BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5771
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 82/89 (92%)
Query: 11 NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKV 70
NT D+S+D+LFK+VLIGDCG GKTCVV RFRSG FVE+ GNTIGVDF+MKTV IDGK+V
Sbjct: 3 NTSDDESFDYLFKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLIDGKRV 62
Query: 71 KLQIWDTAGQERFRTITQSYYRSANGVII 99
KLQIWDTAGQERFRTITQSYYRSANGVI+
Sbjct: 63 KLQIWDTAGQERFRTITQSYYRSANGVIV 91
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 81/85 (95%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD +DFLFK+VLIGDCGVGKTCVVHRF+SG +VE+ GNTIGVDF+MKT+ ++GKKVKLQI
Sbjct: 4 DDHFDFLFKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 64 WDTAGQERFRTITQSYYRSANGVII 88
>gi|31199429|ref|XP_308662.1| AGAP007096-PA [Anopheles gambiae str. PEST]
gi|21291806|gb|EAA03951.1| AGAP007096-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/99 (74%), Positives = 86/99 (86%)
Query: 1 MSSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
MS+S +T D+S+DFLFK+VLIGDCG GKTC+V RF+SG+F+E GNTIGVDFSM
Sbjct: 1 MSASGPTSLISTGGDESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
K V++DGKKVKLQIWDTAGQERFRTITQSYYRSANGV+I
Sbjct: 61 KAVSVDGKKVKLQIWDTAGQERFRTITQSYYRSANGVLI 99
>gi|91086487|ref|XP_970606.1| PREDICTED: similar to rab 19, 41 and [Tribolium castaneum]
gi|270009806|gb|EFA06254.1| hypothetical protein TcasGA2_TC009113 [Tribolium castaneum]
Length = 221
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 85/99 (85%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTFQ----DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T +D++DFLFK+VLIGDCG GKTC+V RF++G F+E+ GNTIGVDFSM
Sbjct: 1 MTARNPTTLMAIPAEDTFDFLFKIVLIGDCGTGKTCIVQRFKNGTFIERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KTV +DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII
Sbjct: 61 KTVMVDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 81/85 (95%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ +DFLFK+VLIGDCGVGKTCVVHRF+SG +VE+ GNTIGVDF+MKT+ ++GKKVKLQI
Sbjct: 4 DEHFDFLFKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 64 WDTAGQERFRTITQSYYRSANGVII 88
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/84 (82%), Positives = 78/84 (92%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+++D+LFK+VLIGDCG GKTCVV RFRSG F+E+ GNTIGVDFSMKTV ID KK+KLQIW
Sbjct: 426 ENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMKTVLIDDKKIKLQIW 485
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTITQSYYRSANGVI+
Sbjct: 486 DTAGQERFRTITQSYYRSANGVIV 509
>gi|170027760|ref|XP_001841765.1| rab 19 [Culex quinquefasciatus]
gi|167862335|gb|EDS25718.1| rab 19 [Culex quinquefasciatus]
Length = 219
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 82/94 (87%), Gaps = 3/94 (3%)
Query: 9 HPNTF---QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNI 65
+P T ++S+DFLFK+VLIGDCG GKTC+V RF+SG+F+E GNTIGVDFSMK V +
Sbjct: 6 NPTTLMISNEESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTV 65
Query: 66 DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII
Sbjct: 66 DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
>gi|380025950|ref|XP_003696725.1| PREDICTED: ras-related protein Rab-43-like [Apis florea]
Length = 219
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
Query: 5 LTNDHPN---TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
++N P+ T D+++D+LFK+VLIGDCG GKTCVV RFRSG F+E+ GNTIGVDFSMK
Sbjct: 1 MSNRDPDNLITTNDENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMK 60
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
TV ID KKVKLQIWDTAGQERFRTITQSYYRSANGVI+
Sbjct: 61 TVLIDDKKVKLQIWDTAGQERFRTITQSYYRSANGVIV 98
>gi|157116294|ref|XP_001652810.1| rab 19, 41 and [Aedes aegypti]
gi|108876535|gb|EAT40760.1| AAEL007525-PA [Aedes aegypti]
Length = 219
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 82/95 (86%), Gaps = 4/95 (4%)
Query: 9 HPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVN 64
+P T ++S+DFLFK+VLIGDCG GKTC+V RF+SG+F+E GNTIGVDFSMK V
Sbjct: 5 NPTTLMSITNEESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVT 64
Query: 65 IDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
+DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII
Sbjct: 65 VDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
>gi|66508944|ref|XP_624576.1| PREDICTED: ras-related protein Rab-43 [Apis mellifera]
Length = 219
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
Query: 5 LTNDHPN---TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
++N P+ T D+++D+LFK+VLIGDCG GKTCVV RFRSG F+E+ GNTIGVDFSMK
Sbjct: 1 MSNRDPDNLITTNDENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMK 60
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
T+ ID KKVKLQIWDTAGQERFRTITQSYYRSANGVI+
Sbjct: 61 TILIDDKKVKLQIWDTAGQERFRTITQSYYRSANGVIV 98
>gi|340714578|ref|XP_003395804.1| PREDICTED: ras-related protein Rab-43-like [Bombus terrestris]
gi|350411163|ref|XP_003489259.1| PREDICTED: ras-related protein Rab-43-like [Bombus impatiens]
Length = 219
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 5 LTNDHPNTF---QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
++N P+ D+++D+LFK+VLIGDCG GKTCVV RFRSG F+E+ GNTIGVDFSMK
Sbjct: 1 MSNRDPDNLMATNDENFDYLFKIVLIGDCGTGKTCVVQRFRSGTFIERHGNTIGVDFSMK 60
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
TV ID KKVKLQIWDTAGQERFRTITQSYYRSANGVI+
Sbjct: 61 TVLIDDKKVKLQIWDTAGQERFRTITQSYYRSANGVIV 98
>gi|312380644|gb|EFR26581.1| hypothetical protein AND_07236 [Anopheles darlingi]
Length = 199
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 78/85 (91%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+S+DFLFK+VLIGDCG GKTC+V RF+SG+F+E GNTIGVDFSMK V +D KKVKLQI
Sbjct: 17 DESFDFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVTVDDKKVKLQI 76
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 77 WDTAGQERFRTITQSYYRSANGVII 101
>gi|307192561|gb|EFN75749.1| Ras-related protein Rab-43 [Harpegnathos saltator]
Length = 215
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 80/85 (94%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK+VLIGDCG GKTCVV RF+SG +VE+ GNTIGVDFSMKTV IDGK+VKLQI
Sbjct: 15 DENFDYLFKIVLIGDCGTGKTCVVQRFKSGTYVERQGNTIGVDFSMKTVLIDGKRVKLQI 74
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 75 WDTAGQERFRTITQSYYRSANGVII 99
>gi|405966153|gb|EKC31469.1| Ras-related protein Rab-43 [Crassostrea gigas]
Length = 192
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 82/92 (89%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
+P T DD++D+LFK+VLIGD GVGKTCVV RF+SG +VEK G+TIGVDF+MKT+ IDGK
Sbjct: 4 YPGTDSDDTFDYLFKIVLIGDAGVGKTCVVQRFKSGTYVEKHGSTIGVDFTMKTLQIDGK 63
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
+KLQIWDTAGQERFRTITQSYYRSANGVII
Sbjct: 64 LIKLQIWDTAGQERFRTITQSYYRSANGVIIA 95
>gi|443723889|gb|ELU12108.1| hypothetical protein CAPTEDRAFT_157234 [Capitella teleta]
Length = 212
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Query: 9 HPNTF-QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDG 67
HP QDD +D+LFK+VLIGD GVGKTCVV RF++G F+E+ GNTIGVDF+MKT+N+DG
Sbjct: 3 HPGPLDQDDQFDYLFKIVLIGDAGVGKTCVVQRFKTGTFLERQGNTIGVDFTMKTINLDG 62
Query: 68 KKVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
KVKLQ+WDTAGQERFRTITQSYYRSAN VI+
Sbjct: 63 NKVKLQVWDTAGQERFRTITQSYYRSANAVIMA 95
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++++DFLFK+VLIGDCG GKTC+V RF++G+FVE+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPNEENFDFLFKIVLIGDCGTGKTCIVERFKTGNFVERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK+VKLQIWDTAGQERFRTITQSYYRSANGV+I
Sbjct: 61 KTIAVEGKQVKLQIWDTAGQERFRTITQSYYRSANGVLI 99
>gi|291220854|ref|XP_002730440.1| PREDICTED: RAB family member (rab-19)-like [Saccoglossus
kowalevskii]
Length = 212
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DDS+DFLFK+VLIGD GVGKTCVV RF+SG F+EK +TIGVDF+MKT++IDGKKVKLQ+
Sbjct: 10 DDSFDFLFKIVLIGDAGVGKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLHIDGKKVKLQV 69
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 70 WDTAGQERFRTITQSYYRSANGVIIA 95
>gi|345492946|ref|XP_003426961.1| PREDICTED: ras-related protein Rab-43-like [Nasonia vitripennis]
Length = 221
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
Query: 1 MSSSLTND-HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFS 59
MSS N+ T D+ +D+LFK+VLIGDCG GKTC+V +FRSG+F+++ GNTIGVDFS
Sbjct: 1 MSSRDPNNLMTTTSNDEGFDYLFKIVLIGDCGTGKTCIVQKFRSGNFIQRHGNTIGVDFS 60
Query: 60 MKTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
MKTV +DGK+VKLQIWDTAGQERFRTITQSYYRSANGVI+
Sbjct: 61 MKTVLVDGKRVKLQIWDTAGQERFRTITQSYYRSANGVIL 100
>gi|242004508|ref|XP_002423125.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212506071|gb|EEB10387.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 210
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 77/85 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD DFLFK+VLIGDCG GKTCVV RF++G FVE+ GNTIGVDFSMK V +DGKKVKLQI
Sbjct: 4 DDYCDFLFKIVLIGDCGAGKTCVVQRFKTGAFVERHGNTIGVDFSMKNVVVDGKKVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 64 WDTAGQERFRTITQSYYRSANGVII 88
>gi|289741111|gb|ADD19303.1| Rab-related protein 3 [Glossina morsitans morsitans]
Length = 219
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 85/99 (85%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTFQ----DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++++DFLFK+VLIGD G GKTC+V RF++G+F+E+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPAEENFDFLFKIVLIGDAGTGKTCIVERFKTGNFIERQGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+N++GK VKLQIWDTAGQERFRTITQSYYRSANGVII
Sbjct: 61 KTINVEGKLVKLQIWDTAGQERFRTITQSYYRSANGVII 99
>gi|193713749|ref|XP_001945092.1| PREDICTED: ras-related protein Rab-43-like isoform 1 [Acyrthosiphon
pisum]
gi|328718639|ref|XP_003246535.1| PREDICTED: ras-related protein Rab-43-like isoform 2 [Acyrthosiphon
pisum]
Length = 235
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+D++DFLFK+VLIGDCG GKTCVV RF+SG + E GNTIGVDFSMKT+ IDGKKVKLQI
Sbjct: 31 EDNFDFLFKIVLIGDCGTGKTCVVQRFKSGTYAENQGNTIGVDFSMKTIKIDGKKVKLQI 90
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAG ERFRTITQSYYRSANGV++
Sbjct: 91 WDTAGHERFRTITQSYYRSANGVLL 115
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
Query: 5 LTNDHPNTF---QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
+++ +P T D+ +D+LFK+VLIGDCG GKTC+V R +SG+F+E+ GNTIGVDFSMK
Sbjct: 1 MSSRNPYTLMSVPDEQFDYLFKIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMK 60
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
T+ +DGK+VKLQIWDTAGQERFRTITQSYYRSANGVII
Sbjct: 61 TLIVDGKRVKLQIWDTAGQERFRTITQSYYRSANGVII 98
>gi|194752067|ref|XP_001958344.1| GF10872 [Drosophila ananassae]
gi|190625626|gb|EDV41150.1| GF10872 [Drosophila ananassae]
Length = 219
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTFQ----DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++++DFLFK+VLIGDCG GKTC+V RF++G+++E+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPSEENFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK++KLQIWDTAGQERFRTITQSYYRSANGV+I
Sbjct: 61 KTIAVEGKQIKLQIWDTAGQERFRTITQSYYRSANGVLI 99
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 78/85 (91%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ +D+LFK+VLIGDCG GKTCVV RFRSG FVE+ GNTIGVDF+MKTV IDGK++KLQI
Sbjct: 17 DERFDYLFKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTIGVDFTMKTVLIDGKRIKLQI 76
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYR ANGVI+
Sbjct: 77 WDTAGQERFRTITQSYYRCANGVIV 101
>gi|62858653|ref|NP_001016330.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266921|emb|CAJ82248.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 209
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 77/91 (84%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P D+ YDFLFK++LIGD GVGKTCVV RFRSG F E+ G+TIGVDF+MKT+ I GK+
Sbjct: 4 PPGPPDEQYDFLFKLILIGDAGVGKTCVVQRFRSGVFAERQGSTIGVDFTMKTLEIQGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
VKLQIWDTAGQERFRTITQSYYRSANG II
Sbjct: 64 VKLQIWDTAGQERFRTITQSYYRSANGAIIA 94
>gi|17737545|ref|NP_523970.1| Rab19, isoform A [Drosophila melanogaster]
gi|442630989|ref|NP_001261575.1| Rab19, isoform B [Drosophila melanogaster]
gi|194865952|ref|XP_001971685.1| GG14295 [Drosophila erecta]
gi|195491260|ref|XP_002093486.1| GE20724 [Drosophila yakuba]
gi|195588689|ref|XP_002084090.1| GD14074 [Drosophila simulans]
gi|2313047|dbj|BAA21712.1| rab-related protein 3 [Drosophila melanogaster]
gi|7295127|gb|AAF50452.1| Rab19, isoform A [Drosophila melanogaster]
gi|17945955|gb|AAL49022.1| RE48347p [Drosophila melanogaster]
gi|190653468|gb|EDV50711.1| GG14295 [Drosophila erecta]
gi|194179587|gb|EDW93198.1| GE20724 [Drosophila yakuba]
gi|194196099|gb|EDX09675.1| GD14074 [Drosophila simulans]
gi|220948860|gb|ACL86973.1| Rab-RP3-PA [synthetic construct]
gi|440215482|gb|AGB94270.1| Rab19, isoform B [Drosophila melanogaster]
Length = 219
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 85/99 (85%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++ +DFLFK+VLIGDCG GKTC+V RF++G+++E+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPNEEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK++KLQIWDTAGQERFRTITQSYYRSANGV+I
Sbjct: 61 KTIAVEGKQIKLQIWDTAGQERFRTITQSYYRSANGVLI 99
>gi|195325951|ref|XP_002029694.1| GM25038 [Drosophila sechellia]
gi|194118637|gb|EDW40680.1| GM25038 [Drosophila sechellia]
Length = 219
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 85/99 (85%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++ +DFLFK+VLIGDCG GKTC+V RF++G+++E+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPNEEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK++KLQIWDTAGQERFRTITQSYYRSANGV+I
Sbjct: 61 KTIAVEGKQIKLQIWDTAGQERFRTITQSYYRSANGVLI 99
>gi|390343455|ref|XP_794320.3| PREDICTED: ras-related protein Rab-43-like [Strongylocentrotus
purpuratus]
Length = 220
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 80/86 (93%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK+VLIGD GVGKTCVV RF+SG F+EK +TIGVDF+MKT+NIDGKKVKLQ+
Sbjct: 20 DETFDYLFKIVLIGDAGVGKTCVVQRFKSGTFLEKQHSTIGVDFTMKTLNIDGKKVKLQV 79
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANGVII
Sbjct: 80 WDTAGQERFRTITQSYYRSANGVIIA 105
>gi|125980342|ref|XP_001354195.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|195167530|ref|XP_002024586.1| GL22545 [Drosophila persimilis]
gi|54642500|gb|EAL31247.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|194107991|gb|EDW30034.1| GL22545 [Drosophila persimilis]
Length = 219
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 82/90 (91%), Gaps = 3/90 (3%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
PN ++++DFLFK+VLIGDCG GKTC+V RF++G+++E+ GNTIGVDFSMKT+ ++ K+
Sbjct: 13 PN---EENFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIEVEAKQ 69
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTITQSYYRSANGV+I
Sbjct: 70 IKLQIWDTAGQERFRTITQSYYRSANGVLI 99
>gi|341890273|gb|EGT46208.1| hypothetical protein CAEBREN_29374 [Caenorhabditis brenneri]
Length = 210
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 79/85 (92%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD +D+LFK+VL+GD GVGKTCVV RFRSG+FV++ G TIGVDF+MKT+NIDGK+VKLQI
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNIDGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 64 WDTGGQERFRTITQSYYRSANGIVL 88
>gi|113679535|ref|NP_001038812.1| ras-related protein Rab-43 [Danio rerio]
gi|112419206|gb|AAI22422.1| Zgc:153788 [Danio rerio]
gi|182890198|gb|AAI65016.1| Zgc:153788 protein [Danio rerio]
Length = 208
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DDSYD +FK+VL+GD GVGKTCVV RF++G F+EK GNTIGVDF+MKT+ I GK+VKLQI
Sbjct: 7 DDSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQI 66
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTITQSYYRSANG II
Sbjct: 67 WDTAGQERFRTITQSYYRSANGAII 91
>gi|268552453|ref|XP_002634209.1| C. briggsae CBR-RAB-19 protein [Caenorhabditis briggsae]
Length = 209
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 79/85 (92%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD +D+LFK+VL+GD GVGKTCVV RFRSG+FV++ G TIGVDF+MKT+N+DGK+VKLQI
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNVDGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 64 WDTGGQERFRTITQSYYRSANGIVL 88
>gi|308491869|ref|XP_003108125.1| CRE-RAB-19 protein [Caenorhabditis remanei]
gi|308248973|gb|EFO92925.1| CRE-RAB-19 protein [Caenorhabditis remanei]
Length = 225
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 79/85 (92%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD +D+LFK+VL+GD GVGKTCVV RFRSG+FV++ G TIGVDF+MKT+N+DGK+VKLQI
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRSGNFVDRQGTTIGVDFTMKTLNVDGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 64 WDTGGQERFRTITQSYYRSANGIVL 88
>gi|260809960|ref|XP_002599772.1| hypothetical protein BRAFLDRAFT_113929 [Branchiostoma floridae]
gi|229285054|gb|EEN55784.1| hypothetical protein BRAFLDRAFT_113929 [Branchiostoma floridae]
Length = 217
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 83/100 (83%), Gaps = 7/100 (7%)
Query: 1 MSSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
MS+ L ND D +DFLFK+VLIGD GVGKTCVV RF+SG ++E+ G+TIGVDF+M
Sbjct: 7 MSTLLEND-------DGFDFLFKIVLIGDAGVGKTCVVQRFKSGTYMERCGSTIGVDFTM 59
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
KTV ID K+VKLQ+WDTAGQERFRTITQSYYRSANGVII
Sbjct: 60 KTVTIDDKRVKLQVWDTAGQERFRTITQSYYRSANGVIIA 99
>gi|324514540|gb|ADY45900.1| Ras-related protein Rab-43 [Ascaris suum]
Length = 210
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 78/85 (91%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DDS+DFLFK+VLIGD GVGKTCVV RF++G F+E+ G TIGVDF+MKT+ I+GK+VKLQI
Sbjct: 4 DDSFDFLFKIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFTMKTLVIEGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+I+
Sbjct: 64 WDTGGQERFRTITQSYYRSANGIIL 88
>gi|148225612|ref|NP_001089457.1| uncharacterized protein LOC734507 [Xenopus laevis]
gi|67678420|gb|AAH97569.1| MGC114765 protein [Xenopus laevis]
Length = 209
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 77/91 (84%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P+ D+ DFLFK++LIGD GVGKTCVV RFRSG F E+ G+TIGVDF+MKT+ I GK+
Sbjct: 4 PSGPPDELCDFLFKLILIGDAGVGKTCVVQRFRSGVFAERQGSTIGVDFTMKTLEIQGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
VKLQIWDTAGQERFRTITQSYYRSANG II
Sbjct: 64 VKLQIWDTAGQERFRTITQSYYRSANGAIIA 94
>gi|410918967|ref|XP_003972956.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 224
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 77/91 (84%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P QDDS+DFLFK++LIGD VGKTCVV F+SG F EK NTIGVDFS++TV I+GKK
Sbjct: 4 PGPEQDDSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSEKQQNTIGVDFSVRTVEIEGKK 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
VK+Q+WDTAGQERFRTITQSYYRSA+G +I
Sbjct: 64 VKIQVWDTAGQERFRTITQSYYRSAHGAVIA 94
>gi|312065340|ref|XP_003135743.1| Ras family protein [Loa loa]
gi|307769102|gb|EFO28336.1| Ras family protein [Loa loa]
Length = 209
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 78/85 (91%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DDS+DFLFK+VLIGD GVGKTCVV RF++G F+E+ G TIGVDFSMKT+ I+GK+VKLQI
Sbjct: 4 DDSFDFLFKIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFSMKTLIIEGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 64 WDTGGQERFRTITQSYYRSANGILL 88
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 80/89 (89%)
Query: 11 NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKV 70
NT ++S+DFLFK+V+IGDCG+GKT +V RF+SG F E+ NTIGVDF+MKT+ I+GK+V
Sbjct: 7 NTASEESFDFLFKIVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFAMKTIVIEGKQV 66
Query: 71 KLQIWDTAGQERFRTITQSYYRSANGVII 99
KLQIWDTAGQERFRTITQSYYRSANGV++
Sbjct: 67 KLQIWDTAGQERFRTITQSYYRSANGVLL 95
>gi|170588923|ref|XP_001899223.1| Ras family protein [Brugia malayi]
gi|158593436|gb|EDP32031.1| Ras family protein [Brugia malayi]
Length = 209
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 78/85 (91%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DDS+DFLFK+VLIGD GVGKTCVV RF++G F+E+ G TIGVDFSMKT+ I+GK+VKLQI
Sbjct: 4 DDSFDFLFKIVLIGDMGVGKTCVVQRFKNGTFIERQGTTIGVDFSMKTMIIEGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 64 WDTGGQERFRTITQSYYRSANGILL 88
>gi|89258445|gb|ABD65446.1| Rab41/43 [Suberites domuncula]
Length = 201
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 76/86 (88%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DDSYDFLFK+VLIGD GVGKTC V RF+ G ++E+ GNTIGVDF ++TV +DGK++KLQ+
Sbjct: 7 DDSYDFLFKLVLIGDAGVGKTCAVQRFKHGVYIERYGNTIGVDFMLRTVEVDGKRIKLQV 66
