Your job contains 1 sequence.
>psy5769
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP
HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPA
KYKTFAIYRWNPDKPDEKPTMQEYKVDLNNKIDANDKVSKIYPLPHMYVVKDLVPDMNNF
YAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYL
GPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIK
KLLSGLVKKDKPGLDTAALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPW
LPRSI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5769
(365 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0014028 - symbol:SdhB "Succinate dehydrogenase B" ... 779 2.4e-87 2
UNIPROTKB|B0BM36 - symbol:sdhb "Succinate dehydrogenase [... 687 6.5e-81 2
UNIPROTKB|Q3B8J8 - symbol:sdhb "Succinate dehydrogenase [... 693 1.7e-80 2
ZFIN|ZDB-GENE-030131-8005 - symbol:sdhb "succinate dehydr... 707 7.4e-80 2
RGD|1308598 - symbol:Sdhb "succinate dehydrogenase comple... 687 4.1e-79 2
UNIPROTKB|F1NNF7 - symbol:SDHB "Succinate dehydrogenase [... 690 1.1e-78 2
UNIPROTKB|Q3T189 - symbol:SDHB "Succinate dehydrogenase [... 689 1.4e-78 2
UNIPROTKB|Q007T0 - symbol:SDHB "Succinate dehydrogenase [... 689 1.7e-78 2
MGI|MGI:1914930 - symbol:Sdhb "succinate dehydrogenase co... 688 1.7e-78 2
UNIPROTKB|P21912 - symbol:SDHB "Succinate dehydrogenase [... 691 2.2e-78 2
UNIPROTKB|Q9YHT2 - symbol:SDHB "Succinate dehydrogenase [... 690 2.2e-78 2
UNIPROTKB|F1Q3W8 - symbol:SDHB "Uncharacterized protein" ... 693 2.8e-78 2
UNIPROTKB|I3LDC1 - symbol:SDHB "Succinate dehydrogenase [... 684 5.9e-78 2
FB|FBgn0030975 - symbol:CG7349 species:7227 "Drosophila m... 672 2.5e-73 2
SGD|S000003964 - symbol:SDH2 "Iron-sulfur protein subunit... 627 1.8e-72 2
CGD|CAL0000978 - symbol:SDH2 species:5476 "Candida albica... 610 5.3e-71 2
UNIPROTKB|Q59QN7 - symbol:SDH2 "Putative uncharacterized ... 610 5.3e-71 2
UNIPROTKB|A8WPF0 - symbol:sdhb-1 "Succinate dehydrogenase... 626 2.3e-70 2
POMBASE|SPAC140.01 - symbol:sdh2 "succinate dehydrogenase... 602 7.7e-70 2
ASPGD|ASPL0000047708 - symbol:AN2332 species:162425 "Emer... 597 8.7e-69 2
WB|WBGene00006433 - symbol:sdhb-1 species:6239 "Caenorhab... 619 2.3e-68 2
UNIPROTKB|Q09545 - symbol:sdhb-1 "Succinate dehydrogenase... 619 2.3e-68 2
TAIR|locus:2168818 - symbol:SDH2-2 "succinate dehydrogena... 558 6.1e-64 2
TIGR_CMR|ECH_0316 - symbol:ECH_0316 "succinate dehydrogen... 590 1.3e-63 2
TIGR_CMR|SPO_0361 - symbol:SPO_0361 "succinate dehydrogen... 593 5.4e-63 2
TAIR|locus:2086716 - symbol:SDH2-1 "succinate dehydrogena... 542 8.8e-61 2
TIGR_CMR|APH_0159 - symbol:APH_0159 "succinate dehydrogen... 572 1.1e-60 2
TIGR_CMR|APH_0162 - symbol:APH_0162 "succinate dehydrogen... 572 1.1e-60 2
GENEDB_PFALCIPARUM|PFL0630w - symbol:PFL0630w "iron-sulfu... 557 4.2e-59 2
UNIPROTKB|Q8I5S5 - symbol:PFL0630w "Iron-sulfur subunit o... 557 4.2e-59 2
TAIR|locus:504954878 - symbol:SDH2-3 "succinate dehydroge... 501 2.0e-57 2
DICTYBASE|DDB_G0270120 - symbol:sdhB "succinate dehydroge... 528 9.9e-56 2
TIGR_CMR|NSE_0534 - symbol:NSE_0534 "succinate dehydrogen... 546 1.0e-52 1
UNIPROTKB|P07014 - symbol:sdhB "succinate dehydrogenase i... 486 9.9e-52 2
UNIPROTKB|Q4KFZ0 - symbol:sdhB "Succinate dehydrogenase, ... 481 4.7e-50 2
UNIPROTKB|Q48K72 - symbol:sdhB "Succinate dehydrogenase, ... 471 4.7e-50 2
TIGR_CMR|CBU_1400 - symbol:CBU_1400 "succinate dehydrogen... 468 7.7e-50 2
TIGR_CMR|SO_1929 - symbol:SO_1929 "succinate dehydrogenas... 461 7.7e-50 2
TIGR_CMR|CPS_2218 - symbol:CPS_2218 "succinate dehydrogen... 470 1.6e-49 2
UNIPROTKB|Q9KQB2 - symbol:VC_2088 "Succinate dehydrogenas... 464 4.2e-49 2
TIGR_CMR|VC_2088 - symbol:VC_2088 "succinate dehydrogenas... 464 4.2e-49 2
UNIPROTKB|O53371 - symbol:sdhB "Succinate dehydrogenase a... 331 6.2e-33 2
TIGR_CMR|CHY_0064 - symbol:CHY_0064 "fumarate reductase, ... 198 7.9e-25 2
TIGR_CMR|CHY_1370 - symbol:CHY_1370 "fumarate reductase, ... 229 6.5e-19 1
TIGR_CMR|SO_0399 - symbol:SO_0399 "fumarate reductase iro... 142 8.7e-17 2
UNIPROTKB|Q9KNS4 - symbol:VC_2657 "Fumarate reductase, ir... 205 3.6e-16 1
TIGR_CMR|VC_2657 - symbol:VC_2657 "fumarate reductase, ir... 205 3.6e-16 1
UNIPROTKB|P0AC47 - symbol:frdB "fumarate reductase iron-s... 196 3.7e-15 1
TIGR_CMR|CJE_0489 - symbol:CJE_0489 "succinate dehydrogen... 154 1.9e-08 1
TIGR_CMR|BA_4753 - symbol:BA_4753 "succinate dehydrogenas... 147 5.1e-08 1
TIGR_CMR|CJE_0459 - symbol:CJE_0459 "fumarate reductase, ... 134 1.5e-06 1
UNIPROTKB|O53669 - symbol:Rv0247c "PROBABLE SUCCINATE DEH... 131 3.8e-06 1
UNIPROTKB|Q74DY7 - symbol:frdB "Succinate dehydrogenase/f... 79 0.00021 2
TIGR_CMR|GSU_1178 - symbol:GSU_1178 "fumarate reductase, ... 79 0.00021 2
>FB|FBgn0014028 [details] [associations]
symbol:SdhB "Succinate dehydrogenase B" species:7227
"Drosophila melanogaster" [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=ISS;NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS;NAS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS;NAS] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
EMBL:AE013599 GO:GO:0005875 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GO:GO:0008177 eggNOG:COG0479 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 EMBL:L27705 EMBL:AY118923
RefSeq:NP_477101.1 UniGene:Dm.497 ProteinModelPortal:P21914
SMR:P21914 DIP:DIP-20115N IntAct:P21914 MINT:MINT-929605
STRING:P21914 PaxDb:P21914 EnsemblMetazoa:FBtr0086156 GeneID:35590
KEGG:dme:Dmel_CG3283 FlyBase:FBgn0014028 InParanoid:P21914
OrthoDB:EOG4XGXFW PhylomeDB:P21914 GenomeRNAi:35590 NextBio:794181
Bgee:P21914 GermOnline:CG3283 Uniprot:P21914
Length = 297
Score = 779 (279.3 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 143/176 (81%), Positives = 154/176 (87%)
Query: 150 NKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE---NIGNAQYLQ 205
+KID N S K+YPLPHMYVV+DLVPDMNNFY QY++IQPWLQR E G AQYLQ
Sbjct: 122 SKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQ 181
Query: 206 SLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLN 265
S++DR KLDGLYECILCACCSTSCPSYWWN EKYLGPAVLMQAYRWIIDSRDE +A+RLN
Sbjct: 182 SVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLN 241
Query: 266 QLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAALHK 321
+LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGL K P L+TAALHK
Sbjct: 242 KLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLASKPAPKLETAALHK 297
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 75/91 (82%), Positives = 79/91 (86%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGG NTLACISKID N S K+YPL
Sbjct: 78 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPL 137
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYVV+DLVPDMNNFY QY++IQ PW
Sbjct: 138 PHMYVVRDLVPDMNNFYEQYRNIQ-----PW 163
Score = 188 (71.2 bits), Expect = 5.8e-21, Sum P(2) = 5.8e-21
Identities = 36/53 (67%), Positives = 42/53 (79%)
Query: 313 GLDT-AALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A + KID N S K+YPLPHMYVV+DLVPDMNNFY QY++IQPWL R
Sbjct: 114 GTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQR 166
Score = 113 (44.8 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 93 LGTLTAKN-IRSFQLSAAA--SSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
+G+L A+N +R+ A A P E + + K F IYRWNPD EKP MQ Y+VDL
Sbjct: 13 VGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDL 72
>UNIPROTKB|B0BM36 [details] [associations]
symbol:sdhb "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 CTD:6390 GeneTree:ENSGT00390000013558
HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4 EMBL:BC158270
RefSeq:NP_001120000.1 UniGene:Str.51669 ProteinModelPortal:B0BM36
SMR:B0BM36 STRING:B0BM36 Ensembl:ENSXETT00000029442
GeneID:100144957 KEGG:xtr:100144957 Xenbase:XB-GENE-970193
OMA:LIVDMEP Bgee:B0BM36 Uniprot:B0BM36
Length = 284
Score = 687 (246.9 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 121/156 (77%), Positives = 142/156 (91%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 120 RIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKEQYLQSIE 179
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 180 DRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDYTEERLAKLQ 239
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 240 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 275
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 74/87 (85%), Positives = 79/87 (90%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 75 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 134
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 135 PHMYVVKDLVPDLSNFYAQYKSIEPYL 161
Score = 184 (69.8 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 112 GNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 163
Score = 144 (55.7 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 84 RHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQE 143
R G +++ G L R Q +AAA+ A AE A+ K FAIYRW+PDKP +KP MQ
Sbjct: 9 RRSGPVFRLPGVLQV--CRGAQTAAAAAPASQAE--ARIKKFAIYRWDPDKPGDKPRMQT 64
Query: 144 YKVDLN 149
Y+VDLN
Sbjct: 65 YEVDLN 70
>UNIPROTKB|Q3B8J8 [details] [associations]
symbol:sdhb "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:8355 "Xenopus laevis"
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
HOVERGEN:HBG005483 HSSP:Q9YHT2 EMBL:BC043859 EMBL:BC106300
RefSeq:NP_001080247.1 UniGene:Xl.12560 ProteinModelPortal:Q3B8J8
SMR:Q3B8J8 PRIDE:Q3B8J8 GeneID:379939 KEGG:xla:379939
Xenbase:XB-GENE-970197 Uniprot:Q3B8J8
Length = 282
Score = 693 (249.0 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 122/156 (78%), Positives = 143/156 (91%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ DK G QYLQS++
Sbjct: 118 RIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDKSQQGKEQYLQSIE 177
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ T +RL++L+
Sbjct: 178 DRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLSKLQ 237
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 238 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 273
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 73/87 (83%), Positives = 79/87 (90%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVVKDLVPDLSNFYAQYKSIEPYL 159
Score = 184 (69.8 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 161
Score = 134 (52.2 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 103 SFQLSAAA-SSAVPAEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
+ Q+S A ++A PA + A + K FAIYRW+PDKP +KP MQ Y+VDLN
Sbjct: 20 ALQVSRGAQTAAAPASQAAARIKKFAIYRWDPDKPGDKPRMQTYEVDLN 68
>ZFIN|ZDB-GENE-030131-8005 [details] [associations]
symbol:sdhb "succinate dehydrogenase complex,
subunit B, iron sulfur (Ip)" species:7955 "Danio rerio" [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA;ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
ZFIN:ZDB-GENE-030131-8005 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 OMA:WSADSRD
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:BC142799 IPI:IPI00511258 RefSeq:NP_001092210.1
UniGene:Dr.75182 ProteinModelPortal:A5PL98 SMR:A5PL98 STRING:A5PL98
PRIDE:A5PL98 Ensembl:ENSDART00000062264 GeneID:562149
KEGG:dre:562149 NextBio:20884271 Bgee:A5PL98 Uniprot:A5PL98
Length = 280
Score = 707 (253.9 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 126/163 (77%), Positives = 147/163 (90%)
Query: 150 NKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSL 207
NKID N KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L++ D+ G QYLQS+
Sbjct: 114 NKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDESQQGKQQYLQSV 173
Query: 208 DDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQL 267
+DR+KLDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ T DRL++L
Sbjct: 174 EDRQKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEDRLSKL 233
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
+DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK++ +KD
Sbjct: 234 QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMVTYKQKD 276
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 74/87 (85%), Positives = 80/87 (91%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNEMD TLTFRRSCREGICGSCAMNI G NTLAC++KID N KV+KIYPL
Sbjct: 70 MVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVTKIYPL 129
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPDM+NFYAQYKSI+ +L
Sbjct: 130 PHMYVVKDLVPDMSNFYAQYKSIEPYL 156
Score = 196 (74.1 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A L+KID N KV+KIYPLPHMYVVKDLVPDM+NFYAQYKSI+P+L +
Sbjct: 107 GNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 158
Score = 114 (45.2 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 109 AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
A ++A PA +P + K F IYRW+PD +KP MQ Y++DLN
Sbjct: 26 AQTAAAPAAQP-RIKKFQIYRWDPDTVGDKPRMQTYEIDLN 65
>RGD|1308598 [details] [associations]
symbol:Sdhb "succinate dehydrogenase complex, subunit B, iron
sulfur (Ip)" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS;IDA] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISO;ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0006105 "succinate
metabolic process" evidence=IMP] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IMP] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0022904 "respiratory
electron transport chain" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 RGD:1308598 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0022904 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:CH473968 EMBL:BC158620 EMBL:DQ403001 IPI:IPI00785564
PIR:B32394 RefSeq:NP_001094009.1 UniGene:Rn.3902
ProteinModelPortal:P21913 SMR:P21913 STRING:P21913
PhosphoSite:P21913 PRIDE:P21913 Ensembl:ENSRNOT00000010593
GeneID:298596 KEGG:rno:298596 UCSC:RGD:1308598 InParanoid:Q0QEZ3
SABIO-RK:P21913 NextBio:644032 Genevestigator:P21913
GermOnline:ENSRNOG00000007967 Uniprot:P21913
Length = 282
