTQYEKIKPYLLNDGKNPPAREYLQSPEQRAKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FS +RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETESRLDDLDDAFSAFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLAC---ISKIDANDKVSKIY 57
M+LDALI++K E DPTL FRRSCREG+CGS +N+ G + +D + I
Sbjct: 34 MLLDALIQLK-EKDPTLAFRRSCREGVCGSDGLNMNGKKWPRLHYPLINLDKKRQKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + VV+DLV DM FY QY+ I+ +L
Sbjct: 93 PLPGLPVVRDLVVDMAQFYTQYEKIKPYL 121
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 331 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
I PLP + VV+DLV DM FY QY+ I+P+L
Sbjct: 91 IRPLPGLPVVRDLVVDMAQFYTQYEKIKPYL 121
>gi|110776988|ref|XP_001122922.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur
subunit, mitochondrial-like, partial [Apis mellifera]
Length = 252
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 128/219 (58%), Gaps = 51/219 (23%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN------------------------------- 149
+ +T +YRWNP+KP+ KP MQ++ VDLN
Sbjct: 34 RLQTIRVYRWNPEKPNVKPYMQQFSVDLNKCTGTMVLDVLALIKAEYDPTLSYRKSCREG 93
Query: 150 ------------------NKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 191
K + K IYPLPH YV++DLV D+ + QYK+I+P+L
Sbjct: 94 ICGCCAMNINGVNNLACITKALESSKPIVIYPLPHSYVIRDLVTDLEQYLKQYKNIEPFL 153
Query: 192 QRDKEN--IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAY 249
+R E+ +G Q LQS DR KL+GLYECILC CC+ +CP YWW G+K+LGP+ L+QAY
Sbjct: 154 KRTGEDNYVGLRQILQSPRDRDKLNGLYECILCGCCTFACPPYWWLGDKFLGPSTLLQAY 213
Query: 250 RWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPK 288
RWIIDSRD +RL +L+D +SVYRCHTI NCT+TCPK
Sbjct: 214 RWIIDSRDMGHKERLTKLRDYYSVYRCHTIFNCTKTCPK 252
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 63/86 (73%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLD L IK E DPTL++R+SCREGICG CAMNI GVN LACI+K + K IYPLP
Sbjct: 68 MVLDVLALIKAEYDPTLSYRKSCREGICGCCAMNINGVNNLACITKALESSKPIVIYPLP 127
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
H YV++DLV D+ + QYK+I+ L
Sbjct: 128 HSYVIRDLVTDLEQYLKQYKNIEPFL 153
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 315 DTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
+ A + K + K IYPLPH YV++DLV D+ + QYK+I+P+L R+
Sbjct: 107 NLACITKALESSKPIVIYPLPHSYVIRDLVTDLEQYLKQYKNIEPFLKRT 156
>gi|125563469|gb|EAZ08849.1| hypothetical protein OsI_31111 [Oryza sativa Indica Group]
Length = 311
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 128/231 (55%), Gaps = 51/231 (22%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN----------KIDA------------------ 154
K F +YRW+PD P +P +Q Y VDL KI A
Sbjct: 75 KEFRVYRWSPDAPSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICG 134
Query: 155 ---------------------NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR 193
+ + PLPHMYVV+DLV D+ +FY QYKS++PWL+R
Sbjct: 135 SCSMCIDGVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKR 194
Query: 194 DKENIGNAQ-YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWI 252
+ + QS ++RK+LDGLYECILCACCS +CPSYWWN E +LGPA L+ AYRW+
Sbjct: 195 KTKTKTETTEHAQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWV 254
Query: 253 IDSRDEKTADRLNQLKDPF-SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
DSRDE A+R+ L + + +YRC I +CT TCPK L+P AI+ +K L
Sbjct: 255 SDSRDEYAAERVQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMKTL 305
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 6/91 (6%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L KIK E D TL FRRSCREGICGSC+M I GVNT+AC+ +D + + + PL
Sbjct: 106 MVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCIDGVNTVACLRPVDTDTSSATTVTPL 165
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLV D+ +FY QYKS++ PW
Sbjct: 166 PHMYVVRDLVVDLTSFYQQYKSVE-----PW 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 313 GLDTAA-LHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +D + + + PLPHMYVV+DLV D+ +FY QYKS++PWL R
Sbjct: 142 GVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKR 194
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,851,695,320
Number of Sequences: 23463169
Number of extensions: 241658035
Number of successful extensions: 621546
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3325
Number of HSP's successfully gapped in prelim test: 899
Number of HSP's that attempted gapping in prelim test: 602549
Number of HSP's gapped (non-prelim): 12718
length of query: 365
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 221
effective length of database: 8,980,499,031
effective search space: 1984690285851
effective search space used: 1984690285851
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)