BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5780
(106 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195375225|ref|XP_002046402.1| GJ12523 [Drosophila virilis]
gi|194153560|gb|EDW68744.1| GJ12523 [Drosophila virilis]
Length = 220
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+EREVDF EA +M +Y+PEI +VMETSAK++TNVE+AF CLA ELK++ A+
Sbjct: 133 GNKCDLEAEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCLATELKHQHDASS 192
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCN 105
E N D+ + S KS + CN
Sbjct: 193 VQE--NLDDNTVQLGQSKPLKSCSSSCN 218
>gi|195135342|ref|XP_002012093.1| GI16780 [Drosophila mojavensis]
gi|193918357|gb|EDW17224.1| GI16780 [Drosophila mojavensis]
Length = 219
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDLESEREVDF EA +M +Y+PEI +VMETSAK++TNVE+AF CLA ELK + ++
Sbjct: 133 GNKCDLESEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCLATELKRQHDSS 191
>gi|195137528|ref|XP_002012570.1| GI18299 [Drosophila mojavensis]
gi|193906585|gb|EDW05452.1| GI18299 [Drosophila mojavensis]
Length = 122
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLESEREVDF EA +M +Y+PEI +VMETSAK++TNVE+AF CLA ELK + +
Sbjct: 34 LIGNKCDLESEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCLATELKRQHDS 93
Query: 76 T 76
+
Sbjct: 94 S 94
>gi|195325951|ref|XP_002029694.1| GM25038 [Drosophila sechellia]
gi|194118637|gb|EDW40680.1| GM25038 [Drosophila sechellia]
Length = 219
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDLE +REVDF EA +M +Y+PEI +VMETSAK++ NVE+AF CLANELK + A
Sbjct: 133 GNKCDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDA 190
>gi|17737545|ref|NP_523970.1| Rab19, isoform A [Drosophila melanogaster]
gi|442630989|ref|NP_001261575.1| Rab19, isoform B [Drosophila melanogaster]
gi|194865952|ref|XP_001971685.1| GG14295 [Drosophila erecta]
gi|195491260|ref|XP_002093486.1| GE20724 [Drosophila yakuba]
gi|195588689|ref|XP_002084090.1| GD14074 [Drosophila simulans]
gi|2313047|dbj|BAA21712.1| rab-related protein 3 [Drosophila melanogaster]
gi|7295127|gb|AAF50452.1| Rab19, isoform A [Drosophila melanogaster]
gi|17945955|gb|AAL49022.1| RE48347p [Drosophila melanogaster]
gi|190653468|gb|EDV50711.1| GG14295 [Drosophila erecta]
gi|194179587|gb|EDW93198.1| GE20724 [Drosophila yakuba]
gi|194196099|gb|EDX09675.1| GD14074 [Drosophila simulans]
gi|220948860|gb|ACL86973.1| Rab-RP3-PA [synthetic construct]
gi|440215482|gb|AGB94270.1| Rab19, isoform B [Drosophila melanogaster]
Length = 219
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDLE +REVDF EA +M +Y+PEI +VMETSAK++ NVE+AF CLANELK + A
Sbjct: 133 GNKCDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDA 190
>gi|125980342|ref|XP_001354195.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|195167530|ref|XP_002024586.1| GL22545 [Drosophila persimilis]
gi|54642500|gb|EAL31247.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|194107991|gb|EDW30034.1| GL22545 [Drosophila persimilis]
Length = 219
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDLE+EREVDF EA +M +Y+PEI +VMETSAK++ NVE+AF CLA ELK + A
Sbjct: 133 GNKCDLETEREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLATELKRQHDA 190
>gi|157116294|ref|XP_001652810.1| rab 19, 41 and [Aedes aegypti]
gi|108876535|gb|EAT40760.1| AAEL007525-PA [Aedes aegypti]
Length = 219
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 6/80 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NKCDL++ REV+F EA+ M +Y+PEI +VMETSAKD+ N+E+AF LA ELK R
Sbjct: 131 VIGNKCDLDAIREVEFAEAQTMCQYIPEIMFVMETSAKDNRNIEDAFMTLATELKRR--- 187
Query: 76 TLCNEPINTDNTNSPITLSN 95
++ I+ D+T ITL
Sbjct: 188 ---HDNISADDTTDGITLGQ 204
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL+ EREVDF EA +M +Y+PEI +VMETSAK + NVE+AF CLA ELK + A
Sbjct: 133 GNKCDLDEEREVDFEEARQMCQYIPEILFVMETSAKSNMNVEDAFRCLATELKRQHDA-- 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCN 105
N D+ + S KS + CN
Sbjct: 191 -NNVQEVDDHTITLGQSKPLKSCSSSCN 217
>gi|91086487|ref|XP_970606.1| PREDICTED: similar to rab 19, 41 and [Tribolium castaneum]
gi|270009806|gb|EFA06254.1| hypothetical protein TcasGA2_TC009113 [Tribolium castaneum]
Length = 221
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 6/88 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D+ES REV+F EAE M +Y+PE+ +V+E SAKD++N+EEAF CLA ELK R
Sbjct: 133 GNKADMESLREVEFEEAEAMCQYMPEVLFVLEASAKDNSNIEEAFLCLATELKRRHD--- 189
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCN 105
N + D+ + + L D++++ KC+
Sbjct: 190 -NGMLGNDDDDDTVKL-GDSRAV-TKCS 214
>gi|170027760|ref|XP_001841765.1| rab 19 [Culex quinquefasciatus]
gi|167862335|gb|EDS25718.1| rab 19 [Culex quinquefasciatus]
Length = 219
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 7/92 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NK DL++ REV+F EA+ M +Y+PEI +VMETSAKD+ N+E+AF LA ELK R
Sbjct: 131 VVGNKSDLDAIREVEFAEAQTMCQYIPEIMFVMETSAKDNRNIEDAFMTLATELKRR--- 187
Query: 76 TLCNEPINTDNTNSPITLSND-TKSIRNKCNC 106
++ I TD+ ITL T S+ N C
Sbjct: 188 ---HDNITTDDVPDGITLGQGMTLSVSNCSLC 216
>gi|242004508|ref|XP_002423125.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212506071|gb|EEB10387.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 210
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE+ REV+F+EAE M E++PE+ V+E SAK++TN+E+AF CLA ELK R +L
Sbjct: 122 GNKSDLENLREVEFSEAEAMCEFIPEVLCVLEASAKENTNIEDAFLCLATELKRRHDVSL 181
Query: 78 CNEPINTDNTNSPITL 93
C D S I+L
Sbjct: 182 C----LGDGDKSTISL 193
>gi|289741111|gb|ADD19303.1| Rab-related protein 3 [Glossina morsitans morsitans]
Length = 219
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 45/55 (81%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DLE EREVDF+EA++M +Y+PE+ +V+ETSAK++ NV++AF LA ELK R
Sbjct: 133 GNKSDLEEEREVDFDEAQQMCQYIPEVLFVIETSAKENLNVDDAFVTLATELKRR 187
>gi|31199429|ref|XP_308662.1| AGAP007096-PA [Anopheles gambiae str. PEST]
gi|21291806|gb|EAA03951.1| AGAP007096-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NK DL+ EREV+F+EAE + +Y+PE+ +VMETSAKD+ V++AF LA ELK R
Sbjct: 131 VIGNKSDLDEEREVEFSEAENLCQYIPEVMFVMETSAKDNRCVDDAFMTLATELKRR--- 187
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCN 105
++ +N ITL N CN
Sbjct: 188 ---HDGLNAAEEEEGITLGQSKSLSTNTCN 214
>gi|312380644|gb|EFR26581.1| hypothetical protein AND_07236 [Anopheles darlingi]
Length = 199
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
V NK DL+S REV+F+EA+ M +Y+PE+ +VMETSAKD+ VE+AF LA ELK R
Sbjct: 133 VIGNKSDLDSIREVEFSEAQAMCQYIPEVMFVMETSAKDNRFVEDAFMTLATELKVR 189
>gi|345492946|ref|XP_003426961.1| PREDICTED: ras-related protein Rab-43-like [Nasonia vitripennis]
Length = 221
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE REV EAE + EY+PE+ ++ETSAK++TN++ F+CLA+ELK R
Sbjct: 134 GNKCDLEDAREVQKAEAEAVCEYLPEVFRIVETSAKENTNIDSIFFCLASELKRRHE--- 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
N +NT+ N + L N RN +C
Sbjct: 191 -NRQVNTEE-NDTVKLGNG----RNLSSC 213
>gi|193713749|ref|XP_001945092.1| PREDICTED: ras-related protein Rab-43-like isoform 1 [Acyrthosiphon
pisum]
gi|328718639|ref|XP_003246535.1| PREDICTED: ras-related protein Rab-43-like isoform 2 [Acyrthosiphon
pisum]
Length = 235
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR--QSA 75
NKCDLE R+V+ +EA+ M EY PE+ V+ETSAK++ N+EEAF +A+ELK R QSA
Sbjct: 149 GNKCDLEENRQVELSEADAMCEYFPELLSVLETSAKENKNIEEAFVTIASELKRRHDQSA 208
Query: 76 TLCNEP 81
+ +EP
Sbjct: 209 HIEDEP 214
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDLE+ REV EAE + EY+PE+ +V+ETSAKD+TN++ F+ LA+ELK R
Sbjct: 135 GNKCDLENLREVQKAEAEALCEYLPEVLHVVETSAKDNTNIDSIFFYLASELKRRH 190
>gi|307192561|gb|EFN75749.1| Ras-related protein Rab-43 [Harpegnathos saltator]
Length = 215
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDLE REV EAE + EY+PE+ +++ETSAKD+TN++ F+ LA+ELK R
Sbjct: 133 GNKCDLEDLREVKKEEAEALCEYLPEVLHIVETSAKDNTNIDTIFFYLASELKRRH 188
>gi|380025950|ref|XP_003696725.1| PREDICTED: ras-related protein Rab-43-like [Apis florea]
Length = 219
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDLES REV+ EAE + +Y+PE+ V+ETSAK++TN++ F+ LA+ELK R
Sbjct: 132 GNKCDLESLREVEKGEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLASELKRR 186
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD+++ REV+ EA M E +PEI V+ETSAKD+TNVE+AF LA ELK Q
Sbjct: 129 GNKCDMDTLREVEQVEALAMAELIPEIVLVLETSAKDNTNVEQAFVELATELKRNQ 184
>gi|340714578|ref|XP_003395804.1| PREDICTED: ras-related protein Rab-43-like [Bombus terrestris]
gi|350411163|ref|XP_003489259.1| PREDICTED: ras-related protein Rab-43-like [Bombus impatiens]
Length = 219
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDLES REV+ EAE + +Y+PE+ V+ETSAK++TN++ F+ LA ELK R
Sbjct: 132 GNKCDLESLREVEKGEAEALCQYLPEVLQVVETSAKENTNIDSVFFYLAAELKRRH 187
>gi|195012308|ref|XP_001983578.1| GH15503 [Drosophila grimshawi]
gi|193897060|gb|EDV95926.1| GH15503 [Drosophila grimshawi]
Length = 219
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE EREVDF EA +M +Y+PEI +VMETSAK++TNVE+AF CLA ELK + +
Sbjct: 133 GNKCDLEEEREVDFEEARQMCQYIPEILFVMETSAKENTNVEDAFRCLATELKRQHDS-- 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCN 105
N D+ + S KS + CN
Sbjct: 191 -NSVQAIDDNTVQLGQSKPLKSCSSSCN 217
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDLE REV EAE + +Y+PE+ +V+ETSAKD+TN++ F+ LA+ELK R
Sbjct: 125 GNKCDLEDLREVKEIEAEALCQYLPEVLHVVETSAKDNTNIDSIFFYLASELKRRH 180
>gi|383854352|ref|XP_003702685.1| PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Megachile
rotundata]
Length = 630
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NKCDLE REV+ EAE + +Y+PE+ V+ETSAK++TN++ F+ LA+ELK R
Sbjct: 544 NKCDLEDLREVEKEEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLASELKRRHE---- 599
Query: 79 NEPINTD 85
N IN +
Sbjct: 600 NRQINAN 606
>gi|66508944|ref|XP_624576.1| PREDICTED: ras-related protein Rab-43 [Apis mellifera]
Length = 219
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDLE+ REV+ EAE + +Y+PE+ V+ETSAK++TN++ F+ LA+ELK R
Sbjct: 132 GNKCDLENLREVEKGEAEALCQYLPEVLQVVETSAKENTNIDSIFFYLASELKRR 186
>gi|194752067|ref|XP_001958344.1| GF10872 [Drosophila ananassae]
gi|190625626|gb|EDV41150.1| GF10872 [Drosophila ananassae]
Length = 219
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 60/91 (65%), Gaps = 9/91 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA-T 76
NKCDLE EREVDF EA +M +Y+PEI +VMETSAK++ NVE+AF CLA ELK + A T
Sbjct: 133 GNKCDLEEEREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLATELKRQHDANT 192
Query: 77 LCNEPINTDNTNSPITLSND--TKSIRNKCN 105
+ + P NT ITL KS + CN
Sbjct: 193 VEDVPENT------ITLGQGKPLKSCSSSCN 217
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL +REV+ +E + YVPEI +VMETSAKD+TNVE+ F +A ELK +
Sbjct: 132 GNKCDLTEQREVEPDEPKSFCRYVPEIMFVMETSAKDNTNVEDTFRNIATELKRQH 187
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD ES REV EA+ + E PE V+ETSAK++TN+E AF LA ELKN
Sbjct: 122 GNKCDSESLREVTPEEAQGLAEQYPEFMAVLETSAKENTNIEAAFVALATELKN------ 175
Query: 78 CNEPIN--TDNTNSPITLSNDTKSIRNKC 104
++P+ TD I+LS+ + C
Sbjct: 176 THDPVGHLTDEDLRRISLSSTKVGHKAAC 204
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 341 NKSDLSDLREVQLEEAQSLAEHYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMF 400
Query: 79 NEPINTDN 86
+E NTD+
Sbjct: 401 SEK-NTDS 407
>gi|156366235|ref|XP_001627045.1| predicted protein [Nematostella vectensis]
gi|156213942|gb|EDO34945.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE EREV +A + + V+ETSAKD+TN+E AFY LA ELKNR
Sbjct: 125 GNKKDLEREREVSLEDAVNCASHYGMLD-VLETSAKDATNIEAAFYRLARELKNR----- 178
Query: 78 CNEPINTDNT-NSPITLSNDTKSIRNKCNC 106
C E +N + ITL D++ + K +C
Sbjct: 179 CEEGSGLENIDDGGITL--DSRQVHRKWSC 206
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLES+REV F E +E+ + + I ++ ETSAK+S+NVE+AF LANE+K + +
Sbjct: 122 GNKVDLESKREVTFEEGKELADSL-NIRFI-ETSAKNSSNVEKAFITLANEIKAKVAKGS 179
Query: 78 CNEPINTDNTNSPITLSNDTK 98
PI T +P N K
Sbjct: 180 EAVPIKTGPRITPDQQQNTVK 200
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 10/74 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL S+++VD + AEE + +P +ETSAK STNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTSKKQVDRSTAEEFAKSLNIP----FLETSAKISTNVEQAFMTMAAEIKNR--- 172
Query: 76 TLCNEPINTDNTNS 89
L ++PI T S
Sbjct: 173 -LASQPITTQQQPS 185
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD ES REV EA+ + + PE +ETSAK++TN+E F LA ELKN
Sbjct: 122 GNKCDCESLREVTQEEAQALADQYPEFMATIETSAKENTNIESVFVMLATELKN------ 175
Query: 78 CNEPIN--TDNTNSPITLSNDTKSIRNKC 104
++P+ TD I+L+ +N C
Sbjct: 176 THDPVGHLTDEDLRRISLNTSKVGPKNAC 204
>gi|334342428|ref|XP_001378446.2| PREDICTED: ras-related protein Rab-43-like [Monodelphis domestica]
Length = 210
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV +EA+ + E+ EI +ETSAKDS+NVEEAF +A EL R +
Sbjct: 128 GNKSDLSDLREVQLSEAQSLAEHY-EILCAIETSAKDSSNVEEAFVKVATELMMRHGGPV 186
Query: 78 CNEPINTDN 86
+E NTDN
Sbjct: 187 FSEK-NTDN 194
>gi|449266320|gb|EMC77384.1| Ras-related protein Rab-43, partial [Columba livia]
Length = 145
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 62 GNKSDLSDLREVQLEEAQSLAEHYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPM 121
Query: 78 CNEPINTDN 86
+E NTD+
Sbjct: 122 FSEK-NTDS 129
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ VDFN A+ + + +I + +ETSAK STNVE+AF +A E+KNR +A+
Sbjct: 120 GNKSDLVAKKVVDFNTAKAFADSL-QIPF-LETSAKQSTNVEQAFMTMATEIKNRLTAS- 176
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
+P T + N + S+ S ++ C
Sbjct: 177 --QPTQTVDKNKVVPGSSAPISPKSGC 201
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL SER V ++ A+ + + I + METSAKDSTNVE+AF +A+ +K+R +
Sbjct: 120 GNKCDLTSERAVSYDTAKAFADEIG-IPF-METSAKDSTNVEQAFMAMASSIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P T+N P T+ + + K C
Sbjct: 174 ASQP--TNNARPP-TVQIRGQPVGQKSGC 199
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL SER V ++ A+ + + I + METSAKDSTNVE+AF +A+ +K+R +
Sbjct: 120 GNKCDLTSERAVSYDTAKAFADEIG-IPF-METSAKDSTNVEQAFMAMASSIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P T+N P T+ + + K C
Sbjct: 174 ASQP--TNNARPP-TVQIRGQPVGQKSGC 199
>gi|348526560|ref|XP_003450787.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 224
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE EREV F EA + + I +ETSAKDS NV+EAF +A EL +R +
Sbjct: 127 GNKCDLEQEREVPFQEACNLAKQ-KGILAALETSAKDSQNVDEAFMLMARELLSRNGLDM 185
Query: 78 CNEPINTDNTNSPITL 93
+P + ++ ++P L
Sbjct: 186 --QPNDFESKDTPRVL 199
>gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella vectensis]
gi|156221287|gb|EDO42144.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL R+V +N A+E E + +I ++ ETSAKDSTNVE F +A ELK + + L
Sbjct: 120 GNKCDLIDCRQVGYNTAKEFAEKL-DISFI-ETSAKDSTNVESVFRTMAAELKAKLGSPL 177
Query: 78 CNEPINTDNTNS-PITLSNDTKSIRNKCNC 106
P D+T++ P+ LS D S+ C
Sbjct: 178 -TSPTAGDSTDACPLKLS-DGVSVEQSHKC 205
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSP 90
++P+N +NSP
Sbjct: 174 ASQPVNNKASNSP 186
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL S+R V++N A+E Y ++ +ETSAK STNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTSKRAVEYNSAKE---YADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRMG-- 174
Query: 77 LCNEPINTDNTNSPITLSN 95
P+ T + +
Sbjct: 175 ----PVQQAGTGPSVRIGG 189
>gi|291220854|ref|XP_002730440.1| PREDICTED: RAB family member (rab-19)-like [Saccoglossus
kowalevskii]
Length = 212
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLES REV ++A+ + + + +ETSAKDSTNVEEAF LA ELK R ++
Sbjct: 128 GNKRDLESLREVTVSDAKALAHHHGMLES-LETSAKDSTNVEEAFGKLAKELKKRHGGSM 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
E SP +S D++ + C
Sbjct: 187 SLEA----GDESP-NISLDSRRVDGSWGC 210
>gi|432942757|ref|XP_004083059.1| PREDICTED: ras-related protein Rab-19-like isoform 1 [Oryzias
latipes]
Length = 222
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 18 SNKCDLESEREVDF----NEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDLE ER+V F N A+E+G I +ETSAK S NVEEAF +A EL +R
Sbjct: 127 GNKCDLEEERQVRFQDACNLAKEIG-----ILAALETSAKASQNVEEAFVMMARELMSRN 181
Query: 74 SATLCNEPIN 83
+E IN
Sbjct: 182 GLLFQHEDIN 191
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DLES++ V+FN A+E E +P +ETSAKDSTNVE+AF +A +K+R
Sbjct: 120 GNKNDLESKKSVEFNVAKEFAEQLNIP----FLETSAKDSTNVEQAFLTMAKHIKDRMGT 175
Query: 76 TLCNEPINTDNTNSPITLSN 95
N + T S + LS+
Sbjct: 176 ---NSVGSGAGTKSGVKLSS 192
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + R VD++ A+ + + I + +ETSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKCDLTANRAVDYDTAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N++ P T+ + + K C
Sbjct: 174 ASQP--AMNSSRPATVQMKGQPVVQKSGC 200
>gi|50754287|ref|XP_414313.1| PREDICTED: ras-related protein Rab-43 [Gallus gallus]
Length = 215
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 132 GNKSDLSDLREVQLEEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPM 191
Query: 78 CNEPINTDN 86
+E NTD+
Sbjct: 192 FSEK-NTDS 199
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ VD+N A+ + + +I + +ETSAK STNVE+AF +A E+KNR +A+
Sbjct: 120 GNKSDLVAKKVVDYNTAKAFADLL-QIPF-LETSAKQSTNVEQAFMTMATEIKNRLTAS- 176
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P T + N + ++ I+ K C
Sbjct: 177 --QPTQTVDRNKVV--PGTSQPIQAKSGC 201
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + R V ++ A+E + + I + METSAKD+TNVE+AF ++ +KNR +
Sbjct: 120 GNKCDLTANRAVSYDTAKEFADQIG-IPF-METSAKDATNVEQAFMAMSASIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P + N P T+ + + K C
Sbjct: 174 ASQP--SANNGRPPTVQIRGQPVGQKSGC 200
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 18 SNKCDLESEREVDFNEAEEM--GEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCD+ ++ V++ A+E G +P +ETSAKDSTNVE+AF +A ++K R S
Sbjct: 121 GNKCDITDKKVVEYTVAKEFADGLGIP----FLETSAKDSTNVEQAFLTMARQIKERMS- 175
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
N +NT ++ + + + T ++ C
Sbjct: 176 ---NSTLNTASSKTTVKVGQGTNVSQSSSGC 203
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL SER ++ A+ + + I + METSAKDSTNVE+AF +A+ +K+R +
Sbjct: 120 GNKCDLTSERAASYDTAKAFADEIG-IPF-METSAKDSTNVEQAFMAMASSIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIR 101
++P T+N P D++ R
Sbjct: 174 ASQP--TNNAKPPTVQIRDSQLAR 195
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+N A+E + +P +ETSAKDSTNVE+AF +A E+K R +
Sbjct: 120 GNKCDLTAKKVVDYNTAKEFADQLGIP----FLETSAKDSTNVEQAFITMAAEIKARMA 174
>gi|432942759|ref|XP_004083060.1| PREDICTED: ras-related protein Rab-19-like isoform 2 [Oryzias
latipes]
Length = 166
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 18 SNKCDLESEREVDF----NEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDLE ER+V F N A+E+G I +ETSAK S NVEEAF +A EL +R
Sbjct: 71 GNKCDLEEERQVRFQDACNLAKEIG-----ILAALETSAKASQNVEEAFVMMARELMSRN 125
Query: 74 SATLCNEPIN 83
+E IN
Sbjct: 126 GLLFQHEDIN 135
>gi|431911652|gb|ELK13800.1| Ras-related protein Rab-19 [Pteropus alecto]
Length = 217
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFVLMARELIARNSLHL 187
Query: 78 CNE--PINTDNTNSPITLSNDTKSIRNKCNC 106
C E P + +SP+ L+ S +++C C
Sbjct: 188 CGESTPNSLPLDSSPVLLAQ-APSEKSQCTC 217
>gi|326927841|ref|XP_003210097.1| PREDICTED: ras and EF-hand domain-containing protein-like, partial
[Meleagris gallopavo]
Length = 420
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 338 NKSDLSDLREVQLEEAQSLAEHYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMF 397
Query: 79 NEPINTDN 86
+E NTD+
Sbjct: 398 SEK-NTDS 404
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ VDF A+E + + I + +ETSAK++TNVE+AF +A E+K Q
Sbjct: 122 GNKCDLTNKKVVDFTTAKEFADQL-SIPF-LETSAKNATNVEQAFMTMAAEIKKVQG--- 176
Query: 78 CNEPI--NTDNTNSPITLSNDTKSIRN---KCNC 106
NEP TN IT S K N C C
Sbjct: 177 -NEPAPGGGGGTNVKITQSQPIKDKPNSGGGCGC 209
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL +++ VDF A+E E VP +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKCDLTTKKVVDFTTAKEYAESLGVP----FLETSAKNATNVEQAFMTMAAEIKNRMGP 178
Query: 76 TLCNEPINTD---NTNSPI 91
+ + ++ N+++P+
Sbjct: 179 SPAPQGAGSNVKINSSTPV 197
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ VD+N A+ + + +I + +ETSAK STNVE+AF +A E+KNR +A+
Sbjct: 120 GNKSDLVAKKVVDYNTAKAFADSL-QIPF-LETSAKQSTNVEQAFMTMATEIKNRLTAS- 176
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
+P T + N + + S ++ C
Sbjct: 177 --QPTQTPDKNKVVPGQSAPISTKSGC 201
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD+ A+E Y ++ +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKCDLTTKKVVDYTTAKE---YADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPV 179
Query: 77 LC---NEPINTDNTNSPI 91
N+P N+++P+
Sbjct: 180 TAASENKPSVKINSSTPV 197
>gi|440792164|gb|ELR13392.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 264
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 6 GWPDSAHDSR-----VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEE 60
G P +A + + KCDLES+R VD +++ + + + +V ETS+K+STNVE+
Sbjct: 165 GPPPAASTQKKVRKLLVGTKCDLESKRVVDKARGQQLADEL-NVPFV-ETSSKNSTNVEQ 222
Query: 61 AFYCLANELKNRQSATLCNEPINTDNTNSPITLSNDTKSI 100
AF +A E+KN+Q P +T + LS T +
Sbjct: 223 AFLLMAKEIKNKQG------PPPAASTQKKVDLSGPTTPV 256
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ KCDLES+R VD +++ + + + +V ETS+K+STNVE+AF +A E+KN+Q
Sbjct: 109 LVGTKCDLESKRVVDKARGQQLADEL-NVPFV-ETSSKNSTNVEQAFLLMAKEIKNKQG 165
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
D+A + NKCDL+S REV +E + + E E + METSA DSTNVE AF + E
Sbjct: 118 DTAIARMLVGNKCDLDSIREVSRDEGKSLAE--EESLFFMETSALDSTNVEAAFEVVIRE 175
Query: 69 LKNRQSATLCN-EPINTDNTNSPITLSN-DTKSIRNKCNC 106
+ N S + N + + T + ++L N DT S + +C
Sbjct: 176 IYNNMSRKILNSDSYKAELTANRVSLVNGDTSSKKYGFSC 215
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + R V ++ A+E + + I + METSAKD+TNVE+AF ++ +KNR +
Sbjct: 120 GNKCDLTANRAVSYDTAKEFADQI-GIPF-METSAKDATNVEQAFMGMSASIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P + N P T+ + + K C
Sbjct: 174 ASQP--SANNGRPPTVQIRGQPVGPKSGC 200
>gi|417408694|gb|JAA50887.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLGALREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFMRVATELVMRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E +TD+ + D+K I C
Sbjct: 189 LSEK-STDH------IQLDSKDIGESWGC 210
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + EI + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 129 GNKCDLTTKKVVDYTTAKEYADQL-EIPF-LETSAKNATNVEQAFMTMAAEIKNRMG 183
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + EI + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKCDLTTKKVVDYTTAKEYADQL-EIPF-LETSAKNATNVEQAFMTMAAEIKNRMG 177
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
+KCDL + R V ++ A+E + + I + METSAKD+TNVE+AF ++ +KNR +
Sbjct: 120 GSKCDLTANRAVSYDTAKEFADQIG-IPF-METSAKDATNVEQAFMAMSASIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P + N P T+ + + K C
Sbjct: 174 ASQP--SANNGRPPTVQIRGQPVGQKSGC 200
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLES+REV E +E+ + + I ++ ETSAK+S+NVE+AF LANE+K + + +
Sbjct: 122 GNKVDLESKREVTSEEGKELADSL-NIRFI-ETSAKNSSNVEKAFITLANEIKAKVAKSS 179
Query: 78 CNEPINTDNTNSPITLSNDTK 98
P+ T +P N K
Sbjct: 180 EAIPVKTGPRITPDQQQNTVK 200
>gi|355714857|gb|AES05140.1| RAB19, member RAS oncoprotein family [Mustela putorius furo]
Length = 126
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 39 GNKCDLWEKRHVLFEDACTLAEKYGLL-AVLETSAKESKNIDEVFMLMARELIARNSLHL 97
Query: 78 CNE-PINTDNTNS-PITLSNDTKSIRNKCNC 106
E P+N+ +S PI ++ D R K +C
Sbjct: 98 FGESPVNSLALDSRPILVAQDP---REKTHC 125
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD+ A+ + EI +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTAKKVVDYQTAKAFAD---EIGIPFLETSAKNATNVEQAFMTMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P + ++ P T+ + +++K NC
Sbjct: 173 MASQP--SMSSAKPTTIPLRGQVLQHKPNC 200
>gi|346987769|gb|AEO51738.1| Rab8 [Helicoverpa armigera]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDLE++R+V E++ EY +I ++ ETSAKDS NVE AFY LA ++K +
Sbjct: 118 ILGNKCDLEAKRQVSKERGEQLAVEY--QIKFI-ETSAKDSLNVESAFYTLARDIKAK 172
>gi|112982896|ref|NP_001037576.1| small GTP binding protein RAB8 [Bombyx mori]
gi|95102574|gb|ABF51225.1| small GTP binding protein RAB8 [Bombyx mori]
gi|102993217|gb|ABF71468.1| ras-related GTP-binding protein Rab8 [Bombyx mori]
Length = 210
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL+S+R+V E++ EY +I +V ETSAKDS NVE AFY LA ++K +
Sbjct: 118 ILGNKCDLDSQRQVSKERGEQLAIEY--QIKFV-ETSAKDSLNVEYAFYTLARDIKAK 172
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++++VD+ A+E + + I + +ETSAK++TNVE+AF +A E+KNR T+
Sbjct: 120 GNKSDLAAKKQVDYTTAKEFADSIG-IPF-LETSAKNATNVEQAFMTMAAEIKNRMGPTM 177
Query: 78 CNEPINTDNT 87
+ +T
Sbjct: 178 ASGGAKKKDT 187
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD+ A+ + EI +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTAKKVVDYQTAKAFAD---EIGIPFLETSAKNATNVEQAFMTMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P + + P T+ + +++K NC
Sbjct: 173 MASQP--SMSAAKPTTIPLRGQVLQHKPNC 200
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + EI + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKCDLTTKKVVDYTTAKEYADQL-EIPF-LETSAKNATNVEQAFMTMAAEIKNRMG 177
>gi|149392705|gb|ABR26155.1| ras-related protein ric1 [Oryza sativa Indica Group]
Length = 104
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR---QS 74
NKCDL R V + + + + + I + +ETSAKD+TNVE+AF +A E+KNR Q
Sbjct: 22 GNKCDLAENRVVSYEAGKALADEIG-IPF-LETSAKDATNVEKAFMTMAGEIKNRMASQP 79
Query: 75 ATLCNEPINTDNTNSPIT 92
AT ++P P+
Sbjct: 80 ATNASKPATVQMRGQPVA 97
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR- 72
NKCDL R V + A+E+G +P +ETSAKD+TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIG--IP----FLETSAKDATNVEKAFMTMAGEIKNRM 173
Query: 73 --QSATLCNEPINTDNTNSPI 91
Q AT ++P P+
Sbjct: 174 ASQPATNASKPATVQMRGQPV 194
>gi|297263149|ref|XP_001094209.2| PREDICTED: ras-related protein Rab-43-like [Macaca mulatta]
Length = 270
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 188
Query: 78 CNE 80
+E
Sbjct: 189 FSE 191
>gi|410951836|ref|XP_003982599.1| PREDICTED: ras-related protein Rab-43 [Felis catus]
Length = 173
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 91 GNKSDLGELREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFVRVATELVMRHGGPL 149
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E TD+ + D+K + C
Sbjct: 150 LSEK-GTDH------IQLDSKDVGESWGC 171
>gi|327265909|ref|XP_003217750.1| PREDICTED: ras-related protein Rab-43-like [Anolis carolinensis]
Length = 221
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E +I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 139 GNKSDLSDLREVQLEEAQSLAERY-DITCAIETSAKDSSNVEEAFVKMATELMMRHGGPM 197
Query: 78 CNEPINTDN 86
+E NTD+
Sbjct: 198 FSES-NTDS 205
>gi|344297148|ref|XP_003420261.1| PREDICTED: ras-related protein Rab-19-like [Loxodonta africana]
Length = 217
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V F +A + E + V+ETSAK+S N+EE F +A EL R S L
Sbjct: 129 GNKADLWDQRHVLFEDACTLAEKYGLLA-VLETSAKESRNIEEVFVLMAKELIARNSPHL 187
Query: 78 CNEP-INTDNTNSPITLSNDTKSIRNKCNC 106
C EP +++ +S L S C C
Sbjct: 188 CGEPTLSSLPLDSSPVLVAQGPSRETHCTC 217
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD+ A+E Y ++ +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKCDLTTKKVVDYTTAKE---YTDQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMG-- 177
Query: 77 LCNEPINTDNTNSP 90
P+ + N P
Sbjct: 178 ----PVTAASENKP 187
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + R V + A+E+G +P +ETSAKD+TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLAANRVVSYETGKAFADEIG--IP----FLETSAKDATNVEKAFMTMAAEIKNR- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N + P T+ + + K +C
Sbjct: 173 ---MASQP--AMNASRPATVQMRGQPVTQKSSC 200
>gi|66730539|ref|NP_001019502.1| ras-related protein Rab-43 [Rattus norvegicus]
gi|81887426|sp|Q53B90.1|RAB43_RAT RecName: Full=Ras-related protein Rab-43
gi|50898338|gb|AAT86135.1| Ras-related protein RAB43 [Rattus norvegicus]
Length = 210
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 128 GNKSDLADLREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPM 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E NTD+ + D+K I C
Sbjct: 187 FSEK-NTDH------IQLDSKDIAESWGC 208
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R V + A+ + + I + METSAKD+TNVE+AF +A +K+R +
Sbjct: 120 GNKCDLEANRAVSYETAKAFADEIG-IPF-METSAKDATNVEQAFMAMAASIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQPANNAR---PPTVQIRGQPVAQKGGC 199
>gi|148225612|ref|NP_001089457.1| uncharacterized protein LOC734507 [Xenopus laevis]
gi|67678420|gb|AAH97569.1| MGC114765 protein [Xenopus laevis]
Length = 209
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EAE + + +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 127 GNKSDLHESREVQLREAETLARHF-DIPCAIETSAKDSSNVEEAFEKMATELMMRHGG-- 183
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ ++ ++ I L + C C
Sbjct: 184 ---PVFSEKSSDSIKLDSTDVGEAWGCGC 209
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R V + A+ + + I + METSAKD+TNVE+AF +A +K+R +
Sbjct: 120 GNKCDLEANRAVSYETAKAFADEIG-IPF-METSAKDATNVEQAFMAMAASIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQPANNAR---PPTVQIRGQPVAQKGGC 199
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A+E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTQTGKALADELG--IP----FLETSAKDSINVEQAFLTMAGEIKKK- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N+P T S + + + I K NC
Sbjct: 173 ---MGNQPAGAKKTGSTVQIKG--QPIEQKSNC 200
>gi|395516732|ref|XP_003762541.1| PREDICTED: ras-related protein Rab-43-like [Sarcophilus harrisii]
Length = 212
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV +EA+ + + EI +ETSAKDS+NVEEAF +A EL R +
Sbjct: 130 GNKSDLSDLREVQLSEAQLLADRY-EILCAIETSAKDSSNVEEAFVKVATELMMRHGGPV 188
Query: 78 CNEPINTDN 86
NE NT N
Sbjct: 189 FNEK-NTGN 196
>gi|149036668|gb|EDL91286.1| Ras-related protein RAB43, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 74 GNKSDLADLREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPM 132
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E NTD+ + D+K I C
Sbjct: 133 FSEK-NTDH------IQLDSKDIAESWGC 154
>gi|86476069|ref|NP_001034483.1| ras-related protein Rab-43 isoform a [Mus musculus]
gi|81914382|sp|Q8CG50.1|RAB43_MOUSE RecName: Full=Ras-related protein Rab-43
gi|26986192|emb|CAD58914.1| Ras-related protein Rab [Mus musculus]
gi|112293049|dbj|BAF02902.1| Rab41 [Mus musculus]
gi|148666805|gb|EDK99221.1| RIKEN cDNA 1810048P08, isoform CRA_c [Mus musculus]
Length = 210
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 128 GNKSDLADFREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPM 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E NTD+ + D+K I C
Sbjct: 187 FSEK-NTDH------IQLDSKDIAESWGC 208
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+E+++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKSDMETKKVVDYTTAKEYADQLGIP----FLETSAKNATNVEQAFMTMAAEIKNRMGP 178
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ P N P N + ++ C
Sbjct: 179 VISASP-----DNKPSVKINASNPVKQSGGC 204
>gi|149728237|ref|XP_001488993.1| PREDICTED: ras-related protein Rab-43-like [Equus caballus]
Length = 212
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLSELREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFVRVATELVVRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E +TD+ + D+K I C
Sbjct: 189 LSEK-STDH------IQLDSKDIGESWGC 210
>gi|50234889|ref|NP_940892.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910891|ref|NP_001191812.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910893|ref|NP_001191813.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910895|ref|NP_001191814.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910897|ref|NP_001191815.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|332261797|ref|XP_003279953.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Nomascus
leucogenys]
gi|332261799|ref|XP_003279954.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Nomascus
leucogenys]
gi|332261801|ref|XP_003279955.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Nomascus
leucogenys]
gi|332817855|ref|XP_003339099.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|332817859|ref|XP_003310046.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Pan troglodytes]
gi|410037466|ref|XP_003950231.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|426342028|ref|XP_004036318.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Gorilla gorilla
gorilla]
gi|426342030|ref|XP_004036319.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Gorilla gorilla
gorilla]
gi|74727944|sp|Q86YS6.1|RAB43_HUMAN RecName: Full=Ras-related protein Rab-43; AltName: Full=Ras-related
protein Rab-41
gi|27549389|gb|AAO17291.1| RAB43 [Homo sapiens]
gi|38382891|gb|AAH62319.1| RAB43, member RAS oncogene family [Homo sapiens]
gi|119599689|gb|EAW79283.1| hCG2022580, isoform CRA_f [Homo sapiens]
gi|158255464|dbj|BAF83703.1| unnamed protein product [Homo sapiens]
gi|383413231|gb|AFH29829.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|384941264|gb|AFI34237.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|410219510|gb|JAA06974.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410251892|gb|JAA13913.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410301460|gb|JAA29330.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410331215|gb|JAA34554.1| RAB43, member RAS oncogene family [Pan troglodytes]
Length = 212
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E SP + ++K I C
Sbjct: 189 FSE-------KSPDHIQLNSKDIGEGWGC 210
>gi|345317701|ref|XP_001505416.2| PREDICTED: ras-related protein Rab-43-like [Ornithorhynchus
anatinus]
Length = 184
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV +A+ + E+ EI +ETSAKDS+NVEEAF +A EL R +
Sbjct: 102 GNKSDLSELREVQLEDAQNLAEHY-EIICAIETSAKDSSNVEEAFVKVATELMMRHGGPV 160
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
E +P+ + D+K + C
Sbjct: 161 FIE-------KNPVGIKLDSKDVVESWGC 182
>gi|402887099|ref|XP_003906942.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Papio anubis]
gi|402887101|ref|XP_003906943.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Papio anubis]
Length = 212
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E SP + ++K I C
Sbjct: 189 FSE-------KSPDHIQLNSKDIGEGWGC 210
>gi|193806508|sp|A6NDJ8.3|RB43L_HUMAN RecName: Full=Putative Rab-43-like protein ENSP00000330714
gi|119603088|gb|EAW82682.1| hCG1815489 [Homo sapiens]
Length = 181
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 99 GNKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 157
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E SP + ++K I C
Sbjct: 158 FSE-------KSPDHIQLNSKDIGEGWGC 179
>gi|395847163|ref|XP_003796253.1| PREDICTED: ras-related protein Rab-43 [Otolemur garnettii]
Length = 212
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 130 GNKSDLRELREVTLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGG-- 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ ++ + I L D+K I C
Sbjct: 187 ---PMFSEKSTDHIQL--DSKDIGESWGC 210
>gi|21746181|ref|NP_598478.1| ras-related protein Rab-43 isoform b [Mus musculus]
gi|16307406|gb|AAH10248.1| Rab43 protein [Mus musculus]
gi|148666806|gb|EDK99222.1| RIKEN cDNA 1810048P08, isoform CRA_d [Mus musculus]
Length = 156
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 74 GNKSDLADFREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPM 132
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E NTD+ + D+K I C
Sbjct: 133 FSEK-NTDH------IQLDSKDIAESWGC 154
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL +++ VDF A+E Y ++ +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDFTTAKE---YADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMG-- 177
Query: 77 LCNEPINTDNTNSP-ITLSNDTKSIRNKCNC 106
PI + + P + +++ T NK C
Sbjct: 178 ----PITAASDSKPSVKINSSTPVSANKGGC 204
>gi|359322066|ref|XP_003639768.1| PREDICTED: ras-related protein Rab-43-like [Canis lupus familiaris]
Length = 212
