Query psy5772
Match_columns 654
No_of_seqs 509 out of 3042
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:37:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xcg_A PDZ-rhogef, RHO guanine 100.0 6.8E-46 2.3E-50 395.9 27.6 271 366-653 2-283 (368)
2 2pz1_A RHO guanine nucleotide 100.0 7.9E-46 2.7E-50 407.4 23.3 254 380-653 110-365 (466)
3 3t06_A PDZ-rhogef, RHO guanine 100.0 7.2E-45 2.5E-49 394.5 27.9 273 363-653 41-325 (418)
4 3p6a_A RHO guanine nucleotide 100.0 4.4E-45 1.5E-49 391.0 23.9 271 364-653 6-289 (377)
5 1txd_A RHO guanine nucleotide 100.0 1.3E-44 4.4E-49 388.2 24.9 269 364-653 3-287 (385)
6 2z0q_A XPLN, RHO guanine nucle 100.0 8.8E-45 3E-49 383.9 21.7 253 375-653 6-258 (346)
7 3odw_A RHO guanine nucleotide 100.0 3.5E-44 1.2E-48 398.2 25.4 274 361-653 156-442 (536)
8 2dfk_A Collybistin II; DH doma 100.0 8.3E-44 2.8E-48 383.1 26.4 255 379-653 32-288 (402)
9 2vrw_B P95VAV, VAV1, proto-onc 100.0 8.8E-43 3E-47 376.4 25.4 263 365-653 3-265 (406)
10 3jv3_A Intersectin-1; SH3 doma 100.0 1.7E-42 6E-47 356.1 17.6 276 244-589 4-282 (283)
11 3mpx_A FYVE, rhogef and PH dom 100.0 6.3E-42 2.1E-46 373.4 18.9 247 384-653 18-273 (434)
12 1foe_A T-lymphoma invasion and 100.0 3.6E-40 1.2E-44 352.6 24.9 256 381-653 5-274 (377)
13 3jzy_A Intersectin 2; C2 domai 100.0 9.6E-43 3.3E-47 388.1 0.0 258 375-654 14-281 (510)
14 3ky9_A Proto-oncogene VAV; cal 100.0 8.5E-40 2.9E-44 368.4 21.4 245 384-653 193-437 (587)
15 1dbh_A Protein (human SOS 1); 100.0 1.2E-39 4.2E-44 345.6 16.0 241 389-653 4-274 (354)
16 1kz7_A Guanine nucleotide exch 100.0 3.7E-37 1.3E-41 325.8 24.0 242 380-653 3-252 (353)
17 1by1_A Protein (PIX); RHO-GTPa 100.0 5.2E-37 1.8E-41 300.3 14.8 189 385-581 10-199 (209)
18 2rgn_B RHOA/RAC/CDC42 exchange 100.0 4.3E-36 1.5E-40 317.7 22.4 233 384-653 8-243 (354)
19 1nty_A Triple functional domai 100.0 2E-35 6.9E-40 307.3 19.8 227 384-653 5-236 (311)
20 3ksy_A SOS-1, SON of sevenless 100.0 4.3E-36 1.5E-40 356.6 9.0 246 385-653 197-471 (1049)
21 2dfk_A Collybistin II; DH doma 100.0 2.8E-32 9.5E-37 293.3 16.2 202 3-223 155-362 (402)
22 1xcg_A PDZ-rhogef, RHO guanine 100.0 8.9E-32 3E-36 286.8 14.7 204 3-224 140-366 (368)
23 2pz1_A RHO guanine nucleotide 100.0 1.8E-31 6.1E-36 293.1 15.7 203 3-224 232-440 (466)
24 3mpx_A FYVE, rhogef and PH dom 100.0 1.5E-31 5.3E-36 291.3 14.7 195 2-224 143-337 (434)
25 2z0q_A XPLN, RHO guanine nucle 100.0 1.7E-31 5.7E-36 282.2 10.7 198 3-223 131-345 (346)
26 3t06_A PDZ-rhogef, RHO guanine 100.0 9.8E-31 3.3E-35 283.5 16.0 205 3-225 182-409 (418)
27 2vrw_B P95VAV, VAV1, proto-onc 100.0 1.2E-30 4.1E-35 281.4 15.3 200 3-225 135-336 (406)
28 3p6a_A RHO guanine nucleotide 100.0 1.9E-30 6.4E-35 277.5 15.1 201 3-224 147-371 (377)
29 1txd_A RHO guanine nucleotide 100.0 1.8E-30 6.1E-35 278.2 14.3 201 3-224 145-369 (385)
30 3odw_A RHO guanine nucleotide 100.0 1.2E-29 4.1E-34 281.6 15.1 201 3-224 300-524 (536)
31 1dbh_A Protein (human SOS 1); 100.0 2.1E-30 7.1E-35 274.6 8.6 194 3-223 123-348 (354)
32 3ky9_A Proto-oncogene VAV; cal 100.0 1.8E-29 6.3E-34 284.2 13.4 201 3-226 307-509 (587)
33 1foe_A T-lymphoma invasion and 100.0 8.6E-29 2.9E-33 264.4 15.6 209 3-223 136-365 (377)
34 1kz7_A Guanine nucleotide exch 99.9 5.4E-28 1.8E-32 255.5 14.2 193 5-224 125-325 (353)
35 2rgn_B RHOA/RAC/CDC42 exchange 99.9 3.1E-27 1.1E-31 249.7 16.4 192 5-225 121-319 (354)
36 3jzy_A Intersectin 2; C2 domai 99.9 4.4E-29 1.5E-33 277.8 0.0 199 2-226 142-364 (510)
37 1nty_A Triple functional domai 99.9 1.5E-26 5.1E-31 240.4 11.7 185 4-223 119-307 (311)
38 3ksy_A SOS-1, SON of sevenless 99.9 1.6E-26 5.4E-31 274.7 3.1 195 2-223 319-545 (1049)
39 2lg1_A A-kinase anchor protein 99.8 3.9E-20 1.3E-24 175.3 0.5 158 45-224 2-172 (185)
40 3jv3_A Intersectin-1; SH3 doma 99.7 3.3E-18 1.1E-22 175.1 4.5 86 3-88 198-283 (283)
41 1by1_A Protein (PIX); RHO-GTPa 99.6 1E-16 3.6E-21 156.1 4.8 78 2-80 123-200 (209)
42 1zc3_B Exocyst complex protein 99.5 6.4E-14 2.2E-18 121.2 8.9 103 103-223 2-106 (113)
43 3qwm_A Iqsec1, IQ motif and SE 99.5 1E-13 3.4E-18 122.0 9.4 110 102-223 6-121 (140)
44 1fho_A UNC-89; pleckstrin homo 99.3 1.3E-12 4.6E-17 113.2 3.3 101 103-223 4-111 (119)
45 2lg1_A A-kinase anchor protein 99.2 2.6E-12 9E-17 121.4 -0.6 93 547-653 2-101 (185)
46 1v61_A RAC/CDC42 guanine nucle 98.8 3.8E-09 1.3E-13 93.0 6.3 80 137-224 45-126 (132)
47 4gou_A EHRGS-rhogef; RGS domai 98.3 1.8E-05 6E-10 75.3 15.9 173 391-575 190-373 (518)
48 1zc3_B Exocyst complex protein 97.7 3E-05 1E-09 66.6 4.3 39 606-654 3-41 (113)
49 1v89_A Hypothetical protein KI 97.5 0.00016 5.6E-09 62.2 7.1 104 108-224 7-112 (118)
50 2d9y_A Pleckstrin homology dom 97.5 0.00033 1.1E-08 60.2 8.6 103 105-224 7-109 (117)
51 3qwm_A Iqsec1, IQ motif and SE 97.4 0.0001 3.6E-09 64.7 4.5 43 604-653 6-48 (140)
52 2dkp_A Pleckstrin homology dom 97.2 0.00077 2.6E-08 58.9 7.5 103 105-224 17-119 (128)
53 2yry_A Pleckstrin homology dom 97.2 0.001 3.5E-08 57.6 8.2 103 104-223 17-119 (122)
54 2i5f_A Pleckstrin; PH domain, 97.2 0.00046 1.6E-08 58.5 5.7 99 107-223 5-108 (109)
55 1upq_A PEPP1; PH domain, phosp 97.1 0.0012 4E-08 57.3 7.3 104 104-224 6-109 (123)
56 1btk_A Bruton'S tyrosine kinas 97.0 0.0018 6E-08 59.9 8.6 104 109-224 3-132 (169)
57 2lul_A Tyrosine-protein kinase 97.0 0.0013 4.5E-08 60.4 7.7 105 108-225 14-122 (164)
58 2dn6_A KIAA0640 protein; PH do 97.0 0.0015 5E-08 55.9 7.4 96 107-223 6-102 (115)
59 1v5u_A SBF1, SET binding facto 97.0 0.0019 6.4E-08 55.4 7.6 98 109-225 8-112 (117)
60 1x05_A Pleckstrin; PH domain, 96.9 0.0012 4.2E-08 57.7 6.5 103 104-224 13-120 (129)
61 1x1g_A Pleckstrin 2; PH domain 96.9 0.0008 2.7E-08 58.9 5.1 104 103-223 12-123 (129)
62 2rsg_A Collagen type IV alpha- 96.9 0.00069 2.4E-08 55.8 4.2 76 136-222 17-92 (94)
63 3rcp_A Pleckstrin homology dom 96.9 0.0017 5.9E-08 54.3 6.7 78 136-223 15-92 (103)
64 1fgy_A GRP1; PH domain, signal 96.9 0.00066 2.3E-08 59.2 4.1 100 109-224 5-120 (127)
65 2cof_A Protein KIAA1914; PH do 96.9 0.0032 1.1E-07 53.2 8.2 79 136-223 22-100 (107)
66 4a6h_A Phosphatidylinositol 4, 96.8 0.0017 5.8E-08 56.3 6.1 104 109-223 6-117 (120)
67 1u5d_A SKAP55, SRC kinase-asso 96.8 0.0012 4E-08 55.6 4.8 101 109-223 3-104 (108)
68 2cod_A Centaurin-delta 1; ARF 96.7 0.0028 9.7E-08 54.2 6.6 93 107-224 6-99 (115)
69 1eaz_A Tandem PH domain contai 96.7 0.0006 2.1E-08 59.3 2.1 101 105-224 10-111 (125)
70 1u5f_A SRC-associated adaptor 96.6 0.0038 1.3E-07 56.1 7.0 105 106-224 14-119 (148)
71 1pls_A Pleckstrin homology dom 96.5 0.0018 6.2E-08 55.2 4.3 96 109-223 5-100 (113)
72 1wgq_A FYVE, rhogef and PH dom 96.5 0.0047 1.6E-07 52.2 6.7 96 109-224 8-103 (109)
73 1fao_A Dual adaptor of phospho 96.5 0.0015 5.2E-08 56.9 3.7 96 109-225 18-113 (126)
74 1x1f_A Signal-transducing adap 96.4 0.0049 1.7E-07 55.5 6.4 95 109-223 18-112 (149)
75 2p0d_A RHO GTPase-activating p 96.4 0.0034 1.2E-07 55.1 5.0 105 108-224 11-124 (129)
76 1unq_A RAC-alpha serine/threon 96.2 0.0027 9.3E-08 55.2 3.6 101 108-223 7-109 (125)
77 1dyn_A Dynamin; signal transdu 96.2 0.014 4.9E-07 49.9 7.8 102 109-222 12-115 (125)
78 2d9v_A Pleckstrin homology dom 96.2 0.028 9.7E-07 49.1 10.2 99 107-223 6-113 (130)
79 1v5p_A Pleckstrin homology dom 96.0 0.011 3.7E-07 51.6 6.5 100 109-224 15-120 (126)
80 2dtc_A RAL guanine nucleotide 96.0 0.01 3.6E-07 51.5 6.1 84 134-224 22-112 (126)
81 1wi1_A Calcium-dependent activ 96.0 0.012 4.2E-07 50.8 6.4 80 136-223 25-109 (126)
82 2w2x_D 1-phosphatidylinositol- 96.0 0.0037 1.3E-07 54.4 3.2 101 109-224 12-119 (124)
83 2d9x_A Oxysterol binding prote 95.9 0.0024 8.2E-08 55.2 1.9 78 136-223 24-103 (120)
84 1wg7_A Dedicator of cytokinesi 95.9 0.0063 2.2E-07 54.7 4.7 105 105-223 14-123 (150)
85 2j59_M RHO-GTPase activating p 95.9 0.0087 3E-07 55.0 5.7 82 134-223 27-110 (168)
86 1v88_A Oxysterol binding prote 95.9 0.0059 2E-07 53.6 4.1 99 108-223 7-123 (130)
87 3cxb_B Pleckstrin homology dom 95.7 0.016 5.5E-07 49.3 6.1 82 135-223 19-100 (112)
88 3aj4_A Pleckstrin homology dom 95.7 0.016 5.4E-07 49.1 6.0 81 136-223 21-110 (112)
89 2q13_A DCC-interacting protein 95.6 0.053 1.8E-06 56.9 11.1 98 108-223 277-374 (385)
90 3pp2_A RHO GTPase-activating p 95.6 0.016 5.5E-07 50.3 5.8 105 109-223 8-122 (124)
91 1u5e_A SRC-associated adaptor 95.5 0.012 4.1E-07 56.4 5.2 103 107-223 104-207 (211)
92 4h8s_A DCC-interacting protein 95.5 0.039 1.3E-06 58.5 9.7 98 108-223 300-397 (407)
93 2y7b_A Actin-binding protein a 95.4 0.0046 1.6E-07 54.4 1.6 111 109-229 5-133 (134)
94 2coc_A FYVE, rhogef and PH dom 95.4 0.018 6.1E-07 49.0 5.1 83 136-225 23-107 (112)
95 1btn_A Beta-spectrin; signal t 95.3 0.022 7.6E-07 47.4 5.7 81 134-221 21-105 (106)
96 2da0_A 130-kDa phosphatidylino 95.3 0.013 4.4E-07 50.0 4.0 91 109-223 10-100 (114)
97 1wjm_A Beta-spectrin III; PH d 95.3 0.01 3.6E-07 51.3 3.5 84 134-224 30-117 (123)
98 2dhk_A TBC1 domain family memb 95.0 0.019 6.7E-07 49.3 4.2 76 136-223 26-103 (119)
99 3a8p_A T-lymphoma invasion and 94.8 0.038 1.3E-06 54.7 6.4 106 107-223 9-123 (263)
100 1fho_A UNC-89; pleckstrin homo 94.7 0.015 5.3E-07 49.9 2.8 36 606-653 5-40 (119)
101 3tfm_A Myosin X; split PH doma 94.7 0.032 1.1E-06 54.0 5.4 79 134-224 77-155 (228)
102 2rlo_A Centaurin-gamma 1; spli 94.4 0.13 4.4E-06 44.6 8.3 36 183-223 88-123 (128)
103 2r09_A Cytohesin-3; autoinhibi 94.2 0.035 1.2E-06 57.4 4.7 100 109-224 213-328 (347)
104 2fjl_A 1-phosphatidylinositol- 94.2 0.06 2.1E-06 47.8 5.4 57 163-223 91-147 (150)
105 3lju_X ARF-GAP with dual PH do 94.1 0.052 1.8E-06 57.0 5.9 100 107-224 267-372 (386)
106 3tca_A Amyloid beta A4 precurs 94.0 0.026 9E-07 56.7 3.2 85 136-223 184-275 (291)
107 1dro_A Beta-spectrin; cytoskel 93.4 0.049 1.7E-06 46.9 3.5 83 134-223 30-118 (122)
108 2kbt_A Chimera of proto-oncoge 92.9 0.02 6.8E-07 51.0 0.1 35 379-413 97-131 (142)
109 2rov_A RHO-associated protein 92.4 0.1 3.5E-06 44.6 4.0 88 136-223 20-114 (117)
110 3hk0_A Growth factor receptor- 91.9 0.22 7.5E-06 48.7 6.2 89 135-223 147-239 (256)
111 1qqg_A IRS-1, insulin receptor 91.2 0.15 5.2E-06 50.3 4.3 96 108-227 9-115 (264)
112 2ys3_A UNC-112-related protein 88.8 0.7 2.4E-05 40.2 6.0 78 141-222 32-110 (137)
113 4gmv_A RAS-associated and plec 87.4 0.47 1.6E-05 47.0 4.6 88 136-223 174-265 (281)
114 3lju_X ARF-GAP with dual PH do 84.9 0.62 2.1E-05 48.7 4.2 97 110-223 147-245 (386)
115 1v5m_A SH2 and PH domain-conta 84.5 0.48 1.6E-05 40.6 2.5 39 180-223 91-129 (136)
116 1v61_A RAC/CDC42 guanine nucle 84.4 0.37 1.3E-05 42.0 1.8 38 606-654 23-60 (132)
117 3a8n_A TIAM-1, T-lymphoma inva 76.8 0.69 2.4E-05 45.7 1.0 83 134-223 37-123 (279)
118 4f7h_A Fermitin family homolog 74.0 5.6 0.00019 35.6 5.9 78 139-220 68-146 (173)
119 4ejn_A RAC-alpha serine/threon 73.9 1.8 6.2E-05 45.9 3.5 104 108-226 5-110 (446)
120 4bbk_A Kindlin-1, fermitin fam 68.2 6.9 0.00023 34.7 5.1 78 139-220 47-125 (165)
121 1jo8_A ABP1P, actin binding pr 61.8 2.3 7.9E-05 30.7 0.8 35 244-283 2-36 (58)
122 2lx7_A GAS-7, growth arrest-sp 59.0 4.5 0.00015 29.7 2.0 35 244-283 5-40 (60)
123 2lj0_A Sorbin and SH3 domain-c 58.2 3.2 0.00011 31.0 1.1 38 241-283 5-42 (65)
124 2fpe_A C-JUN-amino-terminal ki 57.1 3.3 0.00011 30.3 0.9 36 243-283 4-39 (62)
125 2fei_A CD2-associated protein; 54.1 5.9 0.0002 29.4 1.9 34 245-283 4-37 (65)
126 1k4u_S Phagocyte NADPH oxidase 54.0 3.6 0.00012 30.1 0.7 36 243-283 6-41 (62)
127 2d9w_A Docking protein 2; PH d 50.9 9.7 0.00033 32.4 2.9 101 108-224 11-121 (127)
128 1z9q_A Neutrophil cytosol fact 50.7 7.3 0.00025 30.3 2.0 36 243-283 19-54 (79)
129 1awj_A ITK; transferase, regul 50.4 11 0.00036 29.0 3.0 36 243-283 21-56 (77)
130 2gqi_A RAS GTPase-activating p 49.8 8.4 0.00029 29.0 2.3 37 242-283 7-44 (71)
131 1g2b_A Spectrin alpha chain; c 49.4 5.3 0.00018 29.2 1.0 37 242-283 21-57 (62)
132 1w1g_A HPDK1, 3-phosphoinositi 49.3 90 0.0031 27.4 9.0 90 105-223 48-138 (151)
133 1zuy_A Myosin-5 isoform; SH3 d 49.0 4.2 0.00014 29.1 0.4 35 244-283 2-37 (58)
134 1hsq_A Phospholipase C-gamma ( 48.9 10 0.00036 28.4 2.7 35 244-283 8-42 (71)
135 2fpf_A C-JUN-amino-terminal ki 48.7 5 0.00017 30.3 0.8 37 242-283 6-42 (71)
136 2i0n_A Class VII unconventiona 48.7 6.4 0.00022 30.5 1.4 38 241-283 9-47 (80)
137 2ew3_A SH3-containing GRB2-lik 48.4 4.9 0.00017 30.2 0.7 36 243-283 4-39 (68)
138 2xmf_A Myosin 1E SH3; motor pr 48.4 4.9 0.00017 29.1 0.7 37 242-283 5-41 (60)
139 2kgt_A Tyrosine-protein kinase 46.6 8.2 0.00028 29.1 1.7 36 242-283 10-45 (72)
140 2dbm_A SH3-containing GRB2-lik 45.5 11 0.00039 28.4 2.4 37 242-283 7-43 (73)
141 2g6f_X RHO guanine nucleotide 45.4 6.2 0.00021 28.4 0.8 36 243-283 5-40 (59)
142 1aww_A ATK, AMGX1, BPK, bruton 44.7 13 0.00043 27.5 2.5 37 242-283 8-44 (67)
143 3tfm_A Myosin X; split PH doma 44.6 17 0.00057 34.6 4.0 34 183-222 194-227 (228)
144 1w70_A Neutrophil cytosol fact 44.6 6.2 0.00021 28.6 0.7 35 244-283 6-40 (60)
145 2eqi_A Phospholipase C, gamma 44.5 11 0.00038 28.0 2.2 36 243-283 8-43 (69)
146 1uti_A GRB2-related adaptor pr 44.5 6.5 0.00022 28.2 0.8 34 245-283 4-37 (58)
147 2ed1_A 130 kDa phosphatidylino 44.2 11 0.00037 28.8 2.1 36 243-283 11-46 (76)
148 1x6b_A RHO guanine exchange fa 43.9 9.5 0.00032 29.4 1.7 37 241-283 16-52 (79)
149 4esr_A Jouberin; AHI-1, AHI1, 43.2 6.6 0.00022 29.3 0.7 38 241-283 5-42 (69)
150 2bz8_A SH3-domain kinase bindi 43.1 6.7 0.00023 28.1 0.7 34 245-283 4-37 (58)
151 1zlm_A Osteoclast stimulating 42.9 6.5 0.00022 28.2 0.6 35 244-283 5-39 (58)
152 1i1j_A Melanoma derived growth 42.8 7.7 0.00026 32.2 1.1 40 233-277 13-52 (108)
153 2nwm_A Vinexin; cell adhesion; 42.7 7.4 0.00025 28.8 0.9 34 245-283 4-37 (65)
154 1gl5_A Tyrosine-protein kinase 42.6 7.9 0.00027 28.7 1.0 35 244-283 4-38 (67)
155 1sem_A SEM-5; SRC-homology 3 ( 42.5 7.4 0.00025 27.8 0.8 34 245-283 5-38 (58)
156 1y0m_A 1-phosphatidylinositol- 42.1 8.8 0.0003 27.8 1.2 35 244-283 5-39 (61)
157 2drm_A Acanthamoeba myosin IB; 42.1 6.8 0.00023 28.0 0.6 35 244-283 5-39 (58)
158 2dl4_A Protein STAC; SH3 domai 41.8 9.2 0.00031 28.5 1.3 37 242-283 7-43 (68)
159 1cka_A C-CRK N-terminal SH3 do 41.5 7.8 0.00027 27.6 0.8 34 245-283 4-37 (57)
160 2ke9_A Caskin-2; SH3 domain, A 41.5 10 0.00034 29.8 1.5 35 244-283 20-55 (83)
161 1zx6_A YPR154WP; SH3 domain, p 41.1 6.6 0.00023 28.1 0.4 34 245-283 5-38 (58)
162 1wi7_A SH3-domain kinase bindi 41.1 9.8 0.00034 28.3 1.4 36 243-283 8-43 (68)
163 1b07_A Protein (proto-oncogene 41.1 8.4 0.00029 28.5 1.0 35 244-283 5-39 (65)
164 1m3w_A H10H24; four-helix bund 41.0 29 0.00099 20.7 3.0 18 439-456 4-21 (32)
165 1s1n_A Nephrocystin 1; beta ba 41.0 9.1 0.00031 28.4 1.2 36 243-283 11-46 (68)
166 2ega_A SH3 and PX domain-conta 40.9 7.8 0.00027 29.0 0.8 37 242-283 8-44 (70)
167 2dnu_A RUH-061, SH3 multiple d 40.9 11 0.00036 28.3 1.6 36 243-283 9-44 (71)
168 3ulr_B SRC substrate cortactin 40.7 11 0.00039 27.5 1.7 36 243-283 10-45 (65)
169 2djq_A SH3 domain containing r 40.4 9.5 0.00032 28.3 1.2 37 242-283 7-43 (68)
170 1uj0_A Signal transducing adap 40.3 7.1 0.00024 28.5 0.4 35 244-283 7-41 (62)
171 1x2p_A Protein arginine N-meth 39.5 9.3 0.00032 28.4 1.0 36 243-283 8-43 (68)
172 2l0a_A STAM-1, signal transduc 39.4 11 0.00038 28.6 1.5 36 243-283 18-53 (72)
173 2dil_A Proline-serine-threonin 39.0 9.7 0.00033 28.4 1.0 37 242-283 8-44 (69)
174 1oot_A Hypothetical 40.4 kDa p 38.8 8.9 0.0003 27.6 0.8 36 243-283 4-41 (60)
175 1x2k_A OSTF1, osteoclast stimu 38.8 8.2 0.00028 28.7 0.6 37 242-283 7-43 (68)
176 2dlp_A KIAA1783 protein; SH3 d 38.4 14 0.00048 28.9 2.0 37 242-283 8-46 (85)
177 2iim_A Proto-oncogene tyrosine 38.3 11 0.00038 27.3 1.3 37 242-283 6-42 (62)
178 2j6f_A CD2-associated protein; 38.1 8 0.00027 28.2 0.4 34 245-283 4-38 (62)
179 1uff_A Intersectin 2; beta bar 37.8 14 0.00049 29.4 2.0 37 242-283 5-43 (93)
180 1tg0_A BBC1 protein, myosin ta 37.8 7.7 0.00026 28.9 0.3 35 244-283 9-43 (68)
181 2o2o_A SH3-domain kinase-bindi 37.7 15 0.0005 29.4 2.0 36 243-283 19-54 (92)
182 2vwf_A Growth factor receptor- 37.7 9.1 0.00031 27.3 0.7 34 245-283 5-38 (58)
183 2j05_A RAS GTPase-activating p 37.6 9.3 0.00032 28.1 0.7 36 243-283 6-42 (65)
184 2dmo_A Neutrophil cytosol fact 37.5 9.5 0.00032 28.4 0.8 35 244-283 9-43 (68)
185 1ugv_A KIAA0621, olygophrenin- 37.4 19 0.00064 27.1 2.5 36 243-283 11-47 (72)
186 3a98_A DOCK2, dedicator of cyt 37.2 6.3 0.00022 36.2 -0.3 36 243-283 18-53 (184)
187 1ujy_A RHO guanine nucleotide 37.0 17 0.0006 27.6 2.3 35 244-283 12-46 (76)
188 3c0c_A Endophilin-A2; endocyto 36.8 10 0.00035 28.7 0.8 38 241-283 12-49 (73)
189 2yup_A Vinexin; sorbin and SH3 36.7 16 0.00054 28.9 2.1 35 244-283 19-53 (90)
190 2ydl_A SH3 domain-containing k 36.4 9 0.00031 28.8 0.5 35 244-283 4-40 (69)
191 2kxc_A Brain-specific angiogen 36.3 18 0.0006 26.7 2.1 36 243-283 7-44 (67)
192 2dm1_A Protein VAV-2; RHO fami 36.0 18 0.00061 27.3 2.2 36 243-283 8-45 (73)
193 2oaw_A Spectrin alpha chain, b 35.9 9.7 0.00033 27.8 0.6 34 245-283 4-37 (65)
194 2ak5_A RHO guanine nucleotide 35.7 12 0.00041 27.3 1.1 35 244-283 8-42 (64)
195 2b86_A Cytoplasmic protein NCK 35.7 9.8 0.00034 28.4 0.6 34 245-283 7-40 (67)
196 1spk_A RSGI RUH-010, riken cDN 35.5 18 0.0006 27.2 2.1 36 243-283 8-45 (72)
197 1u5s_A Cytoplasmic protein NCK 35.3 12 0.00041 28.0 1.1 37 242-283 6-44 (71)
198 2lcs_A NAP1-binding protein 2; 35.2 7.2 0.00024 29.7 -0.3 35 244-283 7-41 (73)
199 2gnc_A SLIT-ROBO RHO GTPase-ac 35.1 6.7 0.00023 28.4 -0.4 35 244-283 8-42 (60)
200 3cqt_A P59-FYN, proto-oncogene 35.1 11 0.00039 29.0 0.9 35 244-283 7-41 (79)
201 1neg_A Spectrin alpha chain, b 35.0 11 0.00038 29.5 0.8 37 242-283 17-53 (83)
202 3hie_A Protein PSL1, exocyst c 34.9 91 0.0031 27.9 6.8 73 137-220 65-144 (171)
203 2eyx_A V-CRK sarcoma virus CT1 34.4 12 0.00042 27.7 0.9 35 244-283 8-44 (67)
204 2x3w_D Syndapin I, protein kin 34.3 16 0.00055 26.2 1.6 35 244-283 5-40 (60)
205 2jt4_A Cytoskeleton assembly c 34.2 12 0.00042 27.9 1.0 36 243-283 7-43 (71)
206 4gou_A EHRGS-rhogef; RGS domai 34.1 1.4E+02 0.0047 28.5 8.2 59 14-72 314-372 (518)
207 2cuc_A SH3 domain containing r 34.0 10 0.00035 28.3 0.5 36 243-283 8-43 (70)
208 2a28_A BZZ1 protein; SH3 domai 33.9 12 0.00041 26.2 0.8 34 245-283 3-37 (54)
209 2ed0_A ABL interactor 2; coile 33.6 17 0.00057 27.9 1.6 36 243-283 18-53 (78)
210 2k9g_A SH3 domain-containing k 33.4 14 0.00048 27.8 1.2 36 243-283 10-47 (73)
211 2ecz_A Sorbin and SH3 domain-c 33.4 12 0.00041 27.9 0.7 35 244-283 9-43 (70)
212 2dl3_A Sorbin and SH3 domain-c 33.3 13 0.00045 27.5 1.0 35 244-283 9-43 (68)
213 2o9s_A Ponsin; SH3 domain, sig 32.5 11 0.00038 27.8 0.4 35 244-283 8-42 (67)
214 1yn8_A NBP2, NAP1-binding prot 32.4 7.5 0.00026 27.9 -0.6 34 245-283 4-37 (59)
215 1x43_A Endophilin B1, SH3 doma 32.2 24 0.00082 27.2 2.4 37 242-283 17-55 (81)
216 1csk_A C-SRC SH3 domain; phosp 32.1 11 0.00038 28.3 0.3 35 244-283 13-48 (71)
217 2k2m_A EPS8-like protein 1; al 31.9 15 0.00052 27.2 1.1 36 243-283 9-44 (68)
218 4glm_A Dynamin-binding protein 31.9 12 0.00041 28.0 0.5 37 242-283 13-49 (72)
219 2d8j_A FYN-related kinase; SH3 31.8 13 0.00043 28.4 0.6 35 244-283 9-43 (77)
220 3rnj_A Brain-specific angiogen 31.7 23 0.00079 26.0 2.1 36 243-283 8-45 (67)
221 1x6g_A Megakaryocyte-associate 31.7 15 0.0005 28.5 1.0 37 242-283 17-54 (81)
222 1x2q_A Signal transducing adap 31.4 22 0.00074 28.0 2.0 36 243-283 18-53 (88)
223 3ngp_A Spectrin alpha chain, b 31.3 14 0.00048 26.6 0.8 36 243-283 7-42 (62)
224 2jte_A CD2-associated protein; 30.9 15 0.00052 26.7 0.9 35 244-283 8-44 (64)
225 1uhc_A KIAA1010 protein; beta 30.8 25 0.00086 26.9 2.3 31 243-278 14-44 (79)
226 2yuo_A CIP85, RUN and TBC1 dom 30.7 15 0.00051 28.1 0.9 36 243-283 8-43 (78)
227 2rqv_A BUD emergence protein 1 30.7 21 0.00071 29.6 1.9 34 245-283 8-41 (108)
228 1x69_A Cortactin isoform A; SH 30.7 26 0.00089 26.8 2.4 36 243-283 18-53 (79)
229 1wxb_A Epidermal growth factor 30.6 17 0.00058 26.9 1.2 35 244-283 9-43 (68)
230 3thk_A Spectrin alpha chain, b 30.5 15 0.0005 27.7 0.8 36 243-283 6-41 (73)
231 3h0h_A Proto-oncogene tyrosine 30.4 16 0.00055 27.4 1.1 36 243-283 16-51 (73)
232 1i07_A Epidermal growth factor 30.4 16 0.00056 26.2 1.0 32 246-283 5-36 (60)
233 2pqh_A Spectrin alpha chain, b 30.4 13 0.00046 28.6 0.6 34 245-283 5-38 (80)
234 1ruw_A Myosin-3 isoform, MYO3; 30.3 14 0.00047 27.5 0.6 35 244-283 4-39 (69)
235 1ue9_A Intersectin 2; beta bar 30.2 12 0.00041 28.8 0.2 35 244-283 9-43 (80)
236 4f14_A Nebulette; SH3 domain, 30.2 13 0.00043 27.1 0.4 35 244-283 8-42 (64)
237 4e6r_A Cytoplasmic protein NCK 30.2 12 0.00041 26.6 0.2 33 246-283 5-37 (58)
238 1gbq_A GRB2; complex (signal t 30.1 22 0.00074 26.9 1.7 36 243-283 10-46 (74)
239 2ct3_A Vinexin; SH3 domian, st 30.1 14 0.00048 27.5 0.6 35 244-283 9-43 (70)
240 1wx6_A Cytoplasmic protein NCK 30.0 24 0.00081 27.9 2.0 36 243-283 18-55 (91)
241 2d8h_A SH3YL1 protein; SH3 dom 29.8 19 0.00065 27.6 1.4 36 243-283 18-55 (80)
242 2yun_A Nostrin; nitric oxide s 29.5 15 0.00051 28.2 0.7 35 244-283 9-43 (79)
243 2v1q_A SLA1, cytoskeleton asse 29.4 15 0.00052 26.2 0.7 34 245-283 5-39 (60)
244 3eg3_A Proto-oncogene tyrosine 29.4 17 0.00059 26.2 1.0 36 243-283 6-42 (63)
245 2ekh_A SH3 and PX domain-conta 29.4 12 0.00042 28.9 0.2 35 244-283 10-44 (80)
246 1wyx_A CRK-associated substrat 29.1 15 0.0005 27.3 0.6 34 245-283 6-42 (69)
247 2cre_A HEF-like protein; SH3 d 29.0 15 0.00053 27.3 0.7 35 244-283 9-46 (71)
248 2ebp_A SAM and SH3 domain-cont 28.9 18 0.00061 27.3 1.1 35 244-283 11-47 (73)
249 2bzy_A CRK-like protein, CRKL 28.5 13 0.00044 27.6 0.1 33 246-283 5-39 (67)
250 2ysq_A RHO guanine nucleotide 28.4 19 0.00063 27.8 1.1 36 243-283 11-46 (81)
251 1uhf_A Intersectin 2; beta bar 28.3 15 0.00052 27.3 0.6 35 243-283 9-43 (69)
252 1zuu_A BZZ1 protein; SH3 domai 28.2 17 0.00058 25.8 0.8 34 245-283 4-38 (58)
253 2rf0_A Mitogen-activated prote 28.1 18 0.00062 28.7 1.0 31 242-277 29-59 (89)
254 1wxt_A Hypothetical protein FL 27.6 16 0.00056 27.0 0.6 35 244-283 9-43 (68)
255 2da9_A SH3-domain kinase bindi 27.5 15 0.00052 27.3 0.4 36 243-283 8-45 (70)
256 2ct4_A CDC42-interacting prote 27.5 22 0.00074 26.4 1.3 37 242-283 7-44 (70)
257 2dl7_A KIAA0769 protein; SH3 d 27.3 17 0.00058 27.3 0.7 35 244-283 10-47 (73)
258 2egc_A SH3 and PX domain-conta 26.7 16 0.00055 27.8 0.4 35 243-283 11-45 (75)
259 3u23_A CD2-associated protein; 26.5 13 0.00046 27.0 -0.1 35 244-283 9-43 (65)
260 4ag1_C Fynomer; hydrolase-de n 26.4 19 0.00064 28.2 0.8 36 243-283 7-42 (84)
261 2dl8_A SLIT-ROBO RHO GTPase-ac 26.3 13 0.00045 27.9 -0.2 35 244-283 11-45 (72)
262 1udl_A Intersectin 2, KIAA1256 25.8 23 0.00079 28.5 1.3 35 244-283 36-70 (98)
263 1wxu_A Peroxisomal biogenesis 25.5 31 0.0011 27.3 2.0 32 243-279 18-49 (93)
264 2jw4_A Cytoplasmic protein NCK 25.3 18 0.00063 27.1 0.5 35 244-283 9-43 (72)
265 2epd_A RHO GTPase-activating p 24.6 11 0.00039 28.7 -0.8 36 243-283 11-46 (76)
266 2jxb_A T-cell surface glycopro 24.5 19 0.00063 28.3 0.4 35 244-283 33-67 (86)
267 1bb9_A Amphiphysin 2; transfer 24.3 31 0.0011 28.8 1.9 36 243-283 45-85 (115)
268 1gcq_C VAV proto-oncogene; SH3 24.2 25 0.00085 26.1 1.1 30 249-283 17-47 (70)
269 1w1f_A Tyrosine-protein kinase 23.8 16 0.00056 26.6 -0.0 35 243-283 8-42 (65)
270 1wie_A RIM binding protein 2; 23.5 34 0.0012 27.4 1.9 35 244-283 19-60 (96)
271 1x1g_A Pleckstrin 2; PH domain 23.4 97 0.0033 25.6 5.0 35 603-648 10-44 (129)
272 2cub_A Cytoplasmic protein NCK 22.8 19 0.00064 28.4 0.1 35 244-283 19-53 (88)
273 2cud_A SRC-like-adapter; SH3 d 22.2 21 0.00073 27.4 0.4 36 243-283 18-53 (79)
274 1j3t_A Intersectin 2; beta bar 22.2 24 0.00082 26.6 0.7 36 243-283 11-46 (74)
275 2yuq_A Tyrosine-protein kinase 22.0 27 0.00092 27.2 0.9 35 244-283 21-55 (85)
276 2e5k_A Suppressor of T-cell re 21.9 29 0.001 27.6 1.1 37 242-283 16-56 (94)
277 2yt6_A Adult MALE urinary blad 21.9 27 0.00093 28.6 1.0 36 243-283 28-63 (109)
278 2dn6_A KIAA0640 protein; PH do 21.5 62 0.0021 26.1 3.2 35 607-652 4-38 (115)
279 2ege_A Uncharacterized protein 21.4 29 0.001 26.2 1.0 35 244-283 9-51 (75)
280 2dbk_A CRK-like protein; struc 21.4 22 0.00077 27.9 0.3 35 244-283 18-54 (88)
281 1mv3_A MYC box dependent inter 21.1 31 0.0011 32.3 1.3 35 244-283 144-183 (213)
282 2dl5_A KIAA0769 protein; SH3 d 20.8 25 0.00084 26.9 0.5 35 244-283 15-50 (78)
283 2kxd_A 11-MER peptide, SH3 dom 20.7 26 0.00089 26.3 0.5 31 247-283 5-35 (73)
No 1
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=100.00 E-value=6.8e-46 Score=395.94 Aligned_cols=271 Identities=21% Similarity=0.329 Sum_probs=245.5
Q ss_pred ccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHH
Q psy5772 366 LWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCS 445 (654)
Q Consensus 366 ~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h 445 (654)
+|+++ +++++++++++++.||+++|+||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|+++|
T Consensus 2 ~W~~~---v~~~~~~~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~--~l~~~~~l~~~~~~~iF~ni~~i~~~h 76 (368)
T 1xcg_A 2 NWQHT---VGKDVVAGLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQ--RMKKENLMPREELARLFPNLPELIEIH 76 (368)
T ss_dssp CTTTS---SSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHTTSSCHHHHHHHSSSHHHHHHHH
T ss_pred Cchhh---cCHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCCCCHHHHHHHhCCHHHHHHHH
Confidence 68886 5788899999999999999999999999999999999999999 998888999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcccccHHHHHHHhcc----cchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCc
Q psy5772 446 ERLLAALEQCWQDSILLTNICEIVYQHVT----NKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSL 521 (654)
Q Consensus 446 ~~fl~~Le~~~~~~~~~~~i~~if~~~~~----~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l 521 (654)
+.|+.+|+.+...++....||++|+.++. ..++.+|..||.|++.+...++++.+.++.|..|+++++..+.|+++
T Consensus 77 ~~fl~~L~~~~~~~~~~~~ig~~f~~~~~~~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~~~~l 156 (368)
T 1xcg_A 77 NSWCEAMKKLREEGPIIKEISDLMLARFDGPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRL 156 (368)
T ss_dssp HHHHHHHHHHHHTCSSCCCCHHHHHHHHSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHhcCCCcCcHHHHHHHHccchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCCHHHHHHHHHHHhChhhccC
Confidence 99999999999998888899999999863 14799999999999999999999988899999999999999999999
Q ss_pred CchhhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-
Q psy5772 522 SLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVK- 600 (654)
Q Consensus 522 ~L~s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~- 600 (654)
+|.+||++|||||+||+|||++|+|+|+++|+|+..++.|++.++.++..||+.++++|+..++.+++++|++...+..
T Consensus 157 ~L~~~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~vN~~~~~~e~~~~l~~i~~~l~~~~~~~~~ 236 (368)
T 1xcg_A 157 QLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERAS 236 (368)
T ss_dssp CHHHHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHSCS
T ss_pred ChHHHhhhHhhhhhhHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986420000
Q ss_pred ------ccccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 601 ------CLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 601 ------~~~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
-..+..++|+|+++|.|.+.. .+...+ ++|+|||||+||+|
T Consensus 237 ~pl~~~~~~l~~~~R~li~~G~l~~~~--------~~~~~~----~~~~fLF~d~Ll~~ 283 (368)
T 1xcg_A 237 NPLAAEFKSLDLTTRKMIHEGPLTWRI--------SKDKTL----DLHVLLLEDLLVLL 283 (368)
T ss_dssp CTTTGGGGGCCGGGSCEEEEEEEEECC--------SSSCCC----EEEEEEESSEEEEE
T ss_pred cchhhhhhhcccccceEEeecceEeee--------cCCCee----EEEEEcccccHHHh
Confidence 013556899999999998652 112233 89999999999998
No 2
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=100.00 E-value=7.9e-46 Score=407.37 Aligned_cols=254 Identities=20% Similarity=0.365 Sum_probs=230.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-cCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhc
Q psy5772 380 DTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLD-DVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQD 458 (654)
Q Consensus 380 ~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~-~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~ 458 (654)
..+++.+.+|+++++||++||++||++|+.+.++|+. |+. ..++++..++..||+||++|+.+|+.||.+|+.+...
T Consensus 110 ~~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~--~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~Le~~~~~ 187 (466)
T 2pz1_A 110 EAQSSKDQMRTNVINEILSTERDYIKHLRDICEGYVR--QCRKRADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFNR 187 (466)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhCcCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHcc
Confidence 4578899999999999999999999999999999999 885 4678999999999999999999999999999999876
Q ss_pred C-cccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhccH
Q psy5772 459 S-ILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRL 537 (654)
Q Consensus 459 ~-~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY 537 (654)
+ +....||++|+++++ .|++|..||.|++.+...+.++.+ ++.|..|++.++..+.|.+++|.+||++|||||+||
T Consensus 188 ~~~~~~~ig~~fl~~~~--~f~~Y~~Y~~n~~~a~~~l~~~~~-~~~f~~f~~~~~~~~~~~~l~L~~~Li~PvQRi~rY 264 (466)
T 2pz1_A 188 ERPHLSELGACFLEHQA--DFQIYSEYCNNHPNACVELSRLTK-LSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKY 264 (466)
T ss_dssp SCGGGCCCHHHHHHTHH--HHTTHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHhhH--HHHHHHHHHHhhHHHHHHHHHHHh-ccHHHHHHHHHHHhhhhccCCHHHHhhhHHHHhhhH
Confidence 4 456789999999998 779999999999999999999988 789999999998888888999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEEeee
Q psy5772 538 PLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSM 617 (654)
Q Consensus 538 ~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~G~l 617 (654)
+|||++|+|+|+++|+|+..|+.|++.++.++..||+.++++|+..++..++.+|++. ...+++.++|+||++|.+
T Consensus 265 ~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~----~~~~l~~~~r~li~~G~l 340 (466)
T 2pz1_A 265 PLQLAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDW----EGEDLLVRSSELIYSGEL 340 (466)
T ss_dssp HHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBTC----CSSCHHHHCSCEEEEEEE
T ss_pred HHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCcccccccceeEEeeeE
Confidence 9999999999999999999999999999999999999999999999999999999753 345678899999999999
Q ss_pred EEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 618 NFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 618 ~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
+.+.. .+.+.. ++|+|||||+||+|
T Consensus 341 ~~~~~-------~~~~~~----~r~~fLF~d~Ll~~ 365 (466)
T 2pz1_A 341 TRVTQ-------PQAKSQ----QRMFFLFDHQLIYC 365 (466)
T ss_dssp EEECT-------TTCCEE----EEEEEEETTEEEEE
T ss_pred EEEec-------CCCCee----EEEEEEECCEEEEE
Confidence 98851 112223 89999999999998
No 3
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=100.00 E-value=7.2e-45 Score=394.54 Aligned_cols=273 Identities=21% Similarity=0.327 Sum_probs=247.3
Q ss_pred CCcccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHH
Q psy5772 363 NRSLWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVR 442 (654)
Q Consensus 363 ~~~~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~ 442 (654)
....|++. +++++++.++++++|||+||+||++||++||++|+.+.++|+. ||...+++++.++..||+||++|+
T Consensus 41 ~~~~W~~~---v~~~~~~~l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~--~l~~~~~l~~~~~~~iF~ni~~I~ 115 (418)
T 3t06_A 41 DAQNWQHT---VGKDVVAGLTQREIDRQEVINELFVTEASHLRTLRVLDLIFYQ--RMKKENLMPREELARLFPNLPELI 115 (418)
T ss_dssp --CCTTTS---SSSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHTTSSCHHHHHHHSSSHHHHH
T ss_pred Cccchhhh---cCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCCHHHHHHHHccHHHHH
Confidence 45779985 5788899999999999999999999999999999999999999 998889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCcccccHHHHHHHhcccc-----hhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCC
Q psy5772 443 KCSERLLAALEQCWQDSILLTNICEIVYQHVTNK-----SFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPV 517 (654)
Q Consensus 443 ~~h~~fl~~Le~~~~~~~~~~~i~~if~~~~~~~-----~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~ 517 (654)
++|+.||.+|+.+...+.....||++|+++++ . ++.+|..||.|++.+...+.++.+.++.|..|+++++..+.
T Consensus 116 ~~h~~fl~~L~~~~~~~~~~~~ig~ifl~~~~-~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~~ 194 (418)
T 3t06_A 116 EIHNSWCEAMKKLREEGPIIKEISDLMLARFD-GPAREELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQ 194 (418)
T ss_dssp HHHHHHHHHHHHHGGGCSSCCCCHHHHHHHHS-THHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTTSGG
T ss_pred HHHHHHHHHHHHHHhcCCCcCcHHHHHHHhcc-hhhhHHHhhhhHHHhhhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcc
Confidence 99999999999999999888999999999886 3 46999999999999999999999889999999999999999
Q ss_pred CCCcCchhhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy5772 518 CQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLK 597 (654)
Q Consensus 518 ~~~l~L~s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~ 597 (654)
|++++|.+||++|||||+||+|||++|+++|+++|+|+..++.|++.++.++..||+.++++++..++..++.+|++...