Score = 687 (246.9 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 121/161 (75%), Positives = 146/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 118 RIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 177
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRDE T +RL +L+
Sbjct: 178 DREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQ 237
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 238 DPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 278
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/87 (80%), Positives = 78/87 (89%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 180 (68.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 34/52 (65%), Positives = 42/52 (80%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
Score = 127 (49.8 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 26/53 (49%), Positives = 30/53 (56%)
Query: 97 TAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
TA Q A + A + KTFAIYRW+PDK +KP MQ YKVDLN
Sbjct: 16 TALGRVGLQFQACREAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLN 68
>UNIPROTKB|F1NNF7 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0016491 GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP GeneTree:ENSGT00390000013558
IPI:IPI00580009 EMBL:AADN02040962 RefSeq:XP_003642553.1
Ensembl:ENSGALT00000000694 GeneID:100859720 KEGG:gga:100859720
Uniprot:F1NNF7
Length = 290
Score = 690 (248.0 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 122/161 (75%), Positives = 145/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 126 KIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIE 185
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+
Sbjct: 186 DRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQ 245
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 246 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 286
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 70/87 (80%), Positives = 77/87 (88%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K +KIYPL
Sbjct: 81 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPL 140
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 141 PHMYVVKDLVPDLSNFYAQYKSIEPYL 167
Score = 176 (67.0 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 118 GNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 169
Score = 120 (47.3 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 81 SIQRHLGGPWKIL--GTLTAKNIRSFQ-LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDE 137
S++R G P + L G + + + Q + A +A A ++ K F+IYRW+PDKP +
Sbjct: 9 SLRR--GVPARFLRAGLRPVRGLEAVQGICRGAQTAAAAT--SRIKKFSIYRWDPDKPGD 64
Query: 138 KPTMQEYKVDLN 149
KP MQ Y+VDLN
Sbjct: 65 KPRMQTYEVDLN 76
>UNIPROTKB|Q3T189 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0048039 "ubiquinone binding" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP EMBL:BC102067 IPI:IPI00693011
RefSeq:NP_001035573.1 UniGene:Bt.13128 ProteinModelPortal:Q3T189
SMR:Q3T189 IntAct:Q3T189 STRING:Q3T189 PRIDE:Q3T189
Ensembl:ENSBTAT00000010949 GeneID:286840 KEGG:bta:286840 CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 InParanoid:Q3T189
OrthoDB:EOG4T4CW4 NextBio:20806491 ArrayExpress:Q3T189
Uniprot:Q3T189
Length = 280
Score = 689 (247.6 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 121/161 (75%), Positives = 146/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 116 RIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIE 175
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 176 DREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 235
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 236 DPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 71/87 (81%), Positives = 78/87 (89%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 186 (70.5 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 35/52 (67%), Positives = 42/52 (80%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Score = 120 (47.3 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 105 QLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
+L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 22 RLQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNN 67
>UNIPROTKB|Q007T0 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0048039 "ubiquinone binding" evidence=IDA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0022900 "electron transport
chain" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 PDB:1ZOY PDB:1ZP0 PDB:3ABV
PDB:3AE1 PDB:3AE2 PDB:3AE3 PDB:3AE4 PDB:3AE5 PDB:3AE6 PDB:3AE7
PDB:3AE8 PDB:3AE9 PDB:3AEA PDB:3AEB PDB:3AEC PDB:3AED PDB:3AEE
PDB:3AEF PDB:3AEG PDB:3SFD PDB:3SFE PDBsum:1ZOY PDBsum:1ZP0
PDBsum:3ABV PDBsum:3AE1 PDBsum:3AE2 PDBsum:3AE3 PDBsum:3AE4
PDBsum:3AE5 PDBsum:3AE6 PDBsum:3AE7 PDBsum:3AE8 PDBsum:3AE9
PDBsum:3AEA PDBsum:3AEB PDBsum:3AEC PDBsum:3AED PDBsum:3AEE
PDBsum:3AEF PDBsum:3AEG PDBsum:3SFD PDBsum:3SFE GO:GO:0048039
GO:GO:0008177 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
HOVERGEN:HBG005483 EMBL:DQ915498 EMBL:DQ403018
RefSeq:NP_001098423.1 UniGene:Ssc.55804 ProteinModelPortal:Q007T0
SMR:Q007T0 PRIDE:Q007T0 GeneID:414412 KEGG:ssc:414412
EvolutionaryTrace:Q007T0 Uniprot:Q007T0
Length = 280
Score = 689 (247.6 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 121/161 (75%), Positives = 146/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 116 RIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 175
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 176 EREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 235
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCT TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 236 DPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 72/87 (82%), Positives = 79/87 (90%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N DKVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLDKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 192 (72.6 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 36/52 (69%), Positives = 43/52 (82%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N DKVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Score = 119 (46.9 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 23 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNN 67
>MGI|MGI:1914930 [details] [associations]
symbol:Sdhb "succinate dehydrogenase complex, subunit B,
iron sulfur (Ip)" species:10090 "Mus musculus" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;IDA] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=IDA] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA] [GO:0006105 "succinate metabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=ISO]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0022904 "respiratory electron transport chain" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 MGI:MGI:1914930 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0022904 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:AK003052 EMBL:AK003533 EMBL:AK009660 EMBL:AK153045
EMBL:AK169252 EMBL:BC013509 EMBL:BC051934 IPI:IPI00338536
PIR:PT0094 RefSeq:NP_075863.2 UniGene:Mm.246965
ProteinModelPortal:Q9CQA3 SMR:Q9CQA3 IntAct:Q9CQA3 STRING:Q9CQA3
PhosphoSite:Q9CQA3 REPRODUCTION-2DPAGE:Q9CQA3 PaxDb:Q9CQA3
PRIDE:Q9CQA3 Ensembl:ENSMUST00000010007 GeneID:67680 KEGG:mmu:67680
InParanoid:Q9CQA3 ChiTaRS:SDHB NextBio:325239 Bgee:Q9CQA3
Genevestigator:Q9CQA3 GermOnline:ENSMUSG00000009863 Uniprot:Q9CQA3
Length = 282
Score = 688 (247.2 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 121/161 (75%), Positives = 146/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 118 RIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 177
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 178 DREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 237
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFSVYRCHTIMNCT+TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 238 DPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMATYKEK 278
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 70/87 (80%), Positives = 78/87 (89%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID + KVSKIYPL
Sbjct: 73 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 132
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYL 159
Score = 181 (68.8 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 34/52 (65%), Positives = 42/52 (80%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID + KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 110 GNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
Score = 120 (47.3 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 81 SIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPT 140
S++R G P +LG + + FQ A +A A P + K FAIYRW+PDK +KP
Sbjct: 8 SLKR--GFPAAVLGRVGLQ----FQACRGAQTAAAAA-P-RIKKFAIYRWDPDKTGDKPR 59
Query: 141 MQEYKVDLN 149
MQ Y+VDLN
Sbjct: 60 MQTYEVDLN 68
>UNIPROTKB|P21912 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0006105
"succinate metabolic process" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS;TAS] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=TAS]
[GO:0022904 "respiratory electron transport chain" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] Reactome:REACT_111217
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0044281 GO:GO:0009055 GO:GO:0046872
EMBL:CH471134 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 DrugBank:DB00139 EMBL:AL049569 GO:GO:0022904
GO:GO:0005749 MIM:606864 Orphanet:97286 Orphanet:29072
GO:GO:0048039 GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP CTD:6390 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:U17248 EMBL:U17886 EMBL:U17296 EMBL:U17880 EMBL:U17881
EMBL:U17882 EMBL:U17883 EMBL:U17884 EMBL:U17885 EMBL:AK312056
EMBL:BC007840 EMBL:D10245 EMBL:M32246 IPI:IPI00294911 PIR:I38895
RefSeq:NP_002991.2 UniGene:Hs.465924 ProteinModelPortal:P21912
SMR:P21912 IntAct:P21912 STRING:P21912 PhosphoSite:P21912
DMDM:20455488 UCD-2DPAGE:P21912 PaxDb:P21912 PeptideAtlas:P21912
PRIDE:P21912 DNASU:6390 Ensembl:ENST00000375499 GeneID:6390
KEGG:hsa:6390 UCSC:uc001bae.3 GeneCards:GC01M017345 HGNC:HGNC:10681
HPA:CAB009822 HPA:HPA002867 HPA:HPA002868 MIM:115310 MIM:171300
MIM:185470 MIM:612359 neXtProt:NX_P21912 Orphanet:201
PharmGKB:PA35606 InParanoid:P21912 PhylomeDB:P21912
BioCyc:MetaCyc:ENSG00000117118-MONOMER GenomeRNAi:6390
NextBio:24824 ArrayExpress:P21912 Bgee:P21912 CleanEx:HS_SDHB
Genevestigator:P21912 GermOnline:ENSG00000117118 Uniprot:P21912
Length = 280
Score = 691 (248.3 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 121/161 (75%), Positives = 147/161 (91%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 116 RIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 175
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 176 EREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 235
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 236 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 187 (70.9 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Score = 116 (45.9 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 96 LTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
L A + L A+ + A + K FAIYRW+PDK +KP MQ Y+VDLN
Sbjct: 13 LPATTLGGACLQASRGAQTAAATAPRIKKFAIYRWDPDKAGDKPHMQTYEVDLN 66
>UNIPROTKB|Q9YHT2 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA;TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
Reactome:REACT_115655 InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0044281 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0022900
GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 PDB:1YQ3 PDB:1YQ4 PDB:2FBW PDB:2H88 PDB:2H89 PDB:2WQY
PDBsum:1YQ3 PDBsum:1YQ4 PDBsum:2FBW PDBsum:2H88 PDBsum:2H89
PDBsum:2WQY eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390 HOVERGEN:HBG005483
OrthoDB:EOG4T4CW4 EMBL:AF095937 IPI:IPI00580009
RefSeq:NP_001074344.1 ProteinModelPortal:Q9YHT2 SMR:Q9YHT2
STRING:Q9YHT2 PRIDE:Q9YHT2 GeneID:770063 KEGG:gga:770063
InParanoid:Q9YHT2 EvolutionaryTrace:Q9YHT2 NextBio:20920287
Uniprot:Q9YHT2
Length = 290
Score = 690 (248.0 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 122/161 (75%), Positives = 145/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 126 KIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIE 185
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL QL+
Sbjct: 186 DRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQ 245
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++ +K
Sbjct: 246 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEK 286
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 70/87 (80%), Positives = 77/87 (88%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC KID + K +KIYPL
Sbjct: 81 MVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPL 140
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYVVKDLVPD++NFYAQYKSI+ +L
Sbjct: 141 PHMYVVKDLVPDLSNFYAQYKSIEPYL 167
Score = 176 (67.0 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A KID + K +KIYPLPHMYVVKDLVPD++NFYAQYKSI+P+L +
Sbjct: 118 GNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 169
Score = 117 (46.2 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
R Q +AAA+S + K F+IYRW+PDKP +KP MQ Y+VDLN
Sbjct: 37 RGAQTAAAATSRI--------KKFSIYRWDPDKPGDKPRMQTYEVDLN 76
>UNIPROTKB|F1Q3W8 [details] [associations]
symbol:SDHB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0016491
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0005749 KO:K00235
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 EMBL:AAEX03001846 EMBL:AAEX03001845
RefSeq:NP_001239146.1 Ensembl:ENSCAFT00000025080 GeneID:478217
KEGG:cfa:478217 Uniprot:F1Q3W8
Length = 280
