Query psy5769
Match_columns 365
No_of_seqs 364 out of 2494
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 17:32:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vr8_B Iron-sulfur subunit of 100.0 5.1E-54 1.8E-58 412.3 16.3 210 1-314 67-277 (282)
2 2h88_B Succinate dehydrogenase 100.0 1.2E-46 4E-51 355.7 16.0 202 1-306 43-245 (252)
3 2bs2_B Quinol-fumarate reducta 100.0 9E-45 3.1E-49 340.0 14.5 201 1-306 35-238 (241)
4 2wdq_B Succinate dehydrogenase 100.0 7.3E-42 2.5E-46 319.5 17.0 202 1-306 34-236 (238)
5 1kf6_B Fumarate reductase iron 100.0 8.4E-40 2.9E-44 306.4 15.2 199 1-306 35-234 (243)
6 3kwl_A Uncharacterized protein 100.0 5.1E-35 1.7E-39 301.7 10.8 125 156-306 94-222 (514)
7 1rm6_C 4-hydroxybenzoyl-COA re 99.7 4.9E-18 1.7E-22 150.3 5.0 45 1-49 23-67 (161)
8 1t3q_A Quinoline 2-oxidoreduct 99.6 2.9E-16 1E-20 139.8 6.1 44 1-49 30-74 (168)
9 3vr8_B Iron-sulfur subunit of 99.5 1.4E-14 5E-19 138.7 5.1 54 97-150 8-63 (282)
10 3i9v_3 NADH-quinone oxidoreduc 99.3 3.1E-13 1.1E-17 145.6 0.0 50 1-51 18-91 (783)
11 3c8y_A Iron hydrogenase 1; dit 99.3 2.9E-12 9.8E-17 133.7 6.7 57 1-58 18-77 (574)
12 1ffv_A CUTS, iron-sulfur prote 99.2 1.2E-11 4.2E-16 109.4 8.5 45 1-49 24-68 (163)
13 1n62_A Carbon monoxide dehydro 99.2 2.8E-11 9.7E-16 107.4 9.2 45 1-49 24-68 (166)
14 3kwl_A Uncharacterized protein 98.8 1.1E-09 3.9E-14 112.7 0.9 57 306-362 73-133 (514)
15 3hrd_D Nicotinate dehydrogenas 98.7 8.2E-09 2.8E-13 90.9 4.8 57 1-61 24-82 (160)
16 2h88_B Succinate dehydrogenase 98.6 3.9E-08 1.3E-12 92.2 5.7 38 326-363 94-131 (252)
17 2bs2_B Quinol-fumarate reducta 98.4 2.6E-07 8.9E-12 85.7 5.5 38 326-363 86-124 (241)
18 1vlb_A Aldehyde oxidoreductase 98.4 1.3E-07 4.6E-12 103.3 3.6 58 1-62 22-82 (907)
19 2w3s_A Xanthine dehydrogenase; 98.3 2.3E-07 7.9E-12 94.4 4.1 56 1-61 22-83 (462)
20 1dgj_A Aldehyde oxidoreductase 98.3 5.2E-07 1.8E-11 98.7 5.0 58 1-62 22-82 (907)
21 1frr_A Ferredoxin I; electron 98.1 2.4E-06 8.3E-11 67.8 4.6 45 1-51 22-84 (95)
22 3cf4_A Acetyl-COA decarboxylas 98.1 7.1E-07 2.4E-11 96.4 0.9 73 215-306 413-485 (807)
23 1frd_A Heterocyst [2Fe-2S] fer 98.0 3E-06 1E-10 67.8 4.3 45 1-51 25-87 (98)
24 1awd_A Ferredoxin; electron tr 98.0 4.5E-06 1.5E-10 66.4 4.2 45 1-51 21-83 (94)
25 1iue_A Ferredoxin; electron tr 98.0 5.7E-06 2E-10 66.4 4.3 45 1-51 23-85 (98)
26 1a70_A Ferredoxin; iron-sulfur 98.0 5.7E-06 2E-10 66.2 4.3 45 1-51 23-85 (97)
27 3i9v_9 NADH-quinone oxidoreduc 97.9 5.5E-07 1.9E-11 79.0 -2.6 104 167-290 4-112 (182)
28 1czp_A Ferredoxin I; [2Fe-2S] 97.9 8.8E-06 3E-10 65.2 4.3 45 1-51 25-87 (98)
29 1jq4_A Methane monooxygenase c 97.8 1E-05 3.6E-10 64.7 3.9 45 1-51 26-90 (98)
30 3nvw_A Xanthine dehydrogenase/ 97.8 1.3E-05 4.3E-10 70.8 3.9 56 1-60 24-91 (164)
31 2wdq_B Succinate dehydrogenase 97.7 4.5E-05 1.5E-09 70.3 6.1 36 328-363 88-123 (238)
32 1wri_A Ferredoxin II, ferredox 97.6 3.6E-05 1.2E-09 61.0 4.1 43 1-50 22-82 (93)
33 1jb0_C Photosystem I iron-sulf 97.5 9.5E-06 3.2E-10 61.4 -1.2 55 216-290 7-61 (80)
34 1kf6_B Fumarate reductase iron 97.4 0.00016 5.6E-09 66.7 6.3 36 328-363 87-122 (243)
35 1xer_A Ferredoxin; electron tr 97.3 1.4E-05 4.8E-10 63.7 -2.3 56 215-289 41-96 (103)
36 1l5p_A Ferredoxin; [2Fe-2S] cl 97.3 0.00013 4.5E-09 57.8 3.4 45 1-51 21-86 (93)
37 1doi_A 2Fe-2S ferredoxin; halo 97.3 0.00017 5.8E-09 60.9 4.1 44 1-50 47-109 (128)
38 2fdn_A Ferredoxin; electron tr 97.3 7.7E-05 2.6E-09 52.6 1.6 47 216-290 5-51 (55)
39 1krh_A Benzoate 1,2-dioxygenas 97.2 0.00021 7E-09 68.7 4.0 49 1-56 25-95 (338)
40 2wlb_A ETP1-FD, electron trans 97.1 0.00025 8.4E-09 57.1 3.5 45 1-51 25-95 (103)
41 1rgv_A Ferredoxin; electron tr 97.0 0.00025 8.7E-09 53.9 2.6 46 216-289 5-56 (80)
42 2fgo_A Ferredoxin; allochromat 97.0 0.00027 9.3E-09 54.0 2.4 46 216-289 5-56 (82)
43 2zvs_A Uncharacterized ferredo 97.0 0.00018 6.3E-09 55.4 1.3 45 216-288 5-55 (85)
44 7fd1_A FD1, protein (7-Fe ferr 96.9 0.00014 4.7E-09 58.5 -0.0 47 216-290 5-53 (106)
45 3ah7_A [2Fe-2S]ferredoxin; [2F 96.9 0.00079 2.7E-08 55.0 4.5 45 1-51 26-96 (113)
46 1rof_A Ferredoxin; electron tr 96.9 0.00037 1.3E-08 49.2 2.2 49 215-289 6-54 (60)
47 1bc6_A 7-Fe ferredoxin; electr 96.8 0.00032 1.1E-08 52.9 1.5 46 216-289 5-52 (77)
48 1dwl_A Ferredoxin I; electron 96.8 0.00079 2.7E-08 47.3 3.3 50 215-289 5-54 (59)
49 1b9r_A Protein (terpredoxin); 96.8 0.00076 2.6E-08 54.3 3.5 44 1-50 22-93 (105)
50 3eun_A Ferredoxin; electron tr 96.8 0.00019 6.6E-09 55.0 -0.1 48 215-290 4-57 (82)
51 1hfe_L Protein (Fe-only hydrog 96.8 0.00041 1.4E-08 69.5 2.3 51 214-290 30-80 (421)
52 1i7h_A Ferredoxin; 2Fe-2S,elec 96.8 0.00085 2.9E-08 54.7 3.8 42 1-48 26-92 (111)
53 1xlq_A Putidaredoxin, PDX; [2F 96.8 0.0012 4.1E-08 53.2 4.4 45 1-51 22-94 (106)
54 1f2g_A Ferredoxin II; electron 96.7 0.00028 9.5E-09 49.9 0.3 48 217-289 6-53 (58)
55 3lxf_A Ferredoxin; iron, iron- 96.6 0.0017 5.7E-08 52.6 4.3 30 1-36 22-53 (104)
56 2y5c_A Adrenodoxin-like protei 96.5 0.0016 5.5E-08 52.8 3.6 44 1-50 27-96 (109)
57 1uwm_A Ferredoxin VI, FDVI; el 96.4 0.0015 5.3E-08 52.6 3.0 45 1-51 22-94 (106)
58 1h98_A Ferredoxin; electron tr 96.4 0.00034 1.2E-08 53.0 -1.0 46 216-289 5-52 (78)
59 2bt6_A Adrenodoxin 1; rutheniu 96.4 0.0017 5.9E-08 52.5 3.2 46 1-50 28-99 (108)
60 1dax_A Ferredoxin I; electron 96.4 0.00052 1.8E-08 49.6 -0.2 51 215-289 7-57 (64)
61 2v2k_A Ferredoxin; iron, trans 96.3 0.00058 2E-08 54.5 -0.0 47 216-290 5-53 (105)
62 3hui_A Ferredoxin; cytochrome 96.3 0.0025 8.6E-08 53.6 3.8 45 1-51 43-114 (126)
63 2c42_A Pyruvate-ferredoxin oxi 96.2 0.00059 2E-08 76.8 -1.1 21 214-234 683-703 (1231)
64 1jnr_B Adenylylsulfate reducta 96.1 0.0011 3.8E-08 57.1 0.6 50 215-289 6-60 (150)
65 3gyx_B Adenylylsulfate reducta 96.0 0.00099 3.4E-08 58.4 -0.2 51 215-290 5-60 (166)
66 1iqz_A Ferredoxin; iron-sulfer 96.0 0.0011 3.9E-08 50.3 0.1 17 215-231 7-23 (81)
67 1sj1_A Ferredoxin; thermostabi 95.7 0.00093 3.2E-08 48.1 -1.6 17 215-231 7-23 (66)
68 1ti6_B Pyrogallol hydroxytrans 95.1 0.0045 1.5E-07 58.6 0.6 47 215-291 95-154 (274)
69 2ivf_B Ethylbenzene dehydrogen 95.1 0.0034 1.2E-07 61.6 -0.3 19 272-290 207-234 (352)
70 2pia_A Phthalate dioxygenase r 95.1 0.013 4.3E-07 55.9 3.6 34 1-40 256-290 (321)
71 1q16_B Respiratory nitrate red 95.0 0.0038 1.3E-07 64.1 -0.2 19 272-290 240-267 (512)
72 2ivf_B Ethylbenzene dehydrogen 94.9 0.0018 6.3E-08 63.5 -2.7 52 214-291 146-199 (352)
73 1kqf_B FDH-N beta S, formate d 94.8 0.0045 1.5E-07 59.0 -0.4 46 215-290 129-183 (294)
74 3n9z_C Adrenodoxin; cytochrome 94.6 0.0097 3.3E-07 49.7 1.4 44 1-50 27-98 (123)
75 3zyy_X Iron-sulfur cluster bin 94.5 0.026 8.7E-07 59.4 4.6 45 1-51 22-85 (631)
76 2vpz_B NRFC protein; oxidoredu 94.5 0.008 2.7E-07 53.9 0.5 45 215-290 86-139 (195)
77 1gte_A Dihydropyrimidine dehyd 94.4 0.0051 1.7E-07 68.0 -1.1 18 214-231 948-965 (1025)
78 2vpz_B NRFC protein; oxidoredu 94.3 0.0055 1.9E-07 54.9 -1.0 50 215-291 54-105 (195)
79 1kqf_B FDH-N beta S, formate d 93.4 0.0074 2.5E-07 57.5 -2.0 49 216-291 97-148 (294)
80 1q16_B Respiratory nitrate red 93.3 0.0071 2.4E-07 62.1 -2.3 52 214-291 179-232 (512)
81 1ti6_B Pyrogallol hydroxytrans 92.9 0.021 7.1E-07 54.0 0.3 48 216-291 65-114 (274)
82 3unc_A Xanthine dehydrogenase/ 92.3 0.075 2.6E-06 60.4 3.8 57 1-61 25-93 (1332)
83 1h0h_B Formate dehydrogenase ( 91.9 0.021 7.3E-07 51.8 -1.0 60 215-304 104-178 (214)
84 1y56_A Hypothetical protein PH 90.8 0.13 4.4E-06 51.8 3.4 50 1-53 32-85 (493)
85 1h0h_B Formate dehydrogenase ( 90.1 0.018 6.2E-07 52.3 -3.3 19 273-291 105-125 (214)
86 3mm5_B Sulfite reductase, diss 87.5 0.033 1.1E-06 54.7 -3.7 17 273-289 238-254 (366)
87 2gmh_A Electron transfer flavo 86.8 0.13 4.6E-06 53.0 0.2 53 215-290 508-567 (584)
88 2fgo_A Ferredoxin; allochromat 83.7 0.36 1.2E-05 36.1 1.3 17 274-290 6-22 (82)
89 2fdn_A Ferredoxin; electron tr 83.6 0.38 1.3E-05 33.0 1.3 17 274-290 6-22 (55)
90 1rgv_A Ferredoxin; electron tr 83.4 0.36 1.2E-05 35.9 1.2 18 273-290 5-22 (80)
91 3eun_A Ferredoxin; electron tr 83.1 0.4 1.4E-05 36.0 1.3 17 274-290 6-22 (82)
92 1jb0_C Photosystem I iron-sulf 82.2 0.32 1.1E-05 35.8 0.4 19 216-234 44-62 (80)
93 1rof_A Ferredoxin; electron tr 81.9 0.44 1.5E-05 32.8 1.0 18 273-290 7-24 (60)
94 2pa8_D DNA-directed RNA polyme 81.6 0.23 7.9E-06 46.4 -0.7 41 220-287 174-214 (265)
95 7fd1_A FD1, protein (7-Fe ferr 80.9 0.51 1.8E-05 37.2 1.3 19 216-234 36-54 (106)
96 1xer_A Ferredoxin; electron tr 80.1 0.41 1.4E-05 37.2 0.4 19 215-233 79-97 (103)
97 3mm5_A Sulfite reductase, diss 79.9 0.17 5.9E-06 50.6 -2.3 18 273-290 283-300 (418)
98 1f2g_A Ferredoxin II; electron 79.4 0.33 1.1E-05 33.5 -0.3 17 274-290 6-22 (58)
99 1dax_A Ferredoxin I; electron 79.3 0.39 1.3E-05 33.9 0.0 16 274-290 9-24 (64)
100 2v2k_A Ferredoxin; iron, trans 79.0 0.66 2.2E-05 36.3 1.3 19 216-234 36-54 (105)
101 2zvs_A Uncharacterized ferredo 78.9 1.1 3.9E-05 33.6 2.6 19 216-234 34-59 (85)
102 1h98_A Ferredoxin; electron tr 78.8 0.47 1.6E-05 35.2 0.4 19 216-234 36-54 (78)
103 3i9v_9 NADH-quinone oxidoreduc 77.8 0.61 2.1E-05 39.9 0.9 19 272-290 49-67 (182)
104 1iqz_A Ferredoxin; iron-sulfer 76.7 0.52 1.8E-05 35.2 0.1 16 273-288 8-23 (81)
105 1dwl_A Ferredoxin I; electron 73.7 1 3.5E-05 30.7 1.0 15 274-288 7-21 (59)
106 1jnr_B Adenylylsulfate reducta 71.4 0.96 3.3E-05 38.4 0.4 19 216-234 44-62 (150)
107 2gag_A Heterotetrameric sarcos 70.6 3.7 0.00013 44.9 4.9 52 1-53 39-104 (965)
108 1bc6_A 7-Fe ferredoxin; electr 69.3 1.6 5.3E-05 32.1 1.2 17 274-290 6-24 (77)
109 3gyx_B Adenylylsulfate reducta 69.2 1.2 4E-05 38.6 0.5 19 216-234 43-61 (166)
110 1sj1_A Ferredoxin; thermostabi 69.1 0.91 3.1E-05 31.8 -0.2 16 273-288 8-23 (66)
111 3i9v_1 NADH-quinone oxidoreduc 67.2 1.5 5E-05 44.1 0.8 74 214-304 348-422 (438)
112 2vdc_G Glutamate synthase [NAD 65.8 0.78 2.7E-05 45.8 -1.5 21 213-233 16-38 (456)
113 2vdc_G Glutamate synthase [NAD 65.4 2.6 8.9E-05 42.0 2.2 30 272-301 18-49 (456)
114 1hfe_L Protein (Fe-only hydrog 64.9 2.2 7.4E-05 42.4 1.5 20 215-234 62-81 (421)
115 3zyv_A AOH1; oxidoreductase, m 61.5 5 0.00017 45.6 3.8 40 21-60 45-96 (1335)
116 3or1_B Sulfite reductase beta; 61.3 2.1 7.1E-05 42.1 0.6 19 215-233 254-272 (386)
117 3mm5_B Sulfite reductase, diss 58.9 2.3 7.8E-05 41.4 0.4 20 214-233 236-255 (366)
118 3cf4_A Acetyl-COA decarboxylas 57.3 3.8 0.00013 44.2 1.8 25 273-297 414-438 (807)
119 2gmh_A Electron transfer flavo 52.0 3.5 0.00012 42.3 0.4 21 214-234 548-568 (584)
120 3mm5_A Sulfite reductase, diss 51.9 3.3 0.00011 41.3 0.2 20 215-234 282-301 (418)
121 2c42_A Pyruvate-ferredoxin oxi 50.8 3.5 0.00012 46.5 0.3 17 215-231 740-756 (1231)
122 3or1_B Sulfite reductase beta; 50.2 3.4 0.00012 40.5 0.1 17 273-289 255-271 (386)
123 1gte_A Dihydropyrimidine dehyd 49.1 16 0.00054 40.2 5.1 29 273-301 76-106 (1025)
124 3c8y_A Iron hydrogenase 1; dit 48.9 3.8 0.00013 42.3 0.1 20 215-234 186-205 (574)
125 3or1_A Sulfite reductase alpha 45.9 4.8 0.00017 40.3 0.4 21 214-234 298-318 (437)
126 3i9v_3 NADH-quinone oxidoreduc 38.6 6.1 0.00021 42.2 -0.2 18 218-235 219-236 (783)
127 3or1_A Sulfite reductase alpha 35.4 7.2 0.00025 39.1 -0.3 18 273-290 300-317 (437)
128 3j16_B RLI1P; ribosome recycli 30.8 7.1 0.00024 40.6 -1.3 21 213-233 49-69 (608)
129 2l52_A Methanosarcina acetivor 28.9 80 0.0027 24.3 4.9 50 1-51 29-88 (99)
130 2q5w_D Molybdopterin convertin 28.5 48 0.0017 23.9 3.4 40 1-51 27-66 (77)
131 3bk7_A ABC transporter ATP-bin 25.0 15 0.00052 38.0 0.0 17 216-232 66-82 (607)
132 2pa8_D DNA-directed RNA polyme 24.4 15 0.00052 33.9 -0.2 17 215-231 199-215 (265)
133 3rpf_C Molybdopterin convertin 24.3 1E+02 0.0036 22.1 4.6 42 1-51 22-63 (74)
134 3j16_B RLI1P; ribosome recycli 23.2 18 0.0006 37.6 0.1 17 273-289 52-68 (608)
No 1
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=100.00 E-value=5.1e-54 Score=412.27 Aligned_cols=210 Identities=72% Similarity=1.297 Sum_probs=189.5
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccccccccccccCCccccccccccchhhHHHHhh
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 80 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~~~~~~~~p~~~~~~~~dl~~~~~~~~~~~~ 80 (365)
||||||++|++++||+|+|+.+|+.|+||+|+|+|||++++||.|++.+..