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYR A+GVI+
Sbjct: 67 WDTAGQERFRTITQSYYRGAHGVIVA 92
>gi|339235645|ref|XP_003379377.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316977954|gb|EFV60990.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 189
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 79/85 (92%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DS+D+LFK+VLIGD G+GKTCVV RF++G F+E+ G+TIGVDF+MKT+ +DGK+VKLQ+
Sbjct: 6 EDSFDYLFKIVLIGDMGIGKTCVVQRFKNGTFLERQGSTIGVDFTMKTLIVDGKRVKLQV 65
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+II
Sbjct: 66 WDTGGQERFRTITQSYYRSANGIII 90
>gi|62857817|ref|NP_001017246.1| ras-related protein Rab-19 [Xenopus (Silurana) tropicalis]
gi|123893500|sp|Q28IZ3.1|RAB19_XENTR RecName: Full=Ras-related protein Rab-19
gi|89268291|emb|CAJ82446.1| RAB19, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 213
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 77/90 (85%)
Query: 11 NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKV 70
N+ +DD +DFLFK++LIGD VGKTCVVHRF+SG F NTIGVDF+++ +NI+GKKV
Sbjct: 5 NSLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKV 64
Query: 71 KLQIWDTAGQERFRTITQSYYRSANGVIIG 100
K+Q+WDTAGQERFRTITQSYYRSA+G II
Sbjct: 65 KVQVWDTAGQERFRTITQSYYRSAHGAIIA 94
>gi|195012308|ref|XP_001983578.1| GH15503 [Drosophila grimshawi]
gi|193897060|gb|EDV95926.1| GH15503 [Drosophila grimshawi]
Length = 219
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 83/99 (83%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T +D++DFLFK+VLIGDC GKT ++ RF++G++VE+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPNEDNFDFLFKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK+VKLQIWDTAGQERFRTITQSYYR+ NGVII
Sbjct: 61 KTIEVEGKQVKLQIWDTAGQERFRTITQSYYRANNGVII 99
>gi|114794557|pdb|2HUP|A Chain A, Crystal Structure Of Human Rab43 In Complex With Gdp
gi|114794558|pdb|2HUP|B Chain B, Crystal Structure Of Human Rab43 In Complex With Gdp
Length = 201
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 75/86 (87%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQI
Sbjct: 23 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQI 82
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 83 WDTAGQERFRTITQSYYRSANGAILA 108
>gi|327265909|ref|XP_003217750.1| PREDICTED: ras-related protein Rab-43-like [Anolis carolinensis]
Length = 221
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 75/86 (87%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YDFLFK+VLIGD VGKTC+V RF++G F E+ GNTIGVDF+MK++ I GK+VKLQI
Sbjct: 21 EERYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGNTIGVDFTMKSLEIQGKRVKLQI 80
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 81 WDTAGQERFRTITQSYYRSANGAILA 106
>gi|326912237|ref|XP_003202460.1| PREDICTED: ras-related protein Rab-19-like [Meleagris gallopavo]
Length = 214
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 78/86 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD++D+LFK++LIGD VGKTCVVHRF++G F EK NTIGVDF++++++IDGKKVK+Q+
Sbjct: 9 DDAFDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGKKVKIQV 68
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G I+
Sbjct: 69 WDTAGQERFRTITQSYYRSAHGAILA 94
>gi|47222068|emb|CAG12094.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 76/91 (83%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P QDDS+DFLFK++LIGD VGKTCVV F+SG F K NTIGVDFS++TV I+GKK
Sbjct: 4 PGPEQDDSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSAKQQNTIGVDFSVRTVEIEGKK 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
VK+Q+WDTAGQERFRTITQSYYRSA+G II
Sbjct: 64 VKIQVWDTAGQERFRTITQSYYRSAHGAIIA 94
>gi|50728924|ref|XP_416347.1| PREDICTED: ras-related protein Rab-19 [Gallus gallus]
Length = 214
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 78/86 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD++D+LFK++LIGD VGKTCVVHRF++G F EK NTIGVDF++++++IDGKKVK+Q+
Sbjct: 9 DDAFDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGKKVKIQV 68
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G I+
Sbjct: 69 WDTAGQERFRTITQSYYRSAHGAILA 94
>gi|334342428|ref|XP_001378446.2| PREDICTED: ras-related protein Rab-43-like [Monodelphis domestica]
Length = 210
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 75/86 (87%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQI
Sbjct: 10 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGSFSERQGSTIGVDFTMKTLEIQGKRVKLQI 69
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 70 WDTAGQERFRTITQSYYRSANGAILA 95
>gi|195135342|ref|XP_002012093.1| GI16780 [Drosophila mojavensis]
gi|193918357|gb|EDW17224.1| GI16780 [Drosophila mojavensis]
Length = 219
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 83/99 (83%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++++DFLFK+VLIGDC GKT ++ RF++G++VE+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPNEENFDFLFKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK+VKLQIWDTAGQERFRTITQSYYR+ NGVII
Sbjct: 61 KTIEVEGKQVKLQIWDTAGQERFRTITQSYYRANNGVII 99
>gi|344275963|ref|XP_003409780.1| PREDICTED: ras-related protein Rab-43-like [Loxodonta africana]
Length = 212
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ GNTIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGNTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|297263149|ref|XP_001094209.2| PREDICTED: ras-related protein Rab-43-like [Macaca mulatta]
Length = 270
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 64/91 (70%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P T ++ S+DFLFK+VLIGD VGKTC+V RF++G F E+ G+TIGVDF+MK++ I GK+
Sbjct: 218 PKTHKE-SFDFLFKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIGVDFTMKSLEIQGKR 276
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
VKLQIWDTAGQERFRTITQSYYRSANG I+
Sbjct: 277 VKLQIWDTAGQERFRTITQSYYRSANGAILA 307
>gi|410907910|ref|XP_003967434.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 384
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/86 (69%), Positives = 77/86 (89%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DS+DFLFK++L+GD VGKTCVV F+SG F+EK NTIGVDF+++T++IDGKKVK+Q+
Sbjct: 176 EDSFDFLFKIILVGDSNVGKTCVVQSFKSGIFMEKQQNTIGVDFTVRTLDIDGKKVKMQV 235
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G ++
Sbjct: 236 WDTAGQERFRTITQSYYRSAHGAMVA 261
>gi|195375225|ref|XP_002046402.1| GJ12523 [Drosophila virilis]
gi|194153560|gb|EDW68744.1| GJ12523 [Drosophila virilis]
Length = 220
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 83/99 (83%), Gaps = 4/99 (4%)
Query: 5 LTNDHPNTF----QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
+T +P T ++++DFLFK+VLIGDC GKT ++ RF++G++VE+ GNTIGVDFSM
Sbjct: 1 MTARNPQTLMALPSEENFDFLFKIVLIGDCCTGKTSILQRFKTGNYVERHGNTIGVDFSM 60
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ ++GK+VKLQIWDTAGQERFRTITQSYYR+ NGVII
Sbjct: 61 KTIEVEGKQVKLQIWDTAGQERFRTITQSYYRANNGVII 99
>gi|348553989|ref|XP_003462808.1| PREDICTED: ras-related protein Rab-43-like [Cavia porcellus]
Length = 210
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 75/86 (87%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQI
Sbjct: 10 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQI 69
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 70 WDTAGQERFRTITQSYYRSANGAILA 95
>gi|147900245|ref|NP_001090134.1| ras-related protein Rab-19 [Xenopus laevis]
gi|123898987|sp|Q32NQ0.1|RAB19_XENLA RecName: Full=Ras-related protein Rab-19
gi|80476372|gb|AAI08533.1| MGC130981 protein [Xenopus laevis]
Length = 213
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 79/89 (88%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
+ +DD +DFLFK++LIGD VGKTCVVHRF+SG F++ NTIGVDF+++++NI+GKKVK
Sbjct: 6 SLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVK 65
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVIIG 100
+Q+WDTAGQERFRTITQSYYRSA+G II
Sbjct: 66 VQVWDTAGQERFRTITQSYYRSAHGAIIA 94
>gi|288965976|gb|ADC79634.1| Ras family protein [Ditylenchus destructor]
Length = 211
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 78/85 (91%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD++D+LFK+VLIGD GVGKTCVV RF++G ++EK G TIGVDF+MKT+ +DGK++KLQI
Sbjct: 4 DDTFDYLFKIVLIGDMGVGKTCVVQRFKNGSYIEKQGTTIGVDFTMKTLIVDGKRIKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+I+
Sbjct: 64 WDTGGQERFRTITQSYYRSANGIIL 88
>gi|156366235|ref|XP_001627045.1| predicted protein [Nematostella vectensis]
gi|156213942|gb|EDO34945.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
P+T ++ +D+LFK+VLIGD GVGKTC+V RFRSG FVE+ G+TIGVDF+M++V +D K
Sbjct: 3 EPST--EEFFDYLFKIVLIGDPGVGKTCIVQRFRSGTFVERNGSTIGVDFTMRSVQVDNK 60
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
K+KLQIWDTAGQERFRTITQSYYRS NGVII
Sbjct: 61 KIKLQIWDTAGQERFRTITQSYYRSCNGVIIA 92
>gi|325910899|ref|NP_001191816.1| ras-related protein Rab-43 isoform b [Homo sapiens]
gi|426342032|ref|XP_004036320.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Gorilla gorilla
gorilla]
Length = 155
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|332261803|ref|XP_003279956.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Nomascus
leucogenys]
Length = 155
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|66730539|ref|NP_001019502.1| ras-related protein Rab-43 [Rattus norvegicus]
gi|81887426|sp|Q53B90.1|RAB43_RAT RecName: Full=Ras-related protein Rab-43
gi|50898338|gb|AAT86135.1| Ras-related protein RAB43 [Rattus norvegicus]
Length = 210
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
QD+ YDFLFK+VL+GD VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQ
Sbjct: 9 QDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQ 68
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
IWDTAGQERFRTITQSYYRSANG I+
Sbjct: 69 IWDTAGQERFRTITQSYYRSANGAILA 95
>gi|50754287|ref|XP_414313.1| PREDICTED: ras-related protein Rab-43 [Gallus gallus]
Length = 215
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 76/86 (88%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++SYDFLFK+VLIGD VGKTC+V RF++G F E+ G+TIGVDF+MK++ I GK+VKLQI
Sbjct: 14 EESYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQI 73
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 74 WDTAGQERFRTITQSYYRSANGAILA 99
>gi|395516732|ref|XP_003762541.1| PREDICTED: ras-related protein Rab-43-like [Sarcophilus harrisii]
Length = 212
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 75/86 (87%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQI
Sbjct: 12 NEQYDFLFKLVLVGDASVGKTCVVQRFKTGSFSERQGSTIGVDFTMKTLEIQGKRVKLQI 71
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 72 WDTAGQERFRTITQSYYRSANGAILA 97
>gi|86476069|ref|NP_001034483.1| ras-related protein Rab-43 isoform a [Mus musculus]
gi|81914382|sp|Q8CG50.1|RAB43_MOUSE RecName: Full=Ras-related protein Rab-43
gi|26986192|emb|CAD58914.1| Ras-related protein Rab [Mus musculus]
gi|112293049|dbj|BAF02902.1| Rab41 [Mus musculus]
gi|148666805|gb|EDK99221.1| RIKEN cDNA 1810048P08, isoform CRA_c [Mus musculus]
Length = 210
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
QD+ YDFLFK+VL+GD VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQ
Sbjct: 9 QDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQ 68
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
IWDTAGQERFRTITQSYYRSANG I+
Sbjct: 69 IWDTAGQERFRTITQSYYRSANGAILA 95
>gi|17543864|ref|NP_502576.1| Protein RAB-19 [Caenorhabditis elegans]
gi|6425503|emb|CAB60605.1| Protein RAB-19 [Caenorhabditis elegans]
Length = 210
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 77/85 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD +D+LFK+VL+GD GVGKTCVV RFR+G FV++ G TIGVDF+MKT+ +DGK+VKLQI
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 64 WDTGGQERFRTITQSYYRSANGIVL 88
>gi|399163159|gb|AFP33155.1| rab-19, partial [Caenorhabditis elegans]
Length = 209
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 77/85 (90%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD +D+LFK+VL+GD GVGKTCVV RFR+G FV++ G TIGVDF+MKT+ +DGK+VKLQI
Sbjct: 3 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQI 62
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDT GQERFRTITQSYYRSANG+++
Sbjct: 63 WDTGGQERFRTITQSYYRSANGIVL 87
>gi|148666804|gb|EDK99220.1| RIKEN cDNA 1810048P08, isoform CRA_b [Mus musculus]
Length = 150
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
QD+ YDFLFK+VL+GD VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQ
Sbjct: 9 QDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQ 68
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
IWDTAGQERFRTITQSYYRSANG I+
Sbjct: 69 IWDTAGQERFRTITQSYYRSANGAILA 95
>gi|149036669|gb|EDL91287.1| Ras-related protein RAB43, isoform CRA_b [Rattus norvegicus]
Length = 157
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
QD+ YDFLFK+VL+GD VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQ
Sbjct: 9 QDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQ 68
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
IWDTAGQERFRTITQSYYRSANG I+
Sbjct: 69 IWDTAGQERFRTITQSYYRSANGAILA 95
>gi|395847163|ref|XP_003796253.1| PREDICTED: ras-related protein Rab-43 [Otolemur garnettii]
Length = 212
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 75/85 (88%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT++I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLDIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|149728237|ref|XP_001488993.1| PREDICTED: ras-related protein Rab-43-like [Equus caballus]
Length = 212
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|50234889|ref|NP_940892.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910891|ref|NP_001191812.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910893|ref|NP_001191813.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910895|ref|NP_001191814.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910897|ref|NP_001191815.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|332261797|ref|XP_003279953.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Nomascus
leucogenys]
gi|332261799|ref|XP_003279954.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Nomascus
leucogenys]
gi|332261801|ref|XP_003279955.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Nomascus
leucogenys]
gi|332817855|ref|XP_003339099.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|332817859|ref|XP_003310046.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Pan troglodytes]
gi|410037466|ref|XP_003950231.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|426342028|ref|XP_004036318.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Gorilla gorilla
gorilla]
gi|426342030|ref|XP_004036319.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Gorilla gorilla
gorilla]
gi|74727944|sp|Q86YS6.1|RAB43_HUMAN RecName: Full=Ras-related protein Rab-43; AltName: Full=Ras-related
protein Rab-41
gi|27549389|gb|AAO17291.1| RAB43 [Homo sapiens]
gi|38382891|gb|AAH62319.1| RAB43, member RAS oncogene family [Homo sapiens]
gi|119599689|gb|EAW79283.1| hCG2022580, isoform CRA_f [Homo sapiens]
gi|158255464|dbj|BAF83703.1| unnamed protein product [Homo sapiens]
gi|383413231|gb|AFH29829.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|384941264|gb|AFI34237.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|410219510|gb|JAA06974.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410251892|gb|JAA13913.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410301460|gb|JAA29330.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410331215|gb|JAA34554.1| RAB43, member RAS oncogene family [Pan troglodytes]
Length = 212
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|355714954|gb|AES05174.1| ras-related protein Rab-43-like protein [Mustela putorius furo]
Length = 211
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|402887099|ref|XP_003906942.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Papio anubis]
gi|402887101|ref|XP_003906943.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Papio anubis]
Length = 212
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|359322066|ref|XP_003639768.1| PREDICTED: ras-related protein Rab-43-like [Canis lupus familiaris]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|403268268|ref|XP_003926200.1| PREDICTED: ras-related protein Rab-43 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGTFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|47211718|emb|CAF95873.1| unnamed protein product [Tetraodon nigroviridis]
Length = 182
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 77/86 (89%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DS+DFLFK++L+GD VGKTCVV F+SG F+EK NTIGVDF+++T++IDGKKVK+Q+
Sbjct: 9 EDSFDFLFKIILVGDSNVGKTCVVQSFKSGIFMEKQQNTIGVDFTVRTIDIDGKKVKMQV 68
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G ++
Sbjct: 69 WDTAGQERFRTITQSYYRSAHGAMVA 94
>gi|348526560|ref|XP_003450787.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 224
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 78/93 (83%)
Query: 8 DHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDG 67
+ P DD++DFLFK+VLIGD VGKTCV+ F+SG F EK NTIGVDF+++T++I+G
Sbjct: 2 EMPAPEHDDTFDFLFKLVLIGDSNVGKTCVIQNFKSGIFSEKQQNTIGVDFTVRTLDIEG 61
Query: 68 KKVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
KKVK+Q+WDTAGQERFRTITQSYYRSA+G +I
Sbjct: 62 KKVKMQVWDTAGQERFRTITQSYYRSAHGAVIA 94
>gi|444512842|gb|ELV10184.1| Ras-related protein Rab-43 [Tupaia chinensis]
Length = 212
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 75/86 (87%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+++ GK+VKLQI
Sbjct: 12 DQQYDFLFKLVLVGDASVGKTCVVQRFKTGAFAERQGSTIGVDFTMKTLDVQGKRVKLQI 71
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G I+
Sbjct: 72 WDTAGQERFRTITQSYYRSASGAILA 97
>gi|417408694|gb|JAA50887.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 212
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 74/86 (86%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ YDFLFK+VL+GD VGKTCVV RF++G F E+ +TIGVDF+MKT+ I GK+VKLQI
Sbjct: 12 DEHYDFLFKLVLVGDASVGKTCVVQRFKTGVFSERQSSTIGVDFTMKTLEIQGKRVKLQI 71
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 72 WDTAGQERFRTITQSYYRSANGAILA 97
>gi|348519351|ref|XP_003447194.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 220
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 77/86 (89%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DS+DFLFK++L+GD VGKTCVV F+SG F+EK NTIGVDF+++T++IDGKKVK+Q+
Sbjct: 9 EDSFDFLFKIILVGDSDVGKTCVVQSFKSGIFIEKQQNTIGVDFTVRTLDIDGKKVKMQV 68
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G ++
Sbjct: 69 WDTAGQERFRTITQSYYRSAHGAMVA 94
>gi|432942757|ref|XP_004083059.1| PREDICTED: ras-related protein Rab-19-like isoform 1 [Oryzias
latipes]
Length = 222
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 76/87 (87%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
DDS+DFLFK++LIGD VGKTCVV F+SG F EK NTIGVDF+++T++I+GKKVK+Q
Sbjct: 8 HDDSFDFLFKIILIGDTNVGKTCVVQNFKSGVFSEKQQNTIGVDFTVRTLDIEGKKVKMQ 67
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
+WDTAGQERFRTITQSYYRSA+G +I
Sbjct: 68 VWDTAGQERFRTITQSYYRSAHGAMIA 94
>gi|431913720|gb|ELK15210.1| Ras-related protein Rab-43 [Pteropus alecto]
Length = 212
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 73/85 (85%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ +TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQSSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>gi|432862576|ref|XP_004069923.1| PREDICTED: ras-related protein Rab-19-like [Oryzias latipes]
Length = 218
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 80/94 (85%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DS+DFLFK++L+GD VGKTC+V F+SG F+EK NTIGVDF+++T++IDGKKVK+Q+
Sbjct: 9 EDSFDFLFKIILVGDSDVGKTCLVQSFKSGVFMEKQQNTIGVDFTVQTMDIDGKKVKMQV 68
Query: 75 WDTAGQERFRTITQSYYRSANGVIIGEILCFYGT 108
WDTAGQERFRTITQSYYRSA+G ++ + GT
Sbjct: 69 WDTAGQERFRTITQSYYRSAHGAVVAYDISRRGT 102
>gi|327272278|ref|XP_003220912.1| PREDICTED: ras-related protein Rab-19-like [Anolis carolinensis]
Length = 200
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVVHRF+SG + K NTIGVDF+++ + IDGKKVK+Q+
Sbjct: 9 DENFDYLFKIILIGDSNVGKTCVVHRFKSGQYHTKQQNTIGVDFTVRPIEIDGKKVKIQV 68
Query: 75 WDTAGQERFRTITQSYYRSANGVI-IGEILCF 105
WDTAGQERFRTITQSYYRS G++ + EIL F
Sbjct: 69 WDTAGQERFRTITQSYYRSNIGIVEVFEILTF 100
>gi|198426408|ref|XP_002122173.1| PREDICTED: similar to RAB43 protein [Ciona intestinalis]
Length = 210
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 11 NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKV 70
N +++YDFLFK++LIGD GVGKTC+V RF+SG ++E +TIGVDF MK+ ++DGK V