Score = 693 (249.0 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 121/156 (77%), Positives = 144/156 (92%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 116 RIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 175
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
DR+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 176 DREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 235
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
DPFS+YRCHTIMNCTRTCPKGLNPG+AIAEIKK+++
Sbjct: 236 DPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMA 271
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 71/87 (81%), Positives = 78/87 (89%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 186 (70.5 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 35/52 (67%), Positives = 42/52 (80%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Score = 113 (44.8 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
L A + A + K FAIYRW+PDK +KP MQ Y++DLN
Sbjct: 23 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLN 66
>UNIPROTKB|I3LDC1 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0016491 GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
GeneTree:ENSGT00390000013558 EMBL:FP565627
Ensembl:ENSSSCT00000027692 Uniprot:I3LDC1
Length = 280
Score = 684 (245.8 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 120/161 (74%), Positives = 146/161 (90%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLD 208
+ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L++ D+ G QYLQS++
Sbjct: 116 RIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIE 175
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R+KLDGLYECILCACCSTSCPSYWWNG+KYLGPAVLMQAYRW+IDSRD+ T +RL +L+
Sbjct: 176 EREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQ 235
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKK 309
DPFS+YRCHTIMNCT TCPKGLNPG+AIAEIKK+++ +K
Sbjct: 236 DPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIKKMMATYKEK 276
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC +ID N +KVSKIYPL
Sbjct: 71 MVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPL 130
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHMYV+KDLVPD++NFYAQYKSI+ +L
Sbjct: 131 PHMYVIKDLVPDLSNFYAQYKSIEPYL 157
Score = 187 (70.9 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 313 GLDTAALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G A +ID N +KVSKIYPLPHMYV+KDLVPD++NFYAQYKSI+P+L +
Sbjct: 108 GNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Score = 119 (46.9 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 106 LSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
L A + A + K FAIYRW+PDK +KP MQ Y++DLNN
Sbjct: 23 LQACRGAQTAAATAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNN 67
>FB|FBgn0030975 [details] [associations]
symbol:CG7349 species:7227 "Drosophila melanogaster"
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0016491
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 eggNOG:COG0479 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 HSSP:P07014 EMBL:AY089563
ProteinModelPortal:Q8SXL9 SMR:Q8SXL9 STRING:Q8SXL9 PaxDb:Q8SXL9
PRIDE:Q8SXL9 FlyBase:FBgn0030975 InParanoid:Q8SXL9
OrthoDB:EOG41JWTV ArrayExpress:Q8SXL9 Bgee:Q8SXL9 Uniprot:Q8SXL9
Length = 437
Score = 672 (241.6 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 123/173 (71%), Positives = 139/173 (80%)
Query: 150 NKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD--KENIGNAQYLQS 206
+ ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWLQR K G AQYLQS
Sbjct: 260 SSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQRKDLKREAGTAQYLQS 319
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
+DDR LDGLYECILCACC TSCPSYWWN KYLGPAVLMQAYRW+IDSRDE T RL+
Sbjct: 320 VDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVLMQAYRWVIDSRDEATEQRLDF 379
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAAL 319
LKDP+ +YRCH+IMNCT TCPK LNP RAI ++K+LL GL KK KP L T AL
Sbjct: 380 LKDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLKQLLVGLKKKGKPQLKTDAL 432
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 70/91 (76%), Positives = 77/91 (84%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI G NTLAC+S ID N+ K +IYPL
Sbjct: 216 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPL 275
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PH+YVV+DLVPDM+ FY QY+SIQ PW
Sbjct: 276 PHLYVVRDLVPDMSQFYDQYRSIQ-----PW 301
Score = 172 (65.6 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A + ID N+ K +IYPLPH+YVV+DLVPDM+ FY QY+SIQPWL R
Sbjct: 252 GTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWLQR 304
Score = 87 (35.7 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 110 ASSAVPAE-KPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
A SA P + K + KTF IYRW KP ++P Q Y+VDL
Sbjct: 174 AKSAPPVKAKKQRLKTFEIYRW---KPGDQPQTQTYEVDL 210
>SGD|S000003964 [details] [associations]
symbol:SDH2 "Iron-sulfur protein subunit of succinate
dehydrogenase" species:4932 "Saccharomyces cerevisiae" [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA;IGI;IMP;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;IMP] [GO:0045333 "cellular respiration"
evidence=IGI;IMP] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] [GO:0051538 "3 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 SGD:S000003964 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
EMBL:BK006945 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0008177
PDB:1ORZ PDB:1PB4 PDBsum:1ORZ PDBsum:1PB4 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 OrthoDB:EOG4PRX0W
EMBL:J05487 EMBL:Z73146 EMBL:AY558189 PIR:A35435 RefSeq:NP_013059.1
ProteinModelPortal:P21801 SMR:P21801 DIP:DIP-5856N IntAct:P21801
MINT:MINT-695166 STRING:P21801 PaxDb:P21801 PeptideAtlas:P21801
EnsemblFungi:YLL041C GeneID:850685 KEGG:sce:YLL041C CYGD:YLL041c
NextBio:966692 Genevestigator:P21801 GermOnline:YLL041C
Uniprot:P21801
Length = 266
Score = 627 (225.8 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 114/155 (73%), Positives = 128/155 (82%)
Query: 151 KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDD 209
KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+LQR + LQS++D
Sbjct: 110 KIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSFPKDGTEVLQSIED 169
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
RKKLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRW+IDSRD+ T R L +
Sbjct: 170 RKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYRWLIDSRDQATKTRKAMLNN 229
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
S+YRCHTIMNCTRTCPKGLNPG AIAEIKK L+
Sbjct: 230 SMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 69/87 (79%), Positives = 76/87 (87%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIK+E D TLTFRRSCREGICGSCAMNIGG NTLACI KID N+ K KIYPL
Sbjct: 65 MVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQLKIYPL 124
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM++VKDLVPD+ NFY QYKSIQ +L
Sbjct: 125 PHMFIVKDLVPDLTNFYQQYKSIQPYL 151
Score = 178 (67.7 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRS 364
G +T A + KID N+ K KIYPLPHM++VKDLVPD+ NFY QYKSIQP+L RS
Sbjct: 101 GRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRS 154
Score = 124 (48.7 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 108 AAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
A A++A P + KTF +YRWNPD+P KP +Q Y+VDLN+
Sbjct: 20 ATATTAAATHTP-RLKTFKVYRWNPDEPSAKPHLQSYQVDLND 61
>CGD|CAL0000978 [details] [associations]
symbol:SDH2 species:5476 "Candida albicans" [GO:0030445
"yeast-form cell wall" evidence=IDA] [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 CGD:CAL0000978
Prosite:PS00198 GO:GO:0009986 GO:GO:0030445 GO:GO:0009055
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AACQ01000173 EMBL:AACQ01000172 RefSeq:XP_711983.1
RefSeq:XP_712003.1 ProteinModelPortal:Q59QN7 SMR:Q59QN7
STRING:Q59QN7 GeneID:3646378 GeneID:3646397 KEGG:cal:CaO19.637
KEGG:cal:CaO19.8251 Uniprot:Q59QN7
Length = 263
Score = 610 (219.8 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 107/155 (69%), Positives = 131/155 (84%)
Query: 151 KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDD 209
+ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+LQR+ + LQS++D
Sbjct: 107 RIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQRESNPADGRENLQSIED 166
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
R KLDGLYECILCACCSTSCPSYWWN ++YLGPAVLMQAYRW+IDSRD+ TA+R L++
Sbjct: 167 RAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVLMQAYRWLIDSRDQATANRKAMLQN 226
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
S+YRCHTIMNC RTCPKGLNPG+AIAEIKK L+
Sbjct: 227 SMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 261
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 63/87 (72%), Positives = 75/87 (86%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ +ID ++ K K+YPL
Sbjct: 62 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 122 PHMFVVRDLVPDLTHFYKQYKSIEPYL 148
Score = 156 (60.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A L +ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 98 GRNTLACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQR 150
Score = 127 (49.8 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
++ Q S + + AEK + K F IYRWNPD P+ +P MQ Y+VDLN
Sbjct: 10 KAVQFSVRSLATAAAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLN 57
>UNIPROTKB|Q59QN7 [details] [associations]
symbol:SDH2 "Putative uncharacterized protein SDH2"
species:237561 "Candida albicans SC5314" [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0009986 "cell surface"
evidence=IDA] [GO:0030445 "yeast-form cell wall" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 CGD:CAL0000978 Prosite:PS00198
GO:GO:0009986 GO:GO:0030445 GO:GO:0009055 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AACQ01000173 EMBL:AACQ01000172 RefSeq:XP_711983.1
RefSeq:XP_712003.1 ProteinModelPortal:Q59QN7 SMR:Q59QN7
STRING:Q59QN7 GeneID:3646378 GeneID:3646397 KEGG:cal:CaO19.637
KEGG:cal:CaO19.8251 Uniprot:Q59QN7
Length = 263
Score = 610 (219.8 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 107/155 (69%), Positives = 131/155 (84%)
Query: 151 KIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDD 209
+ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+LQR+ + LQS++D
Sbjct: 107 RIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQRESNPADGRENLQSIED 166
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
R KLDGLYECILCACCSTSCPSYWWN ++YLGPAVLMQAYRW+IDSRD+ TA+R L++
Sbjct: 167 RAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVLMQAYRWLIDSRDQATANRKAMLQN 226
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
S+YRCHTIMNC RTCPKGLNPG+AIAEIKK L+
Sbjct: 227 SMSLYRCHTIMNCARTCPKGLNPGKAIAEIKKQLA 261
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 63/87 (72%), Positives = 75/87 (86%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
MVLDAL+KIKNE D TLT RRSCREGICGSCAMNIGG NTLAC+ +ID ++ K K+YPL
Sbjct: 62 MVLDALLKIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPL 121
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PHM+VV+DLVPD+ +FY QYKSI+ +L
Sbjct: 122 PHMFVVRDLVPDLTHFYKQYKSIEPYL 148
Score = 156 (60.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A L +ID ++ K K+YPLPHM+VV+DLVPD+ +FY QYKSI+P+L R
Sbjct: 98 GRNTLACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQR 150
Score = 127 (49.8 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 102 RSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
++ Q S + + AEK + K F IYRWNPD P+ +P MQ Y+VDLN
Sbjct: 10 KAVQFSVRSLATAAAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLN 57
>UNIPROTKB|A8WPF0 [details] [associations]
symbol:sdhb-1 "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:6238 "Caenorhabditis
briggsae" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 EMBL:HE600951 STRING:A8WPF0
EnsemblMetazoa:CBG00872 WormBase:CBG00872 Uniprot:A8WPF0
Length = 282
Score = 626 (225.4 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 113/170 (66%), Positives = 136/170 (80%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLD 208
KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+Q+ +G Q QS+
Sbjct: 114 KIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVA 173
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ +RL+++
Sbjct: 174 ERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWVIDSRDDYAQERLHRMH 233
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+G K KP + +A
Sbjct: 234 DSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTGF--KSKPAAEPSA 281
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 74/91 (81%), Positives = 79/91 (86%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KIDA+ K +KIYPL
Sbjct: 69 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPL 128
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 129 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 154
Score = 178 (67.7 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 317 AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A + KIDA+ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 110 ACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 157
Score = 105 (42.0 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
++ A++A P + + KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 22 ASGAAAAQPKKTGNRIKTFEIYRFNPEAPGAKPTIQKFDVDLD 64
>POMBASE|SPAC140.01 [details] [associations]
symbol:sdh2 "succinate dehydrogenase (ubiquinone)
iron-sulfur protein subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
PomBase:SPAC140.01 Prosite:PS00198 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0006121 GO:GO:0008177 GO:GO:0006105
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 PIR:D32394 PIR:T37633 RefSeq:NP_593530.2
STRING:P21911 PRIDE:P21911 EnsemblFungi:SPAC140.01.1 GeneID:2542842
OrthoDB:EOG4PRX0W NextBio:20803883 Uniprot:P21911
Length = 275