T Consensus 67 tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~InG~~~laC~t~v~~~~----------------------------- 117 (282)
T 3vr8_B 67 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGENTLACICNIDQNT----------------------------- 117 (282)
T ss_pred cHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEECCEEecchhhhHhHhc-----------------------------
Confidence 699999999988999999999999999999999999999999999996421
Q ss_pred hhhhccCCCcccccccccchhhhhhhhhhhccCCCCCcccccchhhccccCCCCCCCCcchhhhhhhccccccCCCCcEE
Q psy5769 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSK 160 (365)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
++.+|
T Consensus 118 ---------------------------------------------------------------------------~~~~t 122 (282)
T 3vr8_B 118 ---------------------------------------------------------------------------SKTTK 122 (282)
T ss_pred ---------------------------------------------------------------------------CCcEE
Confidence 35789
Q ss_pred EeecCCCCccccccccchHHHHHHHhhCCccccCcCC-CCcccccCCHHHHHhcccchhcccCCcccccCCCceeCCccc
Q psy5769 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKEN-IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239 (365)
Q Consensus 161 IePL~~fpVIkDLvVD~~~ff~klk~vkp~l~~~~~~-~~~~~~~~~~e~~~~l~~~~~CI~CG~C~s~CP~~~~~~~~~ 239 (365)
||||+|||||||||||++.||+++++++||+..+.+. .+..+++|+++++++++++..||+||+|+++||++..++++|
T Consensus 123 IepL~~~pVikDLvvD~~~f~~~~~~v~p~l~~~~~~~~~~~~~~qs~~~~~~~~~~~~CI~CG~C~~aCP~~~~~~~~~ 202 (282)
T 3vr8_B 123 IYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSASCPSYWWNADKY 202 (282)
T ss_pred eccCCCCceeeccccccHHHHHHHHHHhhhcCCCCCCCCCchhcccCHHHHHHHHhhhhCcccCcCcccCCceeccCCcC
Confidence 9999999999999999999999999999999887643 456678999999999999999999999999999998777789
Q ss_pred CCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCChHHHHHHHHHHHhcccccCCCCc
Q psy5769 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGL 314 (365)
Q Consensus 240 lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~~~~~P~~ 314 (365)
+||+++++++|++.|+++....++++.+.+..++|.|++||+|+++||++|++.++|..+|+.++++..+..|+.
T Consensus 203 lGP~~li~a~r~~~d~rd~~~~erl~~l~~~~~l~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~~k~~~~~ 277 (282)
T 3vr8_B 203 LGPAVLMQAYRWIIDSRDDSAAERLARMQDGFSAFKCHTIMNCTKTCPKHLNPARAIGEIKMLLTKMKTKPAPLP 277 (282)
T ss_pred CCHHHHHHHHHHHhCCcccchHHHHHHHhhcCCcccChhhCCccccCcCCCCHHHHHHHHHHHHHHhccCCCCcc
Confidence 999999999999999998766777776656679999999999999999999999999999999987655555544
No 2
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=100.00 E-value=1.2e-46 Score=355.74 Aligned_cols=202 Identities=79% Similarity=1.415 Sum_probs=178.6
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccccccccccccCCccccccccccchhhHHHHhh
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 80 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~~~~~~~~p~~~~~~~~dl~~~~~~~~~~~~ 80 (365)
||||||++|+.++||+|+|+++|+.|+||+|+|+|||+++|||.|++.++.
T Consensus 43 tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~~~~~~----------------------------- 93 (252)
T 2h88_B 43 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDL----------------------------- 93 (252)
T ss_dssp BHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETTEEEEGGGSBCCCCT-----------------------------
T ss_pred hHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECCcEEccccCCHhHcC-----------------------------
Confidence 799999999988899999999999999999999999999999999997642
Q ss_pred hhhhccCCCcccccccccchhhhhhhhhhhccCCCCCcccccchhhccccCCCCCCCCcchhhhhhhccccccCCCCcEE
Q psy5769 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSK 160 (365)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
++.++
T Consensus 94 ---------------------------------------------------------------------------g~~~~ 98 (252)
T 2h88_B 94 ---------------------------------------------------------------------------SKTTK 98 (252)
T ss_dssp ---------------------------------------------------------------------------TSCEE
T ss_pred ---------------------------------------------------------------------------CCceE
Confidence 34689
Q ss_pred EeecCCCCccccccccchHHHHHHHhhCCccccCcCC-CCcccccCCHHHHHhcccchhcccCCcccccCCCceeCCccc
Q psy5769 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKEN-IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239 (365)
Q Consensus 161 IePL~~fpVIkDLvVD~~~ff~klk~vkp~l~~~~~~-~~~~~~~~~~e~~~~l~~~~~CI~CG~C~s~CP~~~~~~~~~ 239 (365)
||||+|||||||||||++.||+++++++||+...... .+..+.++++++++.+.+...||+||.|+++||++..+++.|
T Consensus 99 iepl~~~pvikDLvvD~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~Ci~CG~C~~~CP~~~~~~~~~ 178 (252)
T 2h88_B 99 IYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKY 178 (252)
T ss_dssp EECSTTCBEEETTEECCHHHHHHHHHTCCSCCCSCCTTTTSSCCCCCHHHHHTTTTTTTCCCCCTTGGGCHHHHHHTTTC
T ss_pred EecccCCCccccceeccHHHHHHhhhccCccccCCCCCCccccccCCHHHHHHhHhHHhchhhCcchhhCCCCccCCCCc
Confidence 9999999999999999999999999999999876532 233457799999999999999999999999999987655578
Q ss_pred CCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCChHHHHHHHHHHHhcc
Q psy5769 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306 (365)
Q Consensus 240 lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 306 (365)
+||+++++++++..++++....+++..+.+..++|.|++||+|+++||++|++.++|..+|+.+.+.
T Consensus 179 lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~~~~~C~~Cg~C~~~CP~~i~~~~~i~~lr~~~~~~ 245 (252)
T 2h88_B 179 LGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATY 245 (252)
T ss_dssp CHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhhCCcccchHHHHHHHhcccCCCcCccccchhhhcCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999998888876555666655445689999999999999999999999999999998764
No 3
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=100.00 E-value=9e-45 Score=339.98 Aligned_cols=201 Identities=29% Similarity=0.580 Sum_probs=174.5
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccccccccccccCCccccccccccchhhHHHHhh
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 80 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~~~~~~~~p~~~~~~~~dl~~~~~~~~~~~~ 80 (365)
||||||++|++++||+|+|+++|+.|+||+|+|+|||+++|||.|++.++.
T Consensus 35 tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~~~~~~----------------------------- 85 (241)
T 2bs2_B 35 TIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMINGRPSLACRTLTKDFE----------------------------- 85 (241)
T ss_dssp BHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBGGGCT-----------------------------
T ss_pred hHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEECCCeecchhCcHhHcC-----------------------------
Confidence 799999999988999999999999999999999999999999999997541
Q ss_pred hhhhccCCCcccccccccchhhhhhhhhhhccCCCCCcccccchhhccccCCCCCCCCcchhhhhhhccccccCCCCcEE
Q psy5769 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSK 160 (365)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
+++++
T Consensus 86 ---------------------------------------------------------------------------g~~~~ 90 (241)
T 2bs2_B 86 ---------------------------------------------------------------------------DGVIT 90 (241)
T ss_dssp ---------------------------------------------------------------------------TSEEE
T ss_pred ---------------------------------------------------------------------------CCeEE
Confidence 34689
Q ss_pred EeecCCCCccccccccchHHHHHH-HhhCCccccCcCCCCccccc-CCHHHHHhcccchhcccCCcccccCCCceeCCcc
Q psy5769 161 IYPLPHMYVVKDLVPDMNNFYAQY-KSIQPWLQRDKENIGNAQYL-QSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK 238 (365)
Q Consensus 161 IePL~~fpVIkDLvVD~~~ff~kl-k~vkp~l~~~~~~~~~~~~~-~~~e~~~~l~~~~~CI~CG~C~s~CP~~~~~~~~ 238 (365)
||||++|||||||+||+++||+++ ++++||+.......+....+ +++++.+.+.+...||+||.|+++||++..+. .
T Consensus 91 ie~l~~~pvikDLvvD~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~~~~~-~ 169 (241)
T 2bs2_B 91 LLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAACGTKIMRE-D 169 (241)
T ss_dssp EECCTTSEEEETTEEECHHHHHHHHHHTTCSCCCSSCCCTTSCCCCCCHHHHHHHHHHHTCCCCCHHHHTCHHHHHCT-T
T ss_pred EecCCCCCcceeceeeCHHHHHHHHHHhcCeeccCCCCCCccccccCCHHHHHHhhhhhhhhccCcCcccCCCCccCC-C
Confidence 999999999999999999999999 99999998765322222344 88999988889999999999999999997643 6
Q ss_pred cCCHHHHHHHHHHHhcc-CChhHHHHHhhhcCCCccccccccccccccCcCCCChHHHHHHHHHHHhcc
Q psy5769 239 YLGPAVLMQAYRWIIDS-RDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306 (365)
Q Consensus 239 ~lgP~~l~~~~r~~~d~-rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 306 (365)
|+||+++++++++..++ ++....+++..+.+..++|.|+.||+|+++||++|++.++|..+|+.+++.
T Consensus 170 ~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~~i~~~~~i~~lr~~~~~~ 238 (241)
T 2bs2_B 170 FVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRRKMVSV 238 (241)
T ss_dssp CCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhhCccccccHHHHHHHHhcccCcccCcccChhhHhcCCCCChHHHHHHHHHHHHHh
Confidence 89999999999998887 665555666555445689999999999999999999999999999988753
No 4
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=100.00 E-value=7.3e-42 Score=319.46 Aligned_cols=202 Identities=58% Similarity=1.091 Sum_probs=173.9
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccc-cccccccccCCccccccccccchhhHHHHh
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQY 79 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~-~~~~~~~~p~~~~~~~~dl~~~~~~~~~~~ 79 (365)
||||||++++.+ ||+|+|+.+|++|+||+|+|+|||+++|||.|++.+ +|.
T Consensus 34 tll~~l~~~~~~-~~~l~~~~~C~~g~Cg~C~v~v~G~~~laC~~~~~~~g~~--------------------------- 85 (238)
T 2wdq_B 34 MLLDALIQLKEK-DPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQP--------------------------- 85 (238)
T ss_dssp BHHHHHHHHHHH-CTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBGGGTCCT---------------------------
T ss_pred hHHHHHHHhccc-CCCccccccCCCCCCCCCEEEECCEEEcccccchhhhccC---------------------------
Confidence 799999999976 999999999999999999999999999999999988 550
Q ss_pred hhhhhccCCCcccccccccchhhhhhhhhhhccCCCCCcccccchhhccccCCCCCCCCcchhhhhhhccccccCCCCcE
Q psy5769 80 KSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVS 159 (365)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (365)
++.+
T Consensus 86 ----------------------------------------------------------------------------~~~~ 89 (238)
T 2wdq_B 86 ----------------------------------------------------------------------------GKKI 89 (238)
T ss_dssp ----------------------------------------------------------------------------TSCE
T ss_pred ----------------------------------------------------------------------------CCCE
Confidence 1237
Q ss_pred EEeecCCCCccccccccchHHHHHHHhhCCccccCcCCCCcccccCCHHHHHhcccchhcccCCcccccCCCceeCCccc
Q psy5769 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239 (365)
Q Consensus 160 ~IePL~~fpVIkDLvVD~~~ff~klk~vkp~l~~~~~~~~~~~~~~~~e~~~~l~~~~~CI~CG~C~s~CP~~~~~~~~~ 239 (365)
+||||.|||+|+||+||++.|+++++++.+|+..+....+..++.+++++...+.+...||+||+|+++||.+..+.+.|
T Consensus 90 ~ie~l~~~pvi~dlv~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~~~~~~~~ 169 (238)
T 2wdq_B 90 VIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKF 169 (238)
T ss_dssp EEECCTTSBEEETTEECCHHHHHHHHHTCCSCCCCCSSCCSSSCCCCHHHHHTTTTTTTCCCCCTTGGGCHHHHHCTTTS
T ss_pred EEeeCCCCcchhhceechHHHHHHHHhhcCccccCcCCCCcccccCCHHHHHHHhccccccccCCchhhCcCCccCCCCC
Confidence 99999999999999999999999999999999775532123356788888888999999999999999999987655558
Q ss_pred CCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCChHHHHHHHHHHHhcc
Q psy5769 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306 (365)
Q Consensus 240 lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 306 (365)
+||++++.++++..++++....+++..+....+.|.|+.||+|+++||++|++.++|..+|+.+++.
T Consensus 170 ~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~ 236 (238)
T 2wdq_B 170 IGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR 236 (238)
T ss_dssp CCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCcccchHHHHHHHhccCCCCcCcccchhhhhcCCCCCHHHHHHHHHHHHHhh
Confidence 9999999999988887775544566544444589999999999999999999999999999988753
No 5
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=100.00 E-value=8.4e-40 Score=306.36 Aligned_cols=199 Identities=32% Similarity=0.595 Sum_probs=170.3
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccccccccccccCCccccccccccchhhHHHHhh
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYK 80 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~~~~~~~~p~~~~~~~~dl~~~~~~~~~~~~ 80 (365)
||||||.+++.++||+|+|+++|++|+||+|+|+|||++++||.|++.+++
T Consensus 35 tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G~~~~aC~~~~~~~~----------------------------- 85 (243)
T 1kf6_B 35 SLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYT----------------------------- 85 (243)
T ss_dssp BHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTEEEEGGGCBGGGCT-----------------------------
T ss_pred hHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECCEEEeeeeeEHhhCC-----------------------------
Confidence 799999999987899999999999999999999999999999999997752
Q ss_pred hhhhccCCCcccccccccchhhhhhhhhhhccCCCCCcccccchhhccccCCCCCCCCcchhhhhhhccccccCCCCcEE
Q psy5769 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSK 160 (365)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
+.++
T Consensus 86 ----------------------------------------------------------------------------~~~~ 89 (243)
T 1kf6_B 86 ----------------------------------------------------------------------------DGMK 89 (243)
T ss_dssp ----------------------------------------------------------------------------TCEE
T ss_pred ----------------------------------------------------------------------------CcEE
Confidence 2478
Q ss_pred EeecCCCCccccccccchHHHHHHHhhCCccccCcCCCCccc-ccCCHHHHHhcccchhcccCCcccccCCCceeCCccc
Q psy5769 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQ-YLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKY 239 (365)
Q Consensus 161 IePL~~fpVIkDLvVD~~~ff~klk~vkp~l~~~~~~~~~~~-~~~~~e~~~~l~~~~~CI~CG~C~s~CP~~~~~~~~~ 239 (365)
|+||++|+++|||+||++.|++++..++||+..... .+..+ +.+++++...+.+...||.||.|+++||.+.... .|
T Consensus 90 i~~l~~~~~~kdl~~dl~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~~~~~-~~ 167 (243)
T 1kf6_B 90 VEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR-TADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EF 167 (243)
T ss_dssp EECCTTSCEEETTEECCHHHHHHHHHTCCSCCSCCC-CGGGCCCCCCHHHHHTTGGGGCCCCCCHHHHHCHHHHHCT-TS
T ss_pred EEecCCCCccceeEEecHHHHHHHHhcCCeeccCcC-CCccccccCCHHHHHHhhhhhhccccCccccccCCCcccC-CC
Confidence 999999999999999999999999999999976542 12223 5678888888899999999999999999987544 38
Q ss_pred CCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCChHHHHHHHHHHHhcc
Q psy5769 240 LGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306 (365)
Q Consensus 240 lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 306 (365)
+||+++..++++..++++....+++..+....+.|.|+.||+|+++||+||++.++|..+|+.+.+.
T Consensus 168 ~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~gi~~~~~i~~~r~~~~~~ 234 (243)
T 1kf6_B 168 IGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKD 234 (243)
T ss_dssp CCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhCccccchHHHHHHHhccCCcccCcccCCcchhCCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999988787664333444434344579999999999999999999999999999988754
No 6
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=100.00 E-value=5.1e-35 Score=301.72 Aligned_cols=125 Identities=20% Similarity=0.314 Sum_probs=111.7
Q ss_pred CCcEEEeecCCCCccccccccchHHHHHHHhh---CCccccCcCCCCcccccCCHHHHHhcccchhcccCCcccccCCCc
Q psy5769 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI---QPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSY 232 (365)
Q Consensus 156 ~~~~~IePL~~fpVIkDLvVD~~~ff~klk~v---kp~l~~~~~~~~~~~~~~~~e~~~~l~~~~~CI~CG~C~s~CP~~ 232 (365)
++.|+||||+|||||||||||++.||++++++ +||+. ++++++++.+ | +|+++||++
T Consensus 94 ~~~i~iePl~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~--------------~~~~~~~~~~---~---~C~~aCp~~ 153 (514)
T 3kwl_A 94 SKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYIT--------------KGEKEELEKF---I---QINFINPQT 153 (514)
T ss_dssp CSEEEEECSCSTTEEETTEECHHHHHGGGHHHHHTCTTSC--------------HHHHHGGGGT---G---GGGGTCCCC
T ss_pred CCcEEEEECCCCcccccceeccHHHHHHHHHhhcCCCCCC--------------HHHHHHHhhc---C---hhhccCCCC
Confidence 35799999999999999999999999999999 99984 4677777776 3 999999995
Q ss_pred eeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhh-cCCCccccccccccccccCcCCCChHHHHHHHHHHHhcc
Q psy5769 233 WWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL-KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL 306 (365)
Q Consensus 233 ~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~-~~~~~l~~Ct~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 306 (365)
+ ++|+||+++++++|+..|+||... +|++.+ ....++|.|++| |+++||++|++.+.|..||+.+.+.