T Consensus 195 ~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~L~~A~~~i~~v~~~iN~~~~~~e~~~~l~~i~~~l~~~~~ 274 (418)
T 3t06_A 195 CRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATAL 274 (418)
T ss_dssp GTTCCHHHHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSEECCTT
T ss_pred cccCCHHHHHhhHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred cc-------cccccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 598 EV-------KCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 598 ~~-------~~~~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
+. ....+..++|+||++|.|++.. .+.+.+ ++|+|||||+||+|
T Consensus 275 ~~~~~~~~~~~~~l~~~~r~li~eG~l~~~~--------~~~~~~----~~~~fLF~d~Ll~~ 325 (418)
T 3t06_A 275 ERASNPLAAEFKSLDLTTRKMIHEGPLTWRI--------SKDKTL----DLHVLLLEDLLVLL 325 (418)
T ss_dssp SSCSCTTTTTTSSCCGGGSCEEEEEEEEECC--------BTTBCC----EEEEEEESSEEEEE
T ss_pred cccccccchhhcccccccceeEEeceEEEEe--------CCCCeE----EEEEEecCCEEEEE
Confidence 00 0113445789999999999774 122233 89999999999998
No 4
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=100.00 E-value=4.4e-45 Score=391.01 Aligned_cols=271 Identities=23% Similarity=0.353 Sum_probs=229.5
Q ss_pred CcccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHH
Q psy5772 364 RSLWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRK 443 (654)
Q Consensus 364 ~~~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~ 443 (654)
...|++. ++++++++++++++||+++++||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|++
T Consensus 6 ~~~W~~~---v~~~~~~~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~--~l~~~~~l~~~~~~~iF~ni~~I~~ 80 (377)
T 3p6a_A 6 PPGWEEL---VPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQ--PMAECLFFPLEELQNIFPSLDELIE 80 (377)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHHTSSCHHHHHHHSTTHHHHHH
T ss_pred cchHHHh---cCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhcCCCCHHHHHHHHccHHHHHH
Confidence 4568885 5788899999999999999999999999999999999999999 9988899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC-cccccHHHHHHHhcccc-----hhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCC
Q psy5772 444 CSERLLAALEQCWQDS-ILLTNICEIVYQHVTNK-----SFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPV 517 (654)
Q Consensus 444 ~h~~fl~~Le~~~~~~-~~~~~i~~if~~~~~~~-----~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~ 517 (654)
+|+.||.+|+++..++ .....||++|+++++ . ++++|..||.|++.+..+++++.+.++.|..|+++++..+.
T Consensus 81 ~h~~fl~~L~~~~~~~~~~~~~ig~~fl~~~~-~~~~~~~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~ 159 (377)
T 3p6a_A 81 VHSLFLDRLMKRRQESGYLIEEIGDVLLARFD-GAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAESRPR 159 (377)
T ss_dssp HHHHHHHHHHHHHHHC--CCCCCHHHHHHHHS-HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHhccCCCCCcHHHHHHHHhc-chhhHHHHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCcc
Confidence 9999999999987764 567799999999987 4 56999999999999999999998889999999999999999
Q ss_pred CCCcCchhhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy5772 518 CQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLK 597 (654)
Q Consensus 518 ~~~l~L~s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~ 597 (654)
|.+++|.+||++|||||+||+|||++|+++||+ |+|+..++.|+..++.++..||+.++++|+..++.++++++++...
T Consensus 160 ~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~-~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~l~~iq~~l~~~~~ 238 (377)
T 3p6a_A 160 CRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHL 238 (377)
T ss_dssp GTTCCHHHHTTHHHHHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHH
T ss_pred cCCCCHHHHHHHHHHHhhhHHHHHHHHHhhCCC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 999999999999999999999999999999987 8999999999999999999999999999999999999999986310
Q ss_pred ------ccccc-ccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 598 ------EVKCL-PVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 598 ------~~~~~-~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
....+ .+..++|+||++|.|++.. .+.+.+ ++|+|||||+||+|
T Consensus 239 ~~~~~~~~~~~~~l~~~~r~li~eG~l~~~~--------~~~~~~----~~~~fLF~d~Ll~~ 289 (377)
T 3p6a_A 239 RQSSDPMLSEFKNLDITKKKLVHEGPLTWRV--------TKDKAV----EVHVLLLDDLLLLL 289 (377)
T ss_dssp HHCCCGGGSSSTTCCCTTSCEEEEEEEEEES--------SSSCEE----EEEEEEESSEEEEE
T ss_pred cccccchhhhhcccccccceEEEECCcEEEe--------cCCCeE----EEEEEeeCCEEEEE
Confidence 00011 2333789999999998774 122233 89999999999998
No 5
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=100.00 E-value=1.3e-44 Score=388.18 Aligned_cols=269 Identities=23% Similarity=0.310 Sum_probs=240.4
Q ss_pred CcccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHH
Q psy5772 364 RSLWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRK 443 (654)
Q Consensus 364 ~~~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~ 443 (654)
..+|+++ +++++++++++.+.||++||+||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|++
T Consensus 3 ~~~W~~~---v~~~~~~~l~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~--~l~~~~~l~~~~~~~iF~ni~~I~~ 77 (385)
T 1txd_A 3 PPNWQQL---VSREVLLGLKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQ--RVSREGILSPSELRKIFSNLEDILQ 77 (385)
T ss_dssp CCCHHHH---SCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHHTCSCHHHHHHHHTTHHHHHH
T ss_pred cchhHHH---cCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCCHHHHHHHhcCHHHHHH
Confidence 4579987 5789999999999999999999999999999999999999999 9988889999999999999999999
Q ss_pred HHHHHHHHHHHHHh---cCcccccHHHHHHHhcc----cchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCC
Q psy5772 444 CSERLLAALEQCWQ---DSILLTNICEIVYQHVT----NKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDP 516 (654)
Q Consensus 444 ~h~~fl~~Le~~~~---~~~~~~~i~~if~~~~~----~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~ 516 (654)
+| .||.+|+++.. .+.....||++|+++++ ..++++|..||.|++.|...++++.++++.|.+|+++++..+
T Consensus 78 ~h-~fL~~l~~~~~~~~~~~~~~~ig~~fl~~~~~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~~~ 156 (385)
T 1txd_A 78 LH-IGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDAESNP 156 (385)
T ss_dssp HH-HHHHHHHHHHHTTCTTCCCCCCHHHHHHHHSTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHHHSG
T ss_pred HH-HHHHHHHHHHHHhhcCCCcccHHHHHHHHccchhHHHHHHHHHHHHHchHHHHHHHHHHHhcCHHHHHHHHHHHhCc
Confidence 99 99999999753 35567899999999974 136699999999999999999999888999999999999999
Q ss_pred CCCCcCchhhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy5772 517 VCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSL 596 (654)
Q Consensus 517 ~~~~l~L~s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~ 596 (654)
.|++++|.+||++|||||+||+|||++|+|+|+++ +|+..++.|++.++.++..||+.++++|+..+|..|+++|++..
T Consensus 157 ~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~~-~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~l~~i~~~l~~~~ 235 (385)
T 1txd_A 157 LCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWP-TEREKVKKAADHCRQILNFVNQAVKEAENKQRLEDYQRRLDTSS 235 (385)
T ss_dssp GGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTCCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
T ss_pred cccCCChHHHhhhHHhHhhhHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 99999999999999999999999999999999986 89999999999999999999999999999999999999998532
Q ss_pred cccc--cc-------ccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 597 KEVK--CL-------PVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 597 ~~~~--~~-------~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
.+ .. .+..++|+||++|.+.+.. .+.+.. ++|+|||||+||+|
T Consensus 236 --~~~~~~p~~~~~~~l~~~~R~li~eG~l~~~~--------~~~~~~----~~~~fLF~d~Ll~~ 287 (385)
T 1txd_A 236 --LKLSEYPNVEELRNLDLTKRKMIHEGPLVWKV--------NRDKTI----DLYTLLLEDILVLL 287 (385)
T ss_dssp --C-------CHHHHTCCGGGSCEEEEEEEEEES--------SSSCBC----CEEEEEESSEEEEE
T ss_pred --cccccccchhhhhhcccccceEEEECcEEEEc--------CCCCeE----EEEEEecCCeeEEE
Confidence 11 11 2445789999999998763 122233 89999999999997
No 6
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=100.00 E-value=8.8e-45 Score=383.95 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=215.5
Q ss_pred ChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHH
Q psy5772 375 DSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQ 454 (654)
Q Consensus 375 ~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~ 454 (654)
+.++++++++++.||+++++||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|+++|+.||.+|++
T Consensus 6 d~~~~~~l~~~~~kR~~vi~Eli~TE~~Yv~~L~~l~~~y~~--~l~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~ 83 (346)
T 2z0q_A 6 SGCVNQVLTAKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHD--PMLKLSIMTEQELNQIFGTLDSLIPLHEELLSQLRD 83 (346)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHTTSSCHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred chHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCCCCCHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999999999999999999 998888999999999999999999999999999999
Q ss_pred HHhcCcccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhh
Q psy5772 455 CWQDSILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRV 534 (654)
Q Consensus 455 ~~~~~~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi 534 (654)
+...|.....||++|+++++ .|++|..||.|++.+..+++++. .++.|.+|+++++..+.|++++|.+||++|||||
T Consensus 84 ~~~~~~~~~~ig~~f~~~~~--~~~~Y~~Y~~n~~~a~~~l~~~~-~~~~f~~fl~~~~~~~~~~~l~L~~~L~~PvQRi 160 (346)
T 2z0q_A 84 VRKPDGSTEHVGPILVGWLP--CLSSYDSYCSNQVAAKALLDHKK-QDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRL 160 (346)
T ss_dssp HCCTTSCCSCCHHHHHHHGG--GGGHHHHHHHHHHHHHHHHHHHT-TCHHHHCC-------------CTTTGGGHHHHHH
T ss_pred HhccCCccchHHHHHHHHhh--HHHHHHHHHHCHHHHHHHHHHhh-cCHHHHHHHHHHHhCccCCCCCHHHHHHHHHHHH
Confidence 99988888899999999999 88999999999999999999864 5999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEE
Q psy5772 535 TRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRS 614 (654)
Q Consensus 535 ~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~ 614 (654)
+||+|||++|+|+||++|+|+..++.|++.++.++..||+.+++.|+...+..|+...+ ....+++.++|.|+++
T Consensus 161 ~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~iN~~~~~~e~~~~~~~l~~~~~-----~~~~~l~~~~r~li~~ 235 (346)
T 2z0q_A 161 VKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEE-----GQKDSLIDSSRVLCCH 235 (346)
T ss_dssp HHHHHHHHHHHHTSCTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCST-----TCCCHHHHTCCCEEEE
T ss_pred hhHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----cCCCccccCCeEEEEe
Confidence 99999999999999999999999999999999999999999999998776655543222 2345788899999999
Q ss_pred eeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 615 GSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 615 G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
|.+... + .+ ++|+|||||+||+|
T Consensus 236 G~l~~~----------~--~~----~~~~fLF~d~Ll~~ 258 (346)
T 2z0q_A 236 GELKNN----------R--GV----KLHVFLFQEVLVIT 258 (346)
T ss_dssp EEEEET----------T--SC----EEEEEEESSEEEEE
T ss_pred ceeEEC----------C--Cc----EEEEEECCCcEEEE
Confidence 998742 1 13 88999999999998
No 7
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=100.00 E-value=3.5e-44 Score=398.21 Aligned_cols=274 Identities=22% Similarity=0.345 Sum_probs=228.0
Q ss_pred CCCCcccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHH
Q psy5772 361 HMNRSLWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTA 440 (654)
Q Consensus 361 ~~~~~~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~ 440 (654)
+.....|+++ +++++++.++++++|||+||+|||+||++||++|+.+.++|+. ||...++++..++..||+||++
T Consensus 156 ~~~~~~W~~~---v~~~~~~~l~~~e~kRq~vi~ELi~TE~~YV~~L~~l~~~y~~--pl~~~~~l~~~~~~~IF~nie~ 230 (536)
T 3odw_A 156 PEEPPGWREL---VPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQ--PMAECLFFPLEELQNIFPSLDE 230 (536)
T ss_dssp ----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHTTSSCHHHHHHHSTTHHH
T ss_pred CCCcchhhHh---cCHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCCCCHHHHHHHHhhHHH
Confidence 4457789986 6788999999999999999999999999999999999999999 9988899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc-CcccccHHHHHHHhcccc-----hhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhc
Q psy5772 441 VRKCSERLLAALEQCWQD-SILLTNICEIVYQHVTNK-----SFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELES 514 (654)
Q Consensus 441 I~~~h~~fl~~Le~~~~~-~~~~~~i~~if~~~~~~~-----~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~ 514 (654)
|+++|+.||.+|+++..+ +.....||+||+++++ . ++++|..||.||+.+..++.++.+.++.|..|+++++.
T Consensus 231 I~~~h~~fL~~L~~~~~~~~~~~~~Igdifl~~~~-~~~~~~f~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~fl~~~~~ 309 (536)
T 3odw_A 231 LIEVHSLFLDRLMKRRQESGYLIEEIGDVLLARFD-GAEGSWFQKISSRFCSRQSFALEQLKAKQRKDPRFCAFVQEAES 309 (536)
T ss_dssp HHHHHHHHHHHHHHHHHTC---CCCCHHHHHHHHS-HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHcc-hhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhCHHHHHHHHHHhh
Confidence 999999999999998776 4567899999999987 3 55999999999999999999999889999999999999
Q ss_pred CCCCCCcCchhhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy5772 515 DPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKF 594 (654)
Q Consensus 515 ~~~~~~l~L~s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~ 594 (654)
.+.|.+++|.+||++|||||+||+|||++|+|+|+. |+||..|+.|+..++.++..||+.++++|+..+|.+|+++|++
T Consensus 310 ~~~~~~l~L~s~Li~PvQRi~rY~LLL~~LlK~T~~-~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~kL~~iq~~L~~ 388 (536)
T 3odw_A 310 RPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDL 388 (536)
T ss_dssp SGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
T ss_pred CcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999987 8999999999999999999999999999999999999999986
Q ss_pred ccccc------ccc-ccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 595 SLKEV------KCL-PVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 595 ~~~~~------~~~-~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
..... ..+ .+..++|+||++|.|.+.. .+.+.. ++|+|||||+||+|
T Consensus 389 ~~~~~~~~~~i~~~~~ldl~~R~LI~eG~l~~~~--------~~~k~~----~r~~fLF~D~LL~~ 442 (536)
T 3odw_A 389 SHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRV--------TKDKAV----EVHVLLLDDLLLLL 442 (536)
T ss_dssp TTTTTC---CCTTSSSCCCTTSCEEEEEEEEEES--------CC---C----EEEEEEESSEEEEE
T ss_pred cccccccccchhhhcccccccceeeeecceEEEe--------cCCCee----EEEEEEcCCEEEEE
Confidence 42000 001 1333689999999998874 122333 89999999999998
No 8
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=8.3e-44 Score=383.12 Aligned_cols=255 Identities=18% Similarity=0.331 Sum_probs=232.8
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-cCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHh
Q psy5772 379 LDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLD-DVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQ 457 (654)
Q Consensus 379 ~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~-~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~ 457 (654)
.+.+++++.+|+++++||++||++||++|+.+.++|+. |+. ..+++++.++..||+|+++|+++|+.||.+|+.+..
T Consensus 32 ~~~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~--pl~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~Le~~~~ 109 (402)
T 2dfk_A 32 GRPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLK--QCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYN 109 (402)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCcCCCCHHHHHHHHhcHHHHHHHHHHHHHHHHHHHc
Confidence 45778899999999999999999999999999999999 886 467899999999999999999999999999999987
Q ss_pred cC-cccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhcc
Q psy5772 458 DS-ILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTR 536 (654)
Q Consensus 458 ~~-~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~r 536 (654)
.+ +....||++|+++++ .|.+|..||.|++.+...+.++.+ ++.|..|++.++..+.|.+++|.+||++|||||+|
T Consensus 110 ~~~~~~~~ig~ifl~~~~--~f~~Y~~Y~~n~~~a~~~l~~~~~-~~~f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~r 186 (402)
T 2dfk_A 110 NDDPHLSEIGPCFLEHQD--GFWIYSEYCNNHLDACMELSKLMK-DSRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICK 186 (402)
T ss_dssp SSCGGGCCCHHHHHHTTT--GGGHHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHTTCCSCCHHHHHTHHHHHHHH
T ss_pred cCCCchhhHHHHHHHHHh--hhHHHHHHHHhhHHHHHHHHHHHc-ChHHHHHHHHHHhhhhcccCCHHHHHhHHHHHHHH
Confidence 64 456789999999999 779999999999999999999887 79999999999988888899999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEEee
Q psy5772 537 LPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGS 616 (654)
Q Consensus 537 Y~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~G~ 616 (654)
|+|||++|+++||++|+|+..++.|++.++.++..||+.++++|+..++..++..|++. ...+++.++|+||++|.
T Consensus 187 Y~LLL~~Llk~t~~~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~----~~~~l~~~~r~Li~~G~ 262 (402)
T 2dfk_A 187 YPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDW----EGDDILDRSSELIYTGE 262 (402)
T ss_dssp HHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSBTC----CSSCGGGTCCCEEEEEE
T ss_pred HHHHHHHHHhhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCccccccccceEEece
Confidence 99999999999999999999999999999999999999999999999999999999743 34567889999999999
Q ss_pred eEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 617 MNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 617 l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
|+.+.. .+.+.. ++|+|||||+||+|
T Consensus 263 l~~~~~-------~~~k~~----~r~~fLF~d~Ll~~ 288 (402)
T 2dfk_A 263 MAWIYQ-------PYGRNQ----QRVFFLFDHQMVLC 288 (402)
T ss_dssp EEEESS-------TTCCCE----EEEEEEETTEEEEE
T ss_pred EEEEec-------cCCceE----EEEEEeeCCEEEEE
Confidence 998851 112223 89999999999998
No 9
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=100.00 E-value=8.8e-43 Score=376.38 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=223.5
Q ss_pred cccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHH
Q psy5772 365 SLWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKC 444 (654)
Q Consensus 365 ~~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~ 444 (654)
..|+++..+...+. ....+.+.||+++++||++||++||++|+.+.++|+. || ..+++++++..||+||++|+++
T Consensus 3 ~~~~dl~~~~~~~~-~~~~~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~f~~--~l--~~~l~~~~~~~iF~ni~~i~~~ 77 (406)
T 2vrw_B 3 EIYEDLMRLESVPT-PPKMTEYDKRCCCLREIQQTEEKYTDTLGSIQQHFMK--PL--QRFLKPQDMETIFVNIEELFSV 77 (406)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HH--TTTSCHHHHHHHHTTHHHHHHH
T ss_pred cHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH--HHhCCHHHHHHHhcCHHHHHHH
Confidence 35777766654331 2334567999999999999999999999999999999 99 4689999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCch
Q psy5772 445 SERLLAALEQCWQDSILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLH 524 (654)
Q Consensus 445 h~~fl~~Le~~~~~~~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~ 524 (654)
|+.||.+|+++...| ....||++|+++++ .|++|..||.|++.+..+++++.+.++.|.+|+++++..+.+.+++|.
T Consensus 78 h~~fl~~L~~~~~~~-~~~~ig~~f~~~~~--~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~ 154 (406)
T 2vrw_B 78 HTHFLKELKDALAGP-GATTLYQVFIKYKE--RFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLR 154 (406)
T ss_dssp HHHHHHHHHHHHHSG-GGTTHHHHHHHHTT--GGGHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHHHHHhcCC-CccHHHHHHHHHHH--HHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHhhccccCCcchH
Confidence 999999999998876 35689999999999 789999999999999999999998899999999999988888999999
Q ss_pred hhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc
Q psy5772 525 SFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPV 604 (654)
Q Consensus 525 s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l 604 (654)
+||++|||||+||+|||++|+|+| ++|+|+..|+.|++.++.++..||+.++++|+..++.+|+..|++. ..++
T Consensus 155 ~~Li~PvQRi~rY~LLL~~llk~t-~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~-----~~~l 228 (406)
T 2vrw_B 155 DLLMVPMQRVLKYHLLLQELVKHT-QDATEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENL-----DQSL 228 (406)
T ss_dssp HHTTHHHHHHTTHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEESC-----SSCG
T ss_pred HHhhhHHHHHhhHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Cccc
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999754 2345
Q ss_pred ccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 605 ISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 605 ~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
...+| |+++|.+.+... .+..++ ++|+|||||+||+|
T Consensus 229 ~~~gr-li~~G~l~~~~~-------~~~~~~----~~~~fLF~d~Ll~~ 265 (406)
T 2vrw_B 229 ANYGR-PKIDGELKITSV-------ERRSKT----DRYAFLLDKALLIC 265 (406)
T ss_dssp GGGCS-EEEEEEEEEECS-------SCCSCE----EEEEEEESSEEEEE
T ss_pred cccCc-ccccccEEEEec-------CCCccc----eEEEEecCCEEEEE
Confidence 55555 999999998741 112233 89999999999998
No 10
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=100.00 E-value=1.7e-42 Score=356.14 Aligned_cols=276 Identities=25% Similarity=0.401 Sum_probs=237.0
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchhhccccCCCCCCCCcccCCCCCCCCCCcccCCCCChhhHHH
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWDNLWDSGNSSTPGATSNSDSMSDPGSDLHLRFIDEPLYQFY 323 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~~~~~~~~s~~~s~~~~~~~~~~~~~~~~lyq~y 323 (654)
.+.+..+|.+.+.++++ +..| |++.+.....++||. +...
T Consensus 4 ~~~a~~~~~~~~~~el~----~~~g-d~i~v~~~~~~~w~~------------~~~~----------------------- 43 (283)
T 3jv3_A 4 QVIGMYDYTAQNDDELA----FSKG-QIINVLNKEDPDWWK------------GEVS----------------------- 43 (283)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEECCSTTEEE------------EEET-----------------------
T ss_pred EEEEccccCCCCCCcCC----CCCC-CEEEEEecCCCCEEE------------EEEC-----------------------
Confidence 45667789999999998 7777 788776666666773 1000
Q ss_pred HHHHHHhhhccCCCCCcccccCCCCCCCCcccccCCCCCCCcccccCccccChhhhccCCHHHHHHHHHHHHHHHHHHHH
Q psy5772 324 NACIAELQFNEGSVENGYEEIGSSPMRTSMLEIIAPPHMNRSLWCQLPEVIDSGVLDTLDAGERKLQEAKFELITSEASY 403 (654)
Q Consensus 324 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~p~v~~~~~~~~l~~~~~krq~~i~ELi~TE~~Y 403 (654)
+..|+.|++++......+....|..- +..++.+++.++||+++|+||++||++|
T Consensus 44 ---------------------g~~G~~P~~~v~~~~~~~~~~q~~~~-----~~~~~~l~~~e~kR~~vi~ELi~TE~~Y 97 (283)
T 3jv3_A 44 ---------------------GQVGLFPSNYVKLTTDMDPSQQWCSD-----LHLLDMLTPTERKRQGYIHELIVTEENY 97 (283)
T ss_dssp ---------------------TEEEEEEGGGEEEGGGSCHHHHHCTT-----CTTGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------CCCCcCCCccccccCccccccccccc-----hhhhhhhcHHHHhHHHHHHHHHhhHHHH
Confidence 02345666666554444444456543 3457889999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHh---cCcccccHHHHHHHhcccchhhh
Q psy5772 404 FKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQ---DSILLTNICEIVYQHVTNKSFNI 480 (654)
Q Consensus 404 v~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~---~~~~~~~i~~if~~~~~~~~~~~ 480 (654)
|++|+.+.++|+. ||...++++..++..||+|+++|+.+|+.||.+|+.+.. .+.....||++|+.+++ .|++
T Consensus 98 v~~L~~l~~~y~~--~l~~~~~l~~~~~~~iF~ni~~i~~~~~~fl~~L~~~~~~~~~~~~~~~ig~~f~~~~~--~~~~ 173 (283)
T 3jv3_A 98 VNDLQLVTEIFQK--PLTESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGDILSAQLP--HMQP 173 (283)
T ss_dssp HHHHHHHHHHTTH--HHHTTCSSCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCCHHHHHHHGG--GGTH
T ss_pred HHHHHHHHHHHHh--hccccCCCCHHHHHHHccCHHHHHHHHHHHHHHHHHHHhccccCCchhHHHHHHHHHHh--hchh
Confidence 9999999999999 998889999999999999999999999999999998865 34456789999999999 8899
Q ss_pred HHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhccHHHHHHHHHHhCCCCCcchHHHHH
Q psy5772 481 YIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHT 560 (654)
Q Consensus 481 Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~ 560 (654)
|..||.|++.+...+..+.++++.|..|+++++..+.|++++|.+||++|||||+||+|||++|+|+||++|+|+..++.
T Consensus 174 Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~ 253 (283)
T 3jv3_A 174 YIRFCSCQLNGAALIQQKTDEAPDFKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKH 253 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHTTSCTTSTTHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhhhhHHHhcchHHHHHHHHhcCCCCCccHHHHHH
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 561 TLATLNKIVHECNEEARKMERYYEMLLLS 589 (654)
Q Consensus 561 al~~i~~l~~~~n~~~~~~e~~~~l~~l~ 589 (654)
|++.++.++..||+.++++|+.++|.+|+
T Consensus 254 A~~~i~~v~~~iNe~~r~~e~~~~l~~iQ 282 (283)
T 3jv3_A 254 ALEKAEELCSQVNEGVREKENSDRLEWIQ 282 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGC----
T ss_pred HHHHHHHHHHHHhHHHHHHhHHHHHHHhh
Confidence 99999999999999999999999988876
No 11
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=373.37 Aligned_cols=247 Identities=17% Similarity=0.262 Sum_probs=223.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc---------CCCCChhhhhhhcCCHHHHHHHHHHHHHHHHH
Q psy5772 384 AGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDD---------VNILSKNDRKHLFGNVTAVRKCSERLLAALEQ 454 (654)
Q Consensus 384 ~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~---------~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~ 454 (654)
..+.||+.|++||++||++||++|+.+.++|+. ||.. .++++..++..||+||++|+++|+.||.+|+.
T Consensus 18 e~~~kr~~ii~ELl~TE~~Yv~~L~~l~~~f~~--pl~~~l~~~~~~~~~~l~~~~~~~iF~ni~~I~~~h~~fL~~L~~ 95 (434)
T 3mpx_A 18 GGQSRALVIAQELLSSEKAYVEMLQHLNLDFHG--AVMRALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEE 95 (434)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHHHHHHHTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhcccccccCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 445899999999999999999999999999998 8742 47888899999999999999999999999999
Q ss_pred HHhcCcccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhh
Q psy5772 455 CWQDSILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRV 534 (654)
Q Consensus 455 ~~~~~~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi 534 (654)
+...|.....||++|+++++ .|++|..||.||+.+...+.++.++++.|.+|+++++..+.+.+++|.+||++|||||
T Consensus 96 ~~~~~~~~~~ig~ifl~~~~--~~~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi 173 (434)
T 3mpx_A 96 RLSNWESQQKVADVFLAREQ--GFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQSVQGGSQTAKHRLLRVVQRL 173 (434)
T ss_dssp HHHTTTTCCCCTHHHHTTTT--THHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTC------CHHHHHHHHHHHH
T ss_pred HHHhccCcccHHHHHHHhhH--HHHHHHHHHHhHHHHHHHHHHHHHhChHHHHHHHHHHcCcccCCCCHHHHHhhhHHhh
Confidence 99998888899999999999 8899999999999999999999988999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEE
Q psy5772 535 TRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRS 614 (654)
Q Consensus 535 ~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~ 614 (654)
+||+|||++|+++|+++|+|+..++.|++.++.++..+|+.++++|+..++.+++..|++.+ +++.++|.||++
T Consensus 174 ~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~l~~l~~~i~~~~------~l~~~~r~li~~ 247 (434)
T 3mpx_A 174 FQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQKLVHIEHSVRGQG------DLLQPGREFLKE 247 (434)
T ss_dssp HHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHEETCC------CCCCTTCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc------ccccCCcceEec
Confidence 99999999999999999999999999999999999999999999999999999999998652 788999999999
Q ss_pred eeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 615 GSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 615 G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
|.+.... ++ ..+ ++|+|||||+||+|
T Consensus 248 g~l~~~~--------~~-~~~----~r~~fLF~d~Ll~~ 273 (434)
T 3mpx_A 248 GTLMKVT--------GK-NRR----PRHLFLMNDVLLYT 273 (434)
T ss_dssp CEEEEEE--------TT-EEE----EEEEEEESSEEEEE
T ss_pred ceEEEEe--------CC-Cce----EEEEEEECCEEEEE
Confidence 9998874 11 123 89999999999997
No 12
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=100.00 E-value=3.6e-40 Score=352.56 Aligned_cols=256 Identities=21% Similarity=0.312 Sum_probs=215.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhcCc
Q psy5772 381 TLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQDSI 460 (654)
Q Consensus 381 ~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~~ 460 (654)
.+++ +.||++||+||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|+++|+.||.+|+.+...++
T Consensus 5 ~ls~-~~kr~~vi~Eli~TE~~Yv~~L~~l~~~y~~--pl~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~ 81 (377)
T 1foe_A 5 QLSD-ADKLRKVICELLETERTYVKDLNCLMERYLK--PLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVP 81 (377)
T ss_dssp CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HHHTSSSSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred cCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5664 6799999999999999999999999999999 998888999999999999999999999999999999987654
Q ss_pred c-------------cccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhh
Q psy5772 461 L-------------LTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFL 527 (654)
Q Consensus 461 ~-------------~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~L 527 (654)
. ...||++|+.+++ .|++|..||.||+.+..++.++ ..++.|..|+++++..+ +.+++|.+||
T Consensus 82 ~~~~~~~~~~~~~~~~~ig~~f~~~~~--~f~~Y~~Y~~n~~~a~~~l~~~-~~~~~f~~fl~~~~~~~-~~~l~L~s~L 157 (377)
T 1foe_A 82 DLEKLEKVDQFKKVLFSLGGSFLYYAD--RFKLYSAFCASHTKVPKVLVKA-KTDTAFKAFLDAQNPRQ-QHSSTLESYL 157 (377)
T ss_dssp CGGGCCSGGGGHHHHHHHHHHHHHHTT--GGGGHHHHHHHTTTHHHHHTTT-TTCHHHHHHHHHHCTTC-CGGGSHHHHT
T ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHHHHHH-hcCHHHHHHHHHHhhcc-ccCcCHHHHh
Confidence 2 2479999999999 7899999999999999999886 45999999999987755 6789999999
Q ss_pred cccchhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccccccccccccccc
Q psy5772 528 MLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLL-LSRLIKFSLKEVKCLPVIS 606 (654)
Q Consensus 528 i~PvQRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~-l~~~i~~~~~~~~~~~l~~ 606 (654)
++|||||+||+|||++|+++||++|+|+..++.|++.++.++..||+.++..|+..++.+ +...+.+. .+.....
T Consensus 158 i~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~~~~v~~~iNe~~r~~e~~~~~~~~l~~~~~~~---~~~~~~~- 233 (377)
T 1foe_A 158 IKPIQRVLKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGE---KKEVADL- 233 (377)
T ss_dssp THHHHHHTTHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC---SCSSCCC-
T ss_pred ccchhhhccHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccc-
Confidence 999999999999999999999999999999999999999999999999999998877643 33344433 2333333
Q ss_pred CCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 607 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 607 ~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
+.+.|+++|.++++.+.+. .++..+.+ ++|+|||+|+||+|
T Consensus 234 ~~g~ll~~~~~~~~~~~~~--~~~~~k~~----~~~~fLF~d~lll~ 274 (377)
T 1foe_A 234 SMGDLLLHTSVIWLNPPAS--LGKWKKEP----ELAAFVFKTAVVLV 274 (377)
T ss_dssp CGGGEEEEEEEEESSCCHH--HHTTCSSC----EEEEEEETTEEEEE
T ss_pred CccceeeecceeeccCchh--hccccccc----eEEEEEcCCeEEEE
Confidence 3456888999987642111 11111223 89999999998875
No 13
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=100.00 E-value=9.6e-43 Score=388.07 Aligned_cols=258 Identities=26% Similarity=0.374 Sum_probs=0.0
Q ss_pred ChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHH
Q psy5772 375 DSGVLDTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQ 454 (654)
Q Consensus 375 ~~~~~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~ 454 (654)
.+++++++++.++|||++|+||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|+++|+.||.+|+.
T Consensus 14 ~~~~l~~l~~~e~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~--~l~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~ 91 (510)
T 3jzy_A 14 LYFQGDTMQPIERKRQGYIHELIQTEERYMADLQLVVEVFQK--RMAESGFLTEGEMALIFVNWKELIMSNTKLLKALRV 91 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCCHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999999999999999 998889999999999999999999999999999999
Q ss_pred HHhcC---cccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccc
Q psy5772 455 CWQDS---ILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPM 531 (654)
Q Consensus 455 ~~~~~---~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~Pv 531 (654)
+...+ .....||++|+.+++ .|++|..||.|++.+...++++.++++.|..|+++++..+.|++++|.+||++||
T Consensus 92 ~~~~~~~~~~~~~ig~~f~~~~~--~~~~Y~~Y~~~~~~a~~~l~~~~~~~~~f~~~~~~~~~~~~~~~l~L~~~L~~Pv 169 (510)
T 3jzy_A 92 RKKTGGEKMPVQMIGDILAAELS--HMQAYIRFCSCQLNGAALLQQKTDEDTDFKEFLKKLASDPRCKGMPLSSFLLKPM 169 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhccCCCCchhhHHHHHHHHhH--HHHHHHHHHHhHHHHHHHHHHHHhcCHHHHHHHHHHHhCccccCCCHHHHhChhh
Confidence 87643 345789999999999 7899999999999999999999988999999999999999999999999999999
Q ss_pred hhhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc-------
Q psy5772 532 QRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPV------- 604 (654)
Q Consensus 532 QRi~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l------- 604 (654)
|||+||+|||++|+|+||++|+|+..++.|++.++.++..||+.++++|+..++..|++++++.+ ...++
T Consensus 170 QRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~l~~l~~~l~~~g---~~~~l~~~~~~~ 246 (510)
T 3jzy_A 170 QRITRYPLLIRSILENTPESHADHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQAHVQCEG---LAEQLIFNSLTN 246 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcCcHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC---cccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999987542 11122
Q ss_pred ccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeeccC
Q psy5772 605 ISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVAG 654 (654)
Q Consensus 605 ~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit~ 654 (654)
+.++|+|+++|.+.... +.+ ++|+|||||+||+|.
T Consensus 247 ~~~~r~li~eG~l~~~~-----------~~~----~~~~fLF~d~Ll~~k 281 (510)
T 3jzy_A 247 CLGPRKLLHSGKLYKTK-----------SNK----ELHGFLFNDFLLLTY 281 (510)
T ss_dssp --------------------------------------------------
T ss_pred ccccceeEEeceEEEcC-----------CCc----EEEEEcccceeEEee
Confidence 24789999999998552 123 789999999999983
No 14
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=100.00 E-value=8.5e-40 Score=368.42 Aligned_cols=245 Identities=19% Similarity=0.272 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhcCcccc
Q psy5772 384 AGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQDSILLT 463 (654)
Q Consensus 384 ~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~~~~~ 463 (654)
..++||+++|+||++||++||++|+.+.++|+. || ..++++.++..||+||++|+.+|+.||.+|+.+...+ ...
T Consensus 193 ~~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~--~L--~~~l~~~~~~~iF~ni~~I~~~h~~fL~~L~~~~~~~-~~~ 267 (587)
T 3ky9_A 193 TEYDKRCCCLREIQQTEEKYTDTLGSIQQHFLK--PL--QRFLKPQDIEIIFINIEDLLRVHTHFLKEMKEALGTP-GAA 267 (587)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH--HH--HTTSCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSS-TTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH--HHhCCHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhcc-Ccc
Confidence 346899999999999999999999999999999 99 4589999999999999999999999999999999887 457
Q ss_pred cHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhccHHHHHHH
Q psy5772 464 NICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRLPLLFDA 543 (654)
Q Consensus 464 ~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~lLL~~ 543 (654)
.||++|+++++ .|++|..||.|++.+..+++++.+.++.|..|+++++..+.+++++|.+||++|||||+||+|||++
T Consensus 268 ~ig~if~~~~~--~f~~Y~~Y~~n~~~a~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~ 345 (587)
T 3ky9_A 268 NLYQVFIKYKE--RFLVYGRYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQE 345 (587)
T ss_dssp SHHHHHHHTTT--GGGHHHHHHHHHHHHHHHHHHHHHTCHHHHTTTTHHHHHHHSSSCCHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHH--hcchHHHHHhChHHHHHHHHHHHhcCHHHHHHHHHHHhccccCCCCHHHHHhHHHHHHHHHHHHHHH
Confidence 89999999999 7899999999999999999999988999999999999999899999999999999999999999999
Q ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEEeeeEEEecc
Q psy5772 544 ILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVD 623 (654)
Q Consensus 544 llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~G~l~~~~~~ 623 (654)
|+|+|| +|+|+..++.|++.++.++..||+.++++|+..++..|+++|++. ..++...+| ++++|.+.+...
T Consensus 346 Llk~T~-~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~l~~lq~~i~~~-----~~~l~~~gr-ll~~G~l~~~~~- 417 (587)
T 3ky9_A 346 LVKHTQ-EAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENL-----DQSLAHYGR-PKIDGELKITSV- 417 (587)
T ss_dssp HHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEETC-----CSCGGGGCC-EEEEEEEEEECS-
T ss_pred HHhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----ccchhhcCc-eEEEeeEEEEec-
Confidence 999997 699999999999999999999999999999999999999999865 234556666 899999998741
Q ss_pred ccchhhcccccccccceEEEEecCCeeecc
Q psy5772 624 SKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 624 ~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
.+.+.+ ++|+|||||+||+|
T Consensus 418 ------~~~~~~----~r~~fLF~d~Ll~~ 437 (587)
T 3ky9_A 418 ------ERRSKM----DRYAFLLDKALLIC 437 (587)
T ss_dssp ------SCCSCE----EEEEEEETTEEEEE
T ss_pred ------cCCCcc----eEEEEEECCEEEEE
Confidence 122233 89999999999998
No 15
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=100.00 E-value=1.2e-39 Score=345.62 Aligned_cols=241 Identities=15% Similarity=0.165 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcC-CCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhcC---ccccc
Q psy5772 389 LQEAKFELITSEASYFKSLTVLEKHFIASPLLDDV-NILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQDS---ILLTN 464 (654)
Q Consensus 389 rq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~-~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~---~~~~~ 464 (654)
+++|++||++||++||++|+.+.++|+. ||... +++++.++..||+|+++|+++|+.||.+|+.+...+ .....
T Consensus 4 y~~vi~Eli~TE~~Yv~~L~~l~~~y~~--~l~~~~~~l~~~~~~~iF~ni~~I~~~h~~fl~~L~~~~~~~~~~~~~~~ 81 (354)
T 1dbh_A 4 YYDLVKAFMAEIRQYIRELNLIIKVFRE--PFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPL 81 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTH--HHHHCTTTCCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCCTTSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCcCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhccccCCccch
Confidence 4589999999999999999999999999 99743 579999999999999999999999999999987653 33378
Q ss_pred HHHHHHHhcccc-hhhhHHHhhhcH--HHHHHHHHHHHhcChhHHHHHHHH-hcCCCCCCcCchhhhcccchhhccHHHH
Q psy5772 465 ICEIVYQHVTNK-SFNIYIKYCSNQ--FHIDRTLKSLRETNPKFIEALTEL-ESDPVCQSLSLHSFLMLPMQRVTRLPLL 540 (654)
Q Consensus 465 i~~if~~~~~~~-~~~~Y~~Y~~n~--~~~~~~l~~~~~~~~~f~~~l~~~-~~~~~~~~l~L~s~Li~PvQRi~rY~lL 540 (654)
||++|+++++ . +|++|..||.|+ +.+...++++.+ ++.|..|++++ +..+.|.+++|.+||++|||||+||+||
T Consensus 82 ig~~f~~~~~-~~~f~~Y~~Y~~n~~~~~a~~~l~~~~~-~~~f~~~l~~~~~~~~~~~~~~L~~~Li~PvQRi~rY~LL 159 (354)
T 1dbh_A 82 VGSCFEDLAE-ELAFDPYESYARDILRPGFHDRFLSQLS-KPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFEL 159 (354)
T ss_dssp CHHHHHHHHH-TTTTHHHHHHHHHHTSTTHHHHHHHHHH-STTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhH-HhhhhHHHHHHHhccchHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhchHHHH
Confidence 9999999998 4 699999999999 556799999864 99999999874 4455677899999999999999999999
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHhccccccc
Q psy5772 541 FDAILTRLRPNHSEYETCHTTLATLNKIVHECNE----------------------EARKMERYYEMLLLSRLIKFSLKE 598 (654)
Q Consensus 541 L~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~----------------------~~~~~e~~~~l~~l~~~i~~~~~~ 598 (654)
|++|+|+||. |+|+..|+.|+..++.++..||+ .+++.++..++.++++.|++.+
T Consensus 160 L~~llk~t~~-~~d~~~L~~Al~~~~~v~~~in~~~~~~~~~r~~~e~~~~~~~ne~~r~~e~~~~l~~lq~~i~~~~-- 236 (354)
T 1dbh_A 160 LKQLEEKSED-QEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWE-- 236 (354)
T ss_dssp HHHHHHHCSC-HHHHHHHHHHHHHTHHHHHHHHHHHHSHHHHHHHHHTC-------------CTHHHHHHHTTEESCC--
T ss_pred HHHHHhcCCC-CccHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhhhHHHHHHHHHHHHHhcCCC--
Confidence 9999999975 99999999999999999999887 5556677788999999997642
Q ss_pred ccccccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 599 VKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 599 ~~~~~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
..++..++|.|+++|.+.... .++ ++|+|||||+||+|
T Consensus 237 --~~~l~~~~r~li~eG~l~~~g-----------~~~----~~~~fLF~d~Ll~~ 274 (354)
T 1dbh_A 237 --GKDIGQCCNEFIMEGTLTRVG-----------AKH----ERHIFLFDGLMICC 274 (354)
T ss_dssp --SSCGGGTCCCEEEEEEEEETT-----------CSS----CEEEEEESSEEEEE
T ss_pred --CcccccccceEEEEeeEEEEe-----------cCc----eEEEEEeCCEEEEE
Confidence 336778899999999998761 223 88999999999998
No 16
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=100.00 E-value=3.7e-37 Score=325.75 Aligned_cols=242 Identities=21% Similarity=0.283 Sum_probs=194.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCC---CCCh---hhhhhhcCCHHHHHHHHH-HHHHHH
Q psy5772 380 DTLDAGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVN---ILSK---NDRKHLFGNVTAVRKCSE-RLLAAL 452 (654)
Q Consensus 380 ~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~---~l~~---~~~~~lF~ni~~I~~~h~-~fl~~L 452 (654)
+++++.+.||++|++||++||++||++|+.+.+.|+. ||.... ++++ .++..||+||++|+++|. .||.+|
T Consensus 3 e~~~~~~~kR~~vi~ELl~TE~~Yv~~L~~l~~~y~~--pl~~~~~~~~~p~~~~~~~~~iF~ni~~I~~~h~~~fl~~L 80 (353)
T 1kz7_A 3 EEEESLAILRRHVMNELLDTERAYVEELLCVLEGYAA--EMDNPLMAHLISTGLQNKKNILFGNMEEIYHFHNRIFLREL 80 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTG--GGGCTTTTTTSCHHHHHTHHHHHTTHHHHHHHHHHTHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccccccCCChhhhhhHHHHHhCHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999 987544 5675 478999999999999996 799999
Q ss_pred HHHHhcCcccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccch
Q psy5772 453 EQCWQDSILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQ 532 (654)
Q Consensus 453 e~~~~~~~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQ 532 (654)
+.+...+ ..||++|+++++ .|++|..||.|++.+..+++++.. ++ |++++.... +.+++|.+||++|||
T Consensus 81 e~~~~~~---~~ig~~fl~~~~--~f~~Y~~Y~~n~~~a~~~l~~~~~-~~----f~~~~~~~~-~~~l~L~~~Li~PvQ 149 (353)
T 1kz7_A 81 ESCIDCP---ELVGRCFLERME--EFQIYEKYCQNKPRSESLWRQCSD-CP----FFQECQKKL-DHKLSLDSYLLKPVQ 149 (353)
T ss_dssp HTTTTCG---GGHHHHHHTTTT--GGGHHHHHHHHHHHHHHHHHHHTT-CH----HHHHHHHHH-TCSSCHHHHHTHHHH
T ss_pred HHHhcCH---HHHHHHHHHhhH--HHHHHHHHHhChHHHHHHHHHhhc-ch----HHHHHHHhc-CCCCCHHHHHHHHHH
Confidence 9988653 589999999999 779999999999999999988765 54 444444332 568999999999999
Q ss_pred hhccHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEE
Q psy5772 533 RVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLV 612 (654)
Q Consensus 533 Ri~rY~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li 612 (654)
||+||+|||++|+|+||+ |+|+..++.|++.++.++..||+.+++. .|.+.+ .+ +.+.|+|+
T Consensus 150 Ri~rY~LLL~~llk~t~~-~~d~~~L~~Al~~i~~v~~~iN~~~~~~-----------~i~~~~-----~~-L~~~g~ll 211 (353)
T 1kz7_A 150 RITKYQLLLKEMLKYSKH-CEGAEDLQEALSSILGILKAVNDSMHLI-----------AITGYD-----GN-LGDLGKLL 211 (353)
T ss_dssp HHHHHHHHHHHHHHTCTT-STTHHHHHHHHHHHHHHHHHHHHHHHHT-----------TEESCC-----SC-GGGGCCEE
T ss_pred HHHHHHHHHHHHHhccCC-CccHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHhCCC-----CC-hhHhhhhh
Confidence 999999999999999984 7999999999999999999999987532 343321 12 34556799
Q ss_pred EEeeeEEEeccccchh-hcccccccccceEEEEecCCeeecc
Q psy5772 613 RSGSMNFVNVDSKMTF-ARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 613 ~~G~l~~~~~~~~~~~-~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
++|.+.++.... .+. +.|...+.+..++|+|||||+||+|
T Consensus 212 ~~g~l~~~~~~~-~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~ 252 (353)
T 1kz7_A 212 MQGSFSVWTDHK-KGHTKVKELARFKPMQRHLFLHEKAVLFC 252 (353)
T ss_dssp EEEEEEEEECCC-CC-----CCCSSSCEEEEEEEESSEEEEE
T ss_pred eecceEEEecCc-cccchhhhhhccCcceeEEEEECCEEEEE
Confidence 999998874111 000 0000000112389999999999998
No 17
>1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1
Probab=100.00 E-value=5.2e-37 Score=300.34 Aligned_cols=189 Identities=17% Similarity=0.303 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhcCccccc
Q psy5772 385 GERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQDSILLTN 464 (654)
Q Consensus 385 ~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~~~~~~ 464 (654)
.+.+|+.+++||++||++||++|+.+.++|+. ||...+++++.++..||+|+++|+++|+.|+.+|+.+...|.....