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLGQLREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFVRVATELVVRHGGPL 188
Query: 78 CNEPINTDNTN 88
+E TD+
Sbjct: 189 LSEK-GTDHIQ 198
>gi|380806733|gb|AFE75242.1| ras-related protein Rab-43 isoform a, partial [Macaca mulatta]
Length = 138
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 70 GNKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 128
Query: 78 CNE 80
+E
Sbjct: 129 FSE 131
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-- 73
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQAFMTMAAEIKKRMGP 178
Query: 74 SATLCNEPINTDNTNSPITLSN 95
AT + N ++P+ S+
Sbjct: 179 GATAGGQEKNVKIQSTPVKQSS 200
>gi|148666803|gb|EDK99219.1| RIKEN cDNA 1810048P08, isoform CRA_a [Mus musculus]
Length = 146
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R +
Sbjct: 64 GNKSDLADFREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPM 122
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E NTD+ + D+K I C
Sbjct: 123 FSEK-NTDH------IQLDSKDIAESWGC 144
>gi|301764549|ref|XP_002917698.1| PREDICTED: ras-related protein Rab-43-like [Ailuropoda melanoleuca]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 136 GNKSDLSELREVPLAEAQSLVEHY-DILCAIETSAKDSSNVEEAFVRVATELVVRHGGPL 194
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E TD+ + D+K + + C
Sbjct: 195 LSEK-GTDH------IQLDSKDVGDGWGC 216
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + VP +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGVP----FLETSAKNATNVEQAFMTMAAEIKNRMG 174
>gi|357630896|gb|EHJ78715.1| small GTP binding protein RAB8 [Danaus plexippus]
Length = 209
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL+++R+V E++ EY +I +V ETSAKDS NVE AFY LA ++K +
Sbjct: 118 ILGNKCDLDAKRQVSKERGEQLAVEY--QIKFV-ETSAKDSLNVEYAFYTLARDIKAK 172
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E E + I + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLSTKKVVDYAAAKEYAEQLG-IPF-LETSAKNATNVEQAFMTMAAEIKNRMG 174
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + VP +ETSAK++TNVE+AF +A E+KNR
Sbjct: 124 GNKCDLTTKKVVDYTTAKEYADQLGVP----FLETSAKNATNVEQAFMTMAAEIKNRMG 178
>gi|355714954|gb|AES05174.1| ras-related protein Rab-43-like protein [Mustela putorius furo]
Length = 211
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLGELREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFVRVATELVVRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E TD+ + D+K + C
Sbjct: 189 LSEK-GTDH------IQLDSKDVGESWGC 210
>gi|444512842|gb|ELV10184.1| Ras-related protein Rab-43 [Tupaia chinensis]
Length = 212
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 130 GNKSDLGELREVTLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELVVRHGG-- 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ + + L + S C C
Sbjct: 187 ---PVFRGKSAGHLQLDSKDVSAGWGCGC 212
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ---S 74
NKCDL +++ VD+ A+E + + I + +ETSAK +TNVE+AF +A E+K R +
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKSATNVEQAFMTMAAEIKKRMGPGA 177
Query: 75 ATLCNEPINTDNTNSPI 91
T NE N ++P+
Sbjct: 178 TTGGNEKSNVKIQSTPV 194
>gi|440902734|gb|ELR53487.1| Ras-related protein Rab-19 [Bos grunniens mutus]
Length = 217
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACILAEKYGLLA-VLETSAKESKNIDEVFVLMARELMARHSLPL 187
Query: 78 CNE--PINTDNTNSPITLSNDTKSIRNKCNC 106
E P + ++P+ ++ + +N+C C
Sbjct: 188 YGEGAPGSLPLESTPVLMAPAPRE-KNQCTC 217
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR---QS 74
NKCDL R V + + + + + I + +ETSAKD+TNVE+AF +A E+KNR Q
Sbjct: 120 GNKCDLAESRVVSYEAGKALADEIG-IPF-LETSAKDATNVEKAFMTMAAEIKNRMASQP 177
Query: 75 ATLCNEPINTDNTNSPITLSN 95
A ++P P+ N
Sbjct: 178 AANASKPATVQMRGQPVAQQN 198
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A+E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTQMGKALADELG--IP----FLETSAKDSINVEQAFLTMAGEIKKK- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N+P T S + + + I K NC
Sbjct: 173 ---MGNQPAGAKRTGSTVQIKG--QPIEQKGNC 200
>gi|78042536|ref|NP_001030212.1| ras-related protein Rab-19 [Bos taurus]
gi|109892951|sp|Q3ZC27.1|RAB19_BOVIN RecName: Full=Ras-related protein Rab-19
gi|73587379|gb|AAI02962.1| RAB19, member RAS oncogene family [Bos taurus]
gi|296488160|tpg|DAA30273.1| TPA: RAB19, member RAS oncogene family [Bos taurus]
Length = 217
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACILAEKYGLLA-VLETSAKESKNIDEVFVLMARELMARHSLPL 187
Query: 78 CNE--PINTDNTNSPITLSNDTKSIRNKCNC 106
E P + ++P+ ++ + +N+C C
Sbjct: 188 YGEGAPGSLPLESTPVLMAPAPRE-KNQCTC 217
>gi|281205492|gb|EFA79682.1| Ras GTPase [Polysphondylium pallidum PN500]
Length = 190
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLESER+V E +++ + + +ETSAK NVEEAFY L E++
Sbjct: 113 VVGNKCDLESERQVTTGEGQDLAKSF--VSPFLETSAKIRVNVEEAFYTLVREIRK 166
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VDF A+E + + +I + +ETSAK++TNVE+AF +A E+K Q
Sbjct: 120 GNKCDLTNKKVVDFTTAKEFADQL-QIPF-LETSAKNATNVEQAFMTMAAEIKRAQG 174
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VDF+ A++ E +P +ETSAK+STNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDFSTAKQYAEQLGIP----FLETSAKNSTNVEQAFMTMAAEIKAR 172
>gi|281347015|gb|EFB22599.1| hypothetical protein PANDA_006037 [Ailuropoda melanoleuca]
Length = 196
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 114 GNKSDLSELREVPLAEAQSLVEHY-DILCAIETSAKDSSNVEEAFVRVATELVVRHGGPL 172
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E TD+ + D+K + + C
Sbjct: 173 LSEK-GTDH------IQLDSKDVGDGWGC 194
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S+R VDFN A+ + + I ++ ETSAK+++NVE+AF +A E+KNR +
Sbjct: 122 GNKTDLTSKRVVDFNTAKAFADEIG-IPFI-ETSAKNASNVEQAFMTMAAEIKNR----M 175
Query: 78 CNEP 81
EP
Sbjct: 176 AREP 179
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLES+R+V F E +E+ + + I ++ ETSA +S NVE AF LA E+K+R
Sbjct: 122 GNKADLESKRQVTFEEGKELADSLG-IKFI-ETSALNSNNVETAFITLATEIKSRVQKNT 179
Query: 78 CNEP--INTDNTNSPITLSNDTKSIRNKCNC 106
P N + I +D + + K C
Sbjct: 180 ETAPRGANAQTGKTKIKAGDDLSNKKKKDGC 210
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 115 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 168
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P NT P T+ + + K C
Sbjct: 169 ASQP--AMNTARPPTVQIRGQPVNQKSGC 195
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR---QS 74
NKCDL R V + + + + + I + +ETSAKD+TNVE+AF +A E+KNR Q
Sbjct: 120 GNKCDLAESRVVSYEAGKALADEIG-IPF-LETSAKDATNVEKAFMTMAAEIKNRMASQP 177
Query: 75 ATLCNEPINTDNTNSPITLSN 95
A ++P P+ N
Sbjct: 178 AGNASKPATVQMRGQPVAQQN 198
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P+N P T+ + + K C
Sbjct: 174 ASQPVNNAR---PPTVQIRGQPVNQKAGC 199
>gi|395733146|ref|XP_003776183.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 2 [Pongo
abelii]
Length = 394
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 313 NKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLF 371
Query: 79 NE 80
+E
Sbjct: 372 SE 373
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQ-SA 75
NK DL S+R VD+ A+ + EI +ETSAK STNVE+AF +A E+KNR S
Sbjct: 120 GNKNDLTSKRAVDYQTAKA---FADEIGIPFLETSAKSSTNVEQAFMTMAAEIKNRMASQ 176
Query: 76 TLCNEP 81
T+ +P
Sbjct: 177 TMAAKP 182
>gi|113679535|ref|NP_001038812.1| ras-related protein Rab-43 [Danio rerio]
gi|112419206|gb|AAI22422.1| Zgc:153788 [Danio rerio]
gi|182890198|gb|AAI65016.1| Zgc:153788 protein [Danio rerio]
Length = 208
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL REV +A+ M + + + ETSAKDS+NV+EAF +A+EL R
Sbjct: 125 GNKCDLSESREVPLEDAQTMAHQLDFVSAI-ETSAKDSSNVDEAFNKMASELILRHGG-- 181
Query: 78 CNEPINTDNTNSPITLSN-DTKSIRNKCNC 106
P+ T+N L+ D C C
Sbjct: 182 ---PMFTENVTDSFKLTGKDVAGEGWGCGC 208
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 124 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 177
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P NT P T+ + + K C
Sbjct: 178 ASQP--AMNTARPPTVQIRGQPVNQKSGC 204
>gi|297717321|ref|XP_002834898.1| PREDICTED: ras-related protein Rab-43-like [Pongo abelii]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ EI +ETSAKDS+ VEEAF +A EL R + L
Sbjct: 131 NKSDLSELREVSLAEAQSLAEHY-EILCAIETSAKDSSKVEEAFLRVATELIMRHGSPLF 189
Query: 79 NEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E SP + ++K I C
Sbjct: 190 SE-------KSPDHIQLNSKDIGEGWGC 210
>gi|397518578|ref|XP_003829461.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Pan paniscus]
Length = 394
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 313 NKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLF 371
Query: 79 NE 80
+E
Sbjct: 372 SE 373
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
DS + NKCDLE+ REV E + + E E + METSA DSTNV+ AF + E
Sbjct: 116 DSTVARMLVGNKCDLENIREVSIEEGKALAE--EEGLFFMETSALDSTNVQTAFEIVIRE 173
Query: 69 LKNRQSATLCN-EPINTDNTNSPITLSNDTKSIRN 102
+ N S + N + + + + +TL N + S +N
Sbjct: 174 IYNNISRKVLNSDSYKAELSVNRVTLVNGSGSKKN 208
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 18 SNKCDLESEREVDFNEAEEM--GEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDLE+ R V + A+ G +P METSAKD+TNVE+AF + +K+R
Sbjct: 120 GNKCDLEANRAVSYETAKAFADGIGIP----FMETSAKDATNVEQAFMAMTASIKDR--- 172
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N P T+ + + K C
Sbjct: 173 -MASQPANNAR---PPTVQIRGQPVAQKGGC 199
>gi|431913720|gb|ELK15210.1| Ras-related protein Rab-43 [Pteropus alecto]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS NVEEAF +A EL R L
Sbjct: 130 GNKSDLGELREVPLAEAQSLAEHY-DILCAIETSAKDSNNVEEAFIRVATELVMRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E +TD+ + D+K I C
Sbjct: 189 LSEK-STDH------IQLDSKDIGESWGC 210
>gi|344275963|ref|XP_003409780.1| PREDICTED: ras-related protein Rab-43-like [Loxodonta africana]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 130 GNKSDLGELREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGG-- 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ ++ + I L D+K I C
Sbjct: 187 ---PMFSEKSTDHIQL--DSKDISESWGC 210
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S++ VD+ A+ + + I ++ ETSAK++TNVE+AF +ANE+KNR ++
Sbjct: 120 GNKSDLTSQKVVDYATAKAFADEIG-IPFI-ETSAKNATNVEQAFMTMANEIKNRMASQP 177
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
NT P + +S+ K +C
Sbjct: 178 QMNAGPRGNTVRP----GEGRSVNAKSSC 202
>gi|432090072|gb|ELK23668.1| Ras-related protein Rab-43 [Myotis davidii]
Length = 156
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEM-GEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL REV EA+ + G Y +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 74 GNKSDLGELREVPLAEAQSLVGHY--DILCAIETSAKDSSNVEEAFVRVATELVMRHGGP 131
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
L +E +TD+ + D+K I C
Sbjct: 132 LLSEK-STDH------IQLDSKDIGESWGC 154
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NKCDL++ REV E + + E E + METSA DSTNV AF + E+ + S +
Sbjct: 126 NKCDLDNIREVPVEEGKALAE--AEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKI- 182
Query: 79 NEPINTDNTNSPITLSNDTKSIRNKC 104
+N+D+ + ++L+ D KC
Sbjct: 183 ---LNSDSYKAELSLNRDWSKWAEKC 205
>gi|354482851|ref|XP_003503609.1| PREDICTED: ras-related protein Rab-43-like [Cricetulus griseus]
Length = 203
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 121 GNKSDLADFREVPLTEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPL 179
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E +TD+ + D+K + C
Sbjct: 180 FSEK-STDH------IQLDSKDVTESWGC 201
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NKCDL++ REV E + + E E + METSA DSTNV AF + E+ + S +
Sbjct: 126 NKCDLDNIREVPVEEGKALAE--AEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKI- 182
Query: 79 NEPINTDNTNSPITLSNDTKSIRNKC 104
+N+D+ + ++L+ D KC
Sbjct: 183 ---LNSDSYKAELSLNRDWSKWAEKC 205
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-- 73
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLAIP----FLETSAKNATNVEQAFMTMAAEIKKRMGP 175
Query: 74 SATLCNEPINTDNTNSPITLSN 95
AT + N ++P+ S
Sbjct: 176 GATAGGDKPNLKIDSTPVRQSG 197
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
V NKCD+E R+V E++ EY + METSAK S NVEEAF+ LA ++K +
Sbjct: 118 VLGNKCDMEDRRQVSKERGEQLAVEYGIKF---METSAKASINVEEAFFTLARDIKLKMD 174
Query: 75 ATLCNE-PINTDNTNSPITLSNDTKSIRNKCN 105
L N P +T IT +TK +C+
Sbjct: 175 KKLENSNPASTGAV--KITHEKETKRSIFRCS 204
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK DL S++ VD+ A+E + VP +ETSAK++TNVE+AF +A E+KNR
Sbjct: 121 IVGNKSDLTSKKAVDYTTAKEYADSLGVP----FLETSAKNATNVEQAFLTMAAEIKNRV 176
Query: 74 SA 75
S+
Sbjct: 177 SS 178
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R A
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 177
Query: 76 TLCNEPINTDNT 87
T+ E N T
Sbjct: 178 TVGGEKPNVKLT 189
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
DS + NKCDLES REV E + E E + METSA DSTNV++AF + E
Sbjct: 115 DSTVARMLVGNKCDLESLREVSTEEGKAFAE--EEGLFFMETSALDSTNVQKAFEIVIRE 172
Query: 69 LKNRQSATLCN-EPINTDNTNSPITLSNDTKSIRNKCN 105
+ N S + N + + + + ++L N S +N N
Sbjct: 173 IYNNISRKVLNSDSYKAELSVNRVSLVNGAGSKKNLLN 210
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P+N P T+ + + K C
Sbjct: 174 ASQPVNNAR---PPTVQIRGQPVNQKSGC 199
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR---QS 74
NKCDL R V + + + + + I + +ETSAKD+TNVE+AF +A E+KNR Q
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIG-IPF-LETSAKDATNVEKAFMTMAGEIKNRMASQG 177
Query: 75 ATLCNEPINTDNTNSPI 91
T ++P P+
Sbjct: 178 RTNASKPATVQMPRQPV 194
>gi|432901786|ref|XP_004076946.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Oryzias
latipes]
Length = 170
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R A
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 145
Query: 76 TLCNEPINTDNT 87
T+ E N T
Sbjct: 146 TVGGEKPNVKLT 157
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDLE R V + E G+ + E H V METSAK NVE AF LA ++KN+
Sbjct: 118 ILGNKCDLEESRVV----SRERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAKDIKNKM 173
Query: 74 SATLCNEPINTDNTNSPIT 92
+ + T +N +T
Sbjct: 174 DRRNPGDDMGTSQSNVHVT 192
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+E R+V + E++ EY + METSAK S NVEEAF+ L ++K +
Sbjct: 118 ILGNKCDMEDRRQVSRDRGEKLAIEYGVKF---METSAKSSINVEEAFFTLGRDIKAKMD 174
Query: 75 ATL-CNEPINTDNTN 88
L N P N
Sbjct: 175 KKLDLNSPQKGGNVQ 189
>gi|432901788|ref|XP_004076947.1| PREDICTED: ras-related protein Rab-1A-like isoform 3 [Oryzias
latipes]
Length = 170
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R A
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 145
Query: 76 TLCNEPINTDNT 87
T+ E N T
Sbjct: 146 TVGGEKPNVKLT 157
>gi|62858653|ref|NP_001016330.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266921|emb|CAJ82248.1| RAB43, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 209
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EAE + + +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 127 GNKSDLREFREVALQEAETLARHC-DITCAIETSAKDSSNVEEAFVQMATELMMRHGG-- 183
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ ++ I L + + C C
Sbjct: 184 ---PVFSEKAPDGIKLHSKDVAEAWGCGC 209
>gi|403268268|ref|XP_003926200.1| PREDICTED: ras-related protein Rab-43 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 130 GNKSDLSELREVSQAEAQRLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 188
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E SP + ++K I C
Sbjct: 189 FSE-------KSPDHIQLNSKDIGEGWGC 210
>gi|344253374|gb|EGW09478.1| Ras-related protein Rab-43 [Cricetulus griseus]
Length = 201
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 119 GNKSDLADFREVPLTEAQSLAEHY-DILCAIETSAKDSSNVEEAFTRVATELIMRHGGPL 177
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E +TD+ + D+K + C
Sbjct: 178 FSEK-STDH------IQLDSKDVTESWGC 199
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-- 73
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLAIP----FLETSAKNATNVEQAFMTMAAEIKKRMGP 175
Query: 74 SATLCNEPINTDNTNSPITLSN 95
AT + N ++P+ S
Sbjct: 176 GATTGGDKPNLKIESTPVRQSG 197
>gi|223648634|gb|ACN11075.1| Ras-related protein Rab-1A [Salmo salar]
Length = 170
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ---S 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R +
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 145
Query: 75 ATLCNEPINTDNTNSPI 91
T NE N ++P+
Sbjct: 146 TTGGNERSNVKIDSTPV 162
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ VD N A+ + + I + +ETSAK STNVE+AF +A E+KNR +A
Sbjct: 120 GNKSDLVAKKVVDTNTAKSFADTL-GIPF-LETSAKQSTNVEQAFMTMATEIKNRLTA-- 175
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P T T + + I+ K C
Sbjct: 176 -SQPAPT--TGGAKVVPGSSAPIQTKSGC 201
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ---- 73
NKCDL R V + + + + + I + +ETSAKD+TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIG-IPF-LETSAKDATNVEKAFMTMAGEIKNRMASQP 177
Query: 74 SATLCNEPINTDNTNSPIT 92
+A+ + P P++
Sbjct: 178 AASGASRPATVQMRGQPVS 196
>gi|109149711|ref|XP_001115890.1| PREDICTED: putative Rab-43-like protein ENSP00000330714-like,
partial [Macaca mulatta]
Length = 82
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 1 NKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLF 59
Query: 79 NEPINTDNTNSPITLSNDTKSIRNKCNC 106
+E SP + ++K I C
Sbjct: 60 SE-------KSPDHIQLNSKDIGEGWGC 80
>gi|114794557|pdb|2HUP|A Chain A, Crystal Structure Of Human Rab43 In Complex With Gdp
gi|114794558|pdb|2HUP|B Chain B, Crystal Structure Of Human Rab43 In Complex With Gdp
Length = 201
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 141 GNKSDLSELREVSLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPL 199
>gi|348544655|ref|XP_003459796.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Oreochromis
niloticus]
Length = 169
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R A
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADSLA-IPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 145
Query: 76 TLCNEPINTDNTNSPITLSN 95
T + N ++P+ S
Sbjct: 146 TAGGDKPNLKIDSTPVRQSG 165
>gi|291393364|ref|XP_002713135.1| PREDICTED: Ras-related protein RAB43-like [Oryctolagus cuniculus]
Length = 106
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 14 SRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
S NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 20 SLTGGNKSDLGELREVPLAEAQSLAEHY-DILCAIETSAKDSSNVEEAFMRVATELIMRH 78
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ ++ + I L D+K I C
Sbjct: 79 GG-----PMFSEKSTDHIQL--DSKDIGESWGC 104
>gi|51094782|gb|EAL24028.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 264
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N+EE F +A EL R S L
Sbjct: 176 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIEEVFVLMAKELIARNSLHL 234
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S L S + C C
Sbjct: 235 YGESALNGLPLDSSPVLMAQGPSEKTHCTC 264
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL S++ V+++ A+ + EI +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKSDLTSKKVVEYSVAKAFAD---EIGIPFLETSAKNATNVEQAFMTMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNK 103
+ ++PI T P+ + K I +K
Sbjct: 173 MASQPIPT-KAGGPVVRPQEGKPINSK 198
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR-QSAT 76
NK DLE++R+V F+E +E+ + + I ++ ETSA ++NVE AF LA E+ +R Q ++
Sbjct: 122 GNKIDLENKRQVSFDEGKELADSLG-IKFI-ETSALTASNVENAFVTLATEIISRVQKSS 179
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
N+ N + + I D +I+ + C
Sbjct: 180 DNNKGGNQASGKTRIRAGEDINNIKKQGGC 209
>gi|57097619|ref|XP_539883.1| PREDICTED: ras-related protein Rab-19 [Canis lupus familiaris]
Length = 217
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S NV+E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNVDEVFTLMARELIARNSLHL 187
Query: 78 CNE-PINTDNTNS-PITLSNDTKSIRNKCNC 106
E +++ +S P+ L+ D K + C C
Sbjct: 188 LGERTLDSPAPDSRPVVLAQDPKE-KTHCMC 217
>gi|432901790|ref|XP_004076948.1| PREDICTED: ras-related protein Rab-1A-like isoform 4 [Oryzias
latipes]
Length = 165
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R A
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 140
Query: 76 TLCNEPINTDNT 87
T+ E N T
Sbjct: 141 TVGGEKPNVKLT 152
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ---- 73
NKCDL R V + + + + + I + +ETSAKD+TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLAENRVVSYEAGKALADDIG-IPF-LETSAKDATNVEKAFMTMAGEIKNRMASQP 177
Query: 74 SATLCNEPINTDNTNSPIT 92
+A+ + P P++
Sbjct: 178 AASGASRPATVQMRGQPVS 196
>gi|51094783|gb|EAL24029.1| similar to dGTPase (EC 3.1.5.1) - mouse (fragment) [Homo sapiens]
Length = 150
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N+EE F +A EL R S L
Sbjct: 62 GNKCDLWEKRHVLFEDACTLAEKYGLL-AVLETSAKESKNIEEVFVLMAKELIARNSLHL 120
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S L S + C C
Sbjct: 121 YGESALNGLPLDSSPVLMAQGPSEKTHCTC 150
>gi|15277822|gb|AAK94004.1| GTP binding protein Rab1a [Scyliorhinus canicula]
Length = 94
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 10 LVGNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMG 66
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VDF A+E + + I + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKSDLTTKKVVDFTTAKEFADQL-SIPF-LETSAKNATNVEQAFMTMAAEIKNRMG 174
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK +TNVEEAF +A E+KNR +
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKSATNVEEAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P+N P T++ + + K C
Sbjct: 174 ATQPMNNAR---PPTVNIRGQPVNQKSGC 199
>gi|389749801|gb|EIM90972.1| ras protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFNCRFIETSAKQRINVDEAFSNLVREIRRY 173
Query: 73 QSATLCNEPINTDNTNSP 90
P+ + +P
Sbjct: 174 NKEQQTGRPVQPNGPGAP 191
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK STNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLETSAKSSTNVEQAFMTMAAEIKKRMG 174
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL S+R V F E +E + + ++ ETSAK++ NVE+AF+ +A+E+K R
Sbjct: 120 GNKCDLTSKRVVSFEEGKEFADSC-NMRFI-ETSAKNAHNVEQAFHIMASEIKARVQV-- 175
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
N+ + N N I S +++ + C
Sbjct: 176 -NQQQSRPNANVRIGPSQPVRNVSSGC 201
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + R V ++ A+E + + I + METSAKD+TNVE+AF ++ +KNR +
Sbjct: 120 GNKSDLTANRVVSYDTAKEFADQIG-IPF-METSAKDATNVEDAFMAMSAAIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P + N P T+ + + K C
Sbjct: 174 ASQP--SANNAKPPTVQIRGQPVGQKSGC 200
>gi|13195562|gb|AAK15758.1|AF329890_1 ras-like protein [Pisolithus sp. 441]
Length = 213
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFTNLVREIRKY 173
Query: 73 QSATLCNEPINTDNTNSPITLSN 95
P+ + N P S
Sbjct: 174 NKEQQTGRPVMANPGNVPGVYSG 196
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A++ E +P +ETSAK+STNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKAVDYTTAKQYAEQLGIP----FLETSAKNSTNVEQAFMTMAAEIKAR 172
>gi|312073182|ref|XP_003139405.1| hypothetical protein LOAG_03820 [Loa loa]
gi|307765435|gb|EFO24669.1| hypothetical protein LOAG_03820, partial [Loa loa]
Length = 141
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL + R V+ + A+E Y ++ +ETSAK STNVE+AF +A+E+KNR
Sbjct: 59 GNKCDLTTRRAVEQSAAKE---YADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMG-- 113
Query: 77 LCNEPINTDNTNSPITLSN 95
P+ T + +
Sbjct: 114 ----PVQQVGTGPSVRIGG 128
>gi|349804207|gb|AEQ17576.1| putative member ras oncogene family [Hymenochirus curtipes]
Length = 143
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 63 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 117
>gi|5094|emb|CAA26191.1| SPRAS-protein [Schizosaccharomyces pombe]
Length = 219
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK----- 70
+ +NKCDLE+ER V E E++ + + ++ +ETSAK NVEEAFY L ++
Sbjct: 118 LVANKCDLEAERVVSRREREQLAKSMHCLY--VETSAKLRLNVEEAFYSLVRTIRRYNKS 175
Query: 71 ------NRQSATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
N+Q+ + P +T S + S + KC
Sbjct: 176 EEKGFHNKQAVQIAQVPASTAKRASAVNNSKTEDEVSTKC 215
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL S+R VDF A++ + +P +METSAK+ST ++EAF LA+++K
Sbjct: 143 IVGNKCDLNSKRAVDFKIAKKFADELNIP----IMETSAKESTAIDEAFIKLASDIKK 196
>gi|239915976|ref|NP_001008749.2| ras-related protein Rab-19 [Homo sapiens]
gi|114616316|ref|XP_001153248.1| PREDICTED: ras-related protein Rab-19 isoform 1 [Pan troglodytes]
gi|397484561|ref|XP_003813442.1| PREDICTED: ras-related protein Rab-19 [Pan paniscus]
gi|426358117|ref|XP_004046368.1| PREDICTED: ras-related protein Rab-19 [Gorilla gorilla gorilla]
gi|158513667|sp|A4D1S5.2|RAB19_HUMAN RecName: Full=Ras-related protein Rab-19
gi|187954847|gb|AAI40797.1| RAB19 protein [Homo sapiens]
Length = 217
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N+EE F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIEEVFVLMAKELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S L S + C C
Sbjct: 188 YGESALNGLPLDSSPVLMAQGPSEKTHCTC 217
>gi|410917516|ref|XP_003972232.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Takifugu
rubripes]
Length = 170
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK STNVE+AF +A E+K R
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLETSAKSSTNVEQAFMTMAAEIKKRMG 142
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGILF--LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD+ A+E + ++H +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDYTTAKE---FADQLHIPFLETSAKNATNVEQAFMTMAAEIKNRMG 177
>gi|442755975|gb|JAA70147.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 207
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NK DL +++ VD+ A+E +++ I + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 LVGNKSDLTTKKVVDYTTAKEFADHL-NIPF-LETSAKNATNVEQAFMTMAAEIKNRMG 179
>gi|389612086|dbj|BAM19568.1| ras-related protein Rab-8, partial [Papilio xuthus]
Length = 211
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL+ +R+V E++ +Y +I +V ETSAKDS NVE AFY LA ++K +
Sbjct: 118 ILGNKCDLDDKRQVSKERGEQLAIDY--QIKFV-ETSAKDSLNVEYAFYTLARDIKAK 172
>gi|262401001|gb|ACY66403.1| Ras-related protein Rab-1A [Scylla paramamosain]
Length = 132
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL ++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+KNR
Sbjct: 49 GNKCDLTHKKVVDYQTAKEYADSLGIP----FLETSAKNATNVEQAFMTMAAEIKNRMG 103
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKCDLTENKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P+N P T+ + + K C
Sbjct: 174 ASQPVNNAR---PPTVQIRGQPVNQKSGC 199
>gi|348538475|ref|XP_003456716.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Oreochromis
niloticus]
Length = 171
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 142
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ VD+ A+E + + +I + +ETSAK + NVE+AF +A E+KNR
Sbjct: 122 GNKCDLTTKKVVDYTTAKEYADTL-KIPF-LETSAKTANNVEQAFMTMAAEIKNRMGPGT 179
Query: 78 CNEP 81
P
Sbjct: 180 AASP 183
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V + E G+ + H V METSAK S NVEEAF LA ++K +
Sbjct: 118 ILGNKCDMNDKRQV----SAERGQALAMDHNVKFMETSAKTSANVEEAFISLARDIKKKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L + N+++ +T N K KC
Sbjct: 174 DRKLESPNSNSNDGKIKVTTENQPKKGSWKC 204
>gi|426228109|ref|XP_004008157.1| PREDICTED: ras-related protein Rab-19 [Ovis aries]
Length = 217
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACILAEKYGLLA-VLETSAKESKNIDEVFVLMARELMARHSLPL 187
Query: 78 --CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P + ++P+ ++ + +N+C C
Sbjct: 188 HGGGAPGSLPLESTPVLMAPAPRE-KNQCTC 217
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTSKKVVEYSVAKEFADQLGIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
T +T +P
Sbjct: 177 TTTAAGTGKSSTITP 191
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL++++ VD A E+ + I + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLQTKKRVDTTTAMELANQLG-IPF-LETSAKNATNVEQAFMTMAAEIKNR 172
>gi|410900348|ref|XP_003963658.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Takifugu
rubripes]
Length = 171
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMG 142
>gi|390475391|ref|XP_002758719.2| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Callithrix
jacchus]
Length = 394
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R L
Sbjct: 313 NKSDLSELREVTQAEAQRLAEHY-DILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLF 371
Query: 79 NE 80
+E
Sbjct: 372 SE 373
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + R V ++ A+E + + I + METSAKD+TNVE AF +A +K+R +
Sbjct: 120 GNKSDLTANRAVSYDTAKEFADQI-GIPF-METSAKDATNVEGAFMAMAAAIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P + N P T+ + + K C
Sbjct: 174 ASQP--SANNARPPTVQIRGQPVGQKSGC 200
>gi|403344602|gb|EJY71649.1| Rab GTPase 2b [Oxytricha trifallax]
Length = 240
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 10 SAHDSRVW--SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN 67
++ D RV+ NK +LE +REV F A E +IH ETSAK NVEE F C+A
Sbjct: 130 ASEDVRVYLIGNKSELEDQREVTFERAMEFARE-QKIHKTFETSAKTGFNVEEVFSCVAK 188
Query: 68 EL 69
EL
Sbjct: 189 EL 190
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLIENKVVDTQTAKAFADELG--IP----FLETSAKDSINVEQAFLTMAGEIKRK- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N+P T N ++ T+ + I+ K NC
Sbjct: 173 ---MGNQP--TANKSTGGTVQMKGQPIQQKNNC 200
>gi|302307241|ref|NP_983834.2| ADL262Wp [Ashbya gossypii ATCC 10895]
gi|299788905|gb|AAS51658.2| ADL262Wp [Ashbya gossypii ATCC 10895]
gi|374107047|gb|AEY95955.1| FADL262Wp [Ashbya gossypii FDAG1]
Length = 270
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V NK DLE ER+V F E E+ H+ +ETSAK + NVEE+FY LA +++
Sbjct: 120 VVGNKSDLEGERQVSFEEGAELAR-----HFNASFLETSAKQAINVEESFYGLARLVRD 173
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL S+R V + E +E + + ++ ETSAK++ NVE+AF+ +A+E+K R
Sbjct: 148 GNKCDLTSKRTVTYEEGKEFADSC-NMRFI-ETSAKNAHNVEQAFHIMASEIKARVQV-- 203
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
N+ + N N + S +S+ + C
Sbjct: 204 -NQQQSRPNANVRLGPSQPVRSVSSGC 229
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL R V + A+ + + I + METSAKDSTNVE+AF +A+ +K R +
Sbjct: 120 GNKCDLTENRAVPYETAKAFADEIG-IPF-METSAKDSTNVEQAFMAMASSIKER----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P T+N P T+ + + K C
Sbjct: 174 ASQP--TNNARPP-TVQIRGQPVGQKSGC 199
>gi|410917518|ref|XP_003972233.1| PREDICTED: ras-related protein Rab-1A-like isoform 3 [Takifugu
rubripes]
Length = 165
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK STNVE+AF +A E+K R
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLETSAKSSTNVEQAFMTMAAEIKKRMG 137
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DL+ EREV+ ++ E + + +ETSA D TNVE+AF L ++ +++A
Sbjct: 118 IVGNKADLKQEREVNTSDGTEFAQ--KHSAFFIETSALDGTNVEKAFSDLLIQIYKKKNA 175
Query: 76 TLCNEPINTDNT 87
TL N+ + +DN+
Sbjct: 176 TLKNDSVPSDNS 187
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD+ A+E ++ +P +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDYTTAKEFADHLNIP----FLETSAKNATNVEQAFMTMAAEIKNRMG 177
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL R V+ + A+E Y ++ +ETSAK STNVE+AF +A+E+KNR
Sbjct: 123 GNKCDLIIRRAVEHSAAKE---YADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMG-- 177
Query: 77 LCNEPINTDNTNSPITLSN 95
PI T + +
Sbjct: 178 ----PIQQVGTGPSVRIGG 192
>gi|389611059|dbj|BAM19140.1| ras-related protein Rab-8 [Papilio polytes]
Length = 130
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL+++R+V E++ +Y +I +V ETSAKDS NVE AFY LA ++K +
Sbjct: 37 ILGNKCDLDAKRQVSKERGEQLAIDY--QIKFV-ETSAKDSLNVEYAFYTLARDIKAK 91
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|328872885|gb|EGG21252.1| hypothetical protein DFA_01130 [Dictyostelium fasciculatum]
Length = 207
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDLE+ER++ +E EE+G+ VP +ETSAK NVEE+FY L E+
Sbjct: 133 LVGNKCDLEAERKISKSEGEELGKNLGVP----FLETSAKTRHNVEESFYQLVREI 184
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 177
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL R V+ + A+E Y ++ +ETSAK STNVE+AF +A+E+KNR
Sbjct: 123 GNKCDLIIRRAVEHSAAKE---YADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMG-- 177
Query: 77 LCNEPINTDNTNSPITLSN 95
PI T + +
Sbjct: 178 ----PIQQVGTGPSVRIGG 192
>gi|348519351|ref|XP_003447194.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 220
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R+V F +A + E + +ETSAK++ N+E AF +A EL R T+
Sbjct: 127 GNKSDLHAKRQVLFEDACNLAEN-SGVLAALETSAKEAQNIEAAFILMARELMARNGMTI 185
Query: 78 CNEPINTDNTNSP-ITLSNDTKSIRN------KCNC 106
NE + NSP LSN++ + + KC C
Sbjct: 186 INE----SSENSPQFMLSNNSHPVPSAVATDKKCGC 217
>gi|119604354|gb|EAW83948.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 217
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N+EE F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEK-HGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S L S + C C
Sbjct: 188 YGESALNGLPLDSSPVLMAQGPSEKTHCTC 217
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE++R+V F+E +E+ + + I ++ ETSA + NVE AF LA E+K+R T
Sbjct: 122 GNKIDLENKRQVSFDEGKELADSLG-IKFI-ETSALTANNVENAFVTLATEIKSRVQKT- 178
Query: 78 CNEPINTDNTNSPITLSNDTK 98
TDN N+ TK
Sbjct: 179 ------TDNKNNNAAGQGKTK 193
>gi|355561049|gb|EHH17735.1| hypothetical protein EGK_14197 [Macaca mulatta]
Length = 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 176 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDELFVLMAKELIARNSLHL 234
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L S + C C
Sbjct: 235 YGESALNSLPLDSSPVLMAQGPSEKTHCTC 264
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
DS + NKCDLE+ REV E + + E E + METSA DSTNV+ AF + E
Sbjct: 116 DSTVARMLVGNKCDLENIREVSIEEGKALAE--EEGLFFMETSALDSTNVQTAFEIVIRE 173
Query: 69 LKNRQSATLCN-EPINTDNTNSPITLSNDTKSIRN 102
+ N S + N + + + +TL N S +N
Sbjct: 174 IYNNISRKVLNFDSYKAELFVNRVTLVNGFGSKKN 208
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL + + V +E + EI METSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTANKVV---SSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P+N P T+ + + K C
Sbjct: 173 MASQPVNNAR---PPTVQIRGQPVNQKAGC 199
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL S++ +D+ A+E + + +I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTSKKVIDYVTAKEYADAL-DIPF-LETSAKNATNVEQAFLTMAAEIKKRMG 174
>gi|355748056|gb|EHH52553.1| hypothetical protein EGM_13010 [Macaca fascicularis]
Length = 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 176 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDELFVLMAKELIARNSLHL 234
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L S + C C
Sbjct: 235 YGESALNSLPLDSSPVLMAQGPSEKTHCTC 264
>gi|281204171|gb|EFA78367.1| Ras GTPase [Polysphondylium pallidum PN500]
Length = 523
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDLE REV E +++ + + +H ME SA+ NVEE+FY L E++ R+
Sbjct: 135 GNKCDLEHLREVTLEEGKDLAKCLGMLH--MEASARTRHNVEESFYELVREMRRRERG 190
>gi|156344743|ref|XP_001621296.1| hypothetical protein NEMVEDRAFT_v1g5879 [Nematostella vectensis]
gi|156207079|gb|EDO29196.1| predicted protein [Nematostella vectensis]
Length = 106
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL R+V +N A+E E + +I ++ ETSAKDSTNVE F +A ELK + + L
Sbjct: 47 GNKCDLIDCRQVGYNTAKEFAEKL-DISFI-ETSAKDSTNVESVFRTMAAELKAKLGSPL 104
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DL+ EREV+ ++ E + + +ETSA D TNVE+AF L ++ +++A
Sbjct: 118 IVGNKADLKQEREVNTSDGTEFAQ--KHSAFFIETSALDGTNVEKAFSDLLIQIYKKKNA 175
Query: 76 TLCNEPINTDNTN 88
TL N+ + +DN+
Sbjct: 176 TLKNDSVPSDNSK 188
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR----- 72
NKCDL +++ VD A+E + + I + +ETSAK+S+NVE AF +A +K R
Sbjct: 120 GNKCDLVTKKAVDTQMAQEFADSLG-IPF-LETSAKESSNVETAFIEMAKNIKKRVAAQG 177
Query: 73 --QSATLCNEPINTDNTNSPITLSNDTKS 99
AT P+ T N N P T S KS
Sbjct: 178 ANSGATAGGRPLLTGN-NRPATNSGGQKS 205
>gi|390343455|ref|XP_794320.3| PREDICTED: ras-related protein Rab-43-like [Strongylocentrotus
purpuratus]
Length = 220
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DLE REVD+ +A+ + + + +E SAKDSTN++E F+ L ELK R
Sbjct: 138 GNKKDLEQIREVDYEDAQALSSHHAMLE-CIEVSAKDSTNIDETFWKLGQELKRRHGG 194