T Consensus 154 --~-~~f~Gpa~l~~a~r~~~d~rd~~~-~rl~~l~~~~~gv~~C~~~--C~~~CPk~i~~~~~I~~lr~~~~~~ 222 (514)
T 3kwl_A 154 --N-PKYLGDGFFLYVKWLMKRYPTERD-RLLEMISQPESGVMNFLSV--AHYLYKNDDNIDHEIYELQEILTNS 222 (514)
T ss_dssp --C-TTCCCHHHHHHHHHHHHHCGGGHH-HHHHHTCCTTTSGGGCCCC--GGGBTTCCCHHHHHHHHHHHHHHTS
T ss_pred --C-cccCcHHHHHHHHHHhcCCcchHH-HHHHHhhcCcccccccccc--ccccCCCCCCHHHHHHHHHHHHHHh
Confidence 3 579999999999999999999877 888877 456799999999 9999999999999999999988764
No 7
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=99.70 E-value=4.9e-18 Score=150.33 Aligned_cols=45 Identities=24% Similarity=0.505 Sum_probs=41.0
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA 49 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~ 49 (365)
||||+|+++. +.+.++.+|++|+||+|+|.|||++++||.|++.+
T Consensus 23 tLL~~Lr~~~----gl~g~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~ 67 (161)
T 1rm6_C 23 LLLDYLRETV----GLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQ 67 (161)
T ss_dssp BHHHHHHHTT----CCTTSCCCSSSSSSCTTEEEETTEEEEGGGSBGGG
T ss_pred cHHHHHHHcC----CCcccccCCCCCCCCCCEEEECCcEEechHHHHHH
Confidence 6899998875 45789999999999999999999999999999976
No 8
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=99.62 E-value=2.9e-16 Score=139.78 Aligned_cols=44 Identities=32% Similarity=0.665 Sum_probs=39.0
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCCCCCcCccEEEeCCcccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCREGICGSCAMNIGGVNTLACISKIDA 49 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~~~~CgsC~v~inG~~~laC~t~v~~ 49 (365)
||||+|+... .|. ++.+|++|+||+|.|.|||++++||.|++.+
T Consensus 30 tlL~~Lr~~~-----gl~g~~~~C~~G~CGaC~V~vdG~~v~sC~~~~~~ 74 (168)
T 1t3q_A 30 HLADALREVV-----GLTGTKIGCEQGVCGSCTILIDGAPMRSCLTLAVQ 74 (168)
T ss_dssp BHHHHHHHTT-----CCTTSCCSCSSSSSCTTEEEETTEEEEGGGSBGGG
T ss_pred cHHHHHHhcC-----CCCccccCCCCCCCCCcEEEECCCEeechhhHHHH
Confidence 6899998752 343 8899999999999999999999999999987
No 9
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=99.48 E-value=1.4e-14 Score=138.65 Aligned_cols=54 Identities=31% Similarity=0.643 Sum_probs=42.4
Q ss_pred ccchhhhhhh--hhhhccCCCCCcccccchhhccccCCCCCCCCcchhhhhhhccc
Q psy5769 97 TAKNIRSFQL--SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150 (365)
Q Consensus 97 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (365)
+.++++.++. +++++++.++.+.++..+|+||||+|+.+|++|.+|+|+|++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~R~~p~~~~~~p~~~~~~v~v~~ 63 (282)
T 3vr8_B 8 VCRSLELVTQAARYASAATAAAPTGKRIKTFEIYRFNPEEPGAKPKLQKFDVDLDK 63 (282)
T ss_pred HHHHHHHHHHHHHhhhhccCcccCCCeeEEEEEEEeCCCCCCCCCCcEEEEEEeCC
Confidence 3456664444 44666888888899999999999999988899999999777643
No 10
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=99.28 E-value=3.1e-13 Score=145.62 Aligned_cols=50 Identities=20% Similarity=0.369 Sum_probs=44.4
Q ss_pred CHHHHHHHhhhccCCCcccccC-CCCCCcCccEEEeCC-----------------------cccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRS-CREGICGSCAMNIGG-----------------------VNTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~-C~~~~CgsC~v~inG-----------------------~~~laC~t~v~~~~ 51 (365)
|||+|+.+++. ..|+++|... ++.|.||+|.|+||| ++++||.|+|.++|
T Consensus 18 til~a~~~~gi-~ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~~~~~~~aC~t~v~~gm 91 (783)
T 3i9v_3 18 SVMDAVFHAGY-DVPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVTAVADGM 91 (783)
T ss_dssp BHHHHHHHTTC-CCCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCBCSSCEETTTCBCCSSE
T ss_pred hHHHHHHHhCC-CccccCCCCCCCCCcccCCcEEEecccccccccccccccccccccccCCCcccccCCCCCCCC
Confidence 79999999994 5799999876 588999999999964 67899999999998
No 11
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=99.27 E-value=2.9e-12 Score=133.71 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=50.1
Q ss_pred CHHHHHHHhhhccCCCcccccCC-C-CCCcCccEEEeCCc-cccccccccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSC-R-EGICGSCAMNIGGV-NTLACISKIDANDKVSKIYP 58 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C-~-~~~CgsC~v~inG~-~~laC~t~v~~~~~~~~~~p 58 (365)
|||+||.+++ ..+|+++|+.+| + .|.||+|.|+|||+ +++||.|++.++|...|.+|
T Consensus 18 tiL~a~~~~g-i~ip~lC~~~~~~~~~G~Cg~C~V~v~g~~~~~aC~t~v~~gm~V~T~~~ 77 (574)
T 3c8y_A 18 TILKFARDNN-IDISALCFLNNCNNDINKCEICTVEVEGTGLVTACDTLIEDGMIINTNSD 77 (574)
T ss_dssp BHHHHHHHTT-CCCCCSSCBTTBCCSSSCCCTTEEEETTTEEEEGGGCBCCTTCEEESSCH
T ss_pred HHHHHHHHcC-CCCCcccCCCCCCCCcccCCCCEEEeCCCcccccCCCCcccceeEEecch
Confidence 7999999997 469999999998 6 89999999999999 89999999999985444444
No 12
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=99.25 E-value=1.2e-11 Score=109.39 Aligned_cols=45 Identities=18% Similarity=0.398 Sum_probs=39.7
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA 49 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~ 49 (365)
||||+|+... ....++.+|++|.||+|.|.|||++++||.|++..
T Consensus 24 tLLd~LR~~l----gltg~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~ 68 (163)
T 1ffv_A 24 LLIHFLREEL----NLTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQ 68 (163)
T ss_dssp BHHHHHHHTS----CCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGG
T ss_pred cHHHHHHhcC----CCcccccCCCCCCCCCCEEEECCcEecchHhhHHH
Confidence 6899998752 35678999999999999999999999999999973
No 13
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=99.22 E-value=2.8e-11 Score=107.38 Aligned_cols=45 Identities=13% Similarity=0.417 Sum_probs=39.6
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA 49 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~ 49 (365)
||||+|+... ....++.+|++|.||+|.|.|||++++||.|++..
T Consensus 24 tLLd~LR~~l----gl~g~k~gC~~G~CGaCtV~vdG~~v~SC~~~~~~ 68 (166)
T 1n62_A 24 LLIHFIREQQ----NLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQ 68 (166)
T ss_dssp BHHHHHHHTS----CCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGG
T ss_pred cHHHHHHHcC----CCCccccCCCCCCCCCCEEEECCcEEechhhhHHH
Confidence 6899998753 35678999999999999999999999999999963
No 14
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=98.76 E-value=1.1e-09 Score=112.74 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=46.3
Q ss_pred ccccCCCCcchhhhccc-ccCCccceeccCCCCccccccCcChHHHHHHHHhc---CCccc
Q psy5769 306 LVKKDKPGLDTAALHKI-DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSI---QPWLP 362 (365)
Q Consensus 306 ~~~~~~P~~~~~~L~nI-er~Gn~i~i~PL~~~~viRDL~vd~~~f~~~~~~~---~p~~~ 362 (365)
+++++.|.++.+.+..+ .+.|+.++++||++++++|||+||++.|+++|++| +|||+
T Consensus 73 m~ING~~~la~t~~~~~~~~~~~~i~iePl~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~ 133 (514)
T 3kwl_A 73 LKINQIAVFEDAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYIT 133 (514)
T ss_dssp EEETTEEECSCCBHHHHHHHHCSEEEEECSCSTTEEETTEECHHHHHGGGHHHHHTCTTSC
T ss_pred EEECCEehhhhhhHHHHhhccCCcEEEEECCCCcccccceeccHHHHHHHHHhhcCCCCCC
Confidence 55677776664444444 23367899999999999999999999999999999 99986
No 15
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=98.71 E-value=8.2e-09 Score=90.95 Aligned_cols=57 Identities=19% Similarity=0.383 Sum_probs=47.5
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCccccccccccc--ccccccccccCCc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID--ANDKVSKIYPLPH 61 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~--~~~~~~~~~p~~~ 61 (365)
|+||+|+.. .....++.+|++|.||+|.|.|||++++||.|++. ++.+.+|||+|..
T Consensus 24 tLLd~LR~~----lgltgtk~gC~~G~CGACtV~vdG~~v~sC~~~~~~~~G~~I~TiEgl~~ 82 (160)
T 3hrd_D 24 RLLDLLRED----FGLTSVKEGCSEGECGACTVIFNGDPVTTCCMLAGQADESTIITLEGVAE 82 (160)
T ss_dssp BHHHHHHTT----SCCTTSCCSSSSSSSCTTEEEETTEEEEGGGSBGGGGTTEEEECGGGTSB
T ss_pred CHHHHHHHh----cCCCccccccCCCCCCCCEEEECCEEEEchhhhhhhhCCCceEEeCCCCC
Confidence 578888642 23457899999999999999999999999999997 4566788999874
No 16
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.59 E-value=3.9e-08 Score=92.17 Aligned_cols=38 Identities=76% Similarity=1.366 Sum_probs=35.5
Q ss_pred CccceeccCCCCccccccCcChHHHHHHHHhcCCcccC
Q psy5769 326 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363 (365)
Q Consensus 326 Gn~i~i~PL~~~~viRDL~vd~~~f~~~~~~~~p~~~~ 363 (365)
|..++++||++++++|||+||++.|+++|+.++||+..
T Consensus 94 g~~~~iepl~~~pvikDLvvD~~~~~~~~~~i~~~~~~ 131 (252)
T 2h88_B 94 SKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 131 (252)
T ss_dssp TSCEEEECSTTCBEEETTEECCHHHHHHHHHTCCSCCC
T ss_pred CCceEEecccCCCccccceeccHHHHHHhhhccCcccc
Confidence 55789999999999999999999999999999999964
No 17
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.38 E-value=2.6e-07 Score=85.67 Aligned_cols=38 Identities=29% Similarity=0.678 Sum_probs=35.4
Q ss_pred CccceeccCCCCccccccCcChHHHHHHH-HhcCCcccC
Q psy5769 326 DKVSKIYPLPHMYVVKDLVPDMNNFYAQY-KSIQPWLPR 363 (365)
Q Consensus 326 Gn~i~i~PL~~~~viRDL~vd~~~f~~~~-~~~~p~~~~ 363 (365)
|+.++++||.++++++||.||+.+|++++ ++++||+..
T Consensus 86 g~~~~ie~l~~~pvikDLvvD~~~~~~~~~~~~~~~i~~ 124 (241)
T 2bs2_B 86 DGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHA 124 (241)
T ss_dssp TSEEEEECCTTSEEEETTEEECHHHHHHHHHHTTCSCCC
T ss_pred CCeEEEecCCCCCcceeceeeCHHHHHHHHHHhcCeecc
Confidence 56789999999999999999999999999 999999964
No 18
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=98.36 E-value=1.3e-07 Score=103.33 Aligned_cols=58 Identities=21% Similarity=0.467 Sum_probs=50.2
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCccccccccccccc---ccccccccCCcc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN---DKVSKIYPLPHM 62 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~---~~~~~~~p~~~~ 62 (365)
|+||+|+++. ..+.++.+|++|.||+|.|.|||++++||.+++... .+.+|||||...
T Consensus 22 ~ll~~Lr~~~----~l~g~k~gC~~g~CGaCtv~vdg~~~~sC~~~~~~~~~g~~i~Tiegl~~~ 82 (907)
T 1vlb_A 22 LLSDVLRQQL----GLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTIEGVGQP 82 (907)
T ss_dssp BHHHHHHHTT----CCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECHHHHCBT
T ss_pred hHHHHHHHhc----CCCeecCCCCCCCcCccEEEECCeEeechHhHHHHHcCCCcEEEECCCCCC
Confidence 5899998864 467999999999999999999999999999999654 456899999853
No 19
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=98.33 E-value=2.3e-07 Score=94.37 Aligned_cols=56 Identities=23% Similarity=0.484 Sum_probs=47.7
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe----CCcccccccccccc--cccccccccCCc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI----GGVNTLACISKIDA--NDKVSKIYPLPH 61 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i----nG~~~laC~t~v~~--~~~~~~~~p~~~ 61 (365)
|+||+|+ +..+ ..++.+|++|.||+|.|.| ||++++||.+++.. +.+.+|||||.+
T Consensus 22 ~Ll~~Lr--~~~l---~g~k~gC~~G~CGaCtV~v~~~~~g~~v~sCl~~~~~~~g~~i~TiEgl~~ 83 (462)
T 2w3s_A 22 SLLEWLR--AEGL---TGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAA 83 (462)
T ss_dssp BHHHHHH--HTTC---TTSCCSCSSSSSCTTEEEEEETTEEEEEETTTCBGGGGTTCEEECGGGTSC
T ss_pred cHHHHHH--HcCC---CccCCCCCCCCcCCcEEEEEecCCCeEEEchhhhHHHhCCCcEEEECCCCC
Confidence 6899999 3233 3699999999999999999 99999999999976 445789999974
No 20
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=98.25 E-value=5.2e-07 Score=98.68 Aligned_cols=58 Identities=22% Similarity=0.486 Sum_probs=49.6
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCccccccccccccc---ccccccccCCcc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN---DKVSKIYPLPHM 62 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~---~~~~~~~p~~~~ 62 (365)
|+||+|++. + ....++.+|++|.||+|.|.|||++++||.+++... .+.+|||+|.+.
T Consensus 22 ~ll~~Lr~~---~-~l~g~k~gC~~G~CGaCtv~vdg~~v~sC~~~~~~~~~g~~i~TiEgl~~~ 82 (907)
T 1dgj_A 22 LLVDVLRSQ---L-QLTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIGAP 82 (907)
T ss_dssp BHHHHHHHT---T-CCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECGGGTCBT
T ss_pred cHHHHHHHh---c-CCCccCCCCCCCCcCceEEEECCeEeehhHhHHHHHcCCCcEEEECCCCCC
Confidence 588999875 2 467899999999999999999999999999999654 556899999853
No 21
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.09 E-value=2.4e-06 Score=67.83 Aligned_cols=45 Identities=31% Similarity=0.546 Sum_probs=38.1
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeC-Cc-----------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIG-GV-----------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~in-G~-----------------~~laC~t~v~~~~ 51 (365)
||||||...+ +.+.++|+.|.||+|.|+|. |. .+|||.+.+..++
T Consensus 22 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~~~~~~~ 84 (95)
T 1frr_A 22 TILDAAEEAG------YDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESDL 84 (95)
T ss_dssp CHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSCE
T ss_pred cHHHHHHHcC------CCCCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeECEECCCE
Confidence 6899998875 44678999999999999998 74 5899999997765
No 22
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.05 E-value=7.1e-07 Score=96.41 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=53.2
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCChHH
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGR 294 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~~~~ 294 (365)
+...|+.||.|..+||++. .+..+++ +...++. ..+. ...+.|+.||+|..+||+++++.+
T Consensus 413 ~~~~Ci~CG~C~~~CP~~~-------~~~~il~---~~~~G~~----~~~~-----~~~~~Ci~Cg~C~~vCP~ga~~~~ 473 (807)
T 3cf4_A 413 MVAKCADCGACLLACPEEI-------DIPEAMG---FAKKGDF----SYFE-----EIHDTCIGCRRCEQVCKKEIPILN 473 (807)
T ss_dssp HHHHCCCCCHHHHHCTTCC-------CHHHHHH---HHHTTCT----HHHH-----HHHHHCCCCCHHHHHCTTCCCHHH
T ss_pred hHHhCCCCCchhhhCCCCC-------chHHHHH---HHHcCCh----hhhh-----hchhhccchhhHHHhCCCCCChHH
Confidence 4688999999999999984 2222322 2222211 1111 146899999999999999999999
Q ss_pred HHHHHHHHHhcc
Q psy5769 295 AIAEIKKLLSGL 306 (365)
Q Consensus 295 ~I~~lR~~l~~~ 306 (365)
.+..+|+.+.+.
T Consensus 474 ~i~~~r~~l~~~ 485 (807)
T 3cf4_A 474 VIEKIAQKQIAE 485 (807)
T ss_dssp HHHHHTHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999988753
No 23
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=98.05 E-value=3e-06 Score=67.80 Aligned_cols=45 Identities=27% Similarity=0.505 Sum_probs=38.0
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc-----------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV-----------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~-----------------~~laC~t~v~~~~ 51 (365)
|||||+.+.+ +.+.++|+.|.||+|.|+| +|. .+|||.+.+...+
T Consensus 25 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaC~~~~~~d~ 87 (98)
T 1frd_A 25 TILDGAEENG------IELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCVTYPRSNC 87 (98)
T ss_dssp CHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEEGGGCEESSSE
T ss_pred cHHHHHHHcC------CCcccCCCCCCCCCCEEEEEeCCccccccccCCHHHhhCCcEEEeECEECCCE
Confidence 6899998875 4467899999999999999 786 5899999997654
No 24
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=97.99 E-value=4.5e-06 Score=66.42 Aligned_cols=45 Identities=33% Similarity=0.617 Sum_probs=37.4
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc-----------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV-----------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~-----------------~~laC~t~v~~~~ 51 (365)
||||||.+.+ +.+.++|+.|.||+|.|+| +|. .+|||.+.+...+
T Consensus 21 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~ 83 (94)
T 1awd_A 21 YILDAAEEAG------LDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSDV 83 (94)
T ss_dssp CHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSCE
T ss_pred cHHHHHHHcC------CCCCcCCCCCcCCCCEEEEEeCCcCccccccCCHHHHhCCcEEeeECEECCCE
Confidence 6899998875 4477899999999999998 785 3789999987654
No 25
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=97.95 E-value=5.7e-06 Score=66.37 Aligned_cols=45 Identities=29% Similarity=0.558 Sum_probs=36.9
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCcc-----------------cccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGVN-----------------TLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~~-----------------~laC~t~v~~~~ 51 (365)
||||||...+ +.+.++|+.|.||+|.|+| +|.+ +|||.+.+...+
T Consensus 23 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~ 85 (98)
T 1iue_A 23 YILDASERQN------VELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTCYPKSDC 85 (98)
T ss_dssp CHHHHHHHTT------CCCCCSSCSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSCE
T ss_pred cHHHHHHHcC------CCCCCCCCCCcCCCCEEEEeeCCccccccccCCHHHHhCCeEEEeECEECCCe
Confidence 6899998875 3467899999999999996 8853 799999987653
No 26
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=97.95 E-value=5.7e-06 Score=66.23 Aligned_cols=45 Identities=31% Similarity=0.527 Sum_probs=37.1
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc-----------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV-----------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~-----------------~~laC~t~v~~~~ 51 (365)
|||+||...+ +.+.++|+.|.||+|.|+| +|. .+|||.+.+...+
T Consensus 23 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~ 85 (97)
T 1a70_A 23 YILDAAEEEG------IDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDV 85 (97)
T ss_dssp CHHHHHHHTT------CCCCCSSSSSCSSTTEEEEEESCEECTTCCSSCHHHHHHTEEEGGGCEESSCE
T ss_pred cHHHHHHHcC------CCcccCCCCcCCCCCeEEEccCCcCccccccCCHHHhhCCeEEEeECEECCCE
Confidence 6899998865 4467899999999999998 885 2899999987653
No 27
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=97.92 E-value=5.5e-07 Score=79.03 Aligned_cols=104 Identities=20% Similarity=0.416 Sum_probs=37.5
Q ss_pred CCccccccccchHHHHHHHhhCCccccCcCC----CCcccccCCHHHHHhcccchhcccCCcccccCCCceeCCcc-cCC
Q psy5769 167 MYVVKDLVPDMNNFYAQYKSIQPWLQRDKEN----IGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEK-YLG 241 (365)
Q Consensus 167 fpVIkDLvVD~~~ff~klk~vkp~l~~~~~~----~~~~~~~~~~e~~~~l~~~~~CI~CG~C~s~CP~~~~~~~~-~lg 241 (365)
..++++|.+++..+|.+...+. |-...... .+......+ -.+...||.||.|..+||+....-.. ...