Score = 602 (217.0 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 108/154 (70%), Positives = 128/154 (83%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIG-NAQYLQSLDDR 210
I ++K +KIYPLPH ++VKDLVPD+ FY QYKSI+PWLQ D NI + ++ QS DR
Sbjct: 122 IKKDNKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQND--NIPKDKEFYQSRADR 179
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
KLDGLYECILCACCSTSCPSYWWN E+YLGPAVLMQAYRWIIDSRD+ TA RL+ +++
Sbjct: 180 AKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWIIDSRDQATAKRLDVMQNS 239
Query: 271 FSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
SVYRCHTIMNC RTCPKGLNPG AIA++K L++
Sbjct: 240 MSVYRCHTIMNCARTCPKGLNPGLAIAKVKALMA 273
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 66/90 (73%), Positives = 73/90 (81%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNE DPTLTFRRSCREGICGSCAMNI G NTLACI I ++K +KIYPLP
Sbjct: 76 MVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKIYPLP 135
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
H ++VKDLVPD+ FY QYKSI+ PW
Sbjct: 136 HCFIVKDLVPDLTYFYKQYKSIE-----PW 160
Score = 156 (60.0 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A + I ++K +KIYPLPH ++VKDLVPD+ FY QYKSI+PWL
Sbjct: 112 GSNTLACICNIKKDNKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWL 161
Score = 124 (48.7 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 99 KNIRSFQLSA--AASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
+N R A +A+SA P + KTF IYRWNP+KP+ KP +Q+Y VDL
Sbjct: 19 RNARMMATEANISATSANPQSQGENLKTFEIYRWNPEKPEVKPKLQKYTVDL 70
>ASPGD|ASPL0000047708 [details] [associations]
symbol:AN2332 species:162425 "Emericella nidulans"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA;RCA]
[GO:0000104 "succinate dehydrogenase activity" evidence=RCA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IEA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 EMBL:BN001307 GO:GO:0016491 GO:GO:0006099
EMBL:AACD01000038 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP OrthoDB:EOG4PRX0W RefSeq:XP_659936.1
ProteinModelPortal:Q5BAU8 SMR:Q5BAU8 STRING:Q5BAU8
EnsemblFungi:CADANIAT00009027 GeneID:2875591 KEGG:ani:AN2332.2
Uniprot:Q5BAU8
Length = 273
Score = 597 (215.2 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 103/148 (69%), Positives = 124/148 (83%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K S+IYPLPH YVVKDLVPD+ Y QYKSI+P+LQRD + + QS +DRKKLDGL
Sbjct: 124 KESRIYPLPHTYVVKDLVPDLTQIYKQYKSIKPYLQRDTKTEDGLENRQSPEDRKKLDGL 183
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECILC CCSTSCPSYWWN E+YLGPA+L+Q+YRW+ DSRD+KTA+R + + + SVYRC
Sbjct: 184 YECILCFCCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQKTAERKHAIDNSMSVYRC 243
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
HTI+NCTRTCPKGLNP RAI+EIKK+L+
Sbjct: 244 HTILNCTRTCPKGLNPARAISEIKKMLA 271
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 64/87 (73%), Positives = 74/87 (85%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAND-KVSKIYPL 59
M+LDALI+IKNE+DPTLTFRRSCREGICGSCAMNI GVNTLAC+ +I + K S+IYPL
Sbjct: 72 MMLDALIRIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPL 131
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PH YVVKDLVPD+ Y QYKSI+ +L
Sbjct: 132 PHTYVVKDLVPDLTQIYKQYKSIKPYL 158
Score = 148 (57.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 313 GLDT-AALHKIDAND-KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G++T A L +I + K S+IYPLPH YVVKDLVPD+ Y QYKSI+P+L R
Sbjct: 108 GVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTQIYKQYKSIKPYLQR 160
Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 40/112 (35%), Positives = 54/112 (48%)
Query: 52 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLT-------AKNIRSF 104
K S+IYPLPH YVVKDLVPD+ Y QYKSI+ +L K L K +
Sbjct: 124 KESRIYPLPHTYVVKDLVPDLTQIYKQYKSIKPYLQRDTKTEDGLENRQSPEDRKKLDGL 183
Query: 105 Q---LSAAASSAVPAE--KPAKYKTFAI----YRWNPDKPDEKPTMQEYKVD 147
L S++ P+ +Y AI YRW D D+K +++ +D
Sbjct: 184 YECILCFCCSTSCPSYWWNSEEYLGPAILLQSYRWLADSRDQKTAERKHAID 235
Score = 119 (46.9 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 116 AEKPA-KYKTFAIYRWNPDKPDEKPTMQEYKVDL 148
A++PA + K F +YRWNPDKP EKP MQ Y++DL
Sbjct: 33 AQEPAPQMKKFQVYRWNPDKPSEKPKMQTYELDL 66
>WB|WBGene00006433 [details] [associations]
symbol:sdhb-1 species:6239 "Caenorhabditis elegans"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0009055 GO:GO:0046872
GO:GO:0010171 GO:GO:0000003 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0048039 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 EMBL:AB008569 EMBL:Z47809
PIR:T22083 PIR:T37260 RefSeq:NP_495992.1 ProteinModelPortal:Q09545
SMR:Q09545 STRING:Q09545 PaxDb:Q09545 EnsemblMetazoa:F42A8.2.1
EnsemblMetazoa:F42A8.2.2 GeneID:174482 KEGG:cel:CELE_F42A8.2
CTD:174482 WormBase:F42A8.2 InParanoid:Q09545 NextBio:884224
ArrayExpress:Q09545 Uniprot:Q09545
Length = 298
Score = 619 (223.0 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 111/170 (65%), Positives = 135/170 (79%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLD 208
KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+Q+ +G Q QS+
Sbjct: 130 KIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVA 189
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ +RL+++
Sbjct: 190 ERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWVIDSRDDYATERLHRMH 249
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+G K P + +A
Sbjct: 250 DSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTGFTSK--PAAEPSA 297
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 73/91 (80%), Positives = 79/91 (86%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KID++ K +KIYPL
Sbjct: 85 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPL 144
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 145 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 170
Score = 176 (67.0 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 35/53 (66%), Positives = 43/53 (81%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A + KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 121 GQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 173
Score = 93 (37.8 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
+ KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 52 RIKTFEIYRFNPEAPGAKPTVQKFDVDLD 80
>UNIPROTKB|Q09545 [details] [associations]
symbol:sdhb-1 "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:6239 "Caenorhabditis
elegans" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0009055 GO:GO:0046872
GO:GO:0010171 GO:GO:0000003 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0048039 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 EMBL:AB008569 EMBL:Z47809
PIR:T22083 PIR:T37260 RefSeq:NP_495992.1 ProteinModelPortal:Q09545
SMR:Q09545 STRING:Q09545 PaxDb:Q09545 EnsemblMetazoa:F42A8.2.1
EnsemblMetazoa:F42A8.2.2 GeneID:174482 KEGG:cel:CELE_F42A8.2
CTD:174482 WormBase:F42A8.2 InParanoid:Q09545 NextBio:884224
ArrayExpress:Q09545 Uniprot:Q09545
Length = 298
Score = 619 (223.0 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 111/170 (65%), Positives = 135/170 (79%)
Query: 151 KIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLD 208
KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+Q+ +G Q QS+
Sbjct: 130 KIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVA 189
Query: 209 DRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
+R +LDGLYECILCACCSTSCPSYWWN +KYLGPAVLMQAYRW+IDSRD+ +RL+++
Sbjct: 190 ERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWVIDSRDDYATERLHRMH 249
Query: 269 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGLDTAA 318
D FS ++CHTIMNCT+TCPK LNP +AI EIK LL+G K P + +A
Sbjct: 250 DSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLTGFTSK--PAAEPSA 297
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 73/91 (80%), Positives = 79/91 (86%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
M+LDALIKIKNE+DPTLTFRRSCREGICGSCAMNIGG NTLACI KID++ K +KIYPL
Sbjct: 85 MILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPL 144
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHM+VVKDLVPDMN FYAQY SIQ PW
Sbjct: 145 PHMFVVKDLVPDMNLFYAQYASIQ-----PW 170
Score = 176 (67.0 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 35/53 (66%), Positives = 43/53 (81%)
Query: 313 GLDT-AALHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
G +T A + KID++ K +KIYPLPHM+VVKDLVPDMN FYAQY SIQPW+ +
Sbjct: 121 GQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 173
Score = 93 (37.8 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 121 KYKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
+ KTF IYR+NP+ P KPT+Q++ VDL+
Sbjct: 52 RIKTFEIYRFNPEAPGAKPTVQKFDVDLD 80
>TAIR|locus:2168818 [details] [associations]
symbol:SDH2-2 "succinate dehydrogenase 2-2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0008270
GO:GO:0006099 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:AB009052 GO:GO:0005749 GO:GO:0000104
GO:GO:0006121 GO:GO:0008177 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 ProtClustDB:PLN00129 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AJ278911 EMBL:AY074299 EMBL:AY123036 EMBL:AY087504
IPI:IPI00523799 RefSeq:NP_198881.1 UniGene:At.20145
UniGene:At.67187 UniGene:At.7421 ProteinModelPortal:Q8LB02
SMR:Q8LB02 IntAct:Q8LB02 STRING:Q8LB02 PaxDb:Q8LB02 PRIDE:Q8LB02
EnsemblPlants:AT5G40650.1 GeneID:834065 KEGG:ath:AT5G40650
GeneFarm:2169 TAIR:At5g40650 InParanoid:Q8LB02 OMA:NCSRTCP
PhylomeDB:Q8LB02 Genevestigator:Q8LB02 GermOnline:AT5G40650
Uniprot:Q8LB02
Length = 280
Score = 558 (201.5 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 98/153 (64%), Positives = 117/153 (76%)
Query: 151 KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR-DKENIGNAQYLQSLDD 209
KI++ K + I PLPHM+V+KDLV DM NFY QYKSI+PWL+R + ++ + LQS D
Sbjct: 124 KIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQSKKD 183
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
R KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE T +RL + D
Sbjct: 184 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDD 243
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
F +YRCHTI+NC R CPKGLNPG+ I IK+L
Sbjct: 244 EFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 65/90 (72%), Positives = 74/90 (82%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI++ K + I PLP
Sbjct: 79 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLP 138
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM+V+KDLV DM NFY QYKSI+ PW
Sbjct: 139 HMFVIKDLVVDMTNFYNQYKSIE-----PW 163
Score = 162 (62.1 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 30/47 (63%), Positives = 36/47 (76%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI++ K + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 120 ACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 166
Score = 112 (44.5 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 107 SAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
S A S A A KTF IYRWNPD P KP +Q+YK+DL +
Sbjct: 33 SEAQSKASTGGGGASLKTFQIYRWNPDNPG-KPELQDYKIDLKD 75
>TIGR_CMR|ECH_0316 [details] [associations]
symbol:ECH_0316 "succinate dehydrogenase and fumarate
reductase iron-sulfur protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_507137.1 ProteinModelPortal:Q2GHE6 SMR:Q2GHE6
STRING:Q2GHE6 GeneID:3927401 KEGG:ech:ECH_0316 PATRIC:20576135
OMA:MVQFSLP BioCyc:ECHA205920:GJNR-316-MONOMER Uniprot:Q2GHE6
Length = 258
Score = 590 (212.7 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 97/143 (67%), Positives = 123/143 (86%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
IYPLPHM+V+KDLVPD++NFY QY+S+ PW+Q ++ N N + LQ+++DR KLDG+Y+CI
Sbjct: 114 IYPLPHMHVIKDLVPDLSNFYKQYESVTPWIQAEEPN-HNKERLQTIEDRSKLDGIYDCI 172
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPSYWWN +KYLGPA L+QAYRW+IDSRDE + RL+ L D F +YRCHTIM
Sbjct: 173 LCACCSTSCPSYWWNSDKYLGPAALLQAYRWLIDSRDEASDSRLDVLDDAFKLYRCHTIM 232
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NCT+TCPKGLNP +AIA IK+++
Sbjct: 233 NCTKTCPKGLNPAKAIAHIKQMM 255
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 62/83 (74%), Positives = 70/83 (84%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G NTLAC I D V+ IYPL
Sbjct: 59 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVN-IYPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSI 82
PHM+V+KDLVPD++NFY QY+S+
Sbjct: 118 PHMHVIKDLVPDLSNFYKQYESV 140
Score = 148 (57.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K IYPLPHM+V+KDLVPD++NFY QY+S+ PW+
Sbjct: 95 GTNTLACTKAISDIKSDVNIYPLPHMHVIKDLVPDLSNFYKQYESVTPWI 144
Score = 77 (32.2 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 116 AEKPAK-YKTFAIYRWNPDKPDEKPTMQEYKVDLN 149
A K AK K F IYRW+PD DE P + + +DL+
Sbjct: 21 ARKGAKNVKCFKIYRWSPDD-DENPRIDTFFIDLD 54
>TIGR_CMR|SPO_0361 [details] [associations]
symbol:SPO_0361 "succinate dehydrogenase, iron-sulfur
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
OMA:LIVDMEP RefSeq:YP_165624.1 ProteinModelPortal:Q5LXE7 SMR:Q5LXE7
GeneID:3196472 KEGG:sil:SPO0361 PATRIC:23373981 Uniprot:Q5LXE7
Length = 259
Score = 593 (213.8 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL+ K N ++ QS++DR+KLDGLYEC
Sbjct: 112 KIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLET-KTNRPAKEWKQSIEDRRKLDGLYEC 170
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
++CA CSTSCPSYWWNG++YLGPA L+ AYRWIIDSRDE T +RL+ L+DPF +YRCHTI
Sbjct: 171 VMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDNLEDPFKLYRCHTI 230
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC +TCPKGLNP +AIAEIKK++
Sbjct: 231 MNCAKTCPKGLNPAKAIAEIKKMM 254
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 66/107 (61%), Positives = 78/107 (72%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALI IKN++D TLTFRRSCREGICGSCAMNI G+NTLACI +D KIYPLP