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E Y +++ +E SAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTTKKVVDYTTAKE---YADQLNMPFLEASAKNATNVEQAFMTMAAEIKNR 172
>gi|410900350|ref|XP_003963659.1| PREDICTED: ras-related protein Rab-1A-like isoform 3 [Takifugu
rubripes]
Length = 166
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+K R
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMG 137
>gi|348538477|ref|XP_003456717.1| PREDICTED: ras-related protein Rab-1A-like isoform 3 [Oreochromis
niloticus]
Length = 166
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQAFMTMAAEIKKRMG 137
>gi|330793230|ref|XP_003284688.1| hypothetical protein DICPUDRAFT_91367 [Dictyostelium purpureum]
gi|325085386|gb|EGC38794.1| hypothetical protein DICPUDRAFT_91367 [Dictyostelium purpureum]
Length = 186
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL+ ER+V NE +E+ + P METSAK NVEE+FY L E++
Sbjct: 113 LVGNKCDLDHERQVSVNEGQELAKSFNCP----FMETSAKSRINVEESFYSLVREIRK 166
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E Y +++ +E SAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTTKKVVDYTTAKE---YADQLNMPFLEASAKNATNVEQAFMTMAAEIKNR 172
>gi|390600435|gb|EIN09830.1| ras-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 215
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELK-- 70
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 173
Query: 71 NRQSATLCNEPINTDNT 87
N++ P NT N
Sbjct: 174 NKEMQQTGRPPANTGNA 190
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
D+ + NKCDLE+ REV E + + E E + METSA DSTNVE AF + E
Sbjct: 117 DTTAARMLVGNKCDLENIREVSREEGKTLAE--EESLFFMETSALDSTNVEAAFEVVIRE 174
Query: 69 LKNRQSATLCNEPINTDNTNSPITLSNDTKSIRNKCN 105
+ + S + +N+D+ + +T+ N ++N N
Sbjct: 175 IYHNMS----RKTLNSDSYKAELTV-NRVSLVKNNAN 206
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 7 WPDSAHDSRVWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYC 64
+ SA + NKCDL+ +R V+++ A+E E +P +ETSA DSTNVEEAF
Sbjct: 109 YATSAVLKLLVGNKCDLDGKRMVEYDVAKEFAESNNMP----FLETSALDSTNVEEAFLT 164
Query: 65 LANELK 70
+A ++K
Sbjct: 165 MARQIK 170
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V+ A+ V I + +ETSAKD+TNVE+AF +A E+K R
Sbjct: 121 GNKCDLAEKRAVEQQMAKAFANDVG-IPF-LETSAKDATNVEQAFLTMAREIKKRVGG-- 176
Query: 78 CNEPINTDNTNSPI-TLSNDTKSIRNKCNC 106
T + NS I T+ K ++ K NC
Sbjct: 177 -----QTTSNNSQIGTVQMKGKPLQQKNNC 201
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL S+R V + E +E + + ++ ETSAK++ NVE+AF+ +A+E+K R
Sbjct: 120 GNKCDLTSKRTVTYEEGKEFADSC-NMRFI-ETSAKNAHNVEQAFHIMASEIKARVQV-- 175
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
N+ + N N + S +S+ + C
Sbjct: 176 -NQQQSRPNANVRLGPSQPVRSVSSGC 201
>gi|328872053|gb|EGG20423.1| Ras GTPase [Dictyostelium fasciculatum]
Length = 190
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLESER+V E +++ + P +ETSAK NVEEAFY L E++
Sbjct: 113 VVGNKCDLESERQVTTGEGQDLAKSFGCP----FLETSAKIRVNVEEAFYSLVREIRK 166
>gi|117939065|dbj|BAF36686.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 191
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL S++ VD+N A ++ + + I + +ETSAK++TNVE+AF +A E+ + +A +
Sbjct: 110 GNKCDLTSKKVVDYNTANQLADSLA-ISF-LETSAKNATNVEQAFQTMATEIM-KHTAPV 166
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P + + + ++ KS +KC C
Sbjct: 167 HETP---QSGKTDVVALHEVKS-NDKCGC 191
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL ++R V+ A++ Y ++ +ETSAK STNVE+AF +A+E+K+R
Sbjct: 119 GNKCDLTAKRAVETQAAQD---YAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 173
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE +R V + +E + + I + +ETSAK STNVE+AF +A+++K R +
Sbjct: 120 GNKCDLEGKRVVSTEQGKEFADGLG-IEF-LETSAKTSTNVEQAFLTMASQIKAR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
N+P T ++L ++ ++ +C
Sbjct: 174 KNQPSAAPATKPGVSLR--SQQVKKDSSC 200
>gi|297488828|ref|XP_002697210.1| PREDICTED: ras-related protein Rab-43 [Bos taurus]
gi|296474651|tpg|DAA16766.1| TPA: RAB11B, member RAS oncogene family-like [Bos taurus]
Length = 121
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL REV EA+ + E+ +I +ETSAKDS+NVEEAF +A EL R
Sbjct: 40 NKSDLGQLREVPLAEAQGLAEHY-DILCAIETSAKDSSNVEEAFVRVATELVVRHGGPRL 98
Query: 79 NE 80
+E
Sbjct: 99 SE 100
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK +TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLETSAKSATNVEQAFMTMAAEIKKRMG 174
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQAFMTMAEEIKKR 172
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 13 DSRVWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
D + NKCD+E R+V E++ EY + METSAK + NVEEAF+ LA ++K
Sbjct: 115 DRMIIGNKCDIEERRQVSRERGEQLAIEYGTKF---METSAKANINVEEAFFTLARDIK 170
>gi|348553989|ref|XP_003462808.1| PREDICTED: ras-related protein Rab-43-like [Cavia porcellus]
Length = 210
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL REV EA+ + ++ +I +ETSAKD++NVEEAF +A EL R
Sbjct: 128 GNKSDLAELREVQLAEAQSLAKHY-DILCAIETSAKDASNVEEAFVQVATELIMRHGG-- 184
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P+ + + I L D+K I C
Sbjct: 185 ---PMFREKSTDLIQL--DSKDIGESWGC 208
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + R V + A+ + + I + METSAKD+TNVE+AF +A +K+R +
Sbjct: 120 GNKCDLAANRAVPYETAKAFADEI-GIPF-METSAKDATNVEQAFMAMAASIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--AANNARPPTVQIRGQPVPQKNGC 200
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL S+R VD + A+E + +P +ETSAKDSTNVE+AF +A E+K R +
Sbjct: 120 GNKSDLASKRAVDTSVAKEYADSLGIP----FLETSAKDSTNVEQAFITMAAEIKARMA 174
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ VD A+E + + I + +ETSAK+++NVEEAF +A ++K R +A
Sbjct: 120 GNKCDLVTKKAVDTQMAKEFADSLG-IPF-LETSAKEASNVEEAFVRMATDIKKRVAAQG 177
Query: 78 CNEPINTDNTNSPITLSNDTK---SIRNKCNC 106
N + NS LS K + NK C
Sbjct: 178 ANS--GSGGPNSKPLLSGGNKPAGASGNKGGC 207
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 18 SNKCDLESEREVDFNEAEEM--GEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDLE+ R V + A+ G +P METSAK +TNVE+AF + +K+R
Sbjct: 120 GNKCDLEANRAVSYEAAKAFADGIGIP----FMETSAKGATNVEQAFMAMTASIKDR--- 172
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N P T+ + + K C
Sbjct: 173 -MASQPANNAR---PPTVQIRGQPVAQKGGC 199
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+E R V E++ EY + METSAK S NVEEAF LA ++K +
Sbjct: 118 ILGNKCDMEDRRTVTKERGEQLAIEYGIKF---METSAKASVNVEEAFITLARDIKGKMD 174
Query: 75 ATLCNEPINTDNTNSPI--TLSNDTKSIRNKCNC 106
+ + P N N + T S + KCN
Sbjct: 175 KKMESSP-NPRNQGVKVVDTQSKKSSGFSWKCNI 207
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ VD+ A+ + + I + METSAK++TNVE+AF +ANE+K R ++
Sbjct: 120 GNKSDLTSKKVVDYATAKAFADEIG-IPF-METSAKNATNVEQAFVTMANEIKTRMAS 175
>gi|193690904|ref|XP_001951763.1| PREDICTED: ras-related protein Rab-1A-like [Acyrthosiphon pisum]
Length = 208
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R VD A+E +++ +I + +ETSAK +TNVE AF +A E+KNR
Sbjct: 120 GNKCDLHDKRAVDEATAKEYADHL-KIPF-LETSAKQATNVELAFLTMAAEIKNRIGPLD 177
Query: 78 CNEPINTDNTNSPITL 93
P + +T+
Sbjct: 178 GQGPGGAADGVGKVTI 193
>gi|441640492|ref|XP_003270858.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-19
[Nomascus leucogenys]
Length = 268
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 180 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFVLMAKELIARNSLHL 238
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S L S + C C
Sbjct: 239 YGESALNGLPQDSSPVLMAQGPSEKTHCTC 268
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDL ++R VDF A++ + +P ++ETSAKDST ++EAF LA ++K
Sbjct: 141 IVGNKCDLNNKRAVDFKIAKKFSDELNIP----ILETSAKDSTGIDEAFTKLAADIKKSG 196
Query: 74 S 74
S
Sbjct: 197 S 197
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E Y ++ +E SAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTTKKVVDYTTAKE---YADQLSMPFLEASAKNATNVEQAFMTMAAEIKNR 172
>gi|929569|emb|CAA61434.1| RAS protein [Dictyostelium minutum]
Length = 191
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
++ NKCDL++ER V E G+ + P +ETSAK NVEEAFY L E++N
Sbjct: 113 LFGNKCDLDTERVVSIAEGGRKGKSIGCP----FLETSAKIRVNVEEAFYSLVREIRN 166
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVEEAF +A ++KNR +
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEEAFMAMAADIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--AANNARPPTVQIRGQPVNQKSGC 200
>gi|348538100|ref|XP_003456530.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Oreochromis
niloticus]
Length = 170
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK +TNVE+AF +A E+K R
Sbjct: 88 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLETSAKSATNVEQAFMTMAAEIKKRMG 142
>gi|328873597|gb|EGG21964.1| hypothetical protein DFA_01850 [Dictyostelium fasciculatum]
Length = 213
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL+ REV ++E EM + + + ETSAK +NV+EAF+ L E+K
Sbjct: 124 LVGNKCDLDRSREVTYSEGREMAKALGCPFF--ETSAKRRSNVDEAFFELVREIK----- 176
Query: 76 TLCNEPINTDNTNSPITLSND-TKSIRNK 103
+N + TNS + N +KSI+ +
Sbjct: 177 ---KGLLNLNRTNSKLNKKNTVSKSIKKR 202
>gi|281208183|gb|EFA82361.1| hypothetical protein PPL_04786 [Polysphondylium pallidum PN500]
Length = 190
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NKCDLESER+V E +++ + +ETSAK NVEE+FY L E++
Sbjct: 113 VVGNKCDLESERQVTTGEGQDLAKSFGSPF--LETSAKIRVNVEESFYTLVREIRKDLKG 170
Query: 76 T 76
T
Sbjct: 171 T 171
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL ++R V+ A++ Y ++ +ETSAK STNVE+AF +A+E+K+R
Sbjct: 123 GNKCDLTAKRAVETQAAQD---YAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 177
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--AMNNARPPTVQIRGQPVNQKSGC 200
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL ++R V+ A++ Y ++ +ETSAK STNVE+AF +A+E+K+R
Sbjct: 123 GNKCDLTAKRAVETQAAQD---YAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 177
>gi|15281855|gb|AAK94464.1| GTP binding protein Rab1a, partial [Macropus agilis]
Length = 84
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 2 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQSFMTMAAEIKKR 54
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + R V ++ A+E + + I + METSAKD+TNVE AF +A +K+R +
Sbjct: 120 GNKSDLTANRVVSYDTAKEFADQIG-IPF-METSAKDATNVEGAFMAMAAAIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P + N P T+ + + K C
Sbjct: 174 ASQP--SANNARPPTVQIRGQPVGQKGGC 200
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL ++R V+ A++ Y ++ +ETSAK STNVE+AF +A+E+K+R
Sbjct: 122 GNKCDLTAKRAVETQAAQD---YAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG 176
>gi|392594876|gb|EIW84200.1| ras-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 216
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 173
Query: 73 QSATLCNEPINTDNTNSP 90
P+ + +P
Sbjct: 174 NKEQQTGRPMMSSTPGAP 191
>gi|387849222|ref|NP_001248483.1| ras-related protein Rab-19 [Macaca mulatta]
gi|383418347|gb|AFH32387.1| ras-related protein Rab-19 [Macaca mulatta]
Length = 217
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDELFVLMAKELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L S + C C
Sbjct: 188 YGESALNSLPLDSSPVLMAQGPSEKTHCTC 217
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL + + VDF A+++ + + I + ++TSAKD+TNVE+AF +A ++K+R +
Sbjct: 123 GNKADLTNSKAVDFESAKQLADELG-IAF-LDTSAKDATNVEQAFLTMAKQIKDRMGVS 179
>gi|15281857|gb|AAK94465.1| GTP binding protein Rab1a, partial [Taeniopygia guttata]
Length = 94
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 10 LVGNKCDLSTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKR 64
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 19 NKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 248 NKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKR 299
>gi|384483936|gb|EIE76116.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 212
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++ V +A E+ E +P ++ETSAKD+TNVE+AF +A ++K+R +
Sbjct: 129 GNKSDLTDKKVVSTEQANELAESIKIP----LLETSAKDATNVEQAFLTMAKQIKDRMGS 184
Query: 76 TL 77
T+
Sbjct: 185 TM 186
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E KNR
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADQLG-IPF-LETSAKNATNVEQAFMTMAAENKNRMG 177
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL +++ V++ A+E + +P +ETSAK++TNVE+AF +A ++K+R A
Sbjct: 121 GNKSDLTAKKVVEYGAAKEFADQLSIP----FLETSAKNATNVEQAFLTMAKQIKDRMGA 176
Query: 76 T 76
T
Sbjct: 177 T 177
>gi|402865006|ref|XP_003896730.1| PREDICTED: ras-related protein Rab-19 [Papio anubis]
Length = 177
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 89 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFVLMAKELIARNSLHL 147
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L S + C C
Sbjct: 148 YGESALNSLPLDSSPVLMAQGPSEKTHCTC 177
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKN---RQ 73
NKCDL R VD + A+ Y EI +ETSAKDS NVEEAF ++ +KN R
Sbjct: 120 GNKCDLAESRTVDTSVAQA---YAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKARS 176
Query: 74 SATLCNEPIN 83
A L +P N
Sbjct: 177 QAALERKPSN 186
>gi|15281839|gb|AAK94456.1| GTP binding protein Rab1a [Pantherophis guttatus]
gi|15281845|gb|AAK94459.1| GTP binding protein Rab1a, partial [Gallus gallus]
Length = 94
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 10 LVGNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 66
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLVDNKVVDTQTAKAFADELG--IP----FLETSAKDSINVEQAFLTMAGEIKKK- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P + +T + + + + I+ K NC
Sbjct: 173 ---MGSQPAASKSTGTTVQMKG--QPIQQKNNC 200
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + + VD+ A+E + +P +ETSAK +TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTRKVVDYTTAKEFADNLGIP----FLETSAKSATNVEQAFMTMAAEIKKRMG 174
>gi|348538102|ref|XP_003456531.1| PREDICTED: ras-related protein Rab-1A-like isoform 3 [Oreochromis
niloticus]
Length = 165
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK +TNVE+AF +A E+K R
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLETSAKSATNVEQAFMTMAAEIKKRMG 137
>gi|15281847|gb|AAK94460.1| GTP binding protein Rab1a, partial [Elephas maximus]
gi|15281849|gb|AAK94461.1| GTP binding protein Rab1a, partial [Balaenoptera physalus]
gi|15281853|gb|AAK94463.1| GTP binding protein Rab1a, partial [Homo sapiens]
Length = 94
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 10 LVGNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQSFMTMAAEIKKRMG 66
>gi|19114491|ref|NP_593579.1| GTPase Ras1 [Schizosaccharomyces pombe 972h-]
gi|3123259|sp|P08647.2|RAS_SCHPO RecName: Full=Ras-like protein 1; Flags: Precursor
gi|2330716|emb|CAB11218.1| GTPase Ras1 [Schizosaccharomyces pombe]
Length = 219
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK----- 70
+ +NKCDLE+ER V E E++ + + ++ +ETSAK NVEEAFY L ++
Sbjct: 118 LVANKCDLEAERVVSRAEGEQLAKSMHCLY--VETSAKLRLNVEEAFYSLVRTIRRYNKS 175
Query: 71 ------NRQSATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
N+Q+ P +T S + S + KC
Sbjct: 176 EEKGFQNKQAVQTAQVPASTAKRASAVNNSKTEDEVSTKC 215
>gi|407036330|gb|EKE38120.1| Ras family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDLESER+V NEA+ + E + + ETSAK N+ E F L ++K ++AT
Sbjct: 120 GNKCDLESERQVQTNEAKNLAEQWKVLFF--ETSAKAKINITETFQALVKDIKANRAAT 176
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 13 DSRVWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
D + NKCD+E R+V E++ EY + METSAK + NVEEAF+ LA ++K
Sbjct: 115 DRMIIGNKCDIEERRQVSRERGEQLAIEYGTKF---METSAKANINVEEAFFTLARDIK 170
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL++++ VD A E Y ++ +ETSAK++TNVE+AF +A E+KNR
Sbjct: 125 GNKCDLQTKKVVDTTTAME---YANQLGIPFLETSAKNATNVEQAFMTMAAEIKNR---- 177
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
P + S + + + ++S+ +K C
Sbjct: 178 -VGPPSSAAEAPSAVKI-DKSRSVESKSGC 205
>gi|67477041|ref|XP_654039.1| Ras family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|405070|gb|AAA21446.1| ras homologue 1 [Entamoeba histolytica]
gi|56471057|gb|EAL48653.1| Ras family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449704867|gb|EMD45027.1| ras 1 family protein [Entamoeba histolytica KU27]
Length = 205
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDLESER+V NEA+ + E + + ETSAK N+ E F L ++K ++AT
Sbjct: 120 GNKCDLESERQVQTNEAKNLAEQWKVLFF--ETSAKAKINITETFQALVKDIKANRAAT 176
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 18 SNKCDLESEREVDFNEAEEM--GEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++ V+ ++A+E G +P ++ETSAKD+TNVE+AF +A ++K+R +
Sbjct: 120 GNKSDLVDKKAVETDQAKEFADGLSIP----LLETSAKDATNVEQAFLTMAKQIKDRMGS 175
Query: 76 TLCNEPIN 83
++ + N
Sbjct: 176 SMQQQQQN 183
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL+S+++VD+ A+ + +P +ETSAK +TNVE+AF +A+E+K R
Sbjct: 120 GNKSDLQSKKQVDYTTAKAFADERGIP----FLETSAKSATNVEQAFMTMASEIKARMG- 174
Query: 76 TLCNEPINTDNTNSPITLS 94
P N S T+S
Sbjct: 175 -----PAGASNDTSKGTVS 188
>gi|126649339|ref|XP_001388341.1| rab1a protein [Cryptosporidium parvum Iowa II]
gi|126117435|gb|EAZ51535.1| rab1a protein, putative [Cryptosporidium parvum Iowa II]
Length = 208
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL--KNRQSA 75
NKCDL S++ VDF ++ + + ++ + ME+SAK+STNVEE F +A +L K ++
Sbjct: 119 GNKCDLTSQKMVDFATGQKKAQEL-QVDF-MESSAKNSTNVEECFVNIARKLLEKKLKNG 176
Query: 76 TLCNEPINTDN 86
++PIN+ N
Sbjct: 177 ETSSKPINSQN 187
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R A
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSL-SIPF-LETSAKNATNVEQSFMTMAAEIKKRMGPGA 177
Query: 76 TLCNEPINTDNTNSPI 91
T + N ++P+
Sbjct: 178 TAGGDRPNLKIDSTPV 193
>gi|66800415|ref|XP_629133.1| Ras GTPase [Dictyostelium discoideum AX4]
gi|131862|sp|P15064.1|RASG_DICDI RecName: Full=Ras-like protein rasG; Flags: Precursor
gi|7343|emb|CAA77632.1| rasG protein [Dictyostelium discoideum]
gi|167867|gb|AAA33244.1| ras protein (DdrasG) [Dictyostelium discoideum]
gi|60462506|gb|EAL60719.1| Ras GTPase [Dictyostelium discoideum AX4]
Length = 189
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLES+R+V E +++ + +ETSAK NVEEAFY L E++
Sbjct: 113 VVGNKCDLESDRQVTTGEGQDLAKSFGSPF--LETSAKIRVNVEEAFYSLVREIRK 166
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
N+CDL ++ VD+ A+E + + I + +ETSAK++TNVE+AF +A E+KNR
Sbjct: 123 GNQCDLTHKKVVDYQTAKEYADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKNRMG 177
>gi|47939415|gb|AAH71442.1| Zgc:86773 [Danio rerio]
Length = 164
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQAFMTMAEEIKKR 135
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL +R V+++ A+E E +P +ETSA DSTNVEEAF +A ++K +
Sbjct: 120 GNKCDLADKRVVEYDVAKEFAEANKMP----FLETSALDSTNVEEAFLTMARQIKESMTQ 175
Query: 76 TLCNEPINTDNTNSPITLSNDT 97
NE N + L +
Sbjct: 176 QNMNESQQKKNDKGNVNLKGQS 197
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTSKKVVEYSVAKEFADQLTIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
T +T +P
Sbjct: 177 TSTPSGTGKSSTITP 191
>gi|32398960|emb|CAD98425.1| rab1a protein, probable [Cryptosporidium parvum]
Length = 213
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL--KNRQSA 75
NKCDL S++ VDF ++ + + ++ + ME+SAK+STNVEE F +A +L K ++
Sbjct: 124 GNKCDLTSQKMVDFATGQKKAQEL-QVDF-MESSAKNSTNVEECFVNIARKLLEKKLKNG 181
Query: 76 TLCNEPINTDN 86
++PIN+ N
Sbjct: 182 ETSSKPINSQN 192
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE R V ++EA E E + Y+ E SAK + NVE+AF +A LK++ AT
Sbjct: 120 GNKVDLEDSRAVTYDEAREFAEQ-NNMDYI-EASAKTAQNVEKAFESIARALKDK--ATR 175
Query: 78 CNEPI---NTDNTNSPITLSNDTKSIRNKCN 105
C P+ NT N S +S + +++ +KC
Sbjct: 176 CTTPVAAANTFNLGSTTRVSTN-RNMSDKCQ 205
>gi|340502213|gb|EGR28924.1| hypothetical protein IMG5_166730 [Ichthyophthirius multifiliis]
Length = 218
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE++R+V + E +E Y +E SAK + NVEEAF +Q+A +
Sbjct: 118 GNKCDLENQRQVTYEEGQEFAR--QNDLYFLEVSAKTAYNVEEAF---------KQTAKM 166
Query: 78 CNEPINTDNTN 88
E INT N
Sbjct: 167 IYEKINTGQIN 177
>gi|5036|emb|CAA27399.1| put. ras protein [Schizosaccharomyces pombe]
Length = 214
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK----- 70
+ +NKCDLE+ER V E E++ + + ++ +ETSAK NVEEAFY L ++
Sbjct: 113 LVANKCDLEAERVVSRAEGEQLAKSMHCLY--VETSAKLRLNVEEAFYSLVRTIRRYNKS 170
Query: 71 ------NRQSATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
N+Q+ P +T S + S + KC
Sbjct: 171 EEKGFQNKQAVQTAQVPASTAKRASAVNNSKTEDEVSTKC 210
>gi|324512692|gb|ADY45250.1| Ras-related protein Ral-a [Ascaris suum]
Length = 282
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL SER V +A++ E VP I ETSAK TNV++ FY L E+K R+
Sbjct: 201 GNKCDLNSERCVMQIQAQQRAEQWGVPYI----ETSAKHRTNVDKVFYDLMREIKRRKGG 256
Query: 76 TLCNEPINTDNTNSP 90
TL N N+P
Sbjct: 257 TL--------NANAP 263
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDLE+ R V + A+ + EI METSAKD+TNVE+AF +A +K A
Sbjct: 120 GNKCDLEANRAVSYETAKA---FADEIGIPFMETSAKDATNVEQAFMAMAASIKIEWQAN 176
Query: 77 L-CNEPINTDNTNSPI 91
L + N+ + P+
Sbjct: 177 LQTMQASNSADQGQPV 192
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + R V + A+ + + I + METSAKD+TNVE+AF +A +KNR ++
Sbjct: 112 GNKSDLTANRAVSYETAKAFADEIG-IPF-METSAKDATNVEQAFMAMAASIKNRMASQP 169
Query: 78 CN--EPINTDNTNSPITLSN 95
N P + + P+ S+
Sbjct: 170 ANNARPPTVNISGKPVGQSS 189
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|393241397|gb|EJD48919.1| ras-like protein [Auricularia delicata TFB-10046 SS5]
Length = 218
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 122 VVANKCDLEYERQVGMNEGRDLAK-----HFNCKFIETSAKQRINVDEAFSSLVREIRRY 176
Query: 73 QSATLCNEPINTDNTNSP 90
P N P
Sbjct: 177 NKEQQYGRPNAGPNVGGP 194
>gi|443723889|gb|ELU12108.1| hypothetical protein CAPTEDRAFT_157234 [Capitella teleta]
Length = 212
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE++REV F+ A + + I + ETSAKD+ N+E+ F +A ELK
Sbjct: 128 GNKNDLETQREVKFSSARQFANHHNMIDAI-ETSAKDNKNIEDCFVKIATELKRIHGGM- 185
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNK-CNC 106
+ T +S DT+ +R CNC
Sbjct: 186 ----TQLEETTDAQRISLDTRDVRTGFCNC 211
>gi|324521211|gb|ADY47805.1| Ras-related protein Ral-a [Ascaris suum]
gi|324521276|gb|ADY47819.1| Ras-related protein Ral-a [Ascaris suum]
gi|324521632|gb|ADY47893.1| Ras-related protein Ral-a [Ascaris suum]
gi|324522019|gb|ADY47975.1| Ras-related protein Ral-a [Ascaris suum]
Length = 216
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL SER V +A++ E VP I ETSAK TNV++ FY L E+K R+
Sbjct: 135 GNKCDLNSERCVMQIQAQQRAEQWGVPYI----ETSAKHRTNVDKVFYDLMREIKRRKGG 190
Query: 76 TLCNEPINTDNTNSP 90
TL N N+P
Sbjct: 191 TL--------NANAP 197
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R+V EA+ + E E + METSA DSTNV++AF + E+ N S
Sbjct: 124 GNKCDLENIRDVSVEEAKCLAE--AEGLFFMETSALDSTNVKKAFEIVIREIYNNVS--- 178
Query: 78 CNEPINTDNTNSPITL--------SNDTKSIRNKCNC 106
+ +N+D + ++L ND+K ++ +C
Sbjct: 179 -RKVLNSDTYKAELSLNRVTLVNNGNDSKQAQSYFSC 214
>gi|432953338|ref|XP_004085356.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Oryzias
latipes]
Length = 170
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + + VD+ A+E + +P +ETSAK +TNVE+AF +A E+K R
Sbjct: 88 GNKCDLTTRKVVDYTTAKEFADNLGIP----FLETSAKSATNVEQAFMTMAAEIKKRMG 142
>gi|410918967|ref|XP_003972956.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 224
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDLE ER+V F EA + + + +ETSAK+S NV+EAF +A EL R
Sbjct: 127 GNKCDLEEERQVTFEEACNLAKN-KGMLAALETSAKESQNVDEAFMMMARELLAR 180
>gi|32527715|gb|AAP86259.1| Ac2-048 [Rattus norvegicus]
Length = 301
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 159 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 213
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLE +R V+++ A E E +P +ETSA DSTNVE+AF +A ++K+
Sbjct: 120 GNKCDLEDKRVVEYDVAREFAEANKMP----FLETSALDSTNVEQAFLTMAKQIKD 171
>gi|15281843|gb|AAK94458.1| GTP binding protein Rab1a, partial [Rhinolophus rouxii]
Length = 94
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 10 LVGNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFTTMAAEIKKRMG 66
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++ V +A E E + ++ETSAKD+TNVE+AF +A ++K+R T+
Sbjct: 124 GNKSDLTDKKAVSTEQANEFAESIK--ISLLETSAKDATNVEQAFLTMAKQIKDRMGTTM 181
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D+ + R V ++ A+E + + I + METSAKD+TNVE+AF ++ +KNR +
Sbjct: 120 GNKSDMTTNRVVSYDTAKEFADQI-GIPF-METSAKDATNVEDAFMAMSTAIKNR----M 173
Query: 78 CNEPINTDNTNSPIT 92
++P + +N PI
Sbjct: 174 ASQP-SANNAKPPIV 187
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|296210478|ref|XP_002751979.1| PREDICTED: ras-related protein Rab-19 [Callithrix jacchus]
Length = 217
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFVLMAKELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S + + S + C C
Sbjct: 188 YGESALNGLPLDSSPVVMAQSPSEKTHCTC 217
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 121 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 175
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ R V + EE+ EY + METSAK +TNVEEAF+ LA ++K +
Sbjct: 118 ILGNKCDMNDRRNVTKEKGEELAIEYGIKF---METSAKSATNVEEAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KRL 177
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 115 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 169
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE +R V + +E + + I + +ETSAK STNVE+AF +A+++K R +
Sbjct: 149 GNKCDLEGKRVVTTEQGKEFADGLG-IEF-LETSAKTSTNVEQAFLTMASQIKAR----M 202
Query: 78 CNEPINTDNTNSPITL 93
N+P T + L
Sbjct: 203 KNQPSAAPATKPGVNL 218
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 128 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 182
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCD+ +++ VD+ A+E + +P +ETSAK++TNVE+AF +A+E+KN+
Sbjct: 120 GNKCDMTTKKVVDYTTAKEYADSLNIP----FLETSAKNNTNVEQAFLTMASEIKNK 172
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 115 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 169
>gi|426335755|ref|XP_004029375.1| PREDICTED: ras-related protein Rab-1A [Gorilla gorilla gorilla]
Length = 189
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 107 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKR 159
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V++ A+E + +P +ETSAK++TNVE+AF +A ++K++ A
Sbjct: 144 GNKSDLTSKKVVEYTVAKEFADQLGIP----FLETSAKNATNVEQAFLTMAKQIKDKMGA 199
Query: 76 TLCNEPINTDN 86
+ P + N
Sbjct: 200 SGTGGPTSKTN 210
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 116 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 170
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E Y +++ +E SAK+ TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLTTKKVVDYTTAKE---YADQLNMPFLEASAKNVTNVEQAFMTMAAEIKNR 172
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 155 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 209
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL + R V + A+ + EI METSAKD+TNVE+AF +A +KNR ++
Sbjct: 120 GNKSDLTANRAVSYETAKAFAD---EIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQ 176
Query: 77 LCN--EPINTDNTNSPITLSN 95
N P + + P+ S+
Sbjct: 177 PANNARPPTVNISGKPVGQSS 197
>gi|432953340|ref|XP_004085357.1| PREDICTED: ras-related protein Rab-1A-like isoform 3 [Oryzias
latipes]
Length = 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + + VD+ A+E + +P +ETSAK +TNVE+AF +A E+K R
Sbjct: 83 GNKCDLTTRKVVDYTTAKEFADNLGIP----FLETSAKSATNVEQAFMTMAAEIKKRMG 137
>gi|358331766|dbj|GAA50531.1| Ras-related protein RABD2a [Clonorchis sinensis]
Length = 124
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Query: 7 WPDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCL 65
+ DS + NKCDLE +R V A+ + + E+H +ETSAKD+TNVE+AF+ +
Sbjct: 34 YADSKVLRLLVGNKCDLEPKRAVPTATAKALAD---ELHMPFLETSAKDATNVEQAFFKM 90
Query: 66 ANELK-------NRQSATL 77
A ++ QSAT+
Sbjct: 91 AQQIAANATSMPGMQSATV 109
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R+V E + + E E + METSA DSTNV++AF + E+ N S
Sbjct: 124 GNKCDLENIRDVSVEEGKSLAE--AEGLFFMETSALDSTNVKKAFEIVIREIYNNVS--- 178
Query: 78 CNEPINTDNTNSPITLSNDT 97
+ +N+D + ++L+ T
Sbjct: 179 -RKVLNSDTYKAELSLNRVT 197
>gi|291386696|ref|XP_002709884.1| PREDICTED: RAB1A, member RAS oncogene family isoform 2 [Oryctolagus
cuniculus]
gi|332813298|ref|XP_003309085.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Pan troglodytes]
gi|395731757|ref|XP_003775962.1| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|397521757|ref|XP_003830954.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|221044672|dbj|BAH14013.1| unnamed protein product [Homo sapiens]
Length = 173
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 91 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 145
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD+ +R VD A +E+G +P +ETSAKD++NVE+AF +A E+K R
Sbjct: 120 GNKCDMAEKRVVDQQMAKSFADELG--IP----FLETSAKDASNVEQAFITMAGEVKRRM 173
Query: 74 SATLC--NEPINT 84
++ L N NT
Sbjct: 174 ASQLTEGNRKTNT 186
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 137 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 191
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 149 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 203
>gi|441642335|ref|XP_003262625.2| PREDICTED: ras-related protein Rab-1A [Nomascus leucogenys]
Length = 253
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 171 GNKCDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQSFMTMAAEIKKRMG 225
>gi|328874859|gb|EGG23224.1| Ras GTPase [Dictyostelium fasciculatum]
Length = 249
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLE REV E ++ + + + METSA+ N+EEAFY L E++ R+
Sbjct: 135 LVGNKCDLEHLREVSTEEGRDLAKCLGMLF--METSARTRLNIEEAFYELVREMRRRERG 192
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+ + +P +ETSAK STNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKSFADNLGIP----FLETSAKSSTNVEQAFMTMAAEIKKRMG 174
>gi|403072080|pdb|4FMD|F Chain F, Espg-Rab1 Complex Structure At 3.05 A
Length = 164
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 111 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKR 163
>gi|444728384|gb|ELW68842.1| Ras-related protein Rab-19 [Tupaia chinensis]
Length = 217
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEK-HGLLAVVETSAKESRNIDEVFVLMAKELIARNSLHL 187
Query: 78 CNE--PINTDNTNSPITLSNDTKSIRNKCNC 106
E P+ ++P+ + R K +C
Sbjct: 188 YGESAPLGPPLDSTPVLTAQGP---RGKAHC 215
>gi|281354391|gb|EFB29975.1| hypothetical protein PANDA_017521 [Ailuropoda melanoleuca]
Length = 173
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 91 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 145
>gi|281207032|gb|EFA81216.1| Ras GTPase [Polysphondylium pallidum PN500]
Length = 190
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLESER+V E +++ + P +ETSAK NVEE FY L E++
Sbjct: 113 VVGNKCDLESERQVTTGEGQDLAKSFGCP----FLETSAKIRVNVEEGFYTLVREIRK 166
>gi|281200588|gb|EFA74806.1| Ras GTPase [Polysphondylium pallidum PN500]
Length = 190
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLESER+V E +++ + P +ETSAK NVEE FY L E++
Sbjct: 113 VVGNKCDLESERQVTTGEGQDLAKSFGCP----FLETSAKIRVNVEEGFYTLVREIRK 166
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NKCDL REV +E EE+ + + ETSA D +NVEEAF L ++ + S
Sbjct: 120 VIGNKCDLSQTREVQTSEGEELAK--KNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNK 103
++ E NT N P T D S NK
Sbjct: 178 SVDGEQSNT-NEIKPATEPIDLGSQNNK 204
>gi|297301825|ref|XP_002805860.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Macaca
mulatta]
Length = 176
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 94 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 148
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD+ +R VD A +E+G +P +ETSAKD++NVE+AF +A E+K R
Sbjct: 120 GNKCDMTEKRVVDQQMAKSFADELG--IP----FLETSAKDASNVEQAFLTMAGEVKRRM 173
Query: 74 SATLC--NEPINT 84
++ L N NT
Sbjct: 174 ASQLTEGNRKANT 186
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 164 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 218
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 17/93 (18%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELG--IP----FLETSAKDSINVEQAFLTMAGEIKKKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
S N+P T N NS T+ + I K NC
Sbjct: 174 S----NQP--TAN-NSTGTVQMKGQPIEQKNNC 199
>gi|301756779|ref|XP_002914238.1| PREDICTED: ras-related protein Rab-19-like [Ailuropoda melanoleuca]
Length = 217
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFMLMARELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L + +C C
Sbjct: 188 FGESALNSLAPDSRPVLVAQGPREKTQCTC 217
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|393911208|gb|EJD76212.1| hypothetical protein LOAG_16781 [Loa loa]
Length = 292
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 13 DSRVWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
D + NKCD+E R+V E++ EY + METSAK + NVEEAF+ LA ++K
Sbjct: 198 DRMIIGNKCDVEERRQVSRERGEQLAIEYGTKF---METSAKANINVEEAFFTLARDIK 253
>gi|350595166|ref|XP_003484053.1| PREDICTED: ras-related protein Rab-19-like [Sus scrofa]
Length = 161
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 15 RVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
R+ NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S
Sbjct: 71 RLLGNKCDLWEKRHVLFEDACTLAEKY-GLLAVLETSAKESKNIDEVFVLMARELIARNS 129
Query: 75 ATLCNEPINTDNTNSPITLSND---TKSIRNKCNC 106
P+ + S + L + T S R K C
Sbjct: 130 L-----PLYAEGALSSLPLDSSPVLTVSPREKTQC 159
>gi|428182225|gb|EKX51086.1| hypothetical protein GUITHDRAFT_85102 [Guillardia theta CCMP2712]
Length = 215
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DL+ ER+V+ +EAEE V H+ +TSAK +EE F LA ++ ++
Sbjct: 119 IAGNKIDLDKERQVEKSEAEEYAASVGAYHF--QTSAKLGKGIEETFLALAKKMIEQRQE 176
Query: 76 TLCNEPINTDNTNSPI-TLSNDTK-------SIRNKCNC 106
+ N+PI +++DT S CNC
Sbjct: 177 NDSRQSARRSGGNAPILVVADDTSNGGSGAASGSKACNC 215
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL+ +R V+++ A+E + +P +ETSA DSTNVE+AF +A ++K S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMP----FLETSALDSTNVEDAFLTMARQIKESMSQ 175
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
NE + L + + C C
Sbjct: 176 QNLNETTQKKEDKGNVNLKGQSLTNTGGCCC 206
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 171 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 225
>gi|410907910|ref|XP_003967434.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 384
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL+++R+V F +A + E + V+ETSAK++ NVE AF +A EL R +
Sbjct: 294 GNKSDLQAQRQVLFEDACTLAENNGALA-VLETSAKEAQNVEAAFTLMARELLARNGTNM 352
Query: 78 CNEPINTDNTNSP-ITLSNDTKSIRN------KCNC 106
E + +SP + LSN + SI KC C
Sbjct: 353 AEEFLR----DSPQLMLSNSSHSILGTGASDKKCGC 384
>gi|330822610|ref|XP_003291742.1| hypothetical protein DICPUDRAFT_92731 [Dictyostelium purpureum]
gi|325078062|gb|EGC31735.1| hypothetical protein DICPUDRAFT_92731 [Dictyostelium purpureum]
Length = 189
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLES+R+V E +++ + P +ETSAK NVEEAFY L E++
Sbjct: 113 VVGNKCDLESDRQVTTGEGQDLAKSFGCP----FLETSAKIRVNVEEAFYSLVREIRK 166
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL + R V + ++ + + I + +ETSAK++TNVEEAF +A+E+K R ++
Sbjct: 120 GNKCDLTTRRVVSYQTGKDFADSLG-IPF-LETSAKNATNVEEAFMTMASEIKKRMAS 175
>gi|281200877|gb|EFA75091.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL S+R VDF A++ + +P ++ETSAKDST +++AF LA +K
Sbjct: 150 IVGNKCDLNSKRAVDFKVAKKFSDDLNIP----ILETSAKDSTGIDDAFTQLAANIKK 203
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ V A+ + + I + METSAK++TNVE+AF +A +KNR +
Sbjct: 120 GNKCDLTAQKVVSTETAQAFADEIG-IPF-METSAKNATNVEQAFMAMAASIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--ASNNARPPTVQIRGQPVNQKSGC 200
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 128 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKR 180
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK DL +++ VD+ A+ + + I + +ETSAK++TNVE+AF +A E+KNR S
Sbjct: 120 GNKSDLTAKKVVDYQTAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNRMASQP 177
Query: 77 LCNEP 81
+ N+P
Sbjct: 178 VINKP 182
>gi|330799117|ref|XP_003287594.1| Rab GTPase [Dictyostelium purpureum]
gi|325082380|gb|EGC35863.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL+ +R VDF A++ + +P +METSAK+ST +++AF LA+++K