T Consensus 4 ~~~~~~l~~~~~~~~~~~~t~~-yp~~~~~~~~~~~g~~~~~~~------~~d~~~Ci~C~~C~~~CP~~ai~~~~~~~~ 76 (182)
T 3i9v_9 4 KALAQSLGITLKYLFSKPVTVP-YPDAPVALKPRFHGRHVLTRH------PNGLEKCIGCSLCAAACPAYAIYVEPAEND 76 (182)
T ss_dssp -----------------------CCSSCEECCTTCCCSEEECBC------TTSCBSCCCCCHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCcceE-CCCCCCCCCcccCCeEeeccC------CCCCccCcccccchhhCCcccEEeeccccc
Confidence 4588999999999987754432 21111000 010000000 11356899999999999986531100 000
Q ss_pred HHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCC
Q psy5769 242 PAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 242 P~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI 290 (365)
+... . ... .+.... .....+.|+.||+|.++||.+.
T Consensus 77 ~~~~-------~-~~~----~~~~~~-~~~~~~~C~~C~~C~~~CP~~A 112 (182)
T 3i9v_9 77 PENP-------V-SAG----ERYAKV-YEINMLRCIFCGLCEEACPTGA 112 (182)
T ss_dssp SSSC-------S-SSS----SCEEEE-EEEETTTCCCCCHHHHHCSSSC
T ss_pred cccc-------c-ccc----ccccce-eecCCCcCcChhChhhhCCccc
Confidence 0000 0 000 000000 0124678999999999999884
No 28
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=97.89 E-value=8.8e-06 Score=65.19 Aligned_cols=45 Identities=29% Similarity=0.589 Sum_probs=37.2
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc-----------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV-----------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~-----------------~~laC~t~v~~~~ 51 (365)
|||||+.+.+ +.+.++|+.|.||+|.|+| +|. .+|||.+.+...+
T Consensus 25 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~ 87 (98)
T 1czp_A 25 YILDAAEEQG------YDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDV 87 (98)
T ss_dssp CHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSCE
T ss_pred CHHHHHHHcC------CCccCCCCCCCCCCCeEEEccCCcCccccccCCHHHhhCCeEEeeeCEECCCE
Confidence 6899998865 4477899999999999997 785 3799999987654
No 29
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=97.83 E-value=1e-05 Score=64.70 Aligned_cols=45 Identities=27% Similarity=0.455 Sum_probs=36.8
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc-------------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV-------------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~-------------------~~laC~t~v~~~~ 51 (365)
|||+||...+ +.+.++|+.|.||+|.|+| +|. .+|||.+.+...+
T Consensus 26 tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~~~e~~~L~~~~~~~g~~LaCq~~~~~d~ 90 (98)
T 1jq4_A 26 DVITAALRQN------IFLMSSCREGGCATCKALCSEGDYDLKGCSVQALPPEEEEEGLVLLCRTYPKTDL 90 (98)
T ss_dssp THHHHHHHHT------CCCCCSCCSSCCCCCCBCEEECCCCCCCSCTTTSCHHHHHHHCBCTTTCCSSCCS
T ss_pred hHHHHHHHcC------CCCcCCCCCCCCCCCEEEEEcCccccCcccccccCHHHhcCCcEEEeeCEECCCE
Confidence 6899998865 4467899999999999998 785 3789999886543
No 30
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=97.78 E-value=1.3e-05 Score=70.77 Aligned_cols=56 Identities=21% Similarity=0.412 Sum_probs=44.5
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeC----------Ccccccccccccc--cccccccccCC
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIG----------GVNTLACISKIDA--NDKVSKIYPLP 60 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~in----------G~~~laC~t~v~~--~~~~~~~~p~~ 60 (365)
++||+|+.. . .-...+.+|.+|.||+|.|.|| |+++.||.+++.. +.+.+|||.|.
T Consensus 24 ~Ll~~LR~~---l-gltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G~~I~TiEGL~ 91 (164)
T 3nvw_A 24 TLLAYLRRK---L-GLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIG 91 (164)
T ss_dssp BHHHHHHHT---S-CCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGGTC
T ss_pred CHHHHHHHH---c-CCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCCcceEEecccC
Confidence 467776643 2 2456889999999999999999 9999999999964 45567888875
No 31
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=97.68 E-value=4.5e-05 Score=70.28 Aligned_cols=36 Identities=50% Similarity=0.854 Sum_probs=33.2
Q ss_pred cceeccCCCCccccccCcChHHHHHHHHhcCCcccC
Q psy5769 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363 (365)
Q Consensus 328 ~i~i~PL~~~~viRDL~vd~~~f~~~~~~~~p~~~~ 363 (365)
.++++||.++++++||++|...|+++++++.||+..
T Consensus 88 ~~~ie~l~~~pvi~dlv~d~~~~~~~l~~~~~~~~~ 123 (238)
T 2wdq_B 88 KIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLN 123 (238)
T ss_dssp CEEEECCTTSBEEETTEECCHHHHHHHHHTCCSCCC
T ss_pred CEEEeeCCCCcchhhceechHHHHHHHHhhcCcccc
Confidence 488999999999999999999999999999999864
No 32
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.64 E-value=3.6e-05 Score=61.05 Aligned_cols=43 Identities=26% Similarity=0.582 Sum_probs=34.8
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc-----------------cccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV-----------------NTLACISKIDAN 50 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~-----------------~~laC~t~v~~~ 50 (365)
||||||...+ . +.++|+.|.||+|.|+| +|. .+|||.+.+...
T Consensus 22 tlL~a~~~~g-~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~~~~~g~~LaCq~~~~~d 82 (93)
T 1wri_A 22 RLIDIGSEKA-D------LPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESD 82 (93)
T ss_dssp CHHHHHHHHS-C------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSC
T ss_pred cHHHHHHHCc-C------CCCCCCCCCCCCCEEEEecCccCccccccCCHHHHhCCcEEeeeCEECCC
Confidence 6899998875 2 56889999999999998 774 278999888654
No 33
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=97.48 E-value=9.5e-06 Score=61.41 Aligned_cols=55 Identities=22% Similarity=0.506 Sum_probs=34.2
Q ss_pred chhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCC
Q psy5769 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.||.|..+||......+...+. +. ..+........|+.||.|..+||.+.
T Consensus 7 ~~~C~~Cg~C~~~CP~~a~~~~~~~~~-------------~~-------~~~~~~~~~~~C~~Cg~C~~~CP~~a 61 (80)
T 1jb0_C 7 YDTCIGCTQCVRACPTDVLEMVPWDGC-------------KA-------GQIASSPRTEDCVGCKRCETACPTDF 61 (80)
T ss_dssp ETTCCCCCHHHHHCTTCCCEEEECSSS-------------TT-------SEEEECTTGGGCCCCCHHHHHCCSSS
T ss_pred CCcCcChhHHHHHCCcccccccccccc-------------cc-------cccccCCCCCcCcCcCChhhhCCCCc
Confidence 468999999999999764211100010 00 00001124578999999999999873
No 34
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=97.44 E-value=0.00016 Score=66.70 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=33.8
Q ss_pred cceeccCCCCccccccCcChHHHHHHHHhcCCcccC
Q psy5769 328 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363 (365)
Q Consensus 328 ~i~i~PL~~~~viRDL~vd~~~f~~~~~~~~p~~~~ 363 (365)
.+.++|++.++++|||.+|++.|++++..++||+..
T Consensus 87 ~~~i~~l~~~~~~kdl~~dl~~~~~~~~~~~~~~~~ 122 (243)
T 1kf6_B 87 GMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIG 122 (243)
T ss_dssp CEEEECCTTSCEEETTEECCHHHHHHHHHTCCSCCS
T ss_pred cEEEEecCCCCccceeEEecHHHHHHHHhcCCeecc
Confidence 489999999999999999999999999999999864
No 35
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=97.30 E-value=1.4e-05 Score=63.71 Aligned_cols=56 Identities=23% Similarity=0.479 Sum_probs=34.1
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
+...|+.||.|..+||.....-.+..+- ... .... .......|+.||.|..+||.+
T Consensus 41 d~~~C~~Cg~C~~~CP~~ai~~~~~~~~------------~~~------~~~~-~~~~~~~C~~Cg~C~~~CP~~ 96 (103)
T 1xer_A 41 DFDLCIADGSCINACPVNVFQWYDTPGH------------PAS------EKKA-DPVNEQACIFCMACVNVCPVA 96 (103)
T ss_dssp ETTTCCCCCHHHHHCTTCCCEEEECTTC------------SSC------SEEE-ECTTGGGCCCCCHHHHHCTTC
T ss_pred ehhhCCChhhHHHHcCccCeecccccCc------------ccc------ccce-eecCcccccChhhHHHhcccc
Confidence 4478999999999999754211000000 000 0000 012457899999999999987
No 36
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=97.30 E-value=0.00013 Score=57.81 Aligned_cols=45 Identities=22% Similarity=0.519 Sum_probs=34.8
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCC-CCCcCccEEEeC-Cc------------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCR-EGICGSCAMNIG-GV------------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~-~~~CgsC~v~in-G~------------------~~laC~t~v~~~~ 51 (365)
|||+||...+ +. ..++|+ .|.||+|.|+|. |. .+|||.+.+...+
T Consensus 21 tll~a~~~~g------i~gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq~~~~~d~ 86 (93)
T 1l5p_A 21 TLFTVLTEAG------LMSADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACAITLSGEN 86 (93)
T ss_dssp EHHHHHHTTT------SSCCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGGCEECGGG
T ss_pred hHHHHHHHcC------CCcCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeECEECCCC
Confidence 5788887754 33 678999 999999999984 53 2789999887654
No 37
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=97.29 E-value=0.00017 Score=60.94 Aligned_cols=44 Identities=34% Similarity=0.626 Sum_probs=34.8
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCc------------------cccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGV------------------NTLACISKIDAN 50 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~------------------~~laC~t~v~~~ 50 (365)
|||+|+.+.+ +...++|+.|+||+|.|+| .|. .+|||.+.+...
T Consensus 47 tlL~aa~~~G------i~i~~~C~~G~CgtC~v~v~~G~v~~~e~~~L~~~e~~~~g~rLaCq~~~~~d 109 (128)
T 1doi_A 47 YILEAAEAQG------YDWPFSCRAGACANCAAIVLEGDIDMDMQQILSDEEVEDKNVRLTCIGSPDAD 109 (128)
T ss_dssp CHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEEECCCSSSCHHHHHTSCEEEGGGEEECSS
T ss_pred cHHHHHHHcC------CCCccCCCccCCCCCEeEEecCCcCchhhccCCHhHhccCCEEEEEEeEEcCC
Confidence 6899998876 4467899999999999997 562 368998877543
No 38
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=97.28 E-value=7.7e-05 Score=52.57 Aligned_cols=47 Identities=23% Similarity=0.579 Sum_probs=33.0
Q ss_pred chhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCC
Q psy5769 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.||.|..+||......++ + .. . .....|+.||.|..+||.+.
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~--~---------------------~~--~---~~~~~C~~C~~C~~~CP~~a 51 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGD--D---------------------RY--V---IDADTCIDCGACAGVCPVDA 51 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCS--S---------------------SC--E---ECTTTCCCCCHHHHTCTTCC
T ss_pred cccCcChhhHHHHCCccccCcCC--C---------------------EE--E---eccccCcChhChHHHccccc
Confidence 36799999999999986432100 0 00 0 13467999999999999873
No 39
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=97.18 E-value=0.00021 Score=68.69 Aligned_cols=49 Identities=31% Similarity=0.591 Sum_probs=39.1
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCcc---------------------ccccccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGVN---------------------TLACISKIDANDKVSKI 56 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~~---------------------~laC~t~v~~~~~~~~~ 56 (365)
|||||+.+.+ +...++|+.|.||+|.|+| +|.. +|||.+.+.+.+ +|.+
T Consensus 25 tll~a~~~~g------i~i~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~l~~~~~~~g~~LaCq~~~~~~~-~v~~ 95 (338)
T 1krh_A 25 TLSDAAYRQQ------INIPMDCREGECGTCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRPTSDA-VFQI 95 (338)
T ss_dssp CHHHHHHHTT------CCCSCSCSSSSSCTTEEEEEECCEECCGGGSCTTTCCHHHHHHTEEETTTCEESSSE-EEEE
T ss_pred cHHHHHHHcC------CCcccCCCCcCCCCCEEEEecCcEecccCccccccCCHHHHhCCeEEEEeCEECCCe-EEEE
Confidence 6899998876 3467899999999999998 7852 789999997764 3444
No 40
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.14 E-value=0.00025 Score=57.07 Aligned_cols=45 Identities=16% Similarity=0.381 Sum_probs=34.5
Q ss_pred CHHHHHHHhhhccCCCcccccCCC-CCCcCccEEEeCCc-------------------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCR-EGICGSCAMNIGGV-------------------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~-~~~CgsC~v~inG~-------------------------~~laC~t~v~~~~ 51 (365)
|||+||...+ +...++|+ .|.||+|.|+|.+- .+|||.+.+...+
T Consensus 25 tlL~a~~~~g------i~i~~~C~g~G~Cg~C~v~v~~g~~~~~~~~~~~E~~~L~~~~~~~~g~rLaCq~~~~~d~ 95 (103)
T 2wlb_A 25 SILDLAHANN------IDLEGACEGSVACSTCHVIVDPEHYELLDPPEEDEEDMLDLAFGLEETSRLGCQVLLRKDL 95 (103)
T ss_dssp BHHHHHHHTT------CCCCCTTTTSSCCSTTEEEECHHHHHHSCCCCHHHHHHHTTBTTCCTTEEEGGGCBCCGGG
T ss_pred HHHHHHHHcC------CCcCcCCCCCCCcCCCEEEECCCchhccCCCCHHHHHHHhcccCCCCCcEeeEeeEeCCCC
Confidence 6899998864 33568999 79999999998642 2789998886553
No 41
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.05 E-value=0.00025 Score=53.85 Aligned_cols=46 Identities=24% Similarity=0.664 Sum_probs=32.3
Q ss_pred chhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccc------cccccCcCC
Q psy5769 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM------NCTRTCPKG 289 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg------~C~~vCP~g 289 (365)
...|+.||.|..+||.....- . ++ .. . .....|+.|| .|..+||.+
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~----~------------~~-------~~--~---~~~~~C~~C~~~~~~~~C~~~CP~~ 56 (80)
T 1rgv_A 5 NDDCTACDACVEECPNEAITP----G------------DP-------IY--V---IDPTKCSECVGAFDEPQCRLVCPAD 56 (80)
T ss_dssp CSCCCCCCTTTTTCTTCCEEC----C------------SS-------SC--E---ECTTTCCTTTTTCSSCHHHHHCSSC
T ss_pred CCCCcChhhHHHHcChhccCc----C------------CC-------ee--E---EcchhCcCCCCcCCccHHHHhcCcc
Confidence 468999999999999764321 0 00 00 0 1246799999 999999986
No 42
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.01 E-value=0.00027 Score=53.95 Aligned_cols=46 Identities=24% Similarity=0.673 Sum_probs=32.0
Q ss_pred chhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccc------cccccCcCC
Q psy5769 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM------NCTRTCPKG 289 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg------~C~~vCP~g 289 (365)
...|+.||.|..+||.....- . + . .. . .....|+.|| .|..+||.+
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~----~------------~-~------~~--~---~~~~~C~~C~~~~~~~~C~~~CP~~ 56 (82)
T 2fgo_A 5 TDDCINCDVCEPECPNGAISQ----G------------E-E------IY--V---IDPNLCTECVGHYDEPQCQQVCPVD 56 (82)
T ss_dssp CTTCCCCCTTGGGCTTCCEEE----C------------S-S------SE--E---ECTTTCCTTTTTCSSCHHHHHCTTC
T ss_pred CCCCCChhhHHHHCChhccCC----C------------C-C------eE--E---EEchhCccCCCcCCCCHhHhhCCcc
Confidence 468999999999999764310 0 0 0 00 0 1245799999 999999976
No 43
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=96.99 E-value=0.00018 Score=55.44 Aligned_cols=45 Identities=22% Similarity=0.597 Sum_probs=31.8
Q ss_pred chhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccc------cccccCcC
Q psy5769 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM------NCTRTCPK 288 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg------~C~~vCP~ 288 (365)
...|+.||.|..+||.....-+ + + .. . .....|+.|| .|..+||.
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~---~---------------~-----~~--~---~~~~~C~~C~~~~~~~~C~~~CP~ 55 (85)
T 2zvs_A 5 TKKCINCDMCEPECPNEAISMG---D---------------H-----IY--E---INSDKCTECVGHYETPTCQKVCPI 55 (85)
T ss_dssp CTTCCCCCTTTTTCTTCCEECC---S---------------S-----SC--E---ECGGGCCTTTTTCSSCHHHHHCSS
T ss_pred CCcCcChhHHHHHCchhccCcC---C---------------C-----ce--E---EeChhccCCCCcCCccHhhHhCcC
Confidence 4689999999999997643210 0 0 00 0 1246799999 99999998
No 44
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=96.91 E-value=0.00014 Score=58.54 Aligned_cols=47 Identities=28% Similarity=0.618 Sum_probs=32.7
Q ss_pred chhcccCC--cccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCC
Q psy5769 216 LYECILCA--CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 216 ~~~CI~CG--~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.|| .|..+||...... .. + .+ .. ....|+.||.|..+||.+.