Sbjct: 2 NKEDNENYDFLFKIILIGDPGVGKTCIVQRFKSGLWLESQSSTIGVDFCMKSCHVDGKIV 61
Query: 71 KLQIWDTAGQERFRTITQSYYRSANGVI 98
KLQIWDTAGQERFRTITQ+YYRSANGV+
Sbjct: 62 KLQIWDTAGQERFRTITQTYYRSANGVL 89
>gi|344253374|gb|EGW09478.1| Ras-related protein Rab-43 [Cricetulus griseus]
Length = 201
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ YDFLFK+VL G+ VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQI
Sbjct: 1 DEHYDFLFKLVLGGEESVGKTCVVQRFKTGVFSARQGSTIGVDFTMKTLEIQGKRVKLQI 60
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSANG I+
Sbjct: 61 WDTAGQERFRTITQSYYRSANGAILA 86
>gi|338724303|ref|XP_001498622.3| PREDICTED: ras-related protein Rab-19-like [Equus caballus]
Length = 217
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV FRSG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFRSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|348579502|ref|XP_003475518.1| PREDICTED: ras-related protein Rab-19-like [Cavia porcellus]
Length = 217
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+ D+LFKV+LIGD VGKTCVV FRSG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DEDVDYLFKVILIGDSNVGKTCVVQHFRSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|403276230|ref|XP_003929809.1| PREDICTED: ras-related protein Rab-19 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIGEILCFYGT 108
WDTAGQERFRTITQSYYRSA+ II L + T
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIAYDLTRWST 104
>gi|296210478|ref|XP_002751979.1| PREDICTED: ras-related protein Rab-19 [Callithrix jacchus]
Length = 217
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIGEILCFYGT 108
WDTAGQERFRTITQSYYRSA+ II L + T
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIAYDLTRWST 104
>gi|440902734|gb|ELR53487.1| Ras-related protein Rab-19 [Bos grunniens mutus]
Length = 217
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG ++E NTIGVDF+++ + IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|431911652|gb|ELK13800.1| Ras-related protein Rab-19 [Pteropus alecto]
Length = 217
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYAETQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|410953063|ref|XP_003983195.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-19 [Felis
catus]
Length = 234
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|78042536|ref|NP_001030212.1| ras-related protein Rab-19 [Bos taurus]
gi|109892951|sp|Q3ZC27.1|RAB19_BOVIN RecName: Full=Ras-related protein Rab-19
gi|73587379|gb|AAI02962.1| RAB19, member RAS oncogene family [Bos taurus]
gi|296488160|tpg|DAA30273.1| TPA: RAB19, member RAS oncogene family [Bos taurus]
Length = 217
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG ++E NTIGVDF+++ + IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|395837388|ref|XP_003791617.1| PREDICTED: ras-related protein Rab-19 [Otolemur garnettii]
Length = 217
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|301756779|ref|XP_002914238.1| PREDICTED: ras-related protein Rab-19-like [Ailuropoda melanoleuca]
Length = 217
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|395539510|ref|XP_003771711.1| PREDICTED: ras-related protein Rab-19 [Sarcophilus harrisii]
Length = 217
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + + NTIGVDF+++++ +DGKKVK+QI
Sbjct: 11 DETFDYLFKIILIGDSNVGKTCVVQHFKSGLYTDSQQNTIGVDFTVRSLEVDGKKVKMQI 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSAN II
Sbjct: 71 WDTAGQERFRTITQSYYRSANAAIIA 96
>gi|119604354|gb|EAW83948.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 217
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|239915976|ref|NP_001008749.2| ras-related protein Rab-19 [Homo sapiens]
gi|114616316|ref|XP_001153248.1| PREDICTED: ras-related protein Rab-19 isoform 1 [Pan troglodytes]
gi|397484561|ref|XP_003813442.1| PREDICTED: ras-related protein Rab-19 [Pan paniscus]
gi|426358117|ref|XP_004046368.1| PREDICTED: ras-related protein Rab-19 [Gorilla gorilla gorilla]
gi|158513667|sp|A4D1S5.2|RAB19_HUMAN RecName: Full=Ras-related protein Rab-19
gi|187954847|gb|AAI40797.1| RAB19 protein [Homo sapiens]
Length = 217
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|387849222|ref|NP_001248483.1| ras-related protein Rab-19 [Macaca mulatta]
gi|383418347|gb|AFH32387.1| ras-related protein Rab-19 [Macaca mulatta]
Length = 217
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|57097619|ref|XP_539883.1| PREDICTED: ras-related protein Rab-19 [Canis lupus familiaris]
Length = 217
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|426228109|ref|XP_004008157.1| PREDICTED: ras-related protein Rab-19 [Ovis aries]
Length = 217
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++ + IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRALEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|350595168|ref|XP_003134657.2| PREDICTED: ras-related protein Rab-19-like [Sus scrofa]
Length = 154
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFKV+L+GD VGKTCVV F+SG + E NTIGVDF+++ + IDGKKVK+Q+
Sbjct: 11 DENFDYLFKVILVGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRALEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|33859608|ref|NP_035356.1| ras-related protein Rab-19 [Mus musculus]
gi|158518382|sp|P35294.3|RAB19_MOUSE RecName: Full=Ras-related protein Rab-19
gi|21411203|gb|AAH32936.1| RAB19, member RAS oncogene family [Mus musculus]
gi|112292995|dbj|BAF02875.1| Rab19 [Mus musculus]
gi|148681662|gb|EDL13609.1| RAB19, member RAS oncogene family [Mus musculus]
Length = 217
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|2598565|emb|CAA56644.1| rab19 [Mus musculus]
Length = 217
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|354481757|ref|XP_003503067.1| PREDICTED: ras-related protein Rab-19-like [Cricetulus griseus]
Length = 217
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|344238128|gb|EGV94231.1| Ras-related protein Rab-19 [Cricetulus griseus]
Length = 218
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|66730270|ref|NP_001019497.1| ras-related protein Rab-19 [Rattus norvegicus]
gi|81889125|sp|Q5M7U5.1|RAB19_RAT RecName: Full=Ras-related protein Rab-19
gi|56789734|gb|AAH88443.1| RAB19, member RAS oncogene family [Rattus norvegicus]
gi|149065308|gb|EDM15384.1| similar to RAB19, member RAS oncogene family [Rattus norvegicus]
Length = 217
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|281347015|gb|EFB22599.1| hypothetical protein PANDA_006037 [Ailuropoda melanoleuca]
Length = 196
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 70/81 (86%)
Query: 20 FLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTAG 79
F F++VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIWDTAG
Sbjct: 1 FPFQLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAG 60
Query: 80 QERFRTITQSYYRSANGVIIG 100
QERFRTITQSYYRSANG I+
Sbjct: 61 QERFRTITQSYYRSANGAILA 81
>gi|297717321|ref|XP_002834898.1| PREDICTED: ras-related protein Rab-43-like [Pongo abelii]
Length = 212
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 71/85 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTC+V RF++G F+E G+TIGVDF+MK + I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCMVQRFKTGAFLEGQGSTIGVDFTMKMLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQ+ FRTITQ YYRSANG I+
Sbjct: 73 DTAGQKWFRTITQRYYRSANGAILA 97
>gi|350588341|ref|XP_003129765.3| PREDICTED: ras-related protein Rab-26-like [Sus scrofa]
Length = 298
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|126340875|ref|XP_001375267.1| PREDICTED: ras-related protein Rab-19-like [Monodelphis domestica]
Length = 217
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + + NTIGVDF ++++ +DGKKVK+Q+
Sbjct: 11 DETFDYLFKIILIGDSNVGKTCVVQHFKSGIYTDTQQNTIGVDFMVRSLEVDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSAN II
Sbjct: 71 WDTAGQERFRTITQSYYRSANAAIIA 96
>gi|444728498|gb|ELW68955.1| Ras-related protein Rab-30 [Tupaia chinensis]
Length = 263
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|21361418|ref|NP_055303.2| ras-related protein Rab-30 [Homo sapiens]
gi|31560778|ref|NP_083770.2| ras-related protein Rab-30 [Mus musculus]
gi|115495465|ref|NP_001069697.1| ras-related protein Rab-30 [Bos taurus]
gi|386780907|ref|NP_001248052.1| ras-related protein Rab-30 [Macaca mulatta]
gi|57102328|ref|XP_533993.1| PREDICTED: ras-related protein Rab-30 [Canis lupus familiaris]
gi|114639563|ref|XP_001175176.1| PREDICTED: ras-related protein Rab-30 isoform 7 [Pan troglodytes]
gi|114639565|ref|XP_001175173.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan troglodytes]
gi|114639567|ref|XP_001175175.1| PREDICTED: ras-related protein Rab-30 isoform 6 [Pan troglodytes]
gi|114639569|ref|XP_001175170.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan troglodytes]
gi|114639571|ref|XP_001175166.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan troglodytes]
gi|149719267|ref|XP_001492126.1| PREDICTED: ras-related protein Rab-30-like [Equus caballus]
gi|291384169|ref|XP_002708711.1| PREDICTED: RAB30, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296216937|ref|XP_002754790.1| PREDICTED: ras-related protein Rab-30-like isoform 1 [Callithrix
jacchus]
gi|296216939|ref|XP_002754791.1| PREDICTED: ras-related protein Rab-30-like isoform 2 [Callithrix
jacchus]
gi|296216941|ref|XP_002754792.1| PREDICTED: ras-related protein Rab-30-like isoform 3 [Callithrix
jacchus]
gi|297689849|ref|XP_002822348.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pongo abelii]
gi|297689851|ref|XP_002822349.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pongo abelii]
gi|297689853|ref|XP_002822350.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pongo abelii]
gi|301780042|ref|XP_002925436.1| PREDICTED: ras-related protein Rab-30-like [Ailuropoda
melanoleuca]
gi|332211163|ref|XP_003254688.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Nomascus
leucogenys]
gi|332211165|ref|XP_003254689.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Nomascus
leucogenys]
gi|332211167|ref|XP_003254690.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Nomascus
leucogenys]
gi|332211169|ref|XP_003254691.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Nomascus
leucogenys]
gi|348565559|ref|XP_003468570.1| PREDICTED: ras-related protein Rab-30-like [Cavia porcellus]
gi|354489829|ref|XP_003507063.1| PREDICTED: ras-related protein Rab-30-like [Cricetulus griseus]
gi|395743310|ref|XP_003777901.1| PREDICTED: ras-related protein Rab-30 [Pongo abelii]
gi|395814755|ref|XP_003780907.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Otolemur
garnettii]
gi|395814757|ref|XP_003780908.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Otolemur
garnettii]
gi|397502808|ref|XP_003822035.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Pan paniscus]
gi|397502810|ref|XP_003822036.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Pan paniscus]
gi|397502812|ref|XP_003822037.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Pan paniscus]
gi|397502814|ref|XP_003822038.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Pan paniscus]
gi|397502816|ref|XP_003822039.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Pan paniscus]
gi|402894802|ref|XP_003910534.1| PREDICTED: ras-related protein Rab-30 [Papio anubis]
gi|403287762|ref|XP_003935099.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403287764|ref|XP_003935100.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403287766|ref|XP_003935101.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Saimiri
boliviensis boliviensis]
gi|410972563|ref|XP_003992728.1| PREDICTED: ras-related protein Rab-30 [Felis catus]
gi|426251519|ref|XP_004019469.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Ovis aries]
gi|426251521|ref|XP_004019470.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Ovis aries]
gi|426369956|ref|XP_004051946.1| PREDICTED: ras-related protein Rab-30 isoform 1 [Gorilla gorilla
gorilla]
gi|426369958|ref|XP_004051947.1| PREDICTED: ras-related protein Rab-30 isoform 2 [Gorilla gorilla
gorilla]
gi|426369960|ref|XP_004051948.1| PREDICTED: ras-related protein Rab-30 isoform 3 [Gorilla gorilla
gorilla]
gi|426369962|ref|XP_004051949.1| PREDICTED: ras-related protein Rab-30 isoform 4 [Gorilla gorilla
gorilla]
gi|426369964|ref|XP_004051950.1| PREDICTED: ras-related protein Rab-30 isoform 5 [Gorilla gorilla
gorilla]
gi|441645341|ref|XP_004090651.1| PREDICTED: ras-related protein Rab-30 [Nomascus leucogenys]
gi|38258937|sp|Q15771.2|RAB30_HUMAN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|68652043|sp|Q923S9.1|RAB30_MOUSE RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|116255980|sp|Q17QB7.1|RAB30_BOVIN RecName: Full=Ras-related protein Rab-30; Flags: Precursor
gi|15277920|gb|AAK94019.1|AF399756_1 RAB30 [Mus musculus]
gi|20379088|gb|AAM21104.1|AF498956_1 small GTP binding protein RAB30 [Homo sapiens]
gi|15559714|gb|AAH14213.1| RAB30, member RAS oncogene family [Homo sapiens]
gi|17028460|gb|AAH17550.1| RAB30, member RAS oncogene family [Mus musculus]
gi|49457208|emb|CAG46903.1| RAB30 [Homo sapiens]
gi|60814713|gb|AAX36314.1| RAB30 member RAS oncogene family [synthetic construct]
gi|74209184|dbj|BAE24976.1| unnamed protein product [Mus musculus]
gi|109659234|gb|AAI18449.1| RAB30, member RAS oncogene family [Bos taurus]
gi|112293021|dbj|BAF02888.1| Rab30 [Mus musculus]
gi|119595484|gb|EAW75078.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595485|gb|EAW75079.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595486|gb|EAW75080.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595487|gb|EAW75081.1| RAB30, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123984423|gb|ABM83557.1| RAB30, member RAS oncogene family [synthetic construct]
gi|123998391|gb|ABM86797.1| RAB30, member RAS oncogene family [synthetic construct]
gi|148674775|gb|EDL06722.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148674776|gb|EDL06723.1| RAB30, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068963|gb|EDM18515.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149068964|gb|EDM18516.1| RAB30, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|157928438|gb|ABW03515.1| RAB30, member RAS oncogene family [synthetic construct]
gi|158256188|dbj|BAF84065.1| unnamed protein product [Homo sapiens]
gi|189065406|dbj|BAG35245.1| unnamed protein product [Homo sapiens]
gi|261860434|dbj|BAI46739.1| RAB30, member RAS oncogene family [synthetic construct]
gi|281339635|gb|EFB15219.1| hypothetical protein PANDA_014945 [Ailuropoda melanoleuca]
gi|296471922|tpg|DAA14037.1| TPA: RAB30, member RAS oncogene family [Bos taurus]
gi|335773338|gb|AEH58359.1| Ras-related protein Rab-30-like protein [Equus caballus]
gi|351696042|gb|EHA98960.1| Ras-related protein Rab-30 [Heterocephalus glaber]
gi|355566910|gb|EHH23289.1| hypothetical protein EGK_06727 [Macaca mulatta]
gi|355752502|gb|EHH56622.1| hypothetical protein EGM_06073 [Macaca fascicularis]
gi|380811820|gb|AFE77785.1| ras-related protein Rab-30 [Macaca mulatta]
gi|384946490|gb|AFI36850.1| ras-related protein Rab-30 [Macaca mulatta]
gi|410206854|gb|JAA00646.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410254834|gb|JAA15384.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410290492|gb|JAA23846.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|410329963|gb|JAA33928.1| RAB30, member RAS oncogene family [Pan troglodytes]
gi|417397027|gb|JAA45547.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
gi|431838480|gb|ELK00412.1| Ras-related protein Rab-30 [Pteropus alecto]
gi|440906949|gb|ELR57158.1| Ras-related protein Rab-30 [Bos grunniens mutus]
Length = 203
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|334327772|ref|XP_001377113.2| PREDICTED: ras-related protein Rab-30-like [Monodelphis
domestica]
gi|395521092|ref|XP_003764654.1| PREDICTED: ras-related protein Rab-30 [Sarcophilus harrisii]
Length = 203
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|432102772|gb|ELK30248.1| Ras-related protein Rab-30 [Myotis davidii]
Length = 203
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|83754993|pdb|2EW1|A Chain A, Crystal Structure Of Rab30 In Complex With A Gtp Analogue
Length = 201
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 21 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 80
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 81 DTAGQERFRSITQSYYRSANALIL 104
>gi|34365467|emb|CAE46061.1| hypothetical protein [Homo sapiens]
Length = 164
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|327269229|ref|XP_003219397.1| PREDICTED: ras-related protein Rab-30-like [Anolis carolinensis]
Length = 203
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|224043682|ref|XP_002187756.1| PREDICTED: ras-related protein Rab-30 [Taeniopygia guttata]
gi|363729400|ref|XP_417213.3| PREDICTED: ras-related protein Rab-30 [Gallus gallus]
gi|449271458|gb|EMC81819.1| Ras-related protein Rab-30 [Columba livia]
Length = 203
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|344240431|gb|EGV96534.1| Ras-related protein Rab-30 [Cricetulus griseus]
Length = 201
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 2 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 62 DTAGQERFRSITQSYYRSANALIL 85
>gi|344293727|ref|XP_003418572.1| PREDICTED: ras-related protein Rab-30-like [Loxodonta africana]
Length = 205
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 69/82 (84%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIWDT
Sbjct: 8 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFR+ITQSYYRSAN +I+
Sbjct: 68 AGQERFRSITQSYYRSANALIL 89
>gi|326914544|ref|XP_003203585.1| PREDICTED: ras-related protein Rab-30-like [Meleagris gallopavo]
Length = 203
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|291413290|ref|XP_002722907.1| PREDICTED: RAB19, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 217
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ +D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++++ +DGK+VK+Q+
Sbjct: 11 EEDFDYLFKIILIGDSNVGKTCVVQHFKSGVYTESRQNTIGVDFTVRSLEVDGKRVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|444728384|gb|ELW68842.1| Ras-related protein Rab-19 [Tupaia chinensis]
Length = 217
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 75/94 (79%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF+++++ I GK+VK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEISGKRVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIGEILCFYGT 108
WDTAGQERFRTITQSYYRSA+ II L + T
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIAYDLTRHST 104
>gi|339522341|gb|AEJ84335.1| RAB30 [Capra hircus]
Length = 203
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y+FLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYEFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|147902880|ref|NP_001085176.1| RAB30, member RAS oncogene family [Xenopus laevis]
gi|47937791|gb|AAH72360.1| MGC83515 protein [Xenopus laevis]
Length = 203
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I G+K+KLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKIKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|54606871|ref|NP_001006108.1| RAB30, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49250515|gb|AAH74609.1| RAB30, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 203
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I G+K+KLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKIKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|344297148|ref|XP_003420261.1| PREDICTED: ras-related protein Rab-19-like [Loxodonta africana]
Length = 217
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++++D+LFK++LIGD VGKTCVV F SG + E NTIGVDF+++++ I+GKKVK+Q+
Sbjct: 11 EENFDYLFKIILIGDSNVGKTCVVQHFMSGVYTETQQNTIGVDFTVRSLEINGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>gi|348525384|ref|XP_003450202.1| PREDICTED: ras-related protein Rab-30-like [Oreochromis
niloticus]
Length = 203
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I G+KVKLQIW
Sbjct: 4 EDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|410910458|ref|XP_003968707.1| PREDICTED: ras-related protein Rab-30-like [Takifugu rubripes]
Length = 203
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I G+KVKLQIW
Sbjct: 4 EDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|432889723|ref|XP_004075330.1| PREDICTED: ras-related protein Rab-30-like [Oryzias latipes]
Length = 203
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I G+KVKLQIW
Sbjct: 4 EDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|1457956|gb|AAC50774.1| Rab30 [Homo sapiens]