T Consensus 10 ~~~~R~~vi~ELi~TE~~Yv~~L~~l~~~y~~--pl~~~~~l~~~~~~~iF~ni~~i~~~h~~fl~~L~~~~~~~~~~~~ 87 (209)
T 1by1_A 10 NKSYYNVVLQNILETENEYSKELQTVLSTYLR--PLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQR 87 (209)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTTTSSSSSSGGGTTHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccCCCCHHHHHHHHcCHHHHHHHHHHHHHHHHHHHcCCcchhh
Confidence 34689999999999999999999999999999 9988889999999999999999999999999999999999888889
Q ss_pred HHHHHHHhcccchh-hhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhccHHHHHHH
Q psy5772 465 ICEIVYQHVTNKSF-NIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRLPLLFDA 543 (654)
Q Consensus 465 i~~if~~~~~~~~~-~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~lLL~~ 543 (654)
||++|+++++ .| .+|..||.|++.+...++++ ++.|..|++.++. +.+++++|.+||++|||||+||+|||++
T Consensus 88 ig~~f~~~~~--~f~~~Y~~Y~~n~~~a~~~l~~~---~~~f~~fl~~~~~-~~~~~l~L~s~Li~PvQRi~rY~LLL~~ 161 (209)
T 1by1_A 88 VGGCFLNLMP--QMKTLYLTYCANHPSAVNVLTEH---SEELGEFMETKGA-SSPGILVLTTGLSKPFMRLDKYPTLLKE 161 (209)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---TTTHHHHTTTTCC-CSSTTTHHHHHTTSTTTGGGTHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh---CHHHHHHHHHhcC-CCCCcCCHHHHhhHHHHHHhHHHHHHHH
Confidence 9999999999 66 59999999999999999876 6899999998854 4567799999999999999999999999
Q ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 544 ILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMER 581 (654)
Q Consensus 544 llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~ 581 (654)
|+|+||++|+|+..++.|++.++.++..||+.+++.|+
T Consensus 162 Llk~t~~~h~d~~~l~~Al~~i~~v~~~iNe~~r~~e~ 199 (209)
T 1by1_A 162 LERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKEL 199 (209)
T ss_dssp HHHSSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHhhCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887764
No 18
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=317.72 Aligned_cols=233 Identities=15% Similarity=0.302 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCC--ChhhhhhhcCCHHHHHHHHHH-HHHHHHHHHhcCc
Q psy5772 384 AGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDVNIL--SKNDRKHLFGNVTAVRKCSER-LLAALEQCWQDSI 460 (654)
Q Consensus 384 ~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l--~~~~~~~lF~ni~~I~~~h~~-fl~~Le~~~~~~~ 460 (654)
+...||+++++||++||++||++|+.+.++|+. ||....+. ...+...||+|+++|+++|+. ||.+|+.+..++
T Consensus 8 k~~~kR~~vi~ELi~TE~~Yv~~L~~l~~~y~~--~l~~~~~p~~l~~~~~~iF~ni~~I~~~h~~~fl~~L~~~~~~~- 84 (354)
T 2rgn_B 8 KALERSMYVLSELVETEKMYVDDLGQIVEGYMA--TMAAQGVPESLRGRDRIVFGNIQQIYEWHRDYFLQELQRCLKDP- 84 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH--HHHHHCCCSSSGGGHHHHHTTHHHHHHHHHHTHHHHHHHHHSCG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCCchhhhhhHHHHhhCHHHHHHHHHHHHHHHHHHHHcCH-
Confidence 456899999999999999999999999999999 88754321 124679999999999999999 999999998764
Q ss_pred ccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhccHHHH
Q psy5772 461 LLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRLPLL 540 (654)
Q Consensus 461 ~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~lL 540 (654)
..||++|+++++ .|++|..||.|++.+..+++++.+ ..|.++.+. .|.+++|.+||++|||||+||+||
T Consensus 85 --~~ig~~fl~~~~--~f~~Y~~Y~~n~~~a~~~l~~~~~--~~f~~~~~~-----~~~~l~L~s~Li~PvQRi~rY~LL 153 (354)
T 2rgn_B 85 --DWLAQLFIKHER--RLHMYVVYCQNKPKSEHVVSEFGD--SYFEELRQQ-----LGHRLQLNDLLIKPVQRIMKYQLL 153 (354)
T ss_dssp --GGHHHHHHHTTT--TTHHHHHHHHTSHHHHHHHTTTSH--HHHHHHHHH-----HCCSSCHHHHTTHHHHHHTSHHHH
T ss_pred --HHHHHHHHHhHH--HHHHHHHHHhCcHHHHHHHHHHHH--HHHHHHHHh-----cCCCCCHHHHhhhHHHHHhHHHHH
Confidence 579999999999 789999999999999999987542 345554432 356799999999999999999999
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEEeeeEEE
Q psy5772 541 FDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFV 620 (654)
Q Consensus 541 L~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~G~l~~~ 620 (654)
|++|+|+||++|+|+..++.|++.++.++..||+.++. ..|+... ..+...+.|+++|.+.+.
T Consensus 154 L~~llk~t~~~~~d~~~l~~Al~~i~~v~~~in~~~~~-----------~~i~~~~------~~l~~~~~Ll~~g~~~v~ 216 (354)
T 2rgn_B 154 LKDFLKYYNRAGMDTADLEQAVEVMCFVPKRCNDMMTL-----------GRLRGFE------GKLTAQGKLLGQDTFWVT 216 (354)
T ss_dssp HHHHHHHTSSSCSCHHHHHHHHHHHHHHHHHHHHHHHG-----------GGCBSCC------SCSTTSCCEEEEEEEEEE
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHhCCh------hhhhhhccccccceEEEE
Confidence 99999999999999999999999999999999987642 2343221 123467889999999877
Q ss_pred eccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 621 NVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 621 ~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
....+... +.+.+ ++|+|||||+||+|
T Consensus 217 ~~~~~~~~--~~~~~----~r~~fLF~d~Ll~~ 243 (354)
T 2rgn_B 217 EPEAGGLL--SSRGR----ERRVFLFEQIIIFS 243 (354)
T ss_dssp CC---------CCCC----EEEEEEESSEEEEE
T ss_pred cCCcCccc--cCCCc----eEEEEEeCCcEEEE
Confidence 42211001 11233 89999999999998
No 19
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=100.00 E-value=2e-35 Score=307.31 Aligned_cols=227 Identities=19% Similarity=0.289 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcC-CCCCh---hhhhhhcCCHHHHHHHHHH-HHHHHHHHHhc
Q psy5772 384 AGERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDV-NILSK---NDRKHLFGNVTAVRKCSER-LLAALEQCWQD 458 (654)
Q Consensus 384 ~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~-~~l~~---~~~~~lF~ni~~I~~~h~~-fl~~Le~~~~~ 458 (654)
++++||++|++||++||++||++|+.+.++|+. ||... +.+++ .+...||+|+++|+++|+. ||.+|+.+...
T Consensus 5 k~~~kR~~vi~El~~TE~~Yv~~L~~l~~~y~~--~l~~~~~~l~~~~~~~~~~iF~ni~~i~~~h~~~fl~~L~~~~~~ 82 (311)
T 1nty_A 5 KSARRKEFIMAELIQTEKAYVRDLRECMDTYLW--EMTSGVEEIPPGIVNKELIIFGNMQEIYEFHNNIFLKELEKYEQL 82 (311)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHCCSCCCTTTTTCHHHHHTTHHHHHHHHHHTHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhccCCChhhhhhHHHhhcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 456899999999999999999999999999999 88642 34554 4689999999999999996 99999998754
Q ss_pred CcccccHHHHHHHhcccchhhhHHHhhhcHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCCCcCchhhhcccchhhccHH
Q psy5772 459 SILLTNICEIVYQHVTNKSFNIYIKYCSNQFHIDRTLKSLRETNPKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRLP 538 (654)
Q Consensus 459 ~~~~~~i~~if~~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~ 538 (654)
+ ..||++|+++++ .|++|..||.|++.+...+.+.. + .|++.+...+. .+++|.+||++|||||+||+
T Consensus 83 ~---~~ig~~f~~~~~--~~~~Y~~Y~~n~~~a~~~l~~~~--~----~f~~~~~~~~~-~~l~L~~~Li~PvQRi~rY~ 150 (311)
T 1nty_A 83 P---EDVGHCFVTWAD--KFQMYVTYCKNKPDSTQLILEHA--G----SYFDEIQQRHG-LANSISSYLIKPVQRITKYQ 150 (311)
T ss_dssp G---GGTHHHHHHTTT--TTHHHHHHHHHHHHHHHHHHHHT--T----THHHHHHHHHT-CSSCHHHHHTHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHH--HhHHHHHHHhCcHHHHHHHHHHH--H----HHHHHHHHhcc-CCCCHHHHhhhhHHHHHHHH
Confidence 3 589999999999 78999999999999999997542 2 34444444333 36999999999999999999
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccCCceEEEEeeeE
Q psy5772 539 LLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMN 618 (654)
Q Consensus 539 lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~R~Li~~G~l~ 618 (654)
|||++|+|+||++|+| ++.|++.++.++..+|+.++. ..++... ..+...|+|+++|.+.
T Consensus 151 LLL~~llk~t~~~h~~---l~~Al~~~~~v~~~~N~~~~~-----------~~l~~~~------~~l~~~g~li~~~~~~ 210 (311)
T 1nty_A 151 LLLKELLTCCEEGKGE---IKDGLEVMLSVPKRANDAMHL-----------SMLEGFD------ENIESQGELILQESFQ 210 (311)
T ss_dssp HHHHHHHHTSCTTCTT---HHHHHHHHHHHHHHHHHHHHH-----------TTEESCC------SCSGGGCCEEEEEEEE
T ss_pred HHHHHHHHhCCCCcHH---HHHHHHHHHHHHHHHHHHHHH-----------HHHhCCC------CChHhcCCceeeeeEE
Confidence 9999999999999876 788999999999999997652 1233221 1334567899999998
Q ss_pred EEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 619 FVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 619 ~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
++.+.. ..+ +++ ++|+|||||+||+|
T Consensus 211 ~~~~~~---~~~--~~~----~r~~fLF~d~Ll~~ 236 (311)
T 1nty_A 211 VWDPKT---LIR--KGR----ERHLFLFEMSLVFS 236 (311)
T ss_dssp EECSSS---SSC--CEE----EEEEEEESSEEEEE
T ss_pred EEcCcc---ccc--ccc----eeEEEeccCeEEEE
Confidence 874111 111 123 89999999999998
No 20
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=100.00 E-value=4.3e-36 Score=356.64 Aligned_cols=246 Identities=15% Similarity=0.175 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcC-CCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhcC---c
Q psy5772 385 GERKLQEAKFELITSEASYFKSLTVLEKHFIASPLLDDV-NILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQDS---I 460 (654)
Q Consensus 385 ~~~krq~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~-~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~---~ 460 (654)
.+.+|+++|+||++||++||++|+.+.++|+. ||... +++++.++..||+||++|+++|+.||.+|+.+...+ .
T Consensus 197 ~~~~~revI~ELi~TE~~YV~~L~~l~~~y~~--pL~~~~~~l~~~~~~~IF~Ni~~I~~~h~~fL~~Le~~~~~~~~~~ 274 (1049)
T 3ksy_A 197 GEQTYYDLVKAFMAEIRQYIRELNLIIKVFRE--PFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGS 274 (1049)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHTTHH--HHHHCTTTSCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHCCSSS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCccCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 34677899999999999999999999999999 98855 688999999999999999999999999999998854 2
Q ss_pred ccccHHHHHHHhcccchhhhHHHhhhcH--HHHHHHHHHHHhcChhHHHHHHH-HhcCCCCCCcCchhhhcccchhhccH
Q psy5772 461 LLTNICEIVYQHVTNKSFNIYIKYCSNQ--FHIDRTLKSLRETNPKFIEALTE-LESDPVCQSLSLHSFLMLPMQRVTRL 537 (654)
Q Consensus 461 ~~~~i~~if~~~~~~~~~~~Y~~Y~~n~--~~~~~~l~~~~~~~~~f~~~l~~-~~~~~~~~~l~L~s~Li~PvQRi~rY 537 (654)
....||++|+++++...|.+|..||.|| +.+..+++++. .++.|..|+++ ++..+.|.+++|.+||++|||||+||
T Consensus 275 ~~~~IgdiFl~~~~~~~F~~Y~~Yc~ny~~~~a~~~l~~l~-~~~~f~~fl~~~~~~~~~~~~l~L~s~LikPvQRI~rY 353 (1049)
T 3ksy_A 275 PHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQL-SKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHY 353 (1049)
T ss_dssp SSCCCHHHHHHHHHTTTTSHHHHHHHHHHCTTHHHHHHTTS-SSTTHHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHhhhhHHHHHHHhhccHHHHHHHHHHh-cChHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHhHH
Confidence 3479999999997534679999999996 88999999988 48999999998 55557777899999999999999999
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHhcccc
Q psy5772 538 PLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEE----------------------ARKMERYYEMLLLSRLIKFS 595 (654)
Q Consensus 538 ~lLL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~----------------------~~~~e~~~~l~~l~~~i~~~ 595 (654)
+|||++|+|+|| +|+|+..++.|++.++.++..+|+. +++.++..++.+++..+++.
T Consensus 354 ~LLL~~LlK~Tp-~~~D~~~L~~Al~~i~~v~~~VNe~~~~~~~k~r~~e~~~~~~~n~~kr~~e~~~~l~~lq~~i~~~ 432 (1049)
T 3ksy_A 354 FELLKQLEEKSE-DQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGW 432 (1049)
T ss_dssp HHHHHHHHHSCC-CHHHHHHHHHHHHHTHHHHHHHHHHTTSTTHHHHHHHHC-------------CCSHHHHHHHTSSSC
T ss_pred HHHHHHHHhcCC-CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999997 5599999999999999999999973 23556677889999999763
Q ss_pred cccccccccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 596 LKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 596 ~~~~~~~~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
...++..++|+|+++|.+.+.. .++ ++|+|||||+||+|
T Consensus 433 ----~~~~l~~~~r~Li~eG~l~~~~-----------~k~----~r~~FLF~D~Ll~~ 471 (1049)
T 3ksy_A 433 ----EGKDIGQCCNEFIMEGTLTRVG-----------AKH----ERHIFLFDGLMICC 471 (1049)
T ss_dssp ----CSSCGGGTCSCCCCEEEEEETT-----------CSS----CEEEEEETTEEEEE
T ss_pred ----CccccccccceEEEeceEEEEc-----------cCc----eEEEEeeCCeEEEE
Confidence 3446788999999999998662 123 89999999999998
No 21
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=99.98 E-value=2.8e-32 Score=293.29 Aligned_cols=202 Identities=16% Similarity=0.204 Sum_probs=174.3
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|..|++.|+..+.|++++|.+||++||||||||+|||++|+|+||++|||+..|+.|++.|++++..||+.+++.|+..+
T Consensus 155 f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~t~~~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~ 234 (402)
T 2dfk_A 155 YQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDK 234 (402)
T ss_dssp HHHHHHHHHHHTTCCSCCHHHHHTHHHHHHHHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhhhhcccCCHHHHHhHHHHHHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC--CCceE
Q psy5772 83 MLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS--NGSYS 160 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~--~~~~~ 160 (654)
|.+++.+|+ ++...+++.++|+||++|.+.++....+ ..+++|+|||||+||+||++. ++.|.
T Consensus 235 l~~lq~~i~----~~~~~~l~~~~r~Li~~G~l~~~~~~~~-----------k~~~r~~fLF~d~Ll~~k~~~~~~~~~~ 299 (402)
T 2dfk_A 235 IAQWQASVL----DWEGDDILDRSSELIYTGEMAWIYQPYG-----------RNQQRVFFLFDHQMVLCKKDLIRRDILY 299 (402)
T ss_dssp HHHHHHHSB----TCCSSCGGGTCCCEEEEEEEEEESSTTC-----------CCEEEEEEEETTEEEEEEECSSCTTCEE
T ss_pred HHHHHHHhc----CCCCccccccccceEEeceEEEEeccCC-----------ceEEEEEEeeCCEEEEEEeccccCCceE
Confidence 999999985 2345678899999999999988753211 125788999999999999863 46899
Q ss_pred EEeeccccceEEEEccCCCCC----CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 161 VIDYCTRAMMQMAAIEDSVPP----TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 161 ~~~~~~~~~l~v~~~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
++..+++..+.|.++.++... ..++.|.+... +....|+|+|+|+++|..|+++|++++
T Consensus 300 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~----~~~~~~~l~a~s~~eK~~Wi~~i~~a~ 362 (402)
T 2dfk_A 300 YKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNK----ETEEVHLFFAKKLEEKIRWLRAFREER 362 (402)
T ss_dssp EEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEES----SSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeeeeeccceEEEecCCCCccccccccceeEEEEEC----CCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 999999999999998775432 12467777642 234579999999999999999988766
No 22
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=99.97 E-value=8.9e-32 Score=286.77 Aligned_cols=204 Identities=18% Similarity=0.232 Sum_probs=165.4
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|+++|+.+|.|++++|.+||++||||||||+|||++|+|+||++|+|+..|++|++.|++++..||+.+++.|+..+
T Consensus 140 f~~fl~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~vN~~~~~~e~~~~ 219 (368)
T 1xcg_A 140 FQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHR 219 (368)
T ss_dssp HHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChhhccCChHHHhhhHhhhhhhHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccc-------cCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC
Q psy5772 83 MLLLSRLIKFSLKEVK-------CLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS 155 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~-------~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~ 155 (654)
|.+++++|++...+.. ...+..++|+||++|.+.+....+ ..+++|+|||||+||+||+++
T Consensus 220 l~~i~~~l~~~~~~~~~~pl~~~~~~l~~~~R~li~~G~l~~~~~~~------------~~~~~~~fLF~d~Ll~~k~~~ 287 (368)
T 1xcg_A 220 LEGYQKRLDATALERASNPLAAEFKSLDLTTRKMIHEGPLTWRISKD------------KTLDLHVLLLEDLLVLLQKQD 287 (368)
T ss_dssp HHHHHHHEECHHHHSCSCTTTGGGGGCCGGGSCEEEEEEEEECCSSS------------CCCEEEEEEESSEEEEEEECS
T ss_pred HHHHHHHhCcchhhhcccchhhhhhhcccccceEEeecceEeeecCC------------CeeEEEEEcccccHHHhhccc
Confidence 9999999975311000 113456789999999997642111 126789999999999999864
Q ss_pred C----------------CceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhccc
Q psy5772 156 N----------------GSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNK 219 (654)
Q Consensus 156 ~----------------~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~ 219 (654)
+ .+|.++..+++..+.|+++. ..++.|.+... ...|+...|+|+|+|+++|+.|+++|
T Consensus 288 ~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~-----~~~~~f~i~~~-~~~g~~~~~~l~a~s~~ek~~W~~~i 361 (368)
T 1xcg_A 288 EKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA-----TDKRAFFIICT-SKLGPPQIYELVALTSSDKNTWMELL 361 (368)
T ss_dssp SCEECCC-------------CCCSEEEGGGEEEEECS-----SCSSEEEEEEC-CSSSTTCEEEEECSSHHHHHHHHHHH
T ss_pred ccceeeeccccccCCCCcccCcCCceEccceeeeccc-----CCCceEEEEEe-cCCCCceEEEEEcCCHHHHHHHHHHH
Confidence 2 14556667788889888753 12356655432 23356678999999999999999999
Q ss_pred Ccccc
Q psy5772 220 SDKIL 224 (654)
Q Consensus 220 ~~~~~ 224 (654)
++++.
T Consensus 362 ~~ai~ 366 (368)
T 1xcg_A 362 EEAVR 366 (368)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88763
No 23
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=99.97 E-value=1.8e-31 Score=293.12 Aligned_cols=203 Identities=16% Similarity=0.186 Sum_probs=174.3
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|..|++.|+..+.|++++|.+||++||||||||+|||++|+|+||++|+|+..|++|++.|++++..||+.+++.|+..+
T Consensus 232 f~~f~~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~ 311 (466)
T 2pz1_A 232 YVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDK 311 (466)
T ss_dssp HHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhccCCHHHHhhhHHHHhhhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC--CCceE
Q psy5772 83 MLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS--NGSYS 160 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~--~~~~~ 160 (654)
|.+++.+|+. +...+++.++|+||++|.+.++....+ ..+++|+|||||+||+||++. .+.|.
T Consensus 312 l~~lq~~i~~----~~~~~l~~~~r~li~~G~l~~~~~~~~-----------~~~~r~~fLF~d~Ll~~k~~~~~~~~~~ 376 (466)
T 2pz1_A 312 IAQWQSSIED----WEGEDLLVRSSELIYSGELTRVTQPQA-----------KSQQRMFFLFDHQLIYCKKDLLRRDVLY 376 (466)
T ss_dssp HHHHHHHSBT----CCSSCHHHHCSCEEEEEEEEEECTTTC-----------CEEEEEEEEETTEEEEEEECSSCTTCEE
T ss_pred HHHHHHHhcC----CCCcccccccceeEEeeeEEEEecCCC-----------CeeEEEEEEECCEEEEEEeccccCCceE
Confidence 9999999852 345677889999999999987743211 125788999999999999863 56899
Q ss_pred EEeeccccceEEEEccCCCCC----CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 161 VIDYCTRAMMQMAAIEDSVPP----TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 161 ~~~~~~~~~l~v~~~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
++..+++..+.|.++.++... ..++.|.+.. .+....|+|+|+|+++|..|+++|++++.
T Consensus 377 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~----~~~~~~~~l~a~s~~eK~~W~~~i~~a~~ 440 (466)
T 2pz1_A 377 YKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHR----GATGDSHLLCTRKPEQKQRWLKAFARERE 440 (466)
T ss_dssp EEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEEC----SSSCCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccceEEEeCCCCcccccccccceeEEEEe----CCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 999999999999998876432 2246677653 22345799999999999999999887763
No 24
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=291.28 Aligned_cols=195 Identities=17% Similarity=0.236 Sum_probs=160.6
Q ss_pred chhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 2 TLGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYY 81 (654)
Q Consensus 2 ~~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~ 81 (654)
.|+.|+++++..|.|++++|.+||++|||||+||+|||++|+|+||++|+|+..|+.|++.|++++..+|+.+++.|+..
T Consensus 143 ~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~ 222 (434)
T 3mpx_A 143 RLAAAVREFEQSVQGGSQTAKHRLLRVVQRLFQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQ 222 (434)
T ss_dssp HHHHHHHHHHTC------CHHHHHHHHHHHHHHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHCTTHHHHH
T ss_pred HHHHHHHHHHcCcccCCCCHHHHHhhhHHhhhHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEE
Q psy5772 82 EMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSV 161 (654)
Q Consensus 82 ~l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~ 161 (654)
+|.+++..|+. ..+++.++|+||++|.+.++..++ .+++|+|||||+||+||++.+++|.+
T Consensus 223 ~l~~l~~~i~~------~~~l~~~~r~li~~g~l~~~~~~~-------------~~~r~~fLF~d~Ll~~k~~~~~~y~~ 283 (434)
T 3mpx_A 223 KLVHIEHSVRG------QGDLLQPGREFLKEGTLMKVTGKN-------------RRPRHLFLMNDVLLYTYPQKDGKYRL 283 (434)
T ss_dssp HHHHHHHHEET------CCCCCCTTCCEEECCEEEEEETTE-------------EEEEEEEEESSEEEEEEECTTSCEEE
T ss_pred HHHHHHHHhcC------ccccccCCcceEecceEEEEeCCC-------------ceEEEEEEECCEEEEEEecCCCeEEE
Confidence 99999999853 357889999999999998764321 25788999999999999998899999
Q ss_pred EeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 162 IDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 162 ~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+..+++..+.|++..+. ...+.|.+. +...+|+|+|+|+++|+.|+++|++++.
T Consensus 284 k~~i~L~~l~v~~~~~~---~~~~~f~i~------~~~~~~~l~a~s~~ek~~W~~~i~~ai~ 337 (434)
T 3mpx_A 284 KNTLAVANMKVSRPVME---KVPYALKIE------TSESCLMLSASSCAERDEWYGCLSRALP 337 (434)
T ss_dssp EEEEEC-----CCCCCT---TSCSEEEEE------CSSCEEEEECSSHHHHHHHHHHHHHC--
T ss_pred EEEEEcCCcEEEecCCC---CCCeeEEEe------cCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999764432 335677763 2334699999999999999999998884
No 25
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=99.97 E-value=1.7e-31 Score=282.16 Aligned_cols=198 Identities=21% Similarity=0.262 Sum_probs=150.5
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|+++|+++|.|++++|.+||++||||||||+|||++|+|+||++|||+..|++|++.|++++..||+.+++.|+...
T Consensus 131 f~~fl~~~~~~~~~~~l~L~~~L~~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~~~~v~~~iN~~~~~~e~~~~ 210 (346)
T 2z0q_A 131 VQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYY 210 (346)
T ss_dssp HHCC-------------CTTTGGGHHHHHHHHHHHHHHHHHHTSCTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCccCCCCCHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC-CC--ce
Q psy5772 83 MLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS-NG--SY 159 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~-~~--~~ 159 (654)
+..|+... ++...+++.++|+|+++|.+... + .+++|+|||||+||+||++. ++ .|
T Consensus 211 ~~~l~~~~-----~~~~~~l~~~~r~li~~G~l~~~--------~--------~~~~~~fLF~d~Ll~~k~~~~~~~~~~ 269 (346)
T 2z0q_A 211 KERLLYLE-----EGQKDSLIDSSRVLCCHGELKNN--------R--------GVKLHVFLFQEVLVITRAVTHNEQLCY 269 (346)
T ss_dssp HHHEECCS-----TTCCCHHHHTCCCEEEEEEEEET--------T--------SCEEEEEEESSEEEEEEEEEETTEEEE
T ss_pred HHHHHhhh-----ccCCCccccCCeEEEEeceeEEC--------C--------CcEEEEEECCCcEEEEEEeccCCceee
Confidence 54443211 13346788999999999998531 0 15778999999999999754 33 35
Q ss_pred EE-EeeccccceEEEEccCCCCC-------------CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 160 SV-IDYCTRAMMQMAAIEDSVPP-------------TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 160 ~~-~~~~~~~~l~v~~~~~~~~~-------------~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+ +..+++..+.|+++.++... ..++.|.+.+..+ +...+|+|+|+|+++|+.|+++|++++
T Consensus 270 ~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~--~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 270 QLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNG--SQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCG--GGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred eeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecC--CCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 53 45689999999998775321 1357888876543 344789999999999999999998765
No 26
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=99.97 E-value=9.8e-31 Score=283.46 Aligned_cols=205 Identities=18% Similarity=0.236 Sum_probs=167.1
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|+++|+.+|.|++++|.+||++|||||+||+|||++|+|+||++|+|+..|++|++.|++++..||+.+++.|+..+
T Consensus 182 f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~L~~A~~~i~~v~~~iN~~~~~~e~~~~ 261 (418)
T 3t06_A 182 FQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHR 261 (418)
T ss_dssp HHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccccCCHHHHHhhHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccc-------ccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC
Q psy5772 83 MLLLSRLIKFSLKEV-------KCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS 155 (654)
Q Consensus 83 l~~l~~~i~~~~~~~-------~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~ 155 (654)
|.+++.+|++...+. ....+..++|+||++|.+.+....+ ..+++|+|||+|+||+||++.
T Consensus 262 l~~i~~~l~~~~~~~~~~~~~~~~~~l~~~~r~li~eG~l~~~~~~~------------~~~~~~~fLF~d~Ll~~k~~~ 329 (418)
T 3t06_A 262 LEGYQKRLDATALERASNPLAAEFKSLDLTTRKMIHEGPLTWRISKD------------KTLDLHVLLLEDLLVLLQKQD 329 (418)
T ss_dssp HHHHHHSEECCTTSSCSCTTTTTTSSCCGGGSCEEEEEEEEECCBTT------------BCCEEEEEEESSEEEEEEECS
T ss_pred HHHHHHHhCcccccccccccchhhcccccccceeEEeceEEEEeCCC------------CeEEEEEEecCCEEEEEEEcC
Confidence 999999997632110 1123445789999999998764211 125789999999999999764
Q ss_pred C----------------CceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhccc
Q psy5772 156 N----------------GSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNK 219 (654)
Q Consensus 156 ~----------------~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~ 219 (654)
+ .+|.++..+++..+.|+++.. ....|.+... ...|...+|+|+|+|+++|+.||++|
T Consensus 330 ~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~-----~~~~f~l~~~-~~~~~~~~~~l~A~s~~ek~~W~~~I 403 (418)
T 3t06_A 330 EKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVAT-----DKRAFFIICT-SKLGPPQIYELVALTSSDKNTWMELL 403 (418)
T ss_dssp SCEECCC-------------CCCSEEEGGGEEEEECSS-----CSSEEEEEEC-CSSSTTCEEEEECSSHHHHHHHHHHH
T ss_pred CceEEeecccccccCCCcccccCCceechhceeccccc-----cCceEEEEec-CCCCCceEEEEEcCCHHHHHHHHHHH
Confidence 2 145556677899999987541 2346665542 23355578999999999999999999
Q ss_pred CccccC
Q psy5772 220 SDKILN 225 (654)
Q Consensus 220 ~~~~~~ 225 (654)
++++.+
T Consensus 404 ~~a~~~ 409 (418)
T 3t06_A 404 EEAVRN 409 (418)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 988843
No 27
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=99.97 E-value=1.2e-30 Score=281.44 Aligned_cols=200 Identities=18% Similarity=0.170 Sum_probs=165.8
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|+++|+..|.|++++|.+||++||||||||+|||++|+|+| ++|+|+..|++|++.|++++..||+.+++.|+..+
T Consensus 135 f~~~l~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t-~~~~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~~~ 213 (406)
T 2vrw_B 135 VQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHT-QDATEKENLRLALDAMRDLAQCVNEVKRDNETLRQ 213 (406)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHTTHHHHHHTTHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccccCCcchHHHhhhHHHHHhhHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEE
Q psy5772 83 MLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVI 162 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~ 162 (654)
+.+|+.+|+. ...++..++| ++++|.+.+....++ ..+++|+|||||+||+||++ +++|.++
T Consensus 214 l~~lq~~i~~-----~~~~l~~~gr-li~~G~l~~~~~~~~-----------~~~~~~~fLF~d~Ll~~k~k-~~~y~~k 275 (406)
T 2vrw_B 214 ITNFQLSIEN-----LDQSLANYGR-PKIDGELKITSVERR-----------SKTDRYAFLLDKALLICKRR-GDSYDLK 275 (406)
T ss_dssp HHHHHHHEES-----CSSCGGGGCS-EEEEEEEEEECSSCC-----------SCEEEEEEEESSEEEEEEEE-TTEEEEE
T ss_pred HHHHHHHHhC-----CCccccccCc-ccccccEEEEecCCC-----------ccceEEEEecCCEEEEEEec-CCceEEE
Confidence 9999999852 3345555555 999999987643211 01578899999999999987 5699999
Q ss_pred eeccccceEEEEccCCCC--CCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccC
Q psy5772 163 DYCTRAMMQMAAIEDSVP--PTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILN 225 (654)
Q Consensus 163 ~~~~~~~l~v~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~ 225 (654)
..+++..+.|.+..++.. ....+.|.+... +....|+|+|+|+++|+.|+++|++++.+
T Consensus 276 ~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~----~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 336 (406)
T 2vrw_B 276 ASVNLHSFQVRDDSSGERDNKKWSHMFLLIED----QGAQGYELFFKTRELKKKWMEQFEMAISN 336 (406)
T ss_dssp EEEETTTEEEEC--------CTTCEEEEEEET----TCSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEecccceeeeecCCCCccCCccceeeEEEec----CCCceEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 999999999998765432 123467776642 22346999999999999999999888753
No 28
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=99.97 E-value=1.9e-30 Score=277.53 Aligned_cols=201 Identities=18% Similarity=0.229 Sum_probs=162.2
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|+++|+.+|.|++++|.+||++||||||||+|||++|+|+||. |+|+..|+.|++.|++++.+||+.+++.|+..+
T Consensus 147 f~~~l~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~-~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~~ 225 (377)
T 3p6a_A 147 FCAFVQEAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRDMEDLLR 225 (377)
T ss_dssp HHHHHHHHHTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccCCCCHHHHHHHHHHHhhhHHHHHHHHHhhCCC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999976 899999999999999999999999999999999
Q ss_pred HHHHHHhhccccccc-------ccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC
Q psy5772 83 MLLLSRLIKFSLKEV-------KCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS 155 (654)
Q Consensus 83 l~~l~~~i~~~~~~~-------~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~ 155 (654)
|.+++++|++..-.. ....+..++|+||++|.+.+....+ ..+++|+|||||+||+||++
T Consensus 226 l~~iq~~l~~~~~~~~~~~~~~~~~~l~~~~r~li~eG~l~~~~~~~------------~~~~~~~fLF~d~Ll~~k~k- 292 (377)
T 3p6a_A 226 LKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKD------------KAVEVHVLLLDDLLLLLQRQ- 292 (377)
T ss_dssp HHHHHHHEECHHHHHCCCGGGSSSTTCCCTTSCEEEEEEEEEESSSS------------CEEEEEEEEESSEEEEEEEE-
T ss_pred HHHHHHhcCcccccccccchhhhhcccccccceEEEECCcEEEecCC------------CeEEEEEEeeCCEEEEEEEc-
Confidence 999999997631000 1112233679999999997763221 12688999999999999977
Q ss_pred CCceEEEee-----------------ccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcc
Q psy5772 156 NGSYSVIDY-----------------CTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSN 218 (654)
Q Consensus 156 ~~~~~~~~~-----------------~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~ 218 (654)
+++|.++.+ +++..+.+.++... . ..|.+.+. ..+....|+|+|+|.++|+.||++
T Consensus 293 ~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~----~-~~~~~i~~--~~~~~~~~~l~A~s~~ek~~W~~~ 365 (377)
T 3p6a_A 293 DERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD----H-KAFYVLFT--WDQEAQIYELVAQTVSERKNWCAL 365 (377)
T ss_dssp TTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC----T-TEEEEEET--TCTTCCEEEEECSSHHHHHHHHHH
T ss_pred CceeEEeecccccccCccccCCCCCeEechhhhccccccc----c-ceeEEEec--CCCCCeeEEEecCCHHHHHHHHHH
Confidence 457777753 56788888874322 2 23333322 223557799999999999999999
Q ss_pred cCcccc
Q psy5772 219 KSDKIL 224 (654)
Q Consensus 219 ~~~~~~ 224 (654)
|++++.
T Consensus 366 I~~ai~ 371 (377)
T 3p6a_A 366 ITETAG 371 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998884
No 29
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=99.97 E-value=1.8e-30 Score=278.24 Aligned_cols=201 Identities=18% Similarity=0.220 Sum_probs=160.8
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|+++|+++|.|++++|.+||++||||||||+|||++|+|+||++ +|+..|++|++.|++++..||+.++++|+..+
T Consensus 145 f~~fl~~~~~~~~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~~-~d~~~l~~Al~~i~~v~~~iN~~~~~~e~~~~ 223 (385)
T 1txd_A 145 FQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWP-TEREKVKKAADHCRQILNFVNQAVKEAENKQR 223 (385)
T ss_dssp HHHHHHHHHHSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHHTCCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCccccCCChHHHhhhHHhHhhhHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999886 89999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccC-------CcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC
Q psy5772 83 MLLLSRLIKFSLKEVKCL-------PVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS 155 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~~~-------~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~ 155 (654)
|.+++++|++..-+.... .+..++|+||++|.+.+....+ ..+++|+|||||+||+||+++
T Consensus 224 l~~i~~~l~~~~~~~~~~p~~~~~~~l~~~~R~li~eG~l~~~~~~~------------~~~~~~~fLF~d~Ll~~k~~~ 291 (385)
T 1txd_A 224 LEDYQRRLDTSSLKLSEYPNVEELRNLDLTKRKMIHEGPLVWKVNRD------------KTIDLYTLLLEDILVLLQKQD 291 (385)
T ss_dssp HHHHHHHEECCCC-------CHHHHTCCGGGSCEEEEEEEEEESSSS------------CBCCEEEEEESSEEEEEEEET
T ss_pred HHHHHHhhcchhcccccccchhhhhhcccccceEEEECcEEEEcCCC------------CeEEEEEEecCCeeEEEEecC
Confidence 999999997521001111 2345789999999997653211 125788999999999999864
Q ss_pred CCceE-----------------EEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcc
Q psy5772 156 NGSYS-----------------VIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSN 218 (654)
Q Consensus 156 ~~~~~-----------------~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~ 218 (654)
++|. ++..+++..+.|.++.. +.++.|.+.+. . +....|+|+|+|+++|+.|+++
T Consensus 292 -~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~----d~~~~f~i~~~--~-~~~~~~~l~a~s~~ek~~W~~~ 363 (385)
T 1txd_A 292 -DRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVAT----DNKALFVISMS--D-NGAQIYELVAQTVSEKTVWQDL 363 (385)
T ss_dssp -TEEECCC-------------CCCSEEEGGGEEEEECCC-----CCEEEEEEEC--S-SCEEEEEEECSSHHHHHHHHHH
T ss_pred -CeeEEeeccccccccCCCCcCCCCceeccccccccccc----CCceEEEEEEc--C-CCceEEEEEcCCHHHHHHHHHH
Confidence 3443 34556778888887532 23456665542 2 2357799999999999999999
Q ss_pred cCcccc
Q psy5772 219 KSDKIL 224 (654)
Q Consensus 219 ~~~~~~ 224 (654)
|++++.
T Consensus 364 i~~~i~ 369 (385)
T 1txd_A 364 ICRMAA 369 (385)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988873
No 30
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=99.96 E-value=1.2e-29 Score=281.57 Aligned_cols=201 Identities=18% Similarity=0.231 Sum_probs=162.3
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|..|+++|+.+|.|++++|.+||++|||||+||+|||++|+|+||. |+|+..|++|++.|++++.+||+.++++|+..+
T Consensus 300 f~~fl~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~LlK~T~~-~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~k 378 (536)
T 3odw_A 300 FCAFVQEAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEE-PTEREKVELAAECCREILHHVNQAVRDMEDLLR 378 (536)
T ss_dssp HHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999976 899999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccc-------cCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC
Q psy5772 83 MLLLSRLIKFSLKEVK-------CLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS 155 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~-------~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~ 155 (654)
|.+|+++|++..-... ...+..++|+||++|.+.+....++ .+++|+|||+|+||+||++.
T Consensus 379 L~~iq~~L~~~~~~~~~~~~i~~~~~ldl~~R~LI~eG~l~~~~~~~k------------~~~r~~fLF~D~LL~~k~k~ 446 (536)
T 3odw_A 379 LKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDK------------AVEVHVLLLDDLLLLLQRQD 446 (536)
T ss_dssp HHHHHHHEECTTTTTC---CCTTSSSCCCTTSCEEEEEEEEEESCC---------------CEEEEEEESSEEEEEEEET
T ss_pred HHHHHHHhcccccccccccchhhhcccccccceeeeecceEEEecCCC------------eeEEEEEEcCCEEEEEEEcC
Confidence 9999999976421100 1122336899999999977642211 25789999999999999875
Q ss_pred CCceEEEee-----------------ccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcc
Q psy5772 156 NGSYSVIDY-----------------CTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSN 218 (654)
Q Consensus 156 ~~~~~~~~~-----------------~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~ 218 (654)
++|.++.+ +++..+.|.++.. ....|.+.+.. ......|+|+|.|.++|+.||++
T Consensus 447 -~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~-----d~~~ffli~~~--~~~~~~~~L~A~S~eEK~~W~~~ 518 (536)
T 3odw_A 447 -ERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVAT-----DHKAFYVLFTW--DQEAQIYELVAQTVSERKNWCAL 518 (536)
T ss_dssp -TEEECCCC------------CCCSEEEGGGEEEEECTT-----CTTEEEEEEC-----CCCEEEEECSSHHHHHHHHHH
T ss_pred -CeEEEeecccccccccccccccCceeecccceeecccc-----cCCceEEEecC--CCCceEEEEECCCHHHHHHHHHH
Confidence 47877764 6778888888542 22344444322 23446799999999999999999
Q ss_pred cCcccc
Q psy5772 219 KSDKIL 224 (654)
Q Consensus 219 ~~~~~~ 224 (654)
|+++|.
T Consensus 519 I~~aI~ 524 (536)
T 3odw_A 519 ITETAG 524 (536)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999984
No 31
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=99.96 E-value=2.1e-30 Score=274.62 Aligned_cols=194 Identities=13% Similarity=0.127 Sum_probs=159.0
Q ss_pred hhhHHHH-hhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHH---------
Q psy5772 3 LGPLWFP-LESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNE--------- 72 (654)
Q Consensus 3 ~~~~l~~-~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~--------- 72 (654)
|+.|+++ ++..+.|++++|.+||++||||||||+|||++|+|+|| +|||+..|++|++.|++++..||+
T Consensus 123 f~~~l~~~~~~~~~~~~~~L~~~Li~PvQRi~rY~LLL~~llk~t~-~~~d~~~L~~Al~~~~~v~~~in~~~~~~~~~r 201 (354)
T 1dbh_A 123 AALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSE-DQEDKECLKQAITALLNVQSGMEKICSKSLAKR 201 (354)
T ss_dssp HHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHTHHHHHHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhchHHHHHHHHHhcCC-CCccHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 6777777 55678899999999999999999999999999999996 599999999999999999999876
Q ss_pred -------------HHHHHHHHHHHHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceE
Q psy5772 73 -------------EARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKL 139 (654)
Q Consensus 73 -------------~~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~ 139 (654)
.+++.++..++.+++..|+. +...++..++|+|+++|.+.+++ + .+++
T Consensus 202 ~~~e~~~~~~~ne~~r~~e~~~~l~~lq~~i~~----~~~~~l~~~~r~li~eG~l~~~g-------~--------~~~~ 262 (354)
T 1dbh_A 202 RLSESACRFYSQQMKGKQLAIKKMNEIQKNIDG----WEGKDIGQCCNEFIMEGTLTRVG-------A--------KHER 262 (354)
T ss_dssp HHHHTC-------------CTHHHHHHHTTEES----CCSSCGGGTCCCEEEEEEEEETT-------C--------SSCE
T ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHHHHhcC----CCCcccccccceEEEEeeEEEEe-------c--------CceE
Confidence 66777888899999999852 33457788899999999997661 0 1577
Q ss_pred EEEecCCeEEEEEec---------CCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChh
Q psy5772 140 NLFLFTDLLVITKKK---------SNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTES 210 (654)
Q Consensus 140 ~~fLF~d~Ll~~k~~---------~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~ 210 (654)
|+|||||+||+||++ .++.|.++..+++..+.|.+..+++ ..++.|.+... + ...|+|+|+|++
T Consensus 263 ~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~--~~~~~F~i~~~----~-~~~~~l~a~s~~ 335 (354)
T 1dbh_A 263 HIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN--EYKHAFEIILK----D-ENSVIFSAKSAE 335 (354)
T ss_dssp EEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS--SCCSEEEECCT----T-SCCEEEECSSHH
T ss_pred EEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCccc--ccCccEEEecC----C-CCEEEEEeCCHH
Confidence 899999999999986 3468999999999999999987654 23578877532 1 246999999999
Q ss_pred hhhhhhcccCccc
Q psy5772 211 ESSLNVSNKSDKI 223 (654)
Q Consensus 211 ~k~~W~~~~~~~~ 223 (654)
+|..|+++|+++.
T Consensus 336 ek~~W~~~i~~~~ 348 (354)
T 1dbh_A 336 EKNNWMAALISLQ 348 (354)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998766
No 32
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.96 E-value=1.8e-29 Score=284.20 Aligned_cols=201 Identities=18% Similarity=0.175 Sum_probs=166.7
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|..|+++++..|.|++++|.+||++|||||+||+|||++|+|+|| +|+|+..|+.|++.|++++..||+.+++.|+..+
T Consensus 307 f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~T~-~~~d~~~L~~Al~~i~~v~~~iNe~~r~~e~~~~ 385 (587)
T 3ky9_A 307 VQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQ-EAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQ 385 (587)
T ss_dssp HHTTTTHHHHHHHSSSCCHHHHHHHHHHHHTTHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccCCCCHHHHHhHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999999999999999999996 7999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEE
Q psy5772 83 MLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVI 162 (654)
Q Consensus 83 l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~ 162 (654)
|.+|+++|+. ...++..++| ++++|.+.+....++ ..+++|+|||||+||+||++ +++|.++
T Consensus 386 l~~lq~~i~~-----~~~~l~~~gr-ll~~G~l~~~~~~~~-----------~~~~r~~fLF~d~Ll~~k~~-~~~y~~k 447 (587)
T 3ky9_A 386 ITNFQLSIEN-----LDQSLAHYGR-PKIDGELKITSVERR-----------SKMDRYAFLLDKALLICKRR-GDSYDLK 447 (587)
T ss_dssp HHHHHHHEET-----CCSCGGGGCC-EEEEEEEEEECSSCC-----------SCEEEEEEEETTEEEEEEEE-TTEEEEE
T ss_pred HHHHHHHhhc-----CccchhhcCc-eEEEeeEEEEeccCC-----------CcceEEEEEECCEEEEEEec-CCEEEee
Confidence 9999999963 3445566665 899999987643221 12578899999999999988 6799999
Q ss_pred eeccccceEEEEccCCCCC--CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccCC
Q psy5772 163 DYCTRAMMQMAAIEDSVPP--TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILNS 226 (654)
Q Consensus 163 ~~~~~~~l~v~~~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~~ 226 (654)
..+++..+.|++..+++.. ...+.|.+.... ....|+|+|+|+++|+.|++.|++++.+.
T Consensus 448 ~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~----~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 448 DFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQ----GAQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp EEEEGGGEEEEEC-----CCCTTCEEEEEEETT----C---CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eeechhhceeeecCCCCcccccccceeEEEEcC----CCceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 9999999999998765432 234677776432 23569999999999999999999888533
No 33
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=99.96 E-value=8.6e-29 Score=264.40 Aligned_cols=209 Identities=16% Similarity=0.197 Sum_probs=160.5
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|+.|++.++..+ |++++|.+||++||||||||+|||++|+|+||++|+|+..|+.|++.|++++.+||+.++..|+..+
T Consensus 136 f~~fl~~~~~~~-~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~~~~v~~~iNe~~r~~e~~~~ 214 (377)
T 1foe_A 136 FKAFLDAQNPRQ-QHSSTLESYLIKPIQRVLKYPLLLRELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGA 214 (377)
T ss_dssp HHHHHHHHCTTC-CGGGSHHHHTTHHHHHHTTHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc-ccCcCHHHHhccchhhhccHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999998765 8999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHH-HHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC------
Q psy5772 83 MLLL-SRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS------ 155 (654)
Q Consensus 83 l~~l-~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~------ 155 (654)
+.+. ...+.+. .+..++++ .++|+++|.+.++.+.... ++.. ..+++|+|||+|+||+|++..
T Consensus 215 ~~~~l~~~~~~~---~~~~~~~~-~g~ll~~~~~~~~~~~~~~---~~~~---k~~~~~~fLF~d~lll~~k~~~~~k~~ 284 (377)
T 1foe_A 215 VFDQLIAEQTGE---KKEVADLS-MGDLLLHTSVIWLNPPASL---GKWK---KEPELAAFVFKTAVVLVYKDGSKQKKK 284 (377)
T ss_dssp HHHHHHTTCSSC---SCSSCCCC-GGGEEEEEEEEESSCCHHH---HTTC---SSCEEEEEEETTEEEEEECCCCCSCCS
T ss_pred HHHHHHHhcccc---cccccccC-ccceeeecceeeccCchhh---cccc---ccceEEEEEcCCeEEEEeccccccccc
Confidence 7542 2233222 22233333 4568999999887543221 1111 125788999999998875421
Q ss_pred ------------CCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeec-CCCc-cEEEEEEcCChhhhhhhhcccCc
Q psy5772 156 ------------NGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILEN-HEQK-TVEIVLSCDTESESSLNVSNKSD 221 (654)
Q Consensus 156 ------------~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~-~~~~-~~~~~l~a~s~~~k~~W~~~~~~ 221 (654)
++.|.++..+++..+.|.++.+++... ...|.+..... ..|+ ..+|+|+|+|+++|+.|+++|++
T Consensus 285 ~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~-~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~ 363 (377)
T 1foe_A 285 LVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADAEA-NAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHS 363 (377)
T ss_dssp SCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTTTS-CCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHH
T ss_pred cccccccccccCCCceeEeeeccccceEEEecCCCccch-hhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHH
Confidence 237899999999999999988765432 23455543322 2343 47799999999999999999988
Q ss_pred cc
Q psy5772 222 KI 223 (654)
Q Consensus 222 ~~ 223 (654)
++
T Consensus 364 ~i 365 (377)
T 1foe_A 364 IL 365 (377)
T ss_dssp HH
T ss_pred Hh
Confidence 77
No 34
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=99.95 E-value=5.4e-28 Score=255.50 Aligned_cols=193 Identities=17% Similarity=0.182 Sum_probs=148.9
Q ss_pred hHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 5 PLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEML 84 (654)
Q Consensus 5 ~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~l~ 84 (654)
.|++.|+.. .|++++|.+||++||||||||+|||++|+|+|| +|+|+..|++|++.|++++..||+.+++.