T Consensus 5 ~~~C~~C~~~~C~~~CP~~ai~~----~~--------------~-----~~--~i---~~~~C~~Cg~C~~~CP~~a 53 (106)
T 7fd1_A 5 TDNCIKCKYTDCVEVCPVDCFYE----GP--------------N-----FL--VI---HPDECIDCALCEPECPAQA 53 (106)
T ss_dssp CGGGTTTCCCHHHHHCTTCCEEE----CS--------------S-----CE--EE---CTTTCCCCCTTGGGCTTCC
T ss_pred ccccCCccCcHHHHHcCccceEc----CC--------------C-----cE--EE---CcccCCChhhhHHhCCChh
Confidence 47899999 9999999864311 00 0 00 01 2346999999999999874
No 45
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=96.90 E-value=0.00079 Score=55.04 Aligned_cols=45 Identities=16% Similarity=0.397 Sum_probs=34.6
Q ss_pred CHHHHHHHhhhccCCCcccccCCC-CCCcCccEEEeC-Cc-----------------------cccccccccc-ccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCR-EGICGSCAMNIG-GV-----------------------NTLACISKID-AND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~-~~~CgsC~v~in-G~-----------------------~~laC~t~v~-~~~ 51 (365)
|||+|+...+ +...++|+ .|.||+|.|+|. |. .+|||.+.+. +.+
T Consensus 26 tlL~aa~~~G------i~i~~~C~g~G~CgtC~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~~~~~~dl 96 (113)
T 3ah7_A 26 NILELAHDHH------IEMESACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQSRLGCQVFVADEDL 96 (113)
T ss_dssp BHHHHHHHTT------CCCCCTTCSSSSCSTTEEEEEESGGGSCCCCHHHHHHHTTSTTCCTTEEEGGGCBCCSSCE
T ss_pred cHHHHHHHcC------CCCCcCCCCCCCcCCCEEEEcCCcccCCCCCHHHHHhhhcccccCCCcEEeeeCEEeCCCE
Confidence 6899998876 23567898 699999999974 63 2589999997 443
No 46
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=96.90 E-value=0.00037 Score=49.23 Aligned_cols=49 Identities=22% Similarity=0.538 Sum_probs=31.9
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
+...|+.||.|..+||......+ .| . . .+. .....|..||.|..+||.+
T Consensus 6 ~~~~C~~C~~C~~~Cp~~~~~~~--~~--------------~-------~-~~~--~~~~~c~~C~~C~~~CP~~ 54 (60)
T 1rof_A 6 DADACIGCGVCENLCPDVFQLGD--DG--------------K-------A-KVL--QPETDLPCAKDAADSCPTG 54 (60)
T ss_dssp CTTTCCSCCSSTTTCTTTBCCCS--SS--------------C-------C-CBS--CSSCCSTTHHHHHHHCTTC
T ss_pred chhhCCCChHHHHhCcHHHeECC--CC--------------C-------E-eec--CchhhHHHHHHHHHhCCHh
Confidence 34679999999999996321000 00 0 0 011 0245799999999999986
No 47
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=96.85 E-value=0.00032 Score=52.91 Aligned_cols=46 Identities=26% Similarity=0.487 Sum_probs=32.1
Q ss_pred chhccc--CCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 216 LYECIL--CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 216 ~~~CI~--CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
...|+. ||.|..+||..... .. . + .. . .....|+.||.|..+||.+
T Consensus 5 ~~~C~~c~C~~C~~~Cp~~ai~----~~-------------~-~-----~~--~---~~~~~C~~Cg~C~~~CP~~ 52 (77)
T 1bc6_A 5 TEPCIGTKDASCVEVCPVDCIH----EG-------------E-D-----QY--Y---IDPDVCIDCGACEAVCPVS 52 (77)
T ss_dssp CSTTTTCCCCSSTTTCTTCCEE----EC-------------S-S-----SE--E---ECTTTCCSCCSHHHHSGGG
T ss_pred CccCCCCCcchhHHhcccccEE----eC-------------C-C-----cE--E---ECcccCcCccCCHhhcCcc
Confidence 467999 99999999986431 10 0 0 00 0 1245799999999999976
No 48
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=96.80 E-value=0.00079 Score=47.32 Aligned_cols=50 Identities=18% Similarity=0.333 Sum_probs=31.5
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
+...|+.||.|..+||......+ ..| . . .+. .....|+.||.|..+||.+
T Consensus 5 ~~~~C~~C~~C~~~Cp~~~~~~~-~~~--------------~-------~-~~~--~~~~~c~~C~~C~~~CP~~ 54 (59)
T 1dwl_A 5 DHEECIGCESCVELCPEVFAMID-GEE--------------K-------A-MVT--APDSTAECAQDAIDACPVE 54 (59)
T ss_dssp SSCCCSSCCGGGGTSTTTEEEEE-CSS--------------C-------E-EES--CTTCCCGGGGTGGGGSTTC
T ss_pred ChhhCcChhHHHHHCCHHheecC-CCC--------------c-------E-EEe--cChhhhhHHHHHHHhCCHh
Confidence 34679999999999995321000 000 0 0 000 1245799999999999986
No 49
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=96.79 E-value=0.00076 Score=54.35 Aligned_cols=44 Identities=18% Similarity=0.500 Sum_probs=34.0
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCC-CCCcCccEEEeCCc--------------------------cccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCR-EGICGSCAMNIGGV--------------------------NTLACISKIDAN 50 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~-~~~CgsC~v~inG~--------------------------~~laC~t~v~~~ 50 (365)
|||+|+...+ +. ..++|+ .|.||+|.|+|.+- .+|||.+.+...
T Consensus 22 tlL~aa~~~g------i~~i~~~C~g~G~CgtC~v~v~~G~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~~ 93 (105)
T 1b9r_A 22 SLMEVATQNG------VPGIVAECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLSCQVFIDPS 93 (105)
T ss_dssp CTTHHHHHHT------CCCCCCSSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCCTTBSCGGGCCCCTT
T ss_pred hHHHHHHHcC------CCCcCcCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEeeeeCEecCC
Confidence 6889998876 22 568998 69999999997531 368999988764
No 50
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=96.79 E-value=0.00019 Score=54.97 Aligned_cols=48 Identities=27% Similarity=0.623 Sum_probs=33.0
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccc------cccccCcC
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM------NCTRTCPK 288 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg------~C~~vCP~ 288 (365)
+...|+.||.|..+||..... .. + . .. . .....|+.|| .|..+||.
T Consensus 4 ~~~~C~~C~~C~~~CP~~ai~----~~------------~-~------~~--~---i~~~~C~~C~~~~~~~~C~~~CP~ 55 (82)
T 3eun_A 4 ITDECINCDVCEPECPNGAIS----QG------------D-E------TY--V---IEPSLCTECVGHYETSQCVEVCPV 55 (82)
T ss_dssp ECTTCCCCCTTGGGCTTCCEE----EC------------S-S------SE--E---ECGGGCCTTTTTCSSCHHHHHCTT
T ss_pred eCCCCcCccchHHHCChhheE----cC------------C-C------ce--E---EchhhcCCCCCCCCccHHHHhCCc
Confidence 347899999999999986431 10 0 0 00 0 1245799999 99999997
Q ss_pred CC
Q psy5769 289 GL 290 (365)
Q Consensus 289 gI 290 (365)
+.
T Consensus 56 ~A 57 (82)
T 3eun_A 56 DA 57 (82)
T ss_dssp CC
T ss_pred cc
Confidence 73
No 51
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=96.79 E-value=0.00041 Score=69.50 Aligned_cols=51 Identities=27% Similarity=0.591 Sum_probs=34.5
Q ss_pred ccchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCC
Q psy5769 214 DGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI 290 (365)
.+...|+.||.|..+||....... .| .. ..+ .....|+.||.|..+||.+.
T Consensus 30 ~d~~kCi~Cg~C~~~CP~~ai~~~--~~--------------~~-------~~i---~~~~~C~~Cg~C~~~CP~~A 80 (421)
T 1hfe_L 30 IDEAKCIGCDTCSQYCPTAAIFGE--MG--------------EP-------HSI---PHIEACINCGQCLTHCPENA 80 (421)
T ss_dssp ECTTTCCCCCHHHHHCTTCCCBCC--TT--------------SC-------CBC---CCGGGCCCCCTTGGGCTTCC
T ss_pred ECcccCCCccHHHHhcCcCceecc--cc--------------cc-------eee---cChhhCCchhhHHHhhCcCC
Confidence 345789999999999998643210 00 00 000 03567999999999999884
No 52
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=96.78 E-value=0.00085 Score=54.72 Aligned_cols=42 Identities=21% Similarity=0.646 Sum_probs=33.0
Q ss_pred CHHHHHHHhhhccCCCcccccCC-CCCCcCccEEEeC-Cc-----------------------cccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSC-REGICGSCAMNIG-GV-----------------------NTLACISKID 48 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C-~~~~CgsC~v~in-G~-----------------------~~laC~t~v~ 48 (365)
||||||...+ +...++| +.|.||+|.|+|. |. .+|||.+.+.
T Consensus 26 tlL~a~~~~g------i~i~~~C~~~G~Cg~C~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~~~~ 92 (111)
T 1i7h_A 26 TILDAALRNG------IEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVT 92 (111)
T ss_dssp BHHHHHHHTT------CCCCCTTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTCBCC
T ss_pred cHHHHHHHcC------CCCcccCCCCCcCCCCEEEEccCcccCCCCCHHHHHHhhhccccCCCcEEEEEEEEe
Confidence 6899998765 3356899 5899999999975 52 2789999984
No 53
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=96.76 E-value=0.0012 Score=53.22 Aligned_cols=45 Identities=13% Similarity=0.375 Sum_probs=33.8
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCC-CCCcCccEEEeC-C---------------------c----ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCR-EGICGSCAMNIG-G---------------------V----NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~-~~~CgsC~v~in-G---------------------~----~~laC~t~v~~~~ 51 (365)
|||+|+...+ +. ..++|+ .|.||+|.|+|. | . .+|||.+.+...+
T Consensus 22 tlLeaa~~~g------i~~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~d~ 94 (106)
T 1xlq_A 22 SLMQAAVSNG------IYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLCCQIIMTPEL 94 (106)
T ss_dssp BHHHHHHHTT------CTTSCCTTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEGGGCBCCGGG
T ss_pred cHHHHHHHcC------CCCCCcCCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEeeeeeEeecCC
Confidence 6899998776 23 568895 799999999874 4 1 2679999887643
No 54
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=96.73 E-value=0.00028 Score=49.94 Aligned_cols=48 Identities=19% Similarity=0.467 Sum_probs=31.4
Q ss_pred hhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 217 ~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
..|+.||.|..+||......+ .| . ....+. ....|+.||.|.++||.+
T Consensus 6 ~~C~~C~~C~~~CP~~~~~~~--~~--------------~--------~~~~~~-~~~~C~~C~~C~~~CP~~ 53 (58)
T 1f2g_A 6 DDCMACEACVEICPDVFEMNE--EG--------------D--------KAVVIN-PDSDLDCVEEAIDSCPAE 53 (58)
T ss_dssp TTCCCCCHHHHHCTTTEEECS--SS--------------S--------SEEESC-TTCCSTHHHHHHHTCSSC
T ss_pred CcCccchHHHHhCCccEEECC--CC--------------c--------EEEeCC-CccchHHHHHHHhhCChh
Confidence 789999999999997421110 00 0 000110 245799999999999987
No 55
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=96.62 E-value=0.0017 Score=52.59 Aligned_cols=30 Identities=17% Similarity=0.429 Sum_probs=23.9
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCC-CCCcCccEEEeC
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCR-EGICGSCAMNIG 36 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~-~~~CgsC~v~in 36 (365)
|||+||...+ +. ..++|+ .|.||+|.|+|.
T Consensus 22 tll~a~~~~g------i~~i~~~C~G~G~CgtC~v~v~ 53 (104)
T 3lxf_A 22 SLMEALRDAG------IDELLALCGGCCSCATCHVLVA 53 (104)
T ss_dssp BHHHHHHHTT------CTTCCCTTCSSSSCSTTEEEEC
T ss_pred hHHHHHHHcC------CCCCCcCCCCCCCCCCCEEEEC
Confidence 6889988765 22 457998 899999999874
No 56
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=96.51 E-value=0.0016 Score=52.85 Aligned_cols=44 Identities=16% Similarity=0.402 Sum_probs=33.4
Q ss_pred CHHHHHHHhhhccCCCcccccCCCC-CCcCccEEEeC-Cc------------------------cccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCRE-GICGSCAMNIG-GV------------------------NTLACISKIDAN 50 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~-~~CgsC~v~in-G~------------------------~~laC~t~v~~~ 50 (365)
|||+|+...+ +...++|+. |.||+|.|+|. |. .+|||.+.+...
T Consensus 27 tlL~aa~~~g------i~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~g~rLaCq~~~~~d 96 (109)
T 2y5c_A 27 NVLHLAQRHG------VDLEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLLQENSRLGCQIVLTPE 96 (109)
T ss_dssp BHHHHHHHTT------CCCCCTTSSSSSCCTTEEEECHHHHTTSCCCCHHHHHHHHTSTTCCTTEEEGGGCBCCGG
T ss_pred cHHHHHHHcC------CCCCcCCCCCcCcCccEEEECCcchhhcCCCCHHHHHHHhccccCCCCcEeeEEeEEecC
Confidence 6889988765 234578987 99999999974 31 368999998764
No 57
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=96.43 E-value=0.0015 Score=52.59 Aligned_cols=45 Identities=18% Similarity=0.381 Sum_probs=33.6
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCC-CCCcCccEEEeC-C---------------------c----ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCR-EGICGSCAMNIG-G---------------------V----NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~-~~~CgsC~v~in-G---------------------~----~~laC~t~v~~~~ 51 (365)
|||+|+...+ +. ..++|+ .|.||+|.|+|. | . .+|||.+.+...+
T Consensus 22 tlL~aa~~~g------i~~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~d~ 94 (106)
T 1uwm_A 22 TVMEAARDNG------VPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLTCQIKVTSLL 94 (106)
T ss_dssp BHHHHHHTTT------CTTCCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEGGGCBCCGGG
T ss_pred cHHHHHHHcC------CCCcccCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhcCccccCCCCcEecccCEEccCC
Confidence 6888887765 33 568995 799999999874 3 1 2689999887643
No 58
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=96.43 E-value=0.00034 Score=52.97 Aligned_cols=46 Identities=24% Similarity=0.447 Sum_probs=32.1
Q ss_pred chhccc--CCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 216 LYECIL--CACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 216 ~~~CI~--CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
...|+. ||.|..+||..... .. + + .+ .. ....|+.||.|..+||.+
T Consensus 5 ~~~C~~c~C~~C~~~CP~~ai~----~~------------~--~-----~~--~~---~~~~C~~C~~C~~~CP~~ 52 (78)
T 1h98_A 5 CEPCIGVKDQSCVEVCPVECIY----DG------------G--D-----QF--YI---HPEECIDCGACVPACPVN 52 (78)
T ss_dssp CGGGTTTCCCHHHHHCTTCCEE----EC------------S--S-----SE--EE---CTTTCCCCCTHHHHCTTC
T ss_pred chhCCCCCcChhhhhcCccceE----cC------------C--C-----EE--EE---CcccCCcHhHHHHhCCcc
Confidence 467999 99999999975431 10 0 0 00 01 245799999999999987
No 59
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=96.42 E-value=0.0017 Score=52.53 Aligned_cols=46 Identities=15% Similarity=0.371 Sum_probs=34.1
Q ss_pred CHHHHHHHhhhccCCCcccccCCCC-CCcCccEEEeC-C------c------------------cccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCRE-GICGSCAMNIG-G------V------------------NTLACISKIDAN 50 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~-~~CgsC~v~in-G------~------------------~~laC~t~v~~~ 50 (365)
|||+|+...+-. -|++ ++|+. |.||+|.|+|. | . .+|||.+.+...
T Consensus 28 tLL~aa~~~gi~-i~~~---~~Cgg~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~g~rLaCq~~~~~d 99 (108)
T 2bt6_A 28 SLLDVVVQNNLD-IDGF---GACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLTDRSRLGCQICLTKA 99 (108)
T ss_dssp BHHHHHHHTTCC-CTTT---TTTSSSSSBSTTEEECCHHHHTTSCCCCHHHHHHHTTCTTCCTTEEEGGGCBCCGG
T ss_pred hHHHHHHHcCCC-CCcc---cCCCCCcCcCCCEEEECccccccCCCCCHHHHHHHhCcccCCCCcEeeEEEEecCC
Confidence 689999887632 2222 89976 99999999986 3 0 368999988664
No 60
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=96.35 E-value=0.00052 Score=49.57 Aligned_cols=51 Identities=22% Similarity=0.414 Sum_probs=31.4
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
+...|+.||.|..+||......+. .| . . .+.. .....|..|+.|..+||.+
T Consensus 7 d~~~C~~Cg~C~~~CP~~~~~~~~-~~--------------~-------~-~~~~-~~~~~C~~C~~C~~~CP~~ 57 (64)
T 1dax_A 7 DQDECIACESCVEIAPGAFAMDPE-IE--------------K-------A-YVKD-VEGASQEEVEEAMDTCPVQ 57 (64)
T ss_dssp CSTTCCSCCHHHHHCTTTEEECSS-SS--------------S-------E-EECC-GGGSCHHHHHHHHHHSSSC
T ss_pred ccccCCCchHHHHhCCccEeEcCC-CC--------------E-------E-EEec-CCCcchhHHHHHHHhCCHh
Confidence 346899999999999932110000 00 0 0 0000 1235799999999999986
No 61
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=96.34 E-value=0.00058 Score=54.54 Aligned_cols=47 Identities=23% Similarity=0.448 Sum_probs=32.4
Q ss_pred chhcccC--CcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCC
Q psy5769 216 LYECILC--ACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 216 ~~~CI~C--G~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.| |.|..+||..... .. .. .. .. ....|+.||.|..+||.+.
T Consensus 5 ~~~C~~C~c~~C~~~CP~~ai~----~~-------------~~------~~--~~---~~~~C~~Cg~C~~~CP~~A 53 (105)
T 2v2k_A 5 AEPCVDVKDKACIEECPVDCIY----EG-------------AR------ML--YI---HPDECVDCGACEPVCPVEA 53 (105)
T ss_dssp CGGGTTTCCCHHHHHCTTCCEE----EC-------------SS------CE--EE---CTTTCCCCCCSGGGCTTCC
T ss_pred cccCCCCCcChhhhhcCccccC----cC-------------CC------cE--EE---eCCcCcchhhHHHhCCccC
Confidence 4679988 9999999986431 00 00 00 01 2457999999999999873
No 62
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=96.32 E-value=0.0025 Score=53.58 Aligned_cols=45 Identities=20% Similarity=0.491 Sum_probs=33.7
Q ss_pred CHHHHHHHhhhccCCCcc-cccCCC-CCCcCccEEEeC-Cc------------------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLT-FRRSCR-EGICGSCAMNIG-GV------------------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~-~~~~C~-~~~CgsC~v~in-G~------------------------~~laC~t~v~~~~ 51 (365)
|||+||...+ +. ..++|+ .|.||+|.|+|. |. .+|||.+.+...+
T Consensus 43 tLL~aa~~~g------i~gi~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e~~~g~RLaCQ~~~~~dl 114 (126)
T 3hui_A 43 TVMEAAIRNA------IPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRPNSRLSCQIKVSNEL 114 (126)
T ss_dssp BHHHHHHTTT------CTTCCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSSCCTTEEEGGGCBCCGGG
T ss_pred cHHHHHHHcC------CCCCccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhhccCCeEEeeeCEECcCC
Confidence 6888887765 23 557998 899999999874 31 2799999887653
No 63
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=96.18 E-value=0.00059 Score=76.85 Aligned_cols=21 Identities=29% Similarity=0.495 Sum_probs=17.9
Q ss_pred ccchhcccCCcccccCCCcee
Q psy5769 214 DGLYECILCACCSTSCPSYWW 234 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~~~~ 234 (365)
.+...||.||.|..+||....
T Consensus 683 ~d~~kCi~Cg~Cv~vCP~~AI 703 (1231)
T 2c42_A 683 WVPENCIQCNQCAFVCPHSAI 703 (1231)
T ss_dssp ECTTTCCCCCHHHHHCSSCCE
T ss_pred EeCccCCchhhHHHhCCcccc
Confidence 456899999999999998743
No 64
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=96.14 E-value=0.0011 Score=57.09 Aligned_cols=50 Identities=22% Similarity=0.498 Sum_probs=33.0
Q ss_pred cchhcccCC-----cccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 215 GLYECILCA-----CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 215 ~~~~CI~CG-----~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
+...|+.|| .|..+||.....-+. -+ . ..+. .....|+.||.|..+||.+
T Consensus 6 d~~~C~~C~~~~~~~C~~~CP~~ai~~~~-~~---------------------~-~~~~--id~~~C~~Cg~Cv~~CP~~ 60 (150)
T 1jnr_B 6 NPEKCDGCKALERTACEYICPNDLMTLDK-EK---------------------M-KAYN--REPDMCWECYSCVKMCPQG 60 (150)
T ss_dssp CTTTCCSCCSSSSCHHHHHCTTSCEEEET-TT---------------------T-EEEE--SCGGGCCCCCHHHHHCTTC
T ss_pred CcccCCCCCCcccccchhhcCccCeEEec-CC---------------------c-eeee--eCcccCcCHhHHHHhCCcc
Confidence 346899999 999999985421000 00 0 0000 1246799999999999987
No 65
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.04 E-value=0.00099 Score=58.41 Aligned_cols=51 Identities=24% Similarity=0.602 Sum_probs=33.5
Q ss_pred cchhcccCC-----cccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCC
Q psy5769 215 GLYECILCA-----CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 215 ~~~~CI~CG-----~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~g 289 (365)
+...|+.|| .|..+||..... +.. .. ...+ ......|+.||.|..+||.+
T Consensus 5 d~~~C~gC~~c~~~~C~~~CP~~ai~----~~~-------------~~------~~~~--~~d~~~C~~Cg~Cv~~CP~~ 59 (166)
T 3gyx_B 5 DPSKCDGCKGGEKTACMYICPNDLMI----LDP-------------EE------MKAF--NQEPEACWECYSCIKICPQG 59 (166)
T ss_dssp CTTTCCCCCSSSCCHHHHHCTTSCEE----EET-------------TT------TEEE--ESCGGGCCCCCHHHHHCSSC
T ss_pred cchhcCCCCCCCcchhHHhCCccccE----Eec-------------CC------ceeE--ecCcccCcccChHhHhCCcc
Confidence 346899999 999999986431 000 00 0000 01245799999999999987
Q ss_pred C
Q psy5769 290 L 290 (365)
Q Consensus 290 I 290 (365)
.