Length = 203
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGV F +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVGFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>gi|12856302|dbj|BAB30625.1| unnamed protein product [Mus musculus]
Length = 203
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTA QERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAVQERFRSITQSYYRSANALIL 87
>gi|292627974|ref|XP_683305.2| PREDICTED: ras-related protein Rab-19-like [Danio rerio]
Length = 225
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ DFLFK++LIGD VGKTCV+ FRS + E NTIGVDF+++++++DG++VK+Q+
Sbjct: 17 EERCDFLFKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSMDVDGRRVKMQV 76
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+G +I
Sbjct: 77 WDTAGQERFRTITQSYYRSAHGAMIA 102
>gi|301764549|ref|XP_002917698.1| PREDICTED: ras-related protein Rab-43-like [Ailuropoda melanoleuca]
Length = 218
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 67/77 (87%)
Query: 24 VVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTAGQERF 83
+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIWDTAGQERF
Sbjct: 27 LVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERF 86
Query: 84 RTITQSYYRSANGVIIG 100
RTITQSYYRSANG I+
Sbjct: 87 RTITQSYYRSANGAILA 103
>gi|427792313|gb|JAA61608.1| Putative rab30, partial [Rhipicephalus pulchellus]
Length = 217
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KTV +DG+KVKLQIW
Sbjct: 11 EDYKFLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFLIKTVEVDGEKVKLQIW 70
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 71 DTAGQERFRSITQSYYRSAHALIL 94
>gi|57526504|ref|NP_001002750.1| ras-related protein Rab-30 [Danio rerio]
gi|49901476|gb|AAH76437.1| RAB30, member RAS oncogene family [Danio rerio]
Length = 201
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I G KVKLQIW
Sbjct: 2 EDYDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 62 DTAGQERFRSITQSYYRSANALIL 85
>gi|260781612|ref|XP_002585899.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|260812193|ref|XP_002600805.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
gi|229270964|gb|EEN41910.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|229286095|gb|EEN56817.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
Length = 206
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV++DG KVKLQIW
Sbjct: 2 EDYKFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDGDKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|443716907|gb|ELU08200.1| hypothetical protein CAPTEDRAFT_110813 [Capitella teleta]
Length = 203
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KTV IDG+KVKLQIW
Sbjct: 2 EDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIDGEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQ YYRSAN +I+
Sbjct: 62 DTAGQERFRSITQGYYRSANALIV 85
>gi|270005194|gb|EFA01642.1| hypothetical protein TcasGA2_TC007212 [Tribolium castaneum]
Length = 184
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV++D +KVKLQIW
Sbjct: 2 DDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDNEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|391338263|ref|XP_003743479.1| PREDICTED: ras-related protein Rab-30-like [Metaseiulus
occidentalis]
Length = 202
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KTV +DG KVKLQIW
Sbjct: 2 EDYKFLFKVVLIGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFLIKTVEVDGDKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHALVL 85
>gi|241616943|ref|XP_002408087.1| RAS family protein, putative [Ixodes scapularis]
gi|215502924|gb|EEC12418.1| RAS family protein, putative [Ixodes scapularis]
Length = 230
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KTV +DG+KVKLQIW
Sbjct: 23 EDYKFLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFLIKTVEVDGEKVKLQIW 82
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 83 DTAGQERFRSITQSYYRSAHALIL 106
>gi|357605862|gb|EHJ64809.1| hypothetical protein KGM_02869 [Danaus plexippus]
Length = 200
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV +DG+KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|156393822|ref|XP_001636526.1| predicted protein [Nematostella vectensis]
gi|156223630|gb|EDO44463.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D Y +LFK++L+GD VGKTC+V +F G F G TIGVDF++KTV++DG+KVKLQIW
Sbjct: 2 DDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYY +A+GVI+
Sbjct: 62 DTAGQERFRSITQSYYHNADGVIV 85
>gi|189236660|ref|XP_970787.2| PREDICTED: similar to Rab30 CG9100-PB [Tribolium castaneum]
Length = 203
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV++D +KVKLQIW
Sbjct: 2 DDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDNEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|312373301|gb|EFR21066.1| hypothetical protein AND_17638 [Anopheles darlingi]
Length = 189
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 69/86 (80%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
Q + Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV +D +K+KLQ
Sbjct: 36 QMEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDNQKIKLQ 95
Query: 74 IWDTAGQERFRTITQSYYRSANGVII 99
IWDTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 96 IWDTAGQERFRSITQSYYRSASALIL 121
>gi|242022587|ref|XP_002431721.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212517036|gb|EEB18983.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KT+ ID +KVKLQIW
Sbjct: 2 DDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTLEIDNEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|321476906|gb|EFX87865.1| hypothetical protein DAPPUDRAFT_95911 [Daphnia pulex]
Length = 177
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KTV IDG K+KLQIW
Sbjct: 2 EDYKYLFKVVLIGNAGVGKTCLVRRFTQGIFPPGQGATIGVDFMIKTVEIDGLKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|195050245|ref|XP_001992853.1| GH13416 [Drosophila grimshawi]
gi|193899912|gb|EDV98778.1| GH13416 [Drosophila grimshawi]
Length = 226
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|195116811|ref|XP_002002945.1| GI17653 [Drosophila mojavensis]
gi|193913520|gb|EDW12387.1| GI17653 [Drosophila mojavensis]
Length = 230
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|328716995|ref|XP_001945306.2| PREDICTED: ras-related protein Rab-30-like [Acyrthosiphon pisum]
Length = 201
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KT+ ID +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTIEIDNEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|405971526|gb|EKC36361.1| Ras-related protein Rab-30 [Crassostrea gigas]
Length = 202
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D Y +LFKVVLIG+ GVGKTC+V RF G F G TIGVDF +K+V ++G+K+KLQIW
Sbjct: 2 DDYKYLFKVVLIGEAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKSVEVNGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVIIGEILC 104
DTAGQERFR+ITQSYY SAN +I+ +C
Sbjct: 62 DTAGQERFRSITQSYYHSANALILVYDVC 90
>gi|194758323|ref|XP_001961411.1| GF14944 [Drosophila ananassae]
gi|190615108|gb|EDV30632.1| GF14944 [Drosophila ananassae]
Length = 225
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|196003094|ref|XP_002111414.1| hypothetical protein TRIADDRAFT_24368 [Trichoplax adhaerens]
gi|190585313|gb|EDV25381.1| hypothetical protein TRIADDRAFT_24368 [Trichoplax adhaerens]
Length = 215
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 70/85 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD L KV+++GD GVGKT ++HRF+S + EK +T+GVDF KT++ GKK+KLQIW
Sbjct: 15 EDYDMLLKVMIVGDAGVGKTALLHRFKSNAYNEKYSSTVGVDFFFKTIHSGGKKIKLQIW 74
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSY+RSANG+II
Sbjct: 75 DTAGQERFRTITQSYFRSANGIIIA 99
>gi|195434194|ref|XP_002065088.1| GK14858 [Drosophila willistoni]
gi|194161173|gb|EDW76074.1| GK14858 [Drosophila willistoni]
Length = 230
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|194862770|ref|XP_001970114.1| GG23555 [Drosophila erecta]
gi|190661981|gb|EDV59173.1| GG23555 [Drosophila erecta]
Length = 223
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|198476545|ref|XP_001357389.2| GA21542 [Drosophila pseudoobscura pseudoobscura]
gi|198137745|gb|EAL34458.2| GA21542 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|195155755|ref|XP_002018766.1| GL25775 [Drosophila persimilis]
gi|194114919|gb|EDW36962.1| GL25775 [Drosophila persimilis]
Length = 232
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|289741677|gb|ADD19586.1| GTPase Rab30 [Glossina morsitans morsitans]
Length = 179
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV +DG K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|19920864|ref|NP_609094.1| Rab30, isoform B [Drosophila melanogaster]
gi|24582407|ref|NP_723241.1| Rab30, isoform A [Drosophila melanogaster]
gi|24582410|ref|NP_723242.1| Rab30, isoform C [Drosophila melanogaster]
gi|386769264|ref|NP_001245926.1| Rab30, isoform D [Drosophila melanogaster]
gi|195338837|ref|XP_002036030.1| GM13645 [Drosophila sechellia]
gi|7297212|gb|AAF52477.1| Rab30, isoform A [Drosophila melanogaster]
gi|17945290|gb|AAL48702.1| RE14786p [Drosophila melanogaster]
gi|22945832|gb|AAN10612.1| Rab30, isoform B [Drosophila melanogaster]
gi|22945833|gb|AAN10613.1| Rab30, isoform C [Drosophila melanogaster]
gi|194129910|gb|EDW51953.1| GM13645 [Drosophila sechellia]
gi|220947990|gb|ACL86538.1| Rab30-PA [synthetic construct]
gi|220957300|gb|ACL91193.1| Rab30-PA [synthetic construct]
gi|383291378|gb|AFH03600.1| Rab30, isoform D [Drosophila melanogaster]
Length = 223
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|195471587|ref|XP_002088084.1| GE18380 [Drosophila yakuba]
gi|194174185|gb|EDW87796.1| GE18380 [Drosophila yakuba]
Length = 223
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|347967168|ref|XP_320947.5| AGAP002092-PA [Anopheles gambiae str. PEST]
gi|333469728|gb|EAA01022.5| AGAP002092-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV +D +K+KLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDNQKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSASALIL 85
>gi|195397965|ref|XP_002057598.1| GJ18220 [Drosophila virilis]
gi|194141252|gb|EDW57671.1| GJ18220 [Drosophila virilis]
Length = 225
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|307167586|gb|EFN61130.1| Ras-related protein Rab-30 [Camponotus floridanus]
Length = 183
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 72/89 (80%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
+F++D YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VK
Sbjct: 2 SFREDQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVK 61
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVIIG 100
LQIWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVA 90
>gi|307207011|gb|EFN84834.1| Ras-related protein Rab-30 [Harpegnathos saltator]
Length = 205
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|322796096|gb|EFZ18672.1| hypothetical protein SINV_00440 [Solenopsis invicta]
Length = 205
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|340710437|ref|XP_003393796.1| PREDICTED: ras-related protein Rab-30-like [Bombus terrestris]
gi|350427307|ref|XP_003494717.1| PREDICTED: ras-related protein Rab-30-like [Bombus impatiens]
Length = 205
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|66504348|ref|XP_395496.2| PREDICTED: ras-related protein Rab-30-like isoform 1 [Apis
mellifera]
gi|380026166|ref|XP_003696829.1| PREDICTED: ras-related protein Rab-30-like [Apis florea]
gi|383851999|ref|XP_003701518.1| PREDICTED: ras-related protein Rab-30-like [Megachile rotundata]
Length = 205
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|345484883|ref|XP_003425147.1| PREDICTED: ras-related protein Rab-30-like [Nasonia vitripennis]
Length = 205
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|340376183|ref|XP_003386613.1| PREDICTED: ras-related protein Rab-43-like [Amphimedon
queenslandica]
Length = 230
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Query: 2 SSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
S++L +P + S DFLFKV+LIGD GVGKT + RF+ G + E+ NTIGVDFS K
Sbjct: 7 SNNLVISYPANEEAHS-DFLFKVILIGDVGVGKTSALQRFKYGTYSERMVNTIGVDFSYK 65
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
T +DGK ++L IWDTAGQER+RTITQSYYR+A+GVI+
Sbjct: 66 TFKLDGKVIQLHIWDTAGQERYRTITQSYYRNAHGVIVA 104
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|332024592|gb|EGI64790.1| Ras-related protein Rab-30 [Acromyrmex echinatior]
Length = 205
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFKVVL+G+ GVGKTC+V RF G F G TIGVDF +KTV ++ +KVKLQIW
Sbjct: 2 EDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|390342568|ref|XP_003725687.1| PREDICTED: uncharacterized protein LOC762666 [Strongylocentrotus
purpuratus]
Length = 633
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 55/84 (65%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KT+ I G+KVKLQIW
Sbjct: 2 EDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTIEIGGEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYY SA+ +++
Sbjct: 62 DTAGQERFRSITQSYYHSADALVL 85
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|225713578|gb|ACO12635.1| Ras-related protein Rab-30 [Lepeophtheirus salmonis]
gi|290561959|gb|ADD38377.1| Ras-related protein Rab-30 [Lepeophtheirus salmonis]
Length = 203
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F G TIGVDF +KT+ I G+K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRQFTQGMFPPGQGATIGVDFMIKTLEIQGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHALIL 85
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 6 TNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNI 65
++ H + + YD+LFK++LIGD GVGK+C++ RF +VE +TIGVDF ++TV
Sbjct: 48 SSSHRSKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQ 107
Query: 66 DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
DGK +KLQIWDTAGQERFRTIT SYYR A+G+II
Sbjct: 108 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 141
>gi|156390266|ref|XP_001635192.1| predicted protein [Nematostella vectensis]
gi|156222283|gb|EDO43129.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
Query: 1 MSSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
M S L DH FQ YD+LFK++LIGD GVGK+C++ RF E TIGVDF +
Sbjct: 1 MDSDLPADH--EFQ---YDYLFKILLIGDSGVGKSCLLLRFVDDSHRESYQTTIGVDFKI 55
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
KT+ +DGK VKLQIWDTAGQERFRTIT SYYR A+GV+I
Sbjct: 56 KTMRVDGKVVKLQIWDTAGQERFRTITSSYYRGAHGVMI 94
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 71/96 (73%)
Query: 4 SLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTV 63
L N N ++ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+
Sbjct: 111 PLKNLGENNYEPSRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI 170
Query: 64 NIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
+DGK VKLQIWDTAGQERFRTIT SYYR A+G+ +
Sbjct: 171 ELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICV 206
>gi|449482073|ref|XP_004175981.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-19
[Taeniopygia guttata]
Length = 253
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 72/93 (77%), Gaps = 6/93 (6%)
Query: 8 DHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDG 67
+HP FLFK+ L+ + VGK+CVVHRF++G +K N+IGVDF++ +++IDG
Sbjct: 47 EHPKA------PFLFKIFLLANPIVGKSCVVHRFKTGQCKKKQQNSIGVDFTVHSMDIDG 100
Query: 68 KKVKLQIWDTAGQERFRTITQSYYRSANGVIIG 100
KK+K+Q+WDTAGQERFRTITQSYYRSA+G I+
Sbjct: 101 KKMKIQVWDTAGQERFRTITQSYYRSAHGAILA 133
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 203
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 204
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|12214171|emb|CAC21570.1| putative small GTP-binding protein (rab1b) [Homo sapiens]
Length = 163
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 70/91 (76%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
P + + YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK
Sbjct: 21 RPXSSXNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK 80
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 81 TIKLQIWDTAGQERFRTITSSYYRGAHGIIV 111
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a;
AltName: Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +VE +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK+ LIGD GVGK+C++ RF ++E NTIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +VE +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|72136116|ref|XP_795833.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
gi|115689778|ref|XP_001199469.1| PREDICTED: ras-related protein Rab-30-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KT+ I G+KVKLQIW
Sbjct: 2 EDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTIEIGGEKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYY SA+ +++
Sbjct: 62 DTAGQERFRSITQSYYHSADALVL 85
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 980 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 1039
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 1040 AGQERFRTITSSYYRGAHGICV 1061
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +VE +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|195577211|ref|XP_002078466.1| GD22516 [Drosophila simulans]
gi|194190475|gb|EDX04051.1| GD22516 [Drosophila simulans]
Length = 223
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y FLFK+VL+G+ GVGKTC+V RF G F G TIGVDF +K V ++G+K+KLQIW
Sbjct: 2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKKVEVEGEKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ TQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSSTQSYYRSAHALIL 85
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
T + YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +K
Sbjct: 4 TIMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 63
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVII 99
LQIWDTAGQERFRTIT SYYR A+G+II
Sbjct: 64 LQIWDTAGQERFRTITSSYYRGAHGIII 91
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis
niloticus]
Length = 212
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF F E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A G+II
Sbjct: 65 AGQERFRTITSSYYRGAQGIII 86
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF F E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A G+II
Sbjct: 65 AGQERFRTITSSYYRGAQGIII 86
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF F E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A G+II
Sbjct: 65 AGQERFRTITSSYYRGAQGIII 86
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|351726990|ref|NP_001238169.1| GTP binding protein [Glycine max]
gi|450635|gb|AAA50159.1| GTP binding protein [Glycine max]
Length = 218
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ANG+II
Sbjct: 62 WDTAGQERFRTITSSYYRGANGIII 86
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +V+ +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|339243319|ref|XP_003377585.1| GTP-binding protein YPT1 [Trichinella spiralis]
gi|316973603|gb|EFV57170.1| GTP-binding protein YPT1 [Trichinella spiralis]
Length = 219
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVLIG+ GVGKTC+V +F G F TIGVDF +KT+ +DG KVKLQIW
Sbjct: 2 EDYKYLFKVVLIGNAGVGKTCLVRKFTQGVFPPGQTATIGVDFMIKTLLVDGDKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +I+
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIIL 85
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 71/93 (76%)
Query: 7 NDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNID 66
N+ P Q YD LFK+VLIG+ GVGK+C++ R+ F + NTIGVDF +KT+N+
Sbjct: 2 NNTPYQEQSQEYDHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQ 61
Query: 67 GKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
GK++KLQIWDTAGQ+RF+TIT +YYR A+G+++
Sbjct: 62 GKQIKLQIWDTAGQDRFKTITTNYYRGAHGIVV 94
>gi|71410660|ref|XP_807614.1| small GTP-binding protein Rab1 [Trypanosoma cruzi strain CL
Brener]
gi|70871653|gb|EAN85763.1| small GTP-binding protein Rab1, putative [Trypanosoma cruzi]
Length = 210
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK VKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 684 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 743
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 744 GQERFRTITSSYYRGAHGIIV 764
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 906 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 965
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 966 AGQERFRTITSSYYRGAHGICV 987
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYDFLFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 SYDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITNAYYRGAMGILL 86