Sbjct: 143 IVGNKCDLKDKRNVDFKVAKKFADELNIP----IMETSAKESTAIDDAFIKLASDIKK 196
>gi|16550778|dbj|BAB71048.1| unnamed protein product [Homo sapiens]
gi|119620326|gb|EAW99920.1| RAB1A, member RAS oncogene family, isoform CRA_d [Homo sapiens]
Length = 141
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 59 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 113
>gi|75812956|ref|NP_001028800.1| ras-related protein Rab-1A [Bos taurus]
gi|73586795|gb|AAI03437.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|148675883|gb|EDL07830.1| RAB1, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149044749|gb|EDL97935.1| rCG23301, isoform CRA_c [Rattus norvegicus]
gi|296482422|tpg|DAA24537.1| TPA: GTP binding protein Rab1a [Bos taurus]
Length = 173
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 91 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 145
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 118 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKR 170
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DLE+++ VD A+ GE+ ++ +ETSAK++TNVE+AF +A ++K++ A
Sbjct: 158 GNKSDLETKKVVD---AKTAGEFATQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGA 213
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ V A+ + + I + METSAK++TNVE+AF +A +KNR +
Sbjct: 120 GNKCDLTAQKVVSTETAQAFADEIG-IPF-METSAKNATNVEQAFMAMAASIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--ASNNARPPTVQIRGQPVNQKSGC 200
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 118 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKR 170
>gi|292627974|ref|XP_683305.2| PREDICTED: ras-related protein Rab-19-like [Danio rerio]
Length = 225
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE++R+V F +A + E + +ETSAK N+EEAF +A EL R
Sbjct: 135 GNKCDLEAQRQVLFEDACTLAERSGAL-AALETSAKHHHNIEEAFQLMARELLVRHGGI- 192
Query: 78 CNEPINTDNTNSP-ITLSNDTKSI------RNKCNC 106
+ ++SP + L +D+ I + C+C
Sbjct: 193 ---HYQDNQSDSPTVYLHSDSHPIEGEQLEKRSCDC 225
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R+V E + + E E + METSA DSTNV++AF + E+ N +
Sbjct: 124 GNKCDLENIRDVTVEEGKSLAE--AEGLFFMETSALDSTNVKKAFEIVIREIYN----NV 177
Query: 78 CNEPINTDNTNSPITLSNDT 97
+ +N+D + ++L+ T
Sbjct: 178 SRKVLNSDTYKAELSLNRVT 197
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 175 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 229
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 177
>gi|78522573|gb|ABB46196.1| YptC1 [Chlamydomonas incerta]
Length = 157
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S++ V+++ A+ + + I + +ETSAK++TNVE+AF +A E+KNR +
Sbjct: 91 GNKSDLTSKKVVEYSVAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNR----M 144
Query: 78 CNEPINT 84
++PI T
Sbjct: 145 ASQPIPT 151
>gi|268529446|ref|XP_002629849.1| C. briggsae CBR-RAB-39 protein [Caenorhabditis briggsae]
Length = 229
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
KCD+E++R+V++ E GEY + H + +ETS++ NV EAF+ +A E++NR
Sbjct: 134 GTKCDMEAQRQVNYEE----GEYFAKYHKMKFIETSSRSGDNVNEAFHMIAQEIQNR 186
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NKCDL REV E EE+ + + ETSA D +NVEEAF L ++ + S
Sbjct: 120 VIGNKCDLSQTREVQTTEGEELAK--KNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNK 103
++ E NT N P T D S NK
Sbjct: 178 SVDGEQSNT-NEIKPATEPIDLGSQNNK 204
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 14 SRVW-SNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANEL 69
SR+ NK D+E R+V +E +E+ E HY +ETSAKD NVEEAF + E+
Sbjct: 115 SRILVGNKSDMEDARQVSTDEGKELAE-----HYNVRFLETSAKDCKNVEEAFTMMTREI 169
Query: 70 KNRQSAT 76
K+R + T
Sbjct: 170 KSRVAIT 176
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKC+L S+R+V ++E GE + I Y METSAK S NVEEAF+ LA ++K +
Sbjct: 118 LLGNKCELTSKRQV----SKERGEALA-IEYGIKFMETSAKSSINVEEAFFTLARDIKAK 172
Query: 73 QSATL 77
L
Sbjct: 173 MEKRL 177
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKC+L S+R+V ++E GE + I Y METSAK S NVEEAF+ LA ++K +
Sbjct: 118 LLGNKCELTSKRQV----SKERGEALA-IEYGIKFMETSAKSSINVEEAFFTLARDIKAK 172
Query: 73 QSATL 77
L
Sbjct: 173 MEKRL 177
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA-- 75
NK DL +++ VD+ A+ + + I + +ETSAK++TNVEEAF +A E+KNR ++
Sbjct: 120 GNKSDLTAKKVVDYQTAKAFADEIG-IPF-LETSAKNATNVEEAFMKMAGEIKNRMASQP 177
Query: 76 TLCNEP 81
L N P
Sbjct: 178 ALNNGP 183
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 17/93 (18%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELG--IP----FLETSAKDSINVEQAFLTMAGEIKKK- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N+P + +T T+ + I K NC
Sbjct: 173 ---MGNQPTASKSTG---TVQMKGQPIEQKNNC 199
>gi|464547|sp|P34729.1|RAS1_PHYPO RecName: Full=Ras-like protein 1; Flags: Precursor
gi|310554|gb|AAB05646.1| ras1 protein [Physarum polycephalum]
gi|551495|gb|AAB06296.1| Ppras1 protein precursor [Physarum polycephalum]
Length = 189
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLE ER+V E +++ P METSAK NVEE+FY L E++
Sbjct: 113 VVGNKCDLEGERQVTTGEGQDLARSFGCP----FMETSAKSRVNVEESFYQLVREIRK 166
>gi|167869|gb|AAA33245.1| ras protein [Dictyostelium discoideum]
Length = 186
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NK DL+ ER+V NE +E+ + H E+SAK NVEEAFY L E++
Sbjct: 113 LVGNKADLDHERQVSVNEGQELAKDSLSFH---ESSAKSRINVEEAFYSLVREIRK 165
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 10 SAHDSR-VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLA 66
SA SR + NKCD+E++R+V ++E GE + + H + ETSAK S NVEE+F LA
Sbjct: 111 SAGVSRMLLGNKCDIEAKRKV----SKETGEKLAKDHGIRFFETSAKSSINVEESFLSLA 166
Query: 67 NELKNRQS 74
+++ + S
Sbjct: 167 HDILQKSS 174
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 175 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 229
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL ++ VD A +E+G +P +ETSAKD++NVE+AF +A E+K R
Sbjct: 120 GNKCDLTEKQAVDQQMAKSFADELG--IP----FLETSAKDASNVEQAFLTMAGEVKRRM 173
Query: 74 SATLC--NEPINT 84
++ L N NT
Sbjct: 174 ASQLTEGNRKANT 186
>gi|281212380|gb|EFA86540.1| hypothetical protein PPL_00339 [Polysphondylium pallidum PN500]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL++ER+V E +EM + P METSAK NVEEAFY L E++
Sbjct: 113 LVGNKCDLDNERQVSTTEGQEMAKSYSCP----FMETSAKSRVNVEEAFYELVREIRK 166
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTSKKVVEYSVAKEFADQLTIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 T 76
T
Sbjct: 177 T 177
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DL+ EREV+ ++ E + + +ETSA D TNVE+AF L ++ +++A
Sbjct: 118 IVGNKADLKQEREVNTSDGTEFAQ--KHSAFFIETSALDGTNVEKAFSDLLIQIYKKKNA 175
Query: 76 TLCNEPINTDNTN 88
TL ++ + +DN+
Sbjct: 176 TLKSDSVPSDNSK 188
>gi|380023908|ref|XP_003695751.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Apis florea]
Length = 208
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 117 LLGNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 173
Query: 75 ATL 77
L
Sbjct: 174 KKL 176
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELK---NR 72
NKCDLE +R V+++ A+E + +P +ETSA +STNVEEAF +A ++K N+
Sbjct: 120 GNKCDLEDKRVVEYDVAKEFADSNKMP----FLETSALNSTNVEEAFLTMARQIKESMNQ 175
Query: 73 QSATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
Q N + NS + L+ + C
Sbjct: 176 QKMEDSNAASKGGDKNSNVNLTGGQSLTNSSSGC 209
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELTDKRQVTKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|7438362|pir||JC6328 Ras2 protein - slime mold (Dictyostelium discoideum)
Length = 191
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL++ER V E G+ + P +ETSAK NVEEAFY L E++N
Sbjct: 113 LIGNKCDLDTERVVSIAEGGRKGKSIGCP----FLETSAKIRVNVEEAFYSLVREIRN 166
>gi|380023910|ref|XP_003695752.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Apis florea]
Length = 186
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 95 LLGNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 151
Query: 75 ATL 77
L
Sbjct: 152 KKL 154
>gi|213407658|ref|XP_002174600.1| ras-like protein [Schizosaccharomyces japonicus yFS275]
gi|212002647|gb|EEB08307.1| ras-like protein [Schizosaccharomyces japonicus yFS275]
Length = 219
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLE REV E E+M + + +ETSAK NVEEAFY L ++
Sbjct: 119 LVGNKCDLEDSREVSREEGEQMAHMMGCTY--VETSAKFRLNVEEAFYDLVRTIRRFNKV 176
Query: 76 TLCNEPINTDNTNSPITLSNDTK 98
+ P NTN+ + ++ K
Sbjct: 177 EEGSNPAPQPNTNARVGAASAAK 199
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTSKKVVEYSVAKEFADQLSIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
T +T +P
Sbjct: 177 TSTPSGAAKSSTVTP 191
>gi|320162870|gb|EFW39769.1| ras family protein [Capsaspora owczarzaki ATCC 30864]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ +NKCDLES+R+V E + + +P METSAK T VE+AFY L E++
Sbjct: 113 LVANKCDLESDRQVSHTEGQATAKQFGIP----FMETSAKTRTRVEDAFYTLVREIRR 166
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 13 DSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELK 70
D + NKCD+ +R V ++E GE + H + METSAK S NVE+AF+ LA ++K
Sbjct: 115 DKMILGNKCDMNDKRVV----SKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIK 170
Query: 71 NRQSATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ L E N N+ T++ ++ C
Sbjct: 171 AKMDRKL--ESSNAQAKNAGGITPGKTQAKKSGWRC 204
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|306014463|gb|ADM76285.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014489|gb|ADM76298.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014507|gb|ADM76307.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014519|gb|ADM76313.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014533|gb|ADM76320.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD+ +R VD A +E+G +P +ETSAKD++NVE+AF +A E+K R
Sbjct: 42 GNKCDMAEKRVVDQQMAKSFADELG--IP----FLETSAKDASNVEQAFLTMAGEVKRRM 95
Query: 74 SATL 77
++ L
Sbjct: 96 ASQL 99
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ R V + EE+ EY + METSAK S NVEEAF+ LA ++K +
Sbjct: 118 ILGNKCDMNDRRNVTKEKGEELAIEYGIKF---METSAKSSINVEEAFFTLARDIKAKME 174
Query: 75 ATLCNEPINTDNTNSPITLSNDTKSIRN 102
L E N + L D RN
Sbjct: 175 KRL-QEASNPPRQDRGHQLGKDDGRGRN 201
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL S+R V +E +E+ + I ++ ETSAK++ NVE+AF+ +A E+K R
Sbjct: 120 GNKCDLVSKRVVTSDEGKELADSYG-IKFI-ETSAKNAYNVEQAFHTMAGEIKKR 172
>gi|306014457|gb|ADM76282.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014459|gb|ADM76283.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014461|gb|ADM76284.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014465|gb|ADM76286.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014467|gb|ADM76287.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014471|gb|ADM76289.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014473|gb|ADM76290.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014475|gb|ADM76291.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014477|gb|ADM76292.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014479|gb|ADM76293.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014481|gb|ADM76294.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014483|gb|ADM76295.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014485|gb|ADM76296.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014487|gb|ADM76297.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014491|gb|ADM76299.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014493|gb|ADM76300.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014495|gb|ADM76301.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014497|gb|ADM76302.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014499|gb|ADM76303.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014501|gb|ADM76304.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014503|gb|ADM76305.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014505|gb|ADM76306.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014509|gb|ADM76308.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014511|gb|ADM76309.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014513|gb|ADM76310.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014515|gb|ADM76311.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014517|gb|ADM76312.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014521|gb|ADM76314.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014523|gb|ADM76315.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014525|gb|ADM76316.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014527|gb|ADM76317.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014529|gb|ADM76318.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014531|gb|ADM76319.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014535|gb|ADM76321.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014537|gb|ADM76322.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014539|gb|ADM76323.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014541|gb|ADM76324.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014543|gb|ADM76325.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014545|gb|ADM76326.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014547|gb|ADM76327.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014549|gb|ADM76328.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 12/73 (16%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD+ +R VD A +E+G +P +ETSAKD++NVE+AF +A E+K R
Sbjct: 42 GNKCDMAEKRVVDQQMAKSFADELG--IP----FLETSAKDASNVEQAFLTMAGEVKRRM 95
Query: 74 SATLC--NEPINT 84
++ L N NT
Sbjct: 96 ASQLTEGNRKTNT 108
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DL+ EREV+ ++ E + + +ETSA + TNVE+AF L ++ +++A
Sbjct: 118 IVGNKADLKQEREVNTSDGTEFAQ--KHSAFFIETSALEGTNVEKAFSDLLIQIYKKKNA 175
Query: 76 TLCNEPINTDNTN 88
TL N+ + +DN+
Sbjct: 176 TLKNDSVPSDNSK 188
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NKCD +++ VD+ A+E Y +++ +ETSAK++TNVE+AF +A+E+KNR
Sbjct: 120 GNKCDEVTKKVVDYTTAKE---YADQLNIPFLETSAKNATNVEQAFMTMASEIKNR 172
>gi|345484022|ref|XP_001599973.2| PREDICTED: ras-related protein Rab-3-like [Nasonia vitripennis]
Length = 256
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+E ER + F +++ E++ ++ + ETSAK++TNV+ F L + + ++ S +L
Sbjct: 166 GNKCDMEDERVISFERGKQLAEHL-KVQF-FETSAKENTNVKAVFETLVDIICDKMSESL 223
Query: 78 CNEP 81
N+P
Sbjct: 224 DNDP 227
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S++ VD+ A+ + + I + +ETSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKSDLASKKVVDYATAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P +T+ P + ++I K C
Sbjct: 174 ASQP-ALSSTSRPNNVQLRGQTILPKGGC 201
>gi|323450829|gb|EGB06708.1| hypothetical protein AURANDRAFT_71930 [Aureococcus anophagefferens]
Length = 600
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDL S+R V +A+E + + I Y +ETSAK+STNVE+AF +A +++
Sbjct: 519 NKCDLASKRAVPTEQAQEFADSL-GIQY-LETSAKNSTNVEKAFTTMAGQIR 568
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ + P+ ++
Sbjct: 173 LNRKMNDS--NSSGSGGPVKIT 192
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL+ +R V+++ A+E + +P +ETSA DSTNVE+AF +A ++K S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMP----FLETSALDSTNVEDAFLTMARQIKQSMSQ 175
Query: 76 TLCNEP 81
NE
Sbjct: 176 QNLNET 181
>gi|340501528|gb|EGR28304.1| Ras family protein, putative [Ichthyophthirius multifiliis]
gi|340507795|gb|EGR33697.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
+ +NKCD++ ER+V E E++ E ++Y ETSAKD N+ EAF C+A +
Sbjct: 121 IIANKCDMKDERKVSTKEGEDLAEKY-NVNY-FETSAKDGLNIREAFRCIAKQ 171
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQS-- 74
NK D +ER V+++ A+E Y ++ +ETSAK+STNVE+AF +A E+K R S
Sbjct: 118 GNKSDRTAERAVEYDTAKE---YADQLGIPFLETSAKNSTNVEQAFLTMAGEIKRRLSHA 174
Query: 75 -ATLCNEPINTDNTNSPI 91
T T++P+
Sbjct: 175 VGTAAGAQPGVRITSTPV 192
>gi|306014455|gb|ADM76281.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014469|gb|ADM76288.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 124
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD+ +R VD A +E+G +P +ETSAKD++NVE+AF +A E+K R
Sbjct: 42 GNKCDMAEKRVVDQQMAKSFADELG--IP----FLETSAKDASNVEQAFITMAGEVKRRM 95
Query: 74 SATL 77
++ L
Sbjct: 96 ASQL 99
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ VD+ A+ + + I + +ETSAK++TNVE+AF +A E+KNR ++
Sbjct: 120 GNKSDLASKKVVDYETAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNRMAS 175
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
+KCDL +++ VD+ A+E Y ++ +E SAK++TNVE+AF +A E+KNR
Sbjct: 120 GDKCDLTTKKVVDYTTAKE---YADQLSMPFLEASAKNATNVEQAFMTMAAEIKNR 172
>gi|355714980|gb|AES05184.1| RAB8B, member RAS oncoprotein family [Mustela putorius furo]
Length = 166
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 77 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 131
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ + P+ ++
Sbjct: 132 LNRKMNDS--NSSGSGGPVKIT 151
>gi|324527545|gb|ADY48803.1| Ras-related protein Ral-a [Ascaris suum]
Length = 175
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL SER V +A++ E VP I ETSAK TNV++ FY L E+K R+
Sbjct: 94 GNKCDLNSERCVMQIQAQQRAEQWGVPYI----ETSAKHRTNVDKVFYDLMREIKRRKGG 149
Query: 76 TLCNEPINTDNTNSP 90
TL N N+P
Sbjct: 150 TL--------NANAP 156
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELTDKRQVTKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Query: 10 SAHDSR-VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLA 66
SA SR + NKCD+E++R+V ++E GE + + H + ETSAK S NVEE+F LA
Sbjct: 111 SAGVSRMLLGNKCDIEAKRKV----SKETGEKLAKDHGIRFFETSAKSSINVEESFLALA 166
Query: 67 NELKNRQS 74
++ + S
Sbjct: 167 RDILKQSS 174
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ +R+V + E++ EY + METSAK S NVE+AF+ LA ++K +
Sbjct: 118 ILGNKCDMNDKRQVSKDRGEQLAIEYGIKF---METSAKASINVEDAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + +P +E SAK +TNVE+AF +A E+K R
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADNLGIP----FLEASAKSATNVEQAFMTMAAEIKKRMG 174
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Query: 10 SAHDSR-VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLA 66
SA +R + NKCD+E++R+V ++E GE + + H + ETSAK S NVEE+F LA
Sbjct: 111 SAGVTRMLLGNKCDVEAKRKV----SKETGETLAKEHAIRFFETSAKSSINVEESFQALA 166
Query: 67 NELKNRQSATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
++ Q +T + P T + ++++T+ +KC
Sbjct: 167 RDI--LQKSTKKSGP-----TGREVKITSNTQQKSSKC 197
>gi|339237897|ref|XP_003380503.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976629|gb|EFV59881.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 197
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK D +ER V+++ A+E + +P +ETSAK+STNVE+AF +A E+K R S
Sbjct: 115 GNKSDRTAERAVEYDTAKEYADQLGIP----FLETSAKNSTNVEQAFLTMAGEIKRRLS 169
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
V NKCDLE REV EAEE + Y ETSA D TNVE+AF + + +RQ
Sbjct: 117 VIGNKCDLEQMREVTTEEAEEFAKKTG--SYFFETSAMDGTNVEKAFMQMIETICDRQ 172
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ R V + EE+ EY + METSAK S NVEEAF+ LA ++K +
Sbjct: 118 ILGNKCDMNDRRNVTKEKGEELAIEYGIKF---METSAKSSINVEEAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KRL 177
>gi|340546053|gb|AEK51825.1| RAS oncogene family protein RAB1A [Ichthyophis bannanicus]
Length = 133
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE+AF +A E+K
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQAFMTMAAEIK 133
>gi|74000847|ref|XP_853228.1| PREDICTED: ras-related protein Rab-8B [Canis lupus familiaris]
Length = 195
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 106 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 160
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ + P+ ++
Sbjct: 161 LNRKMNDS--NSSGSGGPVKIT 180
>gi|341874146|gb|EGT30081.1| hypothetical protein CAEBREN_09471 [Caenorhabditis brenneri]
Length = 218
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL+ ER+VDF+ AE++ + Y E SAK N EEAF+ L ++ R +A+
Sbjct: 119 GNKADLDQERKVDFDRAEKLASRLGVSLY--EVSAKTGINCEEAFHTLTAAMRERLTASS 176
Query: 78 CNEPINTDN 86
N + DN
Sbjct: 177 LNSDESDDN 185
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
D+A + NKCDLE+ R+V E + + E E + METSA DSTNV AF + E
Sbjct: 116 DTATVRMLVGNKCDLENIRDVSVEEGKNLAE--EEGLFFMETSALDSTNVRTAFELVIRE 173
Query: 69 LKNRQSATLCN-EPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N S + N + + + + ++L++ S + +C
Sbjct: 174 IYNNVSRKVLNSDSYKAELSENRVSLADGGASSKKGFSC 212
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
D+A + NKCDLE R V E + + E E + METSA D+TNV++AF + E
Sbjct: 115 DTAVAQMLVGNKCDLEDIRAVSVEEGKALAE--EEGLFFMETSALDATNVDKAFEIVIRE 172
Query: 69 LKNRQSATLCN 79
+ N S L N
Sbjct: 173 IFNNVSRKLLN 183
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ V+++ A+E + +P +ETSAKDSTNVE+AF ++ ++K R
Sbjct: 120 GNKSDMVDKKVVEYSVAKEFADSLNIP----FLETSAKDSTNVEQAFLTMSRQIKER--- 172
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N + N S + + T ++ NC
Sbjct: 173 -MGNNTFASSNAKSSVKVGQGTNVSQSSSNC 202
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDS NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTETAKAFADELG--IP----FLETSAKDSINVEQAFLTMAGEIKKK- 172
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N+P T ++S + + + I+ NC
Sbjct: 173 ---MGNQPNATARSSSTVQMKG--QPIQQNSNC 200
>gi|126340875|ref|XP_001375267.1| PREDICTED: ras-related protein Rab-19-like [Monodelphis domestica]
Length = 217
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V F +A + E + V+ETSAK+S N++E F +A EL R +
Sbjct: 129 GNKADLWDKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFMLMARELIARNDLSF 187
Query: 78 CNEPI--NTDNTNSPITLSNDTKSIRNKCNC 106
E N +SPI L+ S +N CNC
Sbjct: 188 YGESPQNNLLLDSSPILLAPSPNS-KNHCNC 217
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
D+A + NKCDLE R V E + + E E + METSA D+TNV++AF + E
Sbjct: 115 DTAVAQMLVGNKCDLEDIRAVSVEEGKALAE--EEGLFFMETSALDATNVDKAFEIVIRE 172
Query: 69 LKNRQSATLCN 79
+ N S L N
Sbjct: 173 IFNNVSRKLLN 183
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ VD A++ + + I + +ETSAK+STNVEEAF +A+ +K R + +
Sbjct: 120 GNKCDLVTKKAVDTQMAKDFADSLG-IPF-LETSAKNSTNVEEAFIQMASGIKTRLAVSG 177
Query: 78 CNEPINTDNTNSP 90
+ ++ N +P
Sbjct: 178 ETKSVSRPNLQNP 190
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR---Q 73
NK DL + R V + A+ + EI +ETSAKD+TNVE+AF + +KNR Q
Sbjct: 120 GNKADLTANRVVSYETAKAFAD---EIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQ 176
Query: 74 SATLCNEPINTDNTNSPITLSN 95
A+ +P + P+T S
Sbjct: 177 PASNSAKPPTVNIRGQPVTQSG 198
>gi|397569787|gb|EJK46965.1| hypothetical protein THAOC_34347 [Thalassiosira oceanica]
Length = 206
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 14 SRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+R NK DLE+ R+VDFNEA + E +H METSAK++ NV+ F +A +L Q
Sbjct: 128 TRQAGNKADLEARRKVDFNEANDYAEENGILH--METSAKNANNVKSLFVEIAKKLPKAQ 185
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ V+++ A+E + +P +ETSAKDSTNVE+AF ++ ++K R
Sbjct: 123 GNKSDMVDKKVVEYSVAKEFADSLNIP----FLETSAKDSTNVEQAFLTMSRQIKER--- 175
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ N + N S + + T ++ NC
Sbjct: 176 -MGNNTFASSNAKSSVKVGQGTNVSQSSSNC 205
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDL +R V+++ A+E E +P +ETSA DSTNVEEAF +A ++K
Sbjct: 120 GNKCDLNDKRVVEYDVAKEFAEANKMP----FLETSALDSTNVEEAFLTMARQIK 170
>gi|225717530|gb|ACO14611.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ R V + EE+ EY + METSAK S NVEEAF+ LA ++K +
Sbjct: 118 ILGNKCDMNDRRNVTKEKGEELAIEYGIKF---METSAKSSINVEEAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KRL 177
>gi|403419531|emb|CCM06231.1| predicted protein [Fibroporia radiculosa]
Length = 202
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 118 GNKSDLTSKKVVEYSAAKEFADQLTIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 173
Query: 76 TLCNEPINTDNTNSPIT 92
+ + + +S IT
Sbjct: 174 S--SSTVGGTGKSSTIT 188
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+NKCDLES+REV+ E E++ E + +ETSAK S N+ E FY +A L Q
Sbjct: 122 ANKCDLESKREVNTQEGEKLSE--ENGMFFIETSAKTSLNINELFYEIAKRLAIAQ 175
>gi|308495033|ref|XP_003109705.1| hypothetical protein CRE_07553 [Caenorhabditis remanei]
gi|308245895|gb|EFO89847.1| hypothetical protein CRE_07553 [Caenorhabditis remanei]
Length = 218
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL+ ER+VDF+ AE++ + Y E SAK N EEAF+ L ++ R +A+
Sbjct: 119 GNKADLDQERKVDFDRAEKLASRLGVSLY--EVSAKTGINCEEAFHTLTAAMRERLTASS 176
Query: 78 CNEPINTDN 86
N + DN
Sbjct: 177 MNSDESDDN 185
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLE REV E E+M + + + ETSA D NVE AF + ++ + Q+
Sbjct: 119 IVGNKCDLEQMREVTIKEGEDMAKKIG--AFFFETSALDGKNVETAFMAIIQKICDEQTR 176
Query: 76 TLCNE------PINTDNTNSPITLSNDTKSIRNKCNC 106
+E PI+ + T +N C C
Sbjct: 177 LRASETKPVIKPISDSKVDIDKTPEEQQTPKKNGCAC 213
>gi|117939063|dbj|BAF36685.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 190
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ VD+N +++ + I + +ETSAK++TNVE+AF +A E+ + +A
Sbjct: 110 GNKCDLVNKKVVDYNTGKQLADSFG-ISF-LETSAKNATNVEQAFQTMATEIM-KHTAPR 166
Query: 78 CNEPINT 84
+ PI T
Sbjct: 167 NDGPIGT 173
>gi|299749824|ref|XP_001836360.2| Ras protein [Coprinopsis cinerea okayama7#130]
gi|298408615|gb|EAU85544.2| Ras protein [Coprinopsis cinerea okayama7#130]
Length = 266
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSNLVREIRK- 173
Query: 73 QSATLCNEPI 82
+T N+P+
Sbjct: 174 --STGNNKPV 181
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ R+V + E++ EY + METSAK S NVEEAF+ LA ++K +
Sbjct: 118 ILGNKCDINDRRKVTKEKGEDLAIEYGIKF---METSAKSSINVEEAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KRL 177
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL S+R V +E E+ + I ++ ETSAK++ NVE+AF+ +A E+K R
Sbjct: 120 GNKCDLVSKRVVTSDEGRELAD-SHGIKFI-ETSAKNAYNVEQAFHTMAGEIKKR 172
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +++ VD A++ + + I + +ETSAK+STNVEEAF +A+ +K R + +
Sbjct: 120 GNKCDLVTKKVVDTQMAKDFADSLG-IPF-LETSAKNSTNVEEAFIQMASGIKARLAVSG 177
Query: 78 CNEPINTDNTNSPITLSND 96
+ + N +P T D
Sbjct: 178 EAKSVTRPNLQNPPTAKKD 196
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|328793458|ref|XP_003251880.1| PREDICTED: ras-related protein Rab-8A-like [Apis mellifera]
Length = 152
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 62 GNKCELTEKRQVSKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKMEKK 118
Query: 77 L 77
L
Sbjct: 119 L 119
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V +AEE+ + + I Y+ ETSAK + +VEEAF + E++NR
Sbjct: 122 GNKTDLTEQRVVTRQQAEELAQRLG-IPYI-ETSAKTADHVEEAFVMMTKEIRNRTGNLA 179
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ + S + + +T+ + C
Sbjct: 180 LAKGSGAGTSRSGVDVRAETEQVSQSGGC 208
>gi|440802097|gb|ELR23036.1| Ras GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 188
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDLE +REV +E ++ VP ETSA STN+EEAF+ L ++ +
Sbjct: 103 IVGNKCDLEEKREVAVSEGRDLATSYGVP----FFETSALTSTNIEEAFFALVRAVRRHR 158
Query: 74 SA 75
S
Sbjct: 159 SG 160
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DLES+R+V + E +E+ + + I ++ E SAK +TNV++AF LAN +K +
Sbjct: 122 GNKADLESKRQVTYEEGKELADSLG-IKFI-EASAKANTNVDQAFMTLANNIKAK 174
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ R+V + E++ EY + METSAK S NVEEAF+ LA ++K +
Sbjct: 118 ILGNKCDINDRRKVTKEKGEDLAIEYGIKF---METSAKSSINVEEAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KRL 177
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DLES+R+V + E +E+ + + I ++ E SAK +TNV++AF LAN +K +
Sbjct: 122 GNKADLESKRQVTYEEGKELADSLG-IKFI-EASAKANTNVDQAFMTLANNIKAK 174
>gi|268577759|ref|XP_002643862.1| Hypothetical protein CBG02097 [Caenorhabditis briggsae]
Length = 223
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL+ ER+VDF+ AE + + Y E SAK N EEAF+ L ++ R +A+
Sbjct: 124 GNKADLDQERKVDFDRAERLASRLGVSLY--EVSAKTGINCEEAFHTLTAAMRERLTASS 181
Query: 78 CNEPINTDN 86
N + DN
Sbjct: 182 LNSDESDDN 190
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ REV E + + E E + METSA DSTNV AF + E+ +++
Sbjct: 125 GNKCDLENIREVPVEEGKALAE--SEGLFFMETSALDSTNVNTAFELVIKEIY----SSV 178
Query: 78 CNEPINTDNTNSPITL 93
+ +N+D+ + +TL
Sbjct: 179 SRKILNSDSYKAELTL 194
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL+ +R V+++ A+E + +P +ETSA DSTNVE+AF +A ++K S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMP----FLETSALDSTNVEDAFLTMARQIKESMSQ 175
Query: 76 TLCNEP 81
NE
Sbjct: 176 QNLNET 181
>gi|348577329|ref|XP_003474437.1| PREDICTED: ras-related protein Rab-17-like [Cavia porcellus]
Length = 212
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE +R+V E +E E + METSA+ + V E F +A EL R A L
Sbjct: 129 GNKTDLEEKRQVTLQEGKEFAESRGLLF--METSARLNHQVSEIFSAVAQELLQRDMARL 186
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
+ P+ NS N + R KC
Sbjct: 187 GSSPLG----NSGAMRLNQAPTRRTKC 209
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL ++ VD + A E + V I + +ETSAK S NVE+AF +A+E+K Q
Sbjct: 120 GNKCDLIEKKIVDTSTAREYADSVG-IPF-LETSAKSSANVEQAFMIMASEIKKLQGGI- 176
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P N N+ + I K C
Sbjct: 177 --QPNNNSTYNAHVVKPTGFTPIGKKKKC 203
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDL+ +R V+++ A+E + +P I ETSA DSTNVEEAF +A ++K+
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFI----ETSALDSTNVEEAFLTMARQIKD 171
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL+ +R V+++ A+E + +P +ETSA DSTNVE+AF +A ++K S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMP----FLETSALDSTNVEDAFLTMARQIKESMSQ 175
Query: 76 TLCNEP 81
NE
Sbjct: 176 QNLNET 181
>gi|353235983|emb|CCA67987.1| related to small G-protein Ras1 [Piriformospora indica DSM 11827]
Length = 215
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
+ +NKCDLE ER+V NE ++ + HY +ETSAK NV+EAF L E++
Sbjct: 119 IVANKCDLEFERQVGQNEGRDLAK-----HYNCKFIETSAKQRINVDEAFSALVREIRR 172
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 13 DSRVWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
D + NKCD+E R+V E++ EY + +ETSAK + NVEEAF+ LA ++K
Sbjct: 129 DRMIIGNKCDVEERRQVSRERGEQLAIEYGTKF---LETSAKANINVEEAFFTLARDIK 184
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL S+R V +E E+ + I ++ ETSAK++ NVE+AF+ +A E+K R
Sbjct: 121 GNKCDLVSKRVVTSDEGRELAD-SHGIKFI-ETSAKNAYNVEQAFHTMAGEIKKR 173
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL + + V +E + EI METSAK++TNVE+AF +A E+KNR
Sbjct: 120 GNKCDLAANKVV---SSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N P T+ + + K C
Sbjct: 173 MASQPANNAR---PPTVQIRGQPMNQKSGC 199
>gi|308469805|ref|XP_003097139.1| CRE-RAB-39 protein [Caenorhabditis remanei]
gi|308240608|gb|EFO84560.1| CRE-RAB-39 protein [Caenorhabditis remanei]
Length = 229
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
KCD++++R+V++ E GEY + H + +ETS+++ NV EAF+ +A E++NR
Sbjct: 134 GTKCDMDAQRQVNYEE----GEYFAKYHKMKFIETSSRNGDNVNEAFHMIAQEIQNR 186
>gi|148694187|gb|EDL26134.1| RAB8B, member RAS oncogene family, isoform CRA_d [Mus musculus]
Length = 126
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 37 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 91
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 92 LNRKMNDS--NSSGAGGPVKIT 111
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAFY LA ++K +
Sbjct: 118 LLGNKCELIDKRQVTKERGEQLAVEYGIKF---METSAKSSINVEEAFYTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL + R V + A+ + EI +ETSAKD+TNVE+AF + + +KNR ++
Sbjct: 120 GNKSDLTANRVVSYETAKAFAD---EIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQ 176
Query: 77 LCN---EPINTDNTNSPITLSN 95
N +P + P+T S
Sbjct: 177 PANNSAKPPTVNIRGQPVTQSG 198
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDRRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|403276230|ref|XP_003929809.1| PREDICTED: ras-related protein Rab-19 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFVLMAKELIARNSLHH 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L S + C C
Sbjct: 188 YGESALNSLPLDSSPVLMAQGPSEKTHCTC 217
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 9 DSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
DS + NKCDLE+ REV E + + E E + METSA D+TNV+ AF + E
Sbjct: 115 DSTVARMLVGNKCDLENIREVSTEEGKSLAE--EEGLFFMETSALDATNVQTAFEIVIRE 172
Query: 69 LKNRQSATLCN 79
+ N S + N
Sbjct: 173 IYNNISRKVLN 183
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA R
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLA-----R 167
Query: 73 QSATLCNEPINTDNT---NSPITLS 94
T N +N N+ P+ ++
Sbjct: 168 DIMTKLNRKMNDSNSAGAGGPVKIT 192
>gi|7638417|gb|AAF65465.1|AF250024_1 Ras1p [Suillus bovinus]
Length = 216
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 173
Query: 73 QSATLCNEPINTDNTNS 89
P+ ++
Sbjct: 174 NKEQQTGRPVMANSGGG 190
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA R
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLA-----R 167
Query: 73 QSATLCNEPINTDNT---NSPITLS 94
T N +N N+ P+ ++
Sbjct: 168 DIMTKLNRKMNDSNSAGAGGPVKIT 192
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A++ + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTSKKVVEYSVAKDFADQLSIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
T +T +P
Sbjct: 177 TSTASGPGKTSTVTP 191
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL + + V + A+ + EI METSAK +TNVE+AF +A E+KNR
Sbjct: 120 GNKSDLTANKVVSYETAKAFAD---EIGIPFMETSAKSATNVEQAFMAMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ +P+N P T+ + + K C
Sbjct: 173 MATQPMNNAR---PPTVQIRGQPVNQKSGC 199
>gi|409078311|gb|EKM78674.1| hypothetical protein AGABI1DRAFT_121109, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 231
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 13/68 (19%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELK-- 70
V +NKCDLE ER+V NE ++ H+ +ETSAK NV+EAF L E++
Sbjct: 127 VVANKCDLEYERQVGMNEGRDLAR-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 181
Query: 71 ---NRQSA 75
N+Q+A
Sbjct: 182 NRTNKQAA 189
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLES+R+V +A+E E E + +ETSA ++TNVE AF + E+ N
Sbjct: 130 GNKCDLESQRDVPTEDAKEFAE--KEGLFFLETSALEATNVETAFITVLTEIYN 181
>gi|326428241|gb|EGD73811.1| ras protein [Salpingoeca sp. ATCC 50818]
Length = 188
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKN 71
+ NKCDLE REV + E G+ V + + + METSAK NVEEAFY L E++
Sbjct: 113 LVGNKCDLEEHREV----STEAGQAVAKSYSIPFMETSAKKRINVEEAFYQLVREIRK 166
>gi|302684055|ref|XP_003031708.1| hypothetical protein SCHCODRAFT_67931 [Schizophyllum commune H4-8]
gi|300105401|gb|EFI96805.1| hypothetical protein SCHCODRAFT_67931 [Schizophyllum commune H4-8]
Length = 212
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V NE ++ ++ + +ETSAK NV++AF L E++
Sbjct: 120 VVANKCDLEYERQVGMNEGRDLAKHFGCVF--IETSAKQRINVDQAFTSLVREIRK 173
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+E REV + E++ EY + +ETSAK + N++EAF+ LA ++K++
Sbjct: 117 IIGNKCDIEERREVSRDRGEQLAIEYGTKF---LETSAKANLNIDEAFFTLARDIKSK 171
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+E REV + E++ EY + +ETSAK + N++EAF+ LA ++K++
Sbjct: 118 IIGNKCDIEERREVSRDRGEQLAIEYGTKF---LETSAKANLNIDEAFFTLARDIKSK 172
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V + A+ + + I + METSAK++ NVE+AF +A +K+R +
Sbjct: 120 GNKCDLADKRAVSYETAKAFADEIG-IPF-METSAKNALNVEQAFMAMAASIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K +C
Sbjct: 174 ASQP--AANNARPATVQIRGQPVDQKTSC 200
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL +++ VD+ A+E + + I + +ETSAK++ NVE+AF +A E+K R
Sbjct: 121 LVGNKCDLHTKKVVDYTTAKEYADQL-GIPF-LETSAKNAMNVEQAFMTMAAEIKLRVGP 178
Query: 76 TLCNEPINTDNTNSPITLSNDTKS 99
++D+ +SP + D+ S
Sbjct: 179 PSSGNNESSDDEDSPPRGTRDSGS 202
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR---QS 74
NK DL +++ VD A+ + + I + +ETSAK++TNVE+AF +A E+KNR Q
Sbjct: 120 GNKADLTAKKVVDTQTAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNRMASQP 177
Query: 75 ATLCNEPINTD-NTNSPI 91
A N+P N N P+
Sbjct: 178 AMNSNKPNNVSLNKGQPL 195
>gi|336370733|gb|EGN99073.1| hypothetical protein SERLA73DRAFT_181871 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383499|gb|EGO24648.1| hypothetical protein SERLADRAFT_468266 [Serpula lacrymans var.