T Consensus 60 A 60 (166)
T 3gyx_B 60 A 60 (166)
T ss_dssp C
T ss_pred c
Confidence 4
No 66
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.00 E-value=0.0011 Score=50.32 Aligned_cols=17 Identities=29% Similarity=0.866 Sum_probs=14.9
Q ss_pred cchhcccCCcccccCCC
Q psy5769 215 GLYECILCACCSTSCPS 231 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~ 231 (365)
+...|+.||.|..+||.
T Consensus 7 d~~~CigCg~C~~~CP~ 23 (81)
T 1iqz_A 7 DKETCIACGACGAAAPD 23 (81)
T ss_dssp CTTTCCCCSHHHHHCTT
T ss_pred ecccCcccChhhHhCch
Confidence 45789999999999994
No 67
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=95.68 E-value=0.00093 Score=48.05 Aligned_cols=17 Identities=35% Similarity=0.714 Sum_probs=14.9
Q ss_pred cchhcccCCcccccCCC
Q psy5769 215 GLYECILCACCSTSCPS 231 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~ 231 (365)
+...|+.||.|..+||.
T Consensus 7 d~~~C~~C~~C~~~Cp~ 23 (66)
T 1sj1_A 7 DQDTCIGDAICASLCPD 23 (66)
T ss_dssp CTTTCCCCCHHHHHCTT
T ss_pred CcccCcCchHHHHhCCc
Confidence 34689999999999995
No 68
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=95.12 E-value=0.0045 Score=58.59 Aligned_cols=47 Identities=11% Similarity=0.104 Sum_probs=33.9
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCcccccccc----------c---c
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI----------M---N 281 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~C----------g---~ 281 (365)
+...|+.||.|..+||..... ..+ .......|+.| | +
T Consensus 95 d~~~CigC~~C~~~CP~~Ai~----~~~--------------------------~~~~~~kC~~C~~r~~~~~~~G~~P~ 144 (274)
T 1ti6_B 95 DPEKAKGKKELLDTCPYGVMY----WNE--------------------------EENVAQKCTMCAHLLDDESWAPKMPR 144 (274)
T ss_dssp CTTTTTTCGGGGGGCSSCCCE----EET--------------------------TTTEEECCCTTHHHHTCTTCTTCSCH
T ss_pred chhhccchHHHHhhCccCCeE----EEc--------------------------ccCccccCCCchhhhhhhccCCCCcc
Confidence 457899999999999986421 110 00135679999 9 9
Q ss_pred ccccCcCCCC
Q psy5769 282 CTRTCPKGLN 291 (365)
Q Consensus 282 C~~vCP~gI~ 291 (365)
|.++||.+.-
T Consensus 145 Cv~~CP~~Ai 154 (274)
T 1ti6_B 145 CAHNCGSFVY 154 (274)
T ss_dssp HHHHCSSCCE
T ss_pred hhhhCCcCce
Confidence 9999998743
No 69
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=95.08 E-value=0.0034 Score=61.60 Aligned_cols=19 Identities=26% Similarity=0.744 Sum_probs=15.5
Q ss_pred ccccccccc---------cccccCcCCC
Q psy5769 272 SVYRCHTIM---------NCTRTCPKGL 290 (365)
Q Consensus 272 ~l~~Ct~Cg---------~C~~vCP~gI 290 (365)
....|+.|+ +|+++||.+.
T Consensus 207 ~~~kC~~C~~r~~~g~~paCv~~CP~~A 234 (352)
T 2ivf_B 207 TSEKCILCYPRIEKGIANACNRQCPGRV 234 (352)
T ss_dssp EEEECCTTHHHHTTTBCCHHHHTCTTCC
T ss_pred cccccCCCcchhhcCCCChHHHhcCccc
Confidence 356799996 9999999776
No 70
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=95.06 E-value=0.013 Score=55.93 Aligned_cols=34 Identities=29% Similarity=0.683 Sum_probs=27.7
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEe-CCccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI-GGVNT 40 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~i-nG~~~ 40 (365)
||||||...+ +...++|+.|+||+|.++| .|...
T Consensus 256 ~ll~a~~~~g------~~~~~~C~~G~Cg~C~~~v~~G~~~ 290 (321)
T 2pia_A 256 SILEVLRDAN------VRVPSSCESGTCGSCKTALCSGEAD 290 (321)
T ss_dssp CHHHHHHHTT------CCCCCSCSSSSSCTTEEEEEESCEE
T ss_pred cHHHHHHHcC------CCCCCCCCCCCCCCCEEEEecCccc
Confidence 6899999876 4467899999999999986 57544
No 71
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=95.01 E-value=0.0038 Score=64.05 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=16.3
Q ss_pred ccccccccc---------cccccCcCCC
Q psy5769 272 SVYRCHTIM---------NCTRTCPKGL 290 (365)
Q Consensus 272 ~l~~Ct~Cg---------~C~~vCP~gI 290 (365)
....|+.|| +|+++||.++
T Consensus 240 ~~~kC~~Cg~ri~~G~~P~Cv~~CP~~A 267 (512)
T 1q16_B 240 KSEKCIFCYPRIEAGQPTVCSETCVGRI 267 (512)
T ss_dssp EEEECCTTHHHHTTTCCCHHHHTCTTCC
T ss_pred CcccCcCCCchhhcCCCCceEeeCchhh
Confidence 356799999 9999999877
No 72
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=94.93 E-value=0.0018 Score=63.49 Aligned_cols=52 Identities=23% Similarity=0.416 Sum_probs=35.1
Q ss_pred ccchhcccCC--cccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCC
Q psy5769 214 DGLYECILCA--CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291 (365)
Q Consensus 214 ~~~~~CI~CG--~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~ 291 (365)
.....|+.|+ .|..+||+.....+...| .+ .. ....|+.|+.|..+||.++-
T Consensus 146 ~~~~~C~~C~~~~Cv~~CP~gAi~~~~~~g---------------------~v--~i---d~~kCigCg~Cv~aCP~~Ai 199 (352)
T 2ivf_B 146 YLARMCNHCTNPACLAACPTGAIYKREDNG---------------------IV--LV---DQERCKGHRHCVEACPYKAI 199 (352)
T ss_dssp EEEECCCCCSSCHHHHHCTTCCEEECTTTC---------------------CE--EE---CTTTCCCCCHHHHHCTTCCE
T ss_pred ECCCCCcCcCCccccccCCCCceeecCCCC---------------------eE--Ee---chhhcCCchHHHhhcCccce
Confidence 4457899999 999999986532100000 00 11 23579999999999998864
No 73
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=94.79 E-value=0.0045 Score=59.05 Aligned_cols=46 Identities=33% Similarity=0.776 Sum_probs=32.4
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccc---------ccccc
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM---------NCTRT 285 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg---------~C~~v 285 (365)
+...|+.||.|..+||..... . +. .......|+.|+ +|..+
T Consensus 129 d~~~CigCg~C~~~CP~~ai~----~-------------~~-------------~~~~~~kC~~C~~r~~~g~~p~Cv~~ 178 (294)
T 1kqf_B 129 QSENCIGCGYCIAGCPFNIPR----L-------------NK-------------EDNRVYKCTLCVDRVSVGQEPACVKT 178 (294)
T ss_dssp CGGGCCCCCHHHHHCTTCCCE----E-------------ET-------------TTTEEECCCTTHHHHTTTCCCHHHHH
T ss_pred CcccCCCcchhhhcCCCCCcE----e-------------cC-------------CCCCeeeCCCccchhhcCccHHHHHh
Confidence 457899999999999975421 0 00 001245799998 99999
Q ss_pred CcCCC
Q psy5769 286 CPKGL 290 (365)
Q Consensus 286 CP~gI 290 (365)
||.+.
T Consensus 179 CP~~A 183 (294)
T 1kqf_B 179 CPTGA 183 (294)
T ss_dssp CTTSC
T ss_pred CCcCc
Confidence 99874
No 74
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=94.63 E-value=0.0097 Score=49.70 Aligned_cols=44 Identities=16% Similarity=0.396 Sum_probs=15.6
Q ss_pred CHHHHHHHhhhccCCCcccc--cCCC-CCCcCccEEEeC-C------------------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFR--RSCR-EGICGSCAMNIG-G------------------------VNTLACISKIDAN 50 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~--~~C~-~~~CgsC~v~in-G------------------------~~~laC~t~v~~~ 50 (365)
|||+|+...+- ... ++|+ .|.||+|.|.|. | ..||||++.+.+.
T Consensus 27 tLl~aa~~~gi------~i~g~~~CgG~g~CgtC~v~v~~~~~~~l~~~~~~E~~~L~~~~~~~~~~RLaCQ~~v~~~ 98 (123)
T 3n9z_C 27 SLLDVVVENNL------DIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLTDRSRLGCQICLTKS 98 (123)
T ss_dssp ----------------------CTTCSSSSCSTTBC--------------CHHHHHHCC--------CBCC-------
T ss_pred cHHHHHHHcCC------CCCcCCCCCCCCEeCCCeeEEeccccccCCCCChHHHhhhcccccccCCeEEeeEeEEccC
Confidence 56777776552 233 7897 799999999875 2 1379999999763
No 75
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=94.54 E-value=0.026 Score=59.35 Aligned_cols=45 Identities=24% Similarity=0.587 Sum_probs=35.4
Q ss_pred CHHHHHHHhhhccCCCcccccCCC-CCCcCccEEEe-CCc-----------------ccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCR-EGICGSCAMNI-GGV-----------------NTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~-~~~CgsC~v~i-nG~-----------------~~laC~t~v~~~~ 51 (365)
|||||+.+.+ +...++|+ .|+||+|.|+| .|. .+|||.+.+...+
T Consensus 22 tLLeAa~~aG------i~ip~~C~G~G~CGtC~v~V~~G~v~~~e~~~Ls~~e~~~G~rLaCqa~~~sDl 85 (631)
T 3zyy_X 22 NLMEALNLAG------INIKTVCGGAGTCGKCLVRVVDGQKRVESYGKLKQEEIAQGYVLACQTYPESDL 85 (631)
T ss_dssp CHHHHHHHHT------CCCCCSCCCSSCCSTTEEEEEESCEEESCCTTCCHHHHHTTEEETTTEEECSSE
T ss_pred cHHHHHHHcC------CCCCcCCCCCCcCCCCEEEEeeCcccccccccCCHHHhcCCcEEeeeCEECCCE
Confidence 6899998876 33578999 89999999986 332 4899999886543
No 76
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=94.47 E-value=0.008 Score=53.85 Aligned_cols=45 Identities=31% Similarity=0.656 Sum_probs=31.5
Q ss_pred cchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccc---------ccccc
Q psy5769 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM---------NCTRT 285 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg---------~C~~v 285 (365)
+...|+.||.|..+||..... +.+ .. +...|+.|+ +|+++
T Consensus 86 d~~~CigC~~C~~~CP~~Ai~----~~~--------------------------~~-~~~kC~~C~~~~~~g~~p~Cv~~ 134 (195)
T 2vpz_B 86 DPKKCIACGACIAACPYDARY----LHP--------------------------AG-YVSKCTFCAHRLEKGKVPACVET 134 (195)
T ss_dssp CTTTCCCCCHHHHHCTTCCCE----ECT--------------------------TS-SEECCCTTHHHHHTTCCCHHHHS
T ss_pred cCCCCCCcChhHhhCCCCCeE----ECC--------------------------CC-CCccCcCcchHHhCCCCchhHhh
Confidence 346799999999999975421 100 00 156799999 79999
Q ss_pred CcCCC
Q psy5769 286 CPKGL 290 (365)
Q Consensus 286 CP~gI 290 (365)
||.+.
T Consensus 135 CP~~A 139 (195)
T 2vpz_B 135 CPTYC 139 (195)
T ss_dssp CTTCC
T ss_pred CCccc
Confidence 99774
No 77
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.42 E-value=0.0051 Score=67.98 Aligned_cols=18 Identities=28% Similarity=0.595 Sum_probs=15.5
Q ss_pred ccchhcccCCcccccCCC
Q psy5769 214 DGLYECILCACCSTSCPS 231 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~ 231 (365)
.+...|+.||.|..+||.
T Consensus 948 id~~~C~~Cg~C~~~CP~ 965 (1025)
T 1gte_A 948 IDEEMCINCGKCYMTCND 965 (1025)
T ss_dssp ECTTTCCCCCHHHHHHHH
T ss_pred EEcccCcccCHHHHhcCc
Confidence 345789999999999996
No 78
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=94.30 E-value=0.0055 Score=54.94 Aligned_cols=50 Identities=24% Similarity=0.495 Sum_probs=34.2
Q ss_pred cchhcccCC--cccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCC
Q psy5769 215 GLYECILCA--CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291 (365)
Q Consensus 215 ~~~~CI~CG--~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~ 291 (365)
....|+.|| .|..+||+......+ .| .+ . .....|+.||.|..+||.+.-
T Consensus 54 ~~~~C~~C~~p~C~~~CP~gAi~~~~-~g---------------------~~--~---id~~~CigC~~C~~~CP~~Ai 105 (195)
T 2vpz_B 54 RPEQCLHCENPPCVPVCPTGASYQTK-DG---------------------LV--L---VDPKKCIACGACIAACPYDAR 105 (195)
T ss_dssp EEEECCCCSSCTTTTTCSSSCEEECT-TS---------------------CE--E---ECTTTCCCCCHHHHHCTTCCC
T ss_pred CcccCcCccCcHHHHhcCCCceeccc-cc---------------------ce--e---ecCCCCCCcChhHhhCCCCCe
Confidence 346899999 899999987542100 00 00 1 124579999999999998753
No 79
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=93.36 E-value=0.0074 Score=57.50 Aligned_cols=49 Identities=24% Similarity=0.457 Sum_probs=33.5
Q ss_pred chhcccCC--cccccCCC-ceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCC
Q psy5769 216 LYECILCA--CCSTSCPS-YWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291 (365)
Q Consensus 216 ~~~CI~CG--~C~s~CP~-~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~ 291 (365)
...|+.|| .|..+||+ ...... ..| .+. .....|+.||.|..+||.++.
T Consensus 97 ~~~C~~C~~~~C~~~CP~~gAi~~~-~~g------------------------~v~--id~~~CigCg~C~~~CP~~ai 148 (294)
T 1kqf_B 97 KDGCMHCEDPGCLKACPSAGAIIQY-ANG------------------------IVD--FQSENCIGCGYCIAGCPFNIP 148 (294)
T ss_dssp EESCCCBSSCHHHHHCCSTTSEEEE-TTS------------------------CEE--ECGGGCCCCCHHHHHCTTCCC
T ss_pred cccCCCcCChhhhhhCCccCccccc-ccc------------------------ceE--eCcccCCCcchhhhcCCCCCc
Confidence 46799999 89999998 432110 000 000 124679999999999998765
No 80
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=93.34 E-value=0.0071 Score=62.06 Aligned_cols=52 Identities=23% Similarity=0.355 Sum_probs=34.3
Q ss_pred ccchhcccCC--cccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCC
Q psy5769 214 DGLYECILCA--CCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291 (365)
Q Consensus 214 ~~~~~CI~CG--~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~ 291 (365)
.....|+.|+ .|..+||..........| . ... ....|+.||.|..+||.+.-
T Consensus 179 ~~~~~C~~C~~~~Cv~aCP~gAI~~~~~~g----------------------~-v~i---d~~kCigCg~Cv~~CP~~AI 232 (512)
T 1q16_B 179 YLPRLCEHCLNPACVATCPSGAIYKREEDG----------------------I-VLI---DQDKCRGWRMCITGCPYKKI 232 (512)
T ss_dssp EEEECCCCCSSCHHHHTCTTCCEEEETTTC----------------------C-EEE---CTTTCCCCCCHHHHCTTCCE
T ss_pred ecCccCcCCCCchhhhhCCcCcEEeecCCC----------------------e-EEE---CHHHCCCchHHHhhCCccce
Confidence 4557899999 699999976431000000 0 011 23579999999999998763
No 81
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=92.87 E-value=0.021 Score=53.96 Aligned_cols=48 Identities=19% Similarity=0.289 Sum_probs=33.3
Q ss_pred chhcccCCc--ccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCcCCCC
Q psy5769 216 LYECILCAC--CSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLN 291 (365)
Q Consensus 216 ~~~CI~CG~--C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP~gI~ 291 (365)
...|+.|+. |..+||+ ....++ .| .+ .. ....|+.|+.|..+||.+.-
T Consensus 65 ~~~C~~C~~p~C~~~CP~-Ai~~~~-~g---------------------~v--~i---d~~~CigC~~C~~~CP~~Ai 114 (274)
T 1ti6_B 65 PTPCMHCENAPCVAKGNG-AVYQRE-DG---------------------IV--LI---DPEKAKGKKELLDTCPYGVM 114 (274)
T ss_dssp EECCCCCTTCHHHHHTTT-SEEECT-TS---------------------CE--EE---CTTTTTTCGGGGGGCSSCCC
T ss_pred CCcCCCCCChHHHhhChH-Hhhhcc-CC---------------------cE--Ee---chhhccchHHHHhhCccCCe
Confidence 468999999 9999999 532100 00 00 11 23579999999999998764
No 82
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=92.28 E-value=0.075 Score=60.37 Aligned_cols=57 Identities=21% Similarity=0.385 Sum_probs=42.1
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeC----------Ccccccccccccc--cccccccccCCc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIG----------GVNTLACISKIDA--NDKVSKIYPLPH 61 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~in----------G~~~laC~t~v~~--~~~~~~~~p~~~ 61 (365)
|+|+.|+.-- . =-.-..+|.+|.||+|.|.|+ |+++.||.+++.. +.+.+|||=|.+
T Consensus 25 ~ll~~LR~~~---~-ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TiEgl~~ 93 (1332)
T 3unc_A 25 TLLAYLRRKL---G-LRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGS 93 (1332)
T ss_dssp BHHHHHHHTS---C-CTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGGTCC
T ss_pred CHHHHHhhhc---C-CCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCCEEEEeccccC
Confidence 4566665421 1 123467899999999999995 9999999999844 556778888864
No 83
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=91.87 E-value=0.021 Score=51.78 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=39.0
Q ss_pred cchhcc--cCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCcccccccc------c---ccc
Q psy5769 215 GLYECI--LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI------M---NCT 283 (365)
Q Consensus 215 ~~~~CI--~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~C------g---~C~ 283 (365)
+...|+ .||.|..+||..... ..+ .......|+.| | +|+
T Consensus 104 d~~~C~~~~C~~C~~~CP~~Ai~----~~~--------------------------~~~~~~kC~~C~~~~~~G~~p~Cv 153 (214)
T 1h0h_B 104 TPKTKDLEDYESVISACPYDVPR----KVA--------------------------ESNQMAKCDMCIDRITNGLRPACV 153 (214)
T ss_dssp CGGGGGCSCHHHHHHHCTTCCCE----ECT--------------------------TSSCEECCCTTHHHHTTTCCCHHH
T ss_pred eHHHCccccccHHHHhcCCCCeE----ecC--------------------------CCcccCcCCCCcchhhcCCChhHH
Confidence 446899 999999999976421 110 00135679999 5 999
Q ss_pred ccCcCCCC----hHHHHHHHHHHHh
Q psy5769 284 RTCPKGLN----PGRAIAEIKKLLS 304 (365)
Q Consensus 284 ~vCP~gI~----~~~~I~~lR~~l~ 304 (365)
.+||.+.- ..++....|+++.