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +V+ +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV +DGK +KLQIWDT
Sbjct: 7 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 66
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 67 AGQERFRTITSSYYRGAHGIIV 88
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD VGK+C++ RF FV+ +TIGVDF ++TV++DGK VKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDT 66
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 67 AGQERFRTITSSYYRGAHGIII 88
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 39 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 98
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 99 WDTAGQERFRTITSSYYRGAHGIIV 123
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 1 MSSSLTNDHPNTFQ-DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFS 59
MSS+ + P + +YD+LFK++LIGD GVGKTC++ RF F +TIG+DF
Sbjct: 1 MSSAAGSSTPTSIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFK 60
Query: 60 MKTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
++TV IDGK++KLQ+WDTAGQERFRTIT +YYR A G+++
Sbjct: 61 IQTVEIDGKRIKLQVWDTAGQERFRTITTAYYRGAMGILL 100
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 57 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 116
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 117 WDTAGQERFRTITSSYYRGAHGIIV 141
>gi|328868471|gb|EGG16849.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 207
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF G +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/91 (56%), Positives = 70/91 (76%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
P + +YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GK
Sbjct: 1824 QPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGK 1883
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVII 99
K+KLQ+WDTAGQERF+TIT +YYR A G+I+
Sbjct: 1884 KIKLQVWDTAGQERFKTITTAYYRGAMGIIL 1914
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YDFLFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
S D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 135 SSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 194
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 195 TAGQERFRTITSSYYRGAHGIIV 217
>gi|354482851|ref|XP_003503609.1| PREDICTED: ras-related protein Rab-43-like [Cricetulus griseus]
Length = 203
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 65/77 (84%)
Query: 24 VVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTAGQERF 83
+VL G+ VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQIWDTAGQERF
Sbjct: 12 LVLGGEESVGKTCVVQRFKTGVFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERF 71
Query: 84 RTITQSYYRSANGVIIG 100
RTITQSYYRSANG I+
Sbjct: 72 RTITQSYYRSANGAILA 88
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 69
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 70 AGQERFRTITSSYYRGAHGIIV 91
>gi|407835694|gb|EKF99361.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 206
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK VKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV ++GK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|410932295|ref|XP_003979529.1| PREDICTED: ras-related protein Rab-1B-like [Takifugu rubripes]
Length = 214
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G++I
Sbjct: 65 AGQERFRTITSSYYRGAHGIVI 86
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 12 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 71
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 72 WDTAGQERFRTITSSYYRGAHGIIV 96
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|343475422|emb|CCD13178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|291241694|ref|XP_002740747.1| PREDICTED: RAB30, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 202
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVLIG+ GVGKTC+V RF G F G TIGVDF +KTV I KVKLQIW
Sbjct: 2 EDYKYLFKVVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVQIGDDKVKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSADALVV 85
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
Length = 181
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIV 87
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|343470855|emb|CCD16567.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++TV +DGK +KLQI
Sbjct: 4 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ANG+II
Sbjct: 64 WDTAGQERFRTITSSYYRGANGIII 88
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium
distachyon]
Length = 203
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
T YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VK
Sbjct: 23 TMHASEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVK 82
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVII 99
LQIWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 83 LQIWDTAGQERFRTITSSYYRGAHGIIV 110
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIII 89
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis
domestica]
Length = 201
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV +DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIV 87
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium
distachyon]
Length = 203
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp
At Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp
At Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
Length = 175
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIV 87
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 70 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 129
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 130 WDTAGQERFRTITSSYYRGAHGIIV 154
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 10 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 69
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 70 WDTAGQERFRTITSSYYRGAHGIIV 94
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YDFLFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGKTC++ RF +F +TIG+DF +KT+++DGKKVKLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERF+TIT +YYR A G+I+
Sbjct: 65 AGQERFKTITTAYYRGAMGIIL 86
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta
CCMP2712]
Length = 200
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 15 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 74
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 75 WDTAGQERFRTITSSYYRGAHGIIV 99
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 65 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 124
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 125 WDTAGQERFRTITSSYYRGAHGIIV 149
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 SYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|159906365|gb|ABX10871.1| RAB1A-like protein [Capra hircus]
Length = 161
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAENTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 66 AGQERFRTITSSYYRGAHGIII 87
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 2 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIV 84
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|431910239|gb|ELK13312.1| Ras-related protein Rab-1B [Pteropus alecto]
Length = 247
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 68/86 (79%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 74 IWDTAGQERFRTITQSYYRSANGVII 99
IWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis
niloticus]
Length = 200
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGKTC++ RF +F +TIG+DF +KT+ +DGKKVKLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERF+TIT +YYR A G+I+
Sbjct: 65 AGQERFKTITTAYYRGAMGIIL 86
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium
distachyon]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 66 AGQERFRTITSSYYRGAHGIII 87
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium
distachyon]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV D K +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|340379533|ref|XP_003388281.1| PREDICTED: ras-related protein Rab-30-like [Amphimedon
queenslandica]
Length = 212
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK+VLIGD GVGKT +V R+ G F TIGVDF +KT++++G +KLQIWDT
Sbjct: 5 YDFLFKIVLIGDAGVGKTSIVRRYTDGVFTSAGIPTIGVDFCIKTLSVNGSAIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTITQSYYRSA+ +++
Sbjct: 65 AGQERFRTITQSYYRSADAIVL 86
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium
castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 46 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 105
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 106 WDTAGQERFRTITSSYYRGAHGIIV 130
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV ++GK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|119620331|gb|EAW99925.1| RAB1A, member RAS oncogene family, isoform CRA_h [Homo sapiens]
Length = 102
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFLFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 57 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 116
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 117 WDTAGQERFRTITSSYYRGAHGIIV 141
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 37 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 96
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 97 WDTAGQERFRTITSSYYRGAHGIIV 121
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 68/86 (79%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVA 90
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGKTC++ RF +F +TIG+DF +KT+++DGKKVKLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERF+TIT +YYR A G+I+
Sbjct: 65 AGQERFKTITTAYYRGAMGIIL 86
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 4 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 64 WDTAGQERFRTITSSYYRGAHGIIV 88
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIIL 86
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV+++GK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 68/91 (74%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
+P YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK
Sbjct: 2 NPECCPQPPYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK 61
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVII 99
VKLQIWDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 TVKLQIWDTAGQERFRTITSSYYRGAHGICV 92
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1
[Oryctolagus cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda
melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1
[Strongylocentrotus purpuratus]
Length = 206
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 69/86 (80%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
++D D+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQ
Sbjct: 5 EEDGSDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 64
Query: 74 IWDTAGQERFRTITQSYYRSANGVII 99
IWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 IWDTAGQERFRTITSSYYRGAHGIIV 90
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVA 90
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 10 NPEYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 69
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 70 WDTAGQERFRTITSSYYRGAHGIIV 94
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 133 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 192
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 193 GQERFRTITSSYYRGAHGIIV 213
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 21 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 80
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 81 TAGQERFRTITSSYYRGAHGIIV 103
>gi|241998682|ref|XP_002433984.1| RAS-related protein, putative [Ixodes scapularis]
gi|215495743|gb|EEC05384.1| RAS-related protein, putative [Ixodes scapularis]
Length = 155
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 68/86 (79%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVA 90
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFLFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+++DGKK+KLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 SYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium
distachyon]
Length = 212
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++TV IDGK +KLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR ANG+II
Sbjct: 63 DTAGQERFRTITSSYYRGANGIII 86
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRT+T SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTVTSSYYRGAHGIIV 86
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+++
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIVV 86
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +V +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ IDGK VKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|355714860|gb|AES05141.1| RAB1A, member RAS oncoprotein family [Mustela putorius furo]
Length = 195
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 51 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 110
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 111 WDTAGQERFRTITSSYYRGAHGIIV 135
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|148675884|gb|EDL07831.1| RAB1, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149044747|gb|EDL97933.1| rCG23301, isoform CRA_a [Rattus norvegicus]
Length = 99
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK+++IGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 4 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 63
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 64 WDTAGQERFRTITSSYYRGAHGIIV 88
>gi|268560906|ref|XP_002646318.1| C. briggsae CBR-RAB-8 protein [Caenorhabditis briggsae]
Length = 211
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIIL 86
>gi|308485078|ref|XP_003104738.1| CRE-RAB-8 protein [Caenorhabditis remanei]
gi|308257436|gb|EFP01389.1| CRE-RAB-8 protein [Caenorhabditis remanei]
Length = 211
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIIL 86
>gi|154550427|gb|ABS83488.1| RAB1 [Haliotis cracherodii]
Length = 140
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIV 89
>gi|148701156|gb|EDL33103.1| RAB1B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 189
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 68/82 (82%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++T+++DGK VKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWDT 66
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 67 AGQERFRTITSSYYRGAHGIII 88
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++TV++DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRT+T SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTVTSSYYRGAHGIIV 86
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|344245132|gb|EGW01236.1| Ras-like GTP-binding protein YPT1 [Cricetulus griseus]
Length = 96
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|327286112|ref|XP_003227775.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 138
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|119620325|gb|EAW99919.1| RAB1A, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 122
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIV 89
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFLFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIIL 86
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|341875743|gb|EGT31678.1| hypothetical protein CAEBREN_09245 [Caenorhabditis brenneri]
gi|341876669|gb|EGT32604.1| hypothetical protein CAEBREN_03557 [Caenorhabditis brenneri]
Length = 211
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIIL 86
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFLFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T++IDGK +KLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLDIDGKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 34 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 94 AGQERFRTITSSYYRGAHGIIV 115
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV++DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT YYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSGYYRGAHGIIV 86
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQER RTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERLRTITSSYYRGAHGIIV 89
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NQEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|302855274|ref|XP_002959134.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|549810|sp|P36862.1|YPTV3_VOLCA RecName: Full=GTP-binding protein yptV3
gi|409164|gb|AAA34252.1| GTP-binding protein [Volvox carteri]
gi|300255496|gb|EFJ39798.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 203
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 66/83 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
DS+D+ FKV+L+GD GVGK+C++ RF SG F E T +TIGVDF +K + DGK+ KL IW
Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVI 98
DTAGQERFRT+T SYYR A G+I
Sbjct: 64 DTAGQERFRTLTSSYYRGAQGII 86
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGKTC++ RF +F +TIG+DF +KT+ ++GKKVKLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERF+TIT +YYR A G+I+
Sbjct: 65 AGQERFKTITTAYYRGAMGIIL 86
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173
SS5]
Length = 204
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD VGK+C++ RF +++ +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 3 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 62
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 63 TAGQERFRTITTAYYRGAMGIIL 85
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV ++GK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|344239738|gb|EGV95841.1| Protein FAM59B [Cricetulus griseus]
Length = 826
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/83 (62%), Positives = 64/83 (77%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTCV+ RF F +TIG+DF +KTV + GKK+KLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITTSYYRGAMGIML 87
>gi|198422153|ref|XP_002119751.1| PREDICTED: similar to RAB8B, member RAS oncogene family [Ciona
intestinalis]
Length = 177
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+++DGKKVKLQIWD
Sbjct: 8 TYDYLFKLLLIGDSGVGKTCVLFRFSEDHFNSTFISTIGIDFKIRTIDLDGKKVKLQIWD 67
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 68 TAGQERFRTITTAYYRGAMGIML 90
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 69/89 (77%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
T + YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK +K
Sbjct: 2 TTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIK 61
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVIIG 100
LQIWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVA 90
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV D K +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK+VLIGD GVGK+C++ RF F E +TIGVDF +TV ID K VKLQIWDT
Sbjct: 12 YDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 72 AGQERFRTITSAYYRGADGIIM 93
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+++
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIMV 89
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEKDGKTIKLXIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYREAHGIII 86
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV+++GK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|323450177|gb|EGB06060.1| hypothetical protein AURANDRAFT_38219 [Aureococcus
anophagefferens]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+C++ RF F E +TIGVDF +TV +DGK VKLQIWDT
Sbjct: 6 YDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 66 AGQERFRTITSAYYRGADGIIM 87
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIW
Sbjct: 3 NDYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|38048055|gb|AAR09930.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 119
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis
CBS 6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis
CBS 6054]
Length = 208
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N++GK +KLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLEGKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 66 AGQERFRTITSSYYRGAHGIII 87
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 SYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii
H99]
Length = 205
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|169806162|ref|XP_001827826.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
gi|161779274|gb|EDQ31297.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
Length = 200
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+++YD+LFK++LIGD GVGKTC++ R+ + E +TIGVDF +KT+ ++GKKVKLQI
