BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5771
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28IZ3|RAB19_XENTR Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1
Length = 213
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 77/90 (85%)
Query: 11 NTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKV 70
N+ +DD +DFLFK++LIGD VGKTCVVHRF+SG F NTIGVDF+++ +NI+GKKV
Sbjct: 5 NSLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKV 64
Query: 71 KLQIWDTAGQERFRTITQSYYRSANGVIIG 100
K+Q+WDTAGQERFRTITQSYYRSA+G II
Sbjct: 65 KVQVWDTAGQERFRTITQSYYRSAHGAIIA 94
>sp|Q32NQ0|RAB19_XENLA Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1
Length = 213
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 79/89 (88%)
Query: 12 TFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVK 71
+ +DD +DFLFK++LIGD VGKTCVVHRF+SG F++ NTIGVDF+++++NI+GKKVK
Sbjct: 6 SLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVK 65
Query: 72 LQIWDTAGQERFRTITQSYYRSANGVIIG 100
+Q+WDTAGQERFRTITQSYYRSA+G II
Sbjct: 66 VQVWDTAGQERFRTITQSYYRSAHGAIIA 94
>sp|Q53B90|RAB43_RAT Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1
Length = 210
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
QD+ YDFLFK+VL+GD VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQ
Sbjct: 9 QDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQ 68
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
IWDTAGQERFRTITQSYYRSANG I+
Sbjct: 69 IWDTAGQERFRTITQSYYRSANGAILA 95
>sp|Q8CG50|RAB43_MOUSE Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1
Length = 210
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 14 QDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQ 73
QD+ YDFLFK+VL+GD VGKTCVV RF++G F + G+TIGVDF+MKT+ I GK+VKLQ
Sbjct: 9 QDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQ 68
Query: 74 IWDTAGQERFRTITQSYYRSANGVIIG 100
IWDTAGQERFRTITQSYYRSANG I+
Sbjct: 69 IWDTAGQERFRTITQSYYRSANGAILA 95
>sp|Q86YS6|RAB43_HUMAN Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1
Length = 212
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VL+GD VGKTCVV RF++G F E+ G+TIGVDF+MKT+ I GK+VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 76 DTAGQERFRTITQSYYRSANGVIIG 100
DTAGQERFRTITQSYYRSANG I+
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILA 97
>sp|Q3ZC27|RAB19_BOVIN Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1
Length = 217
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG ++E NTIGVDF+++ + IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>sp|A4D1S5|RAB19_HUMAN Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2
Length = 217
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 74/86 (86%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D+++D+LFK++LIGD VGKTCVV F+SG + E NTIGVDF++++++IDGKKVK+Q+
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>sp|P35294|RAB19_MOUSE Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3
Length = 217
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>sp|Q5M7U5|RAB19_RAT Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1
Length = 217
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
D++ D+LFKV+LIGD VGKTCVV F+SG + E NTIGVDF+++++ IDGKKVK+Q+
Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 75 WDTAGQERFRTITQSYYRSANGVIIG 100
WDTAGQERFRTITQSYYRSA+ II
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIA 96
>sp|Q923S9|RAB30_MOUSE Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1
Length = 203
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>sp|Q15771|RAB30_HUMAN Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2
Length = 203
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>sp|Q17QB7|RAB30_BOVIN Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1
Length = 203
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
+ YDFLFK+VLIG+ GVGKTC+V RF G F G TIGVDF +KTV I+G+KVKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVII 99
DTAGQERFR+ITQSYYRSAN +I+
Sbjct: 64 DTAGQERFRSITQSYYRSANALIL 87
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +VE +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>sp|P34140|RAB1B_DICDI Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B
PE=2 SV=2
Length = 206
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+N+DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2
SV=1
Length = 205
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 67/82 (81%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+I+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIV 89
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans
GN=YPT1 PE=3 SV=1
Length = 201
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF ++E +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++TV +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1
SV=3
Length = 205
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1
SV=1
Length = 201
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRT+T SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTVTSSYYRGAHGIIV 86
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+II
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIII 86
>sp|P36862|YPTV3_VOLCA GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1
Length = 203
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 66/83 (79%)
Query: 16 DSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIW 75
DS+D+ FKV+L+GD GVGK+C++ RF SG F E T +TIGVDF +K + DGK+ KL IW
Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIW 63
Query: 76 DTAGQERFRTITQSYYRSANGVI 98
DTAGQERFRT+T SYYR A G+I
Sbjct: 64 DTAGQERFRTLTSSYYRGAQGII 86
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 10 PNTFQDDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKK 69
P T + +YDFL K++LIGD GVGK+C++ RF G F TIG+DF ++T+ ++GK+
Sbjct: 4 PATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKR 63
Query: 70 VKLQIWDTAGQERFRTITQSYYRSANGVII 99
+KLQIWDTAGQERFRTIT +YYR A G+++
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILL 93
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF +++ +TIGVDF ++TV DGK +KLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+I+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ypt-1 PE=3 SV=1
Length = 203
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 15 DDSYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQI 74
+ YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T+ +DGK VKLQI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 75 WDTAGQERFRTITQSYYRSANGVII 99
WDTAGQERFRTIT SYYR A+G+ +
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICV 86
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 18 YDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWDT 77
YD+LFK++LIGD GVGK+C++ RF + E +TIGVDF ++T ++GK VKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 78 AGQERFRTITQSYYRSANGVII 99
AGQERFRTIT SYYR A+G+II
Sbjct: 65 AGQERFRTITSSYYRGAHGIII 86
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+DF FK++LIGD GVGK+C++ RF + + +TIGVDF +KT+N+DGK +KLQIWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT SYYR A G+I+
Sbjct: 66 TAGQERFRTITSSYYRGAQGIIL 88
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++TV +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVI 98
TAGQERFRTIT +YYR A G++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIM 85
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2
SV=2
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1
SV=1
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTC++ RF F +TIG+DF ++T+ +DGKK+KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 17 SYDFLFKVVLIGDCGVGKTCVVHRFRSGDFVEKTGNTIGVDFSMKTVNIDGKKVKLQIWD 76
+YD+LFK++LIGD GVGKTCV+ RF F +TIG+DF ++T+ +DGK++KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
Query: 77 TAGQERFRTITQSYYRSANGVII 99
TAGQERFRTIT +YYR A G+++
Sbjct: 64 TAGQERFRTITTAYYRGAMGIML 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,932,431
Number of Sequences: 539616
Number of extensions: 1493589
Number of successful extensions: 6224
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 4819
Number of HSP's gapped (non-prelim): 1138
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)