T Consensus 154 ~~CP~~Ai~~~~~~~~~~~~~~~~~ 178 (214)
T 1h0h_B 154 TSCPTGAMNFGDLSEMEAMASARLA 178 (214)
T ss_dssp HHCSSSCEEEEEHHHHHHHHHHHHH
T ss_pred HhcCcccEEEccHHHHHHHHHHHHH
Confidence 99998743 3444444555554
No 84
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.82 E-value=0.13 Score=51.78 Aligned_cols=50 Identities=24% Similarity=0.216 Sum_probs=35.8
Q ss_pred CHHHHHHHhhhccCCCcccccCC-CCCC--cCccEEEeCCcc-cccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSC-REGI--CGSCAMNIGGVN-TLACISKIDANDKV 53 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C-~~~~--CgsC~v~inG~~-~laC~t~v~~~~~~ 53 (365)
||++||...+. +.+++...- +.|+ ||+|.|.|||.+ ..||.|.+.++|..
T Consensus 32 ti~~a~~~~g~---~~~~~~~~~~p~g~~~~~~c~v~v~g~~~~~ac~~~v~~Gm~v 85 (493)
T 1y56_A 32 KLPVALLANEI---YWLTTSNEGRKRGAFTFGPVPMTVNGVKGLEARRIKVKDGMKI 85 (493)
T ss_dssp BHHHHHHHTTC---CCCEECTTSCEECSSSSSCCEEBSSSCTTEEGGGCBCCTTCEE
T ss_pred HHHHHHHHCCC---ceecCCCCCCCCccccceEEEEEECCEecccceeEEcccCcEE
Confidence 68999997763 455422111 2244 789999999987 68999999999843
No 85
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=90.10 E-value=0.018 Score=52.25 Aligned_cols=19 Identities=11% Similarity=0.169 Sum_probs=16.3
Q ss_pred ccccc--ccccccccCcCCCC
Q psy5769 273 VYRCH--TIMNCTRTCPKGLN 291 (365)
Q Consensus 273 l~~Ct--~Cg~C~~vCP~gI~ 291 (365)
...|+ .|+.|..+||.+.-
T Consensus 105 ~~~C~~~~C~~C~~~CP~~Ai 125 (214)
T 1h0h_B 105 PKTKDLEDYESVISACPYDVP 125 (214)
T ss_dssp GGGGGCSCHHHHHHHCTTCCC
T ss_pred HHHCccccccHHHHhcCCCCe
Confidence 35799 99999999998764
No 86
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=87.51 E-value=0.033 Score=54.66 Aligned_cols=17 Identities=35% Similarity=0.671 Sum_probs=15.2
Q ss_pred cccccccccccccCcCC
Q psy5769 273 VYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~g 289 (365)
...|+.||.|..+||.+
T Consensus 238 ~~~C~~Cg~C~~~CP~~ 254 (366)
T 3mm5_B 238 VEKCMYCGNCYTMCPGM 254 (366)
T ss_dssp GGGCCCCCHHHHHCTTC
T ss_pred hhhCCCcchHHHhCCHh
Confidence 45699999999999986
No 87
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=86.79 E-value=0.13 Score=52.96 Aligned_cols=53 Identities=17% Similarity=0.106 Sum_probs=34.0
Q ss_pred cchhc------ccCCcccccCCCceeCC-cccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCc
Q psy5769 215 GLYEC------ILCACCSTSCPSYWWNG-EKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287 (365)
Q Consensus 215 ~~~~C------I~CG~C~s~CP~~~~~~-~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP 287 (365)
+...| ..||.|..+||+..+.- ++--|+ . .++. -....|+.||.|..+||
T Consensus 508 d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~--------------~----~~~~-----i~~~~Ci~C~~C~~~cp 564 (584)
T 2gmh_A 508 DDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGD--------------G----FRLQ-----INAQNCVHCKTCDIKDP 564 (584)
T ss_dssp STTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTT--------------C----EEEE-----ECGGGCCCCCHHHHHCT
T ss_pred CcccchhhchhhhcchhhhcCChhhEEEeecCCCC--------------c----eEEE-----EeCCCCcCCCCchhhCC
Confidence 34568 88999999999986421 000000 0 0010 14578999999999999
Q ss_pred CCC
Q psy5769 288 KGL 290 (365)
Q Consensus 288 ~gI 290 (365)
.+.
T Consensus 565 ~~~ 567 (584)
T 2gmh_A 565 SQN 567 (584)
T ss_dssp TCC
T ss_pred CCC
Confidence 764
No 88
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=83.74 E-value=0.36 Score=36.13 Aligned_cols=17 Identities=29% Similarity=0.708 Sum_probs=15.1
Q ss_pred ccccccccccccCcCCC
Q psy5769 274 YRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 274 ~~Ct~Cg~C~~vCP~gI 290 (365)
..|+.||.|..+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (82)
T 2fgo_A 6 DDCINCDVCEPECPNGA 22 (82)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred CCCCChhhHHHHCChhc
Confidence 57999999999999864
No 89
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=83.63 E-value=0.38 Score=33.01 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=14.9
Q ss_pred ccccccccccccCcCCC
Q psy5769 274 YRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 274 ~~Ct~Cg~C~~vCP~gI 290 (365)
..|+.||.|..+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (55)
T 2fdn_A 6 EACISCGACEPECPVNA 22 (55)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred ccCcChhhHHHHCCccc
Confidence 46999999999999864
No 90
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=83.36 E-value=0.36 Score=35.90 Aligned_cols=18 Identities=22% Similarity=0.589 Sum_probs=15.5
Q ss_pred cccccccccccccCcCCC
Q psy5769 273 VYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.||.|..+||.+.
T Consensus 5 ~~~C~~C~~C~~~CP~~a 22 (80)
T 1rgv_A 5 NDDCTACDACVEECPNEA 22 (80)
T ss_dssp CSCCCCCCTTTTTCTTCC
T ss_pred CCCCcChhhHHHHcChhc
Confidence 357999999999999864
No 91
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=83.06 E-value=0.4 Score=36.00 Aligned_cols=17 Identities=29% Similarity=0.722 Sum_probs=15.2
Q ss_pred ccccccccccccCcCCC
Q psy5769 274 YRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 274 ~~Ct~Cg~C~~vCP~gI 290 (365)
..|+.||.|..+||.+.
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (82)
T 3eun_A 6 DECINCDVCEPECPNGA 22 (82)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred CCCcCccchHHHCChhh
Confidence 57999999999999874
No 92
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=82.20 E-value=0.32 Score=35.82 Aligned_cols=19 Identities=32% Similarity=0.943 Sum_probs=16.2
Q ss_pred chhcccCCcccccCCCcee
Q psy5769 216 LYECILCACCSTSCPSYWW 234 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~ 234 (365)
...|+.||.|..+||....
T Consensus 44 ~~~C~~Cg~C~~~CP~~ai 62 (80)
T 1jb0_C 44 TEDCVGCKRCETACPTDFL 62 (80)
T ss_dssp GGGCCCCCHHHHHCCSSSC
T ss_pred CCcCcCcCChhhhCCCCcc
Confidence 4679999999999998643
No 93
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=81.86 E-value=0.44 Score=32.82 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=15.0
Q ss_pred cccccccccccccCcCCC
Q psy5769 273 VYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.||.|..+||..+
T Consensus 7 ~~~C~~C~~C~~~Cp~~~ 24 (60)
T 1rof_A 7 ADACIGCGVCENLCPDVF 24 (60)
T ss_dssp TTTCCSCCSSTTTCTTTB
T ss_pred hhhCCCChHHHHhCcHHH
Confidence 356999999999999643
No 94
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=81.64 E-value=0.23 Score=46.40 Aligned_cols=41 Identities=17% Similarity=0.318 Sum_probs=28.0
Q ss_pred ccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccccccccccCc
Q psy5769 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCP 287 (365)
Q Consensus 220 I~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~Cg~C~~vCP 287 (365)
..||.|...||.....- +.. .... .....|+.||.|..+||
T Consensus 174 ~~C~~C~~~CP~g~I~i-----------------d~~--------~~v~--~d~~~C~~C~~C~~vCp 214 (265)
T 2pa8_D 174 ANCEKAVNVCPEGVFEL-----------------KDG--------KLSV--KNELSCTLCEECLRYCN 214 (265)
T ss_dssp SCCTTHHHHCTTCCEEE-----------------ETT--------EEEE--SCGGGCCCCCHHHHHHT
T ss_pred hhHHHHHHhCcccCeEe-----------------cCC--------eeEE--eccccCCCchHHHHhCC
Confidence 78999999999865310 000 0000 13468999999999999
No 95
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=80.95 E-value=0.51 Score=37.17 Aligned_cols=19 Identities=42% Similarity=0.833 Sum_probs=16.4
Q ss_pred chhcccCCcccccCCCcee
Q psy5769 216 LYECILCACCSTSCPSYWW 234 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~ 234 (365)
...|+.||.|..+||....
T Consensus 36 ~~~C~~Cg~C~~~CP~~ai 54 (106)
T 7fd1_A 36 PDECIDCALCEPECPAQAI 54 (106)
T ss_dssp TTTCCCCCTTGGGCTTCCE
T ss_pred cccCCChhhhHHhCCChhh
Confidence 4679999999999998754
No 96
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=80.11 E-value=0.41 Score=37.23 Aligned_cols=19 Identities=32% Similarity=0.824 Sum_probs=16.3
Q ss_pred cchhcccCCcccccCCCce
Q psy5769 215 GLYECILCACCSTSCPSYW 233 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~ 233 (365)
+...|+.||.|..+||+..
T Consensus 79 ~~~~C~~Cg~C~~~CP~~A 97 (103)
T 1xer_A 79 NEQACIFCMACVNVCPVAA 97 (103)
T ss_dssp TGGGCCCCCHHHHHCTTCC
T ss_pred CcccccChhhHHHhccccc
Confidence 3468999999999999864
No 97
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=79.94 E-value=0.17 Score=50.55 Aligned_cols=18 Identities=33% Similarity=0.663 Sum_probs=15.7
Q ss_pred cccccccccccccCcCCC
Q psy5769 273 VYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~gI 290 (365)
...|+.||.|..+||.++
T Consensus 283 ~~~Ci~Cg~Ci~~CP~~~ 300 (418)
T 3mm5_A 283 NRECVRCMHCINKMPKAL 300 (418)
T ss_dssp TTTCCCCCHHHHHCTTTE
T ss_pred hhhcCccChhHHhCcHhh
Confidence 457999999999999765
No 98
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=79.41 E-value=0.33 Score=33.51 Aligned_cols=17 Identities=24% Similarity=0.665 Sum_probs=14.9
Q ss_pred ccccccccccccCcCCC
Q psy5769 274 YRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 274 ~~Ct~Cg~C~~vCP~gI 290 (365)
..|+.||.|..+||..+
T Consensus 6 ~~C~~C~~C~~~CP~~~ 22 (58)
T 1f2g_A 6 DDCMACEACVEICPDVF 22 (58)
T ss_dssp TTCCCCCHHHHHCTTTE
T ss_pred CcCccchHHHHhCCccE
Confidence 67999999999999744
No 99
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=79.34 E-value=0.39 Score=33.92 Aligned_cols=16 Identities=25% Similarity=0.628 Sum_probs=14.1
Q ss_pred ccccccccccccCcCCC
Q psy5769 274 YRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 274 ~~Ct~Cg~C~~vCP~gI 290 (365)
..|+.||.|..+|| ++
T Consensus 9 ~~C~~Cg~C~~~CP-~~ 24 (64)
T 1dax_A 9 DECIACESCVEIAP-GA 24 (64)
T ss_dssp TTCCSCCHHHHHCT-TT
T ss_pred ccCCCchHHHHhCC-cc
Confidence 57999999999999 53
No 100
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=78.96 E-value=0.66 Score=36.35 Aligned_cols=19 Identities=32% Similarity=0.744 Sum_probs=16.4
Q ss_pred chhcccCCcccccCCCcee
Q psy5769 216 LYECILCACCSTSCPSYWW 234 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~ 234 (365)
...|+.||.|..+||....
T Consensus 36 ~~~C~~Cg~C~~~CP~~Ai 54 (105)
T 2v2k_A 36 PDECVDCGACEPVCPVEAI 54 (105)
T ss_dssp TTTCCCCCCSGGGCTTCCE
T ss_pred CCcCcchhhHHHhCCccCE
Confidence 4679999999999998754
No 101
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=78.87 E-value=1.1 Score=33.63 Aligned_cols=19 Identities=26% Similarity=0.648 Sum_probs=16.2
Q ss_pred chhcccCC------cccccCCC-cee
Q psy5769 216 LYECILCA------CCSTSCPS-YWW 234 (365)
Q Consensus 216 ~~~CI~CG------~C~s~CP~-~~~ 234 (365)
...|+.|| .|..+||+ ...
T Consensus 34 ~~~C~~C~~~~~~~~C~~~CP~~~Ai 59 (85)
T 2zvs_A 34 SDKCTECVGHYETPTCQKVCPIPNTI 59 (85)
T ss_dssp GGGCCTTTTTCSSCHHHHHCSSCCEE
T ss_pred ChhccCCCCcCCccHhhHhCcCCCCE
Confidence 46899999 99999999 543
No 102
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=78.80 E-value=0.47 Score=35.16 Aligned_cols=19 Identities=37% Similarity=0.800 Sum_probs=16.5
Q ss_pred chhcccCCcccccCCCcee
Q psy5769 216 LYECILCACCSTSCPSYWW 234 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~ 234 (365)
...|+.||.|..+||....
T Consensus 36 ~~~C~~C~~C~~~CP~~Ai 54 (78)
T 1h98_A 36 PEECIDCGACVPACPVNAI 54 (78)
T ss_dssp TTTCCCCCTHHHHCTTCCE
T ss_pred cccCCcHhHHHHhCCccce
Confidence 4679999999999998754
No 103
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=77.76 E-value=0.61 Score=39.91 Aligned_cols=19 Identities=21% Similarity=0.536 Sum_probs=16.4
Q ss_pred ccccccccccccccCcCCC
Q psy5769 272 SVYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 272 ~l~~Ct~Cg~C~~vCP~gI 290 (365)
....|+.||.|..+||.+.
T Consensus 49 d~~~Ci~C~~C~~~CP~~a 67 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYA 67 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCC
T ss_pred CCccCcccccchhhCCccc
Confidence 4568999999999999874
No 104
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=76.67 E-value=0.52 Score=35.18 Aligned_cols=16 Identities=19% Similarity=0.405 Sum_probs=14.1
Q ss_pred cccccccccccccCcC
Q psy5769 273 VYRCHTIMNCTRTCPK 288 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~ 288 (365)
...|+.||.|..+||.
T Consensus 8 ~~~CigCg~C~~~CP~ 23 (81)
T 1iqz_A 8 KETCIACGACGAAAPD 23 (81)
T ss_dssp TTTCCCCSHHHHHCTT
T ss_pred cccCcccChhhHhCch
Confidence 4589999999999993
No 105
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=73.65 E-value=1 Score=30.73 Aligned_cols=15 Identities=27% Similarity=0.769 Sum_probs=13.6
Q ss_pred ccccccccccccCcC
Q psy5769 274 YRCHTIMNCTRTCPK 288 (365)
Q Consensus 274 ~~Ct~Cg~C~~vCP~ 288 (365)
..|+.||.|..+||.
T Consensus 7 ~~C~~C~~C~~~Cp~ 21 (59)
T 1dwl_A 7 EECIGCESCVELCPE 21 (59)
T ss_dssp CCCSSCCGGGGTSTT
T ss_pred hhCcChhHHHHHCCH
Confidence 569999999999995
No 106
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=71.42 E-value=0.96 Score=38.43 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=16.3
Q ss_pred chhcccCCcccccCCCcee
Q psy5769 216 LYECILCACCSTSCPSYWW 234 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~ 234 (365)
...|+.||.|..+||....
T Consensus 44 ~~~C~~Cg~Cv~~CP~~AI 62 (150)
T 1jnr_B 44 PDMCWECYSCVKMCPQGAI 62 (150)
T ss_dssp GGGCCCCCHHHHHCTTCCE
T ss_pred cccCcCHhHHHHhCCccce
Confidence 4679999999999998653
No 107
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=70.58 E-value=3.7 Score=44.92 Aligned_cols=52 Identities=8% Similarity=-0.104 Sum_probs=40.3
Q ss_pred CHHHHHHHhhhccCCCccccc------CCCCCCcCccEEEeC---C----c-ccccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRR------SCREGICGSCAMNIG---G----V-NTLACISKIDANDKV 53 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~------~C~~~~CgsC~v~in---G----~-~~laC~t~v~~~~~~ 53 (365)
||+.||...+. .....+|.+ -|.++.|..|.|.|+ | . +++||.|.+.++|..
T Consensus 39 tv~~aL~~~Gv-~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~~g~~~~~~~~ac~~~~~~gm~~ 104 (965)
T 2gag_A 39 TVASALLANGV-RRAGNSLYLDRPRGIFAAGVEEPNALVTVSARHEQDIDESMLPATTVPVTEDLNA 104 (965)
T ss_dssp BHHHHHHHTTC-CBCSCCTTTCCCCBCCCSSTTCCSCEEEECCCSTTCCCEEEEEGGGCBCCTTEEE
T ss_pred HHHHHHHHcCC-eEeecCCCCCCCcccccCCccCCceEEEEccCCCCCcCCccccceeeecccceEe
Confidence 68899999863 345556532 378899999999999 6 4 568999999999844
No 108
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=69.33 E-value=1.6 Score=32.07 Aligned_cols=17 Identities=24% Similarity=0.567 Sum_probs=14.8
Q ss_pred ccccc--cccccccCcCCC
Q psy5769 274 YRCHT--IMNCTRTCPKGL 290 (365)
Q Consensus 274 ~~Ct~--Cg~C~~vCP~gI 290 (365)
..|+. ||.|..+||.+.
T Consensus 6 ~~C~~c~C~~C~~~Cp~~a 24 (77)
T 1bc6_A 6 EPCIGTKDASCVEVCPVDC 24 (77)
T ss_dssp STTTTCCCCSSTTTCTTCC
T ss_pred ccCCCCCcchhHHhccccc
Confidence 46999 999999999873
No 109
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=69.21 E-value=1.2 Score=38.60 Aligned_cols=19 Identities=26% Similarity=0.513 Sum_probs=16.5
Q ss_pred chhcccCCcccccCCCcee
Q psy5769 216 LYECILCACCSTSCPSYWW 234 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~~~ 234 (365)
...|+.||.|..+||....
T Consensus 43 ~~~C~~Cg~Cv~~CP~~Ai 61 (166)
T 3gyx_B 43 PEACWECYSCIKICPQGAI 61 (166)
T ss_dssp GGGCCCCCHHHHHCSSCCE
T ss_pred cccCcccChHhHhCCccce
Confidence 4689999999999998754
No 110
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=69.11 E-value=0.91 Score=31.78 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=14.1
Q ss_pred cccccccccccccCcC
Q psy5769 273 VYRCHTIMNCTRTCPK 288 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~ 288 (365)
...|+.||.|..+||.