Sbjct: 58 MVLDALIYIKNKVDATLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLP 117
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
HM VVKDL+PD+ +FYAQ+ SI PW L T T + + ++ S
Sbjct: 118 HMPVVKDLIPDLTHFYAQHASIM-----PW--LETKTNRPAKEWKQS 157
Score = 145 (56.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 313 GLDT-AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G++T A ++ +D KIYPLPHM VVKDL+PD+ +FYAQ+ SI PWL
Sbjct: 94 GINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWL 143
Score = 68 (29.0 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 117 EKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
E + F IYRWNPD + P + Y VD+++
Sbjct: 22 EGATNLRKFQIYRWNPDD-GQNPRVDTYFVDMDD 54
>TAIR|locus:2086716 [details] [associations]
symbol:SDH2-1 "succinate dehydrogenase 2-1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005743 GO:GO:0009055 GO:GO:0046872
GO:GO:0008270 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0006121 GO:GO:0008177
EMBL:AJ278910 EMBL:AB024028 EMBL:AY035013 EMBL:AY063053
EMBL:AY924777 EMBL:AY086901 IPI:IPI00517821 RefSeq:NP_001118718.1
RefSeq:NP_189374.1 UniGene:At.17610 UniGene:At.22540
UniGene:At.32384 UniGene:At.71559 ProteinModelPortal:Q8LBZ7
SMR:Q8LBZ7 IntAct:Q8LBZ7 STRING:Q8LBZ7 PaxDb:Q8LBZ7 PRIDE:Q8LBZ7
EnsemblPlants:AT3G27380.1 EnsemblPlants:AT3G27380.2 GeneID:822359
KEGG:ath:AT3G27380 GeneFarm:2168 TAIR:At3g27380 eggNOG:COG0479
HOGENOM:HOG000160590 InParanoid:Q9LTZ2 KO:K00235 OMA:WSADSRD
PhylomeDB:Q8LBZ7 ProtClustDB:PLN00129 Genevestigator:Q8LBZ7
GermOnline:AT3G27380 GO:GO:0045281 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 Uniprot:Q8LBZ7
Length = 279
Score = 542 (195.9 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 97/153 (63%), Positives = 113/153 (73%)
Query: 151 KIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDD 209
KI + I PLPHM+V+KDLV DM NFY QYKSI+PWL+R ++ + LQS D
Sbjct: 125 KIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKD 184
Query: 210 RKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKD 269
R KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE T +RL + D
Sbjct: 185 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDD 244
Query: 270 PFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 302
F +YRCHTI+NC R CPKGLNPG+ I IK+L
Sbjct: 245 EFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 76/138 (55%), Positives = 88/138 (63%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
MVLDALIKIKNEMDP+LTFRRSCREGICGSCAMNI G N LAC++KI + I PLP
Sbjct: 80 MVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLP 139
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW---KILGTLTAKNI-RSFQLSAAASSAVPA 116
HM+V+KDLV DM NFY QYKSI+ PW K ++ AK I +S + A
Sbjct: 140 HMFVIKDLVVDMTNFYNQYKSIE-----PWLKRKTPASVPAKEILQSKKDRAKLDGMYEC 194
Query: 117 EKPAKYKTFA-IYRWNPD 133
A T Y WNP+
Sbjct: 195 ILCACCSTSCPSYWWNPE 212
Score = 150 (57.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 317 AALHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
A L KI + I PLPHM+V+KDLV DM NFY QYKSI+PWL R
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 167
Score = 98 (39.6 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 123 KTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
KTF IYRWNPD P KP +Q Y++DL +
Sbjct: 50 KTFQIYRWNPDNPG-KPELQNYQIDLKD 76
>TIGR_CMR|APH_0159 [details] [associations]
symbol:APH_0159 "succinate dehydrogenase, iron-sulfur
protein" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0006099
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:MVQFSLP RefSeq:YP_504783.1
RefSeq:YP_504786.1 ProteinModelPortal:Q2GLG8 SMR:Q2GLG8
STRING:Q2GLG8 GeneID:3930311 GeneID:3930807 KEGG:aph:APH_0159
KEGG:aph:APH_0162 PATRIC:20948886
BioCyc:APHA212042:GHPM-194-MONOMER
BioCyc:APHA212042:GHPM-197-MONOMER Uniprot:Q2GLG8
Length = 262
Score = 572 (206.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 97/148 (65%), Positives = 121/148 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KI+PLPHM V+KDLVPD++NFY QYKSI PWL+ D ++LQS++DR KLD +Y+C
Sbjct: 113 KIFPLPHMDVIKDLVPDLSNFYKQYKSISPWLKSDGARSDREEHLQSIEDRSKLDKVYDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +KYLGPA L+Q YRW++DSRD T +RL L+D F +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNPDKYLGPAALLQVYRWLVDSRDTATEERLAFLEDAFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL-SGL 306
MNCT+TCPK LNP +AIA+IK+++ GL
Sbjct: 233 MNCTKTCPKDLNPAKAIAKIKQMMIKGL 260
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 76/139 (54%), Positives = 88/139 (63%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIK+KNE D TLTFRRSCREGICGSCAMNI G NTLAC I D V KI+PL
Sbjct: 59 MVLDALIKVKNEYDSTLTFRRSCREGICGSCAMNIDGTNTLACTKYISDIKGDV-KIFPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAK--NIRSFQLSAAASSAVPA 116
PHM V+KDLVPD++NFY QYKSI PW K G + + +++S + +
Sbjct: 118 PHMDVIKDLVPDLSNFYKQYKSIS-----PWLKSDGARSDREEHLQSIEDRSKLDKVYDC 172
Query: 117 EKPAKYKTFA-IYRWNPDK 134
A T Y WNPDK
Sbjct: 173 ILCACCSTSCPSYWWNPDK 191
Score = 151 (58.2 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K KI+PLPHM V+KDLVPD++NFY QYKSI PWL
Sbjct: 95 GTNTLACTKYISDIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWL 144
Score = 67 (28.6 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVSKIY 162
F IYRW+PD E P + Y +DL+ +DA KV Y
Sbjct: 31 FKIYRWSPDD-GENPRIDTYYIDLDKCGQMVLDALIKVKNEY 71
>TIGR_CMR|APH_0162 [details] [associations]
symbol:APH_0162 "succinate dehydrogenase, iron-sulfur
protein" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0006099
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:MVQFSLP RefSeq:YP_504783.1
RefSeq:YP_504786.1 ProteinModelPortal:Q2GLG8 SMR:Q2GLG8
STRING:Q2GLG8 GeneID:3930311 GeneID:3930807 KEGG:aph:APH_0159
KEGG:aph:APH_0162 PATRIC:20948886
BioCyc:APHA212042:GHPM-194-MONOMER
BioCyc:APHA212042:GHPM-197-MONOMER Uniprot:Q2GLG8
Length = 262
Score = 572 (206.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 97/148 (65%), Positives = 121/148 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
KI+PLPHM V+KDLVPD++NFY QYKSI PWL+ D ++LQS++DR KLD +Y+C
Sbjct: 113 KIFPLPHMDVIKDLVPDLSNFYKQYKSISPWLKSDGARSDREEHLQSIEDRSKLDKVYDC 172
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPSYWWN +KYLGPA L+Q YRW++DSRD T +RL L+D F +YRCHTI
Sbjct: 173 ILCACCSTSCPSYWWNPDKYLGPAALLQVYRWLVDSRDTATEERLAFLEDAFKLYRCHTI 232
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL-SGL 306
MNCT+TCPK LNP +AIA+IK+++ GL
Sbjct: 233 MNCTKTCPKDLNPAKAIAKIKQMMIKGL 260
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 76/139 (54%), Positives = 88/139 (63%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
MVLDALIK+KNE D TLTFRRSCREGICGSCAMNI G NTLAC I D V KI+PL
Sbjct: 59 MVLDALIKVKNEYDSTLTFRRSCREGICGSCAMNIDGTNTLACTKYISDIKGDV-KIFPL 117
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW-KILGTLTAK--NIRSFQLSAAASSAVPA 116
PHM V+KDLVPD++NFY QYKSI PW K G + + +++S + +
Sbjct: 118 PHMDVIKDLVPDLSNFYKQYKSIS-----PWLKSDGARSDREEHLQSIEDRSKLDKVYDC 172
Query: 117 EKPAKYKTFA-IYRWNPDK 134
A T Y WNPDK
Sbjct: 173 ILCACCSTSCPSYWWNPDK 191
Score = 151 (58.2 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 313 GLDTAALHKIDANDKVS-KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K ++ K KI+PLPHM V+KDLVPD++NFY QYKSI PWL
Sbjct: 95 GTNTLACTKYISDIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWL 144
Score = 67 (28.6 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNN----KIDANDKVSKIY 162
F IYRW+PD E P + Y +DL+ +DA KV Y
Sbjct: 31 FKIYRWSPDD-GENPRIDTYYIDLDKCGQMVLDALIKVKNEY 71
>GENEDB_PFALCIPARUM|PFL0630w [details] [associations]
symbol:PFL0630w "iron-sulfur subunit of
succinate dehydrogenase" species:5833 "Plasmodium falciparum"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 EMBL:AE014188 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0008177 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP ProtClustDB:CLSZ2431440
RefSeq:XP_001350535.1 HSSP:P07014 ProteinModelPortal:Q8I5S5
SMR:Q8I5S5 IntAct:Q8I5S5 MINT:MINT-1741055
EnsemblProtists:PFL0630w:mRNA GeneID:811179 KEGG:pfa:PFL0630w
EuPathDB:PlasmoDB:PF3D7_1212800 Uniprot:Q8I5S5
Length = 321
Score = 557 (201.1 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 96/155 (61%), Positives = 122/155 (78%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDG 215
++++I PLP++YV+KDLVPD+ NFY QYKSI PWL+R K+ G ++ QS++DRKKLDG
Sbjct: 150 EITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDG 209
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI+DSRDE T +RL ++ D +YR
Sbjct: 210 LYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDSRDEYTKERLMEVNDTMKLYR 269
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
CH IMNCT CPKGL+P +AI ++K L+ +D
Sbjct: 270 CHGIMNCTMCCPKGLDPAKAIKDMKNLVQENFSED 304
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 62/108 (57%), Positives = 79/108 (73%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K +++I PL
Sbjct: 98 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNRDKKEITEIQPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
P++YV+KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 158 PNLYVMKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQS 200
Score = 151 (58.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 311 KPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K +++I PLP++YV+KDLVPD+ NFY QYKSI PWL R
Sbjct: 135 KNGL--ACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKR 186
Score = 67 (28.6 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
V E + K F+I+R+NP ++P M+ ++VD++N
Sbjct: 59 VNGEVVKRKKKFSIFRYNPTNK-KRPQMETFEVDIDN 94
>UNIPROTKB|Q8I5S5 [details] [associations]
symbol:PFL0630w "Iron-sulfur subunit of succinate
dehydrogenase" species:36329 "Plasmodium falciparum 3D7"
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 EMBL:AE014188 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0008177 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP ProtClustDB:CLSZ2431440
RefSeq:XP_001350535.1 HSSP:P07014 ProteinModelPortal:Q8I5S5
SMR:Q8I5S5 IntAct:Q8I5S5 MINT:MINT-1741055
EnsemblProtists:PFL0630w:mRNA GeneID:811179 KEGG:pfa:PFL0630w
EuPathDB:PlasmoDB:PF3D7_1212800 Uniprot:Q8I5S5
Length = 321
Score = 557 (201.1 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 96/155 (61%), Positives = 122/155 (78%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRD-KENIGNAQYLQSLDDRKKLDG 215
++++I PLP++YV+KDLVPD+ NFY QYKSI PWL+R K+ G ++ QS++DRKKLDG
Sbjct: 150 EITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDG 209
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECI+CA CSTSCPSYWWN E YLGPA LMQAYRWI+DSRDE T +RL ++ D +YR
Sbjct: 210 LYECIMCASCSTSCPSYWWNPEYYLGPATLMQAYRWIVDSRDEYTKERLMEVNDTMKLYR 269
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD 310
CH IMNCT CPKGL+P +AI ++K L+ +D
Sbjct: 270 CHGIMNCTMCCPKGLDPAKAIKDMKNLVQENFSED 304
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 62/108 (57%), Positives = 79/108 (73%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDK-VSKIYPL 59
MVLD LIKIK+E+D TL+FRRSCREGICGSCAMNI G N LAC+++++ + K +++I PL
Sbjct: 98 MVLDVLIKIKDEIDSTLSFRRSCREGICGSCAMNINGKNGLACLTEVNRDKKEITEIQPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLS 107
P++YV+KDLVPD+ NFY QYKSI PW T K + F S
Sbjct: 158 PNLYVMKDLVPDLTNFYNQYKSID-----PWLKRKTKKEKGQKEFYQS 200
Score = 151 (58.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 311 KPGLDTAALHKIDANDK-VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPR 363
K GL A L +++ + K +++I PLP++YV+KDLVPD+ NFY QYKSI PWL R
Sbjct: 135 KNGL--ACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKR 186
Score = 67 (28.6 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 114 VPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
V E + K F+I+R+NP ++P M+ ++VD++N
Sbjct: 59 VNGEVVKRKKKFSIFRYNPTNK-KRPQMETFEVDIDN 94
>TAIR|locus:504954878 [details] [associations]
symbol:SDH2-3 "succinate dehydrogenase 2-3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005743
GO:GO:0009055 GO:GO:0046872 GO:GO:0006099 GO:GO:0051539
GO:GO:0051538 EMBL:AB013395 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 GO:GO:0006121 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 ProtClustDB:PLN00129 GO:GO:0045281
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 EMBL:AJ278912 IPI:IPI00528859
RefSeq:NP_680465.2 UniGene:At.45474 ProteinModelPortal:Q9FJP9
SMR:Q9FJP9 STRING:Q9FJP9 PaxDb:Q9FJP9 EnsemblPlants:AT5G65165.1
GeneID:836640 KEGG:ath:AT5G65165 GeneFarm:2172 TAIR:At5g65165
InParanoid:Q9FJP9 OMA:CRTLTKD PhylomeDB:Q9FJP9
Genevestigator:Q9FJP9 Uniprot:Q9FJP9
Length = 309
Score = 501 (181.4 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 97/164 (59%), Positives = 118/164 (71%)
Query: 152 IDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDR 210
I+ N K + I PLPHMYV+KDLV D+ NFY QYKS++PWL+ K ++ QS DR
Sbjct: 144 INPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDR 203
Query: 211 KKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDP 270
KKLDGLYECILCACC+TSCPSYWWN E++ GPA L+QAYRWI DSRDE +RL + +
Sbjct: 204 KKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITES 263
Query: 271 FS-VYRCHTIMNCTRTCPKGLNPGRAIAEIKK--LLSG-LVKKD 310
+ VYRC I NCT TCPKGLNP AI ++K LLS LV+ +
Sbjct: 264 ETKVYRCRAIKNCTATCPKGLNPASAILKMKSKHLLSDPLVRTE 307
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 56/91 (61%), Positives = 68/91 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSKIYPL 59
MVLD L KIK E D +L++RRSCREGICGSC+MNI G NT+AC+ I+ N K + I PL
Sbjct: 98 MVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPL 157
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PHMYV+KDLV D+ NFY QYKS++ PW
Sbjct: 158 PHMYVIKDLVVDLTNFYQQYKSME-----PW 183
Score = 146 (56.5 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 313 GLDTAA-LHKIDAN-DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A L I+ N K + I PLPHMYV+KDLV D+ NFY QYKS++PWL