T Consensus 125 ~f~~~~~~~-~~~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~-~~~d~~~L~~Al~~i~~v~~~iN~~~~~~------- 195 (353)
T 1kz7_A 125 PFFQECQKK-LDHKLSLDSYLLKPVQRITKYQLLLKEMLKYSK-HCEGAEDLQEALSSILGILKAVNDSMHLI------- 195 (353)
T ss_dssp HHHHHHHHH-HTCSSCHHHHHTHHHHHHHHHHHHHHHHHHTCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred hHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 577788765 489999999999999999999999999999997 58999999999999999999999988743
Q ss_pred HHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC--------C
Q psy5772 85 LLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS--------N 156 (654)
Q Consensus 85 ~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~--------~ 156 (654)
.|. +...+ +.+.|+||++|.+.++...+.+..+.|.......+++|+|||||+||+||++. .
T Consensus 196 ----~i~-----~~~~~-L~~~g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~ 265 (353)
T 1kz7_A 196 ----AIT-----GYDGN-LGDLGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKA 265 (353)
T ss_dssp ----TEE-----SCCSC-GGGGCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCS
T ss_pred ----HHh-----CCCCC-hhHhhhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCC
Confidence 232 11123 45567799999998775432221111110011236789999999999999863 1
Q ss_pred CceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 157 GSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 157 ~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
..|.++..+++..+.|++..++ ..+.|.+.+ .|+...|+|+|+|+++|+.|+++|++++.
T Consensus 266 ~~y~~k~~i~l~~~~v~e~~~~----~~~~F~i~~----~~~~~~~~l~a~s~~ek~~W~~~i~~ai~ 325 (353)
T 1kz7_A 266 PSYSYKQSLNMTAVGITENVKG----DTKKFEIWY----NAREEVYIIQAPTPEIKAAWVNAIRKVLT 325 (353)
T ss_dssp CEEEEEEEEEGGGEEEECCBTT----BTTEEEEEE----TTTTEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEeEcccceeeEcCCC----CCceEEEEE----CCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 5899999999999999876543 246787764 45568899999999999999999998884
No 35
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=99.95 E-value=3.1e-27 Score=249.75 Aligned_cols=192 Identities=12% Similarity=0.171 Sum_probs=149.0
Q ss_pred hHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 5 PLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEML 84 (654)
Q Consensus 5 ~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~l~ 84 (654)
.+++.|.. +.|++++|.+||++||||||||+|||++|+|+||++|||+..|++|++.|++++..||+.++.
T Consensus 121 ~~f~~~~~-~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~v~~~in~~~~~-------- 191 (354)
T 2rgn_B 121 SYFEELRQ-QLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTADLEQAVEVMCFVPKRCNDMMTL-------- 191 (354)
T ss_dssp HHHHHHHH-HHCCSSCHHHHTTHHHHHHTSHHHHHHHHHHHTSSSCSCHHHHHHHHHHHHHHHHHHHHHHHG--------
T ss_pred HHHHHHHH-hcCCCCCHHHHhhhHHHHHhHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 34556654 578999999999999999999999999999999999999999999999999999999998763
Q ss_pred HHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCC-------C
Q psy5772 85 LLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSN-------G 157 (654)
Q Consensus 85 ~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~-------~ 157 (654)
.+++. +. ..+...++|+++|.+.+..+..+.... ...+++|+|||||+||+||++.. .
T Consensus 192 ---~~i~~----~~--~~l~~~~~Ll~~g~~~v~~~~~~~~~~------~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~ 256 (354)
T 2rgn_B 192 ---GRLRG----FE--GKLTAQGKLLGQDTFWVTEPEAGGLLS------SRGRERRVFLFEQIIIFSEALGGGVRGGTQP 256 (354)
T ss_dssp ---GGCBS----CC--SCSTTSCCEEEEEEEEEECC-------------CCCCEEEEEEESSEEEEEEECC--------C
T ss_pred ---HHHhC----Ch--hhhhhhccccccceEEEEcCCcCcccc------CCCceEEEEEeCCcEEEEEeccCCCCCCCCC
Confidence 12321 11 124567789999999776543221101 11267899999999999998753 2
Q ss_pred ceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccC
Q psy5772 158 SYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILN 225 (654)
Q Consensus 158 ~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~ 225 (654)
.|.++..+++..+.|++..++ .++.|.+.+... .+....|+|+|+|+++|+.|+++|++++.+
T Consensus 257 ~y~~k~~i~l~~~~v~~~~~~----~~~~F~i~~~~~-~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 257 GYVYKNSIKVSCLGLEGNLQG----DPCRFALTSRGP-EGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp CEEEEEEEEGGGEEEEESGGG----CTTEEEEEEECS-SSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ceEEcceeeccceeeeeccCC----CCceEEEEecCC-CCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 799999999999999875432 347898876432 344678999999999999999999988843
No 36
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.94 E-value=4.4e-29 Score=277.82 Aligned_cols=199 Identities=21% Similarity=0.285 Sum_probs=0.0
Q ss_pred chhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 2 TLGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYY 81 (654)
Q Consensus 2 ~~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~ 81 (654)
.|+.|+++|+.+|.|++++|.+||++|||||+||+|||++|+|+||++|+|+..|++|++.|++++.+||+.+++.|+..
T Consensus 142 ~f~~~~~~~~~~~~~~~l~L~~~L~~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~in~~~~~~e~~~ 221 (510)
T 3jzy_A 142 DFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLIRSILENTPESHADHSSLKLALERAEELCSQVNEGVREKENSD 221 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCccccCCCHHHHhChhhhhhcCcHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccccccCCc-------ccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEec
Q psy5772 82 EMLLLSRLIKFSLKEVKCLPV-------ISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKK 154 (654)
Q Consensus 82 ~l~~l~~~i~~~~~~~~~~~l-------~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~ 154 (654)
+|.+|++++.+.+ ...++ ..+.|+||++|.+.+.. + .+++|+|||+|+||+||++
T Consensus 222 ~l~~l~~~l~~~g---~~~~l~~~~~~~~~~~r~li~eG~l~~~~-------~--------~~~~~~fLF~d~Ll~~k~~ 283 (510)
T 3jzy_A 222 RLEWIQAHVQCEG---LAEQLIFNSLTNCLGPRKLLHSGKLYKTK-------S--------NKELHGFLFNDFLLLTYMV 283 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhccccC---ccccccccccccccccceeEEeceEEEcC-------C--------CcEEEEEcccceeEEeeec
Confidence 9999999987642 11222 24679999999996431 0 1567899999999999954
Q ss_pred CC----------------CceEE-EeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhc
Q psy5772 155 SN----------------GSYSV-IDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVS 217 (654)
Q Consensus 155 ~~----------------~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~ 217 (654)
.. ..|.+ +..++++.+.|.+..+.. ..++.|.+.. +..+|+|+|+|+++|..|++
T Consensus 284 ~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~--~~~~~F~i~~------~~~~~~l~a~s~~ek~~W~~ 355 (510)
T 3jzy_A 284 KQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPS--SDEPVFHISH------IDRVYTLRTDNINERTAWVQ 355 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCcccccCcccccceeEEcCceehhheEEeccCCCC--ccccceeeec------cceeEEeccCCHHHHHHHHH
Confidence 32 23444 566788888888865542 2346777653 23469999999999999999
Q ss_pred ccCccccCC
Q psy5772 218 NKSDKILNS 226 (654)
Q Consensus 218 ~~~~~~~~~ 226 (654)
+|++++...
T Consensus 356 ~i~~ai~~~ 364 (510)
T 3jzy_A 356 KIKAASEQY 364 (510)
T ss_dssp ---------
T ss_pred HHHHHHHHH
Confidence 999888533
No 37
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=99.93 E-value=1.5e-26 Score=240.40 Aligned_cols=185 Identities=18% Similarity=0.193 Sum_probs=144.4
Q ss_pred hhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 4 GPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEM 83 (654)
Q Consensus 4 ~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~l 83 (654)
+.|++.|+..+. .+++|.+||++||||||||+|||++|+|+||++|+| ++.|++.|++++..+|+.++..
T Consensus 119 ~~f~~~~~~~~~-~~l~L~~~Li~PvQRi~rY~LLL~~llk~t~~~h~~---l~~Al~~~~~v~~~~N~~~~~~------ 188 (311)
T 1nty_A 119 GSYFDEIQQRHG-LANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGE---IKDGLEVMLSVPKRANDAMHLS------ 188 (311)
T ss_dssp TTHHHHHHHHHT-CSSCHHHHHTHHHHHHHHHHHHHHHHHHTSCTTCTT---HHHHHHHHHHHHHHHHHHHHHT------
T ss_pred HHHHHHHHHhcc-CCCCHHHHhhhhHHHHHHHHHHHHHHHHhCCCCcHH---HHHHHHHHHHHHHHHHHHHHHH------
Confidence 457778877664 479999999999999999999999999999999876 8899999999999999987631
Q ss_pred HHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCC----Cce
Q psy5772 84 LLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSN----GSY 159 (654)
Q Consensus 84 ~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~----~~~ 159 (654)
.++ +. ...+...|+|+++|.+.++.++.. .+ ..+++|+|||+|+||+||+++. .+|
T Consensus 189 -----~l~-----~~-~~~l~~~g~li~~~~~~~~~~~~~---~~------~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y 248 (311)
T 1nty_A 189 -----MLE-----GF-DENIESQGELILQESFQVWDPKTL---IR------KGRERHLFLFEMSLVFSKEVKDSSGRSKY 248 (311)
T ss_dssp -----TEE-----SC-CSCSGGGCCEEEEEEEEEECSSSS---SC------CEEEEEEEEESSEEEEEEEEECTTCCEEE
T ss_pred -----HHh-----CC-CCChHhcCCceeeeeEEEEcCccc---cc------ccceeEEEeccCeEEEEEeeccCCCCcee
Confidence 232 11 123456677999999987743211 01 1267899999999999998642 379
Q ss_pred EEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 160 SVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 160 ~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.++..++++.+.|.+..++. .+.|.+.+... .+....|+|+|+|+++|..|+++|++++
T Consensus 249 ~~k~~i~l~~~~v~e~~~~~----~~~F~i~~~~~-~~~~~~~~l~a~s~~ek~~W~~~i~~~i 307 (311)
T 1nty_A 249 LYKSKLFTSELGVTEHVEGD----PCKFALWVGRT-PTSDNKIVLKASSIENKQDWIKHIREVI 307 (311)
T ss_dssp EEEEEEEGGGEEEECCCTTC----TTEEEEEESSS-CCTTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeeeeeccceeeEEccCCC----CceEEEEeCCC-CCCCceEEEECCCHHHHHHHHHHHHHHH
Confidence 99999999999998765432 46888776322 2344569999999999999999998876
No 38
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=99.92 E-value=1.6e-26 Score=274.69 Aligned_cols=195 Identities=12% Similarity=0.122 Sum_probs=158.3
Q ss_pred chhhHHHH-hhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHH-------
Q psy5772 2 TLGPLWFP-LESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEE------- 73 (654)
Q Consensus 2 ~~~~~l~~-~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~------- 73 (654)
.|..|+++ ++..|.|++++|.+||++||||||||+|||++|+|+|| +|+|+..|++|++.|++++..||+.
T Consensus 319 ~f~~fl~~~~~~~~~~~~l~L~s~LikPvQRI~rY~LLL~~LlK~Tp-~~~D~~~L~~Al~~i~~v~~~VNe~~~~~~~k 397 (1049)
T 3ksy_A 319 GAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSE-DQEDKECLKQAITALLNVQSGMEKICSKSLAK 397 (1049)
T ss_dssp THHHHHHHHCTTHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTHHHHHHHHHHTTSTTHH
T ss_pred HHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHhHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 37788888 77779999999999999999999999999999999995 6699999999999999999999973
Q ss_pred ---------------HHHHHHHHHHHHHHHhhcccccccccCCcccCCceEEeecceEEEecCccchhhhhcccccccce
Q psy5772 74 ---------------ARKMERYYEMLLLSRLIKFSLKEVKCLPVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAK 138 (654)
Q Consensus 74 ---------------~~~~e~~~~l~~l~~~i~~~~~~~~~~~l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~ 138 (654)
+|+.++..++.+++..++. +...++..++|+||++|.+.+.. . + ++
T Consensus 398 ~r~~e~~~~~~~n~~kr~~e~~~~l~~lq~~i~~----~~~~~l~~~~r~Li~eG~l~~~~--------~---k----~~ 458 (1049)
T 3ksy_A 398 RRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDG----WEGKDIGQCCNEFIMEGTLTRVG--------A---K----HE 458 (1049)
T ss_dssp HHHHHHC-------------CCSHHHHHHHTSSS----CCSSCGGGTCSCCCCEEEEEETT--------C---S----SC
T ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhc----CCccccccccceEEEeceEEEEc--------c---C----ce
Confidence 3566777889999999852 44567788999999999997542 1 1 57
Q ss_pred EEEEecCCeEEEEEecCC---------CceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCCh
Q psy5772 139 LNLFLFTDLLVITKKKSN---------GSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTE 209 (654)
Q Consensus 139 ~~~fLF~d~Ll~~k~~~~---------~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~ 209 (654)
+|+|||||+||+||++.. .+|.++..+++..+.|.++.++.. .++.|.+.. .+ ..+|+|+|+|+
T Consensus 459 r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~--~~~~F~I~~----~~-~~~~~L~A~S~ 531 (1049)
T 3ksy_A 459 RHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNE--YKHAFEIIL----KD-ENSVIFSAKSA 531 (1049)
T ss_dssp EEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSS--CCSEEEECC----TT-SCCEEEECSSH
T ss_pred EEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCcc--ccceEEEEc----CC-CCEEEEeCCCH
Confidence 889999999999998742 369999999999999988766542 356777642 11 25699999999
Q ss_pred hhhhhhhcccCccc
Q psy5772 210 SESSLNVSNKSDKI 223 (654)
Q Consensus 210 ~~k~~W~~~~~~~~ 223 (654)
++|+.|+++|+...
T Consensus 532 eeK~~Wi~~I~~~q 545 (1049)
T 3ksy_A 532 EEKNNWMAALISLQ 545 (1049)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999876544
No 39
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=99.76 E-value=3.9e-20 Score=175.32 Aligned_cols=158 Identities=14% Similarity=0.149 Sum_probs=120.3
Q ss_pred hcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-c---c---ccCCcccCCceEEeecceEE
Q psy5772 45 RLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLK-E---V---KCLPVISSSRWLVRSGSMNF 117 (654)
Q Consensus 45 ~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~l~~l~~~i~~~~~-~---~---~~~~l~~~~r~li~~G~l~~ 117 (654)
||+++|+|+..|++|++.|++++.+||+.++++|+..+|.+|+.+|+...- . . ...++ ..|+|+++|.|.+
T Consensus 2 ~T~~~~~e~~~L~~Al~~ik~i~~~VNe~vre~E~~~rL~eiq~~l~~~~~~~~~~~~~f~~~dL--~~R~Ll~eG~L~~ 79 (185)
T 2lg1_A 2 MTKDNEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKSGQMFAKEDL--KRKKLVRDGSVFL 79 (185)
T ss_dssp CSSTTTSCCTTSCCSSSSSTTTSGGGGGGHHHHHHHHHHHHHHHSSCSSCCEECTTSCEECHHHH--TTSCEEEEEEEEE
T ss_pred CCCCCcHhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccccccccccccccc--CCCceeeeceEEE
Confidence 799999999999999999999999999999999999999999999985320 0 0 11233 3599999999986
Q ss_pred EecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEe------eccccceEEEEccCCCCCCCCceEEEEE
Q psy5772 118 VNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVID------YCTRAMMQMAAIEDSVPPTNKYLILLTI 191 (654)
Q Consensus 118 ~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~f~~~~ 191 (654)
....+ ..+++|+|||||+||+|+++ +++|.++. .+++..+.|.++.. +. ..|.+..
T Consensus 80 k~~~~------------~~~d~~~fLf~D~Ll~~~~~-~~ky~~~~~~~~~pvi~L~~~~vre~a~----d~-~~~fli~ 141 (185)
T 2lg1_A 80 KNAAG------------RLKEVQAVLLTDILVFLQEK-DQKYIFASLDQKSTVISLKKLIVREVAH----EE-KGLFLIS 141 (185)
T ss_dssp ECTTC------------CEEEEEEEEESSEEECCEEE-TTEEECCCCSSSCSEEESSSCEEECCSS----CS-SEEEEEC
T ss_pred eccCC------------CeeeEEEEeecCEEEEEEec-CCEEEEEcccCCCCeEeecceEEeccCC----CC-CeEEEEE
Confidence 63211 12689999999999999986 66888864 24566777776543 22 3333322
Q ss_pred eecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 192 LENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 192 ~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
....| ...|+|+|+|+++|+.|+..|++++.
T Consensus 142 -~~~~g-~~~yel~a~s~~er~~W~~~I~~Ai~ 172 (185)
T 2lg1_A 142 -MGMTD-PEMVEVHASSKEERNSWIQIIQDTIN 172 (185)
T ss_dssp -CSSSC-CCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -ecCCC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 12223 45699999999999999999998884
No 40
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=99.70 E-value=3.3e-18 Score=175.09 Aligned_cols=86 Identities=29% Similarity=0.483 Sum_probs=79.9
Q ss_pred hhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 3 LGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYE 82 (654)
Q Consensus 3 ~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~~~ 82 (654)
|..|+++|+.+|.|++++|.+||++||||||||+|||++|+|+||++|+|+..|+.|++.|++++..||+.+++.|+..+
T Consensus 198 f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~A~~~i~~v~~~iNe~~r~~e~~~~ 277 (283)
T 3jv3_A 198 FKEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDR 277 (283)
T ss_dssp HHHHHHHHTTSGGGTTCCHHHHTTHHHHHHHHHHHHHHHHHTTSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhCccccCCCHHHHhhhhHHHhcchHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHhHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy5772 83 MLLLSR 88 (654)
Q Consensus 83 l~~l~~ 88 (654)
|.+||.
T Consensus 278 l~~iQs 283 (283)
T 3jv3_A 278 LEWIQA 283 (283)
T ss_dssp C-----
T ss_pred HHHhhC
Confidence 888763
No 41
>1by1_A Protein (PIX); RHO-GTPase exchange factor, transport protein; NMR {Homo sapiens} SCOP: a.87.1.1
Probab=99.63 E-value=1e-16 Score=156.10 Aligned_cols=78 Identities=18% Similarity=0.312 Sum_probs=72.3
Q ss_pred chhhHHHHhhcCCCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 2 TLGPLWFPLESDPVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEEARKMERY 80 (654)
Q Consensus 2 ~~~~~l~~~e~~~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~~~~~~e~~ 80 (654)
.|+.|++.|+ .+.|++++|.+||++||||||||+|||++|+|+||++|||+..|+.|++.|++++..||+.+++.|+.
T Consensus 123 ~f~~fl~~~~-~~~~~~l~L~s~Li~PvQRi~rY~LLL~~Llk~t~~~h~d~~~l~~Al~~i~~v~~~iNe~~r~~e~~ 200 (209)
T 1by1_A 123 ELGEFMETKG-ASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQCQEVRKRKELE 200 (209)
T ss_dssp THHHHTTTTC-CCSSTTTHHHHHTTSTTTGGGTHHHHHHHHHHSSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHhc-CCCCCcCCHHHHhhHHHHHHhHHHHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678888885 46799999999999999999999999999999999999999999999999999999999999887764
No 42
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=99.48 E-value=6.4e-14 Score=121.21 Aligned_cols=103 Identities=13% Similarity=0.174 Sum_probs=80.2
Q ss_pred ccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCC--CceEEEeeccccceEEEEccCCCC
Q psy5772 103 ISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSN--GSYSVIDYCTRAMMQMAAIEDSVP 180 (654)
Q Consensus 103 ~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~--~~~~~~~~~~~~~l~v~~~~~~~~ 180 (654)
-.|+|+||++|.+++++.... +. .+.+|+|||||+||+|+++.+ |.|.+....++..+.|.++.+..
T Consensus 2 ~~pgR~lv~eG~l~el~~~~~--------k~--~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~- 70 (113)
T 1zc3_B 2 ETPGQYLVYNGDLVEYEADHM--------AQ--LQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNP- 70 (113)
T ss_dssp ---CCCEEEEEEEEEEETTTC--------CE--EEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBT-
T ss_pred CCCCeEEEEeCcEEEEccccC--------CC--CccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCc-
Confidence 368999999999998864221 11 146789999999999998643 56888888899999999987755
Q ss_pred CCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 181 PTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 181 ~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
..+|.|.+.. ...+++++|.|+++|.+|++++++++
T Consensus 71 -~~~n~f~i~~------~~~s~~~~aes~~eK~~Wl~~~~~a~ 106 (113)
T 1zc3_B 71 -PMKDMFKLLM------FPESRIFQAENAKIKREWLEVLEETK 106 (113)
T ss_dssp -TBSSEEEEEE------TTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -ccceEEEEEe------CCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 3478999874 23459999999999999999988765
No 43
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=99.47 E-value=1e-13 Score=122.02 Aligned_cols=110 Identities=23% Similarity=0.177 Sum_probs=82.3
Q ss_pred cccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEE----ecCCCceEEEeeccccceEEEEccC
Q psy5772 102 VISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITK----KKSNGSYSVIDYCTRAMMQMAAIED 177 (654)
Q Consensus 102 l~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k----~~~~~~~~~~~~~~~~~l~v~~~~~ 177 (654)
|..|+|+||+.+.|..+.+..+.. +|. .+.|++|||||+||+|| ++.+++|.+..+.++..+.|...++
T Consensus 6 L~~phRrlvc~~~l~ev~d~~K~~--~kg-----~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~ 78 (140)
T 3qwm_A 6 LSLPHRRLVCYCRLFEVPDPNKPQ--KLG-----LHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFEN 78 (140)
T ss_dssp ----CCCEEEEEEEEECSCTTSCC--CTT-----TTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECC
T ss_pred eccCCceEEEEEeeeeeccCcccc--ccc-----ccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccC
Confidence 568999999999998886443321 111 26788999999999997 5567899999999999999999876
Q ss_pred CCCCCCCceEEEEEeecCCC--ccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 178 SVPPTNKYLILLTILENHEQ--KTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 178 ~~~~~~~~~f~~~~~~~~~~--~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
... .|.|. +..+..| +..+++|.|+|+++|..||.+++.+|
T Consensus 79 e~~---p~~~~--l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI 121 (140)
T 3qwm_A 79 QYY---PNGIR--LTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESI 121 (140)
T ss_dssp SSC---TTEEE--EEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCC---ceEEE--EEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHH
Confidence 542 35555 4455545 45679999999999999999998877
No 44
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=99.27 E-value=1.3e-12 Score=113.25 Aligned_cols=101 Identities=9% Similarity=0.090 Sum_probs=80.6
Q ss_pred ccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC---CCceEEEeeccccceEEEEccC-C
Q psy5772 103 ISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS---NGSYSVIDYCTRAMMQMAAIED-S 178 (654)
Q Consensus 103 ~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~---~~~~~~~~~~~~~~l~v~~~~~-~ 178 (654)
+...++|+++|.+.++..+ +| -++||+|||+++|||||++. ...|.++..++++.+.|++... +
T Consensus 4 L~~~G~Ll~q~~f~V~~~~------~k------~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~~ 71 (119)
T 1fho_A 4 TGKLGRIIRHDAFQVWEGD------EP------PKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDE 71 (119)
T ss_dssp CCCCCCSSEEEEEEECSTT------CS------CEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTTC
T ss_pred hHHcCCccccCceEEEeCC------CC------cceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCCC
Confidence 4566779999999998643 11 16789999999999999873 3589999999999999999654 2
Q ss_pred CCCCCCceEEEEEeecCCCccEEEEE--EcCChh-hhhhhhcccCccc
Q psy5772 179 VPPTNKYLILLTILENHEQKTVEIVL--SCDTES-ESSLNVSNKSDKI 223 (654)
Q Consensus 179 ~~~~~~~~f~~~~~~~~~~~~~~~~l--~a~s~~-~k~~W~~~~~~~~ 223 (654)
++ ..|..+..++...|++ +|+|.+ .|+.|+++|++.+
T Consensus 72 d~--------~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~ 111 (119)
T 1fho_A 72 DT--------IVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQ 111 (119)
T ss_dssp CE--------EEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCC
T ss_pred CC--------cEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHH
Confidence 21 2466667777778999 999999 9999999998743
No 45
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=99.16 E-value=2.6e-12 Score=121.44 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=77.1
Q ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc----cc---cccccccCCceEEEEeeeEE
Q psy5772 547 RLRPNHSEYETCHTTLATLNKIVHECNEEARKMERYYEMLLLSRLIKFSLK----EV---KCLPVISSSRWLVRSGSMNF 619 (654)
Q Consensus 547 ~t~~~~~d~~~l~~al~~i~~l~~~~n~~~~~~e~~~~l~~l~~~i~~~~~----~~---~~~~l~~~~R~Li~~G~l~~ 619 (654)
||+++|+|+..|++|++.++.++.+||+.++++|+.++|.+|+.+|++.+. .. +.+++ .+|+|+++|.|++
T Consensus 2 ~T~~~~~e~~~L~~Al~~ik~i~~~VNe~vre~E~~~rL~eiq~~l~~~~~~~~~~~~~f~~~dL--~~R~Ll~eG~L~~ 79 (185)
T 2lg1_A 2 MTKDNEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKSGQMFAKEDL--KRKKLVRDGSVFL 79 (185)
T ss_dssp CSSTTTSCCTTSCCSSSSSTTTSGGGGGGHHHHHHHHHHHHHHHSSCSSCCEECTTSCEECHHHH--TTSCEEEEEEEEE
T ss_pred CCCCCcHhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccccccccccccccc--CCCceeeeceEEE
Confidence 799999999999999999999999999999999999999999999997520 01 11223 4699999999997
Q ss_pred EeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 620 VNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 620 ~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
.. .+.+.. ++|+|||||+||+|
T Consensus 80 k~--------~~~~~~----d~~~fLf~D~Ll~~ 101 (185)
T 2lg1_A 80 KN--------AAGRLK----EVQAVLLTDILVFL 101 (185)
T ss_dssp EC--------TTCCEE----EEEEEEESSEEECC
T ss_pred ec--------cCCCee----eEEEEeecCEEEEE
Confidence 74 111223 99999999999998
No 46
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.82 E-value=3.8e-09 Score=93.00 Aligned_cols=80 Identities=13% Similarity=0.202 Sum_probs=67.7
Q ss_pred ceEEEEecCCeEEEEEecCC-CceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCcc-EEEEEEcCChhhhhh
Q psy5772 137 AKLNLFLFTDLLVITKKKSN-GSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKT-VEIVLSCDTESESSL 214 (654)
Q Consensus 137 ~~~~~fLF~d~Ll~~k~~~~-~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~~l~a~s~~~k~~ 214 (654)
++||+|||+++||+|++... ..|.++..+|+..+.|++.++... .+|+|.+. |.. ..+++.|+|.+||++
T Consensus 45 ~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~~~--~~~aFeI~------g~~~~~i~v~~~s~eE~~~ 116 (132)
T 1v61_A 45 EERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEG--SDCMFEIT------GSTVERIVVHCNNNQDFQE 116 (132)
T ss_dssp CEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSS--SCCCEEEE------CSSSCEEEECCCCSHHHHH
T ss_pred eEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEecccccc--CccEEEEe------cCCCceEEEEeCCHHHHHH
Confidence 68889999999999997644 489999999999999998876543 46889887 333 669999999999999
Q ss_pred hhcccCcccc
Q psy5772 215 NVSNKSDKIL 224 (654)
Q Consensus 215 W~~~~~~~~~ 224 (654)
||.++++++.
T Consensus 117 Wl~~L~~~i~ 126 (132)
T 1v61_A 117 WMEQLNRLTK 126 (132)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988874
No 47
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=98.30 E-value=1.8e-05 Score=75.33 Aligned_cols=173 Identities=18% Similarity=0.241 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCCCCChhhhhhhcCCHHHHHHHHHHHHHHHHHHHhcCcccccHHHHHH
Q psy5772 391 EAKFELITSEASYFKSLTVLEKHFIASPLLDDVNILSKNDRKHLFGNVTAVRKCSERLLAALEQCWQDSILLTNICEIVY 470 (654)
Q Consensus 391 ~~i~ELi~TE~~Yv~~L~~l~~~f~~~~~l~~~~~l~~~~~~~lF~ni~~I~~~h~~fl~~Le~~~~~~~~~~~i~~if~ 470 (654)
..+..||+.|.+||.-|..+.+ |-. -+.+..++.++-+..+|..|+.++..|+.|...|.+...+ ..+|.-+.
T Consensus 190 slvesliqdecnyvgvltslse-fse--imtkkqilgpdvlkelfdhipvliqhhqkfisslqeakad----ekvgekln 262 (518)
T 4gou_A 190 SLVESLIQDECNYVGVLTSLSE-FSE--IMTKKQILGPDVLKELFDHIPVLIQHHQKFISSLQEAKAD----EKVGEKLN 262 (518)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHTTCSCHHHHHHHHTTHHHHHHHHHHHHHHHTSTTGG----GSHHHHHH
T ss_pred HHHHHHHHhhccceeehhhHHH-HHH--HHHhhhccChHHHHHHHhhchHHHHHHHHHHHHHHHhhhh----HHHHHhhc
Confidence 4678899999999998887765 444 4556889999999999999999999999999999876654 36888888
Q ss_pred HhcccchhhhHHHhhhcHHHHHHHHHHHHhcC-----------hhHHHHHHHHhcCCCCCCcCchhhhcccchhhccHHH
Q psy5772 471 QHVTNKSFNIYIKYCSNQFHIDRTLKSLRETN-----------PKFIEALTELESDPVCQSLSLHSFLMLPMQRVTRLPL 539 (654)
Q Consensus 471 ~~~~~~~~~~Y~~Y~~n~~~~~~~l~~~~~~~-----------~~f~~~l~~~~~~~~~~~l~L~s~Li~PvQRi~rY~l 539 (654)
.-.. |+-+|.-|..+.+.....+-..--.+ |-+.+|-++.... +.++...+|.-|--|+.-|+.
T Consensus 263 sglh--flvlyryylrhvpkniaklcsigmtdeievgrelyplpvieefdkqqkmt---kkmsvlqmlvypyfrvrtyqa 337 (518)
T 4gou_A 263 SGLH--FLVLYRYYLRHVPKNIAKLCSIGMTDEIEVGRELYPLPVIEEFDKQQKMT---KKMSVLQMLVYPYFRVRTYQA 337 (518)
T ss_dssp HHTG--GGGGGHHHHTTTTHHHHHHHHHHTSCGGGTTTTTCSHHHHHHHHHHHHHH---TSCCHHHHHHGGGGHHHHHHH
T ss_pred cCce--ehHHHHHHHHhccHHHHHHccCCCcchhhccccccCcchHHHHHHHHHHH---HHHHHHHHHhhhhheehhHHH
Confidence 8776 99999999999998877776554322 4555665544432 358889999999999999999
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q psy5772 540 LFDAILTRLRPNHSEYETCHTTLATLNKIVHECNEE 575 (654)
Q Consensus 540 LL~~llk~t~~~~~d~~~l~~al~~i~~l~~~~n~~ 575 (654)
.+++.+|.|..++.+...++-....+.-+-..+|..
T Consensus 338 yvddfikitkkdsqevkelevvhsqlaifqelinty 373 (518)
T 4gou_A 338 YVDDFIKITKKDSQEVKELEVVHSQLAIFQELINTY 373 (518)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999998888877766665555555543
No 48
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.66 E-value=3e-05 Score=66.61 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=28.2
Q ss_pred cCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeeccC
Q psy5772 606 SSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVAG 654 (654)
Q Consensus 606 ~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit~ 654 (654)
.++|+||++|+++.+.... .+ ..+ .+|+|||||+||+|+
T Consensus 3 ~pgR~lv~eG~l~el~~~~-----~k-~~~----~v~~FLfND~Ll~a~ 41 (113)
T 1zc3_B 3 TPGQYLVYNGDLVEYEADH-----MA-QLQ----RVHGFLMNDCLLVAT 41 (113)
T ss_dssp --CCCEEEEEEEEEEETTT-----CC-EEE----EEEEEEESSEEEEEE
T ss_pred CCCeEEEEeCcEEEEcccc-----CC-CCc----cEEEEecCCEEEEEE
Confidence 5899999999999985110 11 122 689999999999984
No 49
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.52 E-value=0.00016 Score=62.21 Aligned_cols=104 Identities=10% Similarity=-0.018 Sum_probs=70.5
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceE
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLI 187 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f 187 (654)
..+++|.|...... .+.++.++++|.++.|.+-+.... ......+++..+.+..+.........+.|
T Consensus 7 ~~~~~G~L~K~g~~-----------~~~Wk~R~fvL~~~~L~yy~~~~~--~~~~g~i~L~~~~v~~~~~~~~~~~~~~f 73 (118)
T 1v89_A 7 GPIKMGWLKKQRSI-----------VKNWQQRYFVLRAQQLYYYKDEED--TKPQGCMYLPGCTIKEIATNPEEAGKFVF 73 (118)
T ss_dssp CEEEEEEEEEECSS-----------SSCEEEEEEEEETTEEEEESSSSC--CSCSEEECSTTEEEEEECCCSSCCCCCEE
T ss_pred CCcEEEEEEecCCC-----------CCCccEEEEEEECCEEEEEeCCCC--CCceEEEECCCCEEEEcCcCcccCCcceE
Confidence 46888988765311 123577889999999999886543 23345567777777766543333345788
Q ss_pred EEEEeecCC--CccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 188 LLTILENHE--QKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 188 ~~~~~~~~~--~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
.+....... +....|.|+|.|++++..||..|+.++.
T Consensus 74 ~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 74 EIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 876532110 1345699999999999999999998874
No 50
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.49 E-value=0.00033 Score=60.21 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=69.6
Q ss_pred CCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCC
Q psy5772 105 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNK 184 (654)
Q Consensus 105 ~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 184 (654)
+....+++|.|...... ....++.++++|.++.|.+-+..... .....+++..+.|..+........+
T Consensus 7 p~~~~~~~G~L~K~~~~----------~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~ 74 (117)
T 2d9y_A 7 GNAPVTKAGWLFKQASS----------GVKQWNKRWFVLVDRCLFYYKDEKEE--SILGSIPLLSFRVAAVQPSDNISRK 74 (117)
T ss_dssp SSCCCCEEEEEEEECTT----------SSSCEEEEEEEEETTEEEEESSTTCC--SCCEEEECSSCEEEECCTTTTCCCS
T ss_pred CCCCeeEEEEEEEeCCC----------CCCCceEEEEEECCCEEEEECCCCCC--CcCCEEEeCCeEEEEcCccccCCCc
Confidence 44457889988655311 11235778899999999988754432 2345566777777665443333445
Q ss_pred ceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 185 YLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 185 ~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+.|.+.. ....+|.|+|.|++++..||..|+.++.
T Consensus 75 ~~F~i~~-----~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 75 HTFKAEH-----AGVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp SEEEEEC-----SSSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred cEEEEEc-----CCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 7787742 1235699999999999999999998874
No 51
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.42 E-value=0.0001 Score=64.73 Aligned_cols=43 Identities=28% Similarity=0.198 Sum_probs=30.7
Q ss_pred cccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 604 VISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 604 l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
|..|.|+||+.+.+..+.+.+ |.++ ++.+++|+|||||+||+|
T Consensus 6 L~~phRrlvc~~~l~ev~d~~------K~~~-kg~qqR~~FLFND~LL~T 48 (140)
T 3qwm_A 6 LSLPHRRLVCYCRLFEVPDPN------KPQK-LGLHQREIFLFNDLLVVT 48 (140)
T ss_dssp ----CCCEEEEEEEEECSCTT------SCCC-TTTTEEEEEEESSCEEEE
T ss_pred eccCCceEEEEEeeeeeccCc------cccc-ccccceEEEEecchhhhe
Confidence 566999999999999885222 2222 345699999999999998
No 52
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=97.19 E-value=0.00077 Score=58.94 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=70.5
Q ss_pred CCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCC
Q psy5772 105 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNK 184 (654)
Q Consensus 105 ~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 184 (654)
+....+++|.|...... ....++.++++|-++.|.+-+..... ..+..+++..+.|..+.........
T Consensus 17 ~~~~~~~~G~L~K~~~~----------~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~ 84 (128)
T 2dkp_A 17 PNAPVVRRGWLYKQDST----------GMKLWKKRWFVLSDLCLFYYRDEKEE--GILGSILLPSFQIALLTSEDHINRK 84 (128)
T ss_dssp TTSCCCEEEEEEEECCS----------SSCCEEEEEEEEETTEEEEESSTTCC--SEEEEECGGGSEEEECCGGGCCSSC
T ss_pred CCCCcEEEEEEEEeCCC----------CCCCceeEEEEEeCCEEEEECCCCCc--ccceEEEcCceEEEEcCCcccCCCC
Confidence 45567889999655321 11235778899999999998855432 3456667777777765433333345
Q ss_pred ceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 185 YLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 185 ~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+.|.+.... ...|.|+|.|++++..||.+|+.+..
T Consensus 85 ~~F~i~~~~-----~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 85 YAFKAAHPN-----MRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp SEEEEECSS-----SCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred eEEEEEcCC-----CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 777775321 24589999999999999999987774
No 53
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.001 Score=57.59 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=67.7
Q ss_pred cCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCC
Q psy5772 104 SSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTN 183 (654)
Q Consensus 104 ~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~ 183 (654)
.+....+++|.|....... .+.++.++++|-++.|.+-+..... .....+++..+.|..+........
T Consensus 17 ~~~~~~~~~G~L~K~~~~~----------~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~ 84 (122)
T 2yry_A 17 NPNAPVTKAGWLFKQASSG----------VKQWNKRWFVLVDRCLFYYKDEKEE--SILGSIPLLSFRVAAVQPSDNISR 84 (122)
T ss_dssp CTTCCEEEEEEEEEECCSS----------SCCEEEEEEEEETTEEEEESSTTCC--SCCEEEESTTCCCEECCTTCSCSS
T ss_pred CCCCCccEEEEEEEECCCC----------CCCcEEEEEEEeCCEEEEECCCCCC--CcccEEEcCCCEEEEcCccccCCc
Confidence 3455688999997653211 1235678899999999888754432 233445566655555543333334
Q ss_pred CceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 184 KYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 184 ~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
++.|.+.. .....|.|+|.|++++..||.+|+.++
T Consensus 85 ~~~F~i~~-----~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 85 KHTFKAEH-----AGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp SSEEEEEC-----SSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccEEEEec-----CCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 57777642 123569999999999999999998766
No 54
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=97.17 E-value=0.00046 Score=58.47 Aligned_cols=99 Identities=10% Similarity=0.051 Sum_probs=63.4
Q ss_pred ceEEeecceEEEecCccchhhhhcccccccceEEEEecCC--eEEEEEecCCCceEEEeeccccceEEEEccCCCC---C
Q psy5772 107 RWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD--LLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVP---P 181 (654)
Q Consensus 107 r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~---~ 181 (654)
+..+++|.|...... .+.++.++++|.++ .|.+-+.... ......+++....|..+..... .
T Consensus 5 ~~~~~~G~L~K~g~~-----------~~~Wk~R~fvL~~~~~~L~yyk~~~~--~~~~g~i~L~~~~v~~~~~~~~~~~~ 71 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHR-----------RKNWKVRKFILREDPAYLHYYDPAGA--EDPLGAIHLRGCVVTSVESNSNGRKS 71 (109)
T ss_dssp CCEEEEEEEEEECTT-----------TCCEEEEEEEEETTTTEEEEECTTSC--SSCSEEEECTTCEEEEECC-------
T ss_pred CceeEEEEEEEcCCC-----------CCCceEEEEEEeCCCcEEEEECCCCC--CCccEEEECCCCEEEEccCCcccccC
Confidence 457889998765221 12357788999998 7888765432 2234455666666666543311 1
Q ss_pred CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 182 TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 182 ~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
...+.|.+... ....|.|+|.|++++..||.+|+.++
T Consensus 72 ~~~~~F~i~~~-----~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 72 EEENLFEIITA-----DEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp -CCSEEEEECT-----TCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeC-----CCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 24577877632 12459999999999999999987654
No 55
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.06 E-value=0.0012 Score=57.31 Aligned_cols=104 Identities=11% Similarity=0.030 Sum_probs=68.2
Q ss_pred cCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCC
Q psy5772 104 SSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTN 183 (654)
Q Consensus 104 ~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~ 183 (654)
.|....+++|.|....... ...++.++++|-++.|.+-+..... .....+++..+.|...........
T Consensus 6 ~p~~~~~~~G~L~K~~~~~----------~~~WkkR~fvL~~~~L~yy~~~~~~--~~~g~i~l~~~~v~~~~~~~~~~~ 73 (123)
T 1upq_A 6 DPNLPVHIRGWLHKQDSSG----------LRLWKRRWFVLSGHCLFYYKDSREE--SVLGSVLLPSYNIRPDGPGAPRGR 73 (123)
T ss_dssp CTTSCEEEEEEEEEECSSS----------SCCEEEEEEEEETTEEEEESSTTCC--SCCEEEEGGGCEEEECCSSCTTSS
T ss_pred CCCCCceEEEEEEeeCCCC----------CCCceeEEEEEeCCEEEEECCCCCc--ccceEEECCCCEEEECCCCccCCC
Confidence 3445578999997653211 1235678899999999988754432 234455567777766543333333
Q ss_pred CceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 184 KYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 184 ~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
.+.|.+.. . ...+|.|+|.|++++..||..|+.++.
T Consensus 74 ~~~f~i~~--~---~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 74 RFTFTAEH--P---GMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp SSEEEEEC--T---TSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cEEEEEEC--C---CCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 46666542 1 124589999999999999999998873
No 56
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.03 E-value=0.0018 Score=59.90 Aligned_cols=104 Identities=11% Similarity=0.026 Sum_probs=66.5
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecC--CCceEEEeeccccceEEEEcc---CCCCCCC
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKS--NGSYSVIDYCTRAMMQMAAIE---DSVPPTN 183 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~--~~~~~~~~~~~~~~l~v~~~~---~~~~~~~ 183 (654)
.|++|-|.......+ ....+.++.|+++|-++.|.+-|... ......+..+++..+.+.+.. +......
T Consensus 3 vikeG~L~Kr~~~~~------~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~ 76 (169)
T 1btk_A 3 VILESIFLKRSQQKK------KTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPER 76 (169)
T ss_dssp CCEEEEEEEECCCSS------TTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGG
T ss_pred eEEEEEEEEecCCCC------CcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhc
Confidence 578888876532211 00112367888999999999999632 234567778888877644322 1111000
Q ss_pred C---------------------ceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 184 K---------------------YLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 184 ~---------------------~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
. +.|.+.. . . .+|.|+|.|++|+..||+.|+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~i~~~~~~~F~I~t--~--~--rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 77 QIPRRGEESSEMEQISIIERFPYPFQVVY--D--E--GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp CC---------CCTTHHHHCCCEEEEEEE--T--T--CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccccccCcccccccccccccccccEEEEe--C--C--ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 1 4565542 1 1 3588999999999999999998884
No 57
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.03 E-value=0.0013 Score=60.43 Aligned_cols=105 Identities=11% Similarity=0.110 Sum_probs=65.1
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEE-EccCCC---CCCC
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMA-AIEDSV---PPTN 183 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~-~~~~~~---~~~~ 183 (654)
..|++|-|...+...+ ....+.++.|+++|-++.|.+-|...... ..+..+++..+... .+.+.. ....
T Consensus 14 ~~i~EG~L~Kr~~~kk------~~~~knWKkRwFVL~~~~L~Yyk~~~~~~-~~~G~I~L~~~~~v~~~~~~~~~~~~~~ 86 (164)
T 2lul_A 14 NTILEEILIKRSQQKK------KTSPLNYKERLFVLTKSMLTYYEGRAEKK-YRKGFIDVSKIKCVEIVKNDDGVIPCQN 86 (164)
T ss_dssp SEEEEEEEEEECCCCS------SSCCCCEEEEEEEEESSEEEEECCCSSSC-CCCCEEEGGGCCEEEECCCCSSSCCSSS
T ss_pred CeeEEEEEEEecCCCC------CCCCCCceeEEEEEECCEEEEEeccCccc-ccccEEEEeeeEEEEeccccccCccccc
Confidence 4789999976643211 11123367888999999999987543221 22334445544332 322221 1223
Q ss_pred CceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccC
Q psy5772 184 KYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILN 225 (654)
Q Consensus 184 ~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~ 225 (654)
.+.|.+.. ...+|.|+|.|++|++.||+.|++++..
T Consensus 87 ~~~f~i~t------~~rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 87 KYPFQVVH------DANTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp CSEEEEEC------SSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ceeEEEec------CCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 45666542 2346999999999999999999988853
No 58
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.01 E-value=0.0015 Score=55.87 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=64.1
Q ss_pred ceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccce-EEEEccCCCCCCCCc
Q psy5772 107 RWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMM-QMAAIEDSVPPTNKY 185 (654)
Q Consensus 107 r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l-~v~~~~~~~~~~~~~ 185 (654)
...+++|.|..... ..+.++.++++|.++.|.+.+..... ..+..+++..+ .|....+.. ...+
T Consensus 6 ~~~~~~G~L~K~~~-----------~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~~v~~~~~~~--~~~~ 70 (115)
T 2dn6_A 6 SGVLKQGYMMKKGH-----------RRKNWTERWFVLKPNIISYYVSEDLK--DKKGDILLDENCCVESLPDKD--GKKC 70 (115)
T ss_dssp CSCSEEEEEEEECT-----------TSSCEEEEEEEECSSCEEEESSTTCS--SEEEEECCCTTCEEEEECCCT--TCCS
T ss_pred CCceEEEEEEecCC-----------CCCCcEEeEEEEECCEEEEeCCCCCc--ccCcEEEecCcEEEEECCCCC--CCee
Confidence 44678888865432 11235778899999999999855432 34555666643 444443222 2246
Q ss_pred eEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 186 LILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 186 ~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.|.+.. ...+|.|+|.|++++..||..|+.++
T Consensus 71 ~F~i~~------~~r~~~l~a~s~~e~~~Wi~ai~~~~ 102 (115)
T 2dn6_A 71 LFLVKC------FDKTFEISASDKKKKQEWIQAIHSTI 102 (115)
T ss_dssp EEEEEC------SSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEe------CCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 777752 23459999999999999999998777
No 59
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.95 E-value=0.0019 Score=55.37 Aligned_cols=98 Identities=7% Similarity=-0.067 Sum_probs=62.5
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEec--CCeEEEEEecCCCceEEEeeccccceEEEEccCC---C--CC
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLF--TDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDS---V--PP 181 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF--~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~---~--~~ 181 (654)
.+++|.|...... .+.++.++++|. ++.|.+-+..... ..+..+++..+.+....+. . ..
T Consensus 8 ~~~~G~L~K~g~~-----------~~~Wk~R~fvL~~~~~~L~yy~~~~~~--~~~g~i~L~~~~~v~~~~~~~~~~~~~ 74 (117)
T 1v5u_A 8 RSYEGILYKKGAF-----------MKPWKARWFVLDKTKHQLRYYDHRMDT--ECKGVIDLAEVEAVAPGTPTIGAPKTV 74 (117)
T ss_dssp SSEEEEEEECCCS-----------SSCCEEEEEEEETTTTEEEEESSSSCS--SCCCEEEGGGEEEEECCCCCTTSCSSS
T ss_pred ccEEEEEEecCCC-----------CCCceeeEEEEECCCCEEEEeecCCCC--ccceEEEccCcEEEeecCccccccccC
Confidence 4677877654211 123567889999 7888888755432 2344555666554443221 1 12
Q ss_pred CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccC
Q psy5772 182 TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILN 225 (654)
Q Consensus 182 ~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~ 225 (654)
...+.|.+.. ...+|.|+|.|++++..||..|+.++..