T Consensus 8 ~~~C~~C~~C~~~Cp~ 23 (66)
T 1sj1_A 8 QDTCIGDAICASLCPD 23 (66)
T ss_dssp TTTCCCCCHHHHHCTT
T ss_pred cccCcCchHHHHhCCc
Confidence 3579999999999994
No 111
>3i9v_1 NADH-quinone oxidoreductase subunit 1; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_1* 2fug_1* 3iam_1* 3ias_1* 3m9s_1*
Probab=67.25 E-value=1.5 Score=44.09 Aligned_cols=74 Identities=11% Similarity=0.170 Sum_probs=47.8
Q ss_pred ccchhcccCCcccccCCCceeCCcccCCHHHHHHHHHHHhccCChhHHHHHhhhcCCCccccccc-cccccccCcCCCCh
Q psy5769 214 DGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHT-IMNCTRTCPKGLNP 292 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~~~~~~~~~lgP~~l~~~~r~~~d~rd~~~~erl~~~~~~~~l~~Ct~-Cg~C~~vCP~gI~~ 292 (365)
..-.+|.+|+-|...||.. +.+....+..++.. .+.++.+. .+..|.. |+.|.-.|+...++
T Consensus 348 ~~~ESCgqCtpCr~Gt~~~------------l~~lL~ri~~G~g~--~~dld~L~---~l~~~i~~~s~C~lg~~A~~Pv 410 (438)
T 3i9v_1 348 YAHESCGKCTPCREGVAGF------------MVNLFAKIGTGQGE--EKDVENLE---ALLPLIEGRSFCPLADAAVWPV 410 (438)
T ss_dssp HHHHCCSCCHHHHTTTTTH------------HHHHHHHHTTTCCC--HHHHHHHH---HHHHHHTTCCSSTHHHHHHHHH
T ss_pred hhhhhCCCCccchhhHHHH------------HHHHHHHHHhCCCC--HHHHHHHH---HHHHHHccCCCCcCcHhHHHHH
Confidence 3457899999999999931 22333333333321 12222221 2345654 99999999999999
Q ss_pred HHHHHHHHHHHh
Q psy5769 293 GRAIAEIKKLLS 304 (365)
Q Consensus 293 ~~~I~~lR~~l~ 304 (365)
...|...|..+.
T Consensus 411 ~s~l~~Fr~E~e 422 (438)
T 3i9v_1 411 KGSLRHFKDQYL 422 (438)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999888664
No 112
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=65.84 E-value=0.78 Score=45.78 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=17.7
Q ss_pred cccchhcccCCc--ccccCCCce
Q psy5769 213 LDGLYECILCAC--CSTSCPSYW 233 (365)
Q Consensus 213 l~~~~~CI~CG~--C~s~CP~~~ 233 (365)
..+..+|+.||. |..+||+..
T Consensus 16 ~~~a~rc~~c~~~~C~~~CP~~~ 38 (456)
T 2vdc_G 16 NEQANRCSQCGVPFCQVHCPVSN 38 (456)
T ss_dssp HHHHHHSCCCSSCHHHHTSTTCC
T ss_pred HHHHHhhhcCCCchhhcCCCCCC
Confidence 345789999997 999999975
No 113
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=65.36 E-value=2.6 Score=41.96 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=26.4
Q ss_pred cccccccccc--ccccCcCCCChHHHHHHHHH
Q psy5769 272 SVYRCHTIMN--CTRTCPKGLNPGRAIAEIKK 301 (365)
Q Consensus 272 ~l~~Ct~Cg~--C~~vCP~gI~~~~~I~~lR~ 301 (365)
...+|+.|+. |...||.++++.+.|..+++
T Consensus 18 ~a~rc~~c~~~~C~~~CP~~~~i~~~~~~~~~ 49 (456)
T 2vdc_G 18 QANRCSQCGVPFCQVHCPVSNNIPDWLKLTSE 49 (456)
T ss_dssp HHHHSCCCSSCHHHHTSTTCCCHHHHHHHHHH
T ss_pred HHHhhhcCCCchhhcCCCCCCcHHHHHHHHHC
Confidence 3678999997 99999999999998888764
No 114
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=64.89 E-value=2.2 Score=42.38 Aligned_cols=20 Identities=35% Similarity=0.750 Sum_probs=17.1
Q ss_pred cchhcccCCcccccCCCcee
Q psy5769 215 GLYECILCACCSTSCPSYWW 234 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~ 234 (365)
+...|+.||.|..+||+...
T Consensus 62 ~~~~C~~Cg~C~~~CP~~Ai 81 (421)
T 1hfe_L 62 HIEACINCGQCLTHCPENAI 81 (421)
T ss_dssp CGGGCCCCCTTGGGCTTCCE
T ss_pred ChhhCCchhhHHHhhCcCCc
Confidence 35789999999999998754
No 115
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=61.53 E-value=5 Score=45.62 Aligned_cols=40 Identities=25% Similarity=0.542 Sum_probs=31.2
Q ss_pred cCCCCCCcCccEEEe------CCc----ccccccccccc--cccccccccCC
Q psy5769 21 RSCREGICGSCAMNI------GGV----NTLACISKIDA--NDKVSKIYPLP 60 (365)
Q Consensus 21 ~~C~~~~CgsC~v~i------nG~----~~laC~t~v~~--~~~~~~~~p~~ 60 (365)
.+|.+|=||+|.|+| +|+ ++=||-+++.. +...+|+|=|.
T Consensus 45 ~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~g~~v~TvEglg 96 (1335)
T 3zyv_A 45 YGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLHGAAVTTVEGIG 96 (1335)
T ss_dssp CSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECHHHHC
T ss_pred cccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHHhcCCEEEeeCCCC
Confidence 489999999999998 343 56699999843 56677777664
No 116
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=61.33 E-value=2.1 Score=42.10 Aligned_cols=19 Identities=32% Similarity=0.791 Sum_probs=16.5
Q ss_pred cchhcccCCcccccCCCce
Q psy5769 215 GLYECILCACCSTSCPSYW 233 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~ 233 (365)
+...|+.||.|..+||...
T Consensus 254 d~~~Ci~Cg~C~~~CP~~A 272 (386)
T 3or1_B 254 NNDRCMYCGNCYTMCPALP 272 (386)
T ss_dssp CTTTCCCCCHHHHHCTTCC
T ss_pred CCCcCCccccHHHhCcHhh
Confidence 4578999999999999854
No 117
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=58.91 E-value=2.3 Score=41.42 Aligned_cols=20 Identities=30% Similarity=0.778 Sum_probs=17.1
Q ss_pred ccchhcccCCcccccCCCce
Q psy5769 214 DGLYECILCACCSTSCPSYW 233 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~~~ 233 (365)
.+...|+.||.|..+||...
T Consensus 236 id~~~C~~Cg~C~~~CP~~A 255 (366)
T 3mm5_B 236 VDVEKCMYCGNCYTMCPGMP 255 (366)
T ss_dssp ECGGGCCCCCHHHHHCTTCC
T ss_pred EehhhCCCcchHHHhCCHhh
Confidence 35578999999999999964
No 118
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=57.30 E-value=3.8 Score=44.21 Aligned_cols=25 Identities=24% Similarity=0.592 Sum_probs=21.2
Q ss_pred cccccccccccccCcCCCChHHHHH
Q psy5769 273 VYRCHTIMNCTRTCPKGLNPGRAIA 297 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~gI~~~~~I~ 297 (365)
...|+.||.|..+||.++.+..++.
T Consensus 414 ~~~Ci~CG~C~~~CP~~~~~~~il~ 438 (807)
T 3cf4_A 414 VAKCADCGACLLACPEEIDIPEAMG 438 (807)
T ss_dssp HHHCCCCCHHHHHCTTCCCHHHHHH
T ss_pred HHhCCCCCchhhhCCCCCchHHHHH
Confidence 5679999999999999998766554
No 119
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=51.98 E-value=3.5 Score=42.33 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=18.0
Q ss_pred ccchhcccCCcccccCCCcee
Q psy5769 214 DGLYECILCACCSTSCPSYWW 234 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~~~~ 234 (365)
.+...||+||.|...||....
T Consensus 548 i~~~~Ci~C~~C~~~cp~~~i 568 (584)
T 2gmh_A 548 INAQNCVHCKTCDIKDPSQNI 568 (584)
T ss_dssp ECGGGCCCCCHHHHHCTTCCE
T ss_pred EeCCCCcCCCCchhhCCCCCc
Confidence 466789999999999998754
No 120
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=51.93 E-value=3.3 Score=41.30 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=17.3
Q ss_pred cchhcccCCcccccCCCcee
Q psy5769 215 GLYECILCACCSTSCPSYWW 234 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~ 234 (365)
+...|+.||.|..+||....
T Consensus 282 d~~~Ci~Cg~Ci~~CP~~~~ 301 (418)
T 3mm5_A 282 DNRECVRCMHCINKMPKALK 301 (418)
T ss_dssp CTTTCCCCCHHHHHCTTTEE
T ss_pred ChhhcCccChhHHhCcHhhc
Confidence 55789999999999999754
No 121
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=50.80 E-value=3.5 Score=46.52 Aligned_cols=17 Identities=29% Similarity=1.017 Sum_probs=15.4
Q ss_pred cchhcccCCcccccCCC
Q psy5769 215 GLYECILCACCSTSCPS 231 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~ 231 (365)
+...|+.||.|..+||+
T Consensus 740 ~~~~C~gCG~Cv~vCP~ 756 (1231)
T 2c42_A 740 NTLDCMGCGNCADICPP 756 (1231)
T ss_dssp CTTTCCCCCHHHHHCSS
T ss_pred chhhCCChhHHHhhCCC
Confidence 44689999999999999
No 122
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=50.20 E-value=3.4 Score=40.53 Aligned_cols=17 Identities=35% Similarity=0.594 Sum_probs=14.9
Q ss_pred cccccccccccccCcCC
Q psy5769 273 VYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~g 289 (365)
...|+.||.|..+||.+
T Consensus 255 ~~~Ci~Cg~C~~~CP~~ 271 (386)
T 3or1_B 255 NDRCMYCGNCYTMCPAL 271 (386)
T ss_dssp TTTCCCCCHHHHHCTTC
T ss_pred CCcCCccccHHHhCcHh
Confidence 45799999999999984
No 123
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=49.05 E-value=16 Score=40.16 Aligned_cols=29 Identities=28% Similarity=0.630 Sum_probs=25.2
Q ss_pred cccccccc--cccccCcCCCChHHHHHHHHH
Q psy5769 273 VYRCHTIM--NCTRTCPKGLNPGRAIAEIKK 301 (365)
Q Consensus 273 l~~Ct~Cg--~C~~vCP~gI~~~~~I~~lR~ 301 (365)
..+|..|+ -|...||.++++.+.|..+++
T Consensus 76 a~rc~~c~~~~C~~~CP~~~~ip~~~~~~~~ 106 (1025)
T 1gte_A 76 AMRCLKCADAPCQKSCPTHLDIKSFITSISN 106 (1025)
T ss_dssp HHHSCCCTTCHHHHTSTTCCCHHHHHHHHHT
T ss_pred HHHhcCCCCCccccCCCCCCCHHHHHHHHHC
Confidence 46799999 699999999999999988763
No 124
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=48.94 E-value=3.8 Score=42.28 Aligned_cols=20 Identities=30% Similarity=0.747 Sum_probs=17.0
Q ss_pred cchhcccCCcccccCCCcee
Q psy5769 215 GLYECILCACCSTSCPSYWW 234 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~~~~ 234 (365)
+...|+.||.|..+||+...
T Consensus 186 ~~~~Ci~Cg~Cv~~CP~gAi 205 (574)
T 3c8y_A 186 DDTNCLLCGQCIIACPVAAL 205 (574)
T ss_dssp GGSSCCCCCHHHHHCSSTTE
T ss_pred chhhCCcchhHHHhhccCCc
Confidence 44789999999999998754
No 125
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=45.94 E-value=4.8 Score=40.31 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=17.6
Q ss_pred ccchhcccCCcccccCCCcee
Q psy5769 214 DGLYECILCACCSTSCPSYWW 234 (365)
Q Consensus 214 ~~~~~CI~CG~C~s~CP~~~~ 234 (365)
.+-..|+.||.|..+||....
T Consensus 298 Id~~~C~~Cg~Ci~~CP~al~ 318 (437)
T 3or1_A 298 IDNKNCTRCMHCINTMPRALK 318 (437)
T ss_dssp ECGGGCCCCSHHHHHCTTTEE
T ss_pred EccccCCchhhhHhhCcHhhc
Confidence 355799999999999998653
No 126
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=38.62 E-value=6.1 Score=42.21 Aligned_cols=18 Identities=11% Similarity=0.027 Sum_probs=14.8
Q ss_pred hcccCCcccccCCCceeC
Q psy5769 218 ECILCACCSTSCPSYWWN 235 (365)
Q Consensus 218 ~CI~CG~C~s~CP~~~~~ 235 (365)
.|+.||.|..+||+....
T Consensus 219 ~C~~CG~Cv~vCP~gAl~ 236 (783)
T 3i9v_3 219 PSGFSGNITDICPVGALL 236 (783)
T ss_dssp CSTTTTTHHHHCSSSSEE
T ss_pred CCccchhHHhhcccCcee
Confidence 699999999999987653
No 127
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=35.36 E-value=7.2 Score=39.05 Aligned_cols=18 Identities=33% Similarity=0.722 Sum_probs=15.5
Q ss_pred cccccccccccccCcCCC
Q psy5769 273 VYRCHTIMNCTRTCPKGL 290 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~gI 290 (365)
--.|+.||.|..+||..+
T Consensus 300 ~~~C~~Cg~Ci~~CP~al 317 (437)
T 3or1_A 300 NKNCTRCMHCINTMPRAL 317 (437)
T ss_dssp GGGCCCCSHHHHHCTTTE
T ss_pred cccCCchhhhHhhCcHhh
Confidence 458999999999999754
No 128
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=30.85 E-value=7.1 Score=40.60 Aligned_cols=21 Identities=29% Similarity=0.555 Sum_probs=17.0
Q ss_pred cccchhcccCCcccccCCCce
Q psy5769 213 LDGLYECILCACCSTSCPSYW 233 (365)
Q Consensus 213 l~~~~~CI~CG~C~s~CP~~~ 233 (365)
+....-||.||.|+.-||...
T Consensus 49 ~i~~~~c~~~~~~~~~cp~~~ 69 (608)
T 3j16_B 49 FISEILCIGCGICVKKCPFDA 69 (608)
T ss_dssp EECTTTCCCCCHHHHHCSSCC
T ss_pred EEehhhccccccccccCCccc
Confidence 334468999999999999764
No 129
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=28.92 E-value=80 Score=24.32 Aligned_cols=50 Identities=26% Similarity=0.502 Sum_probs=31.5
Q ss_pred CHHHHHHHhhhccCCCcccc--cCC--CCCC---cCccEEEeCCcccc---cccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFR--RSC--REGI---CGSCAMNIGGVNTL---ACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~--~~C--~~~~---CgsC~v~inG~~~l---aC~t~v~~~~ 51 (365)
||-|+|..+...+ |.+.-. ..+ +..+ |||=+|.|||+... .-.|.+.++.
T Consensus 29 tv~~ll~~L~~~~-p~l~~~l~~~g~l~~~v~~~~~~~~v~VNg~~v~~~~~~~~~L~~gD 88 (99)
T 2l52_A 29 KVIDVLLSLTDKY-PALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDSD 88 (99)
T ss_dssp SHHHHHHHHHHHC-GGGTTTSBCSCCTTSSCCCBCSSCEEEETTSCGGGTTSTTSCCCTTE
T ss_pred cHHHHHHHHHHHC-hhHHHHHhcccccccceeccccccEEEECCEEccccCCCCCCCCCCC
Confidence 5777788776543 433211 122 3334 99999999998653 4567777774
No 130
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=28.46 E-value=48 Score=23.89 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=25.4
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~~ 51 (365)
||-|+|..+...+ |.+ .++ .|+|.|||+..-. .|.+.++.
T Consensus 27 tv~~ll~~l~~~~-p~~-------~~v--~~~v~vNg~~v~~-~~~L~~gD 66 (77)
T 2q5w_D 27 TVQQFEDLLFERY-PQI-------NNK--KFQVAVNEEFVQK-SDFIQPND 66 (77)
T ss_dssp EHHHHHHHHHHHC-GGG-------TTC--CCEEEETTEEECT-TSEECTTC
T ss_pred CHHHHHHHHHHHC-cch-------hcc--eEEEEECCEECCC-CCCcCCCC
Confidence 4667777776443 333 122 5899999985533 57888775
No 131
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=24.98 E-value=15 Score=38.01 Aligned_cols=17 Identities=29% Similarity=0.741 Sum_probs=14.6
Q ss_pred chhcccCCcccccCCCc
Q psy5769 216 LYECILCACCSTSCPSY 232 (365)
Q Consensus 216 ~~~CI~CG~C~s~CP~~ 232 (365)
..-||.||.|+..||..
T Consensus 66 e~~c~gc~~~~~~~p~~ 82 (607)
T 3bk7_A 66 EASCTGCGICVHKCPFN 82 (607)
T ss_dssp TTTCCCCCHHHHHCSSC
T ss_pred ecccCccccccCCCCcc
Confidence 35799999999999964
No 132
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=24.45 E-value=15 Score=33.88 Aligned_cols=17 Identities=29% Similarity=0.774 Sum_probs=14.7
Q ss_pred cchhcccCCcccccCCC
Q psy5769 215 GLYECILCACCSTSCPS 231 (365)
Q Consensus 215 ~~~~CI~CG~C~s~CP~ 231 (365)
+...|+.||.|..+||.
T Consensus 199 d~~~C~~C~~C~~vCp~ 215 (265)
T 2pa8_D 199 NELSCTLCEECLRYCNG 215 (265)
T ss_dssp CGGGCCCCCHHHHHHTT
T ss_pred ccccCCCchHHHHhCCC
Confidence 34789999999999993
No 133
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=24.30 E-value=1e+02 Score=22.13 Aligned_cols=42 Identities=12% Similarity=0.114 Sum_probs=27.9
Q ss_pred CHHHHHHHhhhccCCCcccccCCCCCCcCccEEEeCCcccccccccccccc
Q psy5769 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND 51 (365)
Q Consensus 1 ~vl~al~~i~~~~d~~l~~~~~C~~~~CgsC~v~inG~~~laC~t~v~~~~ 51 (365)
||-+.+..+.. .|.+.-. =..|++.|||+.+..=.|.+.++.
T Consensus 22 tv~~ll~~L~~--~~~l~~~-------l~~~~vavN~~~v~~~~~~l~~gD 63 (74)
T 3rpf_C 22 DLKELRAILQE--KEGLKEW-------LGVCAIALNDHLIDNLNTPLKDGD 63 (74)
T ss_dssp SHHHHHHHHHT--CTTTTTT-------TTTCEEEESSSEECCTTCCCCTTC
T ss_pred cHHHHHHHHHH--CcCHHHH-------hhccEEEECCEEcCCCCcCCCCCC
Confidence 56777777764 2544311 146999999998545577888775
No 134
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=23.25 E-value=18 Score=37.60 Aligned_cols=17 Identities=24% Similarity=0.514 Sum_probs=14.9
Q ss_pred cccccccccccccCcCC
Q psy5769 273 VYRCHTIMNCTRTCPKG 289 (365)
Q Consensus 273 l~~Ct~Cg~C~~vCP~g 289 (365)
-..|..||-|+..||.+
T Consensus 52 ~~~c~~~~~~~~~cp~~ 68 (608)
T 3j16_B 52 EILCIGCGICVKKCPFD 68 (608)
T ss_dssp TTTCCCCCHHHHHCSSC
T ss_pred hhhccccccccccCCcc
Confidence 35799999999999976
Done!