Sbjct: 134 GTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWL 184
Score = 107 (42.7 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 87 GGPWKIL-GTLTAKNIRSFQLSAAASSAVPAEKPAKYKT----FAIYRWNPDKPDEKPTM 141
GG + IL G A+++ L S + EK ++K F IYRWNPDKP+ KP +
Sbjct: 29 GGDFPILNGHKAAQDLSKDTLK---SQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFL 85
Query: 142 QEYKVDLNN 150
Q + VDL++
Sbjct: 86 QSFFVDLSS 94
>DICTYBASE|DDB_G0270120 [details] [associations]
symbol:sdhB "succinate dehydrogenase (ubiquinone)"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA;ISS] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA;ISS] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA;ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=ISS] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 dictyBase:DDB_G0270120 Prosite:PS00198
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GO:GO:0008177 eggNOG:COG0479 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP RefSeq:XP_646559.1 HSSP:Q9YHT2
ProteinModelPortal:Q55CC2 SMR:Q55CC2 STRING:Q55CC2 PRIDE:Q55CC2
EnsemblProtists:DDB0231383 GeneID:8617527 KEGG:ddi:DDB_G0270120
ProtClustDB:CLSZ2431440 Uniprot:Q55CC2
Length = 287
Score = 528 (190.9 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 99/157 (63%), Positives = 121/157 (77%)
Query: 154 ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQR--DKENIGNAQYLQSLDDRK 211
+ D V K+YPLPHM+VV+DL+PD+++FY Q+KSI+PWL+ D + LQS ++R
Sbjct: 130 SGDTV-KVYPLPHMHVVRDLIPDLSHFYTQHKSIKPWLEPAVDVPRYNGKEILQSKENRH 188
Query: 212 KLDGLYECILCACCSTSCPSYWWN--GEK-YLGPAVLMQAYRWIIDSRDEKTADRLNQL- 267
KLDGLYECILCACCSTSCPSYWW+ G+ YLGPAVL+QAYRWI DSRD DRL L
Sbjct: 189 KLDGLYECILCACCSTSCPSYWWSEGGDGGYLGPAVLLQAYRWIADSRDSIQKDRLAILS 248
Query: 268 KDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
+D VY+CHTIMNCT CPKGLNPG++IA IK LL+
Sbjct: 249 EDQMKVYKCHTIMNCTAVCPKGLNPGKSIANIKYLLA 285
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/93 (64%), Positives = 74/93 (79%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKID---ANDKVSKIY 57
MVLDAL+ IKN +DPTL+FRRSCREGICGSCAMN+ G NTLAC KI + D V K+Y
Sbjct: 79 MVLDALLLIKNNIDPTLSFRRSCREGICGSCAMNLNGSNTLACTKKITDCLSGDTV-KVY 137
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
PLPHM+VV+DL+PD+++FY Q+KSI+ PW
Sbjct: 138 PLPHMHVVRDLIPDLSHFYTQHKSIK-----PW 165
Score = 146 (56.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 24/42 (57%), Positives = 36/42 (85%)
Query: 324 ANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLPRSI 365
+ D V K+YPLPHM+VV+DL+PD+++FY Q+KSI+PWL ++
Sbjct: 130 SGDTV-KVYPLPHMHVVRDLIPDLSHFYTQHKSIKPWLEPAV 170
Score = 64 (27.6 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 95 TLTAKNIRSFQLSAAASSAVPAEKPAKYKTFAIYRWNPDKPDEKPTMQEYKVDLNN 150
T TAK S S+ AEK + F +YR+N ++ KP +Q Y ++L +
Sbjct: 24 TTTAKTEAS---SSPQMKIKTAEKKDHFVNFQVYRYN-EETTAKPYIQTYNINLKD 75
>TIGR_CMR|NSE_0534 [details] [associations]
symbol:NSE_0534 "succinate dehydrogenase and fumarate
reductase iron-sulfur protein" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_506417.1 ProteinModelPortal:Q2GDM9 SMR:Q2GDM9
STRING:Q2GDM9 GeneID:3932205 KEGG:nse:NSE_0534 PATRIC:22681115
OMA:PSHAIER BioCyc:NSEN222891:GHFU-553-MONOMER Uniprot:Q2GDM9
Length = 254
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 92/144 (63%), Positives = 117/144 (81%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
+IYPLPHM V+KDLV D+ F+ Y+SI+PWL +K N G ++LQ ++R+KL GL++C
Sbjct: 109 RIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWLHSEKSNNGK-EHLQMPEEREKLAGLHDC 167
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
ILCACCSTSCPS+WWNG+KYLGPA L+QAYRW++DSRD K +RL L D F +YRCHTI
Sbjct: 168 ILCACCSTSCPSFWWNGDKYLGPAALLQAYRWLVDSRDSKKKERLEFLADSFRLYRCHTI 227
Query: 280 MNCTRTCPKGLNPGRAIAEIKKLL 303
MNC + CPKGLNP +AIAEIKK++
Sbjct: 228 MNCAQACPKGLNPAKAIAEIKKMI 251
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 56/90 (62%), Positives = 68/90 (75%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLP 60
M+LDALIK+K E+DPTLTFRRSCREG+CGSCAMNI G NTLAC ++D +IYPLP
Sbjct: 55 MILDALIKVKGEIDPTLTFRRSCREGVCGSCAMNIDGRNTLACTKRMDEIKGEIRIYPLP 114
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGGPW 90
HM V+KDLV D+ F+ Y+SI+ PW
Sbjct: 115 HMRVLKDLVTDLTVFFQHYRSIK-----PW 139
Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 313 GLDTAALHK-IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G +T A K +D +IYPLPHM V+KDLV D+ F+ Y+SI+PWL
Sbjct: 91 GRNTLACTKRMDEIKGEIRIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWL 140
>UNIPROTKB|P07014 [details] [associations]
symbol:sdhB "succinate dehydrogenase iron-sulfur protein"
species:83333 "Escherichia coli K-12" [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA;IMP]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA;IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;IMP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0009060
"aerobic respiration" evidence=IEP] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 GO:GO:0009060
Gene3D:1.10.1060.10 GO:GO:0000104 EMBL:J01619 EMBL:X01070 PDB:1NEK
PDB:1NEN PDB:2ACZ PDB:2AD0 PDB:2WDQ PDB:2WDR PDB:2WDV PDB:2WP9
PDB:2WS3 PDB:2WU2 PDB:2WU5 PDBsum:1NEK PDBsum:1NEN PDBsum:2ACZ
PDBsum:2AD0 PDBsum:2WDQ PDBsum:2WDR PDBsum:2WDV PDBsum:2WP9
PDBsum:2WS3 PDBsum:2WU2 PDBsum:2WU5 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 EMBL:X00661 PIR:A28837
RefSeq:NP_415252.1 RefSeq:YP_489004.1 ProteinModelPortal:P07014
SMR:P07014 DIP:DIP-10836N IntAct:P07014 PRIDE:P07014
EnsemblBacteria:EBESCT00000004560 EnsemblBacteria:EBESCT00000004561
EnsemblBacteria:EBESCT00000017526 GeneID:12932956 GeneID:945300
KEGG:ecj:Y75_p0704 KEGG:eco:b0724 PATRIC:32116643 EchoBASE:EB0925
EcoGene:EG10932 BioCyc:EcoCyc:SDH-FE-S
BioCyc:ECOL316407:JW0714-MONOMER BioCyc:MetaCyc:SDH-FE-S
EvolutionaryTrace:P07014 Genevestigator:P07014 Uniprot:P07014
Length = 238
Score = 486 (176.1 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 86/143 (60%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PLP + V++DLV DM FYAQY+ I+P+L + +N ++LQ + R+KLDGLYECI
Sbjct: 91 IRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECI 150
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD +T RL+ L D FSV+RCH+IM
Sbjct: 151 LCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIM 210
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP RAI IK +L
Sbjct: 211 NCVSVCPKGLNPTRAIGHIKSML 233
Score = 237 (88.5 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 49/89 (55%), Positives = 66/89 (74%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK---IY 57
M+LDALI++K E DP+L+FRRSCREG+CGS +N+ G N LACI+ I A ++ K I
Sbjct: 34 MLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIR 92
Query: 58 PLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
PLP + V++DLV DM FYAQY+ I+ +L
Sbjct: 93 PLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 104 (41.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 305 GLVKKDKPGLDTAALHKIDANDKVSK---IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL A + I A ++ K I PLP + V++DLV DM FYAQY+ I+P+L
Sbjct: 64 GLNMNGKNGL--ACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Score = 68 (29.0 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID 153
F+IYR+NPD D+ P MQ+Y ++ + D
Sbjct: 5 FSIYRYNPDV-DDAPRMQDYTLEADEGRD 32
>UNIPROTKB|Q4KFZ0 [details] [associations]
symbol:sdhB "Succinate dehydrogenase, iron-sulfur protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005886 GO:GO:0009055 GO:GO:0006099
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:DAAPFMQ RefSeq:YP_258843.1
ProteinModelPortal:Q4KFZ0 SMR:Q4KFZ0 STRING:Q4KFZ0 GeneID:3478177
KEGG:pfl:PFL_1717 PATRIC:19872663
BioCyc:PFLU220664:GIX8-1725-MONOMER Uniprot:Q4KFZ0
Length = 234
Score = 481 (174.4 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 85/143 (59%), Positives = 110/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
+ PLP + V++DLV DM+ FY QY+ ++P+LQ D + LQS ++R+KLDGLYECI
Sbjct: 88 VRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQNDTPAPA-IERLQSPEEREKLDGLYECI 146
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K+LGPA L+QAYR++ DSRD KT++RL L DPFSV+RC IM
Sbjct: 147 LCACCSTSCPSFWWNPDKFLGPAALLQAYRFLADSRDTKTSERLASLDDPFSVFRCRGIM 206
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI I+ +L
Sbjct: 207 NCVNVCPKGLNPTKAIGHIRNML 229
Score = 209 (78.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 56/138 (40%), Positives = 75/138 (54%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY--P 58
MVLD L IK E D ++RRSCREG+CGS MNI G N LACI+ + A K +K+ P
Sbjct: 32 MVLDVLALIK-EQDEGFSYRRSCREGVCGSDGMNINGKNGLACITPLSAVVKKNKLVVRP 90
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGG--PWKILGTLTAKNIRSFQLSAAASSAVPA 116
LP + V++DLV DM+ FY QY+ ++ L P + L + R +L + A
Sbjct: 91 LPGLPVIRDLVVDMSIFYKQYEKVKPFLQNDTPAPAIERLQSPEERE-KLDGLYECILCA 149
Query: 117 EKPAKYKTFAIYRWNPDK 134
+F WNPDK
Sbjct: 150 CCSTSCPSFW---WNPDK 164
Score = 57 (25.1 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 127 IYRWNPDKPDEKPTMQEYKVDLNNK 151
+YR+NPD D P Q ++VD K
Sbjct: 6 VYRYNPDT-DSAPKTQVFQVDTGGK 29
>UNIPROTKB|Q48K72 [details] [associations]
symbol:sdhB "Succinate dehydrogenase, iron-sulfur protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 GO:GO:0051536 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000104
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_274203.1 ProteinModelPortal:Q48K72 SMR:Q48K72
STRING:Q48K72 GeneID:3555647 KEGG:psp:PSPPH_1979 PATRIC:19973160
OMA:DAAPFMQ Uniprot:Q48K72
Length = 234
Score = 471 (170.9 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 82/143 (57%), Positives = 109/143 (76%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
+ PLP + V++DLV DM+ FY QY+ ++P+LQ D + LQ+ ++R+KLDGLYECI
Sbjct: 88 VRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQNDTPAPA-IERLQTPEEREKLDGLYECI 146
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LCACCSTSCPS+WWN +K+LGPA L+QAYR++ DSRD +T +RL L DPFSV+RC IM
Sbjct: 147 LCACCSTSCPSFWWNPDKFLGPAALLQAYRFLADSRDTRTNERLASLDDPFSVFRCRGIM 206
Query: 281 NCTRTCPKGLNPGRAIAEIKKLL 303
NC CPKGLNP +AI ++ +L
Sbjct: 207 NCVNVCPKGLNPTKAIGHVRNML 229
Score = 201 (75.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY--P 58
MVLD L +K E D ++RRSCREG+CGS MNI G N LACI+ + A +K+ P
Sbjct: 32 MVLDVLALVK-EQDQGFSYRRSCREGVCGSDGMNINGKNGLACITPLSAVVAKNKLIVRP 90
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LP + V++DLV DM+ FY QY+ ++ L
Sbjct: 91 LPGLPVIRDLVVDMSIFYKQYEKVKPFL 118
Score = 90 (36.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 305 GLVKKDKPGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
G+ K GL L + A +K+ + PLP + V++DLV DM+ FY QY+ ++P+L
Sbjct: 62 GMNINGKNGLACITPLSAVVAKNKLI-VRPLPGLPVIRDLVVDMSIFYKQYEKVKPFL 118
Score = 67 (28.6 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 126 AIYRWNPDKPDEKPTMQEYKVDLNNK 151
++YR+NP++ D P MQE++VD K
Sbjct: 5 SVYRYNPEQ-DAAPFMQEFQVDTGGK 29
>TIGR_CMR|CBU_1400 [details] [associations]
symbol:CBU_1400 "succinate dehydrogenase, iron-sulfur
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 EMBL:L33409
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP EMBL:X77919 PIR:S42873
RefSeq:NP_820385.1 ProteinModelPortal:P51053 SMR:P51053
PRIDE:P51053 GeneID:1209306 KEGG:cbu:CBU_1400 PATRIC:17931557
KO:K00240 ProtClustDB:PRK05950 BioCyc:CBUR227377:GJ7S-1388-MONOMER
Uniprot:P51053
Length = 235
Score = 468 (169.8 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 82/148 (55%), Positives = 111/148 (75%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKK 212
D D+V + PLP +++DL+ DM FYAQYK ++P+L D+E + LQS ++R K
Sbjct: 79 DLPDRVV-VRPLPGFPIIRDLIVDMEQFYAQYKKVKPYLLNDQE-APQKERLQSPEERAK 136
Query: 213 LDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
LDGLYECILCACCS+SCPSYWWN +K++GPA L+ +YR+I DSRD K +RL+ +KDP+S
Sbjct: 137 LDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYRFIADSRDSKEKERLDAMKDPYS 196
Query: 273 VYRCHTIMNCTRTCPKGLNPGRAIAEIK 300
V+RC TIM+C CPK LNP +AI +I+
Sbjct: 197 VFRCRTIMDCATVCPKNLNPAKAIRKIR 224
Score = 201 (75.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 40/87 (45%), Positives = 59/87 (67%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPL 59
M+L+AL ++ E P + RRSC EG+CGS MNI G N LAC++++ D D+V + PL
Sbjct: 32 MLLNALEALR-EKHPDIGLRRSCAEGVCGSDGMNINGKNALACVTQLKDLPDRVV-VRPL 89
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
P +++DL+ DM FYAQYK ++ +L
Sbjct: 90 PGFPIIRDLIVDMEQFYAQYKKVKPYL 116
Score = 99 (39.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 323 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
D D+V + PLP +++DL+ DM FYAQYK ++P+L
Sbjct: 79 DLPDRVV-VRPLPGFPIIRDLIVDMEQFYAQYKKVKPYL 116
Score = 68 (29.0 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 12/26 (46%), Positives = 22/26 (84%)
Query: 124 TFAIYRWNPDKPDEKPTMQEYKVDLN 149
TF+I R+NP+ D+KP MQ++++D++
Sbjct: 2 TFSIMRFNPET-DKKPYMQDFELDVS 26
>TIGR_CMR|SO_1929 [details] [associations]
symbol:SO_1929 "succinate dehydrogenase, iron-sulfur
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 GO:GO:0051536 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0008177
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 HSSP:P07014 RefSeq:NP_717536.1
ProteinModelPortal:Q8EFP1 SMR:Q8EFP1 GeneID:1169691
KEGG:son:SO_1929 PATRIC:23523491 Uniprot:Q8EFP1
Length = 235
Score = 461 (167.3 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 82/147 (55%), Positives = 109/147 (74%)
Query: 157 KVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGL 216
K +I PLP M VV+DLV D+ FY QY+ I+P+L D + ++LQS + R LDGL
Sbjct: 85 KKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLINDDKQPAR-EHLQSPEQRAHLDGL 143
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
YECI+CACCST+CPS+WWN +K++GP+ L+ AYR++IDSRD T +RL++L D +SV+RC