lacrymans S7.9]
Length = 216
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDVAK-----HFGCKFIETSAKQRINVDEAFTNLVREIRKY 173
Query: 73 QSATLCNEPINTD-NTNSPITLSN 95
P+ + + P N
Sbjct: 174 NKEQQTGRPVMANSGSGGPGVYGN 197
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTGKKVVEYSVAKEFADQLNIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
T +T +P
Sbjct: 177 TSTPSGAAKSSTVTP 191
>gi|323352560|gb|EGA85059.1| Ras2p [Saccharomyces cerevisiae VL3]
Length = 222
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
V NK DLE+E++V + + M + + P +ETSAK + NVEEAFY LA + R
Sbjct: 20 VVGNKSDLENEKQVSYQDGLNMAKQMNAP----FLETSAKQAINVEEAFYTLARLV--RD 73
Query: 74 SATLCNEPINTDNTNSPITLSNDTKS 99
N+ + T+N NS T S DTK
Sbjct: 74 EGGKYNKTL-TENDNSKQT-SQDTKG 97
>gi|338724303|ref|XP_001498622.3| PREDICTED: ras-related protein Rab-19-like [Equus caballus]
Length = 217
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKCDLWENRHVLFEDACTLAEKYGLLA-VLETSAKESRNIDEVFVLMARELIARNSLQL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N +S L + + C C
Sbjct: 188 YGETALNNLPLDSSPVLVAQGPTEKTHCTC 217
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++ VD+ A+ + + I + +ETSAK++TNVE+AF +A E+KNR ++
Sbjct: 120 GNKSDLTGKKVVDYQAAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKNRMAS 175
>gi|410902081|ref|XP_003964523.1| PREDICTED: ras-related protein Rab-37-like [Takifugu rubripes]
Length = 229
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ +ER V E E++ EY VP METSAK NVE AF +A ELK+R
Sbjct: 146 LLGNKSDMAAERAVKTEEGEKLAKEYGVP----FMETSAKTGVNVELAFLAIAKELKHRT 201
Query: 74 SATLCNEP 81
+ NEP
Sbjct: 202 TQQ-PNEP 208
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 18/100 (18%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVP----------EIHY-VMETSAKDSTNVEEAFYCLA 66
NKCDL + + V A+ + +V EI METSAK++TNVE+AF +A
Sbjct: 120 GNKCDLTANKVVSSETAKVILNFVVLFLLTSAFADEIGIPFMETSAKNATNVEQAFMAMA 179
Query: 67 NELKNRQSATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
E+KNR + ++P+N P T+ + + K C
Sbjct: 180 AEIKNR----MASQPVNNAR---PPTVQIRGQPVNQKAGC 212
>gi|345560363|gb|EGX43488.1| hypothetical protein AOL_s00215g224 [Arthrobotrys oligospora ATCC
24927]
Length = 109
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+ ++ VD+ A+E + + I + +ETSAK++TNVE+AF +A ++K R SAT
Sbjct: 28 GNKSDMSDKKVVDYTVAKEFADSLG-IPF-LETSAKNATNVEQAFLTMARQIKERMGSAT 85
Query: 77 LCNEPINTDNTNSPI 91
N+ + N P+
Sbjct: 86 QNNKATVSVNPGQPV 100
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R V +E + + E E + METSA DSTNV+ AF + E+ N S +
Sbjct: 125 GNKCDLENIRAVSIDEGKSLAE--AEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKV 182
Query: 78 CN 79
N
Sbjct: 183 LN 184
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 18 SNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--- 73
NKCD+ ++ VD + + + EY I + +ETSAK+S NVEEAF LA ++K R
Sbjct: 127 GNKCDMTEKKVVDSSRGKSLADEY--GIKF-LETSAKNSVNVEEAFIGLAKDIKKRMIDT 183
Query: 74 ----SATLCNEPINTDNT 87
T+C P N NT
Sbjct: 184 PNDPDHTICITPNNKKNT 201
>gi|66800825|ref|XP_629338.1| Ras GTPase [Dictyostelium discoideum AX4]
gi|730475|sp|P03967.2|RASD_DICDI RecName: Full=Ras-like protein rasD; AltName: Full=Transforming
protein p23 homolog; Flags: Precursor
gi|7347|emb|CAA77848.1| ras protein [Dictyostelium discoideum]
gi|60462648|gb|EAL60850.1| Ras GTPase [Dictyostelium discoideum AX4]
Length = 187
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NK DL+ ER+V NE +E+ + P ME+SAK NVEEAFY L E++
Sbjct: 113 LVGNKADLDHERQVSVNEGQELAKGFNCP----FMESSAKSRINVEEAFYSLVREIRK 166
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL + R V + A+ + V I + METSAKD+TNVE+AF + ++KNR +
Sbjct: 120 GNKCDLPN-RAVSYESAKAFADEVG-IPF-METSAKDATNVEQAFMAMTADIKNR----M 172
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 173 ASQPANNAR---PPTVQLQGQPVNQKGGC 198
>gi|464550|sp|Q05058.1|RASL_COPCI RecName: Full=24 kDa Ras-like protein; Flags: Precursor
gi|325511383|sp|A8NU18.3|RASL_COPC7 RecName: Full=24 kDa Ras-like protein; Flags: Precursor
gi|217884|dbj|BAA02552.1| Cc.RAS [Coprinopsis cinerea]
Length = 215
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 10/66 (15%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELK-- 70
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 174
Query: 71 NRQSAT 76
NR+ T
Sbjct: 175 NREQQT 180
>gi|341902814|gb|EGT58749.1| hypothetical protein CAEBREN_05163 [Caenorhabditis brenneri]
Length = 229
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
KCD++++R+V++ E GEY + H + +ETS++ NV EAF+ +A E++NR
Sbjct: 134 GTKCDMDAQRQVNYEE----GEYFAKYHKMKFIETSSRSGDNVNEAFHMIAQEIQNR 186
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLA-----NELKNR 72
NK DL S+R VDF EA+ + METSAK + NV E F +A NE +N
Sbjct: 133 GNKADLSSKRAVDFQEAQAYAD--DNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNA 190
Query: 73 QSATLCNEPINTDNTNSP 90
QS T N ++ N P
Sbjct: 191 QSTTGRNRGVDLQENNPP 208
>gi|297681687|ref|XP_002818580.1| PREDICTED: ras-related protein Rab-19, partial [Pongo abelii]
Length = 105
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 17 GNKCDLWEKRHVLFEDACTLAEKY-GLLAVLETSAKESKNIDEVFVLMAKELIARNSLHL 75
Query: 78 CNEPI-NTDNTNSPITLSNDTKSIRNKCNC 106
E N +S L S + C C
Sbjct: 76 YGESASNGLPLDSSPVLMAQGPSEKTHCTC 105
>gi|395533067|ref|XP_003768585.1| PREDICTED: ras-related protein Rab-37 [Sarcophilus harrisii]
Length = 224
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ ER V + E + EY VP METSAK NVE AF +A ELK+R
Sbjct: 140 LLGNKADVSRERVVRSEDGETLAREYGVP----FMETSAKTGMNVELAFLAIARELKHRA 195
Query: 74 SATLCNEP 81
NEP
Sbjct: 196 GQQPGNEP 203
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V+++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTSKKVVEYSVAKEFADQLNIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
+ +T +P
Sbjct: 177 SSTPSGAAKSSTVTP 191
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ VD A+E + + I + +ETSAK S NVE+AF +A E+K R +
Sbjct: 120 GNKNDLTTKKVVDTATAKEFADSLG-IKF-LETSAKTSENVEQAFITMAQEIKER----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P T T+S I + + + ++ +C
Sbjct: 174 ASQP-QTQKTSSGIHVGANAQEVKESSSC 201
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT- 76
NK DLESER V EA++ E + +ETSA DSTNVE AF + E+ + S+
Sbjct: 122 GNKSDLESERSVPTEEAKDFAE--KKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKE 179
Query: 77 LCNEPINTDNTNSP 90
+ P++ NSP
Sbjct: 180 VVRGPMSAVTLNSP 193
>gi|426199302|gb|EKV49227.1| hypothetical protein AGABI2DRAFT_149467 [Agaricus bisporus var.
bisporus H97]
Length = 221
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ H+ +ETSAK NV+EAF L E++
Sbjct: 127 VVANKCDLEYERQVGMNEGRDLAR-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 181
Query: 73 QSATLCNEPIN 83
P++
Sbjct: 182 NKDQQTGRPLH 192
>gi|402218850|gb|EJT98925.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD + +R V + +E+ + + + + +ETSAK + NVEEAF+ LA ++K R TL
Sbjct: 121 GNKCDWDDKRAVSTQQGQELADELG-VRF-LETSAKQNINVEEAFFSLARDIKARLLDTL 178
>gi|345319076|ref|XP_001520827.2| PREDICTED: ras-related protein Rab-8A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AFY LA ++K +
Sbjct: 123 ILGNKCDVNEKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKM 178
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT KS +C
Sbjct: 179 DKKLEGNSPQGSNHGVRITTDQQKKSSFFRC 209
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL R V ++ A+ + + I + ME SAK +TNVE+AF +A E+KNR +
Sbjct: 120 GNKSDLNDNRAVSYDTAKAFADEIG-IPF-MEASAKSATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P N P T+ + + K C
Sbjct: 174 ATQP--ASNNAKPPTVQIRGQPVNQKSGC 200
>gi|47219617|emb|CAG02662.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ +ER V E E + EY VP METSAK NVE AF +A ELK+R
Sbjct: 110 LLGNKADMAAERAVKKEEGERLAKEYGVP----FMETSAKSGVNVELAFLAVAKELKHRT 165
Query: 74 SATLCNEP 81
+ NEP
Sbjct: 166 TQQ-PNEP 172
>gi|392564570|gb|EIW57748.1| ras protein [Trametes versicolor FP-101664 SS1]
Length = 216
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V NE ++ + H+ +ETSAK+ NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKNRINVDEAFSQLVREIRK 172
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F A E+K R
Sbjct: 145 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFXTXAAEIKKR 197
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 7/66 (10%)
Query: 19 NKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SA 75
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +A
Sbjct: 1022 NKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGTA 1077
Query: 76 TLCNEP 81
T+ N+P
Sbjct: 1078 TVNNKP 1083
>gi|440901603|gb|ELR52512.1| Ras-related protein Rab-31, partial [Bos grunniens mutus]
Length = 197
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ RQ
Sbjct: 118 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGIS-----RQIP 170
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L +P N+ S I L T + +C
Sbjct: 171 PL--DPHENGNSGS-IKLGKPTSQVSRRC 196
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +E+ VD N+A+ E + I ++ ETSAK++TNVEE F +A ++KNR A +
Sbjct: 120 GNKTDLVNEKVVDTNQAKSFAESMG-IPFI-ETSAKNATNVEECFCSMARDIKNRL-ADI 176
Query: 78 CNEPINTDNTNSPITLSN 95
P N D+TN +T+SN
Sbjct: 177 QETPKN-DSTN--VTVSN 191
>gi|62084144|dbj|BAD91453.1| RAS protein [Trametes hirsuta]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK+ NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKNRINVDEAFSQLVREIRKY 173
Query: 73 QSATLCNEP-INTDNTNSPITLSND 96
P + ++P N+
Sbjct: 174 NKEQQTGRPGVQPSAPSAPGVYGNE 198
>gi|118366113|ref|XP_001016275.1| Ras family protein [Tetrahymena thermophila]
gi|89298042|gb|EAR96030.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777812|dbj|BAJ21302.1| Rab-family small GTPase Rab8F [Tetrahymena thermophila]
Length = 207
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+ESER+V F E + + + I + ETSAK NV EAF+ + E++ + +
Sbjct: 124 GNKCDMESERQVTFEEGKSLADTFG-IKF-FETSAKSDINVTEAFFTICKEIQEK--INI 179
Query: 78 CNEPINTDNTNSPITLSND 96
EP + SP TL +
Sbjct: 180 NPEP----KSESPFTLKQE 194
>gi|117939031|dbj|BAF36669.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939033|dbj|BAF36670.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939035|dbj|BAF36671.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939037|dbj|BAF36672.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 195
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 2 YIFVGWPDSAHDS--RVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVE 59
++F G P + + NK DLE +R V +AE +I Y ETSAKD++NVE
Sbjct: 97 FLFQGSPQDPDNFPFMLLGNKIDLEEQRVVQAKKAENWCHQKGDIKY-FETSAKDNSNVE 155
Query: 60 EAFYCLANELKNRQSATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+AF +A L E D S I ++ DTK ++KC C
Sbjct: 156 QAFLEIAR-------IGLSRESQEDDIPTSSIAIAEDTKP-KSKCPC 194
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 11/69 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NK DL +++ V++ EA +E+G +P +ETSAK++TNVE+AF ++ ++K+R
Sbjct: 121 GNKSDLATKKVVEYAEAKSFADELG--IP----FLETSAKNATNVEQAFLTMSKQIKDRM 174
Query: 74 -SATLCNEP 81
S+T+ + P
Sbjct: 175 GSSTMASGP 183
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 11/69 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NK DL +++ V++ EA +E+G +P +ETSAK++TNVE+AF ++ ++K+R
Sbjct: 121 GNKSDLATKKVVEYAEAKAFADELG--IP----FLETSAKNATNVEQAFLTMSKQIKDRM 174
Query: 74 -SATLCNEP 81
S+T+ + P
Sbjct: 175 GSSTMASGP 183
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLES R V E + + E E + METSA DSTNV+ AF + ++ +
Sbjct: 124 GNKCDLESIRAVSVEEGKALAE--TEGLFFMETSALDSTNVKTAFEMVIRDIYT----NI 177
Query: 78 CNEPINTDNTNSPITLSNDTKSIRN 102
+ +N+D + +++ N +++
Sbjct: 178 SRKQLNSDTYKTELSMKNRVSLVKD 202
>gi|15281841|gb|AAK94457.1| GTP binding protein Rab1a, partial [Muntiacus reevesi]
Length = 84
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
N CDL +++ VD+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 2 GNICDLTTKKVVDYTTAKEFADSL-GIPF-LETSAKNATNVEQSFMTMAAEIKKRMG 56
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++R VD+ A+ + + I + +ETSAK++TNVE+AF +A E+K R ++
Sbjct: 120 GNKSDLTAKRAVDYETAKAFADEIG-IPF-LETSAKNATNVEQAFMTMAAEIKTRMAS 175
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+E REV + E++ EY + +ETSAK + N++EAF+ LA ++K++
Sbjct: 118 IIGNKCDIEERREVSRDRGEQLAIEYGTKF---LETSAKANLNIDEAFFTLARDIKSKM 173
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 7 WPDSAHDSRVWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYC 64
+ S + NKCDL ++ VD+ A+E + +P I ETSA +STNVE+AF
Sbjct: 109 YATSGVQKLLVGNKCDLTDKKVVDYAVAKEFADSRGIPFI----ETSAAESTNVEQAFIL 164
Query: 65 LANELKNRQSATLCNEPINTDNTNSPITLSN 95
++ ++K A + ++P N + LS
Sbjct: 165 MSKQIK----AQMASQPTNNAAGKPSVNLSG 191
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL++ REV E + + E E + METSA DSTNV AF + E+ N ++
Sbjct: 127 GNKCDLDNIREVPVEEGKALAE--SEGLFFMETSALDSTNVNTAFELVIKEIYN----SV 180
Query: 78 CNEPINTDNTNSPITL 93
+ +N+D+ + ++L
Sbjct: 181 SRKILNSDSYKAELSL 196
>gi|323346889|gb|EGA81168.1| Ras2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 119
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
V NK DLE+E++V + + M + + P +ETSAK + NVEEAFY LA + R
Sbjct: 20 VVGNKSDLENEKQVSYQDGLNMAKQMNAP----FLETSAKQAINVEEAFYTLARLV--RD 73
Query: 74 SATLCNEPINTDNTNSPITLSNDTKS 99
N+ + T+N NS T S DTK
Sbjct: 74 EGGKYNKTL-TENDNSKQT-SQDTKG 97
>gi|432862576|ref|XP_004069923.1| PREDICTED: ras-related protein Rab-19-like [Oryzias latipes]
Length = 218
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R+V F +A + E+ + +ETSA ++ NVE AF +A EL R ++
Sbjct: 127 GNKSDLHLQRQVLFEDACTLAEH-NGVLAALETSAMEAQNVEAAFVLMARELMARNGPSV 185
Query: 78 CNEPINTDNTNSPITLSNDTKSI------RNKCNC 106
E + SP L T+ + KC C
Sbjct: 186 AEEA-----SQSPAPLRGSTRPLHASAPTHKKCGC 215
>gi|189206267|ref|XP_001939468.1| ras-like protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330922179|ref|XP_003299731.1| hypothetical protein PTT_10787 [Pyrenophora teres f. teres 0-1]
gi|187975561|gb|EDU42187.1| ras-like protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311326445|gb|EFQ92141.1| hypothetical protein PTT_10787 [Pyrenophora teres f. teres 0-1]
Length = 211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDL+ ER+V E + + +ETSAK NV+ AFY + E++ N++
Sbjct: 118 VVGNKCDLDGERQVSTQEGQTLARNFG--CKFIETSAKSRINVDNAFYDIVREIRRYNKE 175
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++ P + N T D ++ + C C
Sbjct: 176 MSSYTGAPGSNGNGPQKTTFDTDDQAEKKGCCC 208
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATLC 78
NK DL S+R VDF EA+ + METSAK + NV E F +A +L
Sbjct: 413 NKADLASKRAVDFQEAQAYAD--DNSLLFMETSAKTAMNVNEIFMAIAKKLPK------- 463
Query: 79 NEPINTDNT---NSPITLSNDTKSIRNKC 104
NEP N N + L ++ + R++C
Sbjct: 464 NEPQNAPGAPGRNRGVDLQENSPTSRSQC 492
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL +++ VD+ A+ + EI +ETSAK++ NVE+AF +A E+KNR
Sbjct: 120 GNKNDLTAKKVVDYQTAKAFAD---EIGIPFLETSAKNAINVEDAFMTMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N+ P T+ + + K C
Sbjct: 173 MASQP--AMNSTRPTTVQMKGQPVVPKSGC 200
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ VDF A E E +P ++ETSAK++ NVE+AF +A+E++ R A
Sbjct: 120 GNKSDLSSKKVVDFTTAMEFTESLKIP----LLETSAKNANNVEKAFLAMASEIQKRIGA 175
>gi|443896776|dbj|GAC74119.1| GTPase Rab1/YPT1, partial [Pseudozyma antarctica T-34]
Length = 175
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS-AT 76
NK DL +++ V++ A+E + + +I + +ETSAK +TNVE+AF +A ++K+R +T
Sbjct: 90 GNKSDLTNKKVVEYATAKEFADQL-QIPF-LETSAKSATNVEQAFLTMAKQIKDRMGNST 147
Query: 77 LCNEP 81
+ N+P
Sbjct: 148 VNNQP 152
>gi|344293487|ref|XP_003418454.1| PREDICTED: ras-related protein Rab-8B-like [Loxodonta africana]
Length = 183
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++
Sbjct: 94 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDI--- 145
Query: 73 QSATLCNEPINTDN---TNSPITLS 94
T N +N N P+ ++
Sbjct: 146 --MTKLNRKMNDSNLSGAGGPVKIT 168
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ V++ A+E + + +I + +ETSAK +TNVE+AF +A ++K+R ++
Sbjct: 123 GNKSDLTNKKVVEYATAKEFADQL-QIPF-LETSAKSATNVEQAFLTMAKQIKDRMGSST 180
Query: 78 CNEPINTDNT 87
N +T
Sbjct: 181 VNNQAGGKST 190
>gi|397511745|ref|XP_003826227.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pan paniscus]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L +
Sbjct: 118 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-- 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
N N+ + L+ T+ RN+C
Sbjct: 174 -NPGANSARGRGGVDLTEPTQPTRNQC 199
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ V++ A+E + + +I + +ETSAK +TNVE+AF +A ++K+R ++
Sbjct: 123 GNKSDLTNKKVVEYATAKEFADQL-QIPF-LETSAKSATNVEQAFLTMAKQIKDRMGSST 180
Query: 78 CNEPINTDNT 87
N +T
Sbjct: 181 VNNQAGGKST 190
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 10/63 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NK DL +++ V+ NEA +E+G +P +ETSAK++TNVE+AF ++ ++K+R
Sbjct: 121 GNKSDLTTKKVVEHNEAKSFADELG--IP----FLETSAKNATNVEQAFLTMSKQIKDRM 174
Query: 74 SAT 76
+T
Sbjct: 175 GST 177
>gi|351701508|gb|EHB04427.1| Ras-related protein Rab-19 [Heterocephalus glaber]
Length = 256
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V F +A + E + V+ETSAK+S N++EAF +A EL R S L
Sbjct: 168 GNKSDLWQKRHVLFEDACTLAEKYGLLA-VLETSAKESRNIDEAFMLMAKELMARNSLQL 226
Query: 78 CNEPINTDNT--NSPITLSNDTKSIRNKCNC 106
E +SP+ L+ + C C
Sbjct: 227 YGEGATHSLAPESSPVLLAQ-APGKKPGCTC 256
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ REV E++ + E E + +ETSA ++TNV +AF + E+ N S
Sbjct: 122 GNKCDLETLREVPIEESKALAE--AEKLFFIETSALNATNVNDAFQIVIKEVYNNMS--- 176
Query: 78 CNEPINTDNTNSPITLSNDTK 98
+ +N+D+ S + + TK
Sbjct: 177 -RKALNSDSYKSKLLSNRSTK 196
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD++ R V + E++ EY + METSAK S NVEEAF LA ++K++
Sbjct: 118 ILGNKCDMDDRRAVSKEKGEQLAIEYGIKF---METSAKASINVEEAFVTLARDIKSK 172
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD+ A+E Y ++H +ETSAK +TNVE+AF +A +K R
Sbjct: 120 GNKSDLTTKKVVDYQTAKE---YASQLHIPFLETSAKSATNVEQAFMTMAAHIKLR 172
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L +
Sbjct: 132 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-- 187
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
N N+ + L+ T+ RN+C
Sbjct: 188 -NPGANSARGRGGVDLTEPTQPTRNQC 213
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++ V++ A+E + + I + +ETSAK++TNVE+AF +A ++K+R ++
Sbjct: 120 GNKSDLTGKKVVEYTVAKEFADQLA-IPF-LETSAKNATNVEQAFLTMAKQIKDRMGSSS 177
Query: 78 CNEPINTDNTNSP 90
+T +P
Sbjct: 178 AAPGAGKSSTITP 190
>gi|170099315|ref|XP_001880876.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644401|gb|EDR08651.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ +NKCDLE ER+V +E ++ + H+ +ETSAK NV+EAF L +++
Sbjct: 120 IVANKCDLEYERQVGMDEGRDLAK-----HFGCKFIETSAKQRINVDEAFNHLVRDIRKY 174
Query: 73 QSATLCNEPINTDNTNSP 90
+ + N P
Sbjct: 175 KKEQQTGRSVVAGNGRGP 192
>gi|380480031|emb|CCF42665.1| Ras-like protein [Colletotrichum higginsianum]
Length = 214
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLESEREV E E + + +ETSAK NV++AFY + E++ NR+
Sbjct: 118 VVGNKCDLESEREVTRQEGEALAKSFG--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 175
Query: 74 SATLCNEPINTDNTNSP 90
N P
Sbjct: 176 MQGYSTGSGGASGINGP 192
>gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 172
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ + K R+
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISEQRKARR 171
>gi|4150910|emb|CAA77070.1| ras protein [Suberites domuncula]
Length = 191
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ +NK DLE+ER V +E EE+ + + +I YV ETSAK +VE+AF+ L ++ Q
Sbjct: 119 LVANKADLEAERVVTLSEGEELAQQL-KIKYV-ETSAKHRVHVEKAFHDLVRVIRRAQ-- 174
Query: 76 TLCNEPINTD 85
+P NTD
Sbjct: 175 ----KPDNTD 180
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S + V + +A+ + + I + METSAKD+TNVE+AF ++ +K+R +
Sbjct: 120 GNKSDLTSNKVVSYEQAKAFADEIG-IPF-METSAKDATNVEQAFMAMSAAIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--AMNNAKPSTVQFKGQPVEQKGGC 200
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++ NVE+AF +A E+K R
Sbjct: 125 GNKCDLHTKKVVDYTTAKEYADQLGIP----FLETSAKNAMNVEQAFMTMAAEIKLR 177
>gi|167377340|ref|XP_001734362.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904153|gb|EDR29479.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 205
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDLESER+V NEA+ + E + + ETSAK N+ E F L ++K
Sbjct: 120 GNKCDLESERQVQANEAKNLAEQWKVLFF--ETSAKAKINITETFQALVKDIK 170
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDL +R V+++ A+E + +P +ETSA DSTNVEEAF +A ++K
Sbjct: 120 GNKCDLNDKRVVEYDVAKEFADANNMP----FLETSALDSTNVEEAFLTMARQIK 170
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +E+ VD N+A+ E + I ++ ETSAK++TNVEE F +A ++KNR
Sbjct: 122 GNKTDLVNEKVVDSNQAKSFAESMG-IPFI-ETSAKNATNVEECFISMARDIKNR 174
>gi|331223841|ref|XP_003324593.1| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309303583|gb|EFP80174.1| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 175
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++ V++ A++ + + I + +ETSAK +TNVE+AF +A ++K+R +T
Sbjct: 91 GNKSDLTQKKVVEYTVAKDFADQLT-IPF-LETSAKSATNVEQAFLTMAKQIKDRTGSTT 148
Query: 78 CNEPIN 83
N N
Sbjct: 149 VNTGSN 154
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT +S +C
Sbjct: 174 DKKLAGNSPQGSNQGVKITPDQQKRSSFFRC 204
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++ NVE+AF +A E+K R
Sbjct: 123 GNKCDLHTKKVVDYTTAKEYADQLGIP----FLETSAKNAMNVEQAFMTMAAEIKLR 175
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLES R V E + + E E + METSA DSTNV+ AF + ++ +
Sbjct: 124 GNKCDLESIRAVSVEEGKALAE--TEGLFFMETSALDSTNVKTAFEMVIRDIYT----NI 177
Query: 78 CNEPINTDNTNSPITLSNDTKSIRN 102
+ +N+D + +++ N +++
Sbjct: 178 SRKQLNSDTYKTELSMKNRVSLVKD 202
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 20 KCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
KCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K R
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIKKRMG 174
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
V NKCD+ +R+V + E++ EY + METSAK + NVE AF+ LA ++K +
Sbjct: 116 VLGNKCDVNEKRQVSKEKGEKLALEYGIKF---METSAKANINVENAFFTLARDIKAKMD 172
Query: 75 ATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
+ N IT KS +C
Sbjct: 173 KRMEGNSPQGSNQGVKITQDQQKKSSFFRC 202
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++ V++ A++ + +P +ETSAK +TNVE+AF +A ++K+R +
Sbjct: 156 GNKSDLTQKKVVEYTVAKDFADQLTIP----FLETSAKSATNVEQAFLTMAKQIKDRTGS 211
Query: 76 TLCNEPIN 83
T N N
Sbjct: 212 TTVNTGSN 219
>gi|66730270|ref|NP_001019497.1| ras-related protein Rab-19 [Rattus norvegicus]
gi|81889125|sp|Q5M7U5.1|RAB19_RAT RecName: Full=Ras-related protein Rab-19
gi|56789734|gb|AAH88443.1| RAB19, member RAS oncogene family [Rattus norvegicus]
gi|149065308|gb|EDM15384.1| similar to RAB19, member RAS oncogene family [Rattus norvegicus]
Length = 217
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKSDLWEKRHVLFEDACTLAEKYGLL-AVLETSAKESRNIDEVFVLMAKELIARNSLHL 187
Query: 78 CNEPINTD--NTNSPITLSNDTKSIRNKCNC 106
E +SP+ +++ S R C C
Sbjct: 188 YGESAQQGLPQDSSPVLVAH-VPSERTHCTC 217
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDL +++ VD+ A+E + +P +E SAK++TNVE+AF +A E+KN
Sbjct: 120 GNKCDLTTKKVVDYTTAKEYADQSSMP----FLEASAKNATNVEQAFMTMAAEIKN 171
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDSTNVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELG--IP----FLETSAKDSTNVEQAFLTMAAEIKKKW 173
Query: 74 SAT 76
A+
Sbjct: 174 GAS 176
>gi|402697437|gb|AFQ90905.1| RAS oncogene family protein, partial [Malaclemys terrapin]
Length = 133
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDL +++ VD+ A+E + +P +ETSAK++TNVE++F +A E+K
Sbjct: 83 GNKCDLTTKKVVDYTTAKEFADSLGIP----FLETSAKNATNVEQSFMTMAAEIK 133
>gi|402224516|gb|EJU04578.1| ras-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ +NKCDLE ER+V +E ++ + HY +ETSAK NV++AF L E++
Sbjct: 125 IVANKCDLEYERQVGAHEGRQLAQ-----HYGCKFIETSAKQRLNVDDAFATLVREIRRY 179
Query: 73 QSA 75
SA
Sbjct: 180 NSA 182
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 8 PDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN 67
D+ + NKCDLES R V E + + E E + METSA DSTNV+ AF +
Sbjct: 113 SDTTVAKMLIGNKCDLESIRAVSVEEGKSLAE--SEGLFFMETSALDSTNVKTAFEMVIR 170
Query: 68 ELKNRQSATLCNEPINTDNTNSPITL 93
E+ + + + +N+D+ +T+
Sbjct: 171 EIY----SNISRKQLNSDSYKEELTV 192
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLES R V E + + E E + METSA DSTNV+ AF + ++ +
Sbjct: 124 GNKCDLESIRAVSVEEGKALAE--TEGLFFMETSALDSTNVKTAFEMVIRDIYT----NV 177
Query: 78 CNEPINTDNTNSPITLSNDTKSIRN 102
+ +N+D + +++ N +++
Sbjct: 178 SRKQLNSDTYKTELSMKNRVSLVKD 202
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++ NVE+AF +A E+K R
Sbjct: 123 GNKCDLHTKKVVDYTTAKEYADQLGIP----FLETSAKNAMNVEQAFMTMAAEIKLR 175
>gi|315049239|ref|XP_003173994.1| GTP-binding protein ypt1 [Arthroderma gypseum CBS 118893]
gi|311341961|gb|EFR01164.1| GTP-binding protein ypt1 [Arthroderma gypseum CBS 118893]
Length = 173
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+E ++ V++ A+E + + I + +ETSAK+++NVE+AF +A ++K R +AT
Sbjct: 92 GNKSDMEDKKVVEYTVAKEFADSLG-IPF-LETSAKNASNVEQAFLTMARQIKERMGTAT 149
Query: 77 LCNEP 81
+ N+P
Sbjct: 150 VNNKP 154
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++ NVE+AF +A E+K R
Sbjct: 125 GNKCDLHTKKVVDYTTAKEYADQLGIP----FLETSAKNAMNVEQAFMTMAAEIKLR 177
>gi|62955399|ref|NP_001017715.1| ras-related protein Rab-26 [Danio rerio]
gi|62203439|gb|AAH93248.1| Zgc:112183 [Danio rerio]
Length = 230
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NK D+ +ER + E E++ EY VP METSAK NVE AF+ +A ELK+R
Sbjct: 146 LLGNKSDMAAERVITHEEGEKLAKEYGVP----FMETSAKTGVNVELAFHAIARELKHR 200
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 10/63 (15%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDSTNVE+AF +A E+K +
Sbjct: 124 GNKCDLVENKVVDTQTAKAFADELG--IP----FLETSAKDSTNVEQAFLTMAAEIKKKW 177
Query: 74 SAT 76
A+
Sbjct: 178 GAS 180
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 151 GNKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 206
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 207 ATVNNKP 213
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NKCDL REV +E EE+ + + ETSA D +NVEEAF L ++ + S
Sbjct: 120 VIGNKCDLNQTREVQTSEGEELAK--KNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNK 103
++ E +++N P T D S NK
Sbjct: 178 SVDGEQ-SSNNEIKPATEPIDLGSQNNK 204
>gi|116004109|ref|NP_001070412.1| ras-related protein Rab-31 [Bos taurus]
gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus]
Length = 195
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ RQ
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGIS-----RQIP 168
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L +P N+ S I L T + +C
Sbjct: 169 PL--DPHENGNSGS-IKLGKPTSQVGRRC 194
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + VD EA+ E + I + +ETSAK+S NVEEAF +++++K R +
Sbjct: 119 GNKCDLVDSKVVDTEEAKAFAESLG-ISF-LETSAKESINVEEAFLTMSSDIKKRMA 173
>gi|170099345|ref|XP_001880891.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644416|gb|EDR08666.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 214
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSNLVREIRKY 174
Query: 73 QSATLCNEPINTDNTNS 89
P N +
Sbjct: 175 NKEQQTGRPAIAGNGSG 191
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD E +R+V + + + + E + I + +E SAK + NV+EAF+ LA E+K
Sbjct: 121 GNKCDCEEQRQVTYEQGQALAEELG-IKF-LEASAKTNVNVDEAFFTLAREIK------- 171
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ I+ + +S + D S RN C
Sbjct: 172 -KQKIDAEQESSAQASNIDLSSSRNSKRC 199
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S+R VDF EA+ E METSAK + NV E F +A +L
Sbjct: 133 GNKADLGSKRAVDFQEAQAYAE--DNSLLFMETSAKTAMNVNEIFMAIAKKLPK------ 184
Query: 78 CNEPINTDNT---NSPITLSNDTKSIRNKC 104
NEP N N + L ++ + R++C
Sbjct: 185 -NEPQNAPGAPGRNRGVDLQENSPTSRSQC 213
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 8 PDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN 67
D+ + NKCDLES R V E + + E E + METSA DSTNV+ AF +
Sbjct: 114 SDTTVAKMLIGNKCDLESIRAVSVEEGKSLAE--SEGLFFMETSALDSTNVKTAFEMVIR 171
Query: 68 ELKNRQSATLCNEPINTDNTNSPITL 93
E+ + + + +N+D+ +T+
Sbjct: 172 EIY----SNISRKQLNSDSYKEELTV 193
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL-KNRQSAT 76
NK D ++R V +A+E + + +ETSAK + NVEEAF +A EL K R++
Sbjct: 127 GNKSDRTADRAVTTEQAKEFADDLGVAF--LETSAKTAKNVEEAFLTMAGELIKQREAKI 184
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKC 104
N ++ ++L+++ K+ C
Sbjct: 185 AANGGDGKSDSQGKVSLTSEKKAALGGC 212
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL++ R+V E + + E E + METSA DSTNV+ AF + E+ N S +
Sbjct: 127 GNKCDLDNIRDVSIEEGKSLAE--SEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKV 184
Query: 78 CN 79
N
Sbjct: 185 LN 186
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 140 GNKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 195
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 196 ATVNNKP 202
>gi|354508417|ref|XP_003516249.1| PREDICTED: GTPase KRas-like [Cricetulus griseus]
Length = 118
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEM-GEY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDL S R VD N+A+++ G Y +P I ETSAK VE+AFY L E++ +
Sbjct: 42 LVGNKCDLPS-RTVDTNQAQDLAGSYGIPFI----ETSAKTRQRVEDAFYTLVREIRQYR 96
Query: 74 SATLCNE 80
S + E
Sbjct: 97 SKKISKE 103
>gi|328868471|gb|EGG16849.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 207
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL ++ V+ N A+E + +P +ETSAK S NVE+AF +A+E+K Q
Sbjct: 120 GNKCDLIEKKVVETNVAKEYADSACIP----FLETSAKSSANVEQAFMIMASEIKKLQGG 175
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCN 105
N +N + + +CN
Sbjct: 176 ITTGGNANYNNNVVKPSTGTPVGKKKGRCN 205
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLES+R V +A+E + E + +ETSA +STNVE AF + E+ N
Sbjct: 129 GNKCDLESQRVVPTEDAKEFAQ--KEGLFFLETSALESTNVETAFLTVLTEIFN 180