T Consensus 75 ~~~~~F~i~~------~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 75 DEKAFFDVKT------TRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp CTTTCEEEEE------SSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred CCCeEEEEEC------CCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 2346787742 2346999999999999999999988843
No 60
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=96.94 E-value=0.0012 Score=57.74 Aligned_cols=103 Identities=10% Similarity=0.043 Sum_probs=67.4
Q ss_pred cCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCC--eEEEEEecCCCceEEEeeccccceEEEEccCCCC-
Q psy5772 104 SSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD--LLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVP- 180 (654)
Q Consensus 104 ~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~- 180 (654)
+.....+++|.|..... ..+.++.++++|.++ +|.+-+.... ...+..+++..+.+..+.+...
T Consensus 13 ~~~~~~~~~G~L~K~g~-----------~~~~Wk~R~fvL~~~~~~L~yy~~~~~--~~~~g~i~L~~~~v~~~~~~~~~ 79 (129)
T 1x05_A 13 EFRGVIIKQGCLLKQGH-----------RRKNWKVRKFILREDPAYLHYYDPAGA--EDPLGAIHLRGCVVTSVESNSNG 79 (129)
T ss_dssp TTCSEEEEEEEEEECCS-----------SCCCCEEEEEEEEETTTEEEEECSSCC--SSCSEEEECTTCEEEECCCCCCS
T ss_pred cccCCceEEEEEEecCC-----------CCCCCeeEEEEEeCCCCEEEEECCCCC--CcceeEEEccCCEEEEccCCccc
Confidence 34556889999975421 112357788999987 7777764432 2334556677766666544321
Q ss_pred --CCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 181 --PTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 181 --~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
....+.|.+... ...+|.|+|.|++++..||.+|+.++.
T Consensus 80 ~~~~~~~~F~i~~~-----~~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 80 RKSEEENLFEIITA-----DEVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp SSCSSCSEEEEECT-----TCCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred cccCCCeEEEEEcC-----CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 124577877632 123489999999999999999988873
No 61
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.92 E-value=0.0008 Score=58.94 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=65.8
Q ss_pred ccCCceEEeecceEEEecCccchhhhhcccccccceEEEEecCC--eEEEEEecCCCceEEEeeccccceEEEEccCCC-
Q psy5772 103 ISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD--LLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSV- 179 (654)
Q Consensus 103 ~~~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~- 179 (654)
+...+..+++|.|...... ...++.++++|.+| .|.+.+.... ....+..+++....|..+.+..
T Consensus 12 ~~~~~~~~~~G~L~K~g~~-----------~~~Wk~R~fvL~~d~~~L~yy~~~~~-~~~~~g~i~L~~~~v~~~~~~~~ 79 (129)
T 1x1g_A 12 VELSGTVVKQGYLAKQGHK-----------RKNWKVRRFVLRKDPAFLHYYDPSKE-ENRPVGGFSLRGSLVSALEDNGV 79 (129)
T ss_dssp CTTCSEEEEEEEEEEECSS-----------SSSEEEEEEEEEESSCEEEEECSSSC-CSSCSCCEESTTCCCEECCSSSS
T ss_pred cccCCCEEEEEEEEEECCC-----------CCCeeeEEEEEeCCCCeEEEeCCCCc-CCccceEEECcCCEEEEeCCCCC
Confidence 4566789999999765321 22356788999954 6777664311 2233444556655555554431
Q ss_pred CCC-----CCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 180 PPT-----NKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 180 ~~~-----~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
+.. ..+.|.+... ....|.|+|.|++++..||.+|+.++
T Consensus 80 p~~~~~~~~~~~F~I~~~-----~~r~~~l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 80 PTGVKGNVQGNLFKVITK-----DDTHYYIQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp CSSCSSCCCSSCEEECCT-----TCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred cccccCCCCCceEEEEcC-----CCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 110 3467776531 12359999999999999999998877
No 62
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=96.91 E-value=0.00069 Score=55.77 Aligned_cols=76 Identities=7% Similarity=0.035 Sum_probs=50.4
Q ss_pred cceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhh
Q psy5772 136 YAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLN 215 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W 215 (654)
++.+++.|-++.|.+-+............+++....+... ...++.|.+.. ...+|.|+|.|++++..|
T Consensus 17 WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~-----~~~~~~F~i~~------~~r~~~l~A~s~~e~~~W 85 (94)
T 2rsg_A 17 WQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPH-----DFDECRFDISV------NDSVWYLRAQDPDHRQQW 85 (94)
T ss_dssp EEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEEC-----SSCSSEEEEEE------TTEEEEEECCSSCCTHHH
T ss_pred ceEEEEEEECCEEEEEEecccccccceeeEecceeeeecC-----cccceeEEEEe------CCeEEEEECCCHHHHHHH
Confidence 5778899999999988754432222233344444444331 22346777653 235799999999999999
Q ss_pred hcccCcc
Q psy5772 216 VSNKSDK 222 (654)
Q Consensus 216 ~~~~~~~ 222 (654)
|++|+.+
T Consensus 86 i~aLq~A 92 (94)
T 2rsg_A 86 IDAIEQH 92 (94)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998754
No 63
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=96.89 E-value=0.0017 Score=54.29 Aligned_cols=78 Identities=8% Similarity=0.007 Sum_probs=53.5
Q ss_pred cceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhh
Q psy5772 136 YAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLN 215 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W 215 (654)
++.++++|.++.|.+-+.........+..+++....|.... ..++.|.+.. . ...+|.|+|.|+++++.|
T Consensus 15 Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~-----~~~~~F~i~~----~-~~r~~~l~a~s~~e~~~W 84 (103)
T 3rcp_A 15 WQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHS-----ADNTRMELII----P-GEQHFYMKAVNAAERQRW 84 (103)
T ss_dssp EEEEEEEEETTEEEEESSCC---CCCSCEEEGGGCEEECCT-----TCSSEEEEEE----T-TTEEEEEECSSHHHHHHH
T ss_pred eeceEEEEECCEEEEEecCCcccCCcccEEEeeeeEEEEcC-----CCCceEEEEe----C-CCCEEEEECCCHHHHHHH
Confidence 56788999999999988654322223445556655554322 2357787753 1 135799999999999999
Q ss_pred hcccCccc
Q psy5772 216 VSNKSDKI 223 (654)
Q Consensus 216 ~~~~~~~~ 223 (654)
|.+|+.++
T Consensus 85 i~al~~a~ 92 (103)
T 3rcp_A 85 LVALGSSK 92 (103)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHHH
Confidence 99999877
No 64
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=96.88 E-value=0.00066 Score=59.19 Aligned_cols=100 Identities=10% Similarity=0.018 Sum_probs=65.5
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|...... .+.++.++++|-++.|.+-+.... ...+..+++..+.+..+.+. ...+.|.
T Consensus 5 ~~~~G~L~K~g~~-----------~~~Wk~R~fvL~~~~L~yy~~~~~--~~~~g~i~L~~~~v~~~~~~---~~~~~f~ 68 (127)
T 1fgy_A 5 PDREGWLLKLGGR-----------VKTWKRRWFILTDNCLYYFEYTTD--KEPRGIIPLENLSIREVLDP---RKPNCFE 68 (127)
T ss_dssp CSEEEEEEEECSS-----------SCCEEEEEEEEETTEEEEESSTTC--SSCSEEEECTTCEEEEECCS---SCSSEEE
T ss_pred CceEeEEEEECCC-----------CCCeEEEEEEEECCEEEEeCCCCC--CCcceEEECCceEEEEccCC---CCCceEE
Confidence 3667777654211 123577889999999999885433 22334556777776665432 3357887
Q ss_pred EEEeecC-----------C-----CccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 189 LTILENH-----------E-----QKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 189 ~~~~~~~-----------~-----~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+...... . +...+|.|+|.|++++..||..|+.++.
T Consensus 69 i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 69 LYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp EECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 7643221 0 1235799999999999999999988773
No 65
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.87 E-value=0.0032 Score=53.16 Aligned_cols=79 Identities=8% Similarity=-0.037 Sum_probs=53.1
Q ss_pred cceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhh
Q psy5772 136 YAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLN 215 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W 215 (654)
++.+++.|-++.|.+-+.... ...-...+.+....|....+ ...++.|.+.. . ...+|.|+|.|++++..|
T Consensus 22 Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l~~~~v~~~~~---~~~~~~F~i~~----~-~~r~~~l~A~s~~e~~~W 92 (107)
T 2cof_A 22 WKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSLVGCEVVPDPS---PDHLYSFRILH----K-GEELAKLEAKSSEEMGHW 92 (107)
T ss_dssp EEEEEEEECSSCEEEECSSTT-CSEEEEEECTTTCEEECCCB---TTBSCEEEEEE----T-TEEEEEEECSSHHHHHHH
T ss_pred cceEEEEEECCEEEEEeCCcc-cCCCeeEEeccceEEEECCC---CCCCeEEEEEe----C-CCeEEEEEcCCHHHHHHH
Confidence 467789999999988886544 22223334444444443222 22347787764 1 146699999999999999
Q ss_pred hcccCccc
Q psy5772 216 VSNKSDKI 223 (654)
Q Consensus 216 ~~~~~~~~ 223 (654)
|.+|+.+.
T Consensus 93 i~al~~~~ 100 (107)
T 2cof_A 93 LGLLLSES 100 (107)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 99998776
No 66
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=96.81 E-value=0.0017 Score=56.27 Aligned_cols=104 Identities=12% Similarity=0.002 Sum_probs=66.4
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCC-ceEEEeeccccceEEEEccCCCC------C
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNG-SYSVIDYCTRAMMQMAAIEDSVP------P 181 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~-~~~~~~~~~~~~l~v~~~~~~~~------~ 181 (654)
.+++|.|..... ..+.|+.++++|-.+.|.+-|..... .-.....+++..+.|..+.+.+. .
T Consensus 6 ~~k~G~L~Kk~~-----------~~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~ 74 (120)
T 4a6h_A 6 EIKSGFLERRSK-----------FLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNST 74 (120)
T ss_dssp CSEEEEEEEEET-----------TTTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC-------
T ss_pred ccEEEEEEEcCC-----------CCCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEccccccccccccc
Confidence 467777754421 11235778899999988888743211 12244566788888887654432 0
Q ss_pred CCCceEEEEEeecC-CCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 182 TNKYLILLTILENH-EQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 182 ~~~~~f~~~~~~~~-~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
..++.|.+...... -.+.+.|.|+|.|.++++.||.+|+.+.
T Consensus 75 ~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 75 GSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp --CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 13467777654421 0134689999999999999999998665
No 67
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=96.79 E-value=0.0012 Score=55.62 Aligned_cols=101 Identities=9% Similarity=-0.016 Sum_probs=64.7
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccC-CCCCCCCceE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIED-SVPPTNKYLI 187 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~f 187 (654)
.+++|.|.......+. ....++.++++|-++.|.+-+.... ......+++..+.+..... .......+.|
T Consensus 3 v~~~G~L~K~~~~~~~-------~~~~Wk~R~fvL~~~~L~yy~~~~~--~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F 73 (108)
T 1u5d_A 3 VIKQGYLEKKSKDHSF-------FGSEWQKRWCVVSRGLFYYYANEKS--KQPKGTFLIKGYSVRMAPHLRRDSKKESCF 73 (108)
T ss_dssp EEEEEEEEEEEECSSS-------SCEEEEEEEEEEETTEEEEESSTTC--SSCSEEEECTTCEEEECGGGCSSGGGGGEE
T ss_pred ccEEEEEEEcCCCCCc-------cccCceeeEEEEeCCEEEEecCCCC--CCCCEEEEecceEEEeCCccccccCCcceE
Confidence 6788888765422110 0123567889999999999885443 2233445667776665432 1122234778
Q ss_pred EEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 188 LLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 188 ~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+.... ..+|.|+|.|++++..||.+|+.++
T Consensus 74 ~i~~~~-----~r~~~l~a~s~~e~~~Wi~ai~~~i 104 (108)
T 1u5d_A 74 ELTSQD-----RRTYEFTATSPAEARDWVDQISFLL 104 (108)
T ss_dssp EEECSS-----SCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcCC-----CcEEEEECCCHHHHHHHHHHHHHHH
Confidence 776321 2458999999999999999988766
No 68
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.68 E-value=0.0028 Score=54.16 Aligned_cols=93 Identities=9% Similarity=-0.003 Sum_probs=61.1
Q ss_pred ceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceE-EEEccCCCCCCCCc
Q psy5772 107 RWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQ-MAAIEDSVPPTNKY 185 (654)
Q Consensus 107 r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~-v~~~~~~~~~~~~~ 185 (654)
...+++|.|...... ....++.++++|.++.|.+.+..... ..+..+++..+. |.... .+
T Consensus 6 ~~~~~~G~L~K~~~~----------~~~~WkkR~fvL~~~~L~yy~~~~~~--~~~g~i~l~~~~~v~~~~-------~~ 66 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQ----------GKRMFQKRWVKFDGLSISYYNNEKEM--YSKGIIPLSAISTVRVQG-------DN 66 (115)
T ss_dssp SCCCEEEEEEECCSS----------SSSCCEEEEEEECSSEEEEEESSCCS--SCCCEEETTTEEEEEEET-------TT
T ss_pred CCccEEEEEEEcCCC----------CCCCCceEEEEEECCEEEEEcCCCCc--ccCCEEECCcceEEEeCC-------CC
Confidence 346788888644210 11235778899999999999865432 233445555543 33211 47
Q ss_pred eEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 186 LILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 186 ~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
.|.+.. . ..+|.|+|.|++++..||..|+.++.
T Consensus 67 ~F~i~~--~----~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 67 KFEVVT--T----QRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp EEEEEE--S----SCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEe--C----CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 888762 1 24599999999999999999998873
No 69
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=96.65 E-value=0.0006 Score=59.31 Aligned_cols=101 Identities=9% Similarity=0.033 Sum_probs=62.8
Q ss_pred CCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceE-EEEccCCCCCCC
Q psy5772 105 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQ-MAAIEDSVPPTN 183 (654)
Q Consensus 105 ~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~-v~~~~~~~~~~~ 183 (654)
+....+++|.|..... ..+.++.++++|.++.|.+-+..... ..+..+++..+. |..+........
T Consensus 10 ~~~~~~~~G~L~K~g~-----------~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~l~~~~~v~~~~~~~~~~~ 76 (125)
T 1eaz_A 10 QDSAVIKAGYCVKQGA-----------VMKNWKRRYFQLDENTIGYFKSELEK--EPLRVIPLKEVHKVQECKQSDIMMR 76 (125)
T ss_dssp --CCCSEEEEEEEECT-----------TTCCEEEEEEEECSSEEEEESSTTCS--SCSEEEEGGGCCEEEECTTHHHHTC
T ss_pred CCCCccEEEEEEEeCC-----------CCCCcceEEEEEeCCEEEEEcCCCCC--cceeEEEcccceEEeeccccccCCc
Confidence 3445688888865421 11235678899999999998755432 222334444432 333221111223
Q ss_pred CceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 184 KYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 184 ~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
.+.|.+.. ....|.|+|.|++++..||..|+.++.
T Consensus 77 ~~~F~i~~------~~r~~~l~a~s~~e~~~W~~al~~~i~ 111 (125)
T 1eaz_A 77 DNLFEIVT------TSRTFYVQADSPEEMHSWIKAVSGAIV 111 (125)
T ss_dssp SSEEEEEC------SSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEe------CCcEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 57787762 234699999999999999999998884
No 70
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=96.59 E-value=0.0038 Score=56.12 Aligned_cols=105 Identities=5% Similarity=-0.065 Sum_probs=68.2
Q ss_pred CceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCC-CCCCC
Q psy5772 106 SRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSV-PPTNK 184 (654)
Q Consensus 106 ~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~ 184 (654)
.+..+++|.|.......+. ..+.++.++++|-++.|.+-+.... ...+..+++..+.+....... .....
T Consensus 14 ~~~~~~~G~L~K~g~~~~~-------~~k~WkkR~fvL~~~~L~yyk~~~~--~~~~g~i~L~~~~v~~~~~~~~~~~~~ 84 (148)
T 1u5f_A 14 LPFVIKAGYLEKRRKDHSF-------LGFEWQKRWCALSKTVFYYYGSDKD--KQQKGEFAIDGYDVRMNNTLRKDGKKD 84 (148)
T ss_dssp CSSEEEEEEEEEECCCSSC-------SSCSEEEEEEEEETTEEEEESSTTC--SSCSEEEECTTCEEEECTTSCSSTTGG
T ss_pred CCCccEEEEEEEeCCCCCC-------cCCCceeEEEEEECCEEEEEcCCCC--cccceEEEcCCcEEEECCCcccCCCCc
Confidence 3567899999766432110 0123577889999999988875443 223445566766666543211 22224
Q ss_pred ceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 185 YLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 185 ~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+.|.+... ...+|.|+|.|++++..||..|+.++.
T Consensus 85 ~~F~I~~~-----~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 85 CCFEICAP-----DKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp GEEEEECT-----TSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred cEEEEECC-----CCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 67777531 124699999999999999999998873
No 71
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.53 E-value=0.0018 Score=55.16 Aligned_cols=96 Identities=15% Similarity=0.077 Sum_probs=61.5
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|..... ....++.++++|.++.|.+-+.... ......+++..+.+..... ......+.|.
T Consensus 5 ~~~~G~L~K~g~-----------~~~~Wk~R~fvL~~~~L~yy~~~~~--~~~~g~i~L~~~~~~~~~~-~~~~~~~~F~ 70 (113)
T 1pls_A 5 RIREGYLVKKGS-----------VFNTWKPMWVVLLEDGIEFYKKKSD--NSPKGMIPLKGSTLTSPCQ-DFGKRMFVFK 70 (113)
T ss_dssp CSEEEEEEEESS-----------SSSCCEEEEEEEETTEEEEESSTTC--SSCSEEEESSSCCEESSCC-SSCCSSSEEE
T ss_pred CcEEEEEEEeCC-----------CCCCceEEEEEEECCEEEEEeCCCC--CCcceEEEcCCCEEEEecC-CCCCCccEEE
Confidence 466777754421 1123577889999999998885532 2223444555555543111 1122356787
Q ss_pred EEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 189 LTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 189 ~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
+.. ....+|.|+|.|++++..||..|+.++
T Consensus 71 i~~-----~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 100 (113)
T 1pls_A 71 ITT-----TKQQDHFFQAAFLEERDAWVRDINKAI 100 (113)
T ss_dssp EEE-----TTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEc-----CCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 753 123679999999999999999999877
No 72
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.50 E-value=0.0047 Score=52.18 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=63.0
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|..... ..+.++.+++.|-+..|.+-+..... .....+++..+.+....+.. ...+.|.
T Consensus 8 ~~~~G~L~K~~~-----------~~~~Wk~RwfvL~~~~L~yyk~~~~~--~~~~~i~L~~~~~~~~~~~~--~~~~~F~ 72 (109)
T 1wgq_A 8 STMSGYLYRSKG-----------SKKPWKHLWFVIKNKVLYTYAASEDV--AALESQPLLGFTVTLVKDEN--SESKVFQ 72 (109)
T ss_dssp CSCEEEEEEESS-----------TTSCCEEEEEEEETTEEEEESCTTCS--SCSEEEECSSEEEEECCCSS--CSSSEEE
T ss_pred CeEEEEEEeCCC-----------CCCCceeEEEEEeCCEEEEECCCCcC--ccCceEECCCCEEEECCCCC--CCCcEEE
Confidence 356787764421 11235678899999888888755432 22345566666666544322 2247888
Q ss_pred EEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 189 LTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 189 ~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+.. ....+|.|+|.|++++..||..|+.+..
T Consensus 73 i~~-----~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 73 LLH-----KGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEE-----TTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEe-----CCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 753 1235699999999999999999998774
No 73
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=96.50 E-value=0.0015 Score=56.86 Aligned_cols=96 Identities=10% Similarity=-0.027 Sum_probs=62.7
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|..... ..+.++.++++|.++.|.+-+..... .....+++..+.+..... .....+.|.
T Consensus 18 ~~~~G~L~K~g~-----------~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~~v~~~~--~~~~~~~F~ 82 (126)
T 1fao_A 18 GTKEGYLTKQGG-----------LVKTWKTRWFTLHRNELKYFKDQMSP--EPIRILDLTECSAVQFDY--SQERVNCFC 82 (126)
T ss_dssp TCEEEEEEEECS-----------SSCCEEEEEEEEETTEEEEESSTTCS--SCSEEEEGGGCCEEEEEC--SSSSSSEEE
T ss_pred ccEEEEEEEcCC-----------CCCCcccEEEEEECCEEEEeCCCCCC--CceeEEEccceEEEEecc--cCCCCCEEE
Confidence 577888865431 11235678899999999998855432 223444555554332221 122347888
Q ss_pred EEEeecCCCccEEEEEEcCChhhhhhhhcccCccccC
Q psy5772 189 LTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILN 225 (654)
Q Consensus 189 ~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~ 225 (654)
+.. ...+|.|+|.|++++..||..|+.++..
T Consensus 83 i~~------~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 83 LVF------PFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp EEE------TTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEe------CCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 763 2357999999999999999999988843
No 74
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.39 E-value=0.0049 Score=55.50 Aligned_cols=95 Identities=13% Similarity=-0.021 Sum_probs=62.6
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|...... .+.++.+++.|=++.|.+-|...... ....+++..+.+....... ....+.|.
T Consensus 18 v~keG~L~Kkg~~-----------~k~WkrRWFvLk~~~L~Yyk~~~d~~--~~g~I~L~~~~~~~~~~~~-~~~~~~F~ 83 (149)
T 1x1f_A 18 LYFEGFLLIKRSG-----------YREYEHYWTELRGTTLFFYTDKKSII--YVDKLDIVDLTCLTEQNST-EKNCAKFT 83 (149)
T ss_dssp EEEEEEEEEECTT-----------CCSCEEEEEEEETTEEEEESCSSCSS--CSEECCCSSCCEEEECCCT-TSCCCEEE
T ss_pred ccEEEEEEEeCCC-----------CCCceeEEEEEcCCEEEEEeCCCccc--cCcEEECCCceEEeeccCC-CCcCcEEE
Confidence 7889988655311 12357788999999999988654432 2345566655444222111 12246787
Q ss_pred EEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 189 LTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 189 ~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
+... ..+|.|+|.|++++..||.+|+.++
T Consensus 84 I~t~------~r~~~f~A~s~ee~~eWi~aI~~v~ 112 (149)
T 1x1f_A 84 LVLP------KEEVQLKTENTESGEEWRGFILTVT 112 (149)
T ss_dssp EECS------SCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEcC------CCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 7532 2458999999999999999998776
No 75
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=96.35 E-value=0.0034 Score=55.09 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=64.9
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCC---------CceEEEeeccccceEEEEccCC
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSN---------GSYSVIDYCTRAMMQMAAIEDS 178 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~---------~~~~~~~~~~~~~l~v~~~~~~ 178 (654)
..+++|.|.......+ +++.. +.++.+++.|=++.|.+-|.... ........+++....+....
T Consensus 11 ~~~k~G~L~kk~~~~~---G~~~~--k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~-- 83 (129)
T 2p0d_A 11 EVEKSGLLNMTKIAQG---GRKLR--KNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGR-- 83 (129)
T ss_dssp SEEEEEEEEEEEEEET---TEECC--CCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECT--
T ss_pred ceeEEEEEEEeeeccC---CCcCC--CCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECC--
Confidence 4788999965311001 11111 34677889999999999986531 11122334456666655432
Q ss_pred CCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 179 VPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 179 ~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+....++.|.+... ...+|.|+|.|+++.+.||.+|+.+|.
T Consensus 84 ~~~kr~~~F~l~t~-----~~~~yl~qA~s~~e~~~Wi~aI~~~i~ 124 (129)
T 2p0d_A 84 HLSSRRNVLHIRTI-----PGHEFLLQSDHETELRAWHRALRTVIE 124 (129)
T ss_dssp TSCSSSSEEEEECT-----TSCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEcC-----CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 22234588887632 124699999999999999999988774
No 76
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=96.22 E-value=0.0027 Score=55.19 Aligned_cols=101 Identities=10% Similarity=0.049 Sum_probs=60.0
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCC-eEEEEEecCCCceEEEeeccccceEEEEccC-CCCCCCCc
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD-LLVITKKKSNGSYSVIDYCTRAMMQMAAIED-SVPPTNKY 185 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d-~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~ 185 (654)
..+++|.|..... ..+.++.++++|-+| .|.+-+...... .+..+++..+.+..+.. .......+
T Consensus 7 ~~~~~G~L~K~g~-----------~~k~WkkRwfvL~~~~~L~yy~~~~~~~--~~g~i~L~~~~~~~~~~~~~~~~~~~ 73 (125)
T 1unq_A 7 AIVKEGWLHKRGE-----------YIKTWRPRYFLLKNDGTFIGYKERPQDV--DQREAPLNNFSVAQCQLMKTERPRPN 73 (125)
T ss_dssp CEEEEEEEEEECS-----------SSCCEEEEEEEEETTSEEEEESSCCCSH--HHHTSCSEEEECTTCEEEEECSSSTT
T ss_pred CeeEEeeEEeccC-----------CccCccCcEEEEecCCEEEEEeCCCCCC--CCceeEccceeEEeeeecccccCCCC
Confidence 3678888865421 112356788999865 777777543321 22233444443321100 01122347
Q ss_pred eEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 186 LILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 186 ~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.|.+..... +...+|.|+|.|++++..||.+|+.++
T Consensus 74 ~F~I~~~~~--~~~~~~~~~a~s~~e~~~Wi~al~~~~ 109 (125)
T 1unq_A 74 TFIIRCLQW--TTVIERTFHVETPEEREEWTTAIQTVA 109 (125)
T ss_dssp EEEEEEEET--TEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEecCC--CCceeEEEEeCCHHHHHHHHHHHHHHH
Confidence 888764332 234679999999999999999998777
No 77
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=96.21 E-value=0.014 Score=49.91 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=69.5
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.++.|.|..... +. .|. .++.++++|=.++|.+-|...+. .....+++..+.|.+++.+.. ..+++|.
T Consensus 12 VirkGWL~k~~~--g~---~k~----~wk~rWFVLt~~~L~yyKd~~ek--e~~G~IpL~~~~vr~v~~~~~-~rk~~F~ 79 (125)
T 1dyn_A 12 VIRKGWLTINNI--GI---MKG----GSKEYWFVLTAENLSWYKDDEEK--EKKYMLSVDNLKLRDVEKGFM-SSKHIFA 79 (125)
T ss_dssp EEEEEEEEESCC--CG---GGT----SSEEEEEEEESSEEEEESSTTCS--CEEEEEECTTEEEEECCSCSS-SSCEEEE
T ss_pred eEEEEEEEEecC--cc---ccC----CceeeEEEEeccceeeecCCccc--ccceEEECCCceEeccCCCCC-CCceEEE
Confidence 578888865321 11 111 12566788999999999865432 334567899999999886633 4578888
Q ss_pred EEEeecC--CCccEEEEEEcCChhhhhhhhcccCcc
Q psy5772 189 LTILENH--EQKTVEIVLSCDTESESSLNVSNKSDK 222 (654)
Q Consensus 189 ~~~~~~~--~~~~~~~~l~a~s~~~k~~W~~~~~~~ 222 (654)
+...++. .+...+|.|.|.|.+++..|++.|.++
T Consensus 80 l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 80 LFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp EEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred EECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 8764321 122356999999999999999998544
No 78
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.20 E-value=0.028 Score=49.11 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=58.4
Q ss_pred ceEEeecceEEEecCccchhhhhcccccccceEEEEec-CCeEEEEEecCCCceEEEeeccc--cceEEEE------ccC
Q psy5772 107 RWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLF-TDLLVITKKKSNGSYSVIDYCTR--AMMQMAA------IED 177 (654)
Q Consensus 107 r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF-~d~Ll~~k~~~~~~~~~~~~~~~--~~l~v~~------~~~ 177 (654)
...+++|.|..... ..+.++.+++.|. +..|.+-|....... ...+.+ ....+.. +..
T Consensus 6 ~~v~~~G~L~K~g~-----------~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~--~g~i~l~~~~~~i~~~~~~~~v~~ 72 (130)
T 2d9v_A 6 SGLVRGGWLWRQSS-----------ILRRWKRNWFALWLDGTLGYYHDETAQDE--EDRVVIHFNVRDIKVGQECQDVQP 72 (130)
T ss_dssp CCEEEEEEEEEECS-----------SSCCEEEEEEEEETTTEEEEESSSSTTSE--EEEEECTTTEEEEEEGGGCSSCCC
T ss_pred CceeEEEEEEeecC-----------ccCCceeeEEEEccCCEEEEEeCCCCCCc--CceEecccceeEEeccccccccCC
Confidence 44788898875521 1123567778885 777777775443221 222222 2222321 111
Q ss_pred CCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 178 SVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 178 ~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+....++.|.+... .+ .+|.|+|.|+++++.||.+|+.++
T Consensus 73 ~~~~~~~~~F~I~~~---~~--r~~~l~A~s~~e~~~Wi~al~~a~ 113 (130)
T 2d9v_A 73 PEGRSRDGLLTVNLR---EG--SRLHLCAETRDDAIAWKTALMEAN 113 (130)
T ss_dssp CSSCCTTTEEEEEET---TS--CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCCcCcEEEEEeC---CC--CEEEEEcCCHHHHHHHHHHHHHHH
Confidence 112223578887642 22 369999999999999999999877
No 79
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.02 E-value=0.011 Score=51.57 Aligned_cols=100 Identities=6% Similarity=0.061 Sum_probs=55.8
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEec--CCeEEEE-EecC--CCceEEEeeccccc-eEEEEccCCCCCC
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLF--TDLLVIT-KKKS--NGSYSVIDYCTRAM-MQMAAIEDSVPPT 182 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF--~d~Ll~~-k~~~--~~~~~~~~~~~~~~-l~v~~~~~~~~~~ 182 (654)
..++|-|....+.. .+.++.|++.|= .+.+++- |... ...-.....+++.. ..|..........
T Consensus 15 ~~~~G~L~K~g~~~----------~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~ 84 (126)
T 1v5p_A 15 NRICGFLDIEDNEN----------SGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPK 84 (126)
T ss_dssp CCEECCEEEECTTC----------SSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCS
T ss_pred CceEEEEEEeCCCC----------CCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCC
Confidence 34578886553211 122456666664 1555544 4310 11123345555555 3455443222223
Q ss_pred CCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 183 NKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 183 ~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
.+++|.+. ....+|.|+|.|+++...||..|+.++.
T Consensus 85 ~~~~F~i~------t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 85 TPFCFVIN------ALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp CSSEEEEE------CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEE------CCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 35677543 2235699999999999999999987773
No 80
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=95.98 E-value=0.01 Score=51.45 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=58.6
Q ss_pred cccceEEEEecCCeEEEEEecCC---C--ce--EEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEc
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKSN---G--SY--SVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSC 206 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~~---~--~~--~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a 206 (654)
+.++.+++.|-++.|+|-+.+.- + .| .....+++....|+..+ .+..++.|.+.... .| .+|.|+|
T Consensus 22 ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e---~~~~~~~F~L~~~~--~G--~~Y~fqA 94 (126)
T 2dtc_A 22 SSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPD---DPEHPDIFQLNNPD--KG--NVYKFQT 94 (126)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCC---CTTSTTEEEEECTT--SC--SEEEEEC
T ss_pred cCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecC---CCCCCCEEEEeeCC--CC--CEEEEeC
Confidence 34677889999999999996631 1 11 11234567777776332 23346889986321 23 5699999
Q ss_pred CChhhhhhhhcccCcccc
Q psy5772 207 DTESESSLNVSNKSDKIL 224 (654)
Q Consensus 207 ~s~~~k~~W~~~~~~~~~ 224 (654)
.|.++...|+.+|+.++.
T Consensus 95 ~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 95 GSRFHAILWHKHLDDACK 112 (126)
T ss_dssp SSHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999998883
No 81
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.97 E-value=0.012 Score=50.80 Aligned_cols=80 Identities=9% Similarity=0.029 Sum_probs=52.9
Q ss_pred cceEEEEecCCeEEEEE----ecCCCceEEEeeccccceEEEEccCCC-CCCCCceEEEEEeecCCCccEEEEEEcCChh
Q psy5772 136 YAKLNLFLFTDLLVITK----KKSNGSYSVIDYCTRAMMQMAAIEDSV-PPTNKYLILLTILENHEQKTVEIVLSCDTES 210 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k----~~~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~ 210 (654)
++.|+++|=+++|-+-| .+. .-.....+++....|..++... ....++.|.+. ..|+ +|.|+|+|++
T Consensus 25 WKrRwFVL~~~~LyYfk~~~~~~~--~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v----~~~~--ty~~~Adsee 96 (126)
T 1wi1_A 25 WKKRFFVLVQVSQYTFAMCSYREK--KAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAV----KEGD--TVIFASDDEQ 96 (126)
T ss_dssp CEEEEEEEEEEETTEEEEEECCSS--SSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEE----CSSC--EEEEECSSHH
T ss_pred cceEEEEEeCCEEEEEEccccccc--CCCCceEEECCCcEEEEecCCcccccCceEEEEe----cCCc--eEEEEcCCHH
Confidence 45667888888877776 332 2223455567777776553222 12345667643 2343 5999999999
Q ss_pred hhhhhhcccCccc
Q psy5772 211 ESSLNVSNKSDKI 223 (654)
Q Consensus 211 ~k~~W~~~~~~~~ 223 (654)
++..||.+|++++
T Consensus 97 e~~~WikAi~~A~ 109 (126)
T 1wi1_A 97 DRILWVQAMYRAT 109 (126)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999888
No 82
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=95.95 E-value=0.0037 Score=54.42 Aligned_cols=101 Identities=5% Similarity=-0.018 Sum_probs=63.8
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCC---c----eEEEeeccccceEEEEccCCCCC
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNG---S----YSVIDYCTRAMMQMAAIEDSVPP 181 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~---~----~~~~~~~~~~~l~v~~~~~~~~~ 181 (654)
.+++|.|...... .+.++.+++.|=++.|.+-+..... . -..+..+++..+.|..+.+ ...
T Consensus 12 ~~k~G~L~K~g~~-----------~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~-~~~ 79 (124)
T 2w2x_D 12 HKQQGELYMWDSI-----------DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQ-GKN 79 (124)
T ss_dssp -CCEEEEEEEETT-----------TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTT-CBT
T ss_pred cceeEEEEEECCC-----------CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccC-CcC
Confidence 5677777654311 1235778899999999888853210 0 1124556677777776543 122
Q ss_pred CCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 182 TNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 182 ~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
...+.|.+.....+ ...|.|.|+|++++..||.+|+.++.
T Consensus 80 ~k~~~F~I~~~~~~---~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 80 QKSFVFILEPKQQG---DPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp TBSEEEEEEECC-----CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEECCCCC---CceEEEEECCHHHHHHHHHHHHHHHH
Confidence 23467776543221 23489999999999999999987773
No 83
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.94 E-value=0.0024 Score=55.18 Aligned_cols=78 Identities=10% Similarity=-0.058 Sum_probs=50.6
Q ss_pred cceEEEEecC--CeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhh
Q psy5772 136 YAKLNLFLFT--DLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESS 213 (654)
Q Consensus 136 ~~~~~~fLF~--d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~ 213 (654)
++.++++|-. ..|.+-+.........+..+++..+.|... ....+.|.+.... ..+|.|+|.|++++.
T Consensus 24 Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~-----~~~~~~F~i~~~~-----~r~~~l~a~s~~e~~ 93 (120)
T 2d9x_A 24 WQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPS-----DEDSHTFTVNAAS-----GEQYKLRATDAKERQ 93 (120)
T ss_dssp EEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECC-----SSSSSCEEECCSS-----SCCEEECCSSHHHHH
T ss_pred ceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEec-----CCCCCEEEEEcCC-----CCEEEEECCCHHHHH
Confidence 5677899983 577777654432223444555555544331 1234777765321 245999999999999
Q ss_pred hhhcccCccc
Q psy5772 214 LNVSNKSDKI 223 (654)
Q Consensus 214 ~W~~~~~~~~ 223 (654)
.||.+|+.++
T Consensus 94 ~Wi~al~~~~ 103 (120)
T 2d9x_A 94 HWVSRLQICT 103 (120)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998777
No 84
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.91 E-value=0.0063 Score=54.70 Aligned_cols=105 Identities=10% Similarity=0.071 Sum_probs=66.3
Q ss_pred CCceEEeecceEEEecCccchhhhhcccccccceEEEEecCC-----eEEEEEecCCCceEEEeeccccceEEEEccCCC
Q psy5772 105 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD-----LLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSV 179 (654)
Q Consensus 105 ~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d-----~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~ 179 (654)
+....+++|.|......+..... .+.++.++++|-++ .|.+-+..... ...+..+++..+.+.....
T Consensus 14 ~~~~~~~~G~L~K~~~~~~~~~~-----~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~-~~~~g~I~L~~~~~~~~~~-- 85 (150)
T 1wg7_A 14 QKGGITKHGWLYKGNMNSAISVT-----MRSFKRRFFHLIQLGDGSYNLNFYKDEKIS-KEPKGSIFLDSCMGVVQNN-- 85 (150)
T ss_dssp CSCCCCCEEEEEECCCCSSHHHH-----HSSCEEEEEEEEECSSSCEEEEEESSSCCS-SCCSEEECTTTCCEECCCC--
T ss_pred CCCCeeEEEEEEEecCCcccccc-----ccCeeEEEEEEecCCCCceEEEEECCCCCC-CCcCcEEecccCEEEecCC--
Confidence 34567889999766432211011 12356778999987 88887754421 2234455666655554321
Q ss_pred CCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 180 PPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 180 ~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
....+.|.+.... ...|.|+|.|++++..||..|+.++
T Consensus 86 -~~~~~~F~i~~~~-----~r~~~l~A~s~~e~~~Wi~al~~ai 123 (150)
T 1wg7_A 86 -KVRRFAFELKMQD-----KSSYLLAADSEVEMEEWITILNKIL 123 (150)
T ss_dssp -SSCTTEEEEECSS-----SCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCCceEEEEEeCC-----CcEEEEEeCCHHHHHHHHHHHHHHH
Confidence 2345788876422 2469999999999999999998877
No 85
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=95.91 E-value=0.0087 Score=54.97 Aligned_cols=82 Identities=11% Similarity=0.096 Sum_probs=49.9
Q ss_pred cccceEEEEecCCeEEEEEecCCCceEEEeeccccc--eEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhh
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAM--MQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESE 211 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~--l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~ 211 (654)
+.++.++++|-++.|.+-+......-.....+++.. ..+ ++.. ......+.|.+... + .+|.|+|.|+++
T Consensus 27 k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~-~~~~-~~~~~~~~F~I~t~----~--r~~~l~A~s~~e 98 (168)
T 2j59_M 27 RPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLI-DISY-SETKRKNVFRLTTS----D--CECLFQAEDRDD 98 (168)
T ss_dssp -CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEE-EECS-SSCSCSSEEEEECS----S--CEEEEECSSHHH
T ss_pred CCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEE-Eecc-ccCCCCCEEEEEeC----C--ceEEEEcCCHHH
Confidence 346788899999999988865432222233333333 122 2221 12233578887632 2 469999999999
Q ss_pred hhhhhcccCccc
Q psy5772 212 SSLNVSNKSDKI 223 (654)
Q Consensus 212 k~~W~~~~~~~~ 223 (654)
...||..|+.++
T Consensus 99 ~~~Wi~ai~~~~ 110 (168)
T 2j59_M 99 MLAWIKTIQESS 110 (168)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999999998777
No 86
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.87 E-value=0.0059 Score=53.63 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=60.9
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceE
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLI 187 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f 187 (654)
..+++|.|.... ..+.++.+++.|=+++|.+-|.... ......+++....|... .....++.|
T Consensus 7 ~v~k~GwL~K~g------------~~k~WkrRWfVLk~~~L~yyk~~~~--~~p~G~I~L~~~~v~~~---~~~~~~~~F 69 (130)
T 1v88_A 7 GIVMADWLKIRG------------TLKSWTKLWCVLKPGVLLIYKTQKN--GQWVGTVLLNACEIIER---PSKKDGFCF 69 (130)
T ss_dssp SCCEEEEEEECC------------SSSSCEEEEEEEETTEEEEESCSSS--CCCCEEEECSSCEECCC---CTTTSSCEE
T ss_pred ceEEEeEEEEeC------------CCCCceEEEEEEECCEEEEECCCCC--CCceEEEEcCCCEEEEC---CCCCCCeEE
Confidence 357788885421 1123577889998888888875543 22344455666655322 112234677
Q ss_pred EEEEeecC--------CCc----------cEEEEEEcCChhhhhhhhcccCccc
Q psy5772 188 LLTILENH--------EQK----------TVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 188 ~~~~~~~~--------~~~----------~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+...... .|. ...|.|+|.|+++++.||.+|+.++
T Consensus 70 ~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~ 123 (130)
T 1v88_A 70 KLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL 123 (130)
T ss_dssp EEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 76532210 010 1238999999999999999999887
No 87
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=95.71 E-value=0.016 Score=49.29 Aligned_cols=82 Identities=9% Similarity=0.041 Sum_probs=51.7
Q ss_pred ccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhh
Q psy5772 135 FYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSL 214 (654)
Q Consensus 135 ~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~ 214 (654)
.++.+++.|=++.|.+-|...... ....+++....+..+...+....+|.|.+.+... .+|.|+|.|+++.+.
T Consensus 19 ~Wk~rwfvL~~~~L~~yk~~~~~~--p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~-----~~y~f~A~s~ee~~~ 91 (112)
T 3cxb_B 19 HWKTCFVVLSNGILYQYPDRTDVI--PLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDR-----PCLELSAESEAEMAE 91 (112)
T ss_dssp CCEEEEEEEETTEEEEESSSSCCS--CSEEEETTC-CEEEEEECCCSSCTTEEEEEETTS-----CCEEEECSSHHHHHH
T ss_pred CceEEEEEEECCEEEEECCCCCCC--ccceEEecCCEEEeeeccCCCCCCeEEEEEcCCC-----CEEEEEcCCHHHHHH
Confidence 457788999999988888553321 1122333322222111122233468999875332 259999999999999
Q ss_pred hhcccCccc
Q psy5772 215 NVSNKSDKI 223 (654)
Q Consensus 215 W~~~~~~~~ 223 (654)
||..|+.++
T Consensus 92 Wi~ai~~~~ 100 (112)
T 3cxb_B 92 WMQHLCQAV 100 (112)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998777
No 88
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=95.68 E-value=0.016 Score=49.06 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=47.6
Q ss_pred cceEEEEec-CCeEEEEEecCCCceEEEeeccccc--eEEEE---ccC--CCCCCC-CceEEEEEeecCCCccEEEEEEc
Q psy5772 136 YAKLNLFLF-TDLLVITKKKSNGSYSVIDYCTRAM--MQMAA---IED--SVPPTN-KYLILLTILENHEQKTVEIVLSC 206 (654)
Q Consensus 136 ~~~~~~fLF-~d~Ll~~k~~~~~~~~~~~~~~~~~--l~v~~---~~~--~~~~~~-~~~f~~~~~~~~~~~~~~~~l~a 206 (654)
++.+++.|. +..|.+-+...... ....+++.. +.+.. +.. ...... .+.|.+... ...+|.|+|
T Consensus 21 WkkR~fvL~~~~~L~yyk~~~~~~--~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~-----~~r~~~l~a 93 (112)
T 3aj4_A 21 WKKNWFDLWSDGHLIYYDDQTRQN--IEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCR-----DGKTISLCA 93 (112)
T ss_dssp EEEEEEEECTTSEEEEESSTTCCS--EEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEET-----TSCEEEEEC
T ss_pred eeceEEEEeeCCEEEEEcCCCCCC--CCccccccccceeecccccccccCCCCCCCcCcEEEEEec-----CCcEEEEEe
Confidence 567778884 45777776544322 223333332 34432 221 111112 457877531 135699999
Q ss_pred CChhhhhhhhcccCccc
Q psy5772 207 DTESESSLNVSNKSDKI 223 (654)
Q Consensus 207 ~s~~~k~~W~~~~~~~~ 223 (654)
.|+++...||.+|+.+.
T Consensus 94 ~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 94 ESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999988665
No 89
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=95.63 E-value=0.053 Score=56.95 Aligned_cols=98 Identities=9% Similarity=0.075 Sum_probs=61.2
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceE
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLI 187 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f 187 (654)
..+++|.|...+..+ . ....++.++++|=++.|.+-+.. . .. ....+.+....|..+.+ ....++|
T Consensus 277 ~~~k~G~L~K~~~~~---~-----~~~~WkkRwfvL~~~~L~y~k~~-~-~~-~~~~i~l~~~~v~~~~~---~~r~~~F 342 (385)
T 2q13_A 277 LTRKAGYLNARNKTG---L-----VSSTWDRQFYFTQGGNLMSQARG-D-VA-GGLAMDIDNCSVMAVDC---EDRRYCF 342 (385)
T ss_dssp CSCCEEEEEEC----------------CCEEEEEEEETTEEEEECSS-C-SS-CEEEEECTTCEEEEECC---TTCSSEE
T ss_pred CccEEEEEEEecCCC---C-----CcCCceeEEEEEECCEEEEecCC-C-cC-CCceEEccceEEEeccc---cCCCceE
Confidence 457889886542110 0 11235778899999998887762 2 11 12334555555555433 2234788
Q ss_pred EEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 188 LLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 188 ~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+.... ...+|.|+|.|++++..||..|+.++
T Consensus 343 ~i~t~~----~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 343 QITSFD----GKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp EEECTT----SCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred EEEeCC----CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 876432 12469999999999999999998776
No 90
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=95.60 E-value=0.016 Score=50.32 Aligned_cols=105 Identities=13% Similarity=0.126 Sum_probs=63.0
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCc---------e-EEEeeccccceEEEEccCC
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGS---------Y-SVIDYCTRAMMQMAAIEDS 178 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~---------~-~~~~~~~~~~l~v~~~~~~ 178 (654)
+.++|.|..-..-.+ .+|. ..+.++.+++.|=.+.|.+-|...... | .....+.+....+.... .