Sbjct: 144 YECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDSRDTATEERLSELDDAYSVFRC 203
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLL 303
H IMNC CPKGLNP +AI IK +L
Sbjct: 204 HGIMNCVDVCPKGLNPTKAIGHIKSML 230
Score = 238 (88.8 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 50/87 (57%), Positives = 61/87 (70%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA-NDKVSKIYPL 59
MVLDALIK+K E DPTL FRRSCREG+CGS +N+ G N LACI+ + K +I PL
Sbjct: 34 MVLDALIKLK-EKDPTLVFRRSCREGVCGSDGLNMNGKNGLACITPVSTFKGKKLEIRPL 92
Query: 60 PHMYVVKDLVPDMNNFYAQYKSIQRHL 86
P M VV+DLV D+ FY QY+ I+ L
Sbjct: 93 PGMPVVRDLVVDLTQFYKQYEKIKPFL 119
Score = 97 (39.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 305 GLVKKDKPGLDTAALHKIDA-NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL A + + K +I PLP M VV+DLV D+ FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGL--ACITPVSTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFL 119
Score = 75 (31.5 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID 153
FA+YR+NPD D KP MQ+Y +++ + D
Sbjct: 5 FAVYRYNPDV-DTKPYMQDYSLEVADGTD 32
>TIGR_CMR|CPS_2218 [details] [associations]
symbol:CPS_2218 "succinate dehydrogenase, iron-sulfur
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 RefSeq:YP_268943.1
ProteinModelPortal:Q482S4 SMR:Q482S4 STRING:Q482S4 GeneID:3518711
KEGG:cps:CPS_2218 PATRIC:21467547
BioCyc:CPSY167879:GI48-2288-MONOMER Uniprot:Q482S4
Length = 235
Score = 470 (170.5 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 83/148 (56%), Positives = 112/148 (75%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
DK+ + PLP + VV+DL+ DM FY QY+ I+P+L D + + +Q++++R KLDG
Sbjct: 85 DKII-LRPLPGLPVVRDLIIDMTQFYQQYEKIKPYLINDAQPAAR-ENIQTIEERDKLDG 142
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECILCACCSTSCPS+WWN +K++GPA L+ AYR++IDSRD T +RL+ L+D +SV+R
Sbjct: 143 LYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFLIDSRDTATEERLDGLQDAYSVFR 202
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
CH IMNC CPKGLNP +AI IK +L
Sbjct: 203 CHGIMNCVDVCPKGLNPTKAIGHIKSML 230
Score = 216 (81.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIY--P 58
MVLDALI +K E D +L+FRRSCREG+CGS +N+ G N LACI+ + + K KI P
Sbjct: 34 MVLDALILLK-ETDSSLSFRRSCREGVCGSDGLNMNGKNGLACITPL-SELKADKIILRP 91
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
LP + VV+DL+ DM FY QY+ I+ +L
Sbjct: 92 LPGLPVVRDLIIDMTQFYQQYEKIKPYL 119
Score = 97 (39.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 305 GLVKKDKPGLDTAA-LHKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL L ++ A DK+ + PLP + VV+DL+ DM FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPLSELKA-DKII-LRPLPGLPVVRDLIIDMTQFYQQYEKIKPYL 119
Score = 63 (27.2 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDL 148
F+IYR+NPD D P M++Y++++
Sbjct: 5 FSIYRYNPDV-DNAPYMKDYELEV 27
>UNIPROTKB|Q9KQB2 [details] [associations]
symbol:VC_2088 "Succinate dehydrogenase, iron-sulfur
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0045282
"plasma membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0045282 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP KO:K00240 ProtClustDB:PRK05950
HSSP:P07014 PIR:F82118 RefSeq:NP_231720.1 ProteinModelPortal:Q9KQB2
SMR:Q9KQB2 DNASU:2613344 GeneID:2613344 KEGG:vch:VC2088
PATRIC:20083207 Uniprot:Q9KQB2
Length = 236
Score = 464 (168.4 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 83/148 (56%), Positives = 107/148 (72%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
DK+ I PLP + VV+DL+ DM FY Y ++P+L D + + LQS ++R LDG
Sbjct: 85 DKIV-IRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADDALPPSRENLQSPEERAHLDG 143
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECI+CACC+TSCPS+WWN +K++GPA L+ AYRW+IDSRD T +RL+ L D FSV+R
Sbjct: 144 LYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDSRDTATDERLSNLDDAFSVFR 203
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
CH IMNC CPKGLNP +AI IK +L
Sbjct: 204 CHGIMNCVSVCPKGLNPTKAIGHIKSML 231
Score = 220 (82.5 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 56/137 (40%), Positives = 77/137 (56%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
MVLDALI +K E DP++ FRRSCREG+CGS +N+ G N LACI+ + A DK+ I P
Sbjct: 34 MVLDALILLK-EQDPSIAFRRSCREGVCGSDGLNMNGKNGLACITPLSALKGDKIV-IRP 91
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEK 118
LP + VV+DL+ DM FY Y ++ L + + +N++S + A
Sbjct: 92 LPGLPVVRDLIVDMTQFYDNYAKVKPFLIADDAL--PPSRENLQSPEERAHLDGLYECIM 149
Query: 119 PAKYKTFA-IYRWNPDK 134
A T + WNPDK
Sbjct: 150 CACCTTSCPSFWWNPDK 166
Score = 90 (36.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 305 GLVKKDKPGLDTAALHKIDA--NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL A + + A DK+ I PLP + VV+DL+ DM FY Y ++P+L
Sbjct: 64 GLNMNGKNGL--ACITPLSALKGDKIV-IRPLPGLPVVRDLIVDMTQFYDNYAKVKPFL 119
Score = 65 (27.9 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID 153
F++YR+NPD D KP M++Y +++ D
Sbjct: 5 FSLYRYNPDV-DNKPYMKDYILEVEEGSD 32
>TIGR_CMR|VC_2088 [details] [associations]
symbol:VC_2088 "succinate dehydrogenase, iron-sulfur
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0045282 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP KO:K00240 ProtClustDB:PRK05950
HSSP:P07014 PIR:F82118 RefSeq:NP_231720.1 ProteinModelPortal:Q9KQB2
SMR:Q9KQB2 DNASU:2613344 GeneID:2613344 KEGG:vch:VC2088
PATRIC:20083207 Uniprot:Q9KQB2
Length = 236
Score = 464 (168.4 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 83/148 (56%), Positives = 107/148 (72%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
DK+ I PLP + VV+DL+ DM FY Y ++P+L D + + LQS ++R LDG
Sbjct: 85 DKIV-IRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADDALPPSRENLQSPEERAHLDG 143
Query: 216 LYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYR 275
LYECI+CACC+TSCPS+WWN +K++GPA L+ AYRW+IDSRD T +RL+ L D FSV+R
Sbjct: 144 LYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYRWLIDSRDTATDERLSNLDDAFSVFR 203
Query: 276 CHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
CH IMNC CPKGLNP +AI IK +L
Sbjct: 204 CHGIMNCVSVCPKGLNPTKAIGHIKSML 231
Score = 220 (82.5 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 56/137 (40%), Positives = 77/137 (56%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
MVLDALI +K E DP++ FRRSCREG+CGS +N+ G N LACI+ + A DK+ I P
Sbjct: 34 MVLDALILLK-EQDPSIAFRRSCREGVCGSDGLNMNGKNGLACITPLSALKGDKIV-IRP 91
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSIQRHLGGPWKILGTLTAKNIRSFQLSAAASSAVPAEK 118
LP + VV+DL+ DM FY Y ++ L + + +N++S + A
Sbjct: 92 LPGLPVVRDLIVDMTQFYDNYAKVKPFLIADDAL--PPSRENLQSPEERAHLDGLYECIM 149
Query: 119 PAKYKTFA-IYRWNPDK 134
A T + WNPDK
Sbjct: 150 CACCTTSCPSFWWNPDK 166
Score = 90 (36.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 305 GLVKKDKPGLDTAALHKIDA--NDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL 361
GL K GL A + + A DK+ I PLP + VV+DL+ DM FY Y ++P+L
Sbjct: 64 GLNMNGKNGL--ACITPLSALKGDKIV-IRPLPGLPVVRDLIVDMTQFYDNYAKVKPFL 119
Score = 65 (27.9 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 125 FAIYRWNPDKPDEKPTMQEYKVDLNNKID 153
F++YR+NPD D KP M++Y +++ D
Sbjct: 5 FSLYRYNPDV-DNKPYMKDYILEVEEGSD 32
>UNIPROTKB|O53371 [details] [associations]
symbol:sdhB "Succinate dehydrogenase and fumarate reductase
iron-sulfur protein" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005886 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0009055 GO:GO:0016491 GO:GO:0006099
GO:GO:0051536 EMBL:BX842582 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:LIVDMEP HSSP:P07014 EMBL:CP003248
PIR:F70843 RefSeq:NP_217836.1 RefSeq:NP_337948.1
RefSeq:YP_006516798.1 SMR:O53371 EnsemblBacteria:EBMYCT00000002372
EnsemblBacteria:EBMYCT00000071457 GeneID:13318144 GeneID:887562
GeneID:926326 KEGG:mtc:MT3420 KEGG:mtu:Rv3319 KEGG:mtv:RVBD_3319
PATRIC:18129270 TubercuList:Rv3319 Uniprot:O53371
Length = 263
Score = 331 (121.6 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 66/157 (42%), Positives = 94/157 (59%)
Query: 147 DLNNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQS 206
DL K + P+ + V KDLV DM F+ Y++I+P+L N + +QS
Sbjct: 105 DLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSG-NPPTRERIQS 163
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
DR + D +CILCACC+TSCP +W G Y GPA ++ A+R+I DSRDE A+RL+
Sbjct: 164 PTDRARYDDTTKCILCACCTTSCPVFWHEGS-YFGPAAIVNAHRFIFDSRDEAAAERLDI 222
Query: 267 LKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
L + V+RC T NCT +CP+G+ +AI E+K+ L
Sbjct: 223 LNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRAL 259
Score = 170 (64.9 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSK------ 55
+L+ LI IK +D TLTFRRSC G+CGS AM I GVN LAC K+ D + K
Sbjct: 58 LLNLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLAC--KVLMRDLLPKKKGKSL 115
Query: 56 ---IYPLPHMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ P+ + V KDLV DM F+ Y++I+ +L
Sbjct: 116 TVTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYL 149
Score = 44 (20.5 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 115 PAEKPAKYKTFAIYRWNPDKPD 136
P A T I R+NPD PD
Sbjct: 16 PVPDGAVMVTVKIARFNPDDPD 37
>TIGR_CMR|CHY_0064 [details] [associations]
symbol:CHY_0064 "fumarate reductase, iron-sulfur subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00245
RefSeq:YP_358936.1 ProteinModelPortal:Q3AFZ8 STRING:Q3AFZ8
GeneID:3727128 KEGG:chy:CHY_0064 PATRIC:21273325 OMA:GCCASEC
ProtClustDB:CLSK2772298 BioCyc:CHYD246194:GJCN-64-MONOMER
Uniprot:Q3AFZ8
Length = 317
Score = 198 (74.8 bits), Expect = 7.9e-25, Sum P(2) = 7.9e-25
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYECI 220
I PL + V++DLV D + ++PWL E Q+ ++ KK++ +CI
Sbjct: 90 IEPLQNFKVIRDLVVDWETKVERLARVKPWLIPRDEFSKETGCRQTPEEFKKINKNSDCI 149
Query: 221 LCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTIM 280
LC CC++ C N +L P + +A ++I DSRD+ R++ + ++C
Sbjct: 150 LCGCCASECNKLSNNDSDFLEPFIFSKAQKFIADSRDKDPLSRISTAINN-GAWKCMHCQ 208
Query: 281 NCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPG 313
C CPKGL+P I+ I++ ++ PG
Sbjct: 209 ECVTKCPKGLSPADDISFIRQFAIANGIRNNPG 241
Score = 140 (54.3 bits), Expect = 7.9e-25, Sum P(2) = 7.9e-25
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDAN-DKVSK----I 56
+L AL IK +DPTLTF SCR +CG+CA+ + G LAC + +D D+ I
Sbjct: 31 ILWALSYIKESIDPTLTFTASCRHAVCGACAVRVNGQAVLACETLLDKMLDRWETDTLLI 90
Query: 57 YPLPHMYVVKDLVPD 71
PL + V++DLV D
Sbjct: 91 EPLQNFKVIRDLVVD 105
>TIGR_CMR|CHY_1370 [details] [associations]
symbol:CHY_1370 "fumarate reductase, iron-sulfur subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 ProtClustDB:PRK05950 KO:K00245
RefSeq:YP_360202.1 ProteinModelPortal:Q3ACD2 STRING:Q3ACD2
GeneID:3727625 KEGG:chy:CHY_1370 PATRIC:21275873 OMA:NLNPARA
BioCyc:CHYD246194:GJCN-1369-MONOMER Uniprot:Q3ACD2
Length = 263
Score = 229 (85.7 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 51/160 (31%), Positives = 86/160 (53%)
Query: 158 VSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL--QRDKENIG-NAQYLQSLDDRKKLD 214
V +I PLP+ +KDLVPD+ + ++K+++P++ + ++E I +Y Q+ + ++
Sbjct: 85 VIEIAPLPNYKNIKDLVPDLTPLFEKHKNVKPYVIPENEQEFINPTGEYSQTPAELEEYL 144
Query: 215 GLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVY 274
CI C C +CP+ + + GP L QAYR+ D+RD +R Q+ +P ++
Sbjct: 145 QFAYCIKCGACLAACPTVGTTPD-FPGPQALAQAYRYNADNRDFGEKERKVQVDNPKGLW 203
Query: 275 RCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKDKPGL 314
RCH C CPKG++P AI K+ +K K L
Sbjct: 204 RCHMAGACAEACPKGVDPALAIQLFKRSFFFTGRKPKARL 243
Score = 182 (69.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 38/86 (44%), Positives = 54/86 (62%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISK-IDANDKVSKIYPLP 60
VLD L IK +D TL FR SCR GICGSCAM I LAC ++ + V +I PLP
Sbjct: 33 VLDCLYYIKENIDATLAFRASCRMGICGSCAMYINKKPRLACETQALSLGTDVIEIAPLP 92
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHL 86
+ +KDLVPD+ + ++K+++ ++
Sbjct: 93 NYKNIKDLVPDLTPLFEKHKNVKPYV 118
>TIGR_CMR|SO_0399 [details] [associations]
symbol:SO_0399 "fumarate reductase iron-sulfur protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=ISS] [GO:0009061 "anaerobic respiration"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51379 GO:GO:0009055 GO:GO:0006099
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00245 HSSP:P17596
ProtClustDB:PRK13552 RefSeq:NP_716037.1 ProteinModelPortal:Q8EJR3
SMR:Q8EJR3 GeneID:1168276 KEGG:son:SO_0399 PATRIC:23520501
OMA:CRTLTSK Uniprot:Q8EJR3
Length = 243
Score = 142 (55.0 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 36/148 (24%), Positives = 74/148 (50%)
Query: 161 IYPLPHMYVVKDLVPDMNNFYAQY-KSIQPWLQRDKENIGNAQYLQSL--DDRKKLDGLY 217
+ PLP ++ DL + F + + ++ WL +I + + + ++ +L L
Sbjct: 93 LMPLPGFELIGDLSVNTGKFMRELAERLKLWLHPKANDISIHRLEEPMAPEEAARLYELE 152
Query: 218 ECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTA-DRLNQLKDPFSVYRC 276
C+ C C ++C + E ++G +M+ R+ +DSRD +TA D + + + V+ C
Sbjct: 153 RCVECGVCVSACATKQMR-ETFVGAVGMMKIARFELDSRDARTAEDFYHVIGNQDGVFGC 211
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIKKLLS 304
T++ C CPK L + IA +++ ++
Sbjct: 212 MTLLGCQDNCPKDLPHMQQIAYLRRKMA 239
Score = 124 (48.7 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 31/75 (41%), Positives = 39/75 (52%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVS-KIYPLP 60
V AL K++ E D +L F CR GICGSCAM I G TLAC + K + PLP
Sbjct: 38 VFIALNKLREEQDTSLQFDFVCRAGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLP 97
Query: 61 HMYVVKDLVPDMNNF 75
++ DL + F
Sbjct: 98 GFELIGDLSVNTGKF 112
Score = 65 (27.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 124 TFAIYRWNPDKPDEKPTMQEYKV 146
TF I+R++P +P++KP M Y++
Sbjct: 8 TFNIFRYDPQEPNDKPKMVRYQL 30
>UNIPROTKB|Q9KNS4 [details] [associations]
symbol:VC_2657 "Fumarate reductase, iron-sulfur protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099
GO:GO:0009061 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00245 ProtClustDB:PRK12385 PIR:G82050