Sbjct: 2 ENAYDYLFKIILIGDSGVGKTCLLQRYTDNVYNESFQSTIGVDFKIKTIKLNGKKVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERF++I +YYR ANGV +
Sbjct: 62 WDTAGQERFKSIVSNYYRGANGVFL 86
>gi|38048295|gb|AAR10050.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 123
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIV 87
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|270010835|gb|EFA07283.1| hypothetical protein TcasGA2_TC014518 [Tribolium castaneum]
Length = 208
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+++DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b;
AltName: Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ I
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICI 86
>gi|403362358|gb|EJY80906.1| Ras-related gtp-binding protein [Oxytricha trifallax]
Length = 224
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 67/84 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
++D+L K++LIGD GVGKTC + RF +F +TIG+DF +KT+NIDGK VKLQIWD
Sbjct: 7 AFDYLIKLILIGDSGVGKTCFLLRFADDNFTSSHISTIGIDFKIKTINIDGKNVKLQIWD 66
Query: 77 TAGQERFRTITQSYYRSANGVIIG 100
TAGQERFRTITQ+YY+ A G+I+
Sbjct: 67 TAGQERFRTITQTYYKGAMGIILA 90
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV ++GK VKLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +D K +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|1619851|gb|AAB16971.1| rab8-like, partial [Caenorhabditis elegans]
Length = 123
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+I+
Sbjct: 64 TAGQERFRTITTAYYRGAMGIIL 86
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName:
Full=GTP-binding protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P T + +YDFL K++LIGD GVGK+C++ RF G F TIG+DF ++T+ ++GK+
Sbjct: 4 PATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV ++GK VKLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|409046611|gb|EKM56091.1| hypothetical protein PHACADRAFT_257157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D YD+LFK++LIGD GVGK+C++ RF F + +TIGVDF ++T++++GK VKLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIDLEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTI +YYR A+G+I+
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIIV 86
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 248
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWD
Sbjct: 21 AYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 80
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+ +
Sbjct: 81 TAGQERFRTITSSYYRGAHGICV 103
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D YD+LFK++LIGD GVGK+C++ RF F + +TIGVDF ++T+ ++GK VKLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTI +YYR A+G+++
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIVV 86
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+N+D K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGKTC++ RF ++ +TIG+DF +KT+ +DGKKVKLQ+WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERF+TIT +YYR A G+I+
Sbjct: 65 AGQERFKTITTAYYRGAMGIIL 86
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|47209142|emb|CAF90455.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 68/81 (83%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF G + + +TIGVDF ++TV++DGK VKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADGAYTDSYISTIGVDFKIRTVDMDGKTVKLQIWDTA 60
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+++
Sbjct: 61 GQERFRTITSSYYRGAHGIVL 81
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+++DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|170574453|ref|XP_001892820.1| Ras-related protein Rab-30 [Brugia malayi]
gi|158601425|gb|EDP38340.1| Ras-related protein Rab-30, putative [Brugia malayi]
Length = 197
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV +D K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVDDDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|402591009|gb|EJW84939.1| hypothetical protein WUBG_04149 [Wuchereria bancrofti]
Length = 193
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV +D K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVDDDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK+ LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 5 YDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 69/84 (82%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIW
Sbjct: 2 EEHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 DTAGQERFRTITSSYYRGAHGIIV 85
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 18 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWD 77
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 78 TAGQERFRTITTAYYRGAMGIML 100
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAG+ERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGEERFRTITSSYYRGAHGIIV 89
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+IDGKK+KLQ+WD
Sbjct: 29 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVWD 88
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 89 TAGQERFKTITTAYYRGAMGIIL 111
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis
niloticus]
Length = 206
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c;
AltName: Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis
thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis
thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFLFK++LIGD GVGKTC++ RF F +TIG+DF ++TV I+GKK+KLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|91083485|ref|XP_971858.1| PREDICTED: similar to ras-related protein Rab-8A, putative
[Tribolium castaneum]
Length = 221
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+++DGKK+KLQIWD
Sbjct: 17 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWD 76
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 77 TAGQERFRTITTAYYRGAMGIML 99
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRT+T SYYR A+G+II
Sbjct: 62 WDTAGQERFRTMTSSYYRGAHGIII 86
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + + TIGVDF ++TV++DGK VKLQI
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 51 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 110
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 111 AGQERFRTITSSYYRGAHGICV 132
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|341881024|gb|EGT36959.1| hypothetical protein CAEBREN_29013, partial [Caenorhabditis
brenneri]
Length = 121
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 60/64 (93%)
Query: 36 CVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSAN 95
CVV RFRSG+FV++ G TIGVDF+MKT+NIDGK+VKLQIWDT GQERFRTITQSYYRSAN
Sbjct: 2 CVVQRFRSGNFVDRQGTTIGVDFTMKTLNIDGKRVKLQIWDTGGQERFRTITQSYYRSAN 61
Query: 96 GVII 99
G+++
Sbjct: 62 GIVL 65
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ D+LFK++LIGD GVGK+C++ RF + + TIGVDF +KTV IDGK VKLQIW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A G+I+
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIV 86
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIW
Sbjct: 26 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 85
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+ +
Sbjct: 86 DTAGQERFRTITSSYYRGAHGICV 109
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%)
Query: 2 SSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
+S + +D YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++
Sbjct: 9 TSPVQSDAARVKVGQGYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIR 68
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
T+ +DGK VKLQIWDTAGQERFRTIT SYYR A+G+ +
Sbjct: 69 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICV 106
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITASYYRGAHGIIV 87
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis
niloticus]
Length = 206
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/82 (60%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ + GK VKLQIWDT
Sbjct: 138 YDLLFKLLLIGDSGVGKSCLLLRFADDSYSDSYISTIGVDFKIRTIELGGKTVKLQIWDT 197
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 198 AGQERFRTITSSYYRGAHGIIV 219
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFLFK++LIGD GVGKTC++ RF F +TIG+DF ++TV+I+GKK+KLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 2 EYDALFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIV 84
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWD
Sbjct: 8 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 67
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+ +
Sbjct: 68 TAGQERFRTITSSYYRGAHGICV 90
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV D K +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 65 AGQERFRTITSSYYRGAHGICV 86
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 69/83 (83%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
S+D+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+++DGK +KLQIWD
Sbjct: 2 SFDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWD 61
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIV 84
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 18 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 77
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 78 AGQERFRTITSSYYRGAHGICV 99
>gi|238581626|ref|XP_002389670.1| hypothetical protein MPER_11169 [Moniliophthora perniciosa FA553]
gi|215452189|gb|EEB90600.1| hypothetical protein MPER_11169 [Moniliophthora perniciosa FA553]
Length = 120
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIV 87
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 66/85 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK+ LIGD GVGK+C++ RF ++E +TIGVDF ++TV D K +KLQI
Sbjct: 2 NPEYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YDFLF+++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQI
Sbjct: 2 NPEYDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 20 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 79
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 80 TAGQERFRTITTAYYRGAMGIML 102
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T++++GK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ D+LFK++LIGD GVGK+C++ RF + + TIGVDF +KTV IDGK VKLQIW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A G+I+
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIV 86
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TVNI+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTCV+ RF F +TIG+DF +KTV ++GKK+KLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR ANG+++
Sbjct: 65 TAGQERFHTITTSYYRGANGIML 87
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 7 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 66
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 67 TAGQERFRTITTAYYRGAMGIML 89
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 73/98 (74%)
Query: 2 SSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
S S+TN+ + YD L K+++IGD GVGK+C++ RF F + +TIGVDF ++
Sbjct: 12 SFSVTNNSTSQESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIR 71
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
T+ +DGK++KLQIWDTAGQERF+TIT SYYR A+G+II
Sbjct: 72 TIELDGKRIKLQIWDTAGQERFKTITTSYYRGAHGLII 109
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
Length = 203
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +D K +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T++++GK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T ++GK VKLQIW
Sbjct: 6 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIW 65
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIII 89
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIW
Sbjct: 28 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 87
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+ +
Sbjct: 88 DTAGQERFRTITSSYYRGAHGICV 111
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 68 AGQERFRTITSSYYRGAHGICV 89
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum
CS3096]
Length = 202
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 65 AGQERFRTITSSYYRGAHGICV 86
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIW
Sbjct: 34 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 93
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+ +
Sbjct: 94 DTAGQERFRTITSSYYRGAHGICV 117
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T ++GK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|170042777|ref|XP_001849089.1| ras-related protein Rab-8A [Culex quinquefasciatus]
gi|167866246|gb|EDS29629.1| ras-related protein Rab-8A [Culex quinquefasciatus]
Length = 209
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
+D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 6 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 75/103 (72%), Gaps = 7/103 (6%)
Query: 3 SSLTNDHP------NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGV 56
S++ N+H N D YD+LFK++LIGD GVGK+C++ RF + + +TIGV
Sbjct: 21 STINNNHSIEDYLVNNMTPD-YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGV 79
Query: 57 DFSMKTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
DF ++T+ ++GK VKLQIWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 80 DFKIRTIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIV 122
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KL+I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|392567789|gb|EIW60964.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 203
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D YD+LFK++LIGD GVGK+C++ RF F + +TIGVDF ++T+ ++GK VKLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTI +YYR A G+I+
Sbjct: 63 DTAGQERFRTIAAAYYRGAQGIIM 86
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
+DF FK++LIGD GVGK+C++ RF + + +TIGVDF +KT+N+DGK +KLQIWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A G+I+
Sbjct: 67 AGQERFRTITSSYYRGAQGIIL 88
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ D+LFK++LIGD GVGK+C++ RF + + TIGVDF +KTV IDGK +KLQIW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A G+I+
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIV 86
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 23 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 82
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 83 AGQERFRTITSSYYRGAHGICV 104
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 69 GQERFRTITSSYYRGAHGIIV 89
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 46 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 105
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 106 GQERFRTITSSYYRGAHGIIV 126
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV++DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVDLDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+ +
Sbjct: 64 TAGQERFRTITSSYYRGAHGICV 86
>gi|347965503|ref|XP_321946.4| AGAP001211-PA [Anopheles gambiae str. PEST]
gi|333470481|gb|EAA01802.5| AGAP001211-PA [Anopheles gambiae str. PEST]
Length = 208
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+++DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV + GK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 12 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 72 AGQERFRTITSSYYRGAHGICV 93
>gi|444726573|gb|ELW67098.1| Ras-related protein Rab-8A [Tupaia chinensis]
Length = 229
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+C++ RF F E TIGVDF +TV ID K VKLQIWDT
Sbjct: 5 YDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 65 AGQERFRTITSAYYRGADGIIM 86
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis
UAMH 10762]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS
4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS
4417]
Length = 207
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR ++G+II
Sbjct: 65 AGQERFRTITSSYYRGSHGIII 86
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 AYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+C++ RF F E TIGVDF +TV ID K VKLQIWDT
Sbjct: 5 YDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 65 AGQERFRTITSAYYRGADGIIM 86
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 9 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 69 AGQERFRTITSSYYRGAHGICV 90
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|449543332|gb|EMD34308.1| hypothetical protein CERSUDRAFT_117186 [Ceriporiopsis
subvermispora B]
Length = 204
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D YD+LFK++LIGD GVGK+C++ RF F + +TIGVDF ++T+ ++GK VKLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTI +YYR A+G+++
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIVV 86
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 67/81 (82%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK VKLQIWDTA
Sbjct: 34 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTA 93
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 94 GQERFRTITSSYYRGAHGIII 114
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DSYD LFK++LIGD GVGK+C++ RF + + +TIGVDF +KT+ I+ K +KLQI
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIII 86
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+DF FK++LIGD GVGK+C++ RF + + +TIGVDF +KT+N+DGK +KLQIWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A G+I+
Sbjct: 66 TAGQERFRTITSSYYRGAQGIIL 88
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 1 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 60
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 61 AGQERFRTITSSYYRGAHGICV 82
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
+D+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDT
Sbjct: 9 FDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 69 AGQERFRTITSSYYRGAHGIII 90
>gi|159461696|gb|ABW96887.1| Rab8 [Danio rerio]
Length = 136
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DSYD LFK++LIGD GVGK+C++ RF + + +TIGVDF +KT+ I+ K +KLQI
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIII 86
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+DSYD LFK++LIGD GVGK+C++ RF + + +TIGVDF +KT+ I+ K +KLQI
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIII 86
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 81
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 82 GQERFRTITSSYYRGAHGIII 102
>gi|124506197|ref|XP_001351696.1| PfRab1a [Plasmodium falciparum 3D7]
gi|6525224|gb|AAF15358.1|AF201953_1 Rab1 protein [Plasmodium falciparum]
gi|23504624|emb|CAD51503.1| PfRab1a [Plasmodium falciparum 3D7]
Length = 207
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L+K++LIGD GVGK+C++ RF F E TIGVDF +T+ +D K VKLQIWDT
Sbjct: 9 YDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+II
Sbjct: 69 AGQERFRTITSAYYRGADGIII 90
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+N++ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC
A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC
A4]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 63
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+ +
Sbjct: 64 AGQERFRTITSSYYRGAHGICV 85
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+DF FK++LIGD GVGK+C++ RF + + +TIGVDF +KT+N+DGK +KLQIWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIL 86
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+N++ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
+D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 60 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 120 AGQERFRTITSSYYRGAHGIIV 141
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFKV+L+GD VGK+C++ RF ++E +TIGVDF +KTV +DGK +K QIWD
Sbjct: 5 EYDYLFKVLLVGDSSVGKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+T+T SYYR A+G+II
Sbjct: 65 TAGQERFKTVTSSYYRGAHGIII 87
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 61 GQERFRTITSSYYRGAHGIIV 81
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum
JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum
JPCM5]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+N++ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK+++IGD VGK+C++ RF +V+ +TIGVDF ++TV ++GK VKLQIW
Sbjct: 3 NEYDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFL K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas
vaginalis G3]
Length = 203
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
+D LFKV+LIGD G GK+C++ RF F + +TIGVDF +KT+N+DGK +K+Q+WDT
Sbjct: 6 FDLLFKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQVWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR +NG+I+
Sbjct: 66 AGQERFRTITASYYRGSNGIIL 87
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIEMDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|4585808|emb|CAB40900.1| putative Rab1A protein [Plasmodium falciparum]
Length = 207
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L+K++LIGD GVGK+C++ RF F E TIGVDF +T+ +D K VKLQIWDT
Sbjct: 9 YDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+II
Sbjct: 69 AGQERFRTITSAYYRGADGIII 90