T Consensus 8 v~keG~L~rK~~~~~---gkk~-~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~-~ 82 (124)
T 3pp2_A 8 LDKAGVLHRTKTADK---GKRL-RKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAP-K 82 (124)
T ss_dssp -CEEEEEEEEEEEET---TEEC-SSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECC-G
T ss_pred EEEEEEEEEEEeccC---CccC-CCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecc-c
Confidence 677888854321100 1222 234567889999999999998543211 1 12233344444444331 1
Q ss_pred CCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 179 VPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 179 ~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
+....+|.|.+... .| .+|.|+|.|+++...|+..|+.+|
T Consensus 83 d~~krk~vF~l~t~---~~--~~ylfqA~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 83 DKSSRKNVLELRSR---DG--SEYLIQHDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp GGCSSSSEEEEECT---TS--CEEEEECSCHHHHHHHHHHHHHHH
T ss_pred ccCCCceEEEEECC---CC--CEEEEECCCHHHHHHHHHHHHHHH
Confidence 22234688887632 22 469999999999999999998877
No 91
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=95.54 E-value=0.012 Score=56.36 Aligned_cols=103 Identities=6% Similarity=-0.027 Sum_probs=66.3
Q ss_pred ceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccC-CCCCCCCc
Q psy5772 107 RWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIED-SVPPTNKY 185 (654)
Q Consensus 107 r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~ 185 (654)
...+++|.|.......+ . ..+.++.++++|-++.|.+-+..... ..+..+++..+.+....+ .......+
T Consensus 104 ~~v~k~G~L~Kkg~~~~--~-----~~k~WkkRwfVL~~~~L~Yyk~~~~~--~p~g~I~L~~~~~v~~~~~~~~~~k~~ 174 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHS--F-----LGFEWQKRWCALSKTVFYYYGSDKDK--QQKGEFAIDGYDVRMNNTLRKDGKKDC 174 (211)
T ss_dssp SSEEEEEEEEEEEHHHH--T-----TTCCCEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEECGGGCSSTTGGG
T ss_pred CCccEEEEEEEECCCCC--c-----CCCCcEeEEEEEECCEEEEEcCCCCc--cceEEEEeCCcEEEEcCCccccCCCCC
Confidence 35789999976532110 0 01235778899999999998855432 234455666666655332 11222346
Q ss_pred eEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 186 LILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 186 ~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.|.+... ...+|.|+|.|++++..||.+|+.++
T Consensus 175 ~F~I~t~-----~~r~~~l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 175 CFEICAP-----DKRIYQFTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp EEEEECS-----SSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcC-----CCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 7877631 12569999999999999999998776
No 92
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=95.52 E-value=0.039 Score=58.48 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=61.3
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceE
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLI 187 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f 187 (654)
...++|-|......++. .+.++.++++|=+..|.+-+...... ...+.+..+.|......+ ..++|
T Consensus 300 ~~~k~G~L~k~~~~g~~--------~~~W~rrwfvl~~~~l~y~~~~~~~~---~~~~~l~~~~v~~~~~~~---r~~cF 365 (407)
T 4h8s_A 300 LIQKAGYLNLRNKTGLV--------TTTWERLYFFTQGGNLMCQPRGAVAG---GLIQDLDNCSVMAVDCED---RRYCF 365 (407)
T ss_dssp CSCCEEEEEEEEECSSS--------CEEEEEEEEEECSSCEECCCTTCSSC---CCCBCSSCCEEEEECCTT---CSSEE
T ss_pred cceeeceeeeeccCCCC--------CCCceEEEEEEECCEEEEEeCCCCCC---CeEEECCceEEEECCCCC---CCceE
Confidence 35678888655322111 12356778999988888776432211 112345555565544322 34778
Q ss_pred EEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 188 LLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 188 ~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+.... +..+|+|+|.|++++..||+.|++++
T Consensus 366 ~i~~~~----~~~~~~l~A~s~~e~~~Wi~ai~~a~ 397 (407)
T 4h8s_A 366 QITTPN----GKSGIILQAESRKENEEWICAINNIS 397 (407)
T ss_dssp EEECTT----SSCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred EEEecC----CCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 776422 23459999999999999999998777
No 93
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=95.42 E-value=0.0046 Score=54.38 Aligned_cols=111 Identities=12% Similarity=0.058 Sum_probs=63.6
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCC-CceEEEeeccccceE---EEEccCCCCCCCC
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSN-GSYSVIDYCTRAMMQ---MAAIEDSVPPTNK 184 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~-~~~~~~~~~~~~~l~---v~~~~~~~~~~~~ 184 (654)
.+++|-|....... ....++.++++|-++.|.+-|.... ..-.....+++..+. |..... .....+
T Consensus 5 v~~~G~L~K~~~~~---------~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~-~~~~~~ 74 (134)
T 2y7b_A 5 VEERGFLTIFEDVS---------GFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANR-EFCARR 74 (134)
T ss_dssp CCEEEEEEEEEEET---------TEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCT-TTCCCT
T ss_pred ceEEeeEEEEcCCC---------CCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccch-hhccCC
Confidence 46778776542100 1123567789999999988873211 111223334445443 222211 112345
Q ss_pred ceEEEEEeecCC-------------C-ccEEEEEEcCChhhhhhhhcccCccccCCCCc
Q psy5772 185 YLILLTILENHE-------------Q-KTVEIVLSCDTESESSLNVSNKSDKILNSPSW 229 (654)
Q Consensus 185 ~~f~~~~~~~~~-------------~-~~~~~~l~a~s~~~k~~W~~~~~~~~~~~~~~ 229 (654)
+.|.+....... + ...+|.|+|.|++++..||.+|+.++.....|
T Consensus 75 ~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~~~w 133 (134)
T 2y7b_A 75 NTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDIRLW 133 (134)
T ss_dssp TEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHhcc
Confidence 788886532211 1 12469999999999999999999887544433
No 94
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.36 E-value=0.018 Score=49.04 Aligned_cols=83 Identities=6% Similarity=-0.059 Sum_probs=53.7
Q ss_pred cceEEEEecCC--eEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhh
Q psy5772 136 YAKLNLFLFTD--LLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESS 213 (654)
Q Consensus 136 ~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~ 213 (654)
++.+++.|=++ .+|+.-+...+ ......+++....|...........++.|.+. +. ..+|.|.|.|+++.+
T Consensus 23 WkkrWfVL~~~~~~~Ly~Yk~~~d-~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~----~~--~~~y~f~A~s~e~~~ 95 (112)
T 2coc_A 23 WSEVWAAIPMSDPQVLHLQGGSQD-GRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQ----WA--KQSWYLSASSAELQQ 95 (112)
T ss_dssp EEEEEEECCTTCTTCEEEECCTTC-SSSCSEECGGGCEEECCCSSSCCSSSEEEEEE----ET--TEEEEEEESSHHHHH
T ss_pred ceEEEEEEECCCccEEEEECCCCc-cCcceEEEcCCCEEEecCcccccCCCCEEEEe----cC--CeEEEEEcCCHHHHH
Confidence 45666777654 45554433222 23445677888887753333333346788876 11 357999999999999
Q ss_pred hhhcccCccccC
Q psy5772 214 LNVSNKSDKILN 225 (654)
Q Consensus 214 ~W~~~~~~~~~~ 225 (654)
+||..|+.+...
T Consensus 96 ~Wl~al~~A~~~ 107 (112)
T 2coc_A 96 QWLETLSTAAHS 107 (112)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHhcC
Confidence 999999876643
No 95
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=95.34 E-value=0.022 Score=47.45 Aligned_cols=81 Identities=9% Similarity=-0.016 Sum_probs=48.1
Q ss_pred cccceEEEEecCCeEEEEEecC----CCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCCh
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKS----NGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTE 209 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~----~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~ 209 (654)
+.++.+++.|=++.|.+-+... +..+.....+.+....+.... .....++.|.+... ...+|.|+|.|+
T Consensus 21 ~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~--~~~~~~~~F~i~~~-----~~~~~~~~A~s~ 93 (106)
T 1btn_A 21 RSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVAL--DYKKKKHVFKLRLS-----DGNEYLFQAKDD 93 (106)
T ss_dssp CCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECS--SCCSSSSEEEEECT-----TSCEEEEECSSH
T ss_pred CChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcc--cccCCccEEEEEec-----CCCEEEEECCCH
Confidence 3467788999999988887543 111111111222222222221 22233578887631 124699999999
Q ss_pred hhhhhhhcccCc
Q psy5772 210 SESSLNVSNKSD 221 (654)
Q Consensus 210 ~~k~~W~~~~~~ 221 (654)
++...||.+|+.
T Consensus 94 ~e~~~Wi~ai~~ 105 (106)
T 1btn_A 94 EEMNTWIQAISS 105 (106)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999998864
No 96
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.28 E-value=0.013 Score=49.99 Aligned_cols=91 Identities=11% Similarity=0.025 Sum_probs=56.8
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|....... .+.++.++++|-++.|.+-+....... ..+.+....|... ...++.|.
T Consensus 10 ~~~~G~L~K~~~~~----------~k~WkkR~fvL~~~~L~yyk~~~~~~~---~~i~l~~~~v~~~-----~~~~~~F~ 71 (114)
T 2da0_A 10 SEKKGYLLKKSDGI----------RKVWQRRKCSVKNGILTISHATSNRQP---AKLNLLTCQVKPN-----AEDKKSFD 71 (114)
T ss_dssp SCEEEEEEEECSSS----------CCCEEEEEEEEETTEEEECCSSCCSCC---EEEETTTSEEEEC-----SSSSSCEE
T ss_pred ccEEEEEEEeCCCC----------CCCceeEEEEEeCCEEEEEcCCCCCCC---CEEEeeeeEEEEC-----CCCCCEEE
Confidence 57788886553210 123567789999998888875433211 1112222233321 12346787
Q ss_pred EEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 189 LTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 189 ~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
+.. ...+|.|+|.|++++..||.+|+.++
T Consensus 72 I~~------~~r~~~l~a~s~~e~~~Wi~al~~~~ 100 (114)
T 2da0_A 72 LIS------HNRTYHFQAEDEQDYVAWISVLTNSK 100 (114)
T ss_dssp EEE------TTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEc------CCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 762 24679999999999999999988776
No 97
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.27 E-value=0.01 Score=51.27 Aligned_cols=84 Identities=17% Similarity=0.049 Sum_probs=51.7
Q ss_pred cccceEEEEecCCeEEEEEecCC---C-ceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCCh
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKSN---G-SYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTE 209 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~~---~-~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~ 209 (654)
+.++.+++.|=++.|.+-|.... + .+.-...+.+....+.... +....++.|.+.... ..+|.|+|.|+
T Consensus 30 ~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~--~~~~r~~~F~i~~~~-----~~~~~f~A~s~ 102 (123)
T 1wjm_A 30 RSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAF--DYRKRKHVFKLGLQD-----GKEYLFQAKDE 102 (123)
T ss_dssp CCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECT--TCSSCSSEEEEECSS-----SCEEEEECSSH
T ss_pred CCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeecc--cccCCCCEEEEEEcC-----CcEEEEECCCH
Confidence 44678889999999998875321 1 1100011122222232222 223346888886422 14699999999
Q ss_pred hhhhhhhcccCcccc
Q psy5772 210 SESSLNVSNKSDKIL 224 (654)
Q Consensus 210 ~~k~~W~~~~~~~~~ 224 (654)
++...||.+|+.++.
T Consensus 103 ~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 103 AEMSSWLRVVNAAIA 117 (123)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987773
No 98
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.96 E-value=0.019 Score=49.25 Aligned_cols=76 Identities=9% Similarity=0.039 Sum_probs=50.9
Q ss_pred cceEEEEecCC--eEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhh
Q psy5772 136 YAKLNLFLFTD--LLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESS 213 (654)
Q Consensus 136 ~~~~~~fLF~d--~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~ 213 (654)
++.+++.|-++ .|.+-+..... ..+..+++..+.+.... ....+.|.+... ..+|.|+|.|+++..
T Consensus 26 WkkRwfvL~~~~~~L~Yy~~~~~~--~~~g~I~L~~~~~~~~~----~~~~~~F~i~~~------~r~~~l~a~s~~e~~ 93 (119)
T 2dhk_A 26 WKSRWFFYDERKCQLYYSRTAQDA--NPLDSIDLSSAVFDCKA----DAEEGIFEIKTP------SRVITLKAATKQAML 93 (119)
T ss_dssp CEEEEEEEETTTTEEEEESSTTCC--SCSEEEEGGGCEEEECT----TGGGCEEEEECS------SCCEEEECSSHHHHH
T ss_pred ceeEEEEEECCccEEEEECCCCCc--ccccEEECCCCEEEecC----CCCCCEEEEEeC------CcEEEEECCCHHHHH
Confidence 56778999888 88887754432 23344556655544321 122467776532 345999999999999
Q ss_pred hhhcccCccc
Q psy5772 214 LNVSNKSDKI 223 (654)
Q Consensus 214 ~W~~~~~~~~ 223 (654)
.||..|+.++
T Consensus 94 ~Wi~al~~~~ 103 (119)
T 2dhk_A 94 YWLQQLQMKR 103 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998776
No 99
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=94.81 E-value=0.038 Score=54.72 Aligned_cols=106 Identities=9% Similarity=0.024 Sum_probs=64.6
Q ss_pred ceEEeecceEEEecC---ccchhhhhc--ccccccceEEEEecCCeEEEEEecCC----CceEEEeeccccceEEEEccC
Q psy5772 107 RWLVRSGSMNFVNVD---SKMTFARKL--NKTHFYAKLNLFLFTDLLVITKKKSN----GSYSVIDYCTRAMMQMAAIED 177 (654)
Q Consensus 107 r~li~~G~l~~~~~~---~~~~~~~k~--~~~~~~~~~~~fLF~d~Ll~~k~~~~----~~~~~~~~~~~~~l~v~~~~~ 177 (654)
...+++|.|.....- ++ ++. ...+.++.+++.|-++.|.+-|.... ........+++....+..+.+
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~----g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~ 84 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKE----RKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPE 84 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGG----GEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTT
T ss_pred CCeEEEEEeeecccccccCC----CCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCc
Confidence 347889998632110 11 111 00234678889999999999986421 112223334555555554433
Q ss_pred CCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 178 SVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 178 ~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
. ...++.|.+... ...+|.|+|.|+++...||.+|+.++
T Consensus 85 ~--~kk~~~F~I~t~-----~~r~y~f~A~s~ee~~~Wi~aI~~a~ 123 (263)
T 3a8p_A 85 H--PKKEHVFCLSNS-----CGDVYLFQATSQTDLENWVTAIHSAC 123 (263)
T ss_dssp C--SSCSSEEEEECT-----TSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred C--CCCCCEEEEEcC-----CCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2 223688887632 22469999999999999999999777
No 100
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=94.69 E-value=0.015 Score=49.89 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=28.5
Q ss_pred cCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeecc
Q psy5772 606 SSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVA 653 (654)
Q Consensus 606 ~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit 653 (654)
...++|+++|++.++.. ..+++ ++|+|||.++||+|
T Consensus 5 ~~~G~Ll~q~~f~V~~~--------~~k~~----eR~vFLFe~~ilf~ 40 (119)
T 1fho_A 5 GKLGRIIRHDAFQVWEG--------DEPPK----LRYVFLFRNKIMFT 40 (119)
T ss_dssp CCCCCSSEEEEEEECST--------TCSCE----EEEEEEETTEEEEE
T ss_pred HHcCCccccCceEEEeC--------CCCcc----eEEEEEecCcEEEE
Confidence 45688999999999951 12233 89999999999998
No 101
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=94.67 E-value=0.032 Score=54.00 Aligned_cols=79 Identities=11% Similarity=-0.022 Sum_probs=56.1
Q ss_pred cccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhh
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESS 213 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~ 213 (654)
..++.+++.|-++.|.+.+.... ...+..+++..+.+..... ..++.|.+.. ...+|.|+|.|++++.
T Consensus 77 k~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~I~L~~~~~v~~~~----~k~~~F~I~t------~~r~~~l~A~s~~e~~ 144 (228)
T 3tfm_A 77 RNWKKRWFVLRQSKLMYFENDSE--EKLKGTVEVRSAKEIIDNT----NKENGIDIIM------ADRTFHLIAESPEDAS 144 (228)
T ss_dssp GGCEEEEEEECSSEEEEESSTTC--CSEEEEEEGGGCSEEEEET----TTTSEEEEEC------SSCEEEEECSSHHHHH
T ss_pred CCceEEEEEEeCCEEEEEeCCCC--cceeEEEEcCCCEEeccCC----CCCcEEEEEc------CCcEEEEEcCCHHHHH
Confidence 44678889999999999986544 2345556666555432111 2346787742 2356999999999999
Q ss_pred hhhcccCcccc
Q psy5772 214 LNVSNKSDKIL 224 (654)
Q Consensus 214 ~W~~~~~~~~~ 224 (654)
.||..|+.++.
T Consensus 145 ~Wv~aL~~~i~ 155 (228)
T 3tfm_A 145 QWFSVLSQVHS 155 (228)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998884
No 102
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=94.43 E-value=0.13 Score=44.63 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=27.8
Q ss_pred CCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 183 NKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 183 ~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
..+.|.+... ...+|.|+|.|+++++.||.+|+.++
T Consensus 88 ~~~~F~I~t~-----~~r~~~l~A~s~~e~~~Wi~ai~~~i 123 (128)
T 2rlo_A 88 ENFEFLIVSS-----TGQTWHFEAASFEERDAWVQAIESQI 123 (128)
T ss_dssp CCCCEEEECT-----TSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcC-----CCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 3567776521 12569999999999999999998776
No 103
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=94.16 E-value=0.035 Score=57.40 Aligned_cols=100 Identities=11% Similarity=0.043 Sum_probs=65.6
Q ss_pred EEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceEE
Q psy5772 109 LVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLIL 188 (654)
Q Consensus 109 li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~ 188 (654)
.+++|.|...+.. .+.++.+++.|-++.|.+-+..... ..+..+++..+.|..+.+. ...+.|.
T Consensus 213 ~~k~G~L~K~g~~-----------~k~WkkRwFVL~~~~L~Yyk~~~~~--~p~G~I~L~~~~v~~~~~~---~~~~~F~ 276 (347)
T 2r09_A 213 PDREGWLLKLGGR-----------VKTWKRRWFILTDNCLYYFEYTTDK--EPRGIIPLENLSIREVEDP---RKPNCFE 276 (347)
T ss_dssp CCEEEEEEEECSS-----------SCCEEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEEECCS---SCSSEEE
T ss_pred cccCCeeEecCCC-----------cccceeEEEEEcCCEEEEEcCCCcc--CCcEEEEcCCeEEEEccCC---CCCCEEE
Confidence 3778888654211 1235778899999998888754432 2334556777776665432 2347788
Q ss_pred EEEeecC-----------C-----CccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 189 LTILENH-----------E-----QKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 189 ~~~~~~~-----------~-----~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
+...... . +...+|.|+|.|++++..||..|+.++.
T Consensus 277 I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 277 LYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp EECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 7643210 1 1235699999999999999999988773
No 104
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=94.15 E-value=0.06 Score=47.79 Aligned_cols=57 Identities=9% Similarity=0.064 Sum_probs=38.5
Q ss_pred eeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 163 DYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 163 ~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
..+.+..+.|.....+. ....+.|.|..... ....|.|.|.|.++...||..|++++
T Consensus 91 G~IdL~gc~V~~~~~~~-~~~~~vF~I~~~~~---~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 91 GVLDVPACQIAIRPEGK-NNRLFVFSISMPSV---AQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp EEECSTTCEEEEETTCS-SSCSCEEEEECTTT---SSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred ceEecCccEEEeccCCC-CCCceEEEEeCCCC---CCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 45556666666644322 22346777654322 14559999999999999999998876
No 105
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=94.10 E-value=0.052 Score=56.96 Aligned_cols=100 Identities=13% Similarity=0.034 Sum_probs=61.2
Q ss_pred ceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccc----cceEEEEccCCCCCC
Q psy5772 107 RWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTR----AMMQMAAIEDSVPPT 182 (654)
Q Consensus 107 r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~----~~l~v~~~~~~~~~~ 182 (654)
+.++++|.|...+... .+.++.+++.|-++.|.+-|..... ..+..+++ ....|..........
T Consensus 267 ~~~~k~G~L~K~g~~~----------~k~WKkRwFVL~~~~L~YYk~~~d~--~~~G~I~L~~~~~~~~v~~~~~~~~~~ 334 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQ----------TEGFRKRWFTMDDRRLMYFKDPLDA--FARGEVFIGSKESGYTVLHGFPPSTQG 334 (386)
T ss_dssp CCCSEEEEEEECCTTS----------CSCCEEEEEEEETTEEEEESSTTCS--BCSEEEECCCGGGTCEEEESCCTTCCS
T ss_pred cccceeeeEEEECCCC----------CCCCcccEEEEECCEEEEEecCCCc--ccceEEEeecceeeeeecccCCccccc
Confidence 4578889886543211 1235778899999999998864432 11222222 223344322222111
Q ss_pred C--CceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 183 N--KYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 183 ~--~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
. ++.|.+.. ...+|.|.|.|++++..||.+|++++.
T Consensus 335 ~~~~~~F~I~t------~~rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 335 HHWPHGITIVT------PDRKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp CCSCEEEEEEC------SSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 1 36666652 235799999999999999999998883
No 106
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=93.98 E-value=0.026 Score=56.69 Aligned_cols=85 Identities=9% Similarity=-0.020 Sum_probs=51.4
Q ss_pred cceEEEEecCCeEEEEEecCC----CceEEEeeccccceEEEEccC---CCCCCCCceEEEEEeecCCCccEEEEEEcCC
Q psy5772 136 YAKLNLFLFTDLLVITKKKSN----GSYSVIDYCTRAMMQMAAIED---SVPPTNKYLILLTILENHEQKTVEIVLSCDT 208 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k~~~~----~~~~~~~~~~~~~l~v~~~~~---~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s 208 (654)
++.++++|-++.|.+.+.... +.-.+ ..+..+.+..... .......++|.+.......+...+|.|+|.|
T Consensus 184 WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l---~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s 260 (291)
T 3tca_A 184 WKRRYFLLRASGIYYVPKGKTKTSRDLACF---IQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDD 260 (291)
T ss_dssp EEEEEEEECSSEEEECCTTCCSSTTTCEEE---EEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSS
T ss_pred ceEEEEEEeCCEEEEEecCccccccCceee---ccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCC
Confidence 577889999999888874332 11111 1223333333221 1122335788876543333344568999999
Q ss_pred hhhhhhhhcccCccc
Q psy5772 209 ESESSLNVSNKSDKI 223 (654)
Q Consensus 209 ~~~k~~W~~~~~~~~ 223 (654)
++++..||++|+-+.
T Consensus 261 ~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 261 ARTLSQWVMGIRIAK 275 (291)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887543
No 107
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=93.44 E-value=0.049 Score=46.93 Aligned_cols=83 Identities=10% Similarity=0.062 Sum_probs=51.5
Q ss_pred cccceEEEEecCCeEEEEEecCCCc------eEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcC
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKSNGS------YSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCD 207 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~~~~------~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~ 207 (654)
+.++.+++.|=++.|.+-|...... +.-...+.+....+....+ ....+|.|.+.... ..+|.|+|.
T Consensus 30 ~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d--~~kr~~~F~l~t~~-----~~~~lfqA~ 102 (122)
T 1dro_A 30 RSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASD--YTKKKHVLRVKLAN-----GALFLLQAH 102 (122)
T ss_dssp CCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCS--SSSSTTEEEEECSS-----SCEEEEECS
T ss_pred CCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCC--CCCCCeEEEEEEcC-----CCEEEEECC
Confidence 4567888999999999988543210 0000112333322322222 22345888876321 246999999
Q ss_pred ChhhhhhhhcccCccc
Q psy5772 208 TESESSLNVSNKSDKI 223 (654)
Q Consensus 208 s~~~k~~W~~~~~~~~ 223 (654)
|+++...||..|+.++
T Consensus 103 s~~e~~~Wi~ai~~~i 118 (122)
T 1dro_A 103 DDTEMSQWVTSLKAQS 118 (122)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998777
No 108
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=92.88 E-value=0.02 Score=51.02 Aligned_cols=35 Identities=17% Similarity=0.051 Sum_probs=0.0
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5772 379 LDTLDAGERKLQEAKFELITSEASYFKSLTVLEKH 413 (654)
Q Consensus 379 ~~~l~~~~~krq~~i~ELi~TE~~Yv~~L~~l~~~ 413 (654)
.+..+.++.-|+.++.+++++|+.|++.|+.+...
T Consensus 97 ~~~~~~~~~~r~~v~~~~~~~E~~y~~~~~~~~~~ 131 (142)
T 2kbt_A 97 VDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVT 131 (142)
T ss_dssp -----------------------------------
T ss_pred cchhhHHHHHHHHhhhcCccchhhHHHHHhhcccc
Confidence 45667778899999999999999999999988764
No 109
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=92.37 E-value=0.1 Score=44.61 Aligned_cols=88 Identities=8% Similarity=0.072 Sum_probs=50.4
Q ss_pred cceEEEEecCCeEEEEEecCCC-ceEEEeeccccc-eEEEEccCCC--C---CCCCceEEEEEeecCCCccEEEEEEcCC
Q psy5772 136 YAKLNLFLFTDLLVITKKKSNG-SYSVIDYCTRAM-MQMAAIEDSV--P---PTNKYLILLTILENHEQKTVEIVLSCDT 208 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k~~~~~-~~~~~~~~~~~~-l~v~~~~~~~--~---~~~~~~f~~~~~~~~~~~~~~~~l~a~s 208 (654)
++.+++.|=+.-|.+-+..... .-.....++++. ..|+.+...+ + .+-.+.|.+............+.|.|.|
T Consensus 20 Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s 99 (117)
T 2rov_A 20 WVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANS 99 (117)
T ss_dssp CCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSS
T ss_pred cEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCC
Confidence 5667788877777777632210 001112333443 3444443321 1 1123568876433211123679999999
Q ss_pred hhhhhhhhcccCccc
Q psy5772 209 ESESSLNVSNKSDKI 223 (654)
Q Consensus 209 ~~~k~~W~~~~~~~~ 223 (654)
++++++||.+++.++
T Consensus 100 ~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 100 TEEQQKWVSRLVKKI 114 (117)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988776
No 110
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=91.87 E-value=0.22 Score=48.75 Aligned_cols=89 Identities=8% Similarity=-0.040 Sum_probs=58.3
Q ss_pred ccceEEEEecCCeEEEEEecCCC-ceEEEeeccccceEEEEccCCC---CCCCCceEEEEEeecCCCccEEEEEEcCChh
Q psy5772 135 FYAKLNLFLFTDLLVITKKKSNG-SYSVIDYCTRAMMQMAAIEDSV---PPTNKYLILLTILENHEQKTVEIVLSCDTES 210 (654)
Q Consensus 135 ~~~~~~~fLF~d~Ll~~k~~~~~-~~~~~~~~~~~~l~v~~~~~~~---~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~ 210 (654)
.++.+|++|=++.|.+.++.... .-.+...++++.+.|-...... .+...++|.+.......+....+.|.|.+++
T Consensus 147 ~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~ 226 (256)
T 3hk0_A 147 SWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQ 226 (256)
T ss_dssp CEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHH
T ss_pred cceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHH
Confidence 36788899999999888855421 1112222457777776644221 2223577887644333344566899999999
Q ss_pred hhhhhhcccCccc
Q psy5772 211 ESSLNVSNKSDKI 223 (654)
Q Consensus 211 ~k~~W~~~~~~~~ 223 (654)
++..||+.|+-+.
T Consensus 227 ~~~~W~~aIr~ak 239 (256)
T 3hk0_A 227 TRTSWMTAFRLLK 239 (256)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887554
No 111
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=91.15 E-value=0.15 Score=50.33 Aligned_cols=96 Identities=14% Similarity=0.008 Sum_probs=59.8
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCC-------eEEEEEecCC---CceEEEeeccccceE-EEEcc
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD-------LLVITKKKSN---GSYSVIDYCTRAMMQ-MAAIE 176 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d-------~Ll~~k~~~~---~~~~~~~~~~~~~l~-v~~~~ 176 (654)
..+++|.|... +.++.+++.|-++ .|.+-|.... +.-..+..+++..+. |....
T Consensus 9 ~v~k~G~L~K~---------------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~ 73 (264)
T 1qqg_A 9 DVRKVGYLRKP---------------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRA 73 (264)
T ss_dssp CEEEEEEEECT---------------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEEC
T ss_pred CccEEEEEEEC---------------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEecc
Confidence 46889988421 2357788999998 7777774322 001233445555543 33322
Q ss_pred CCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccCCC
Q psy5772 177 DSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILNSP 227 (654)
Q Consensus 177 ~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~~~ 227 (654)
+ ...++.|.+... ..+|.|.|.|++++..||..|+.++....
T Consensus 74 ~---~~~~~~F~I~t~------~rty~l~A~se~e~~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 74 D---SKNKHLVALYTR------DEHFAIAADSEAEQDSWYQALLQLHNRAK 115 (264)
T ss_dssp C---SSCSSEEEEEES------SCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred C---CCCCcEEEEEEC------CEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 2 233578887632 35699999999999999999998885443
No 112
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.83 E-value=0.7 Score=40.17 Aligned_cols=78 Identities=10% Similarity=0.068 Sum_probs=46.4
Q ss_pred EEecCCeEEEEE-ecCCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhccc
Q psy5772 141 LFLFTDLLVITK-KKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNK 219 (654)
Q Consensus 141 ~fLF~d~Ll~~k-~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~ 219 (654)
.|.|.|-.|+.= .+....-.....+.+..+.|+.-+.. .+..|.+.+.........+|.|.|+|+++...||+++
T Consensus 32 WFvlk~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~~----~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~ 107 (137)
T 2ys3_A 32 WVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNV----SGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGC 107 (137)
T ss_dssp EEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBG----GGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHH
T ss_pred EEEEeCCEEEEECCchhccCCCceEEECCCCEEeccccc----cCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHH
Confidence 366666555554 44331112334455666666542111 2356666666553333466999999999999999977
Q ss_pred Ccc
Q psy5772 220 SDK 222 (654)
Q Consensus 220 ~~~ 222 (654)
+.+
T Consensus 108 rlA 110 (137)
T 2ys3_A 108 RLA 110 (137)
T ss_dssp HHH
T ss_pred HHh
Confidence 633
No 113
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=87.44 E-value=0.47 Score=47.01 Aligned_cols=88 Identities=11% Similarity=0.068 Sum_probs=53.6
Q ss_pred cceEEEEecCCeEEEEEecCCCce-EEEeeccccceEEEEccCC---CCCCCCceEEEEEeecCCCccEEEEEEcCChhh
Q psy5772 136 YAKLNLFLFTDLLVITKKKSNGSY-SVIDYCTRAMMQMAAIEDS---VPPTNKYLILLTILENHEQKTVEIVLSCDTESE 211 (654)
Q Consensus 136 ~~~~~~fLF~d~Ll~~k~~~~~~~-~~~~~~~~~~l~v~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~ 211 (654)
++.+|++|=.+.|.+.++.....- .+....+++.+.|-.+... ..+...++|.+.......+....+.|.|.++++
T Consensus 174 WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~ 253 (281)
T 4gmv_A 174 WKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRT 253 (281)
T ss_dssp EEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHH
T ss_pred CeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHH
Confidence 577889999999988875432111 1112235666666654321 122345788877543333444568999999999
Q ss_pred hhhhhcccCccc
Q psy5772 212 SSLNVSNKSDKI 223 (654)
Q Consensus 212 k~~W~~~~~~~~ 223 (654)
+..||..|+-+.
T Consensus 254 ~~~Wv~Air~ak 265 (281)
T 4gmv_A 254 LHQWVNGIRIAK 265 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999887544
No 114
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=84.87 E-value=0.62 Score=48.67 Aligned_cols=97 Identities=10% Similarity=-0.017 Sum_probs=59.8
Q ss_pred EeecceEEEecCccchhhhhcccccccceEEEEe--cCCeEEEEEecCCCceEEEeeccccceEEEEccCCCCCCCCceE
Q psy5772 110 VRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFL--FTDLLVITKKKSNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLI 187 (654)
Q Consensus 110 i~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fL--F~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f 187 (654)
+++|.|...+.. .+.++.++++| =++.|.+=+.... -..+..+.+..+.+....+ .....+.|
T Consensus 147 ~keG~L~KrG~~-----------~k~WkrRwFVL~~~~~~L~Yy~~~~~--~~p~g~I~L~~~~~~~~~~--~~~~~~~f 211 (386)
T 3lju_X 147 YREGFLWKRGRD-----------NGQFLSRKFVLTEREGALKYFNRNDA--KEPKAVMKIEHLNATFQPA--KIGHPHGL 211 (386)
T ss_dssp EEEEEEEEECSS-----------SCCEEEEEEEEETTTTEEEEEC-------CCSEEEEGGGEEEEECHH--HHTSTTCE
T ss_pred ccccceeeeccc-----------cCCceEEEEEEEcCCCEEEEECCCCc--cCcccEEEeeccEEEEccc--ccCCCceE
Confidence 567777554321 12356677888 5677766654321 2334455566665554211 11245788
Q ss_pred EEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 188 LLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 188 ~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+.+... +....|.|+|.|.++...|+..|+.+.
T Consensus 212 ~I~~~~~--~~~R~y~l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 212 QVTYLKD--NSTRNIFIYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp EEEEEET--TEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEecC--CCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence 8877663 555789999999999999999997553
No 115
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=84.51 E-value=0.48 Score=40.62 Aligned_cols=39 Identities=13% Similarity=0.151 Sum_probs=31.0
Q ss_pred CCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 180 PPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 180 ~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
.+++.|+|.++.... .+|+|.|.++.+++.|+++|+..+
T Consensus 91 mPD~~nTFVlK~~n~-----~eyi~ea~d~~q~~sWla~Ir~C~ 129 (136)
T 1v5m_A 91 MPEKDNTFVLKVENG-----AEYILETIDSLQKHSWVADIQGCV 129 (136)
T ss_dssp SCCCTTEECCBCTTS-----CBEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCccceEEEEecCC-----cEEEEEcCCHHHHHHHHHHHHhhc
Confidence 356789998773222 359999999999999999998766
No 116
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=84.36 E-value=0.37 Score=41.95 Aligned_cols=38 Identities=8% Similarity=0.069 Sum_probs=24.1
Q ss_pred cCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeeccC
Q psy5772 606 SSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPVAG 654 (654)
Q Consensus 606 ~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Llit~ 654 (654)
..-...++.|.+.... +..... ++||+|||+|+||+||
T Consensus 23 ~~lG~ii~~s~v~~~~-------~~~~~~----~eR~l~LF~~~Ll~~s 60 (132)
T 1v61_A 23 KTLGNVIFMSQVVMQH-------GACEEK----EERYFLLFSSVLIMLS 60 (132)
T ss_dssp TTTCCCSCEEEEEBCC-------SSSSCC----CEEEEEECSSCEEEEE
T ss_pred hhcCCeEEEeeEEEEE-------cccCcc----eEEEEEEcCCeEEEEE
Confidence 3444666666666542 011112 3899999999999985
No 117
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=76.78 E-value=0.69 Score=45.74 Aligned_cols=83 Identities=7% Similarity=0.001 Sum_probs=52.0
Q ss_pred cccceEEEEecCCeEEEEEecCCCce----EEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCCh
Q psy5772 134 HFYAKLNLFLFTDLLVITKKKSNGSY----SVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTE 209 (654)
Q Consensus 134 ~~~~~~~~fLF~d~Ll~~k~~~~~~~----~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~ 209 (654)
..++.+++.|=++.|.|-|....... .....+.+....+... .+....+|.|.+... ...+|.|+|.+.
T Consensus 37 r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a--~d~~kKk~vF~L~t~-----~g~~yLFQA~s~ 109 (279)
T 3a8n_A 37 RKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAV--PEHPKKDFVFCLSNS-----LGDAFLFQTTSQ 109 (279)
T ss_dssp CCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCC--TTSSSSCSCCCEEET-----TTEEEECCCSCH
T ss_pred CCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEec--cccCCCCcEEEEEcC-----CCCEEEEeCCCH
Confidence 44678889999999999885432211 1111233333333321 223334678888643 235699999999
Q ss_pred hhhhhhhcccCccc
Q psy5772 210 SESSLNVSNKSDKI 223 (654)
Q Consensus 210 ~~k~~W~~~~~~~~ 223 (654)
++-..|+.+|..++
T Consensus 110 eEm~~WI~aI~~a~ 123 (279)
T 3a8n_A 110 TELENWITAIHSAC 123 (279)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998666
No 118
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=74.01 E-value=5.6 Score=35.61 Aligned_cols=78 Identities=14% Similarity=0.053 Sum_probs=47.8
Q ss_pred EEEEecCCeEEEEEecCCC-ceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhc
Q psy5772 139 LNLFLFTDLLVITKKKSNG-SYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVS 217 (654)
Q Consensus 139 ~~~fLF~d~Ll~~k~~~~~-~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~ 217 (654)
++-|.|.|..|..-+..+. .......+.+..+.|+.-+.. ....|.+.+.........++.|.|.|+++..+||.
T Consensus 68 ryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnv----a~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMA 143 (173)
T 4f7h_A 68 QYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNI----SGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMA 143 (173)
T ss_dssp EEEEEEETTEEEEESCGGGCSSCCSEEEECTTCEEEEEEET----TTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHH
T ss_pred eEEEEEeCCEEEEEcCHhHhcCCCceEEecCceEEeccccc----cccceeEEEeccCCCCcceeeeecCCHHHHHHHHH
Confidence 3578887776666543222 222334445666666642211 12456666666655445668899999999999998
Q ss_pred ccC
Q psy5772 218 NKS 220 (654)
Q Consensus 218 ~~~ 220 (654)
+.+
T Consensus 144 Acr 146 (173)
T 4f7h_A 144 ACR 146 (173)
T ss_dssp HHH
T ss_pred Hhh
Confidence 644
No 119
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=73.94 E-value=1.8 Score=45.86 Aligned_cols=104 Identities=9% Similarity=0.010 Sum_probs=56.8
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEec-CCeEEEEEecCCCceEEEeeccccceEEEEccC-CCCCCCCc
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLF-TDLLVITKKKSNGSYSVIDYCTRAMMQMAAIED-SVPPTNKY 185 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF-~d~Ll~~k~~~~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~ 185 (654)
..+++|.|...+.. .+.++.+++.|- +..|++-|.+... .....+++..+.+..+.. .......+
T Consensus 5 ~v~keG~L~K~g~~-----------~k~Wk~r~fvL~~~~~l~yyk~~~~~--~~~~~i~l~~~~~~~~~~~~~~~~~~~ 71 (446)
T 4ejn_A 5 AIVKEGWLHKRGEY-----------IKTWRPRYFLLKNDGTFIGYKERPQD--VDQREAPLNNFSVAQCQLMKTERPRPN 71 (446)
T ss_dssp CEEEEEEEEEEETT-----------TTEEEEEEEEEETTSBEEEESSCC---------CCCGGGBCTTCEEEEECSSSTT
T ss_pred eEEEEeeEEeeccc-----------cccccceEEEEeeCCEEEEEecCCCC--CccCcccccCccccceeecCCCCCCCc
Confidence 36888888654321 122466778886 5777777654432 122333444433221110 00122246
Q ss_pred eEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccccCC
Q psy5772 186 LILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKILNS 226 (654)
Q Consensus 186 ~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~~~ 226 (654)
.|.+....+. ......+.+.+++++..|+.+|+.++...
T Consensus 72 ~f~I~~~~~~--~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 72 TFIIRCLQWT--TVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp EEEEEEEETT--EEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred eeEEEcCCCc--eeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 7887654443 11234789999999999999999887533
No 120
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=68.18 E-value=6.9 Score=34.66 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=46.1
Q ss_pred EEEEecCCeEEEEEecC-CCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhc
Q psy5772 139 LNLFLFTDLLVITKKKS-NGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVS 217 (654)
Q Consensus 139 ~~~fLF~d~Ll~~k~~~-~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~ 217 (654)
++-|.|.|.-|..-+-. .........+.+..+.|+.-.. .....|.+.+.........++.|.|+|+.+..+||.
T Consensus 47 ryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCEVtPDVn----va~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMA 122 (165)
T 4bbk_A 47 QYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVN----VSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMA 122 (165)
T ss_dssp EEEEEEETTEEEEESSGGGTTSCCSEEEECTTCEEEEEEE----TTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHH
T ss_pred eEEEEEeCCEEEEEcCHHHhcCCCceEEecCccEEecccc----cccceeeEEEecCCCCcceeeeeecCCHHHHHHHHH
Confidence 35788888776665432 2222333444566666653111 112345455544544444568899999999999998
Q ss_pred ccC
Q psy5772 218 NKS 220 (654)
Q Consensus 218 ~~~ 220 (654)
+.+
T Consensus 123 Acr 125 (165)
T 4bbk_A 123 ACI 125 (165)
T ss_dssp HHH
T ss_pred Hhh
Confidence 654
No 121
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=61.82 E-value=2.3 Score=30.69 Aligned_cols=35 Identities=9% Similarity=-0.080 Sum_probs=26.4
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 2 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 36 (58)
T 1jo8_A 2 WATAEYDYDAAEDNELT----FVEN-DKIINIEFVDDDWW 36 (58)
T ss_dssp CEEESSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEECceECCCCCCCcc----cCCC-CEEEEEEecCCCcE
Confidence 45677889999999988 7777 78877666556666
No 122
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=59.00 E-value=4.5 Score=29.67 Aligned_cols=35 Identities=6% Similarity=0.015 Sum_probs=26.7
Q ss_pred cccccCCCcCccCcc-hhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPK-IVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~-l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.++..++ ++ +.++ |++.+.....++||
T Consensus 5 ~~rAlydy~~~~~~e~Ls----~~~G-d~i~v~~~~~~~Ww 40 (60)
T 2lx7_A 5 RCRTLYPFSGERHGQGLR----FAAG-ELITLLQVPDGGWW 40 (60)
T ss_dssp EEEESCCCCSCCCSSCCC----CCTT-CEEEBSCCCTTSCE
T ss_pred EEEECcccCCCCCCCCcc----CCCC-CEEEEeEecCCCeE
Confidence 456778899988876 88 7777 88888777666666
No 123
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=58.24 E-value=3.2 Score=31.00 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=29.3
Q ss_pred CCCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 241 NVPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 241 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+...+.+..+|.+...++++ +..| |++.+.....++||
T Consensus 5 ~~~~~~Alydy~a~~~~ELs----~~~G-d~i~v~~~~~~gWw 42 (65)
T 2lj0_A 5 DLFSYQALYSYIPQNDDELE----LRDG-DIVDVMEKCDDGWF 42 (65)
T ss_dssp SSCEEEESSCBCCSSTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred cCEEEEEceeECCCCcCCcC----CCCC-CEEEEeEeCCCCEE
Confidence 34456788899999999999 8877 88877766666666
No 124
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=57.08 E-value=3.3 Score=30.34 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=28.2
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +..+ |++.+.....++||
T Consensus 4 ~~~~al~~y~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 39 (62)
T 2fpe_A 4 QTHRAIFRFVPRHEDELE----LEVD-DPLLVELQAEDYWY 39 (62)
T ss_dssp CCEEECSCBCCSSTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred CEEEECccCCccCcCcCc----CCCC-CEEEEEEecCCCEE
Confidence 345678889999999998 7777 88888776667777
No 125
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=54.11 E-value=5.9 Score=29.42 Aligned_cols=34 Identities=15% Similarity=0.023 Sum_probs=26.3
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 4 ~~Alydy~~~~~~eLs----~~~G-d~i~v~~~~~~gWw 37 (65)
T 2fei_A 4 CKVLFEYIPQNEDELE----LKVG-DIIDINEEVEEGWW 37 (65)
T ss_dssp EECSSCCCCCSTTBCC----CCTT-CEEECCCCSSSSEE
T ss_pred EEECccCCcCCcCccC----CCCC-CEEEEEEecCCCEE
Confidence 3566788898999988 7777 88888777666677
No 126
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=53.98 E-value=3.6 Score=30.13 Aligned_cols=36 Identities=8% Similarity=0.069 Sum_probs=27.6
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 6 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 41 (62)
T 1k4u_S 6 SQVEALFSYEATQPEDLE----FQEG-DIILVLSKVNEEWL 41 (62)
T ss_dssp EEEECCSCBCCCSSSBCC----BCSS-CEEEEEEESSSSCE
T ss_pred eEEEECCCCCcCCCCCcc----CCCC-CEEEEEEeCCCCEE
Confidence 345677889999999988 7777 88888776566666
No 127
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.88 E-value=9.7 Score=32.42 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=52.7
Q ss_pred eEEeecceEEEecCccchhhhhcccccccceEEEEecCCe------EEEEE--ecCCCceEEEeeccccc-eEEEEccCC
Q psy5772 108 WLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDL------LVITK--KKSNGSYSVIDYCTRAM-MQMAAIEDS 178 (654)
Q Consensus 108 ~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~------Ll~~k--~~~~~~~~~~~~~~~~~-l~v~~~~~~ 178 (654)
..+++|.|...... + +.+| ++.+++.||-+- |-+-. .+....-.-+..+.+++ +.|......
T Consensus 11 ~~vk~G~L~~q~q~-~--fgkK------Wrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e 81 (127)
T 2d9w_A 11 GAVKQGFLYLQQQQ-T--FGKK------WRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGE 81 (127)
T ss_dssp CSSEEEEEEECBCS-S--SSCB------CCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSC
T ss_pred ccccceEEEecccc-h--hhhh------hheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCc
Confidence 36889999766421 1 1111 466778888542 11111 11100001123344443 455554333
Q ss_pred -CCCCCCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcccc
Q psy5772 179 -VPPTNKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKIL 224 (654)
Q Consensus 179 -~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~~ 224 (654)
..+.+.+.|.+... ..+|.|.|.++ ++..||..|-+..+
T Consensus 82 ~~~pk~~~aF~l~T~------er~~~laAe~~-E~~~Wi~~ic~~aF 121 (127)
T 2d9w_A 82 ASSPRDTSAFFLETK------ERLYLLAAPAA-ERGDWVQAICLLAF 121 (127)
T ss_dssp SSSCSSCEEEEEEES------SCEEEEEECHH-HHHHHHHHHHHHHT
T ss_pred cCCCCcceEEEEEeC------CcEEEEEeCcH-HHHHHHHHHHHHhc
Confidence 22333455555432 24599999975 89999998876654
No 128
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=50.73 E-value=7.3 Score=30.30 Aligned_cols=36 Identities=8% Similarity=0.061 Sum_probs=28.4
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 19 ~~~~Alydy~a~~~~eLs----f~~G-d~I~Vl~~~~~gWw 54 (79)
T 1z9q_A 19 PRAEALFDFTGNSKLELN----FKAG-DVIFLLSRINKDWL 54 (79)
T ss_dssp CCEEESSCCCCSSTTBCC----CCTT-CCBCCCEESSSSEE
T ss_pred eEEEEcCccCCCCCCccc----ccCC-CEEEEeEecCCCEE
Confidence 345778889999999998 7777 88888777666666
No 129
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=50.42 E-value=11 Score=28.95 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=28.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +..| |++.+.....++||
T Consensus 21 ~~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 56 (77)
T 1awj_A 21 TLVIALYDYQTNDPQELA----LRCD-EEYYLLDSSEIHWW 56 (77)
T ss_dssp SCCCCCCCBCCCCTTSCC----BCSS-SCCSCCCTTSSSBC
T ss_pred eEEEECccCCCCCcCCcC----CCCC-CEEEEEEecCCCCE
Confidence 346778889999999988 7777 88888777666666
No 130
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.83 E-value=8.4 Score=28.99 Aligned_cols=37 Identities=8% Similarity=-0.040 Sum_probs=28.7
Q ss_pred CCcccccCCCcC-ccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPV-QENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a-~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+ ...++++ +.++ |++.+.....++||
T Consensus 7 ~~~~~Alydy~~~~~~~eLs----f~~G-d~i~v~~~~~~~W~ 44 (71)
T 2gqi_A 7 GRRVRAILPYTKVPDTDEIS----FLKG-DMFIVHNELEDGWM 44 (71)
T ss_dssp CCCEEESSCCCCCTTSSCCC----CCTT-CBCCCCEECSSSCE
T ss_pred CCEEEECcccCCCCCCCCCC----CCCC-CEEEEEEecCCCEE
Confidence 345678889999 8899988 7777 88888777666666
No 131
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=49.41 E-value=5.3 Score=29.19 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=28.7
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 21 ~~~~~alydy~a~~~~eLs----f~~G-d~i~v~~~~~~~Ww 57 (62)
T 1g2b_A 21 KELVLALYDYQEKSPREVT----MKKG-DILTLLNSTNKDWW 57 (62)
T ss_dssp SCEEEECSCBCCSSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred ceEEEEeeeECCCCCCccC----CCCC-CEEEEEEecCCCEE
Confidence 3456788899999999998 7776 88888777666666
No 132
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=49.31 E-value=90 Score=27.39 Aligned_cols=90 Identities=7% Similarity=-0.005 Sum_probs=56.6
Q ss_pred CCceEEeecceEEEecCccchhhhhcccccccceEEEEecCCeEEEEEecCCCceEEEeeccccc-eEEEEccCCCCCCC
Q psy5772 105 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLLVITKKKSNGSYSVIDYCTRAM-MQMAAIEDSVPPTN 183 (654)
Q Consensus 105 ~~r~li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~-l~v~~~~~~~~~~~ 183 (654)
++..++++|.+.... + .+ .+.|++.|-+--.++.-... ...++.-++++. +.|+...