>gi|294658436|ref|XP_460771.2| DEHA2F09438p [Debaryomyces hansenii CBS767]
gi|202953129|emb|CAG89112.2| DEHA2F09438p [Debaryomyces hansenii CBS767]
Length = 255
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
V NKCDLE ER+V + E + + P +ETSAK NVEEAFY L +++ +
Sbjct: 114 VVGNKCDLEIERQVSYEEGLSLAKSFNCP----FLETSAKQRINVEEAFYGLVRSIRDGE 169
Query: 74 SATLCNEPINTD 85
+ E N D
Sbjct: 170 NGAKKLETGNND 181
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 175
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 176 ATVNNKP 182
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD+ A+E + +P +ETSAK+++NVE+AF +A E+KNR
Sbjct: 120 GNKSDLTTKKVVDYTTAKEYADQLGIP----FLETSAKNASNVEQAFMTMAAEIKNR 172
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLE REV E E+M + + + ETSA D NVE AF + ++ + Q+
Sbjct: 119 IVGNKCDLEQMREVSIKEGEDMAKKIG--AFFFETSAFDGKNVETAFMAIIQKICDEQTR 176
Query: 76 TLCNE 80
+E
Sbjct: 177 LRASE 181
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEP 81
L P
Sbjct: 174 DKKLATAP 181
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 124 GNKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 179
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 180 ATVNNKP 186
>gi|148694185|gb|EDL26132.1| RAB8B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 136
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 8/57 (14%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANEL 69
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF+ LA ++
Sbjct: 77 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFFTLARDI 128
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
V NKCD+ +R+V ++EMGE + + + METSAK + NVE AF LA ++K++
Sbjct: 118 VLGNKCDINDKRQV----SKEMGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKSKM 173
Query: 74 SATL 77
L
Sbjct: 174 DTKL 177
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCDL+ +R V+++ A+E + +P +ETSA DSTNVE+AF +A ++K
Sbjct: 133 GNKCDLKDKRVVEYDVAKEFADANKMP----FLETSALDSTNVEDAFLTMARQIK 183
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLE++R+V +A+E E E + +ETSA ++TNVE AF + E+ N
Sbjct: 132 GNKCDLENQRDVPTGDAKEFAE--KEGLFFLETSALEATNVETAFITVLTEIYN 183
>gi|464548|sp|P34726.1|RAS2_PHYPO RecName: Full=Ras-like protein 2; Flags: Precursor
gi|404809|gb|AAC37179.1| membrane protein [Physarum polycephalum]
gi|6114826|gb|AAB58748.3| Ppras2 protein [Physarum polycephalum]
Length = 193
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDL SER+V NE +E+ P +ETSAK NVEE FY L E++
Sbjct: 115 LAGNKCDLASERQVTTNEGQELARAFGCP----FVETSAKARLNVEECFYGLVREIRK 168
>gi|344302481|gb|EGW32755.1| hypothetical protein SPAPADRAFT_54778 [Spathaspora passalidarum
NRRL Y-27907]
Length = 262
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
V NKCDLE ER+V + E M + +ETSAK NVEEAFY L ++++
Sbjct: 114 VVGNKCDLEIERQVSYEEGLAMAKSFG--CQFLETSAKQRINVEEAFYDLVRSIRDQ 168
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 123 GNKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 178
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 179 ATVNNKP 185
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL ++ VD + A E + V I + +ETSAK S NVE+AF +A+E+K Q
Sbjct: 120 GNKCDLIEKKIVDTSTAREYADSVG-IPF-LETSAKSSANVEQAFMIMASEIKKLQGG 175
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + VD EA+ E + I + +ETSAK+S NVEEAF +++++K R +
Sbjct: 120 GNKCDLVDSKVVDTEEAKAFAESLG-ISF-LETSAKESINVEEAFLTMSSDIKKRMA 174
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL +++ V++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTNKKVVEYTVAKEFADQLGIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 T 76
T
Sbjct: 177 T 177
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL+ +R V+++ A+E + +P +ETSA DSTNVE+AF +A ++K S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMP----FLETSALDSTNVEDAFLTMARQIKESMS 174
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL S R+V+FNEA+ E + METSAK + NV + F+ +A EL ++A+
Sbjct: 147 GNKADLASSRKVEFNEAQAYAEENGLLF--METSAKTAMNVNDIFWAIAKELPKTEAAS 203
>gi|393221248|gb|EJD06733.1| ras protein [Fomitiporia mediterranea MF3/22]
Length = 211
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGMNEGRDLAK-----HFNCKFIETSAKQRINVDEAFSNLVREIRR 173
>gi|290981140|ref|XP_002673289.1| ras family small GTPase [Naegleria gruberi]
gi|284086871|gb|EFC40545.1| ras family small GTPase [Naegleria gruberi]
Length = 195
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDLESER + +E ++ + +P +ETSAK NV+EAF L E++ +
Sbjct: 120 LVGNKCDLESERVISADEGKQFAKQLSIPS----LETSAKQRLNVDEAFMALVREVRKSK 175
Query: 74 SATLCNEPINTDNTNS 89
+T P+ D +
Sbjct: 176 PST----PVGKDTKSG 187
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+E +R V ++E GE + H + METSAK + N+E AFY LA + +
Sbjct: 119 ILGNKCDVEDKRAV----SKEKGEMIAREHGIRFMETSAKANINIESAFYELAQAILTKT 174
Query: 74 SATLCNEPIN 83
EP++
Sbjct: 175 CGREQAEPLD 184
>gi|47219616|emb|CAG02661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 139
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ +ER V E E + EY VP METSAK NVE AF +A ELK+R
Sbjct: 59 LLGNKADMAAERAVKKEEGERLAKEYGVP----FMETSAKSGVNVELAFLAVAKELKHRT 114
Query: 74 SATLCNEP 81
+ NEP
Sbjct: 115 TQQ-PNEP 121
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL-KNRQSAT 76
NKCDL R+V+ + +++ E E +ETSA DSTNVEEAF L E+ + +
Sbjct: 125 GNKCDLRHLRQVEIEQGKKLAE--EEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKA 182
Query: 77 LCNE-----PINTDNT 87
L NE + DNT
Sbjct: 183 LVNESTQSFALKQDNT 198
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCDL ++ VD + + + EY + +ETSAK+S NVEEAF LA ++K R
Sbjct: 128 LIGNKCDLPEKKVVDSSRGKALADEYGIKF---LETSAKNSINVEEAFISLAKDIKKRMI 184
Query: 75 ATLCNEPIN 83
T NEP N
Sbjct: 185 DT-PNEPNN 192
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ +R+V + E++ EY + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNEKRQVSKEKGEKLALEYGIKF---METSAKANINVENAFFTLARDIKAKMD 174
Query: 75 ATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
+ N IT KS +C
Sbjct: 175 KRMEGNSPQGSNQGVKITQDQQKKSSFFRC 204
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPMKDAKEYAESIGAI--VVETSAKNAVNIEELFQGISQQIPPLDPH 173
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
+ N N I L T +C
Sbjct: 174 EISN--------NGAIKLGRQTSQTGRRC 194
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +E+ VD N+A+ E +P I ETSAK++TNVEE F +A ++KNR
Sbjct: 122 GNKTDLVNEKVVDSNQAKSFAESYGIPFI----ETSAKNATNVEECFISMARDIKNR 174
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL S++ V++ A+E + +P +ETSAK++TNVE+AF +A ++K+R
Sbjct: 121 GNKSDLTSKKVVEYGVAKEFADQLSIP----FLETSAKNATNVEQAFLTMAKQIKDR 173
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL R VD + A+ Y EI +ETSAKDS NVEEAF ++ +K ++ +
Sbjct: 120 GNKCDLAESRVVDTSVAQA---YADEIGIPFLETSAKDSINVEEAFLAMSEAIKKSKAGS 176
>gi|429326995|gb|AFZ78826.1| small GTP-binding protein [Coptotermes formosanus]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL+ REV NE EEM + + + +ETSA + NVE AF + E+
Sbjct: 113 LLGNKCDLDQRREVSKNEGEEMAKQIGAVF--LETSAFMNINVESAFVTIVREI 164
>gi|71004934|ref|XP_757133.1| 24 kDa RAS-like protein [Ustilago maydis 521]
gi|27752295|gb|AAO19640.1| small G-protein Ras1 [Ustilago maydis]
gi|46096763|gb|EAK81996.1| RASL_COPCI 24 kDa RAS-like protein [Ustilago maydis 521]
Length = 215
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NKCDLE ER+V +E E+ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGSHEGRELAK-----HFGCRFIETSAKQRINVDEAFSNLVREIRRY 173
Query: 73 QSATLCNEPINTDNTNSPITL 93
P T T +
Sbjct: 174 NKEQTMGRPGATGATTGSAGM 194
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 10 SAHDSR-VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLA 66
SA SR + NKCD+E++R+V ++E GE + + H + ETSAK S NVEE+F LA
Sbjct: 111 SAGVSRMLLGNKCDIEAKRKV----SKETGEKLAKEHGIRFFETSAKSSINVEESFTSLA 166
Query: 67 NEL 69
++
Sbjct: 167 RDI 169
>gi|145544282|ref|XP_001457826.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833814|emb|CAI39366.1| rab_A31 [Paramecium tetraurelia]
gi|124425644|emb|CAK90429.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 9 DSAHDSR---VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCL 65
D AH+S + NK DLESER+V +E ++ E IHY+ ETSAK V++ F +
Sbjct: 107 DCAHESVDIVIVGNKIDLESERQVSADEGKQFAEQ-YRIHYI-ETSAKTGQFVDQVFQQM 164
Query: 66 ANELKNRQSATLCNEPINTDNTNSPITLS 94
A + ++ + N+ I+ +N N I L
Sbjct: 165 AMRIHDK----IENKLIDQNNENLGIKLG 189
>gi|256066501|ref|XP_002570541.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
gi|350645538|emb|CCD59778.1| rab15, 13, 10, 1, 35, 5, and, putative [Schistosoma mansoni]
Length = 211
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR--Q 73
+ NKCDLE++R V + ++ + I ++ ETSAK NV EAF LA ++K + Q
Sbjct: 124 LLGNKCDLEAQRVVKYENGFKLAQSYG-ISFI-ETSAKGGINVSEAFTILARKIKAKREQ 181
Query: 74 SATLCNEP 81
A L N P
Sbjct: 182 EANLNNPP 189
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R+V + + E E + METSA DSTNV+ AF + E+ N S +
Sbjct: 125 GNKCDLENIRDVSVEDGTSLAE--AEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
Query: 78 CN 79
N
Sbjct: 183 LN 184
>gi|46136525|ref|XP_389954.1| RASL_COLTR Ras-like protein [Gibberella zeae PH-1]
gi|408399918|gb|EKJ79008.1| hypothetical protein FPSE_00865 [Fusarium pseudograminearum CS3096]
Length = 216
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLE ER+V E E + +ETSAK NV++AFY + E++ NR+
Sbjct: 120 VVGNKCDLEGERDVSRQEGEALARSFG--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 177
Query: 74 SATLCNEPINTDNTNSP 90
T N P
Sbjct: 178 MQGYSTGSGGTSGANGP 194
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD + A E + + +I + +ETSAKDSTNVE+AF +A ++ R
Sbjct: 123 GNKCDLTTKKVVDHSTAAEFAKQL-DIPF-LETSAKDSTNVEQAFKKMAEDIMARMG 177
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 175
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 176 ATVNNKP 182
>gi|304600|gb|AAC37386.1| Rab1B, partial [Dictyostelium discoideum]
gi|739975|prf||2004272B rab1B gene
Length = 199
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL ++ VD + A E + V I + ETSAK S NVE+AF +A+E+K Q
Sbjct: 113 GNKCDLIEKKIVDTSTAREYADSVG-IPF-KETSAKSSANVEQAFMIMASEIKKLQGGI- 169
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P N N+ + I K C
Sbjct: 170 --QPNNNSTYNAHVVKPTGFTPIGKKKKC 196
>gi|363730697|ref|XP_428301.3| PREDICTED: ras-related protein Rab-31 [Gallus gallus]
Length = 226
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 147 IAGNKCDLSDIREVPMKDAKEYAESIGAI--VVETSAKNAVNIEELFQGISQQI------ 198
Query: 76 TLCNEPINT--DNTNSPITLSNDTKSIRNKC 104
P++ + N I L T +C
Sbjct: 199 ----PPLDPHENGNNGAIKLGRQTSQTGRRC 225
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AFY LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT +S +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDQQKRSSFFRC 204
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
Length = 200
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 119 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 174
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 175 ATVNNKP 181
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 10/62 (16%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDSTNVE+AF +A E+K +
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELG--IP----FLETSAKDSTNVEQAFLTMAAEIKKKM 173
Query: 74 SA 75
+
Sbjct: 174 GS 175
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ REV E++ + E E + +ETSA ++TNV +AF + E+ N S
Sbjct: 122 GNKCDLETLREVPIEESKALAE--AEKLFFIETSALNATNVNDAFQIVIKEVYNNMS--- 176
Query: 78 CNEPINTDNTNSPITLSNDTKSI 100
+ +N+D + P LSN + +
Sbjct: 177 -RKALNSD-SYKPKLLSNRSTKV 197
>gi|50285477|ref|XP_445167.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524470|emb|CAG58067.1| unnamed protein product [Candida glabrata]
Length = 339
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCL 65
V NK DLE+ER+V F E + + + P +ETSAK + NVE+AFY L
Sbjct: 118 VVGNKSDLETERQVSFEEGASLAKQLNAP----FLETSAKQAINVEDAFYTL 165
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMEDKKAVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 175
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 176 ATVNNKP 182
>gi|409048982|gb|EKM58460.1| hypothetical protein PHACADRAFT_252796 [Phanerochaete carnosa
HHB-10118-sp]
Length = 215
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
+ +NKCDLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 IVANKCDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFTNLVREIRK 172
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NK DL ++ VD+N A+E + + +I + +ETSA +STNVE+AF+ +A ++K
Sbjct: 120 GNKSDLTDKKSVDYNVAKEFADAL-DIPF-LETSALNSTNVEQAFFTMARQIK 170
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD E +R+V F + + + + + + + +E SAK + NV+EAF+ LA E+K ++
Sbjct: 121 GNKCDCEDQRQVSFEQGQALADELG-VKF-LEASAKTNVNVDEAFFTLAREIKKQK 174
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 NKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCD E +R V + +++ + +P +E SAK++ N+E+AFY LA+E+K +
Sbjct: 412 NKCDWEEKRAVSTEQGQQLADELGIP----FLEVSAKNNINIEKAFYNLASEIKKGMDTS 467
Query: 77 LCNEP 81
+P
Sbjct: 468 KSEQP 472
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL +++ VD+ A+E + +P +ETSAK++ NVE+AF +A E+K R
Sbjct: 123 GNKCDLHTKKVVDYTIAKEYADQLGIP----FLETSAKNAMNVEQAFMTMAAEIKLR 175
>gi|156366233|ref|XP_001627044.1| predicted protein [Nematostella vectensis]
gi|156213941|gb|EDO34944.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+E ER V ++ +++ + + Y ETSAKD+TNV++ F L + + ++ S +L
Sbjct: 133 GNKCDMEEERVVSYDRGKQLADQLGLEFY--ETSAKDNTNVKKVFERLVDIICDKMSQSL 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P T + +N+ NC
Sbjct: 191 DTDPTIVSGQKPGTTKLTAERPKQNQDNC 219
>gi|119498685|ref|XP_001266100.1| rab15, 13, 10, 1, 35, 5, and [Neosartorya fischeri NRRL 181]
gi|119414264|gb|EAW24203.1| rab15, 13, 10, 1, 35, 5, and [Neosartorya fischeri NRRL 181]
Length = 159
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+E ++ V++ A+E + + I + +ETSAK+++NVE+AF +A ++K R +AT
Sbjct: 78 GNKSDMEDKKVVEYTVAKEFADSLG-IPF-LETSAKNASNVEQAFLTMARQIKERMGTAT 135
Query: 77 LCNEP 81
+ N+P
Sbjct: 136 VNNKP 140
>gi|115432930|ref|XP_001216602.1| GTP-binding protein ypt1 [Aspergillus terreus NIH2624]
gi|114189454|gb|EAU31154.1| GTP-binding protein ypt1 [Aspergillus terreus NIH2624]
Length = 163
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 82 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 137
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 138 ATVNNKP 144
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 10/62 (16%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + VD A +E+G +P +ETSAKDSTNVE+AF +A E+K +
Sbjct: 123 GNKCDLVENKVVDTQTAKAFADELG--IP----FLETSAKDSTNVEQAFLTMAAEIKKKM 176
Query: 74 SA 75
+
Sbjct: 177 GS 178
>gi|256078263|ref|XP_002575416.1| rab5 [Schistosoma mansoni]
gi|353230409|emb|CCD76580.1| putative rab5 [Schistosoma mansoni]
Length = 198
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NK DLE +R V F EA+E + METSAK STNV E F +A EL
Sbjct: 120 GNKVDLEGQRAVSFEEAQEYAD--KNRLLFMETSAKISTNVSELFTAIAREL 169
>gi|440299788|gb|ELP92325.1| hypothetical protein EIN_122460 [Entamoeba invadens IP1]
Length = 198
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLESER+V ++A+++ + + Y ETSAK+ TN+ E F L ++ R +
Sbjct: 118 GNKCDLESERQVFTDDAKKVADEWKILFY--ETSAKNKTNITETFQGLVRDI--RANVKF 173
Query: 78 CNEPINTDNT-NSPITLSNDTKSIRNKCNC 106
+ P+N T N P+ RNK C
Sbjct: 174 EDVPVNNITTQNKPLK--------RNKKGC 195
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ R+V ++E GE + H + METSA S NVEEAFY LA ++K +
Sbjct: 118 ILGNKCDMNELRQV----SKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLARDIKEK 172
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL ++ V +E + EI METSAK+++NVE+AF +A E+KNR
Sbjct: 120 GNKSDLSDKKVV---SSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N+ P T+ + + K C
Sbjct: 173 MASQPANSAR---PATVQIRGQPVNQKAGC 199
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK STNVEEAF LA ++ R
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSTNVEEAFVTLARDIMTR 172
>gi|50554407|ref|XP_504612.1| YALI0E30943p [Yarrowia lipolytica]
gi|49650481|emb|CAG80216.1| YALI0E30943p [Yarrowia lipolytica CLIB122]
Length = 186
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 12/66 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEM-----GEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
+ NK DL+S+R+V EA+E+ G +V ETSA+D TNV +AF L E++
Sbjct: 116 IVGNKSDLDSQRQVSVEEAKELAASWGGAFV-------ETSARDGTNVAKAFELLVEEIE 168
Query: 71 NRQSAT 76
Q+ T
Sbjct: 169 KTQNKT 174
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 116 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 171
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 172 ATVNNKP 178
>gi|432926118|ref|XP_004080838.1| PREDICTED: ras-related protein Rab-37-like [Oryzias latipes]
Length = 207
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NK D+ SER + +E E + EY VP METSAK NVE AF +A ELK R
Sbjct: 124 LLGNKADMSSERAIRRDEGERLAREYSVP----FMETSAKTGVNVELAFTAIAKELKQR 178
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL+ ++ VDF A+E + +P V+ETSA DS+NVEEAF +A ++K S
Sbjct: 120 GNKNDLKDKKVVDFEVAKEFADSLSIP----VLETSALDSSNVEEAFLTMARQIKETMS 174
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSMNVEEAFFILARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V NKCD+ +R+V ++E GE + I Y +ETSAK S NVEE FY LA ++ R
Sbjct: 118 VLGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSINVEEGFYTLARDIMAR 172
>gi|327287672|ref|XP_003228552.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39A-like
[Anolis carolinensis]
Length = 253
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+KCDLE+ER+V EAEE+ + Y+ ETSAKD+ NVEE+F L ++
Sbjct: 162 GHKCDLETERQVSREEAEELASNCG-MRYI-ETSAKDAINVEESFMILTRDI 211
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL ++ V +E + EI METSAK+++NVE+AF +A E+KNR
Sbjct: 120 GNKSDLSDKKVV---SSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N+ P T+ + + K C
Sbjct: 173 MASQPANSAR---PATVQIRGQPVNQKAGC 199
>gi|349929498|dbj|GAA28715.1| Ras-related protein Rab-2A, partial [Clonorchis sinensis]
Length = 201
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVM--ETSAKDSTNVEEAFYCLANELKNR 72
NKCDL+S REV +EAE H ++ ETSAK NVEEAF C A + R
Sbjct: 102 GNKCDLDSRREVGRDEAEAFARE----HGLLFTETSAKTGINVEEAFACTARAIYER 154
>gi|302506364|ref|XP_003015139.1| hypothetical protein ARB_06900 [Arthroderma benhamiae CBS 112371]
gi|302656436|ref|XP_003019971.1| hypothetical protein TRV_05939 [Trichophyton verrucosum HKI 0517]
gi|291178710|gb|EFE34499.1| hypothetical protein ARB_06900 [Arthroderma benhamiae CBS 112371]
gi|291183749|gb|EFE39347.1| hypothetical protein TRV_05939 [Trichophyton verrucosum HKI 0517]
Length = 109
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+E ++ V++ A+E + + I + +ETSAK+++NVE+AF +A ++K R +AT
Sbjct: 28 GNKSDMEDKKVVEYTVAKEFADSLG-IPF-LETSAKNASNVEQAFLTMARQIKERMGTAT 85
Query: 77 LCNEP 81
+ N+P
Sbjct: 86 VNNKP 90
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPE-IHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL S+R++ EAEE Y E + METSAK S NV E FY +A +L Q A
Sbjct: 122 GNKADLSSKRKI---EAEEGQSYAEENGLFFMETSAKTSQNVNELFYEIARKLPKAQPAQ 178
Query: 77 LCNEPINTDNTNSPITLSNDT 97
+ TD + S + + T
Sbjct: 179 ASGMSL-TDGSTSRLGPAKST 198
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 175
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 176 ATVNNKP 182
>gi|242807968|ref|XP_002485066.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715691|gb|EED15113.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 92 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 147
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 148 ATVNNKP 154
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPE-IHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL ++R+V EAEE Y E + METSAK + NV E FY +A +L Q A
Sbjct: 122 GNKADLSAKRKV---EAEEGQSYAEENGLFFMETSAKTAQNVNELFYEIARKLPKAQPAQ 178
Query: 77 LCNEPINTDNTNSPITLSNDT 97
+ TD ++S +T + T
Sbjct: 179 ATGVSL-TDKSSSRLTPAKTT 198
>gi|126308787|ref|XP_001378194.1| PREDICTED: ras-related protein Rab-37-like [Monodelphis domestica]
Length = 273
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ ER V + + + EY VP METSAK NVE AF +A ELK+R
Sbjct: 189 LLGNKADVNRERVVRSEDGQTLAREYGVP----FMETSAKTGMNVELAFLAIARELKHRA 244
Query: 74 SATLCNEP 81
NEP
Sbjct: 245 GQQQPNEP 252
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD E +R V + A+E+G +P ME SAK + NV++AFY LA ++K R
Sbjct: 122 GNKCDWEEKRAVSTEQGQALADELG--IP----FMEVSAKSNINVDKAFYSLATDIKKRI 175
Query: 74 SATLCNEPINTDNTN 88
T +P +T+N N
Sbjct: 176 VDT--QQPAHTNNQN 188
>gi|226287904|gb|EEH43417.1| GTP-binding protein YPTM2 [Paracoccidioides brasiliensis Pb18]
Length = 161
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+E ++ V++ A+E + + I + +ETSAK ++NVE+AF +A ++K R +AT
Sbjct: 80 GNKSDMEDKKVVEYTVAKEFADSLG-IPF-LETSAKSASNVEQAFLTMARQIKERMGTAT 137
Query: 77 LCNEP 81
+ N+P
Sbjct: 138 VNNKP 142
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|358393893|gb|EHK43294.1| ras-like GTPase Ras1 [Trichoderma atroviride IMI 206040]
Length = 214
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLE EREV E E + + +ETSAK NV++AFY + E++ NR+
Sbjct: 120 VVGNKCDLEGEREVTRQEGEALAKSFN--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 177
Query: 74 SATLCNEPINTDNTNSP 90
N+ + N P
Sbjct: 178 MQGYSTGGGNSSSANPP 194
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 175
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 176 ATVNNKP 182
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +E+ VD N+A+ E + I ++ ETSAK++TNVEE F +A ++KNR
Sbjct: 120 GNKTDLVNEKVVDTNQAKSFAESMG-IPFI-ETSAKNATNVEECFCSMARDIKNR 172
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S+R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 132 GNKADLASKRAVDFQEAQSYAD--DNSLLFMETSAKTSVNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP N ++ + L+ T+ R++C
Sbjct: 184 -NEPQNPGANSARGRGVDLTEPTQPTRSQC 212
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL R V ++ A+ + + I + ME SAK +TNVE+AF +A E+KNR +
Sbjct: 120 GNKSDLNDNRAVSYDTAKAFADEIG-IPF-MEASAKSATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+P N P T+ + + K C
Sbjct: 174 ATQP--ASNNAKPPTVQIRGQPVNQKNGC 200
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|429848874|gb|ELA24310.1| ras small monomeric GTPase [Colletotrichum gloeosporioides Nara
gc5]
Length = 214
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLE EREV E E + + +ETSAK NV++AFY + E++ NR+
Sbjct: 118 VVGNKCDLEGEREVTRQEGEALAKSFG--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 175
Query: 74 SATLCNEPINTDNTNSP 90
N P
Sbjct: 176 MQGYSTGSGGASGINGP 192
>gi|410049418|ref|XP_510465.4| PREDICTED: ras-related protein Rab-8B [Pan troglodytes]
Length = 226
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++
Sbjct: 137 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSANVEEAFFTLARDI--- 188
Query: 73 QSATLCNEPINTDNT---NSPITLS 94
T N +N N+ P+ ++
Sbjct: 189 --MTKLNRKMNDSNSAGAGGPVKIT 211
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|15281851|gb|AAK94462.1| GTP binding protein Rab1a [Bos taurus]
Length = 94
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ D+ A+E + + I + +ETSAK++TNVE++F +A E+K R
Sbjct: 12 GNKCDLTTKKVEDYTTAKEFADSLG-IPF-LETSAKNATNVEQSFMTMAAEIKKRMG 66
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + VD EA+ + + + +ETSAK+S NVE+AF +++E+K R +
Sbjct: 121 GNKCDLVDSKVVDTEEAKALADSLGMTF--LETSAKESINVEKAFLTMSSEIKKRMA 175
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 138 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGT 193
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 194 ATVNNKP 200
>gi|240276994|gb|EER40504.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 109
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+E ++ V++ A+E + + I + +ETSAK ++NVE+AF +A ++K R +AT
Sbjct: 28 GNKSDMEDKKAVEYTVAKEFADSLG-IPF-LETSAKSASNVEQAFLTMARQIKERMGTAT 85
Query: 77 LCNEP 81
+ N+P
Sbjct: 86 VNNKP 90
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 132 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSVNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP NT +S + L+ T+ +++C
Sbjct: 184 -NEPQNTGANSSRGRGVDLTEPTQPTKSQC 212
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD + A E + + +I + +ETSAKDSTNVE+AF +A ++ R
Sbjct: 123 GNKCDLTTKKVVDHSTAAEFAKQL-DIPF-LETSAKDSTNVEQAFKKMAEDIMARMG 177
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 8 PDSAHDSRVWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLA 66
D A + + NKCD++ +REV E ++ EY + ETSAK+ NVE+ F +A
Sbjct: 113 ADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQF---FETSAKNDINVEKGFITIA 169
Query: 67 NELKNRQSA 75
E+K+R A
Sbjct: 170 REVKDRLMA 178
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE++R V EA+ + + I + +ETSAK+++NVE+AF +A+++K+R +
Sbjct: 120 GNKSDLEAKRAVTTEEAKAFADTLG-IEF-LETSAKNASNVEKAFMMMASQIKSRMKSQP 177
Query: 78 CNEP 81
P
Sbjct: 178 TGAP 181
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+E +R V + E++ EY VP ETSAK +VEEAF+ +A +K +
Sbjct: 118 ILGNKCDMEDKRVVSTEQGEKLAAEYGVP----FFETSAKSKIHVEEAFFAMARSIKQKM 173
Query: 74 SATLCNEP-------INTDNTNSP 90
+ + P I DN P
Sbjct: 174 DSKEVSTPHEHEKDIIKPDNKPEP 197
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD A++ + + I + +ETSAK+STNVEEAF +A+ +K R + +
Sbjct: 120 GNKCDLVTKKAVDTQMAKDFADSLG-IPF-LETSAKNSTNVEEAFIQMASGIKARLAVS 176
>gi|115461619|ref|NP_001054409.1| Os05g0105200 [Oryza sativa Japonica Group]
gi|113577960|dbj|BAF16323.1| Os05g0105200, partial [Oryza sativa Japonica Group]
Length = 116
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + VD EA+ E + I + +ETSAK+S NVEEAF +++++K R +
Sbjct: 30 GNKCDLVDSKVVDTEEAKAFAESLG-ISF-LETSAKESINVEEAFLTMSSDIKKRMA 84
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 132 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP N ++ + L+ T+ RN+C
Sbjct: 184 -NEPQNPGANSARGGGVDLTEPTQPTRNQC 212
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNERRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L +N IT KS +C
Sbjct: 174 DKKLEGNSPQGNNQGVKITPDQQKKSSFFRC 204
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
Length = 200
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD A++ + + I + +ETSAK+STNVEEAF +A+ +K R + +
Sbjct: 120 GNKCDLVTKKAVDTQMAKDFADSLG-IPF-LETSAKNSTNVEEAFIQMASGIKARLAVS 176
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD A++ + + I + +ETSAK+STNVEEAF +A+ +K R + +
Sbjct: 120 GNKCDLVTKKAVDTQMAKDFADSLG-IPF-LETSAKNSTNVEEAFIQMASGIKARLAVS 176
>gi|388454460|ref|NP_001253365.1| ras-related protein Rab-31 [Macaca mulatta]
gi|402902630|ref|XP_003914202.1| PREDICTED: ras-related protein Rab-31-like [Papio anubis]
gi|380809112|gb|AFE76431.1| ras-related protein Rab-31 [Macaca mulatta]
gi|384945010|gb|AFI36110.1| ras-related protein Rab-31 [Macaca mulatta]
Length = 194
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI------ 167
Query: 76 TLCNEPINT-DNTNSPITLSNDTKSIRNKC 104
P++ +N N+ I L T +C
Sbjct: 168 ----PPLDPHENGNNGIKLVKPTSQASRRC 193
>gi|395332118|gb|EJF64497.1| ras protein [Dichomitus squalens LYAD-421 SS1]
Length = 216
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NK DLE ER+V NE ++ + H+ +ETSAK NV+EAF+ L E++
Sbjct: 119 VVANKSDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFHQLVREIRK 172
>gi|194381626|dbj|BAG58767.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 118 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPK------ 169
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP N ++ + L+ T+ RN+C
Sbjct: 170 -NEPQNPGANSARGRGVDLTEPTQPTRNQC 198
>gi|291000949|ref|XP_002683041.1| ras family small GTPase [Naegleria gruberi]
gi|284096670|gb|EFC50297.1| ras family small GTPase [Naegleria gruberi]
Length = 212
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DL++ER V +++GE + ETSAK+ N+EE+F LA ++ ++++
Sbjct: 131 IIGNKADLQNERAVSNQSLQKLGERFKGKIPIFETSAKEKINIEESFMALARQIFDKKTG 190
>gi|6469129|emb|CAB61746.1| RAS-like protein [Cicer arietinum]
Length = 98
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLE+ REV E + + E E + METSA +STNV+ AF + E+ N S
Sbjct: 5 LVGNKCDLENIREVSTEEGKTLAE--EEGLFFMETSALESTNVQTAFEIVIREIYNNISR 62
Query: 76 TLCN-EPINTDNTNSPITLSNDTKSIRNKCN 105
+ N + + + + ++L N S +N N
Sbjct: 63 KVLNSDSYKAELSVNRVSLVNGAGSKKNLLN 93
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCD +R+V + E++ I + METSAK + N+E AF+ LA ++K +
Sbjct: 118 ILGNKCDANDKRQVSREQGEKLAASFG-IKF-METSAKANINIENAFFTLARDIKAKMDK 175
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT KS +C
Sbjct: 176 KLEGNSPQGSNQGVKITQDQQKKSSFFRC 204
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 1095 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 1150
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 1151 ATVNNKP 1157
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D+ ++ VD+ A+E + + I + +ETSAK+++NVE+AF +A ++K R ++
Sbjct: 120 GNKSDMADKKVVDYQVAKEFADSLG-IPF-LETSAKNASNVEQAFLTMARQIKERMGSS- 176
Query: 78 CNEPINTDNTNSPITLS 94
I T+NT + + +S
Sbjct: 177 ----IATNNTKANVNVS 189
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NK DL ++R+V E ++ E + Y ETSAKD + V+EAF+ L ++K R
Sbjct: 125 LIGNKTDLGAQRKVSTEEGRKLAEQLNMAFY--ETSAKDKSMVDEAFFALTRDIKKR 179
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN--RQSA 75
NKCDL S R V +A+E + E + METSA +STNVE AF + E+ +
Sbjct: 126 GNKCDLGSLRAVPIEDAQEFAQ--RENLFFMETSALESTNVETAFLTVLTEIYRVISKKT 183
Query: 76 TLCNEPINTDNTNSPI 91
NE ++T+ T+ +
Sbjct: 184 LTANEELDTNGTSGLL 199
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+E++R+V +E GE + + H + ETSAK S NV+E+F LA ++ +
Sbjct: 118 LLGNKCDMENKRKV----PKERGEKLAKEHGIRFFETSAKSSLNVDESFNTLATDILMKI 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
S + P+ L +K NKC+
Sbjct: 174 SKR------SAPGVKDPVDLKGSSKKGSNKCSV 200