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+N++ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDTGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|32401324|gb|AAP80834.1| GTP-binding protein [Griffithsia japonica]
Length = 154
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+L+K +LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 4 EYDYLYKNLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+DF FK++LIGD GVGK+C++ RF + + +TIGVDF +KT+N+DGK +KLQIWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIL 86
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 15 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDTA 74
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 75 GQERFRTITSSYYRGAHGIIV 95
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS
6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS
6284]
Length = 210
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KT+ IDGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR ++G+II
Sbjct: 65 AGQERFRTITSSYYRGSHGIII 86
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ ++GKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|1613773|gb|AAB16753.1| Rab1 [Plasmodium falciparum]
Length = 207
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L+K++LIGD GVGK+C++ RF F E TIGVDF +T+ +D K VKLQIWDT
Sbjct: 9 YDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+II
Sbjct: 69 AGQERFRTITSAYYRGADGIII 90
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|344241420|gb|EGV97523.1| Ras-related protein Rab-8A [Cricetulus griseus]
Length = 236
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+ +DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTADYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ Y +LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 69/83 (83%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ++G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIII 86
>gi|217071576|gb|ACJ84148.1| unknown [Medicago truncatula]
Length = 163
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ++G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIII 86
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ ++G+ +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 68 AGQERFRTITSSYYRGAHGIII 89
>gi|158343289|gb|ABW35317.1| Rab1B [Gymnochlora stellata]
Length = 206
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++T+++DGK +KLQIWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADQTYTPNYISTIGVDFKIRTIDLDGKTIKLQIWDT 69
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 70 AGQERFRTITSSYYRGAHGIIV 91
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+N++ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|255636915|gb|ACU18790.1| unknown [Glycine max]
Length = 101
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+I+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIV 86
>gi|131848|sp|P22128.1|RAB8_DISOM RecName: Full=Ras-related protein Rab-8; AltName: Full=ORA2;
Flags: Precursor
gi|213119|gb|AAA49232.1| GTP-binding protein [Discopyge ommata]
Length = 210
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVI 98
TAGQERFRTIT +YYR A G++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIM 85
>gi|402904632|ref|XP_003915146.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Papio anubis]
gi|426387631|ref|XP_004060267.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Gorilla gorilla
gorilla]
Length = 207
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS
421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS
421]
Length = 210
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR ++G+II
Sbjct: 65 AGQERFRTITSSYYRGSHGIII 86
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 3 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 62
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 63 TAGQERFRTITTAYYRGAMGIML 85
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis
domestica]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|403303364|ref|XP_003942298.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS
2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS
2517]
Length = 212
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KT+ +DGK VKLQI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ++G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIII 86
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|312086652|ref|XP_003145161.1| RAB family member [Loa loa]
gi|307759675|gb|EFO18909.1| RAB family member [Loa loa]
Length = 209
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV ++ K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVNDDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 61 GQERFRTITSSYYRGAHGIIV 81
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR ++G+II
Sbjct: 65 AGQERFRTITSSYYRGSHGIII 86
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 61
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 62 TAGQERFRTITTAYYRGAMGIML 84
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 63 GQERFRTITSSYYRGAHGIIV 83
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD LFK++LIGD GVGKTC++ R+ FV +TIG+DF +KT+ ++GKK+KLQIWD
Sbjct: 5 SYDALFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITSSYYRGAMGIML 87
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|70953492|ref|XP_745844.1| Rab1 protein [Plasmodium chabaudi chabaudi]
gi|56526291|emb|CAH76774.1| Rab1 protein, putative [Plasmodium chabaudi chabaudi]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L+K++LIGD GVGK+C++ RF F E TIGVDF +T+ +D K VKLQIWDT
Sbjct: 9 YDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+II
Sbjct: 69 AGQERFRTITSAYYRGADGIII 90
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis
domestica]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDTA
Sbjct: 44 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 103
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 104 GQERFRTITSSYYRGAHGIIV 124
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|159478503|ref|XP_001697342.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274500|gb|EDP00282.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D++D+ FKV+L+GD GVGK+C++ RF SG F E T +TIGVDF +K + +GK+ KL +W
Sbjct: 3 DTHDYTFKVLLVGDSGVGKSCILTRFTSGSFEENTTSTIGVDFKVKYLEAEGKRCKLTVW 62
Query: 76 DTAGQERFRTITQSYYRSANGVI 98
DTAGQERFRT+T SYYR A G+I
Sbjct: 63 DTAGQERFRTLTSSYYRGAQGII 85
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 66 AGQERFRTITSSYYRGAHGIIV 87
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda
melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 69
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 70 GQERFRTITSSYYRGAHGIIV 90
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQ
Sbjct: 53 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQR 112
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 113 WDTAGQERFRTITSSYYRGAHGIIV 137
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 17 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 76
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 77 GQERFRTITSSYYRGAHGIIV 97
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda
melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 67/90 (74%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P + YD+LFK+++IGD GVGK+ ++ RF F + +TIGVDF +KTVNID K
Sbjct: 68 PRFIKMSEYDYLFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKS 127
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
VKLQIWDTAGQERFRTIT SYY+ A G+I+
Sbjct: 128 VKLQIWDTAGQERFRTITSSYYKGAQGIIV 157
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGK+VKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 67/81 (82%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 71 GQERFRTITSSYYRGAHGIIV 91
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV++DGK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR ++G+II
Sbjct: 65 AGQERFRTITSSYYRGSHGIII 86
>gi|83315332|ref|XP_730748.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490566|gb|EAA22313.1| Rab1 protein [Plasmodium yoelii yoelii]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L+K++LIGD GVGK+C++ RF F E TIGVDF +T+ +D K VKLQIWDT
Sbjct: 9 YDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+II
Sbjct: 69 AGQERFRTITSAYYRGADGIII 90
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 61 GQERFRTITSSYYRGAHGIIV 81
>gi|432863260|ref|XP_004070049.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 239
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 69/88 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGK+VKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVIIGEILC 104
TAGQERFRTIT +YYR A G+++ +C
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDIC 91
>gi|387017944|gb|AFJ51090.1| ras-related protein Rab-8A [Crotalus adamanteus]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC + RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 69/88 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGK+VKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVIIGEILC 104
TAGQERFRTIT +YYR A G+++ +C
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDIC 91
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|213515430|ref|NP_001134795.1| ras-related protein Rab-1A [Salmo salar]
gi|209736104|gb|ACI68921.1| Ras-related protein Rab-1A [Salmo salar]
Length = 88
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DG+ +KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESFISTIGVDFKIRTIELDGRTIKLQ 60
Query: 74 IWDTAGQERFRTITQSYYRSANGVI 98
IWDTAGQERFRTIT SYYR A+G+I
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGII 85
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 67/81 (82%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+++DGK +KLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 71 GQERFRTITSSYYRGAHGIIV 91
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 62 GQERFRTITSSYYRGAHGIIV 82
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D YD+LFK++LIGD GVGK+C++ RF F + +TIGVDF ++T+ ++G+ VKLQIW
Sbjct: 3 DGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTI +YYR A+G+I+
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIIM 86
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 61 GQERFRTITSSYYRGAHGIIV 81
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++TV ++GK VKLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK+VKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK+VKLQIWDT
Sbjct: 26 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 85
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 86 AGQERFRTITTAYYRGAMGILL 107
>gi|325180634|emb|CCA15039.1| Rab1 family GTPase putative [Albugo laibachii Nc14]
Length = 202
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+C++ RF F E TIGVDF +TV ID K +KLQIWDT
Sbjct: 5 YDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVRIDKKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 65 AGQERFRTITSAYYRGADGIIM 86
>gi|148678840|gb|EDL10787.1| RAB8A, member RAS oncogene family, isoform CRA_d [Mus musculus]
gi|149036166|gb|EDL90832.1| RAB8A, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 61
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 62 TAGQERFRTITTAYYRGAMGIML 84
>gi|444726779|gb|ELW67299.1| Ras-related protein Rab-19 [Tupaia chinensis]
Length = 217
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 67/86 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LF ++LIGD +G+TCVV F+S + E NTIGVD ++ ++ I+GK+VK+Q+
Sbjct: 11 DENFDYLFNIILIGDSNMGETCVVQHFKSKVYTEAQQNTIGVDLTVCSLEINGKRVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTA QERF TITQSYYRSA+ II
Sbjct: 71 WDTASQERFSTITQSYYRSAHAAIIA 96
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++TV ++GK VKLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 68
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 69 GQERFRTITSSYYRGAHGIII 89
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF +KT+ +D KK+KLQIWD
Sbjct: 4 AYDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 17 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 76
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 77 TAGQERFRTITSSYYRGSHGIII 99
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ ++GK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis
niloticus]
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|330799117|ref|XP_003287594.1| Rab GTPase [Dictyostelium purpureum]
gi|325082380|gb|EGC35863.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 73/100 (73%), Gaps = 8/100 (8%)
Query: 2 SSSL--TNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFS 59
S+SL + HP YD L K+++IGD GVGK+C++ RF F + +TIGVDF
Sbjct: 18 SASLHGSESHPE------YDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFC 71
Query: 60 MKTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
++T+ +DGKK+KLQIWDTAGQERF+TIT SYYR A+G+II
Sbjct: 72 IRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLII 111
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTASFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGK+VKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTMKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|194387238|dbj|BAG59983.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFPEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 75 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 134
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 135 GQERFRTITSSYYRGAHGIII 155
>gi|148678838|gb|EDL10785.1| RAB8A, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149036167|gb|EDL90833.1| RAB8A, member RAS oncogene family, isoform CRA_c [Rattus
norvegicus]
Length = 138
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS
4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS
4309]
Length = 211
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQI
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ++G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIII 86
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQLDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 64 TAGQERFRTITSSYYRGSHGIII 86
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 64 TAGQERFRTITSSYYRGSHGIII 86
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++TV ++GK VKLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein
YP2; AltName: Full=Rab GTPase YPT1; AltName:
Full=Transport GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex
With Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 64 TAGQERFRTITSSYYRGSHGIII 86
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 64 TAGQERFRTITSSYYRGSHGIII 86
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 69 GQERFRTITSSYYRGAHGIIV 89
>gi|159024328|gb|ABW87378.1| small GTP-binding protein Rab4 [Aiptasia pulchella]
Length = 217
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+SYDFLFK ++IG G GK+C++H+F G F + + +TIGV+F K +N+ GK VKLQIW
Sbjct: 3 ESYDFLFKFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIINVGGKSVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR++T+SYYR A G ++
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALL 86
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 64 TAGQERFRTITSSYYRGSHGIII 86
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 68
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 69 GQERFRTITSSYYRGAHGIII 89
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIG+ GVGK+C++ RF + +TIGVDF +KTV +DGK VKLQIWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR ++G+II
Sbjct: 64 TAGQERFRTITSSYYRGSHGIII 86
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV DGK +KLQIWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 64 TAGQERFRTITSSYYRGAHGIII 86
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD VGK+C++ RF +++ +TIGVDF ++T+ +DGK VKLQIWDTA
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTA 64
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 65 GQERFRTITSSYYRGAHGIII 85
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQER RTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERGRTITSSYYRGAHGIIV 86
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 6 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 66 TAGQERFKTITTAYYRGAMGIIL 88
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARPRADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 68/84 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVIIG 100
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIILA 87
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 65 GQERFRTITSSYYRGAHGIIV 85
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|90079487|dbj|BAE89423.1| unnamed protein product [Macaca fascicularis]
Length = 165
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRT+T +YYR A G+++
Sbjct: 64 TAGQERFRTVTTAYYRGAMGIML 86
>gi|291225089|ref|XP_002732535.1| PREDICTED: ras-related protein Rab-4B-like [Saccoglossus
kowalevskii]
Length = 210
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+SYDFLFK ++IG G GK+C++H+F F +++ +TIGV+F K VN+ GK VKLQIW
Sbjct: 3 ESYDFLFKFLVIGSAGTGKSCILHQFIESKFKQESNHTIGVEFGSKVVNVGGKSVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR++T+SYYR A G ++
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALL 86
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFL K++LIGD GVGK+C + RF F TIG+DF ++T+N+DGK+VKLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR+A G+++
Sbjct: 66 TAGQERFRTITTAYYRNAMGILL 88
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T++++GKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFADDAFNSTFISTIGIDFKIRTIDLNGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFL K++LIGD GVGK+C + RF F TIG+DF ++T+N+DGK+VKLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR+A G+++
Sbjct: 66 TAGQERFRTITTAYYRNAMGILL 88
>gi|414587347|tpg|DAA37918.1| TPA: hypothetical protein ZEAMMB73_495042 [Zea mays]
Length = 254
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 69/94 (73%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++TV ++GK VKLQI
Sbjct: 30 EQRFDYLFKLLLIGDSLVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 89
Query: 75 WDTAGQERFRTITQSYYRSANGVIIGEILCFYGT 108
WDT GQERFRTIT SYYR A+G+I+ + L T
Sbjct: 90 WDTTGQERFRTITSSYYRGAHGIIVSKSLSLRNT 123
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLFK++LIGD GVGKT ++HRF F +TIG+DF +KT+ + GK++KLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSIIHRFTEDAFSPTYISTIGIDFKIKTIEVRGKRIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERF TIT SYYR A G+++
Sbjct: 65 AGQERFHTITTSYYRGAMGIVV 86
>gi|126343561|ref|XP_001362312.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis
domestica]
Length = 201
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFKV+LIGD GVGK+C++ RF + + +TIGVDF ++T+ +DGK VKLQIWDT
Sbjct: 5 YDYLFKVLLIGDSGVGKSCLLLRFADDTYSDSYVSTIGVDFKIRTIQLDGKIVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYY A+G+I+
Sbjct: 65 AGQERFRTITSSYYHGAHGIIL 86
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 66/85 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+L K++LIGD GV K+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 6/94 (6%)
Query: 6 TNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNI 65
+ HP YD L K+++IGD GVGK+C++ RF F + +TIGVDF ++T+ +
Sbjct: 24 SESHPE------YDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIEL 77
Query: 66 DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
DGKK+KLQIWDTAGQERF+TIT SYYR A+G+II
Sbjct: 78 DGKKIKLQIWDTAGQERFKTITTSYYRGAHGLII 111
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+VKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YDFL K++LIGD GVGK+C + RF F TIG+DF ++T+N+DGK+VKLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR+A G+++
Sbjct: 66 TAGQERFRTITTAYYRNAMGILL 88
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV +DGK +KLQIWDTA
Sbjct: 10 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 69
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 70 GQERFRTITSSYYRGAHGIII 90
>gi|327276363|ref|XP_003222939.1| PREDICTED: ras-related protein Rab-4B-like [Anolis carolinensis]
Length = 406
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
++YDFLFK ++IG G GK+C++H+F F + + +TIGV+F K VN+ GK VKLQIW
Sbjct: 196 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSKVVNVGGKTVKLQIW 255
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR++T+SYYR A G ++
Sbjct: 256 DTAGQERFRSVTRSYYRGAAGALL 279
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF +KTV +DGKK+KLQIWD
Sbjct: 5 AYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITTSYYRGAMGIML 87
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|440803267|gb|ELR24175.1| RabE family small GTPase, partial [Acanthamoeba castellanii str.