RefSeq:NP_232285.1 HSSP:P00364 ProteinModelPortal:Q9KNS4
DNASU:2615674 GeneID:2615674 KEGG:vch:VC2657 PATRIC:20084334
OMA:EKDAEPY Uniprot:Q9KNS4
Length = 252
Score = 205 (77.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 47/144 (32%), Positives = 76/144 (52%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL---QRDKENIGNAQYLQSLDDRKKLDGL 216
KI PL + + KDL+ DM F + ++I+P++ R E+ N Q + + K+ G
Sbjct: 90 KIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRKPEDGTNLQTPEQMARYKQFAG- 148
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
CI C C +CP + N E +LGPA L A+R+ +DSRD A+R+ + + C
Sbjct: 149 --CINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLDSRDNGKAERMKLINGDNGAWGC 205
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIK 300
+ C+ CPK ++P A+ + K
Sbjct: 206 TFVGYCSEVCPKHVDPAAAVNQGK 229
Score = 158 (60.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLDA+ +K+ +D L++R SCR ICGSC + + GV LAC S + + KI PL +
Sbjct: 37 VLDAIGYVKDHLDKDLSYRWSCRMAICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLAN 96
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGG 88
+ KDL+ DM F + ++I+ ++ G
Sbjct: 97 FPIEKDLIVDMTPFIERLEAIKPYIIG 123
>TIGR_CMR|VC_2657 [details] [associations]
symbol:VC_2657 "fumarate reductase, iron-sulfur protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0009061
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00245 ProtClustDB:PRK12385 PIR:G82050
RefSeq:NP_232285.1 HSSP:P00364 ProteinModelPortal:Q9KNS4
DNASU:2615674 GeneID:2615674 KEGG:vch:VC2657 PATRIC:20084334
OMA:EKDAEPY Uniprot:Q9KNS4
Length = 252
Score = 205 (77.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 47/144 (32%), Positives = 76/144 (52%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWL---QRDKENIGNAQYLQSLDDRKKLDGL 216
KI PL + + KDL+ DM F + ++I+P++ R E+ N Q + + K+ G
Sbjct: 90 KIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRKPEDGTNLQTPEQMARYKQFAG- 148
Query: 217 YECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRC 276
CI C C +CP + N E +LGPA L A+R+ +DSRD A+R+ + + C
Sbjct: 149 --CINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLDSRDNGKAERMKLINGDNGAWGC 205
Query: 277 HTIMNCTRTCPKGLNPGRAIAEIK 300
+ C+ CPK ++P A+ + K
Sbjct: 206 TFVGYCSEVCPKHVDPAAAVNQGK 229
Score = 158 (60.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDANDKVSKIYPLPH 61
VLDA+ +K+ +D L++R SCR ICGSC + + GV LAC S + + KI PL +
Sbjct: 37 VLDAIGYVKDHLDKDLSYRWSCRMAICGSCGIMVNGVPKLACKSFLRDYPEGVKIEPLAN 96
Query: 62 MYVVKDLVPDMNNFYAQYKSIQRHLGG 88
+ KDL+ DM F + ++I+ ++ G
Sbjct: 97 FPIEKDLIVDMTPFIERLEAIKPYIIG 123
>UNIPROTKB|P0AC47 [details] [associations]
symbol:frdB "fumarate reductase iron-sulfur protein"
species:83333 "Escherichia coli K-12" [GO:0016020 "membrane"
evidence=IDA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009296
"flagellum assembly" evidence=IMP] [GO:0001539 "ciliary or
flagellar motility" evidence=IMP] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA;IDA] [GO:0051538 "3 iron, 4 sulfur
cluster binding" evidence=IEA;IDA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0009061 "anaerobic respiration" evidence=IMP] [GO:0006113
"fermentation" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0016020 GO:GO:0009055 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0006113
GO:GO:0009061 GO:GO:0051538 EMBL:U14003 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:J01611 EMBL:V00277 GO:GO:0009296
GO:GO:0000104 GO:GO:0001539 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 PDB:1KF6 PDB:1KFY PDB:1L0V
PDB:2B76 PDB:3CIR PDB:3P4P PDB:3P4Q PDB:3P4R PDB:3P4S PDBsum:1KF6
PDBsum:1KFY PDBsum:1L0V PDBsum:2B76 PDBsum:3CIR PDBsum:3P4P
PDBsum:3P4Q PDBsum:3P4R PDBsum:3P4S PIR:A00377 RefSeq:NP_418577.1
RefSeq:YP_492298.1 ProteinModelPortal:P0AC47 SMR:P0AC47
IntAct:P0AC47 PRIDE:P0AC47 EnsemblBacteria:EBESCT00000004418
EnsemblBacteria:EBESCT00000017881 GeneID:12933707 GeneID:948666
KEGG:ecj:Y75_p4042 KEGG:eco:b4153 PATRIC:32123879 EchoBASE:EB0327
EcoGene:EG10331 KO:K00245 OMA:NPRTPDQ ProtClustDB:PRK12385
BioCyc:EcoCyc:FUM-FE-S BioCyc:ECOL316407:JW4114-MONOMER
BioCyc:MetaCyc:FUM-FE-S EvolutionaryTrace:P0AC47
Genevestigator:P0AC47 Uniprot:P0AC47
Length = 244
Score = 196 (74.1 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 160 KIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDGLYEC 219
K+ L + + +DLV DM +F ++I+P++ + +Q+ K C
Sbjct: 90 KVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGC 149
Query: 220 ILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFSVYRCHTI 279
I C C +CP + N E ++GPA + A+R+ DSRD +R+ QL V+ C +
Sbjct: 150 INCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFV 208
Query: 280 MNCTRTCPKGLNPGRAIAEIK 300
C+ CPK ++P AI + K
Sbjct: 209 GYCSEVCPKHVDPAAAIQQGK 229
Score = 146 (56.5 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKI-DANDKVSKIYPLP 60
+LDAL IK+ + P L++R SCR ICGSC M + V LAC + + D D + K+ L
Sbjct: 37 LLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGM-KVEALA 95
Query: 61 HMYVVKDLVPDMNNFYAQYKSIQRHLGG 88
+ + +DLV DM +F ++I+ ++ G
Sbjct: 96 NFPIERDLVVDMTHFIESLEAIKPYIIG 123
>TIGR_CMR|CJE_0489 [details] [associations]
symbol:CJE_0489 "succinate dehydrogenase, iron-sulfur
protein subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 OMA:WSADSRD SUPFAM:SSF46548 TIGRFAMs:TIGR00384
KO:K00240 RefSeq:YP_178508.1 ProteinModelPortal:Q5HW27
STRING:Q5HW27 GeneID:3231250 KEGG:cjr:CJE0489 PATRIC:20042682
ProtClustDB:CLSK878790 BioCyc:CJEJ195099:GJC0-499-MONOMER
Uniprot:Q5HW27
Length = 321
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 147 DLNNKIDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQS 206
DL + D N +I PL + V+ DL+ D + I+P + E QS
Sbjct: 77 DLLKEYD-NPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQS 135
Query: 207 LDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQ 266
++ ++ ++CILC C++ C + Y+ P V A+R DSR + D +
Sbjct: 136 QEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAWRAAADSRGK---DPMLH 192
Query: 267 LKDPF--SVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLSGLVKKD-KPGL--DTA-ALH 320
+K ++ C C CPKG++ ++++I L +KK GL D A A +
Sbjct: 193 VKPSVMNGLWLCVHCQECADRCPKGIS---SVSDIANLRVMAIKKGLNEGLGPDHAEAFY 249
Query: 321 K--IDANDKVSKIY 332
K ++ + ++++IY
Sbjct: 250 KDLVEGSGRLNEIY 263
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA------NDKVSK 55
+L L+ IK D TL F SC+ ICG+CA+ + G + LAC +K+ N +
Sbjct: 30 LLSLLLFIKKTKDITLNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIR 89
Query: 56 IYPLPHMYVVKDLVPD 71
I PL + V+ DL+ D
Sbjct: 90 ISPLGNFRVISDLIVD 105
>TIGR_CMR|BA_4753 [details] [associations]
symbol:BA_4753 "succinate dehydrogenase, iron-sulfur
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006099
GO:GO:0051536 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 HSSP:P17596 RefSeq:NP_846959.1
RefSeq:YP_021401.1 RefSeq:YP_030659.1 ProteinModelPortal:Q81L78
DNASU:1083838 EnsemblBacteria:EBBACT00000012333
EnsemblBacteria:EBBACT00000014912 EnsemblBacteria:EBBACT00000024327
GeneID:1083838 GeneID:2815738 GeneID:2851658 KEGG:ban:BA_4753
KEGG:bar:GBAA_4753 KEGG:bat:BAS4412 HOGENOM:HOG000160588
OMA:EPMSTFP ProtClustDB:PRK08640
BioCyc:BANT260799:GJAJ-4469-MONOMER
BioCyc:BANT261594:GJ7F-4617-MONOMER Uniprot:Q81L78
Length = 253
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 152 IDANDKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKE-NIGNAQYLQSLDDR 210
ID ++ ++ P+ VV+DL D + + K ++ W+ D ++G +
Sbjct: 87 IDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNALKRVKAWIPIDGTYDLGPGPRMPE---- 142
Query: 211 KKLDGLYE---CILCACCSTSCPSYWWNGEK-YLGPAVLMQAYRWIIDSRDEK-TADRLN 265
KK YE C+ C C SCP+ N + ++GPA L QA + E ADRL
Sbjct: 143 KKRQWAYELSKCMTCGVCLESCPNV--NSKSDFIGPAPLSQARLFNSHPTGEMHKADRLR 200
Query: 266 QLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKK 301
+ + C NC ++CPKG+ +IA + +
Sbjct: 201 AIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNR 236
>TIGR_CMR|CJE_0459 [details] [associations]
symbol:CJE_0459 "fumarate reductase, iron-sulfur protein
subunit" species:195099 "Campylobacter jejuni RM1221" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] [GO:0045284 "plasma membrane fumarate
reductase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 GO:GO:0009055 GO:GO:0006099 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:CRTLTKD KO:K00245 PIR:H81384
RefSeq:YP_178478.1 ProteinModelPortal:Q5HW57 SMR:Q5HW57
STRING:Q5HW57 GeneID:3231221 KEGG:cjr:CJE0459 PATRIC:20042618
ProtClustDB:PRK13552 BioCyc:CJEJ195099:GJC0-464-MONOMER
Uniprot:Q5HW57
Length = 241
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/156 (23%), Positives = 71/156 (45%)
Query: 153 DANDKVSKIYPLPHMYVVKDLVPDMNNFYAQY-KSIQPWLQRDKENIGNAQYLQSLDDRK 211
D D V ++ P+P +KDL + ++ K ++ W+ +KE + L+ + +
Sbjct: 83 DYPDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVESWVHNEKET--DISKLEERIEPE 140
Query: 212 KLDGLYE---CILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLK 268
D +E CI C C SC + ++ L++ R++ D D ++ + +L
Sbjct: 141 VADETFELDRCIECGICVASCATKLMR-PNFIAATGLLRTARYLQDPHDHRSVEDFYELV 199
Query: 269 -DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 303
D V+ C +++ C CPK L IA +++ L
Sbjct: 200 GDDDGVFGCMSLLACEDNCPKELPLQSKIAYMRRQL 235
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 2 VLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLAC--ISKIDANDKVSKIYPL 59
V L I+ +MD L+F CR GICGSCAM I GV LAC ++K D D V ++ P+
Sbjct: 36 VFVCLTLIREKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTK-DYPDGVIELMPM 94
Query: 60 PHMYVVKDL 68
P +KDL
Sbjct: 95 PAFRHIKDL 103
>UNIPROTKB|O53669 [details] [associations]
symbol:Rv0247c "PROBABLE SUCCINATE DEHYDROGENASE
[IRON-SULFUR SUBUNIT] (SUCCINIC DEHYDROGENASE)" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
Pfam:PF00111 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0005886 GO:GO:0005618 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0016491
EMBL:BX842572 GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
EMBL:CP003248 PIR:C70939 RefSeq:NP_214761.1 RefSeq:NP_334665.1
RefSeq:YP_006513571.1 HSSP:P17596 SMR:O53669
EnsemblBacteria:EBMYCT00000001424 EnsemblBacteria:EBMYCT00000069127
GeneID:13316234 GeneID:886677 GeneID:923168 KEGG:mtc:MT0261
KEGG:mtu:Rv0247c KEGG:mtv:RVBD_0247c PATRIC:18122287
TubercuList:Rv0247c HOGENOM:HOG000022233 OMA:YDPLVWL
ProtClustDB:PRK12386 Uniprot:O53669
Length = 248
Score = 131 (51.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 1 MVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGVNTLACISKIDA--NDKVSKIYP 58
+VLD +++++ P L R +C+ G CGSC+ I G L C++++ D++ + P
Sbjct: 31 VVLDVILRLQQTQTPDLAVRWNCKAGKCGSCSAEINGKPRLMCMTRMSTFDEDEIVTVTP 90
Query: 59 LPHMYVVKDLVPDMNNFYAQYKSI 82
+ V++DLV D++ Y + + I
Sbjct: 91 MRTFPVIRDLVTDVSFNYQKAREI 114
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 156 DKVSKIYPLPHMYVVKDLVPDMNNFYAQYKSIQPWLQRDKENIGNAQYLQSLDDRKKLDG 215
D++ + P+ V++DLV D++ Y + + I P KE + ++Y + D +
Sbjct: 83 DEIVTVTPMRTFPVIRDLVTDVSFNYQKAREI-PSFAPPKE-LQPSEYRMAQVDVARSQE 140
Query: 216 LYECILCACCSTSCP---SYWWNGEKYLGPAVLMQAYRWIIDSRDEKTADRLNQLKDPFS 272
+CI C C C + N + + GP LM+ + D T DR +Q ++
Sbjct: 141 FRKCIECFLCQNVCHVVRDHEENKDAFAGPRFLMRIAELEMHPLD--TRDRRSQAQEEHG 198
Query: 273 VYRCHTIMNCTRTCPKGL 290
+ C+ CT CP+ +
Sbjct: 199 LGYCNITKCCTEVCPENI 216
>UNIPROTKB|Q74DY7 [details] [associations]
symbol:frdB "Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0009061 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
KO:K00240 RefSeq:NP_952231.1 ProteinModelPortal:Q74DY7
GeneID:2686801 KEGG:gsu:GSU1178 PATRIC:22025128
HOGENOM:HOG000160589 OMA:INVKFIA ProtClustDB:PRK07570
BioCyc:GSUL243231:GH27-1164-MONOMER Uniprot:Q74DY7
Length = 253
Score = 79 (32.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 9 IKNEMDPTLTFRRSCREGICGSCAMNIGGV 38
IK DP + F CREGICG C+ I G+
Sbjct: 52 IKQGKDP-IAFDHDCREGICGMCSQVINGI 80
Score = 79 (32.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/113 (25%), Positives = 42/113 (37%)
Query: 199 GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDE 258
GNA + D +D ECI C C CP NG L + + + + E
Sbjct: 147 GNALLIPKDDADYAMDAA-ECIGCGACVAGCP----NGSAMLFTSAKVSQLAVLPQGKAE 201
Query: 259 KT--ADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI-KKLLSGLVK 308
T + + C C CPKG+N + IA + ++ L L K
Sbjct: 202 ATRRVKAMTETLQECGFGNCTNHYECQAACPKGINV-KFIATLNREYLKSLCK 253
>TIGR_CMR|GSU_1178 [details] [associations]
symbol:GSU_1178 "fumarate reductase, iron-sulfur protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548 KO:K00240
RefSeq:NP_952231.1 ProteinModelPortal:Q74DY7 GeneID:2686801
KEGG:gsu:GSU1178 PATRIC:22025128 HOGENOM:HOG000160589 OMA:INVKFIA
ProtClustDB:PRK07570 BioCyc:GSUL243231:GH27-1164-MONOMER
Uniprot:Q74DY7
Length = 253
Score = 79 (32.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 9 IKNEMDPTLTFRRSCREGICGSCAMNIGGV 38
IK DP + F CREGICG C+ I G+
Sbjct: 52 IKQGKDP-IAFDHDCREGICGMCSQVINGI 80
Score = 79 (32.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/113 (25%), Positives = 42/113 (37%)
Query: 199 GNAQYLQSLDDRKKLDGLYECILCACCSTSCPSYWWNGEKYLGPAVLMQAYRWIIDSRDE 258
GNA + D +D ECI C C CP NG L + + + + E
Sbjct: 147 GNALLIPKDDADYAMDAA-ECIGCGACVAGCP----NGSAMLFTSAKVSQLAVLPQGKAE 201
Query: 259 KT--ADRLNQLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEI-KKLLSGLVK 308
T + + C C CPKG+N + IA + ++ L L K
Sbjct: 202 ATRRVKAMTETLQECGFGNCTNHYECQAACPKGINV-KFIATLNREYLKSLCK 253
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 365 365 0.00084 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 609 (65 KB)
Total size of DFA: 253 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 30.17u 0.07s 30.24t Elapsed: 00:00:27
Total cpu time: 30.19u 0.07s 30.26t Elapsed: 00:00:29
Start: Thu Aug 15 11:58:08 2013 End: Thu Aug 15 11:58:37 2013