>gi|355778096|gb|EHH63132.1| Ras-related protein Rab-8B, partial [Macaca fascicularis]
Length = 171
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++
Sbjct: 82 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSANVEEAFFTLARDI--- 133
Query: 73 QSATLCNEPINTDNT---NSPITLS 94
T N +N N+ P+ ++
Sbjct: 134 --MTKLNRKMNDSNSAGAGGPVKIT 156
>gi|290999034|ref|XP_002682085.1| rab family small GTPase [Naegleria gruberi]
gi|284095711|gb|EFC49341.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDL ++ V+ + + + +P METSAK++ NVEEAF+ +A E+K+R
Sbjct: 127 LIGNKCDLIEKKIVETERGQSLAKSYGIP----FMETSAKNNINVEEAFFTIAREIKSRL 182
Query: 74 SATLCNEPINTDNTNS 89
+ EPI D++ S
Sbjct: 183 IDSGEVEPIVEDSSPS 198
>gi|57863915|gb|AAS88841.2| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
gi|215692920|dbj|BAG88340.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 114
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + VD EA+ E + I + +ETSAK+S NVEEAF +++++K R +
Sbjct: 28 GNKCDLVDSKVVDTEEAKAFAESLG-ISF-LETSAKESINVEEAFLTMSSDIKKRMA 82
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +++ VD+ A+E + + I + +ETSAK+ NVE++F +A E+K R
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLG-IPF-LETSAKNEKNVEQSFMTMAAEIKKRMG 177
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL ++ V++ A+E + +P +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 121 GNKSDLTGKKVVEYTVAKEFADQLNIP----FLETSAKNATNVEQAFLTMAKQIKDRMGS 176
Query: 76 TLCNEPINTDNTNSP 90
+T +P
Sbjct: 177 ATAPTGAAKSSTVTP 191
>gi|340509111|gb|EGR34677.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 202
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE-LKNRQS 74
+ +NKCD++ +R+V E EE+ E ++ ETSAKD N+ EAF +A + L N
Sbjct: 121 IIANKCDMKDDRKVSQKEGEELAEKYGVKYF--ETSAKDGQNIGEAFKSIAKQALDNIDI 178
Query: 75 ATLCNEPINTDNTNS 89
+ + IN N+
Sbjct: 179 SNMKGAGINVHGNNA 193
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSMNVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + N+ P+ ++
Sbjct: 173 LNRKMNDS--NSSGAGGPVKIT 192
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL+ ++ VD+ A+E + + EI ++ETSA DSTNVE+AF+ +A ++K++
Sbjct: 120 GNKSDLKDKKVVDYTVAKEFADAL-EIP-LIETSALDSTNVEQAFFNMARQIKSQ 172
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D +REV +EAEE+ IH + METSAK + N++ AF LAN++ N+
Sbjct: 119 ILGNKVDEADKREVLKSEAEEL----ARIHSIRFMETSAKTNINIDAAFLGLANDILNKM 174
Query: 74 SA--TLCNEPINTDNTNSP 90
+ +E I+ N + P
Sbjct: 175 PGKRSQASETISIQNHSRP 193
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V NKCD+ R+V ++E GE + I Y +ETSAK S NVEEAF LA ++ +R
Sbjct: 118 VLGNKCDMNDRRQV----SKERGEKLA-IDYSIKFLETSAKSSINVEEAFLTLARDIMSR 172
Query: 73 QSATLCNEP 81
+ + N+
Sbjct: 173 LNRKMHNDS 181
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL +++ VD A++ + + I + +ETSAK+STNVEEAF +A+ +K R + +
Sbjct: 120 GNKCDLVTKKAVDTQMAKDFADSLG-IPF-LETSAKNSTNVEEAFIQMASGIKARLAVS 176
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 132 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP N ++ + L+ T+ RN+C
Sbjct: 184 -NEPQNPGANSARGRGVDLTEPTQPTRNQC 212
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|426379395|ref|XP_004056383.1| PREDICTED: ras-related protein Rab-8B [Gorilla gorilla gorilla]
Length = 209
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++
Sbjct: 120 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSANVEEAFFTLARDI--- 171
Query: 73 QSATLCNEPINTDNT---NSPITLS 94
T N +N N+ P+ ++
Sbjct: 172 --MTKLNRKMNDSNSAGAGGPVKIT 194
>gi|270010835|gb|EFA07283.1| hypothetical protein TcasGA2_TC014518 [Tribolium castaneum]
Length = 208
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+LE +R+V E++ EY I ++ ETSAK S VEEAF+ LA ++K +
Sbjct: 118 LLGNKCELEEKRQVSKERGEQLAIEY--GIKFI-ETSAKASIRVEEAFFTLARDIKAKME 174
Query: 75 ATL 77
L
Sbjct: 175 KKL 177
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NKCDL REV EA + E E + METSAKD+ NVEEAF + +
Sbjct: 109 GNKCDLHQSREVQEEEARHLAEL--ENLFFMETSAKDNLNVEEAFLEMVRRI 158
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R V E + + E + + METSA DSTNV AF + E+ N S +
Sbjct: 125 GNKCDLENIRAVSIEEGKSLAE--AQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKV 182
Query: 78 CN 79
N
Sbjct: 183 LN 184
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLE++R+V +A+E E E + +ETSA ++TNVE AF + E+ N
Sbjct: 132 GNKCDLENQRDVPTEDAKEFAE--KEGLFFLETSALEATNVETAFITVLTEIYN 183
>gi|91083485|ref|XP_971858.1| PREDICTED: similar to ras-related protein Rab-8A, putative
[Tribolium castaneum]
Length = 221
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKC+LE +R+V E++ EY I ++ ETSAK S VEEAF+ LA ++K +
Sbjct: 133 GNKCELEEKRQVSKERGEQLAIEY--GIKFI-ETSAKASIRVEEAFFTLARDIKAKMEKK 189
Query: 77 L 77
L
Sbjct: 190 L 190
>gi|3929359|sp|O42785.1|RASL_COLTR RecName: Full=Ras-like protein; AltName: Full=Ct-Ras; Flags:
Precursor
gi|2906025|gb|AAC03781.1| Ras homolog [Colletotrichum trifolii]
gi|310795571|gb|EFQ31032.1| Ras family protein [Glomerella graminicola M1.001]
Length = 214
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLE EREV E E + + +ETSAK NV++AFY + E++ NR+
Sbjct: 118 VVGNKCDLEGEREVTRQEGEALAKSFG--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 175
Query: 74 SATLCNEPINTDNTNSP 90
N P
Sbjct: 176 MQGYSTGSGGASGINGP 192
>gi|410078810|ref|XP_003956986.1| hypothetical protein KAFR_0D02040 [Kazachstania africana CBS 2517]
gi|372463571|emb|CCF57851.1| hypothetical protein KAFR_0D02040 [Kazachstania africana CBS 2517]
Length = 274
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NK DLESER+V F E E+MG + + ETSAK N++ AF L L++
Sbjct: 123 VIGNKSDLESERQVSFKEGEQMGCNISGPFF--ETSAKYGLNIDVAFQSLVRLLRD 176
>gi|157822741|ref|NP_001101618.1| ras-related protein Rab-39A [Rattus norvegicus]
gi|149041681|gb|EDL95522.1| RAB39, member RAS oncogene family (predicted) [Rattus norvegicus]
Length = 217
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+KCDL S+R+V EAE++ + + Y+ ETSAKD+TNVEE+F LA ++
Sbjct: 126 GHKCDLASQRQVSREEAEKLSKDCG-MKYI-ETSAKDATNVEESFTILARDI 175
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLE++R+V +A+E E E + +ETSA ++TNVE AF + E+ N
Sbjct: 125 GNKCDLENQRDVPTEDAKEFAE--KEGLFFLETSALEATNVETAFITVLTEIYN 176
>gi|291413290|ref|XP_002722907.1| PREDICTED: RAB19, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 217
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D ER V F EA + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKSDRWEERHVLFEEACTLAEK-HGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E +N+ +S L S + C C
Sbjct: 188 YGESALNSLPLDSSPVLVAQRPSEKTHCTC 217
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA R
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSANVEEAFFTLA-----R 167
Query: 73 QSATLCNEPINTDNT---NSPITLS 94
T N +N N+ P+ ++
Sbjct: 168 DIMTKLNRKMNDSNSAGAGGPVKIT 192
>gi|344230921|gb|EGV62806.1| hypothetical protein CANTEDRAFT_115635 [Candida tenuis ATCC 10573]
gi|344230922|gb|EGV62807.1| ras-like protein [Candida tenuis ATCC 10573]
Length = 233
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDLE+ER+V + E E + + + ETSAK NVEEAF+ L +++
Sbjct: 114 IIGNKCDLENERQVSYEEGELLAKSFNGCKF-FETSAKQRINVEEAFFELVRSVRD 168
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+E +R+V ++ EY + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDMEDKRQVSRERGAQLAIEYGVKF---METSAKANINVESAFFTLARDIKAKAQ 174
Query: 75 ATLC 78
L
Sbjct: 175 KNLV 178
>gi|426233180|ref|XP_004010595.1| PREDICTED: ras-related protein Rab-8B [Ovis aries]
Length = 207
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA R
Sbjct: 118 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSMNVEEAFFTLA-----R 167
Query: 73 QSATLCNEPINTDNTNSP 90
T N +N N++
Sbjct: 168 DIMTKLNRKMNDSNSSGA 185
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL----KN 71
+ NKCD+E++R+V +AE++ I + ETSAK S NV+EAF LA ++
Sbjct: 118 LLGNKCDMEAKRQVQREQAEKLARE-HRIRF-FETSAKSSVNVDEAFSSLARDILLKTGG 175
Query: 72 RQSAT 76
R+S T
Sbjct: 176 RRSGT 180
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR--- 72
+ NKCD+E +R+V ++AE++ I + ETSAK S NVEEAF LA ++ R
Sbjct: 118 LLGNKCDMEVKRKVSRDQAEKLCRE-HGIRF-FETSAKSSLNVEEAFNTLARDILLRSIK 175
Query: 73 QSATLCNEPINTDNT 87
+SA L P+ T
Sbjct: 176 KSAQLPKRPLELKAT 190
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCD+E++R+V +A ++ + I + ETSAK S NV+EAF CLA ++
Sbjct: 118 LLGNKCDMEAKRKVRKEQATKLAQE-HGIRF-FETSAKSSVNVDEAFSCLARDI 169
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL +R V + A+ + + I + METSAK++ NVE+AF ++ +K+R +
Sbjct: 120 GNKCDLTDKRVVSYETAKAFADEIG-IPF-METSAKNALNVEQAFMAMSASIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K +C
Sbjct: 174 ASQP--AANNARPATVQIRGQPVEQKTSC 200
>gi|331238167|ref|XP_003331739.1| Ras-like protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310729|gb|EFP87320.1| Ras-like protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 214
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V +E E+ H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGAHEGRELAR-----HFGCRFIETSAKQRINVDEAFSSLVKEIRR 173
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-S 74
NK D+E ++ V++ A+E + +P +ETSAK ++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMEDKKVVEYTVAKEFADSLGIP----FLETSAKSASNVEQAFLTMARQIKERMGT 175
Query: 75 ATLCNEP 81
AT+ N+P
Sbjct: 176 ATVNNKP 182
>gi|344291198|ref|XP_003417323.1| PREDICTED: ras-related protein Rab-37-like [Loxodonta africana]
Length = 216
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NK D+ SERE+ + E + EY VP METSAK NVE AF +A ELK R
Sbjct: 133 LLGNKADVSSEREIRSEDGETLAREYGVP----FMETSAKTGMNVELAFLAIAKELKYR 187
>gi|449275624|gb|EMC84415.1| Ras-related protein Rab-31, partial [Columba livia]
Length = 187
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ RQ
Sbjct: 108 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAVNIEELFQGIS-----RQIP 160
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L +P N N I L T +C
Sbjct: 161 PL--DPHENGN-NGAIKLGKQTSQTGRRC 186
>gi|167526387|ref|XP_001747527.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773973|gb|EDQ87607.1| predicted protein [Monosiga brevicollis MX1]
Length = 179
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCDLE +REV EA+ + + VP +ETSAK V+EAFY L E++ +
Sbjct: 104 ICGNKCDLEDKREVSTEEAKALAKQYGVP----FLETSAKRRIKVDEAFYDLVREIRKVK 159
Query: 74 SATL 77
L
Sbjct: 160 QPAL 163
>gi|401623105|gb|EJS41223.1| ras2p [Saccharomyces arboricola H-6]
Length = 322
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLA 66
V NK DLE+E++V + + M + + P +ETSAK + NVEEAFY LA
Sbjct: 120 VVGNKSDLENEKQVSYQDGLNMAKQMNAP----FLETSAKQAINVEEAFYTLA 168
>gi|440800157|gb|ELR21200.1| Raslike protein rasG, putative [Acanthamoeba castellanii str. Neff]
Length = 194
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLES+R+V E + + + +ETSAK NV+E F+ E++
Sbjct: 108 VVGNKCDLESQRQVAVAEGAALAQSLGGGCVFLETSAKADMNVQECFFAAVREIRR 163
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 13 DSRVWSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
D + NK DL+ ++ VD+ A+E + +P +ETSAK++TNVE+AF +A +K
Sbjct: 248 DKLLVGNKSDLQQKKVVDYTVAKEFADQLAIP----FLETSAKNATNVEQAFLVMAEHIK 303
Query: 71 NR 72
R
Sbjct: 304 RR 305
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK D E +R V + EE+ + + I Y+ ETSAK ++NVEEAF+ LA E+K R
Sbjct: 121 GNKSDWEEKRAVTTEQGEELAKELG-IPYI-ETSAKSNSNVEEAFFNLAREVKTR 173
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NKCD+E R+V E E+ ++ EI + +ETSAK+S NVE +F ++NE+K
Sbjct: 144 GNKCDMEESRKVSHEEGMELAKHY-EIPF-LETSAKNSINVETSFITMSNEIK 194
>gi|388582968|gb|EIM23271.1| rab GTPase SrgA [Wallemia sebi CBS 633.66]
Length = 207
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCD + +R + ++ +E+ + + EI ++ ETSAK++ VE+AF+ LA ++K+R
Sbjct: 123 GNKCDWDEKRAITQDQGKELADSL-EIKFI-ETSAKNNVGVEDAFFTLARDIKSR 175
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + + V + A+ + + I + METSAK++TNVE+AF +A ++KNR +
Sbjct: 120 GNKSDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAADIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--AANNARPPTVQIRGQPVNQKSGC 200
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL + + V + A+ + + I + METSAK++TNVE+AF +A ++K R ++
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAADIKTRMAS 175
>gi|149390999|gb|ABR25517.1| ras related protein ric1 [Oryza sativa Indica Group]
Length = 77
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 48 METSAKDSTNVEEAFYCLANELKNR---QSATLCNEPINTDNTNSPI 91
+ETSAKD+TNVE+AF +A E+KNR Q AT ++P P+
Sbjct: 23 LETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPV 69
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL+ ++ VDF A E + +P V+ETSA DS+NVEEAF +A ++K S
Sbjct: 120 GNKNDLKDKKVVDFEVAREFADSLNIP----VLETSALDSSNVEEAFLTMARQIKETMS 174
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL----KN 71
+ NKCD+E++R+V +AE++ I + ETSAK S NV+EAF LA ++
Sbjct: 118 LLGNKCDMEAKRQVQREQAEKLARE-HRIRF-FETSAKSSVNVDEAFSSLARDILLKTGG 175
Query: 72 RQSAT 76
R+S T
Sbjct: 176 RRSGT 180
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +++ V++ A++ + + +I + +ETSAK +TNVE+AF +A ++K+R ++
Sbjct: 123 GNKSDLTNKKVVEYATAKDFADQL-QIPF-LETSAKSATNVEQAFLTMAKQIKDRMGSST 180
Query: 78 CNEPINTDNT 87
N +T
Sbjct: 181 VNNQAGGKST 190
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK D E +R V + EE+ + + I Y+ ETSAK ++NVEEAF+ LA E+K R
Sbjct: 121 GNKSDWEEKRAVTTEQGEELAKELG-IPYI-ETSAKSNSNVEEAFFNLAREVKTR 173
>gi|365758702|gb|EHN00531.1| Ras2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 316
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLA 66
V NK DLE+E++V + + M + + P +ETSAK + NVEEAFY LA
Sbjct: 113 VVGNKSDLENEKQVSYQDGLNMAKQMNAP----FLETSAKQAINVEEAFYTLA 161
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NKCDL S R V +A+E E E + METSA +STNVE AF+ + E+
Sbjct: 127 GNKCDLGSLRAVPTEDAQEFAE--RENLFFMETSALESTNVETAFFTILTEI 176
>gi|395837388|ref|XP_003791617.1| PREDICTED: ras-related protein Rab-19 [Otolemur garnettii]
Length = 217
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKSDLWEKRHVLFEDACTLAEKYGLLA-VLETSAKESKNIDEVFVLMARELIARNSLHL 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
+E + + +S L + S + C+C
Sbjct: 188 FSEGTLGSLPLDSSPVLVAQSPSEKTHCSC 217
>gi|328849799|gb|EGF98973.1| hypothetical protein MELLADRAFT_73486 [Melampsora larici-populina
98AG31]
Length = 213
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V +E E+ H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGAHEGRELAR-----HFGCRFIETSAKQRINVDEAFSSLVKEIRR 173
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL S + V +E + EI +ETSAK+STNVE+AF +A E+K R
Sbjct: 120 GNKSDLTSNKVV---SSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKKR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N P T+ K NC
Sbjct: 173 VASQP--ASNATRPTTVPXRXXXXXQKSNC 200
>gi|354492620|ref|XP_003508445.1| PREDICTED: ras-related protein Rab-31-like [Cricetulus griseus]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 124 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 175
>gi|328876648|gb|EGG25011.1| Ras GTPase [Dictyostelium fasciculatum]
Length = 184
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8 PDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN 67
P S V NKCDLE R+V +AE + + ++ ++ ETSAK N+ +AF L
Sbjct: 107 PVSKIPMIVLGNKCDLEPNRQVSSKDAESLCKKWGDVEFI-ETSAKTKLNISQAFEQLVK 165
Query: 68 ELKNRQSA 75
+++ +Q A
Sbjct: 166 QIRTKQPA 173
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL + VD +A++ + + I ++ ETSAK+S NVEEAF +++E+K R +
Sbjct: 122 GNKCDLVDSKVVDTEKAKDFADSLG-IPFI-ETSAKESINVEEAFLTMSSEIKKRMA 176
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL +++ VD A+E + + I + +ETSAK+STNVEEAF +A ++K+R +A
Sbjct: 120 GNKSDLIAKKAVDPGMAKEFADSLG-IPF-LETSAKNSTNVEEAFIRMATDIKSRVAA 175
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NK DLE ER V EAEE + V +H+ TSAK + NVEE F L +
Sbjct: 120 IAGNKVDLEKERNVTIEEAEEYAKQVGAVHF--HTSAKQNLNVEEMFLDLTRRM 171
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAF 62
NKCDL REV EA + E E + METSAKD+ NVEEAF
Sbjct: 124 GNKCDLHQSREVQEEEARHLAEL--ENLFFMETSAKDNLNVEEAF 166
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NK DL + + V + A+ + EI METSAKD+TNVE+AF +A +K+R
Sbjct: 120 GNKSDLTANKVVSYETAKA---FADEIGIPFMETSAKDATNVEQAFMAMAAAIKDR---- 172
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P N P T+ + + K C
Sbjct: 173 MASQP--AMNNAKPSTVQLRGQPVEQKGGC 200
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCD+ ++ VD + + + EY + +ETSAK+S NVEEAF LA ++K R T
Sbjct: 127 GNKCDMAEKKVVDSSRGKSLADEYGIKF---LETSAKNSINVEEAFISLAKDIKKRMIDT 183
Query: 77 LCNEP 81
+P
Sbjct: 184 PNEQP 188
>gi|440792006|gb|ELR13237.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 232
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V +KCDLE R V +EA+E+ + +ETSAK NV+EAF L ++++ RQ+A
Sbjct: 145 VVGSKCDLEDRRVVHPDEAKELARSFGASY--IETSAKAGINVDEAFIELVHQIQLRQAA 202
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL + VD EA+ E + +ETSAK+S NVE AF +++E+KN+ ++
Sbjct: 121 GNKCDLVDSKVVDTEEAKAFAESLG--MNFLETSAKESINVETAFLTMSSEIKNKMAS 176
>gi|32492048|gb|AAP85296.1| Rab1a [Babesia bovis]
Length = 214
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 PDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN 67
PD H + NK D R+VD +E +E E + YV E SAK +NVEEAF +A
Sbjct: 115 PDGIHKLLI-GNKSDQAQARDVDPSEIQEFSE-LHSTPYV-EISAKSGSNVEEAFVSVAR 171
Query: 68 ELKNRQSATLCNEPINTDNTNSPITLSNDTKSI 100
L + N+P + + PI+L++ KS+
Sbjct: 172 RLVIDRHG---NDPSSNQSIPQPISLNDRVKSV 201
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL + + V + A+ + + I ++ ETSAK+STNVE+AF +A E+KNR ++
Sbjct: 120 GNKSDLTANKVVSYETAKAFADEIG-IPFI-ETSAKNSTNVEQAFMAMAAEIKNRMAS 175
>gi|395539510|ref|XP_003771711.1| PREDICTED: ras-related protein Rab-19 [Sarcophilus harrisii]
Length = 217
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL +R V F +A + E + V+ETSAK+S N++E F +A EL R
Sbjct: 129 GNKADLCDKRHVLFEDACTLAEK-HGLLAVLETSAKESKNIDEVFMLMAKELIARNDLNF 187
Query: 78 CNE-PINTDNTNSPITLSNDTKSIRNKCNC 106
E P N +S L + S +N C+C
Sbjct: 188 YGEGPQNNLLLDSSPILIASSPSSKNHCHC 217
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEP 81
L P
Sbjct: 174 DKKLLEAP 181
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ-SAT 76
NK D+E ++ V++ A+E + + I + +ETSAK+++NVE+AF +A ++K R +AT
Sbjct: 126 GNKSDMEDKKVVEYTVAKEFADSLG-IPF-LETSAKNASNVEQAFLTMARQIKERMGTAT 183
Query: 77 LCNEP 81
+ N+P
Sbjct: 184 VNNKP 188
>gi|769801|emb|CAA54507.1| GTP binding protein [Glycine max]
Length = 155
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R V +E + + E E + METSA DSTNV+ AF + E+ S +
Sbjct: 61 GNKCDLENIRAVSVDEGKSLAE--AEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKV 118
Query: 78 CN 79
N
Sbjct: 119 LN 120
>gi|449543332|gb|EMD34308.1| hypothetical protein CERSUDRAFT_117186 [Ceriporiopsis subvermispora
B]
Length = 204
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
+ NK DL + VD+N A+E + + +I ++ ETSAK+STNVEEAF ++ ++K
Sbjct: 118 LLGNKSDLVERKVVDYNTAKEFADEL-QIPFI-ETSAKNSTNVEEAFVTMSKQIK 170
>gi|324520808|gb|ADY47717.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 219
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DLE +R+VDF+ AE++ + Y E SAK N EEAF LA +++R
Sbjct: 119 GNKADLEDQRKVDFDRAEQLASRLGVSLY--EVSAKTGINCEEAFQNLAAAMRDR 171
>gi|346468105|gb|AEO33897.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 10 SAHDSRVW-SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE 68
S H S++ +K DL +++ VD+N A+ E + I + +ETSAK++ NV +AF +A++
Sbjct: 114 SEHVSKLLVGSKNDLTTDKAVDYNTAKNFAEKLG-IAF-LETSAKNAINVVQAFATMASD 171
Query: 69 LKNRQSATLCNE 80
+K+R ++ NE
Sbjct: 172 IKSRVGXSIANE 183
>gi|326917442|ref|XP_003205008.1| PREDICTED: ras-related protein Rab-31-like [Meleagris gallopavo]
Length = 236
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 157 IAGNKCDLSDIREVPMKDAKEYAESIGAI--VVETSAKNAVNIEELFQGISQQI------ 208
Query: 76 TLCNEPINT--DNTNSPITLSNDTKSIRNKC 104
P++ + N I L T +C
Sbjct: 209 ----PPLDPHENGNNGAIKLGRQTSQTGRRC 235
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + V + A +E+G +P +ETSAKDS NVE+AF +A E+KN+
Sbjct: 121 GNKCDLTDNKLVHTHTAKAFADELG--IP----FLETSAKDSINVEQAFLTMAAEIKNK- 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P + + + + + I+ NC
Sbjct: 174 ---MGSQPTGSKSAAESVQMKG--QPIQQNTNC 201
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL + + V + A+ + + I + METSAK++TNVE+AF +A E+KNR +
Sbjct: 120 GNKNDLTANKVVSYETAKAFADEIG-IPF-METSAKNATNVEQAFMAMAAEIKNR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N P T+ + + K C
Sbjct: 174 ASQP--AMNNARPPTVQIRGQPVNQKSGC 200
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V + E++ I Y +ETSAK S NVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNDKRQVSREKGEKLA-----IDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + NE I+ P+ ++
Sbjct: 173 LNRKM-NESISPGG-GGPVKIT 192
>gi|449266381|gb|EMC77434.1| Ras-related protein Rab-8B, partial [Columba livia]
Length = 170
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 14/78 (17%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++
Sbjct: 81 ILGNKCDMNEKRQV----SKEKGEKLA-IDYGIKFLETSAKSSINVEEAFFTLARDI--- 132
Query: 73 QSATLCNEPINTDNTNSP 90
T N +N DN++S
Sbjct: 133 --MTKLNRKMN-DNSSSG 147
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ R+V + E GE + H + METSA S NVE+AFY LA ++K +
Sbjct: 118 ILGNKCDMNDLRQV----SRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKEK 172
>gi|62901101|sp|Q921E2.1|RAB31_MOUSE RecName: Full=Ras-related protein Rab-31
gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus]
Length = 194
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 115 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 166
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ +R+V + E++ EY + METSAK + NVE +F LA ++K++
Sbjct: 118 ILGNKCDINEKRQVSKDRGEKLALEYGIKF---METSAKANINVENSFLTLARDIKSKMD 174
Query: 75 ATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L + N IT KS +C
Sbjct: 175 TKLEGNNPQSSNHGVKITTEQQKKSSFFRC 204
>gi|225579124|ref|NP_598446.2| ras-related protein Rab-31 [Mus musculus]
gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus]
gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus]
gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus]
Length = 195
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|149723329|ref|XP_001497263.1| PREDICTED: ras-related protein Rab-37-like isoform 2 [Equus
caballus]
Length = 216
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ SER + + E + EY VP METSAK NVE AF +A ELK R
Sbjct: 133 LLGNKADVSSERVIRSEDGEMLAREYGVP----FMETSAKTGMNVELAFLAIAKELKYR- 187
Query: 74 SATLCNEP 81
+ NEP
Sbjct: 188 AGRQANEP 195
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A E E + I V+ETSAK++ NVEE F ++ +
Sbjct: 115 IAGNKCDLSDTREVTMKDAREYAESIGAI--VVETSAKNAINVEELFQGISRRI 166
>gi|66810634|ref|XP_639024.1| Ras GTPase [Dictyostelium discoideum AX4]
gi|417591|sp|P32254.1|RASS_DICDI RecName: Full=Ras-like protein rasS; Flags: Precursor
gi|7345|emb|CAA78508.1| rasS [Dictyostelium discoideum]
gi|60467626|gb|EAL65646.1| Ras GTPase [Dictyostelium discoideum AX4]
Length = 194
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN-RQS 74
+ NKCDL REV E EE+ + + +ETSAK+ NV E+FY L E+K RQS
Sbjct: 113 LVGNKCDLNEYREVSTAEGEELAKKLN--CKFLETSAKERINVSESFYELVREVKKARQS 170
Query: 75 ATLCNEPINTDNTNSPI 91
N NT+ PI
Sbjct: 171 NQHSNS--QEQNTDQPI 185
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Query: 19 NKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A+E + +P +ETSAK++TNVE+AF +A E+K R
Sbjct: 252 NKSDLTTKKVVDNTTAKEFADSLGIP----FLETSAKNATNVEQAFMTMAAEIKKR 303
>gi|344252433|gb|EGW08537.1| Ras-related protein Rab-31 [Cricetulus griseus]
Length = 122
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 43 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 94
>gi|414587347|tpg|DAA37918.1| TPA: hypothetical protein ZEAMMB73_495042 [Zea mays]
Length = 254
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 18 SNKCDLESEREVDFNE-AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS-- 74
NKCDL R VD + AEE+G +P +ETSAK+S NVEEAF ++ +K ++
Sbjct: 178 GNKCDLAENRAVDTSAYAEEVG--IP----FLETSAKESINVEEAFLAMSAAIKKSKAGS 231
Query: 75 -ATLCNEPINT 84
A L +P N
Sbjct: 232 QAALERKPSNV 242
>gi|82541361|ref|XP_724926.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23479748|gb|EAA16491.1| putative GTPase [Plasmodium yoelii yoelii]
Length = 225
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL+++R V + E +E+ E I + +ETSAK S NVE+AF +A E+KN+
Sbjct: 145 GNKIDLKNDRSVSYEEGKELAESC-NIQF-LETSAKISHNVEQAFKTMAYEIKNK 197
>gi|326680391|ref|XP_003201512.1| PREDICTED: ras-related protein Rab-8B-like, partial [Danio rerio]
Length = 165
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++ R
Sbjct: 76 ILGNKCDMNERRQV----SKERGEKLA-IDYGIKFLETSAKTSINVEEAFFTLARDIMAR 130
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + N+ D P+ +S
Sbjct: 131 LNRKM-NDGSQADG-GGPVKIS 150
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V + E++ I Y +ETSAK S NVEEAF+ LA ++ +
Sbjct: 116 ILGNKCDMNDKRQVSREKGEKLA-----IDYGIKFLETSAKSSINVEEAFFTLARDIMTK 170
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + NE I+ P+ ++
Sbjct: 171 LNRKM-NESISPGG-GGPVKIT 190
>gi|330814810|ref|XP_003291423.1| hypothetical protein DICPUDRAFT_57324 [Dictyostelium purpureum]
gi|325078383|gb|EGC32037.1| hypothetical protein DICPUDRAFT_57324 [Dictyostelium purpureum]
Length = 194
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN-RQS 74
+ NKCDL REV E EE+ + + +ETSAK+ NV EAFY L E+K RQS
Sbjct: 113 LVGNKCDLNEYREVSTAEGEELAKKLN--CKFLETSAKERINVTEAFYELVREVKKARQS 170
Query: 75 ATLCNEPINTDNTNSPI 91
+ NT+ PI
Sbjct: 171 N---QHTASESNTDQPI 184
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLE+ R V +E + + E E + METSA DSTNV+ AF + E+ S +
Sbjct: 125 GNKCDLENIRAVSVDEGKSLAE--AEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKV 182
Query: 78 CN-EPINTDNTNSPITLSNDTKS 99
N E + + + ++L N+ S
Sbjct: 183 LNSETYKAELSVNRVSLVNNGAS 205
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCD +R+V + E++ I + METSAK + N+E AF+ LA ++K +
Sbjct: 118 ILGNKCDANDKRQVSREQGEKLAASFG-IKF-METSAKANINIENAFFTLARDIKAKMDK 175
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT KS +C
Sbjct: 176 KLEGNSPQGSNQGVKITPDQQKKSSFFRC 204
>gi|402078717|gb|EJT73982.1| Ras-like protein [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 214
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLE+EREV E E + +ETSAK NV++AFY + E++ NR+
Sbjct: 119 VVGNKCDLEAEREVTRQEGEALARSFN--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 176
Query: 74 SATLCNEPINTDNTNSPI 91
T N PI
Sbjct: 177 MQGYSTGS-GTSNAGGPI 193
>gi|354481757|ref|XP_003503067.1| PREDICTED: ras-related protein Rab-19-like [Cricetulus griseus]
Length = 217
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK +L R V F +A + E + V+ETSAK+S N++E F +A EL R S L
Sbjct: 129 GNKSNLWENRRVLFEDACTLAEKYGLLA-VLETSAKESRNIDEVFVLMAKELIARNSLHL 187
Query: 78 CNEPI--NTDNTNSPITLSNDTKSIRNKCNC 106
E I +SPI ++ + +C C
Sbjct: 188 YGESIQQGLSQDSSPILVAQGPRE-NTRCTC 217
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|417396875|gb|JAA45471.1| Putative gtpase [Desmodus rotundus]
Length = 195
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D+ ++ V++ A+E + + I + +ETSAK++TNVE+AF +A ++K R +T
Sbjct: 120 GNKSDIADKKVVEYTVAKEFADSLG-IPF-LETSAKNATNVEQAFLTMARQIKERMGSTT 177
Query: 78 CN 79
N
Sbjct: 178 VN 179
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL++ REV E + + E E + METSA DSTNV AF + E+ + +
Sbjct: 125 GNKCDLDNIREVPVEEGKALAE--AEGLFFMETSALDSTNVRTAFEIVIKEI----YSNV 178
Query: 78 CNEPINTDNTNSPITL--------SNDTKSIRNKCNC 106
+ +N+D+ + ++L S D + N+ C
Sbjct: 179 SRKILNSDSYKAELSLNRVSIEGDSKDDQKQSNRFGC 215
>gi|440294759|gb|ELP87711.1| ras, putative [Entamoeba invadens IP1]
Length = 192
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DLES+REV +EA + +++ +IH+ ETSAK +TN++E F L +++ ++
Sbjct: 119 GNKSDLESDREVPTDEANRVAQFL-DIHF-FETSAKSNTNIKEMFIGLLQDVQRNKT 173
>gi|344238128|gb|EGV94231.1| Ras-related protein Rab-19 [Cricetulus griseus]
Length = 218
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK +L R V F +A + E + V+ETSAK+S N++E F +A EL R S
Sbjct: 128 IGRNKSNLWENRRVLFEDACTLAEKYGLLA-VLETSAKESRNIDEVFVLMAKELIARNSL 186
Query: 76 TLCNEPI--NTDNTNSPITLSNDTKSIRNKCNC 106
L E I +SPI ++ + +C C
Sbjct: 187 HLYGESIQQGLSQDSSPILVAQGPRE-NTRCTC 218
>gi|117939067|dbj|BAF36687.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 193
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL R+V +A+ + +I + +ETSAK S NV++AF +A E+KNR
Sbjct: 108 LLGNKCDLVERRQVSEADAKRFAT-LQKILF-LETSAKTSQNVDQAFIKMATEIKNR 162
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ ++ VD + + EY I + +ETSAK+S NVEEAF LA ++K R
Sbjct: 128 LIGNKCDMAEKKVVDSARGKSLADEY--GIKF-LETSAKNSINVEEAFISLAKDIKKRMI 184
Query: 75 ATLCNEP 81
T NEP
Sbjct: 185 DT-PNEP 190
>gi|195066090|ref|XP_001996775.1| GH24197 [Drosophila grimshawi]
gi|193892005|gb|EDV90871.1| GH24197 [Drosophila grimshawi]
Length = 220
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+E +R + F ++ + + + ETSAK++ NV+ F L + + ++ S +L
Sbjct: 133 GNKCDMEDQRVISFERGRQLADQLGVEFF--ETSAKENVNVKAVFERLVDIICDKMSESL 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNK-CNC 106
+P T L++ T+ N CNC
Sbjct: 191 DADPTLVGGTQKGQRLTDPTQGTPNANCNC 220
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL+++R V + E +E+ + I + +ETSAK + NVE+AF +A E+KN+
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSC-NIQF-LETSAKIAHNVEQAFKTMAYEIKNKSQ--- 174
Query: 78 CNEPINTDNTN 88
+E IN TN
Sbjct: 175 -HETINKGKTN 184
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKC+L S R+V E++ EY + METSAK S NVEEAF+ LA ++
Sbjct: 118 LLGNKCELNSGRQVSKERGEQLAVEYGIKF---METSAKASVNVEEAFHTLARDI 169
>gi|440302664|gb|ELP94971.1| hypothetical protein EIN_251150 [Entamoeba invadens IP1]
Length = 207