Neff]
Length = 155
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 67/91 (73%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
HP +YD+L K++LIGD GVGK+C++ RF F TIG+DF ++T+ ++GK
Sbjct: 5 HPPAGGKQAYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELEGK 64
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVII 99
++KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 65 RIKLQIWDTAGQERFRTITTAYYRGAMGILL 95
>gi|32492048|gb|AAP85296.1| Rab1a [Babesia bovis]
Length = 214
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+CV+ RF F + TIGVDF +T+ ++G++VKLQIWDT
Sbjct: 9 YDHLFKLVLIGDSGVGKSCVLLRFADDTFTDSYITTIGVDFRFRTIEVEGRRVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+ +II
Sbjct: 69 AGQERFRTITSAYYRGADAIII 90
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName:
Full=GTP-binding protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 68/90 (75%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P T + +YD+L K++LIGD GVGK+C++ RF F TIG+DF ++T+ ++GK+
Sbjct: 4 PATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+VKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|149028911|gb|EDL84252.1| RAB8B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 175
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|449491717|ref|XP_004174631.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Taeniopygia
guttata]
Length = 181
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC + RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+C++ RF F + +TIGVDF +TV ID K VKLQIWDT
Sbjct: 6 YDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDT 65
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 66 AGQERFRTITSAYYRGADGIIM 87
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+ ++ RF ++E +TIGVDF ++TV+ DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|148694184|gb|EDL26131.1| RAB8B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 192
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|26341800|dbj|BAC34562.1| unnamed protein product [Mus musculus]
Length = 191
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|324523422|gb|ADY48248.1| Ras-related protein Rab-30 [Ascaris suum]
Length = 209
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV + K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGEDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++T+++DGK +KLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+ ++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SY R A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYCRGAHGIIV 86
>gi|308497774|ref|XP_003111074.1| CRE-RAB-30 protein [Caenorhabditis remanei]
gi|308242954|gb|EFO86906.1| CRE-RAB-30 protein [Caenorhabditis remanei]
Length = 214
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV + K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|17555898|ref|NP_499328.1| Protein RAB-30 [Caenorhabditis elegans]
gi|3881017|emb|CAA21489.1| Protein RAB-30 [Caenorhabditis elegans]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV + K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|430811069|emb|CCJ31440.1| unnamed protein product [Pneumocystis jirovecii]
gi|430812087|emb|CCJ30486.1| unnamed protein product [Pneumocystis jirovecii]
Length = 114
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK VKLQIWDTA
Sbjct: 14 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELNGKTVKLQIWDTA 73
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+II
Sbjct: 74 GQERFRTITSSYYRGAHGIII 94
>gi|399163167|gb|AFP33159.1| rab-30, partial [Caenorhabditis elegans]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV + K+KLQIW
Sbjct: 1 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 60
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 61 DTAGQERFRSITQSYYRSAHAIVL 84
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|156088917|ref|XP_001611865.1| Rab1a [Babesia bovis]
gi|154799119|gb|EDO08297.1| Rab1a [Babesia bovis]
Length = 213
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+CV+ RF F + TIGVDF +T+ ++G++VKLQIWDT
Sbjct: 9 YDHLFKLVLIGDSGVGKSCVLLRFADDTFTDSYITTIGVDFRFRTIEVEGRRVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+ +II
Sbjct: 69 AGQERFRTITSAYYRGADAIII 90
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|341878951|gb|EGT34886.1| CBN-RAB-30 protein [Caenorhabditis brenneri]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV + K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 45 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 104
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 105 TAGQERFKTITTAYYRGAMGIIL 127
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|268574762|ref|XP_002642360.1| C. briggsae CBR-RAB-30 protein [Caenorhabditis briggsae]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ Y +LFKVVL+G+ GVGKTC+V +F G F TIGVDF +KTV + K+KLQIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 61
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSA+ +++
Sbjct: 62 DTAGQERFRSITQSYYRSAHAIVL 85
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ D K +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 11 NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKV 70
N + YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +D K +
Sbjct: 2 NPGSNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTI 61
Query: 71 KLQIWDTAGQERFRTITQSYYRSANGVII 99
KLQIWDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 KLQIWDTAGQERFRTITSSYYRGAHGIIV 90
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 73 AGQERFRTITTAYYRGAMGILL 94
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|339252040|ref|XP_003371243.1| GTP-binding protein Ypt3 [Trichinella spiralis]
gi|316968547|gb|EFV52812.1| GTP-binding protein Ypt3 [Trichinella spiralis]
Length = 330
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/98 (51%), Positives = 70/98 (71%)
Query: 2 SSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMK 61
S T +H +DD YD+LFKVVLIGD GVGK+ ++ RF +F ++ TIGV+F+ +
Sbjct: 18 SREFTANHIMVTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKTTIGVEFATR 77
Query: 62 TVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
++ +DGK +K QIWDTAGQER+R IT +YYR A G ++
Sbjct: 78 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALL 115
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC + RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|349804657|gb|AEQ17801.1| putative c chain of rab8 [Hymenochirus curtipes]
Length = 124
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 73 AGQERFRTITTAYYRGAMGILL 94
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a;
AltName: Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|359497644|ref|XP_003635596.1| PREDICTED: ras-related protein RIC1-like, partial [Vitis
vinifera]
Length = 126
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 61 GQERFRTITSSYYRGAHGIIV 81
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + +TIGVDF ++TV ++GK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>gi|108711785|gb|ABF99580.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +++ +TIGVDF ++T+ DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +++ +TIGVDF ++T+ DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ ++GKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|348520672|ref|XP_003447851.1| PREDICTED: ras-related protein Rab-15-like [Oreochromis
niloticus]
Length = 211
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 65/81 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YDFLF+++++GD GVGKTC++ RF DF +TIG+DF MKT+ +DG KV++QIWDT
Sbjct: 5 YDFLFRLLMLGDSGVGKTCMLRRFTESDFDTTHISTIGIDFKMKTLEVDGTKVRVQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVI 98
AGQER++TIT+ YYR A G+I
Sbjct: 65 AGQERYQTITKQYYRRAQGII 85
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC + RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|429329505|gb|AFZ81264.1| Ras related Rab1a small GTP-binding protein [Babesia equi]
Length = 200
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 65/83 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK+VL+GD GVGK+C++ RF F + TIGVDF +T+ ++ K+VKLQIWDT
Sbjct: 9 YDYLFKLVLVGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTIKVNDKRVKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVIIG 100
AGQERFRTIT +YYR A+G+++
Sbjct: 69 AGQERFRTITSTYYRGADGIVLA 91
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK+VLIGD GVGK+C++ RF F + TIGVDF +TV ID K +KLQIWDT
Sbjct: 9 YDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIKLQIWDT 68
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+GV++
Sbjct: 69 AGQERFRTITSAYYRGADGVVL 90
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +V+ +TIGVDF ++TV DGK KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+ FK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYWFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|239791411|dbj|BAH72176.1| ACYPI000150 [Acyrthosiphon pisum]
Length = 102
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +D K VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIKLDNKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c;
AltName: Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 73 AGQERFRTITTAYYRGAMGILL 94
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
++ YD+LFK++LIGD GVGK+ ++ RF + +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|410330929|gb|JAA34411.1| RAB4B, member RAS oncogene family [Pan troglodytes]
Length = 221
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 66/91 (72%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
P ++YDFLFK ++IG G GK+C++H+F F + + +TIGV+F + VN+ GK
Sbjct: 4 RPRLLMAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGK 63
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVII 99
VKLQIWDTAGQERFR++T+SYYR A G ++
Sbjct: 64 TVKLQIWDTAGQERFRSVTRSYYRGAAGALL 94
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 65/83 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD+L K++LIGD GVGK+C++ RF F TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 65 TAGQERFRTITTAYYRGAMGILL 87
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|156389663|ref|XP_001635110.1| predicted protein [Nematostella vectensis]
gi|156222200|gb|EDO43047.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 66/84 (78%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
++YDFLFK ++IG G GK+C++H+F G F + + +TIGV+F K VN+ GK VKLQIW
Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIVNVGGKSVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR++T+SYYR A G ++
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALL 86
>gi|89257659|gb|ABD65146.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 235
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 47 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 106
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 107 GQERFRTITSSYYRGAHGIIV 127
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFK++LIGD VGK+C++ RF +++ +TIGVDF ++T+ DGK +KLQIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|357440495|ref|XP_003590525.1| Ras-like protein [Medicago truncatula]
gi|355479573|gb|AES60776.1| Ras-like protein [Medicago truncatula]
Length = 197
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK+
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|158343285|gb|ABW35315.1| Rab1A1 [Gymnochlora stellata]
gi|193875838|gb|ACF24555.1| Ras-related small GTPase Rab 1a [Gymnochlora stellata]
Length = 207
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK+VLIGD GVGK+C++ RF F + +TIGVDF +T+ I+ K VKLQIWDT
Sbjct: 13 YDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYISTIGVDFRFRTLKINKKTVKLQIWDT 72
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+I+
Sbjct: 73 AGQERFRTITSAYYRGADGIIM 94
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|403223777|dbj|BAM41907.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 210
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 9/99 (9%)
Query: 1 MSSSLTNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSM 60
M+SS++ D YD+LFK+VLIGD GVGK+C++ RF F + TIGVDF
Sbjct: 1 MNSSISKD---------YDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRF 51
Query: 61 KTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
+TV ++ K++KLQIWDTAGQERFRTIT +YYR A+G+I+
Sbjct: 52 RTVIVNNKRIKLQIWDTAGQERFRTITSTYYRGADGIIM 90
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 68/88 (77%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
T ++ SYD+L K++LIGD GVGK+C++ RF F TIG+DF ++T+ +DGK++K
Sbjct: 3 TSKNASYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIK 62
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVII 99
LQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 63 LQIWDTAGQERFRTITTAYYRGAMGILL 90
>gi|392349166|ref|XP_003750307.1| PREDICTED: ras-related protein Rab-1A-like [Rattus norvegicus]
Length = 213
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E + IGVDF ++T+ ++GK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADVTYIESYISIIGVDFKIRTIELEGKIIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR ++G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGSHGIIV 89
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD LFK+VLIGD GVGK+C++ RF F E TIGVDF +T+N+D + VKLQIWDT
Sbjct: 10 YDHLFKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDT 69
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A+G+++
Sbjct: 70 AGQERFRTITSAYYRGADGIVL 91
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 67/86 (77%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
+DD YDFLFKVVLIGD GVGK+ ++ RF DF ++ +TIGV+F+ +++ +DGK +K Q
Sbjct: 4 RDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 74 IWDTAGQERFRTITQSYYRSANGVII 99
IWDTAGQER+R IT +YYR A G ++
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALL 89
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|193690904|ref|XP_001951763.1| PREDICTED: ras-related protein Rab-1A-like [Acyrthosiphon pisum]
Length = 208
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T+ +D K VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIKLDNKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++T+ ++GK +KLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYDFLFK++LIGD GVGKT ++ RF F +TIG+DF ++ + IDGKK+KLQIWD
Sbjct: 4 SYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYDFLFK++LIGD GVGKT ++ RF F +TIG+DF ++ + IDGKK+KLQIWD
Sbjct: 4 SYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GK++KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERF+TIT SYY A+G+I+
Sbjct: 62 WDTAGQERFQTITSSYYLGAHGIIV 86
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++T+ ++GK +KLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GK++KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 66/81 (81%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQIWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A+G+I+
Sbjct: 85 GQERFRTITSSYYRGAHGIIV 105
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 69/94 (73%)
Query: 6 TNDHPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNI 65
T P + + +YD+L K++LIGD GVGK+C++ RF F TIG+DF ++T+ +
Sbjct: 3 TPGAPASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIEL 62
Query: 66 DGKKVKLQIWDTAGQERFRTITQSYYRSANGVII 99
+GK++KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 63 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILL 96
>gi|260830581|ref|XP_002610239.1| hypothetical protein BRAFLDRAFT_245828 [Branchiostoma floridae]
gi|229295603|gb|EEN66249.1| hypothetical protein BRAFLDRAFT_245828 [Branchiostoma floridae]
Length = 168
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 65/83 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD L +V+LIGD GVGKTC+++RF DF +TIG+DF +KTV ++GK++++QIWD
Sbjct: 12 QYDMLLRVLLIGDSGVGKTCILYRFVEDDFTMSHISTIGIDFKLKTVEVNGKRIRVQIWD 71
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQER+ TIT+ YYR A GV++
Sbjct: 72 TAGQERYETITKQYYRRAQGVLL 94
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 68/84 (80%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YD+LFKV++IG+ GVGK+C++ RF F + +TIGVDF ++ + +DGK +KLQIW
Sbjct: 4 NDYDYLFKVLIIGNSGVGKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELDGKSIKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT+SYYR +NG+++
Sbjct: 64 DTAGQERFRTITKSYYRGSNGIVV 87
>gi|449665721|ref|XP_002158483.2| PREDICTED: ras-related protein Rab-4B-like [Hydra magnipapillata]
Length = 209
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 65/84 (77%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
++YD+LFK ++IG GVGK+C++H+F F + +TIGV+F K VNI GK VKLQIW
Sbjct: 3 ETYDYLFKYLIIGSAGVGKSCILHQFMENKFKQDAHHTIGVEFGSKIVNIGGKSVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR++T+SYYR A G ++
Sbjct: 63 DTAGQERFRSVTRSYYRGAAGALL 86
>gi|413932609|gb|AFW67160.1| hypothetical protein ZEAMMB73_060765 [Zea mays]
Length = 180
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++TV +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ +D+LFK++LIGD VGK+C + RF +V+ +TIGVDF ++T+ ++GK +KLQIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A+G+II
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIII 86
>gi|374256037|gb|AEZ00880.1| putative small GTP-binding protein, partial [Elaeis guineensis]
Length = 110
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNI-DGKKVKLQIWD 76
+D+LFK++LIGD GVGK+C++ RF G F + +TIGVDF +K++ DGK VKLQIWD
Sbjct: 6 FDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKLQIWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 66 TAGQERFRTITSSYYRGAHGIII 88
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F + IG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEEAFNTTFISPIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T++++ K VKLQIWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A+G+II
Sbjct: 65 TAGQERFRTITSSYYRGAHGIII 87
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF F +TIG+DF +KTV + GKK+KLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITTSYYRGAMGIML 87
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV I+GK++KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 66/85 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD YDFLFKVVLIGD GVGK+ ++ RF +F ++ +TIGV+F+ +T+ +DGK +K QI
Sbjct: 6 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQER+R IT +YYR A G ++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALL 90
>gi|195496108|ref|XP_002095553.1| GE22458 [Drosophila yakuba]
gi|194181654|gb|EDW95265.1| GE22458 [Drosophila yakuba]
Length = 95
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|156378540|ref|XP_001631200.1| predicted protein [Nematostella vectensis]
gi|156218236|gb|EDO39137.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD LFK++LIGD GVGKTC++ RF + +F + +TIG+DF MKT+ +DGK++++Q+WD
Sbjct: 4 SYDHLFKILLIGDSGVGKTCILCRFANDEFNKSHISTIGIDFKMKTLMVDGKRIRIQMWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQER+ TIT YYR A G+I+
Sbjct: 64 TAGQERYETITTQYYRRAQGIIL 86
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYDFLFK++LIGD GVGKT ++ RF F +TIG+DF ++ + IDGKK+KLQIWD
Sbjct: 4 SYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
D D+LFK++LIGD GVGK+C++ RF + + TIGVDF +KTV I+G VKLQIW
Sbjct: 3 DPKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQIW 62
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFRTIT SYYR A G+I+
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIV 86
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 67/86 (77%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
+DD YD+LFKVVLIGD GVGK+ ++ RF +F ++ +TIGV+F+ +++ +DGK +K Q
Sbjct: 132 RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 191
Query: 74 IWDTAGQERFRTITQSYYRSANGVII 99
IWDTAGQER+R IT +YYR A G ++
Sbjct: 192 IWDTAGQERYRAITSAYYRGAVGALL 217
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 67/86 (77%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
+DD YD+LFKVVLIGD GVGK+ ++ RF +F ++ +TIGV+F+ +++ +DGK +K Q
Sbjct: 4 RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 74 IWDTAGQERFRTITQSYYRSANGVII 99
IWDTAGQER+R IT +YYR A G ++
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALL 89
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF F +TIG+DF +KTV + GKK+KLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITTSYYRGAMGIML 87
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV I+GK++KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 66/85 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD YDFLFKVVLIGD GVGK+ ++ RF +F ++ +TIGV+F+ +T+ +DGK +K QI
Sbjct: 6 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQER+R IT +YYR A G ++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALL 90
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIG+ GVGKTCV+ RF F +TIG+DF ++T+ +D KK+KLQIWD
Sbjct: 5 AYDYLFKLLLIGESGVGKTCVLFRFSDDAFNASFISTIGIDFKIRTIELDDKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G++I
Sbjct: 65 TAGQERFRTITTAYYRGAMGIMI 87
>gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573631|gb|EAW53246.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573632|gb|EAW53247.1| hCG1996054, isoform CRA_d [Homo sapiens]
Length = 166
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 68/83 (81%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I+GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F +TIG+DF ++T+ +DGK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTGFISTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF +F +TIG+DF ++TV+I GKK+KLQ+WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD L K++LIGD GVGK+CV+ R+ F TIG+DF +KT++++GK+VKLQIWDT
Sbjct: 1338 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDT 1397
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 1398 AGQERFRTITTAYYRGAMGILM 1419
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD L K++LIGD GVGK+CV+ R+ F TIG+DF +KT++++GK+VKLQIWDT
Sbjct: 1366 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDT 1425
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 1426 AGQERFRTITTAYYRGAMGILM 1447
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV ++ K VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEAKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD L K++LIGD GVGK+CV+ R+ F TIG+DF +KT++++GK+VKLQIWDT
Sbjct: 1338 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDT 1397
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 1398 AGQERFRTITTAYYRGAMGILM 1419
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 64/82 (78%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD L K++LIGD GVGK+CV+ R+ F TIG+DF +KT++++GK+VKLQIWDT
Sbjct: 1363 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQIWDT 1422
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 1423 AGQERFRTITTAYYRGAMGILM 1444
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV ++GK++KLQ+WD
Sbjct: 4 SYDHLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 64 TAGQERFKTITTAYYRGAMGIIL 86
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF F +TIG+DF +KTV + GKK+KLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITTSYYRGAMGIML 87
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
YD LFK++LIGD GVGKTC+++RF F +TIG+DF +KT+ + GKK+KLQIWD
Sbjct: 5 QYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITMSYYRGAMGIML 87
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
Y +LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK +KLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 65/82 (79%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+L K++LIGD GVGK+C++ RF G F TIG+DF ++T+ +DG+++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWDT 71
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT +YYR A G+++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium
parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + + +TIGVDF ++T++++ K VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4
homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 65/83 (78%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
SYD+L K++LIGD GVGK+C++ RF F TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 65 TAGQERFRTITTAYYRGAMGILL 87
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
DD YD+LFKVVLIGD GVGK+ ++ RF +F ++ +TIGV+F+ +++N+DGK +K QI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQI 65
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQER+R IT +YYR A G ++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALL 90
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
Y +LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ ++GK +KLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIV 86
>gi|256084393|ref|XP_002578414.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
Length = 355
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%)
Query: 19 DFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDTA 78
D+L K++LIGD GVGK+C++ RF F E +TIGVDF ++T++++GK VKLQIWDTA
Sbjct: 162 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTA 221
Query: 79 GQERFRTITQSYYRSANGVII 99
GQERFRTIT SYYR A G+II
Sbjct: 222 GQERFRTITSSYYRGAQGIII 242
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF F +TIG+DF +KTV + GKK+KLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF TIT SYYR A G+++
Sbjct: 65 TAGQERFHTITTSYYRGAMGIML 87
>gi|281200877|gb|EFA75091.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Query: 9 HPNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGK 68
HP YD L K+++IGD GVGK+C++ RF F + +TIGVDF ++T+ +DGK
Sbjct: 34 HPE------YDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGK 87
Query: 69 KVKLQIWDTAGQERFRTITQSYYRSANGVII 99
++KLQIWDTAGQERF+TIT SYYR A+G+II
Sbjct: 88 RIKLQIWDTAGQERFKTITTSYYRGAHGLII 118
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV+++GKK+KLQ+WD
Sbjct: 94 AYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWD 153
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERF+TIT +YYR A G+I+
Sbjct: 154 TAGQERFKTITTAYYRGAMGIIL 176
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,713,029,917
Number of Sequences: 23463169
Number of extensions: 61938626
Number of successful extensions: 197763
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14669
Number of HSP's successfully gapped in prelim test: 7330
Number of HSP's that attempted gapping in prelim test: 173417
Number of HSP's gapped (non-prelim): 22291
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)