T Consensus 48 ~ge~Ilk~G~v~Krk---G-l~---------~kkR~liLT~~PrL~Yvdp~--~~~~KGeIpls~~l~ve~k~------- 105 (151)
T 1w1g_A 48 ENNLILKMGPVDKRK---G-LF---------ARRRQLLLTEGPHLYYVDPV--NKVLKGEIPWSQELRPEAKN------- 105 (151)
T ss_dssp TTCCEEEEEEEEEEE---T-TE---------EEEEEEEEETTTEEEEEETT--TTEEEEEECCCTTCEEEESS-------
T ss_pred CCCcEEEEEEEEecc---c-Cc---------ceeEEEEEcCCceEEEEcCc--cccccceEecCCCeeEEEcC-------
Confidence 555688889885321 1 11 14566788777666665433 346677777663 4454422
Q ss_pred CceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCccc
Q psy5772 184 KYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDKI 223 (654)
Q Consensus 184 ~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~~ 223 (654)
...|.+.. ...+|.|.++ ....+.|++.|.+++
T Consensus 106 ~~~F~I~T------p~RtY~~~d~-~~~AqeWv~aI~~~~ 138 (151)
T 1w1g_A 106 FKTFFVHT------PNRTYYLMDP-SGNAHKWCRKIQEVW 138 (151)
T ss_dssp SSEEEEEE------TTEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred CCEEEEEC------CCceEEEEcC-ccCHHHHHHHHHHHH
Confidence 23666542 2367999997 789999999888766
No 133
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=48.98 E-value=4.2 Score=29.15 Aligned_cols=35 Identities=9% Similarity=0.183 Sum_probs=25.2
Q ss_pred cccccCCC-cCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTY-PVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~-~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+| .+...++++ +.++ |++.+.....++||
T Consensus 2 ~~~al~d~~~~~~~~eLs----~~~G-d~i~v~~~~~~gW~ 37 (58)
T 1zuy_A 2 MFEAAYDFPGSGSPSELP----LKKG-DVIYITREEPSGWS 37 (58)
T ss_dssp EEEESSCBCCCSCTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred EEEEecccCCCCCCCcCC----CCCC-CEEEEEEecCCCeE
Confidence 44567788 788888888 7777 77777666556566
No 134
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=48.85 E-value=10 Score=28.43 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=27.5
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 8 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 42 (71)
T 1hsq_A 8 AVKALFDYKAQREDELT----FIKS-AIIQNVEKQEGGWW 42 (71)
T ss_dssp CCCCSSCCCCSSSSSCC----CCTT-CCCBSCCCBTTTEE
T ss_pred EEEECCCCCcCCCCccC----CCCC-CEEEEEEecCCCEE
Confidence 45677889999999988 7777 88888777666666
No 135
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=48.71 E-value=5 Score=30.28 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=29.0
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +..| |++.+.....++||
T Consensus 6 ~~~~~al~~y~~~~~~eLs----~~~G-d~i~v~~~~~~gW~ 42 (71)
T 2fpf_A 6 EQTHRAIFRFVPRHEDELE----LEVD-DPLLVELQAEDYWY 42 (71)
T ss_dssp CCCEEECSCBCCSSTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred CeEEEECeeECccCCCccc----CcCC-cEEEEeEecCCCEE
Confidence 3456778899999999998 7777 88888777667777
No 136
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=48.67 E-value=6.4 Score=30.53 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=28.3
Q ss_pred CCCcccccCCCcCccCcchhhhhhccccccccccCCCCccc-hh
Q psy5772 241 NVPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAY-WD 283 (654)
Q Consensus 241 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~-w~ 283 (654)
....+.+..+|.+...++++ +.+| |++.+.....++ ||
T Consensus 9 ~~~~~~alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~gWw 47 (80)
T 2i0n_A 9 FAKYARALKDYNVSDTSLLP----FKRN-DIITITFKDQENKWF 47 (80)
T ss_dssp CCCEEEESSCBCCCSSSSCC----BCSS-EEEEEEEESSSSSEE
T ss_pred CCeEEEECCCCCcCCCCCcC----CCCC-CEEEEEEecCCCCEE
Confidence 34456788899999999999 7777 888776664444 66
No 137
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=48.40 E-value=4.9 Score=30.16 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.9
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 4 ~~~~Alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 39 (68)
T 2ew3_A 4 PCCRGLYDFEPENQGELG----FKEG-DIITLTNQIDENWY 39 (68)
T ss_dssp CEEEESSCBCCCSTTBCC----BCTT-CEEEEEEESSSSEE
T ss_pred CEEEEeeeECCCCCCccC----CCCC-CEEEEEEecCCCEE
Confidence 456678889999999998 7777 88887776666666
No 138
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=48.36 E-value=4.9 Score=29.09 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=28.0
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 41 (60)
T 2xmf_A 5 SPQCKALYAYDAQDTDELS----FNAN-DIIDIIKEDPSGWW 41 (60)
T ss_dssp SCEEEESSCBCCSSTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred CcEEEECccCCcCCcCCcC----CCCC-CEEEEEEecCCCEE
Confidence 3456778889999999988 7777 88877766666666
No 139
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=46.57 E-value=8.2 Score=29.07 Aligned_cols=36 Identities=11% Similarity=0.290 Sum_probs=27.8
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +.+| |++.+ ....++||
T Consensus 10 ~~~~~alydy~~~~~~eLs----~~~G-d~i~v-~~~~~~Ww 45 (72)
T 2kgt_A 10 GPKYVGLWDFKSRTDEELS----FRAG-DVFHV-ARKEEQWW 45 (72)
T ss_dssp CCEEECCTTCBCSSTTSCB----CCTT-CCEEE-EEECSSCE
T ss_pred CcEEEEcccCCCCCcCCcC----CCCC-CEEEE-eeCCCCEE
Confidence 3456788899999999998 7777 88888 77556666
No 140
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=45.51 E-value=11 Score=28.39 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=28.8
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 7 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (73)
T 2dbm_A 7 GPCCRALYDFEPENEGELG----FKEG-DIITLTNQIDENWY 43 (73)
T ss_dssp CCEEEESSCBCCCSTTCCC----BCTT-CEEECCBCSSSSEE
T ss_pred CCEEEEccccCCCCCCCcc----CCCC-CEEEEEEecCCCEE
Confidence 3456788899999999998 7777 88888777666666
No 141
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=45.39 E-value=6.2 Score=28.44 Aligned_cols=36 Identities=6% Similarity=0.096 Sum_probs=27.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 40 (59)
T 2g6f_X 5 SVVRAKFNFQQTNEDELS----FSKG-DVIHVTRVEEGGWW 40 (59)
T ss_dssp CEEEESSCBCCSSTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred cEEEECceeCCCCcCCcC----CCCC-CEEEEEEecCCCEE
Confidence 345677889999999988 7777 78877766556666
No 142
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=44.73 E-value=13 Score=27.53 Aligned_cols=37 Identities=11% Similarity=0.043 Sum_probs=28.2
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 8 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 44 (67)
T 1aww_A 8 LKKVVALYDYMPMNANDLQ----LRKG-DEYFILEESNLPWW 44 (67)
T ss_dssp CCEEEBSSCCCCSSSSSCC----CCSS-CEEECCCCCSSSEE
T ss_pred CeEEEECccCCCCCCCCcc----CCCC-CEEEEEEccCCCcE
Confidence 3456788899999999988 7777 88877776666566
No 143
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=44.60 E-value=17 Score=34.58 Aligned_cols=34 Identities=9% Similarity=0.006 Sum_probs=26.2
Q ss_pred CCceEEEEEeecCCCccEEEEEEcCChhhhhhhhcccCcc
Q psy5772 183 NKYLILLTILENHEQKTVEIVLSCDTESESSLNVSNKSDK 222 (654)
Q Consensus 183 ~~~~f~~~~~~~~~~~~~~~~l~a~s~~~k~~W~~~~~~~ 222 (654)
..+.|.+.. ....|.|+|.|++++..|+.+|+++
T Consensus 194 ~~~~f~iit------~~r~~~~~a~s~~e~~~Wi~~lq~~ 227 (228)
T 3tfm_A 194 RPNSFVIIT------ANRVLHCNADTPEEMHHWITLLQRS 227 (228)
T ss_dssp CTTEEEEEE------TTEEEEEECSSHHHHHHHHHHHCSC
T ss_pred CCCcEEEEe------CCceEEEEcCCHHHHHHHHHHHhhc
Confidence 456666542 2456889999999999999999865
No 144
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=44.56 E-value=6.2 Score=28.58 Aligned_cols=35 Identities=6% Similarity=-0.010 Sum_probs=26.6
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 6 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 40 (60)
T 1w70_A 6 RAEALFDFTGNSKLELN----FKAG-DVIFLLSRINKDWL 40 (60)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred EEEECccCCcCCCCCcc----CCCC-CEEEEEEeCCCCeE
Confidence 45677889999999988 7777 78877666566666
No 145
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=44.47 E-value=11 Score=28.01 Aligned_cols=36 Identities=8% Similarity=0.070 Sum_probs=27.6
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 8 ~~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (69)
T 2eqi_A 8 RTVKALYDYKAKRSDELT----FCRG-ALIHNVSKEPGGWW 43 (69)
T ss_dssp CEEEESSCBCCCSSSCCC----BCTT-CEEESCCCCSSSCE
T ss_pred cEEEECeeECCCCcCccC----CCCC-CEEEEEEcCCCCeE
Confidence 345778889999999998 7777 88888766555666
No 146
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=44.45 E-value=6.5 Score=28.16 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=25.4
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 4 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 37 (58)
T 1uti_A 4 ARALYDFEALEEDELG----FRSG-EVVEVLDSSNPSWW 37 (58)
T ss_dssp EEESSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEECccCCCCCcCCCC----CCCC-CEEEEEEECCCCEE
Confidence 3566788888888988 7777 78777666566666
No 147
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=44.21 E-value=11 Score=28.77 Aligned_cols=36 Identities=3% Similarity=0.004 Sum_probs=28.3
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+..+...+||
T Consensus 11 ~~~~alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 46 (76)
T 2ed1_A 11 RRVKTIYDCQADNDDELT----FIEG-EVIIVTGEEDQEWW 46 (76)
T ss_dssp EEEEESSCCCCSSSSBCC----CCSS-CEEEESSCCSSSEE
T ss_pred eEEEECccCCCCCcCCcC----cCCC-CEEEEEEecCCCEE
Confidence 346788899999999998 7777 88888776666666
No 148
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.88 E-value=9.5 Score=29.41 Aligned_cols=37 Identities=11% Similarity=0.246 Sum_probs=28.9
Q ss_pred CCCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 241 NVPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 241 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+.+..+|.+...++++ +.++ |++.+... .++||
T Consensus 16 ~~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~-~~gW~ 52 (79)
T 1x6b_A 16 DLPQVEITKAFFAKQADEVT----LQQA-DVVLVLQQ-EDGWL 52 (79)
T ss_dssp SCCEEEESSCCCCCSSSBCC----CCTT-EEEEEEEE-ETTEE
T ss_pred CCCEEEECeeECCCCcCCcC----CCCC-CEEEEEEe-CCCEE
Confidence 45567888999999999999 7777 78877666 55555
No 149
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=43.17 E-value=6.6 Score=29.34 Aligned_cols=38 Identities=13% Similarity=0.205 Sum_probs=28.4
Q ss_pred CCCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 241 NVPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 241 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+.+..+|.+...++++ +.+| +++.+.....++||
T Consensus 5 ~~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 42 (69)
T 4esr_A 5 TAPTVVALYDYTANRSDELT----IHRG-DIIRVFFKDNEDWW 42 (69)
T ss_dssp CCCEEEESSCBCCCSTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred ccCEEEECccCCCCCcCcCC----CCCC-CEEEEEEecCCCeE
Confidence 34566788899999999988 7777 77777666555555
No 150
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=43.13 E-value=6.7 Score=28.13 Aligned_cols=34 Identities=12% Similarity=0.080 Sum_probs=25.7
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 4 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 37 (58)
T 2bz8_A 4 AIVEFDYQAQHDDELT----ISVG-EIITNIRKEDGGWW 37 (58)
T ss_dssp EEESSCBCCCSTTBCC----BCTT-CEEEEEECCTTTEE
T ss_pred EEECcccCCCCcCEee----ECCC-CEEEEEEeCCCCEE
Confidence 3456788888889988 7777 88877766666666
No 151
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=42.91 E-value=6.5 Score=28.18 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=26.1
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 39 (58)
T 1zlm_A 5 VFRALYTFEPRTPDELY----FEEG-DIIYITDMSDTNWW 39 (58)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEECccCCCCCCCCcc----CCCC-CEEEEEEeCCCCEE
Confidence 34677788999899988 7777 78777666666666
No 152
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=42.75 E-value=7.7 Score=32.24 Aligned_cols=40 Identities=10% Similarity=0.087 Sum_probs=28.6
Q ss_pred CCCccCCCCCCcccccCCCcCccCcchhhhhhccccccccccCCC
Q psy5772 233 CSLFDPTANVPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ 277 (654)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 277 (654)
|...+.......+.+..+|.+...++++ +.+| +++.+..+
T Consensus 13 ~~d~~c~~~~~~~~Alydy~a~~~~ELs----f~~G-DiI~Vl~k 52 (108)
T 1i1j_A 13 CADQECSHPISMAVALQDYMAPDCRFLT----IHRG-QVVYVFSK 52 (108)
T ss_dssp ESSTTCCSCSEEEEESSCBCCSSTTBCC----BCTT-CEEEEEEE
T ss_pred CCCcccCceeeEEEECCccCCCCCCccc----cCCC-CEEEEEEe
Confidence 4333333344456788999999999999 7777 88888766
No 153
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=42.72 E-value=7.4 Score=28.84 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=25.9
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 4 ~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 37 (65)
T 2nwm_A 4 ARLKFDFQAQSPKELT----LQKG-DIVYIHKEVDKNWL 37 (65)
T ss_dssp EEECSCBCCCSTTBCC----BCTT-CEEEEEECCTTTCE
T ss_pred EEEeeeECCCCcCccC----CcCC-CEEEEEEecCCCEE
Confidence 3566788999999988 7777 78877766666666
No 154
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=42.57 E-value=7.9 Score=28.72 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=26.6
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 4 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 38 (67)
T 1gl5_A 4 IVVAMYDFQATEAHDLR----LERG-QEYIILEKNDLHWW 38 (67)
T ss_dssp CEEECSCBCCSSSSBCC----BCTT-CEEEEEECSSSSEE
T ss_pred EEEECccCCCCCCCeec----CCcC-CEEEEEEccCCCcE
Confidence 45677889999999998 7777 78877666656666
No 155
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=42.49 E-value=7.4 Score=27.83 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=25.7
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 5 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 38 (58)
T 1sem_A 5 VQALFDFNPQESGELA----FKRG-DVITLINKDDPNWW 38 (58)
T ss_dssp EEESSCBCCSSTTBCC----BCTT-CEEEEEECSSSSEE
T ss_pred EEECcCCCCCCCCCcC----CCCC-CEEEEEEecCCCEE
Confidence 4567788898888988 7777 78877666666666
No 156
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=42.12 E-value=8.8 Score=27.78 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=26.3
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 39 (61)
T 1y0m_A 5 AVKALFDYKAQREDELT----FTKS-AIIQNVEKQDGGWW 39 (61)
T ss_dssp CEEESSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEECcCCCcCCCCCcC----CcCC-CEEEEEEecCCCEE
Confidence 35677889999999988 7777 78877666555666
No 157
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=42.08 E-value=6.8 Score=28.03 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=26.3
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 39 (58)
T 2drm_A 5 QVKALYDYDAQTGDELT----FKEG-DTIIVHQKDPAGWW 39 (58)
T ss_dssp EEEESSCBCCCSTTBCC----BCTT-CEEEEEECCTTSEE
T ss_pred EEEECccCCCCCcCCcC----CCCC-CEEEEEEecCCCEE
Confidence 35677889999999988 7777 77777666656666
No 158
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.80 E-value=9.2 Score=28.47 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=28.4
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 7 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (68)
T 2dl4_A 7 GNTYVALYKFVPQENEDLE----MRPG-DIITLLEDSNEDWW 43 (68)
T ss_dssp CCEEEESSCCCCSSTTBCC----CCTT-CEEEEEECCCSSEE
T ss_pred CCEEEEeeeECCCCcCCcC----CCCC-CEEEEEEeCCCCEE
Confidence 3456788899999999998 7777 88877776666666
No 159
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=41.53 E-value=7.8 Score=27.60 Aligned_cols=34 Identities=6% Similarity=0.064 Sum_probs=25.0
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 4 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 37 (57)
T 1cka_A 4 VRALFDFNGNDEEDLP----FKKG-DILRIRDKPEEQWW 37 (57)
T ss_dssp EEESSCBCCSSTTBCC----BCTT-CEEEEEECSSSSEE
T ss_pred EEECCcCCCCCCCCCC----CCCC-CEEEEEEecCCCcE
Confidence 3566788888888888 7777 77777666556666
No 160
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=41.51 E-value=10 Score=29.75 Aligned_cols=35 Identities=3% Similarity=-0.065 Sum_probs=27.2
Q ss_pred cccccCCC-cCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTY-PVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~-~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+| .+...++++ +.+| |++.+..+..++||
T Consensus 20 ~~~Alydy~~a~~~~eLs----f~~G-DiI~V~~~~~~gWw 55 (83)
T 2ke9_A 20 KVRALKDFWNLHDPTALN----VRAG-DVITVLEQHPDGRW 55 (83)
T ss_dssp EEEESSCBCCCSCTTBCC----BCTT-CEEEESCSSCSSCE
T ss_pred EEEEccccCCCCCCCccc----ccCC-CEEEEEEecCCCeE
Confidence 45677889 788889988 7777 88888777666666
No 161
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=41.11 E-value=6.6 Score=28.14 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=25.8
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+..+++++ +.++ |++.+.....++||
T Consensus 5 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 38 (58)
T 1zx6_A 5 VEALYQFDPQQDGDLG----LKPG-DKVQLLEKLSPEWY 38 (58)
T ss_dssp EEECSCBCCCSTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred EEECceECCCCCCCcc----CCCC-CEEEEEEecCCCEE
Confidence 4567788999999988 7777 78877766556666
No 162
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=41.10 E-value=9.8 Score=28.25 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=28.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (68)
T 1wi7_A 8 RRCQVAFSYLPQNDDELE----LKVG-DIIEVVGEVEEGWW 43 (68)
T ss_dssp CCEEESSCBCCSSTTBCC----BCTT-CEECCCEEEETTEE
T ss_pred CEEEECccCCcCCCCCcc----CcCC-CEEEEEEcCCCCeE
Confidence 445778889999999998 7777 88888777566666
No 163
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=41.08 E-value=8.4 Score=28.49 Aligned_cols=35 Identities=6% Similarity=0.042 Sum_probs=26.3
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~~Alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 39 (65)
T 1b07_A 5 YVRALFDFNGNDEEDLP----FKKG-DILRIRDKPEEQWW 39 (65)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEECSSSSEE
T ss_pred EEEECCcCCCCCCCccC----CcCC-CEEEEEEecCCCeE
Confidence 35677889999999988 7777 78877666556666
No 164
>1m3w_A H10H24; four-helix bundle, heme binding, maquette, heme binding protein, electron transport, de novo protein; 2.80A {Synthetic} SCOP: k.8.1.1
Probab=40.97 E-value=29 Score=20.65 Aligned_cols=18 Identities=22% Similarity=0.302 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy5772 439 TAVRKCSERLLAALEQCW 456 (654)
Q Consensus 439 ~~I~~~h~~fl~~Le~~~ 456 (654)
-+|+.+|+.||+.+++..
T Consensus 4 geiwklheeflkkfeell 21 (32)
T 1m3w_A 4 GEIWKLHEEFLKKFEELL 21 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 478899999999887754
No 165
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=40.96 E-value=9.1 Score=28.41 Aligned_cols=36 Identities=11% Similarity=0.240 Sum_probs=27.6
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 11 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 46 (68)
T 1s1n_A 11 EEYIAVGDFTAQQVGDLT----FKKG-EILLVIEKKPDGWW 46 (68)
T ss_dssp EEEEECSCBCCSSSSCCC----BCSS-EEEEECSCCSSSEE
T ss_pred CEEEEcccCCCCCCCcCC----CCCC-CEEEEEEcCCCCeE
Confidence 445678889999999988 7777 88887777666666
No 166
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.91 E-value=7.8 Score=29.01 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=28.2
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 44 (70)
T 2ega_A 8 LEQYVVVSNYKKQENSELS----LQAG-EVVDVIEKNESGWW 44 (70)
T ss_dssp CBCEECCSCCCCCSSSSCC----CCTT-CBCEEEEECTTSEE
T ss_pred CcEEEECceECCCCCCccc----CCCC-CEEEEEEccCCCeE
Confidence 3456788899999999998 7777 78877666556666
No 167
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.87 E-value=11 Score=28.31 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=27.5
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +..+ |++.+.....++||
T Consensus 9 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 44 (71)
T 2dnu_A 9 EKYVTVQPYTSQSKDEIG----FEKG-VTVEVIRKNLEGWW 44 (71)
T ss_dssp EEEECSSCBCCSSTTBCC----BCTT-CEEEECCCCSSSEE
T ss_pred CEEEECCccCCCCCCCCc----CCCC-CEEEEeECCCCCeE
Confidence 345778889999999998 7777 88888777556565
No 168
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=40.72 E-value=11 Score=27.48 Aligned_cols=36 Identities=11% Similarity=0.004 Sum_probs=26.9
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ +++.+......+||
T Consensus 10 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 45 (65)
T 3ulr_B 10 ITAIALYDYQAAGDDEIS----FDPD-DIITNIEMIDDGWW 45 (65)
T ss_dssp SCEEECSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred eEEEEEeeECCCCcCEee----EecC-CEEEEEEecCCCEE
Confidence 345677889999999988 7777 77777666555666
No 169
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=40.44 E-value=9.5 Score=28.34 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=27.9
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 7 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (68)
T 2djq_A 7 GPRAKALCNYRGKNPGDLK----FNKG-DVILLRRQLDENWY 43 (68)
T ss_dssp CCEEEECSCCCSCCTTCCC----CCTT-CEEEEEECCCSSEE
T ss_pred ceEEEECCCCCCCCcCCcc----CCCC-CEEEEEEecCCCEE
Confidence 3456778889999999998 7777 77777666556666
No 170
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=40.34 E-value=7.1 Score=28.47 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=26.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 7 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 41 (62)
T 1uj0_A 7 RVRALYDFEAVEDNELT----FKHG-ELITVLDDSDANWW 41 (62)
T ss_dssp EEEESSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEECccCCCCCcCCcC----CCCC-CEEEEEEeCCCCEE
Confidence 45677889999999988 7777 78877666666666
No 171
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.49 E-value=9.3 Score=28.39 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=27.3
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (68)
T 1x2p_A 8 EEFVAIADYAATDETQLS----FLRG-EKILILRQTTADWW 43 (68)
T ss_dssp CEEEESSCCCCSSTTBCC----CCTT-CEEEEEECCSSSEE
T ss_pred CEEEECceECCCCcCCcC----CCCC-CEEEEEEcCCCCEE
Confidence 446778889999999988 7777 78877666556666
No 172
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=39.38 E-value=11 Score=28.58 Aligned_cols=36 Identities=8% Similarity=0.142 Sum_probs=27.8
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 18 ~~~~Alydy~a~~~~eLs----f~~G-d~i~Vl~~~~~gWw 53 (72)
T 2l0a_A 18 RKVRAIYDFEAAEDNELT----FKAG-EIITVLDDSDPNWW 53 (72)
T ss_dssp EEEEESSCBCCSSTTBCC----BCTT-CEEEEEEEEETTEE
T ss_pred eEEEECCccCCCCCCccC----CCCC-CEEEEEEecCCCEE
Confidence 346778899999999998 7777 88877766656666
No 173
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=38.99 E-value=9.7 Score=28.38 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=27.6
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 8 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 44 (69)
T 2dil_A 8 AQEYRALYDYTAQNPDELD----LSAG-DILEVILEGEDGWW 44 (69)
T ss_dssp CCEEECCSCBCCSSSSSCC----BCTT-CEEEEEECCSSSEE
T ss_pred CcEEEECccCCccCcCccC----CCCC-CEEEEEECCCCCEE
Confidence 3456788899999999998 7777 77777666555555
No 174
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=38.84 E-value=8.9 Score=27.63 Aligned_cols=36 Identities=11% Similarity=0.168 Sum_probs=25.8
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCC--ccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--SAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~~~w~ 283 (654)
+.+.+..+|.+...++++ +.++ |++.+.... .++||
T Consensus 4 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~Ww 41 (60)
T 1oot_A 4 PKAVALYSFAGEESGDLP----FRKG-DVITILKKSDSQNDWW 41 (60)
T ss_dssp CEEEESSCBCCCSTTBCC----BCTT-CEEEEEECCSCTTSEE
T ss_pred cEEEECccCCcCCcCEee----EcCC-CEEEEEEeCCCCCCeE
Confidence 345677889999999988 7777 777775553 44555
No 175
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.83 E-value=8.2 Score=28.73 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=27.7
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 7 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (68)
T 1x2k_A 7 GKVFRALYTFEPRTPDELY----FEEG-DIIYITDMSDTNWW 43 (68)
T ss_dssp SEEEEESSCCCCCSTTBCC----CCSS-CEEEEEECSCSSEE
T ss_pred cEEEEECceECCCCCCccc----CCCC-CEEEEEEcCCCCEE
Confidence 3345778889999999988 7777 78877666656666
No 176
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.39 E-value=14 Score=28.89 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=27.9
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCC--Cccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ--GSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~--~~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+... ...+||
T Consensus 8 ~~~~~al~dy~~~~~~eLs----f~~G-d~i~v~~~~~~~~~Ww 46 (85)
T 2dlp_A 8 SGYVIALRSYITDNCSLLS----FHRG-DLIKLLPVATLEPGWQ 46 (85)
T ss_dssp CCEEEESSCBCCSSSSBCC----BCTT-CEEEECCCSCCCTTEE
T ss_pred CEEEEECCCCCccCcCCcc----CcCC-CEEEEEEccCCCCCeE
Confidence 3445778889999999998 7777 88888765 556666
No 177
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=38.33 E-value=11 Score=27.32 Aligned_cols=37 Identities=11% Similarity=0.211 Sum_probs=27.0
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +.+| |++.+.....+||.
T Consensus 6 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 42 (62)
T 2iim_A 6 DNLVIALHSYEPSHDGDLG----FEKG-EQLRILEQSGEWWK 42 (62)
T ss_dssp TCEEEESSCBCCCSTTBCC----BCTT-CEEEEEECCSSEEE
T ss_pred CcEEEEcccCCCCCCCCcC----CCCC-CEEEEEEcCCCEEE
Confidence 3456778889999999988 7777 77777666554554
No 178
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=38.13 E-value=8 Score=28.17 Aligned_cols=34 Identities=9% Similarity=0.141 Sum_probs=25.1
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCC-Cccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ-GSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~-~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+... ..++||
T Consensus 4 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 38 (62)
T 2j6f_A 4 YIVEYDYDAVHDDELT----IRVG-EIIRNVKKLQEEGWL 38 (62)
T ss_dssp EEECSCBCCSSTTBCC----BCTT-CEEEEEEECSSTTEE
T ss_pred EEECccCCcCCcCCcC----CcCC-CEEEEEEecCCCCEE
Confidence 3567788999999988 7777 77777665 455566
No 179
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=37.79 E-value=14 Score=29.42 Aligned_cols=37 Identities=5% Similarity=0.160 Sum_probs=27.5
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCC--ccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--SAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+.... .++||
T Consensus 5 ~~~~~Alydy~a~~~~eLs----f~~G-d~i~v~~~~~~~~gWw 43 (93)
T 1uff_A 5 SSGYRALYPFEARNHDEMS----FNSG-DIIQVDEKTVGEPGWL 43 (93)
T ss_dssp CCCEEESSCBCCCSSSCCC----BCTT-CEEEECSSCCCSSSEE
T ss_pred CEEEEECccCCCCCCCCcC----CCCC-CEEEEeEccCCCCCEE
Confidence 3456778899999999998 8877 888877653 45555
No 180
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=37.76 E-value=7.7 Score=28.88 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=27.1
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 9 ~~~Alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 43 (68)
T 1tg0_A 9 KVVAQFPYKSDYEDDLN----FEKD-QEIIVTSVEDAEWY 43 (68)
T ss_dssp EEEESSCBCCSCTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred EEEECeeECcCCcCCCC----CCCC-CEEEEEEecCCCeE
Confidence 45778889999999998 7777 88887776656666
No 181
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=37.72 E-value=15 Score=29.44 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=28.7
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 19 ~~~~Alydy~a~~~~eLs----f~~G-d~i~V~~~~~~gWw 54 (92)
T 2o2o_A 19 RRCQVAFSYLPQNDDELE----LKVG-DIIEVVGEVEEGWW 54 (92)
T ss_dssp CEEEECSCBCCCSSSCCC----BCSS-CEEECCCGGGSSCB
T ss_pred eEEEEccccCCCCCcccc----ccCC-CEEEEeEecCCCEE
Confidence 456778899999999998 7777 88888877666666
No 182
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=37.71 E-value=9.1 Score=27.30 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=25.3
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.++ +++.+.....++||
T Consensus 5 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 38 (58)
T 2vwf_A 5 VQALFDFDPQEDGELG----FRRG-DFIHVMDNSDPNWW 38 (58)
T ss_dssp EEESSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEECceECCCCcCCcC----CCCC-CEEEEEEcCCCCEE
Confidence 4566788898888988 7777 77777666556666
No 183
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=37.58 E-value=9.3 Score=28.10 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=27.0
Q ss_pred CcccccCCCcC-ccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPV-QENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a-~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+ ...++++ +.++ |++.+.....++||
T Consensus 6 ~~~~alydy~~~~~~~eLs----~~~G-d~i~v~~~~~~gW~ 42 (65)
T 2j05_A 6 RRVRAILPYTKVPDTDEIS----FLKG-DMFIVHNELEDGWM 42 (65)
T ss_dssp CEEEESSCBCCCTTSSBCC----BCTT-CEEEEEEECTTSEE
T ss_pred cEEEEccccCCCCCCCcCc----CCCC-CEEEEeEecCCCEE
Confidence 34577888999 8889988 7777 78877666555566
No 184
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.54 E-value=9.5 Score=28.39 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=27.8
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (68)
T 2dmo_A 9 AHRVLFGFVPETKEELQ----VMPG-NIVFVLKKGNDNWA 43 (68)
T ss_dssp EEEECSSCCCCSSSSCC----CCTT-CEEEECEECSSSCE
T ss_pred EEEECcCCCcCCcCCCC----CCCC-CEEEEEEeCCCCEE
Confidence 45677889999999988 7777 88888777667777
No 185
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=37.37 E-value=19 Score=27.07 Aligned_cols=36 Identities=3% Similarity=-0.056 Sum_probs=27.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCC-CCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPP-QGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~-~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.. ....+||
T Consensus 11 ~~~~alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~~Ww 47 (72)
T 1ugv_A 11 RKAKALYACKAEHDSELS----FTAG-TVFDNVHPSQEPGWL 47 (72)
T ss_dssp CCEEESSCBCCCSSSBCC----BCTT-CEEBSCCBCSSTTEE
T ss_pred cEEEEccccCCcCCCEeC----CcCC-CEEEEEEecCCCCeE
Confidence 356788899999999998 8777 7877655 3555666
No 186
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=37.22 E-value=6.3 Score=36.23 Aligned_cols=36 Identities=8% Similarity=0.097 Sum_probs=26.8
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
....+..+|.+...++++ +.+| |++.+..+..+||.
T Consensus 18 ~~~~Alydf~~~~~~eLs----~~~G-d~i~v~~~~~~W~~ 53 (184)
T 3a98_A 18 RHGVAIYNFQGSGAPQLS----LQIG-DVVRIQETCGDWYR 53 (184)
T ss_dssp CEEEESSCBCCSSTTBCC----BCTT-CEEEEEEEETTEEE
T ss_pred eEEEEeeeeCCCCCCCCC----cCCC-CEEEEEecCCCEEE
Confidence 345677889999999998 7777 88887666555444
No 187
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=36.98 E-value=17 Score=27.55 Aligned_cols=35 Identities=6% Similarity=-0.019 Sum_probs=27.3
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 12 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 46 (76)
T 1ujy_A 12 IVKARFNFKQTNEDELS----VCKG-DIIYVTRVEEGGWW 46 (76)
T ss_dssp EEECCSCBCCSSTTSCC----BCSS-CCEEESSCCSSSCE
T ss_pred EEEECccCCcCCCCccc----CCCC-CEEEEEEecCCCEE
Confidence 45677889999999998 7777 88888777666666
No 188
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=36.84 E-value=10 Score=28.71 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=29.1
Q ss_pred CCCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 241 NVPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 241 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 12 ~~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 49 (73)
T 3c0c_A 12 DQPSCKALYDFEPENDGELG----FREG-DLITLTNQIDENWY 49 (73)
T ss_dssp CSCEEEESSCBCCSSTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred CCeEEEECccCCCCCCCCcc----CcCC-CEEEEEEecCCCEE
Confidence 34456788899999999998 7777 88887766566666
No 189
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.66 E-value=16 Score=28.91 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=27.4
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 19 ~~~alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 53 (90)
T 2yup_A 19 EAVAQYTFKGDLEVELS----FRKG-EHICLIRKVNENWY 53 (90)
T ss_dssp EEEECSCCCCCSSSBCC----CCTT-CEEEESSCCCSSEE
T ss_pred EEEEeecCCcCCcCcCC----CCCC-CEEEEEEEcCCCeE
Confidence 45678899999999998 7777 88888776556666
No 190
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=36.39 E-value=9 Score=28.76 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=25.6
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCC--ccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--SAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.... .++||
T Consensus 4 ~~~Alydy~a~~~~eLs----~~~G-d~i~vl~~~~~~~gWw 40 (69)
T 2ydl_A 4 YCKVIFPYEAQNDDELT----IKEG-DIVTLINKDCIDVGWW 40 (69)
T ss_dssp EEEESSCBCCCSTTBCC----BCTT-CEEEEEESCCSSTTEE
T ss_pred EEEEcccCCCCCCCccc----cCCC-CEEEEEEcCCCCCCEE
Confidence 34567889999999998 7777 787776653 45555
No 191
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=36.27 E-value=18 Score=26.69 Aligned_cols=36 Identities=6% Similarity=-0.064 Sum_probs=26.3
Q ss_pred CcccccCCCcC-ccCcchhhhhhccccccccccCCC-Cccchh
Q psy5772 243 PAFVDSGTYPV-QENPKIVAVFLLEGIHQIKHLPPQ-GSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a-~~~~~l~~~~~~~~~~~~~~~~~~-~~~~w~ 283 (654)
..+.+..+|.| ...++++ +.++ |++.+..+ ..++||
T Consensus 7 ~~~~al~dy~a~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 44 (67)
T 2kxc_A 7 QKVKTIFPHTAGSNKTLLS----FAQG-DVITLLIPEEKDGWL 44 (67)
T ss_dssp CEEEESSCBCCSSCSSBCC----BCTT-CEEEESSSSCBTTEE
T ss_pred EEEEEeecCCCCCCCCCCc----CCCC-CEEEEeECCCCCCcE
Confidence 45677888996 7888888 7777 88887764 555555
No 192
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.02 E-value=18 Score=27.25 Aligned_cols=36 Identities=8% Similarity=0.095 Sum_probs=27.0
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCc--cchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGS--AYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~--~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+..... .+||
T Consensus 8 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~Ww 45 (73)
T 2dm1_A 8 GTAVARYNFAARDMRELS----LREG-DVVRIYSRIGGDQGWW 45 (73)
T ss_dssp SEEEESSCBCCCSTTBCC----BCTT-CEEECCBSSSSSSSCE
T ss_pred CEEEECccCCcCCCCcCC----CCCC-CEEEEEEecCCCCCeE
Confidence 345778889999999998 7777 8888877653 2565
No 193
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=35.85 E-value=9.7 Score=27.85 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=25.1
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| +++.+.....++||
T Consensus 4 ~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 37 (65)
T 2oaw_A 4 VLALYDYQEKSPREVT----MKKG-DILTLLNSTNKDWW 37 (65)
T ss_dssp EEECSCBCCSSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEcccCCccCCCCCC----CCCC-CEEEEEEcCCCCEE
Confidence 3456788888888988 7777 78877666556666
No 194
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=35.74 E-value=12 Score=27.32 Aligned_cols=35 Identities=6% Similarity=0.095 Sum_probs=26.4
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 42 (64)
T 2ak5_A 8 VVRAKFNFQQTNEDELS----FSKG-DVIHVTRVEEGGWW 42 (64)
T ss_dssp EEEESSCBCCCSTTBCC----BCTT-CEEEEEECCTTSEE
T ss_pred EEEEccccCCcCcCccc----CCCC-CEEEEeEecCCCEE
Confidence 45677889999889988 7777 78877666556666
No 195
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=35.74 E-value=9.8 Score=28.42 Aligned_cols=34 Identities=12% Similarity=0.315 Sum_probs=25.2
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.+| +++.+.....+||.
T Consensus 7 ~~Alydy~a~~~~ELs----f~~G-d~i~vl~~~~~Ww~ 40 (67)
T 2b86_A 7 VIAKWDYTAQQDQELD----IKKN-ERLWLLDDSKTWWR 40 (67)
T ss_dssp EEESSCBCCSSTTSCC----BCTT-CEEEEEECSSSSCE
T ss_pred EEEeeeECCCCCCccc----cCCC-CEEEEEecCCCeEE
Confidence 4567889999999988 7777 78777666554454
No 196
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=35.52 E-value=18 Score=27.15 Aligned_cols=36 Identities=6% Similarity=-0.059 Sum_probs=26.5
Q ss_pred CcccccCCCcC-ccCcchhhhhhccccccccccCCC-Cccchh
Q psy5772 243 PAFVDSGTYPV-QENPKIVAVFLLEGIHQIKHLPPQ-GSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a-~~~~~l~~~~~~~~~~~~~~~~~~-~~~~w~ 283 (654)
..+.+..+|.+ ...++++ +.++ |++.+... ..++||
T Consensus 8 ~~~~al~dy~a~~~~~eLs----~~~G-d~i~v~~~~~~~gWw 45 (72)
T 1spk_A 8 QKVKTIFPHTAGNNKTLLS----FAQG-DVLTLLIPEEKDGWL 45 (72)
T ss_dssp CEEECSSCBCCSSCSSBCC----BCTT-CEEEECCSSCBTTEE
T ss_pred eEEEEeeeeCCCCCCCCCc----CCCC-CEEEEeEccCCCCcE
Confidence 45577888996 7888888 7777 88888765 555566
No 197
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=35.33 E-value=12 Score=27.99 Aligned_cols=37 Identities=5% Similarity=0.059 Sum_probs=27.1
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCC--Cccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ--GSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~--~~~~w~ 283 (654)
...+.+..+|.+...++++ +.+| +++.+... ..++||
T Consensus 6 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~Ww 44 (71)
T 1u5s_A 6 LHVVQTLYPFSSVTEEELN----FEKG-ETMEVIEKPENDPEWW 44 (71)
T ss_dssp SSEEEESSCCCCCSSSBCC----CCSS-CCEEEEECCCTTTCEE
T ss_pred cEEEEEcccCCCCCCCccc----CCCC-CEEEEEECCCCCCCCE
Confidence 3456778889999999998 7777 77777665 455555
No 198
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=35.21 E-value=7.2 Score=29.70 Aligned_cols=35 Identities=11% Similarity=0.109 Sum_probs=26.8
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.+| |++.+..+..++||
T Consensus 7 ~~~Alydy~a~~~~eLs----~~~G-d~i~v~~~~~~gWw 41 (73)
T 2lcs_A 7 RAVALYDFEPENDNELR----LAEG-DIVFISYKHGQGWL 41 (73)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEEEETTTEE
T ss_pred EEEECccCCCCCCCccC----CcCC-CEEEEEEEcCCCEE
Confidence 45677889999999988 7777 77777766666666
No 199
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=35.10 E-value=6.7 Score=28.38 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=26.8
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 42 (60)
T 2gnc_A 8 FAIAKFDYVGRSARELS----FKKG-ASLLLYHRASEDWW 42 (60)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEEEEETTEE
T ss_pred EEEECCCCCcCCcCCcC----CCCC-CEEEEEEecCCCEE
Confidence 45677889999999988 7777 88887776556666
No 200
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=35.06 E-value=11 Score=29.02 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=26.5
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.+| |++.+.....++||
T Consensus 7 ~~~Alydy~~~~~~eLs----~~~G-d~i~vl~~~~~~Ww 41 (79)
T 3cqt_A 7 LFEALYDYEARTEDDLS----FHKG-EKFQILNSSEGDWW 41 (79)
T ss_dssp CEEESSCBCCCSTTBCC----BCTT-CEEEEEECTTSSEE
T ss_pred EEEECccCCCCCcCcCC----CCCC-CEEEEEEecCCCeE
Confidence 45677889999999988 7777 77777666556666
No 201
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=35.01 E-value=11 Score=29.53 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=28.1
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +..| |++.+.....++||
T Consensus 17 ~~~~~Alydy~a~~~~eLs----f~~G-d~i~Vl~~~~~gWw 53 (83)
T 1neg_A 17 KELVLALYDYQEKSPREVT----MKKG-DILTLLNSTNKDWW 53 (83)
T ss_dssp CCEEEESSCBCCSSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred ceEEEEccccCCCCCCccc----cCCC-CEEEEEEecCCCEE
Confidence 3456788899999999998 7777 88877666555666
No 202
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=34.87 E-value=91 Score=27.92 Aligned_cols=73 Identities=15% Similarity=0.117 Sum_probs=50.9
Q ss_pred ceEEEEecCCe-----EEEEEec--CCCceEEEeeccccceEEEEccCCCCCCCCceEEEEEeecCCCccEEEEEEcCCh
Q psy5772 137 AKLNLFLFTDL-----LVITKKK--SNGSYSVIDYCTRAMMQMAAIEDSVPPTNKYLILLTILENHEQKTVEIVLSCDTE 209 (654)
Q Consensus 137 ~~~~~fLF~d~-----Ll~~k~~--~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~a~s~ 209 (654)
+++++.|--.. +.++|-| .+|.|++...-++.+|..-+..+. ....|.+++. ..|--+|.+.
T Consensus 65 K~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~----~~~gF~ltl~-------K~Y~W~a~s~ 133 (171)
T 3hie_A 65 KKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLE----ISEGFILTMS-------KKYYWETNSA 133 (171)
T ss_dssp EEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSS----CTTEEEEESS-------SEEEEECSSH
T ss_pred cceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCC----CCCcEEEEeC-------CeEEEecCCH
Confidence 45557665332 5556533 468999988888888877665332 2368888863 2388999999
Q ss_pred hhhhhhhcccC
Q psy5772 210 SESSLNVSNKS 220 (654)
Q Consensus 210 ~~k~~W~~~~~ 220 (654)
.||..++..+-
T Consensus 134 ~Er~~FI~sL~ 144 (171)
T 3hie_A 134 KERTVFIKSLI 144 (171)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998654
No 203
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=34.41 E-value=12 Score=27.69 Aligned_cols=35 Identities=6% Similarity=-0.182 Sum_probs=26.0
Q ss_pred cccccCCCcCc--cCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQ--ENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~--~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+. ..++++ +.+| |++.+.....++||
T Consensus 8 ~~~alydy~~~~~~~~eLs----~~~G-d~i~v~~~~~~gWw 44 (67)
T 2eyx_A 8 YARVIQKRVPNAYDKTALA----LEVG-ELVKVTKINVSGQW 44 (67)
T ss_dssp BEEECCCBCCCTTCSSBCC----BCSS-EEEEEEEECTTSEE
T ss_pred EEEEeEEECCCCCCCCccc----cCCC-CEEEEEEecCCCEE
Confidence 45667788887 777888 7776 88888777666676
No 204
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=34.35 E-value=16 Score=26.15 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=25.4
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCC-ccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG-SAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~-~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.... .++||
T Consensus 5 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~W~ 40 (60)
T 2x3w_D 5 RVRALYDYDGQEQDELS----FKAG-DELTKLGEEDEQGWC 40 (60)
T ss_dssp EEEECSCBCCSSSSBCC----BCTT-CEEEECSCCCSSSEE
T ss_pred EEEECcccCccCCCccc----CCCC-CEEEEEEccCCCCce
Confidence 35677889999999988 7777 777776653 33565
No 205
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=34.25 E-value=12 Score=27.90 Aligned_cols=36 Identities=6% Similarity=0.013 Sum_probs=26.5
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCC-ccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG-SAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~-~~~w~ 283 (654)
..+.+..+|.+...++++ +..| |++.+.... .++||
T Consensus 7 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 43 (71)
T 2jt4_A 7 KRGIVQYDFMAESQDELT----IKSG-DKVYILDDKKSKDWW 43 (71)
T ss_dssp EEEEECSCBCCSSTTBCC----BCTT-CEEEEEESSSCSSEE
T ss_pred CEEEEcccCCCCCCCccc----CCCC-CEEEEEECCCCCCCE
Confidence 345678889999999988 7777 777776654 55555
No 206
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=34.13 E-value=1.4e+02 Score=28.46 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=47.3
Q ss_pred CCCCCCCcccccccccccccCcHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHH
Q psy5772 14 PVCQSLSLHSFLMLPMQRVTRLPLLFDAILTRLRPNHSEYETCHTTLATLNKIVHECNE 72 (654)
Q Consensus 14 ~~~~~l~L~s~Li~PvQRi~rY~LLL~~llk~t~~~~~d~~~l~~Al~~i~~i~~~vN~ 72 (654)
...++++.-.+|+.|--|+--|+--+++.+|-|.+|+.+-..|+-....+.-+-+-+|.
T Consensus 314 kmtkkmsvlqmlvypyfrvrtyqayvddfikitkkdsqevkelevvhsqlaifqelint 372 (518)
T 4gou_A 314 KMTKKMSVLQMLVYPYFRVRTYQAYVDDFIKITKKDSQEVKELEVVHSQLAIFQELINT 372 (518)
T ss_dssp HHHTSCCHHHHHHGGGGHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhheehhHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 34568888899999999999999999999999999998888777665555444444443
No 207
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=34.01 E-value=10 Score=28.27 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=27.6
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +..+ |++.+.....++||
T Consensus 8 ~~~~al~~y~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (70)
T 2cuc_A 8 NMFVALHTYSAHRPEELD----LQKG-EGIRVLGKYQDGWL 43 (70)
T ss_dssp CCEECCSCBCCCSTTBCC----BCTT-CEEEEEEEEETTEE
T ss_pred cEEEECeeECcCCCCcCC----CCCC-CEEEEEEecCCCeE
Confidence 456778889999999988 7777 88877776555666
No 208
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=33.85 E-value=12 Score=26.23 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=24.3
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCc-cchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGS-AYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~-~~w~ 283 (654)
+.+..+|.+...++++ +.++ |++.+..... ++||
T Consensus 3 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~W~ 37 (54)
T 2a28_A 3 MEAIYAYEAQGDDEIS----IDPG-DIITVIRGDDGSGWT 37 (54)
T ss_dssp EEBCSCBCCCSTTBCC----BCTT-CEEEEEECCCSSSEE
T ss_pred EEECccCCcCCCCCcc----CCCC-CEEEEEEecCCCCEE
Confidence 3466788898889988 7777 7777766553 4555
No 209
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.58 E-value=17 Score=27.89 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=28.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 18 ~~~~al~dy~~~~~~eLs----f~~G-d~i~v~~~~~~gWw 53 (78)
T 2ed0_A 18 EKVVAIYDYTKDKEDELS----FQEG-AIIYVIKKNDDGWY 53 (78)
T ss_dssp EEEEECSCBCCSSTTBCC----BCSS-CEEEEEEECSSSEE
T ss_pred EEEEECccCCccCcCccc----ccCC-CEEEEEEeCCCCEE
Confidence 346788899999999999 7777 88887776666666
No 210
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=33.40 E-value=14 Score=27.82 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=26.4
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCC--ccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--SAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~~~w~ 283 (654)
..+.+..+|.+...++++ +.+| |++.+.... .++||
T Consensus 10 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~W~ 47 (73)
T 2k9g_A 10 DYCKVIFPYEAQNDDELT----IKEG-DIVTLINKDCIDVGWW 47 (73)
T ss_dssp EEEEECSCBCCSSTTBCC----BCTT-CEEEEEECCSSSTTEE
T ss_pred cEEEECccCCCCCCCeee----ECCC-CEEEEEECCCCCCCEE
Confidence 345678889999999998 7777 777776653 45555
No 211
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=33.38 E-value=12 Score=27.91 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=26.8
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (70)
T 2ecz_A 9 EAIAKFNFNGDTQVEMS----FRKG-ERITLLRQVDENWY 43 (70)
T ss_dssp CEEESSCCCCCSTTBCC----CCTT-CBCEEEEEEETTEE
T ss_pred EEEECccCCCCCcCCcC----CCCC-CEEEEEEecCCCeE
Confidence 45778889999999998 7777 78877766555566
No 212
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=33.31 E-value=13 Score=27.46 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=26.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 43 (68)
T 2dl3_A 9 PARAKFDFKAQTLKELP----LQKG-DIVYIYKQIDQNWY 43 (68)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEECCSTTEE
T ss_pred EEEECccCCCCCcCCcc----CCCC-CEEEEeEecCCCEE
Confidence 45677889999999988 7777 77777666556666
No 213
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=32.49 E-value=11 Score=27.85 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=26.6
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 42 (67)
T 2o9s_A 8 EAIAKFNFNGDTQVEMS----FRKG-ERITLLRQVDENWY 42 (67)
T ss_dssp EEEECSCBCCSSTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred EEEECccCCcCCcCccC----CCCC-CEEEEEEecCCCEE
Confidence 45677889999999988 7777 88877666555666
No 214
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=32.37 E-value=7.5 Score=27.87 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=25.2
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 4 ~~al~d~~~~~~~eLs----~~~G-d~i~v~~~~~~gW~ 37 (59)
T 1yn8_A 4 AVALYDFEPENDNELR----LAEG-DIVFISYKHGQGWL 37 (59)
T ss_dssp EEECSCBCCCSTTBCC----BCTT-CEEEEEEEEETTEE
T ss_pred EEECccCCCCCCCCcC----CCCC-CEEEEEEcCCCCeE
Confidence 3566788888888888 7777 77777666666666
No 215
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=32.21 E-value=24 Score=27.17 Aligned_cols=37 Identities=8% Similarity=-0.017 Sum_probs=27.3
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCC--Cccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ--GSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~--~~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+... ...+||
T Consensus 17 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~Ww 55 (81)
T 1x43_A 17 NRKARVLYDYDAANSTELS----LLAD-EVITVFSVVGMDSDWL 55 (81)
T ss_dssp CEEEEESSCCCCSSTTBCC----CCTT-CEEEEECCTTCCTTEE
T ss_pred CeEEEEcccCCCCCCCcCC----CCCC-CEEEEEEcCCCCCCcE
Confidence 3456788899999999999 7777 78777665 235555
No 216
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=32.09 E-value=11 Score=28.25 Aligned_cols=35 Identities=3% Similarity=0.074 Sum_probs=26.2
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCC-CCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPP-QGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~-~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.+| |++.+.. ...++||
T Consensus 13 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 48 (71)
T 1csk_A 13 ECIAKYNFHGTAEQDLP----FCKG-DVLTIVAVTKDPNWY 48 (71)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEEECSSTTEE
T ss_pred EEEEceeECcCCCCcCC----CCCC-CEEEEeECCCCCCCE
Confidence 45778899999999998 7777 7777766 4555555
No 217
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=31.90 E-value=15 Score=27.24 Aligned_cols=36 Identities=3% Similarity=0.218 Sum_probs=26.9
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....+||.
T Consensus 9 ~~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 44 (68)
T 2k2m_A 9 KWVLCNYDFQARNSSELS----VKQR-DVLEVLDDSRKWWK 44 (68)
T ss_dssp CEEEESSCBCCCSSSBCC----BCTT-CEEEEEECSSSEEE
T ss_pred EEEEECccCCCCCCCccc----CCCC-CEEEEEEcCCCeEE
Confidence 345778899999999998 7777 78777666655555
No 218
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=31.87 E-value=12 Score=27.99 Aligned_cols=37 Identities=11% Similarity=-0.041 Sum_probs=28.0
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 13 ~~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 49 (72)
T 4glm_A 13 LTYGVALYRFQALEPNELD----FEVG-DKIRILATLEDGWL 49 (72)
T ss_dssp CCEEEESSCBCCCSTTBCC----BCTT-CEEEEEEECSTTEE
T ss_pred CeEEEECccCCCCCCCcCC----CCCC-CEEEEEEccCCCEE
Confidence 3456778889999999988 7777 77777766666666
No 219
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.81 E-value=13 Score=28.40 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=26.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 9 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (77)
T 2d8j_A 9 YFVALFDYQARTAEDLS----FRAG-DKLQVLDTSHEGWW 43 (77)
T ss_dssp EEEESSCBCCSSSSBCC----BCTT-CCEEEEECCSSSEE
T ss_pred EEEEccCCCCCCCCccC----CCCC-CEEEEEECCCCCeE
Confidence 45777889999999988 7777 88888776555555
No 220
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=31.71 E-value=23 Score=26.01 Aligned_cols=36 Identities=8% Similarity=0.050 Sum_probs=25.3
Q ss_pred CcccccCCCcCccCcc-hhhhhhccccccccccCCC-Cccchh
Q psy5772 243 PAFVDSGTYPVQENPK-IVAVFLLEGIHQIKHLPPQ-GSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~-l~~~~~~~~~~~~~~~~~~-~~~~w~ 283 (654)
+.+.+..+|.+.+.++ ++ +.++ |++.+..+ ..++||
T Consensus 8 ~~~~al~dy~~~~~~e~Ls----f~~G-d~i~v~~~~~~~gW~ 45 (67)
T 3rnj_A 8 MRVKAIFSHAAGDNSTLLS----FKEG-DLITLLVPEARDGWH 45 (67)
T ss_dssp CEEEESSCBCCCSCTTBCC----BCTT-CEEEECSSSCBTTEE
T ss_pred eEEEEccccCCCCCCCCcc----CCCC-CEEEEeeccCCCCCE
Confidence 3567788888888776 88 7776 88877643 455565
No 221
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.68 E-value=15 Score=28.52 Aligned_cols=37 Identities=3% Similarity=0.015 Sum_probs=27.4
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCCcc-chh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSA-YWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~-~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ |++.+.....+ +||
T Consensus 17 ~~~~~Alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~~Ww 54 (81)
T 1x6g_A 17 GTQCITKCEHTRPKPGELA----FRKG-DVVTILEACENKSWY 54 (81)
T ss_dssp TCEEEESSCBSSCCTTCCC----BCTT-CEEEEEECCCSSSEE
T ss_pred CCEEEECCCCCcCCCCCCC----CCCC-CEEEEEeccCCCCeE
Confidence 3456788899999999988 7777 78777665443 566
No 222
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.42 E-value=22 Score=27.96 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=28.0
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 18 ~~~~Alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 53 (88)
T 1x2q_A 18 RKVRALYDFEAVEDNELT----FKHG-EIIIVLDDSDANWW 53 (88)
T ss_dssp EEEEESSCCCCCSSSCCC----CCSS-CEEEEEECSCSSSE
T ss_pred eEEEEcccCCCCCcCccC----CCCC-CEEEEEEeCCCCEE
Confidence 346778899999999998 7777 88887766666666
No 223
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=31.29 E-value=14 Score=26.64 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=26.5
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ +++.+......+||
T Consensus 7 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 42 (62)
T 3ngp_A 7 ELVLVLYDYQEKSPRELT----VKKG-DILTLLNSTNKDWW 42 (62)
T ss_dssp CEEEECSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEEECcCCCCCCCCCcc----CCCC-CEEEEeEecCCCeE
Confidence 345677889999999988 7777 77777666555566
No 224
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=30.90 E-value=15 Score=26.75 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=25.6
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCC--ccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--SAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~~~w~ 283 (654)
.+.+..+|.+...++++ +.+| |++.+.... .++||
T Consensus 8 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~W~ 44 (64)
T 2jte_A 8 YCRTLFPYTGTNEDELT----FREG-EIIHLISKETGEAGWW 44 (64)
T ss_dssp EEEESSCBCCSSSSBCC----BCTT-CEEEEEESCSSSTTEE
T ss_pred EEEECccCCccCCCccC----CCCC-CEEEEEECCCCCCCEE
Confidence 45677889999999998 7777 777776552 44555
No 225
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=30.79 E-value=25 Score=26.89 Aligned_cols=31 Identities=6% Similarity=0.063 Sum_probs=24.0
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCC
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG 278 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~ 278 (654)
..+.+..+|.+...++++ +.++ |++.+....
T Consensus 14 ~~~~Alydy~~~~~~eLs----~~~G-d~i~vl~~~ 44 (79)
T 1uhc_A 14 QVYFAVYTFKARNPNELS----VSAN-QKLKILEFK 44 (79)
T ss_dssp CCEEESSCBCCCSSSBCC----BCTT-CEEEEEESC
T ss_pred eEEEECccCCCCCCCccC----CCCC-CEEEEEECC
Confidence 356788899999999999 7777 777775554
No 226
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.74 E-value=15 Score=28.10 Aligned_cols=36 Identities=6% Similarity=-0.074 Sum_probs=27.3
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 8 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (78)
T 2yuo_A 8 RRAKALLDFERHDDDELG----FRKN-DIITIISQKDEHCW 43 (78)
T ss_dssp EEEEESSCBCCSSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred eEEEECccCCCCCCCCcc----CCCC-CEEEEEEecCCCEE
Confidence 345778899999999998 7777 78877766555565
No 227
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=30.72 E-value=21 Score=29.56 Aligned_cols=34 Identities=3% Similarity=-0.042 Sum_probs=27.5
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 8 ~~Alydy~a~~~~ELs----f~~G-d~i~vl~~~~~~Ww 41 (108)
T 2rqv_A 8 AIVLYDFKAEKADELT----TYVG-ENLFICAHHNCEWF 41 (108)
T ss_dssp EEESSCCCCCSSSBCC----CCSS-EEECCCCEETTTEE
T ss_pred EEECCCcCCCCCCcCC----cCCC-CEEEEeEecCCCEE
Confidence 4677899999999998 7777 88888777666666
No 228
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.69 E-value=26 Score=26.78 Aligned_cols=36 Identities=14% Similarity=0.007 Sum_probs=27.7
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ +++.+......+||
T Consensus 18 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 53 (79)
T 1x69_A 18 ITAVALYDYQAAGDDEIS----FDPD-DIITNIEMIDDGWW 53 (79)
T ss_dssp CCEEESSCCCCSSSSBCC----CCTT-CEEEEEEECSSSEE
T ss_pred eEEEECccCCCCCCCCcC----cCCC-CEEEEeEecCCCeE
Confidence 346788899999999998 7777 78877666556666
No 229
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.65 E-value=17 Score=26.94 Aligned_cols=35 Identities=6% Similarity=0.173 Sum_probs=26.3
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..+ +++.+.....+||.
T Consensus 9 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 43 (68)
T 1wxb_A 9 YVKILYDFTARNANELS----VLKD-EVLEVLEDGRQWWK 43 (68)
T ss_dssp CEECSSCBCCSSSSBCC----BCTT-CEEEEEECSSSEEE
T ss_pred EEEECccCCCCCCCccC----CCCC-CEEEEEEcCCCEEE
Confidence 45677889999999998 7777 77777666655555
No 230
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=30.48 E-value=15 Score=27.67 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=26.8
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +.++ +++.+......+||
T Consensus 6 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 41 (73)
T 3thk_A 6 ELVLALYDYQEKSPREVT----MKKG-DILTLLNSTNKDWW 41 (73)
T ss_dssp CEEEECSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEEECcCCCcCCCCccC----CCCC-CEEEEEECCCCCeE
Confidence 345678889999999988 7777 77777666555566
No 231
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=30.44 E-value=16 Score=27.40 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=26.7
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +..+ |++.+......+||
T Consensus 16 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 51 (73)
T 3h0h_A 16 TLFVALYDYEAITEDDLS----FHKG-EKFQILNSSEGDWW 51 (73)
T ss_dssp CEEEESSCBCCSSTTBCC----BCTT-CEEEEEECSSSSEE
T ss_pred EEEEECccCCCCCCCcce----EeCC-CEEEEEEecCCCeE
Confidence 456788899999999998 7777 77777665545555
No 232
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=30.39 E-value=16 Score=26.16 Aligned_cols=32 Identities=3% Similarity=0.100 Sum_probs=23.8
Q ss_pred cccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 246 VDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 246 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+..+|.+...++++ +..| +++.+... .++||
T Consensus 5 ~al~dy~~~~~~eLs----~~~G-d~i~v~~~-~~~Ww 36 (60)
T 1i07_A 5 KSKYDFVARNSSELS----VMKD-DVLEILDD-RRQWW 36 (60)
T ss_dssp EESSCBCCSSTTBCC----BCTT-CEEEECGG-GCCEE
T ss_pred EECccCCCCCCCccc----CCCC-CEEEEEEc-CCCeE
Confidence 466788898899988 7766 78777777 45555
No 233
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=30.37 E-value=13 Score=28.61 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=25.6
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 5 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 38 (80)
T 2pqh_A 5 VLALYDYQEKSPREVT----MKKG-DILTLLNSTNKDWW 38 (80)
T ss_dssp EEECSCBCCCSTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEECccCCCCCCCccC----CCCC-CEEEEEEecCCCEE
Confidence 4567788999999988 7777 78877666555566
No 234
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=30.27 E-value=14 Score=27.52 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=25.2
Q ss_pred cccccCCCc-CccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYP-VQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~-a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|. +...++++ +.+| |++.+.....++||
T Consensus 4 ~~~alydy~~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 39 (69)
T 1ruw_A 4 KFEAAYDFPGSGSSSELP----LKKG-DIVFISRDEPSGWS 39 (69)
T ss_dssp EEEESSCBCCCSCTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred EEEEccccCCCCCCCccc----CCCC-CEEEEEEecCCCeE
Confidence 456677885 88888888 7777 77777666555555
No 235
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=30.22 E-value=12 Score=28.84 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=26.4
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~gWw 43 (80)
T 1ue9_A 9 IAQVTSAYVASGSEQLS----LAPG-QLILILKKNTSGWW 43 (80)
T ss_dssp EEEECSCCCCCSTTBCC----CCTT-CEEEEEEECSSSEE
T ss_pred EEEECcccCCCCCCCCC----CCCC-CEEEEEEecCCCcE
Confidence 35677889999999998 7777 88877666555555
No 236
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=30.19 E-value=13 Score=27.06 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=25.5
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ +++.+......+||
T Consensus 8 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 42 (64)
T 4f14_A 8 TYRAMYDYSAQDEDEVS----FRDG-DYIVNVQPIDDGWM 42 (64)
T ss_dssp CEEESSCBCCCSTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred EEEECeeeCCcCCCcCC----CCCC-CEEEEEEeCCCCeE
Confidence 45677889999999988 7777 77777666555555
No 237
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=30.18 E-value=12 Score=26.60 Aligned_cols=33 Identities=12% Similarity=0.013 Sum_probs=24.5
Q ss_pred cccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 246 VDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 246 ~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+..+|.+...++++ +..+ +++.+......+||
T Consensus 5 ~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 37 (58)
T 4e6r_A 5 FVXFAYVAEREDELS----LVXG-SRVTVMEXCSDGWW 37 (58)
T ss_dssp EECSCBCCCSTTBCC----BCTT-CEEEEEEECTTSEE
T ss_pred EECccCCCCCCCEee----EeCC-CEEEEeEcCCCCEE
Confidence 456678888888888 7777 77777666666666
No 238
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=30.06 E-value=22 Score=26.88 Aligned_cols=36 Identities=6% Similarity=0.134 Sum_probs=27.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCC-ccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG-SAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~-~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.... ..+||
T Consensus 10 ~~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 46 (74)
T 1gbq_A 10 MEAIAKYDFKATADDELS----FKRG-DILKVLNEECDQNWY 46 (74)
T ss_dssp CEEEESSCBCCSSTTBCC----BCTT-CEEECCBCSSCSSEE
T ss_pred eEEEECccCCCCCCCeee----EcCC-CEEEEeEecCCCCEE
Confidence 345678889999999998 7777 888877665 44566
No 239
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.06 E-value=14 Score=27.49 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=26.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..+ |++.+......+||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~gW~ 43 (70)
T 2ct3_A 9 PYRAMYQYRPQNEDELE----LREG-DRVDVMQQCDDGWF 43 (70)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-EEEEEEEECSSSCE
T ss_pred EEEECccCCcCCcCCcc----CCCC-CEEEEEEECCCCEE
Confidence 45677889999999988 7777 78777666556666
No 240
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=29.99 E-value=24 Score=27.89 Aligned_cols=36 Identities=6% Similarity=0.044 Sum_probs=27.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCC--Cccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ--GSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~--~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+... ...+||
T Consensus 18 ~~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~Ww 55 (91)
T 1wx6_A 18 HVVQTLYPFSSVTEEELN----FEKG-ETMEVIEKPENDPEWW 55 (91)
T ss_dssp EEEEESSCCCCSSSSBCC----CCTT-CEEEEEECCSSCTTEE
T ss_pred EEEEEeecCCcCCCCccc----CCCC-CEEEEEECCCCCCCcE
Confidence 456788899999999999 7777 77777665 445555
No 241
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.76 E-value=19 Score=27.64 Aligned_cols=36 Identities=6% Similarity=-0.024 Sum_probs=26.5
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCc--cchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGS--AYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~--~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+..... .+||
T Consensus 18 ~~~~al~dy~~~~~~eLs----f~~G-d~i~v~~~~~~~~~Ww 55 (80)
T 2d8h_A 18 IEVTALYSFEGQQPGDLN----FQAG-DRITVISKTDSHFDWW 55 (80)
T ss_dssp EEEECSSCEECSSTTBCE----ECTT-CEEEEEECCSCSSSEE
T ss_pred EEEEECccCCcCCCCeee----EcCC-CEEEEeECcCCCCCeE
Confidence 345788899999999998 7777 7887766542 4455
No 242
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.50 E-value=15 Score=28.22 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=26.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 43 (79)
T 2yun_A 9 LCKALYSFQARQDDELN----LEKG-DIVIIHEKKEEGWW 43 (79)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEECCSSSCE
T ss_pred EEEECccCCcCCCCCcC----CCCC-CEEEEEEcCCCCEE
Confidence 45677889999999988 7777 77777666556666
No 243
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=29.44 E-value=15 Score=26.25 Aligned_cols=34 Identities=6% Similarity=0.025 Sum_probs=24.5
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCC-Cccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ-GSAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~-~~~~w~ 283 (654)
+.+..+|.+..+++++ +.++ |++.+... ..++||
T Consensus 5 ~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 39 (60)
T 2v1q_A 5 GIVQYDFMAESQDELT----IKSG-DKVYILDDKKSKDWW 39 (60)
T ss_dssp EEECSCBCCCSTTBCC----BCTT-CEEEEEESSSCSSEE
T ss_pred EEEeeeECCCCCCCcc----CCCC-CEEEEEeCCCCCCCE
Confidence 4567788999999988 7777 77777665 245555
No 244
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=29.44 E-value=17 Score=26.20 Aligned_cols=36 Identities=8% Similarity=0.095 Sum_probs=26.0
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCC-CCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPP-QGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~-~~~~~w~ 283 (654)
..+.+..+|.+...++++ +..+ +++.+.. ...++||
T Consensus 6 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~W~ 42 (63)
T 3eg3_A 6 NLFVALYDFVASGDNTLS----ITKG-EKLRVLGYNHNGEWC 42 (63)
T ss_dssp TEEEESSCBCCCSSSBCC----BCTT-CEEEEEEECTTSSEE
T ss_pred EEEEEcceECCCCCCccC----CCCC-CEEEEEEeCCCCCeE
Confidence 456778889999999988 7777 7776655 3345565
No 245
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.39 E-value=12 Score=28.87 Aligned_cols=35 Identities=9% Similarity=0.196 Sum_probs=27.0
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..+ +++.+.....++||
T Consensus 10 ~~~al~dy~~~~~~eLs----~~~G-d~i~vl~~~~~gWw 44 (80)
T 2ekh_A 10 SYMTCSAYQKVQDSEIS----FPAG-VEVQVLEKQESGWW 44 (80)
T ss_dssp EEEECSCBCCSSTTSCC----BCTT-CEEEEEEECTTSEE
T ss_pred EEEECCCCCCCCCCccC----cCCC-CEEEEEEeCCCCeE
Confidence 45678899999999998 7777 78877666666666
No 246
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=29.11 E-value=15 Score=27.34 Aligned_cols=34 Identities=9% Similarity=-0.054 Sum_probs=24.8
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCC---ccchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG---SAYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~---~~~w~ 283 (654)
+.+..+|.+...++++ +.+| |++.+.... ..+||
T Consensus 6 ~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~~Ww 42 (69)
T 1wyx_A 6 AKALYDNVAESPDELS----FRKG-DIMTVLEQDTQGLDGWW 42 (69)
T ss_dssp EEESSCBCCSSTTBCC----BCTT-CEEEEEETTGGGCTTEE
T ss_pred EEECccCCcCCCCccC----CcCC-CEEEEeECCCCCCCCcE
Confidence 3566788999999988 7777 777776654 45555
No 247
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.00 E-value=15 Score=27.34 Aligned_cols=35 Identities=11% Similarity=-0.076 Sum_probs=26.0
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCC---ccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG---SAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~---~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.... ..+||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~~Ww 46 (71)
T 2cre_A 9 LARALYDNCPDCSDELA----FSRG-DILTILEQHVPESEGWW 46 (71)
T ss_dssp EEEESSCCCCSSSSBCC----CCSS-CCEEEEESCCTTSTTEE
T ss_pred EEEECcccCcCCCCCCC----CCCC-CEEEEeEcCCCCCCCcE
Confidence 45677889999999998 7777 787776653 55555
No 248
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=28.91 E-value=18 Score=27.35 Aligned_cols=35 Identities=6% Similarity=-0.107 Sum_probs=26.4
Q ss_pred cccccCCCcCc--cCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQ--ENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~--~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+. ..++++ +.++ |++.+.....++||
T Consensus 11 ~~~alydy~~~~~~~~eLs----~~~G-d~i~v~~~~~~gWw 47 (73)
T 2ebp_A 11 RARVHTDFTPSPYDTDSLK----LKKG-DIIDIISKPPMGTW 47 (73)
T ss_dssp EEEECSCBCCCTTCCSBCC----BCSS-CEEEEEECCSSSCE
T ss_pred EEEEeeccCCCCCCCCccC----CCCC-CEEEEEEeCCCCeE
Confidence 45677788865 788888 7777 88888777667777
No 249
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=28.45 E-value=13 Score=27.56 Aligned_cols=33 Identities=9% Similarity=-0.162 Sum_probs=24.4
Q ss_pred cccCCCcCc--cCcchhhhhhccccccccccCCCCccchh
Q psy5772 246 VDSGTYPVQ--ENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 246 ~~~~~~~a~--~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+..+|.+. ..++++ +.++ |++.+.....++||
T Consensus 5 ~al~dy~~~~~~~~eLs----f~~G-d~i~v~~~~~~~Ww 39 (67)
T 2bzy_A 5 KAIQKRVPCAYDKTALA----LEVG-DIVKVTRMNINGQW 39 (67)
T ss_dssp EECSCBCSEEECTTBCC----BCTT-CEEEEEEECSSSEE
T ss_pred EEeeeECCCCCCCCccc----cCCC-CEEEEEEecCCCeE
Confidence 455677777 788888 7777 88888777666677
No 250
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.39 E-value=19 Score=27.82 Aligned_cols=36 Identities=6% Similarity=-0.005 Sum_probs=27.2
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 11 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 46 (81)
T 2ysq_A 11 VSAEAVWDHVTMANRELA----FKAG-DVIKVLDASNKDWW 46 (81)
T ss_dssp EEEEESSCCCCSSSSSCC----CCTT-CEEEEEECCSSSEE
T ss_pred eEEEEeeeECCCCCCcCC----CCCC-CEEEEEEEcCcCEE
Confidence 345778889999999988 7777 77777666556666
No 251
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=28.34 E-value=15 Score=27.31 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=26.5
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+...++++ +.++ |++.+.... ++||
T Consensus 9 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~-~~Ww 43 (69)
T 1uhf_A 9 EEYIALYPYSSVEPGDLT----FTEG-EEILVTQKD-GEWW 43 (69)
T ss_dssp EEEECSSCBCCSSSSBCC----BCTT-CEEEECEEE-TTEE
T ss_pred CEEEEeeeECCCCcCccC----CCCC-CEEEEEEeC-CCEE
Confidence 345778889999999998 7777 888887764 5555
No 252
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=28.23 E-value=17 Score=25.80 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=24.0
Q ss_pred ccccCCCcCccCcchhhhhhccccccccccCCCCc-cchh
Q psy5772 245 FVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGS-AYWD 283 (654)
Q Consensus 245 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~-~~w~ 283 (654)
+.+..+|.+..+++++ +.++ |++.+..... .+||
T Consensus 4 ~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~W~ 38 (58)
T 1zuu_A 4 NKVLYAYVQKDDDEIT----ITPG-DKISLVARDTGSGWT 38 (58)
T ss_dssp CEECSCBCCCSTTBCC----BCTT-CCEEEEECCSSSSEE
T ss_pred EEEeeeECCcCCCccc----CCCC-CEEEEeEcCCCCCCE
Confidence 3566788898889988 7777 7777755543 4555
No 253
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=28.05 E-value=18 Score=28.70 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=24.4
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCC
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ 277 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 277 (654)
...+.+..+|.+...++++ +..| |++.+...
T Consensus 29 ~~~~~Alydy~a~~~~ELs----f~~G-D~I~Vl~~ 59 (89)
T 2rf0_A 29 GPVWTAVFDYEAAGDEELT----LRRG-DRVQVLSQ 59 (89)
T ss_dssp CCEEEECSCBCCSSTTBCC----BCTT-CEEEEEEC
T ss_pred CcEEEECCccCCCCCCccc----cCCC-CEEEEEec
Confidence 3456788899999999998 7777 78777665
No 254
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=27.55 E-value=16 Score=27.04 Aligned_cols=35 Identities=3% Similarity=0.063 Sum_probs=26.1
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..+ +++.+.....+||.
T Consensus 9 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 43 (68)
T 1wxt_A 9 KMQVLYEFEARNPRELT----VVQG-EKLEVLDHSKRWWL 43 (68)
T ss_dssp EEEESSCBCCCSSSBCC----BCTT-CEEEEEECSSSEEE
T ss_pred EEEECceECCCCcCcCC----CCCC-CEEEEEEcCCCEEE
Confidence 45778889999999998 7777 77777666544554
No 255
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.50 E-value=15 Score=27.32 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=26.1
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCC--ccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--SAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.... .++||
T Consensus 8 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~W~ 45 (70)
T 2da9_A 8 DYCKVIFPYEAQNDDELT----IKEG-DIVTLINKDCIDVGWW 45 (70)
T ss_dssp EEEEECSCCCCSSTTBCC----CCTT-EEEEEEECCCSSTTEE
T ss_pred cEEEECcCCCCCCcCEee----EcCC-CEEEEEECCCCCCCeE
Confidence 345678889999999998 7777 777776552 44555
No 256
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.50 E-value=22 Score=26.44 Aligned_cols=37 Identities=11% Similarity=0.011 Sum_probs=26.7
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCC-ccchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG-SAYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~-~~~w~ 283 (654)
.+.+.+..+|.+...++++ +.++ +++.+.... ..|||
T Consensus 7 ~~~~~alydy~~~~~~eLs----~~~G-d~i~vl~~~~~~gW~ 44 (70)
T 2ct4_A 7 GGHCVAIYHFEGSSEGTIS----MAEG-EDLSLMEEDKGDGWT 44 (70)
T ss_dssp SCEEEESSCBCCCSTTCCC----BCTT-CEEEEEECCSSSCEE
T ss_pred CCEEEEcccCCCCCCCcCC----CCCC-CEEEEEeccCCCCeE
Confidence 3456788899999999998 7777 777665543 45455
No 257
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.33 E-value=17 Score=27.34 Aligned_cols=35 Identities=9% Similarity=-0.044 Sum_probs=26.0
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCC---Cccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQ---GSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~---~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+... ..++||
T Consensus 10 ~~~alydy~~~~~~eLs----f~~G-d~i~v~~~~~~~~~~Ww 47 (73)
T 2dl7_A 10 FVKALYDYEGQTDDELS----FPEG-AIIRILNKENQDDDGFW 47 (73)
T ss_dssp EEEESSCBCCSSTTBCC----BCTT-CEEEEEECCCSSSSSCE
T ss_pred EEEECccCCcCCCCcCC----CCCC-CEEEEEECCCCCCCCcE
Confidence 45778889999999998 7777 78877655 345555
No 258
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.68 E-value=16 Score=27.76 Aligned_cols=35 Identities=9% Similarity=0.083 Sum_probs=26.4
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+.+.+..+|.+. .++++ +.++ |++.+..+...+||
T Consensus 11 ~~~~alydy~~~-~~eLs----~~~G-d~i~vl~~~~~gWw 45 (75)
T 2egc_A 11 DVYVSIADYEGD-EETAG----FQEG-VSMEVLERNPNGWW 45 (75)
T ss_dssp EEEEECSCBCCC-SSSCC----BCTT-CEEEECEECTTSEE
T ss_pred eEEEECCCcCCC-CCcCC----CCCC-CEEEEEEcCCCCeE
Confidence 345778889998 88888 7777 88888777666565
No 259
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=26.54 E-value=13 Score=27.01 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=26.3
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..+ +++.+.....++||
T Consensus 9 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~W~ 43 (65)
T 3u23_A 9 QCKVLFEYIPQNEDELE----LKVG-DIIDINEEVEEGWW 43 (65)
T ss_dssp EEEECSCBCCSSTTBCC----BCTT-CEEEEEEEEETTEE
T ss_pred EEEEeeeeCCCCcCCcC----CCCC-CEEEEEEecCCCEE
Confidence 45677889999899988 7777 77777666656666
No 260
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=26.44 E-value=19 Score=28.15 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=26.4
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +..| +++.+.....++||
T Consensus 7 ~~~~Alydy~a~~~~eLs----f~~G-d~i~vl~~~~~~Ww 42 (84)
T 4ag1_C 7 TLFVALYDYNATRWTDLS----FHKG-EKFQILEFGPGDWW 42 (84)
T ss_dssp CEEEESSCBCCSBTTBCC----BCTT-CEEEEEECCSSSEE
T ss_pred EEEEEcccCCCCCCCccc----ccCC-CEEEEEEecCCCeE
Confidence 446777889999999988 7777 77777666555555
No 261
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.26 E-value=13 Score=27.95 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=26.9
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ +++.+......+||
T Consensus 11 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 45 (72)
T 2dl8_A 11 EAIAKFDYVGRTARELS----FKKG-ASLLLYQRASDDWW 45 (72)
T ss_dssp EEEESSCBCCSSSSBCC----BCTT-CEEEEEEEEETTEE
T ss_pred EEEECccCCcCCCCEec----cCCC-CEEEEEeecCCCEE
Confidence 45778889999999998 7777 88877766555666
No 262
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.75 E-value=23 Score=28.45 Aligned_cols=35 Identities=9% Similarity=0.179 Sum_probs=27.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 36 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 70 (98)
T 1udl_A 36 QVIAMYDYAANNEDELS----FSKG-QLINVMNKDDPDWW 70 (98)
T ss_dssp EEEESSCCCCSSTTSCC----CCTT-CEEEECBCCSSSEE
T ss_pred EEEECCCCCCCCCCccC----CcCC-CEEEEEEecCCCEE
Confidence 45678899999999999 7777 88888777666666
No 263
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=25.52 E-value=31 Score=27.32 Aligned_cols=32 Identities=6% Similarity=0.020 Sum_probs=25.4
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCc
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGS 279 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~ 279 (654)
..+.+..+|.+...++++ +.++ |++.+.....
T Consensus 18 ~~~~alydy~a~~~~eLs----f~~G-d~i~v~~~~~ 49 (93)
T 1wxu_A 18 VVARAEYDFVAVSDEEIS----FRAG-DMLNLALKEQ 49 (93)
T ss_dssp BCEEESSCBCCSSSSBCC----BCSS-CBCEECCTTT
T ss_pred EEEEECccCCCCCCCccC----cCCC-CEEEEEECCC
Confidence 356788899999999999 7777 8888776654
No 264
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=25.27 E-value=18 Score=27.12 Aligned_cols=35 Identities=14% Similarity=0.273 Sum_probs=25.7
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....+||.
T Consensus 9 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 43 (72)
T 2jw4_A 9 VVVAKFDYVAQQEQELD----IKKN-ERLWLLDDSKSWWR 43 (72)
T ss_dssp EEECSSCCCCSSTTSCC----CCTT-CEEEEEECSSSSEE
T ss_pred EEEECcCCCcCCCCccc----CCCC-CEEEEEECCCCEEE
Confidence 45677889999999988 7777 77777666554444
No 265
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.57 E-value=11 Score=28.70 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=27.5
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 11 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 46 (76)
T 2epd_A 11 VEAVACFAYTGRTAQELS----FRRG-DVLRLHERASSDWW 46 (76)
T ss_dssp EEEEESSCEECSSTTBCE----ECTT-CEEEEEEEEETTEE
T ss_pred EEEEECcCCCCCCCCccC----CCCC-CEEEEEEeCCCCEE
Confidence 345778899999999998 7777 88888776556666
No 266
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=24.55 E-value=19 Score=28.27 Aligned_cols=35 Identities=11% Similarity=0.299 Sum_probs=26.2
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..| |++.+.....+||.
T Consensus 33 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 67 (86)
T 2jxb_A 33 IVIAKWDYTAQQDQELD----IKKN-ERLWLLDDSKTWWR 67 (86)
T ss_dssp EEEESSCCCCCSSSBCC----CCTT-EEEEEEECCSSEEE
T ss_pred EEEECccCCCCCCCEec----cCCC-CEEEEEecCCCeEE
Confidence 45678899999999998 7777 77777666554454
No 267
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=24.34 E-value=31 Score=28.76 Aligned_cols=36 Identities=11% Similarity=0.203 Sum_probs=27.7
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCC-----CCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPP-----QGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.+| |++.+.. ...++||
T Consensus 45 ~~~~Alydy~a~~~dELs----f~~G-DiI~Vl~~~~~~~~~~gWw 85 (115)
T 1bb9_A 45 FKVQAQHDYTATDTDELQ----LKAG-DVVLVIPFQNPEEQDEGWL 85 (115)
T ss_dssp EEEEESSCBCCSSTTBCC----BCTT-CEEEEECCSCGGGCCTTEE
T ss_pred eEEEECCccCCCCCCccC----cCCC-CEEEEeeccCCcccCCCeE
Confidence 346788899999999999 7777 8887766 5556666
No 268
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=24.18 E-value=25 Score=26.06 Aligned_cols=30 Identities=20% Similarity=0.161 Sum_probs=19.1
Q ss_pred CCCcCccCcchhhhhhccccccccccCCC-Cccchh
Q psy5772 249 GTYPVQENPKIVAVFLLEGIHQIKHLPPQ-GSAYWD 283 (654)
Q Consensus 249 ~~~~a~~~~~l~~~~~~~~~~~~~~~~~~-~~~~w~ 283 (654)
.++.+...++++ +.++ |++.+..+ ...+||
T Consensus 17 ~~~~~~~~~eLs----f~~G-d~i~v~~~~~~~~Ww 47 (70)
T 1gcq_C 17 PPPPGAFGPFLR----LNPG-DIVELTKAEAEHNWW 47 (70)
T ss_dssp SCCGGGCSCBCC----BCTT-CEEEEEECCTTCSEE
T ss_pred CCCCCCCCCcCC----cCCC-CEEEEEeCCCCCCCe
Confidence 334444555777 7777 88888766 455666
No 269
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=23.83 E-value=16 Score=26.63 Aligned_cols=35 Identities=9% Similarity=0.014 Sum_probs=25.8
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.... ++||
T Consensus 8 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~-~~Ww 42 (65)
T 1w1f_A 8 DIVVALYPYDGIHPDDLS----FKKG-EKMKVLEEH-GEWW 42 (65)
T ss_dssp EEEEESSCBCCCSSSCCC----BCTT-CEEEEEEEC-SSEE
T ss_pred CEEEEceeECCcCCCcCC----CCCC-CEEEEEEcC-CCEE
Confidence 345677889999999988 7777 777776666 5555
No 270
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=23.46 E-value=34 Score=27.36 Aligned_cols=35 Identities=9% Similarity=-0.024 Sum_probs=25.4
Q ss_pred cccccCCCcCcc------CcchhhhhhccccccccccC-CCCccchh
Q psy5772 244 AFVDSGTYPVQE------NPKIVAVFLLEGIHQIKHLP-PQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~------~~~l~~~~~~~~~~~~~~~~-~~~~~~w~ 283 (654)
.+.+..+|.+.. .++++ +.++ |++.+. .....+||
T Consensus 19 ~~~Alydy~~~~~~~~~~~~eLs----f~~G-d~i~v~~~~~~~gWw 60 (96)
T 1wie_A 19 LCVARYSYNPFDGPNENPEAELP----LTAG-KYLYVYGDMDEDGFY 60 (96)
T ss_dssp EEEESSCCCGGGSSCSCTTTBCC----CCTT-CEEEEESSCCSSSCC
T ss_pred EEEECCccCCCcccCCCCCCeee----ECCC-CEEEEeEecCCCCEE
Confidence 456778888877 77887 7777 788776 65566666
No 271
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=23.36 E-value=97 Score=25.56 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=25.1
Q ss_pred ccccCCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCC
Q psy5772 603 PVISSSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTD 648 (654)
Q Consensus 603 ~l~~~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD 648 (654)
+.+...+..+++|.|.... .. .+.|..+|++|.+|
T Consensus 10 ~~~~~~~~~~~~G~L~K~g--------~~---~~~Wk~R~fvL~~d 44 (129)
T 1x1g_A 10 STVELSGTVVKQGYLAKQG--------HK---RKNWKVRRFVLRKD 44 (129)
T ss_dssp CCCTTCSEEEEEEEEEEEC--------SS---SSSEEEEEEEEEES
T ss_pred cccccCCCEEEEEEEEEEC--------CC---CCCeeeEEEEEeCC
Confidence 3355678999999999773 11 23466889999955
No 272
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.85 E-value=19 Score=28.38 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=26.9
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+......+||
T Consensus 19 ~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~gWw 53 (88)
T 2cub_A 19 PAYVKFNYMAEREDELS----LIKG-TKVIVMEKCSDGWW 53 (88)
T ss_dssp EEEESSCCCCCSTTBCC----CCTT-EEEEEEEECTTSEE
T ss_pred EEEEccccCCCCCCCcC----CCCC-CEEEEEEccCCCeE
Confidence 35678889999999998 7777 88877776555566
No 273
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.24 E-value=21 Score=27.38 Aligned_cols=36 Identities=8% Similarity=0.218 Sum_probs=26.7
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....+||.
T Consensus 18 ~~~~Alydy~a~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 53 (79)
T 2cud_A 18 DFLAVLSDYPSPDISPPI----FRRG-EKLRVISDEGGWWK 53 (79)
T ss_dssp CEEEESSCSSCTTTSCCS----SCTT-CEEEEEEEETTEEE
T ss_pred eEEEEccCCCCCCCCcCC----CCCC-CEEEEEecCCCeEE
Confidence 356788899999999988 7777 77777665444554
No 274
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=22.22 E-value=24 Score=26.58 Aligned_cols=36 Identities=8% Similarity=0.149 Sum_probs=26.6
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....+||.
T Consensus 11 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~Ww~ 46 (74)
T 1j3t_A 11 LKAQALCSWTAKKDNHLN----FSKH-DIITVLEQQENWWF 46 (74)
T ss_dssp CEEEESSCBCCCSTTBCC----BCTT-CEEEEEEECSSEEE
T ss_pred eEEEECCCCCCCCCCccC----CCCC-CEEEEEecCCCEEE
Confidence 345778889999999988 7777 78877666544454
No 275
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.04 E-value=27 Score=27.18 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=27.1
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 21 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 55 (85)
T 2yuq_A 21 VVIALYDYQTNDPQELA----LRRN-EEYCLLDSSEIHWW 55 (85)
T ss_dssp EEEESSCCCCSCSSBCC----CCBT-EEEEEEECCSSSEE
T ss_pred EEEECcCCCCCCCCcCC----CCCC-CEEEEEEecCCCeE
Confidence 46788899999999998 7777 78777666655566
No 276
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.94 E-value=29 Score=27.55 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=27.8
Q ss_pred CCcccccCCCcCccCcchhhhhhccccccccccCCCC--c--cchh
Q psy5772 242 VPAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG--S--AYWD 283 (654)
Q Consensus 242 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~--~--~~w~ 283 (654)
...+.+..+|.+...++++ +.++ |++.+.... . ++||
T Consensus 16 ~~~~~Alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~~~gWw 56 (94)
T 2e5k_A 16 HETLQVIYPYTPQNDDELE----LVPG-DFIFMSPMEQTSTSEGWI 56 (94)
T ss_dssp CEEEEECSCBCCSSSSBCC----BCTT-CEEEECGGGCCSTTTTEE
T ss_pred CeEEEECCcCCCCCCCCcC----CCCC-CEEEEEECcCCCCCCCcE
Confidence 3456788999999999999 7777 888876652 2 5666
No 277
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=21.93 E-value=27 Score=28.57 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=27.4
Q ss_pred CcccccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 243 PAFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 243 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
..+.+..+|.+...++++ +.++ |++.+.....++||
T Consensus 28 ~~~~al~dy~~~~~~eLs----~~~G-d~i~v~~~~~~~Ww 63 (109)
T 2yt6_A 28 TIFVALYDYEARTTEDLS----FKKG-ERFQIINNTEGDWW 63 (109)
T ss_dssp CEEEESSCCCCSSTTSCC----CCTT-CEEEEEECSCTTCE
T ss_pred EEEEECccCCCCCCCccC----CCCC-CEEEEEEccCCCcE
Confidence 456788899999999988 7777 78877666555565
No 278
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.47 E-value=62 Score=26.11 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=24.5
Q ss_pred CCceEEEEeeeEEEeccccchhhcccccccccceEEEEecCCeeec
Q psy5772 607 SSRWLVRSGSMNFVNVDSKMTFARKLNKTHFYAKLNLFLFTDLHPV 652 (654)
Q Consensus 607 ~~R~Li~~G~l~~~~~~~~~~~~~k~~~~~~~~~~~lfLFnD~Lli 652 (654)
++...+++|.|.... . ..+.|..+|++|.++.|.+
T Consensus 4 ~~~~~~~~G~L~K~~--------~---~~~~Wk~R~fvL~~~~L~y 38 (115)
T 2dn6_A 4 GSSGVLKQGYMMKKG--------H---RRKNWTERWFVLKPNIISY 38 (115)
T ss_dssp CCCSCSEEEEEEEEC--------T---TSSCEEEEEEEECSSCEEE
T ss_pred CCCCceEEEEEEecC--------C---CCCCcEEeEEEEECCEEEE
Confidence 445668899998763 1 1134668899999998865
No 279
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.38 E-value=29 Score=26.22 Aligned_cols=35 Identities=6% Similarity=0.067 Sum_probs=24.3
Q ss_pred cccccCCCcCcc-------CcchhhhhhccccccccccCC-CCccchh
Q psy5772 244 AFVDSGTYPVQE-------NPKIVAVFLLEGIHQIKHLPP-QGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~-------~~~l~~~~~~~~~~~~~~~~~-~~~~~w~ 283 (654)
.+.+..+|.+.. .++++ +.++ |++.+.. ...++||
T Consensus 9 ~~~Alydy~~~~~~~~~~~~~eLs----f~~G-d~i~v~~~~~~~gWw 51 (75)
T 2ege_A 9 IMIAALDYDPGDGQMGGQGKGRLA----LRAG-DVVMVYGPMDDQGFY 51 (75)
T ss_dssp EEEESSCBCTTTTCCCSSSCCBCC----BCTT-CEEEEESCCCTTCEE
T ss_pred EEEECCCCCCCccccCCCCCCcce----ECCC-CEEEEeEccCCCCEE
Confidence 346677788877 77888 7777 7887765 3555666
No 280
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.37 E-value=22 Score=27.90 Aligned_cols=35 Identities=9% Similarity=-0.172 Sum_probs=26.3
Q ss_pred cccccCCCc--CccCcchhhhhhccccccccccCCCCccchh
Q psy5772 244 AFVDSGTYP--VQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~--a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
.+.+..+|. +...++++ +.++ |++.+..+..++||
T Consensus 18 ~~~alydy~~~a~~~~eLs----f~~G-d~i~v~~~~~~~Ww 54 (88)
T 2dbk_A 18 FAKAIQKRVPCAYDKTALA----LEVG-DIVKVTRMNINGQW 54 (88)
T ss_dssp EEEECSCBCCCTTCSSBCC----BCTT-CEEEEEEECTTSCE
T ss_pred EEEEcccccCCCCCCCccc----CCCC-CEEEEEEecCCCEE
Confidence 456777888 44888888 7777 88888777667677
No 281
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=21.11 E-value=31 Score=32.32 Aligned_cols=35 Identities=11% Similarity=0.245 Sum_probs=27.2
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCC-----CCccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPP-----QGSAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~w~ 283 (654)
.+.+..+|.+...++++ +..| |++.+.. ...++||
T Consensus 144 ~~rALYdY~a~~~dELS----f~~G-DiI~Vl~~~~~~~~ddgWw 183 (213)
T 1mv3_A 144 KVQAQHDYTATDTDELQ----LKAG-DVVLVIPFQNPEEQDEGWL 183 (213)
T ss_dssp EEEESSCBCCCSTTCCC----BCSS-CEEEECCCSCGGGSCTTEE
T ss_pred EEEECCCcCCCCCCcCC----cCCC-CEEEEeecCCCCccCCCee
Confidence 35678899999999998 7777 8888877 5556666
No 282
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.85 E-value=25 Score=26.88 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=26.2
Q ss_pred cccccCCCcCccCcchhhhhhccccccccccCCCC-ccchh
Q psy5772 244 AFVDSGTYPVQENPKIVAVFLLEGIHQIKHLPPQG-SAYWD 283 (654)
Q Consensus 244 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~-~~~w~ 283 (654)
.+.+..+|.+...++++ +.++ +++.+.... ..+||
T Consensus 15 ~~~alydy~~~~~~eLs----~~~G-d~i~v~~~~~~~~Ww 50 (78)
T 2dl5_A 15 TCKVVYSYKASQPDELT----IEEH-EVLEVIEDGDMEDWV 50 (78)
T ss_dssp EEEECSCBCCCSTTBCC----BCSS-EEEEEEECCSSSSEE
T ss_pred EEEEceeECCCCCCCCC----CCCC-CEEEEEeccCCCCcE
Confidence 45778899999999998 7777 777776664 24555
No 283
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=20.68 E-value=26 Score=26.31 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=22.0
Q ss_pred ccCCCcCccCcchhhhhhccccccccccCCCCccchh
Q psy5772 247 DSGTYPVQENPKIVAVFLLEGIHQIKHLPPQGSAYWD 283 (654)
Q Consensus 247 ~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~w~ 283 (654)
+..+|.+ +.++++ +.+| +++.+.....++||
T Consensus 5 alydy~~-~~~eLs----~~~G-d~i~v~~~~~~~Ww 35 (73)
T 2kxd_A 5 PLPPYSA-GGREVT----MKKG-DILTLLNSTNKDWW 35 (73)
T ss_dssp CCCSSCC-CSCCCC----BCTT-CEEEEEECCSSSEE
T ss_pred EeeeeCC-CCCEee----EcCC-CEEEEEEecCCCEE
Confidence 4556777 777888 7777 88877766566666
Done!