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDLESER+V +EA+++ + + + ETSAK+ N+ E F L ++K A
Sbjct: 125 GNKCDLESERQVQTSEAQKLADDWKVLFF--ETSAKNKINISETFQALVKDIKKNAVAA- 181
Query: 78 CNEPINT 84
P+ T
Sbjct: 182 --APVAT 186
>gi|390473801|ref|XP_002757097.2| PREDICTED: ras-related protein Rab-31-like [Callithrix jacchus]
Length = 200
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 121 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 172
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
+ NKCDL ++ VD G+ + + H + +ETSAK+S NVEEAF LA ++K R
Sbjct: 128 LIGNKCDLPEKKVVD----SSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDIKKR 182
>gi|195383704|ref|XP_002050566.1| GJ20130 [Drosophila virilis]
gi|194145363|gb|EDW61759.1| GJ20130 [Drosophila virilis]
Length = 220
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+E +R + F ++ + + + ETSAK++ NV+ F L + + ++ S +L
Sbjct: 133 GNKCDMEDQRVISFERGRQLADQLGVEFF--ETSAKENVNVKAVFERLVDIICDKMSESL 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNK-CNC 106
+P T L++ T+ N CNC
Sbjct: 191 DADPTLVGGTQKGQRLTDPTQGTPNTNCNC 220
>gi|449281960|gb|EMC88901.1| Ras-related protein Rab-8A, partial [Columba livia]
Length = 166
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCD +R+V + E++ I + METSAK + N+E AF+ LA ++K +
Sbjct: 77 ILGNKCDANDKRQVSREQGEKLAASFG-IKF-METSAKANINIENAFFTLARDIKAKMDK 134
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT KS +C
Sbjct: 135 KLEGNSPQGSNQGVKITPDQQKKSSFFRC 163
>gi|402224518|gb|EJU04580.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 246
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ +NKCDLE ER+V +E ++ + +E+SAK NV+EAF L E++ Q
Sbjct: 117 IVANKCDLEYERQVGGHEGRDLARHFGAP--FIESSAKHRVNVDEAFTALVREIRKYQ 172
>gi|340507940|gb|EGR33774.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 234
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 4 FVGWPDSAHDS-------RVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDST 56
V W + A ++ + NKCDLE++R+V + E +E+ ++ Y+ ETSAK
Sbjct: 111 IVNWLNEARENGNSQMVYMLIGNKCDLETQRQVSYEEGKELA-LSNDMLYI-ETSAKTQQ 168
Query: 57 NVEEAFYCLANELKNRQSATLCNEPINTDNTNSPITLSNDTK 98
NVE+ F Q+A L E I N + P L+N K
Sbjct: 169 NVEQVF---------SQTAYLILEKIQNGNID-PTNLNNGIK 200
>gi|444727864|gb|ELW68342.1| Ras-related protein Rab-37 [Tupaia chinensis]
Length = 293
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ SER + + E + EY VP METSAK NVE AF +A ELK R
Sbjct: 210 LLGNKADVSSERVIRSEDGEMLAREYGVP----FMETSAKTGMNVELAFLAIAKELKYR- 264
Query: 74 SATLCNEP 81
+ NEP
Sbjct: 265 AGRQANEP 272
>gi|443915634|gb|ELU37010.1| small GTP-binding protein [Rhizoctonia solani AG-1 IA]
Length = 404
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL S++ V++ A+E + + I + +ETSAK++TNVE+AF +A ++K+R +
Sbjct: 167 NKSDLTSKKVVEYTVAKEFADQL-SIPF-LETSAKNATNVEQAFLTMAKQIKDRMGS 221
>gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus]
Length = 195
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ E METSAK S NV E F +A +L
Sbjct: 132 GNKADLANKRAVDFQEAQSYAE--DNSLLFMETSAKTSMNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP N ++ + L+ T+ R++C
Sbjct: 184 -NEPQNPGANSARGRGVDLTEPTQPTRSQC 212
>gi|327281988|ref|XP_003225727.1| PREDICTED: ras-related protein Rab-31-like [Anolis carolinensis]
Length = 196
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 117 IAGNKCDLSDIREVPTKDAKEYAETIGAI--VVETSAKNAINIEELFQGISRQI------ 168
Query: 76 TLCNEPINT-DNTNSP-ITLSNDTKSIRNKC 104
P+ T +N NS I L T + +C
Sbjct: 169 ----PPLETHENGNSGTIKLGKQTTQMTRRC 195
>gi|383858269|ref|XP_003704624.1| PREDICTED: ras-related protein Rab-21-like [Megachile rotundata]
Length = 222
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NK DLE R V EAEE + V +HY TSAK S N+EE F L +
Sbjct: 123 IAGNKIDLEKNRSVSIQEAEEYAKQVGAMHY--HTSAKLSQNIEEMFVDLTQRM 174
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V +A+++ EY + ETSAKD NVEEAF LA ++K +
Sbjct: 118 ILGNKCDVVDKRQVSKEQAQQLAAEYGVKFS---ETSAKDGHNVEEAFMTLAKDIKAK 172
>gi|432895843|ref|XP_004076189.1| PREDICTED: ras-related protein Rab-39B-like [Oryzias latipes]
Length = 213
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 18 SNKCDLESEREVDFNEAEEM-GEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+KCDLE++R+V +EAE++ G Y + YV ETSA+D+ NVE+AF L ++
Sbjct: 122 GHKCDLEAQRQVTQHEAEKLAGAY--GMRYV-ETSARDAINVEKAFVDLTRDI 171
>gi|431896339|gb|ELK05755.1| Ras-related protein Rab-31 [Pteropus alecto]
Length = 215
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 136 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 187
>gi|448089507|ref|XP_004196824.1| Piso0_004050 [Millerozyma farinosa CBS 7064]
gi|448093784|ref|XP_004197855.1| Piso0_004050 [Millerozyma farinosa CBS 7064]
gi|359378246|emb|CCE84505.1| Piso0_004050 [Millerozyma farinosa CBS 7064]
gi|359379277|emb|CCE83474.1| Piso0_004050 [Millerozyma farinosa CBS 7064]
Length = 246
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
V NKCDLE ER+V + E + + +ETSAK NVEEAFY L +++
Sbjct: 114 VVGNKCDLEMERQVSYEEGLSLAKSFD--CKFLETSAKQRINVEEAFYGLVRSIRD 167
>gi|355567795|gb|EHH24136.1| hypothetical protein EGK_07736 [Macaca mulatta]
Length = 122
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 11/76 (14%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPE--IHYVMETSAKDSTNVEEAFYCLANEL---- 69
+ NKCD+E++R+V +A+++ PE I + ETSAK S NV+EAF LA ++
Sbjct: 37 LLGNKCDMEAKRKVQKEQADKL---APEQGIRF-FETSAKSSMNVDEAFSSLAQDILLKS 92
Query: 70 KNRQSATLCNEPINTD 85
+R+S N+P +TD
Sbjct: 93 GDRRSGN-GNKPPSTD 107
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL ++ V + A+ + + I + METSAK++ NVE+AF ++ +K+R +
Sbjct: 120 GNKCDLTDKKVVSYETAKAFADEIG-IPF-METSAKNALNVEQAFMAMSASIKDR----M 173
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P N+ P T+ + + K +C
Sbjct: 174 ASQP--AANSARPATVQIRGQPVEQKTSC 200
>gi|283975465|gb|ADB55717.1| 24 kDa RAS-like protein [Pseudozyma flocculosa]
Length = 167
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V +E E+ + H+ +ETSAK NV+EAF L E++
Sbjct: 71 VVANKCDLEYERQVGSHEGRELAK-----HFGCRFIETSAKQRINVDEAFSNLVREIRR 124
>gi|393909789|gb|EFO19133.2| RAL-1 protein [Loa loa]
Length = 289
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 9 DSAHDSRV----WSNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAF 62
+SA DS + NK DL +ER V A++ E VP I ETSAK+ TNV++ F
Sbjct: 195 NSAMDSSIPIILVGNKSDLTNERSVMQLHAQQRAEQWNVPYI----ETSAKNRTNVDKVF 250
Query: 63 YCLANELKNRQSATL 77
Y L E+K R+ TL
Sbjct: 251 YDLMREIKRRKGGTL 265
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NK DL+ +R V+++ A+E E +P +ETSA DSTNVEEAF +A ++K
Sbjct: 120 GNKSDLKDKRIVEYDVAKEFAETNNMP----FLETSALDSTNVEEAFLTMAKQIK 170
>gi|338728025|ref|XP_001489577.2| PREDICTED: ras-related protein Rab-31-like [Equus caballus]
Length = 195
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT + +S +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDHQKRSSFFRC 204
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL++ REV E + + E E + METSA D+TNV AF + E+ +++
Sbjct: 125 GNKCDLDNIREVPVEEGKALAE--AEGLFFMETSALDATNVRTAFEIVIREI----YSSV 178
Query: 78 CNEPINTDNTNSPITL 93
+ +N+D+ + ++L
Sbjct: 179 SRKILNSDSYKAELSL 194
>gi|432095538|gb|ELK26690.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 224
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 135 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 190
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT K+ +C
Sbjct: 191 DKKLEGNSPQGSNQGVKITPDQQKKTSFFRC 221
>gi|242018600|ref|XP_002429762.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514774|gb|EEB17024.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 210
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+LE +R+V + E++ EY I ++ ETSAK S +V++AFY LA ++K +
Sbjct: 120 LLGNKCELEEKRQVTKEKGEQLAIEY--GIKFI-ETSAKASIHVQDAFYMLARDIKAKTE 176
Query: 75 ATL 77
L
Sbjct: 177 KKL 179
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLA-----NELKNR 72
NK DL S+R VDF EA+ + METSAK + NV E F +A NE +N
Sbjct: 133 GNKADLSSKRAVDFQEAQAYAD--DNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNA 190
Query: 73 QSATLCNEPINTDNTNSP 90
Q T N ++ N P
Sbjct: 191 QGNTGRNRGVDLQENNPP 208
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK D E +R V + EE+ + I Y+ ETSAK + NVEEAF+ LA E+K R
Sbjct: 121 GNKSDWEEKRAVSTEQGEELARELG-IPYI-ETSAKSNANVEEAFFNLAREVKTR 173
>gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct]
gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct]
gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 115 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 166
>gi|33589861|ref|NP_006859.2| ras-related protein Rab-31 [Homo sapiens]
gi|332849489|ref|XP_523865.3| PREDICTED: uncharacterized protein LOC468476 isoform 2 [Pan
troglodytes]
gi|426385456|ref|XP_004059230.1| PREDICTED: ras-related protein Rab-31 [Gorilla gorilla gorilla]
gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens]
gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct]
gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct]
gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct]
gi|410217198|gb|JAA05818.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410266338|gb|JAA21135.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308006|gb|JAA32603.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308008|gb|JAA32604.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308010|gb|JAA32605.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352351|gb|JAA42779.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352353|gb|JAA42780.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352355|gb|JAA42781.1| RAB31, member RAS oncogene family [Pan troglodytes]
Length = 195
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK D E +R V + EE+ + I Y+ ETSAK + NVEEAF+ LA E+K R
Sbjct: 121 GNKSDWEEKRAVTTEQGEELARELG-IPYI-ETSAKSNANVEEAFFHLAREVKTR 173
>gi|156838788|ref|XP_001643093.1| hypothetical protein Kpol_1029p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156113686|gb|EDO15235.1| hypothetical protein Kpol_1029p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 305
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYV--PEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
V NK DLE+ER+V + E + + + P +ETSAK NV++AFY LA +++
Sbjct: 120 VVGNKSDLETERQVSYEEGMSLAKQMNAP----FLETSAKQDINVQDAFYNLARLVRDEG 175
Query: 74 S-------ATLCNEPINTD 85
+T+ EPI+++
Sbjct: 176 GRYNAQLMSTINGEPISSN 194
>gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp
Analogue
Length = 192
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 133 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 184
>gi|257222596|gb|ACV52576.1| ras-related GTP-binding protein [Nicotiana benthamiana]
Length = 131
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK DL + R V + A+ + + I + +ETSAKD+TNVE+AF + + +KNR ++
Sbjct: 74 GNKSDLTANRVVSYETAKAFADEIG-IPF-LETSAKDATNVEQAFMAMTSAIKNRMAS 129
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 118 LLGNKCELHDKRQVSKERGEQLAIEYGIKF---METSAKASINVEEAFLTLASDIKAK 172
>gi|1457954|gb|AAC50773.1| Rab22b [Homo sapiens]
Length = 194
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 115 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 166
>gi|355714893|gb|AES05152.1| RAB31, member RAS oncoprotein family [Mustela putorius furo]
Length = 194
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ RQ
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGIS-----RQIP 168
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L +P + + N I L T +C
Sbjct: 169 PL--DP-HENGNNGAIKLGKQTTQAGRRC 194
>gi|302666103|ref|XP_003024654.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
gi|291188720|gb|EFE44043.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
Length = 1174
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 19 NKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCD E +R V + +++ +P +E SAK++ NV++AFY LA E+K +
Sbjct: 1091 NKCDGEEKRAVTVEQGQQLANELGIP----FLEVSAKNNINVDKAFYSLATEIKKDMDVS 1146
Query: 77 LCNEP----INTDNTN 88
+ +N DN N
Sbjct: 1147 KAEQAGSQGVNIDNQN 1162
>gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens]
Length = 195
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 115 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 166
>gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 196
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 167
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT +S +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDQQKRSSFFRC 204
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT +S +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDQQKRSSFFRC 204
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NKCDL +R V+++ A+E + +P +ETSA +STNVEEAF +A ++K S
Sbjct: 120 GNKCDLTDKRVVEYDVAKEFADANKMP----FLETSALNSTNVEEAFLTMARQIKESMS 174
>gi|2500069|sp|Q13636.1|RAB31_HUMAN RecName: Full=Ras-related protein Rab-31; AltName: Full=Ras-related
protein Rab-22B
gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens]
gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens]
gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens]
gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens]
gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct]
gi|189054712|dbj|BAG37334.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 115 IAGNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 166
>gi|449470924|ref|XP_002193872.2| PREDICTED: ras-related protein Rab-8B [Taeniopygia guttata]
Length = 120
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 14/78 (17%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA R
Sbjct: 37 ILGNKCDMNEKRQV----SKEKGEKLA-IDYGIKFLETSAKSSINVEEAFFTLA-----R 86
Query: 73 QSATLCNEPINTDNTNSP 90
T N +N DN++S
Sbjct: 87 DIMTKLNRKMN-DNSSSG 103
>gi|345493693|ref|XP_001600302.2| PREDICTED: ras-related protein Rab-26-like [Nasonia vitripennis]
Length = 283
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD SER V + + + EY VP METSAK NVE AF+ +A ELK R
Sbjct: 191 LLGNKCDCGSERIVRREDGQRLANEYKVP----FMETSAKTGLNVELAFHAVARELKAR 245
>gi|324509113|gb|ADY43839.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 155
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DLE +R+VDF+ AE++ + Y E SAK N EEAF LA +++R
Sbjct: 55 GNKADLEDQRKVDFDRAEQLASRLGVSLY--EVSAKTGINCEEAFQNLAAAMRDR 107
>gi|392579564|gb|EIW72691.1| hypothetical protein TREMEDRAFT_58860 [Tremella mesenterica DSM
1558]
Length = 208
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD + +R V + + + + +ETSAK + VEEAF+ LA ++K R +
Sbjct: 121 GNKCDWDDKRAVSLEQGKALADEFG--LRFLETSAKANEGVEEAFFTLARDIKTR---LI 175
Query: 78 CNEPINTDNTNSPITLSNDTKSI 100
++P +P++L+ D K +
Sbjct: 176 DSQP----EAAAPVSLAADRKGV 194
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCD+E++R+V A+++ I + ETSAK STNV+EAF LA ++ ++ A
Sbjct: 118 LLGNKCDMEAKRKVQKERADKLARE-HGIRF-FETSAKSSTNVDEAFSSLARDILHKSGA 175
>gi|357445239|ref|XP_003592897.1| Ras-like protein [Medicago truncatula]
gi|355481945|gb|AES63148.1| Ras-like protein [Medicago truncatula]
Length = 163
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 16/93 (17%)
Query: 18 SNKCDLESEREVDFNEA----EEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + V + A +E+G +P +ETSAKDS NVE+AF +A E+KN+
Sbjct: 81 GNKCDLTDNKLVHTHTAKAFADELG--IP----FLETSAKDSINVEQAFLTMAAEIKNK- 133
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+ ++P + + + + + I+ NC
Sbjct: 134 ---MGSQPTGSKSAAESVQMKG--QPIQQNTNC 161
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD A EY ++ +ETSAK +TNVE+AF +A E+KNR
Sbjct: 123 GNKSDLTTKKVVDHTTA---AEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNR 175
>gi|117939081|dbj|BAF36694.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 2 YIFVGWPDSAHDS--RVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVE 59
++F G P + + NK DLE R V +AE +I Y ETSAKD++NVE
Sbjct: 97 FLFQGSPQDPDNFPFMLLGNKIDLEESRVVQAKKAENWCHQKGDIKY-FETSAKDNSNVE 155
Query: 60 EAFYCLANELKNRQSATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
+AF +A L E D S I + ++++ ++KC C
Sbjct: 156 QAFLEIAR-------IGLSREVQEDDIPTSSIVVQDESQKPKSKCPC 195
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 132 GNKADLANKRAVDFQEAQAYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP NT +++ + L+ T+ +++C
Sbjct: 184 -NEPQNTGASSARGRGVDLTEPTQPPKSQC 212
>gi|68065164|ref|XP_674566.1| GTPase [Plasmodium berghei strain ANKA]
gi|56493223|emb|CAH95602.1| GTPase, putative [Plasmodium berghei]
Length = 150
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL+++R V + E +E+ E I + +ETSAK S NVE+AF +A E+KN+
Sbjct: 70 GNKIDLKNDRSVSYEEGKELAESC-NIQF-LETSAKISHNVEQAFKTMAYEIKNK 122
>gi|29467612|dbj|BAC67198.1| ras protein [Fusarium oxysporum]
gi|342884586|gb|EGU84793.1| hypothetical protein FOXB_04688 [Fusarium oxysporum Fo5176]
Length = 216
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDLE +R+V E E + +ETSAK NV++AFY + E++ NR+
Sbjct: 120 VVGNKCDLEGDRDVSRQEGEALARSFG--CKFIETSAKSRINVDKAFYDIVREIRRYNRE 177
Query: 74 SATLCNEPINTDNTNSP 90
T N P
Sbjct: 178 MQGYSTGSGGTSGANGP 194
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 7 WPDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLA 66
+ D + + + NK DLES R+V EA ++ E E + +ETSA DSTNV AF +
Sbjct: 113 YSDFSLVTMLVGNKSDLESLRQVSIEEATDLAE--REGLFFIETSALDSTNVAAAFETVI 170
Query: 67 NELKNRQSATLCNEPINTDNTNSPITLSNDTK 98
E+ + ++ I + +++ TLS K
Sbjct: 171 KEIFG-----MVSKKILSSDSSKAGTLSGTKK 197
>gi|166240332|ref|XP_001134534.2| Rab GTPase [Dictyostelium discoideum AX4]
gi|187611437|sp|Q1ZXE7.2|RABZ_DICDI RecName: Full=Ras-related protein RabZ
gi|165988545|gb|EAS66851.2| Rab GTPase [Dictyostelium discoideum AX4]
Length = 229
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ +NKCDL +R V+FN A++ + +P ++E SAK+S VEEAF LA+E+
Sbjct: 161 IIANKCDLNEKRVVNFNNAKKFADDKNIP----IIEVSAKESLGVEEAFIKLASEI 212
>gi|332253739|ref|XP_003275989.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8A
[Nomascus leucogenys]
Length = 207
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT +S +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDQQKRSSFFRC 204
>gi|403415589|emb|CCM02289.1| predicted protein [Fibroporia radiculosa]
Length = 215
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
V +NK DLE ER+V NE ++ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKSDLEYERQVGMNEGRDLAK-----HFGCKFIETSAKQRINVDEAFSSLVREIRRH 173
Query: 73 QSATLCNEPINTDNTNSPITLSNDTKS 99
P N S + + +K
Sbjct: 174 NKEQQTGRPGAPPNMPSGPGVYSSSKG 200
>gi|349579968|dbj|GAA25129.1| K7_Ypt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN---ELKNR 72
+ NK DL ER++ E E+ E + METS K NV+ F +A E +N
Sbjct: 121 IVGNKSDLSDERQISTEEGEKKAELLGA-KIFMETSTKAGYNVKALFKKIAKSLPEFQNS 179
Query: 73 QSATLCNEPINTDNTNSP--ITLSNDTKSIRNKCNC 106
+S L NE N+ N N P I +S + ++ C C
Sbjct: 180 ESTPLDNENANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCD E +R V +++ + +P ME SAK + NVE+AF+ LA ++K R
Sbjct: 122 GNKCDWEEKRVVSTERGQQLADELGIP----FMEVSAKSNINVEKAFFSLATDIKKRIMD 177
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
T E S + S D+ ++ KC
Sbjct: 178 TARAEE-KAGGQGSVVDPSRDSGNMSGKC 205
>gi|432094470|gb|ELK26033.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 207
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT K+ +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDQQKKTSFFRC 204
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ +R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 118 ILGNKCDVNDKRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT K+ +C
Sbjct: 174 DKKLEGNSPQGSNQGVKITPDQQKKTSFFRC 204
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 7 WPDSAHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLA 66
+ D + + + NK DLES R+V EA ++ E E + +ETSA DSTNV AF +
Sbjct: 113 YSDFSLVTMLVGNKSDLESLRQVSIEEATDLAE--REGLFFIETSALDSTNVAAAFETVI 170
Query: 67 NELKNRQSATLCNEPINTDNTNSPITLSNDTK 98
E+ + ++ I + +++ TLS K
Sbjct: 171 KEIFG-----MVSKKILSSDSSKARTLSGTKK 197
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD+ A+E Y ++ +ETSAK++ NVE+AF +A E+K+R
Sbjct: 123 GNKSDLHTKKVVDYTTAKE---YADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSR 175
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ VD+ A+E + +P +ETSAK++ NVE+AF +A ++K R +
Sbjct: 120 GNKSDMSEKKVVDYQVAKEFADSLGIP----FLETSAKNANNVEQAFLTMARQIKERMGS 175
Query: 76 TLCN 79
T N
Sbjct: 176 TATN 179
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ VD+ A+E + +P +ETSAK+++NVE+AF +A ++K R
Sbjct: 145 GNKSDMSDKKVVDYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERIGT 200
Query: 76 TLCN 79
T N
Sbjct: 201 TTAN 204
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++ V++ A++ + + I + +ETSAK+STNVE+AF +A ++K+R +
Sbjct: 120 GNKSDLTQKKVVEYTVAKDFADQL-SIPF-LETSAKNSTNVEQAFLTMAKQIKDRTGSA- 176
Query: 78 CNEPINTDNTNSPITLSN 95
P+N + + + + +
Sbjct: 177 ---PVNATSNKATLKVGS 191
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL-KNRQSAT 76
NK DL+S+R V EA+ + + METSA DSTNVE AF+ + + K S
Sbjct: 122 GNKSDLQSQRTVPTEEAQHFAD--EKGLMFMETSALDSTNVESAFHEVLTAIHKKVASRE 179
Query: 77 LCNEPINTDNTNSPITLSNDTKSIRNKC 104
+ I+ + PI L+++ + R C
Sbjct: 180 VTRGSISAVTLSGPIGLNSEQQEERKGC 207
>gi|410977346|ref|XP_003995067.1| PREDICTED: ras-related protein Rab-31 [Felis catus]
Length = 217
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 138 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGISRQI 189
>gi|403265333|ref|XP_003924897.1| PREDICTED: ras-related protein Rab-31 [Saimiri boliviensis
boliviensis]
Length = 191
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 114 GNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 163
>gi|326934562|ref|XP_003213357.1| PREDICTED: ras-related protein Rab-8A-like [Meleagris gallopavo]
Length = 123
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCD +R+V + E++ I + METSAK + N+E AF+ LA ++K +
Sbjct: 34 ILGNKCDANDKRQVSREQGEKLAASFG-IKF-METSAKANINIENAFFTLARDIKAKMDK 91
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT KS +C
Sbjct: 92 KLEGNSPQGSNQGVKITPDQQKKSSFFRC 120
>gi|449475888|ref|XP_002187185.2| PREDICTED: ras-related protein Rab-26 [Taeniopygia guttata]
Length = 190
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D +R V + E++ EY VP METSAK NVE AF +A ELK+R
Sbjct: 108 LLGNKVDSAQDRVVKREDGEKLAKEYGVP----FMETSAKSGLNVELAFTAIAKELKHR- 162
Query: 74 SATLCNEP 81
S L NEP
Sbjct: 163 SMKLPNEP 170
>gi|255966060|gb|ACU45315.1| ras [Rhodomonas sp. CCMP768]
Length = 187
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
+ NKCDLE ER+V E +++ + + ETSAK NVEEAFY L E++
Sbjct: 113 LAGNKCDLEDERQVTTAEGQDLAKSFACPFF--ETSAKSRINVEEAFYDLVREIRK 166
>gi|47211718|emb|CAF95873.1| unnamed protein product [Tetraodon nigroviridis]
Length = 182
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL+++R+V F +A + E + V+ETSAK++ NVE AF +A EL R
Sbjct: 127 GNKSDLQAQRQVLFEDACTLAES-NGVLAVLETSAKEAQNVEAAFTLMARELLAR 180
>gi|444315760|ref|XP_004178537.1| hypothetical protein TBLA_0B01750 [Tetrapisispora blattae CBS 6284]
gi|387511577|emb|CCH59018.1| hypothetical protein TBLA_0B01750 [Tetrapisispora blattae CBS 6284]
Length = 373
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLA 66
V NK DLE ER+V F E M + + +ETSAK++ NVE+AFY L
Sbjct: 120 VVGNKSDLEIERQVTFEEGMTMAKQMNSP--FLETSAKEAINVEDAFYNLV 168
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNR 72
NK DL +++ VD+ A+E Y ++ +ETSAK++ NVE+AF +A E+K+R
Sbjct: 119 GNKSDLHTKKVVDYTTAKE---YADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSR 171
>gi|254578746|ref|XP_002495359.1| ZYRO0B09438p [Zygosaccharomyces rouxii]
gi|238938249|emb|CAR26426.1| ZYRO0B09438p [Zygosaccharomyces rouxii]
Length = 298
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NK DL+ ER+V + + M + + +ETSAK + NVEEAFY L +++ A
Sbjct: 120 VVGNKSDLDEERQVSYEDGLHMAQQMSAP--FLETSAKQAINVEEAFYTLVRLVRDDGGA 177
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL ++R VDF EA+ + METSAK S NV E F +A +L
Sbjct: 132 GNKADLANKRAVDFQEAQSYAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPK------ 183
Query: 78 CNEPINTDNTNS---PITLSNDTKSIRNKC 104
NEP N ++ + L+ T+ R++C
Sbjct: 184 -NEPQNPGGNSARGRGVDLTEPTQPTRSQC 212
>gi|158343283|gb|ABW35314.1| Rab1D [Karlodinium micrum]
Length = 263
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NKCD + REV F EAE + Y ETSAKD NV+EAF L + L
Sbjct: 120 GNKCDNSARREVLFEEAESFATSHGMLFY--ETSAKDDVNVQEAFLALVSAL 169
>gi|348518962|ref|XP_003447000.1| PREDICTED: ras-related protein Rab-39B-like [Oreochromis niloticus]
Length = 213
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Query: 18 SNKCDLESEREVDFNEAEEM-GEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+KCDLE++R+V EAE++ G Y + YV ETSA+D+ NVE+AF L ++
Sbjct: 122 GHKCDLEAQRQVTQQEAEKLAGAY--GMRYV-ETSARDAINVEKAFVDLTKDI 171
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++ R
Sbjct: 118 ILGNKCDMNERRQV----SKERGEKLA-IDYGIKFLETSAKTSINVEEAFFTLARDIMAR 172
>gi|158634606|gb|ABW76149.1| Rab3 [Aiptasia pulchella]
Length = 221
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+E ER V F+ +++ + + + ETSAK +TNV++ F L + + ++ S +L
Sbjct: 133 GNKCDMEDERVVSFDRGKQLADQLGLEFF--ETSAKGNTNVKQVFERLVDIICDKMSESL 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++P T + +N+ NC
Sbjct: 191 DSDPTIISGQKPGTTKLTSERPQQNQDNC 219
>gi|195998762|ref|XP_002109249.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190587373|gb|EDV27415.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 217
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL-KNRQSAT 76
NKCDL+S+R+V + EA++ + ++ +E SAK NVEEAF A ++ +N Q +
Sbjct: 124 GNKCDLDSQRDVTYEEAKQFADENGLLY--LEASAKTGENVEEAFLDTAKKIYQNIQDGS 181
Query: 77 L---------CNEPINTDNTNSPITLSNDTKSIRNKCNC 106
L ++P N+ T T++ D +KC C
Sbjct: 182 LDLNAAESGVQHKPTNSRGTT---TITTDQPVNESKCAC 217
>gi|730474|sp|P38976.1|RAS2_HYDVU RecName: Full=Ras-like protein RAS2; Flags: Precursor
gi|11140|emb|CAA50187.1| RAS2 protein [Hydra vulgaris]
gi|1586547|prf||2204244A ras 2 gene
Length = 192
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DLE+ER V EA+E+G + ++ Y +E+SAK NV+ AF+ L ++N A
Sbjct: 118 LVGNKSDLENERTVSTAEAQELGRKL-KVSY-LESSAKQRINVDAAFHDLVRAIRNANKA 175
Query: 76 TLCNEPIN 83
++ EP+
Sbjct: 176 SV--EPLR 181
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCD E +R V + A+E+G +P ME SAK + NVE+AFY LA ++K R
Sbjct: 122 GNKCDWEEKRAVSTEQGQALADELG--IP----FMEVSAKSNINVEKAFYSLAGDIKKRI 175
Query: 74 SAT 76
+ T
Sbjct: 176 ADT 178
>gi|449665002|ref|XP_002154751.2| PREDICTED: RAS2 protein [Hydra magnipapillata]
Length = 192
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NK DLE+ER V EA+E+G + ++ Y +E+SAK NV+ AF+ L ++N A
Sbjct: 118 LVGNKSDLENERTVSTAEAQELGRKL-KVSY-LESSAKQRINVDAAFHDLVRAIRNANKA 175
Query: 76 TLCNEPIN 83
++ EP+
Sbjct: 176 SV--EPLR 181
>gi|432868521|ref|XP_004071579.1| PREDICTED: ras-related protein Rab-37-like [Oryzias latipes]
Length = 229
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGE--YVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ +ER V E E++ + +P METSAK N+E AF+ +A ELK+R
Sbjct: 146 LLGNKSDMAAERVVKTEEGEKLAKECGIP----FMETSAKTGVNIELAFHAVAKELKHRA 201
Query: 74 S 74
+
Sbjct: 202 T 202
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
NKCDL + + V + A+E+G +P METSAK++TNV AF +A ++KNR
Sbjct: 157 GNKCDLTANKVVSYETGKAFADEIG--IP----FMETSAKNATNVXHAFMAMAADIKNRM 210
Query: 74 SA 75
++
Sbjct: 211 AS 212
>gi|126326678|ref|XP_001371437.1| PREDICTED: ras-related protein Rab-39A-like [Monodelphis domestica]
Length = 217
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+KCDL S+R+V EAE+M + Y+ ETSAKD+TNVEE+F L ++
Sbjct: 126 GHKCDLVSQRQVSREEAEKMSAACG-MKYI-ETSAKDATNVEESFTILTRDI 175
>gi|440297867|gb|ELP90508.1| hypothetical protein EIN_018670 [Entamoeba invadens IP1]
Length = 206
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKN 71
NKCDLESER+V EA+++ + + + ETSAK+ N+ E F L ++K
Sbjct: 122 GNKCDLESERQVQTTEAKKLADDWKVLFF--ETSAKNKINISETFVALVKDIKQ 173
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE+ R+V+F EA + E +H METSAK + NV++ F +A L
Sbjct: 121 GNKADLEARRKVEFEEAHQYAEDNDILH--METSAKTAVNVKDLFVAIAKRLP------- 171
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
P + PIT +KS C
Sbjct: 172 -KNPPQPEREAFPITPPQASKSKSGCC 197
>gi|327265053|ref|XP_003217323.1| PREDICTED: ras-related protein Rab-37-like [Anolis carolinensis]
Length = 232
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NK D+ SER V + E + EY VP METSAK NVE AF +A ELK R
Sbjct: 149 LLGNKADVSSERVVRTEDGEALAREYGVP----FMETSAKTGMNVELAFLAIAKELKQR 203
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ V++ A+E + +P +ETSAK +TNVE+AF +A ++K R
Sbjct: 124 GNKSDMADKKVVEYTVAKEFADSLGIP----FLETSAKSATNVEQAFLTMARQIKERMGT 179
Query: 76 TLCN 79
T N
Sbjct: 180 TTAN 183
>gi|426254027|ref|XP_004020688.1| PREDICTED: ras-related protein Rab-31 [Ovis aries]
Length = 252
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ RQ
Sbjct: 173 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGIS-----RQIP 225
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L +P N+ S I L T +C
Sbjct: 226 PL--DPHENGNSGS-IKLVKPTSQAGRRC 251
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 118 LLGNKCELTDKRQVSKERGEQLAIEYGIKF---METSAKASINVEEAFLTLASDIKAKTE 174
Query: 75 ATL-CNEPINTDNTNSPI 91
+ N P + P+
Sbjct: 175 KRMEANNPPKGGHQLKPM 192
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANEL 69
+ NKCD+ R+V + E++ I Y METSAK NVEEAFY +A ++
Sbjct: 118 ILGNKCDMTDRRQVSKDRGEKLA-----IDYGVKFMETSAKSGLNVEEAFYTMARDI 169
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKCD+ +R+V + E++ EY + METSAK + NVE AF LA ++K +
Sbjct: 118 ILGNKCDINEKRQVSKDRGEKLALEYGIKF---METSAKANINVENAFLTLARDIKAKMD 174
Query: 75 ATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L N IT KS +C
Sbjct: 175 TKLEGNNPQGSNHGVKITTEQPKKSSFFRC 204
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+E +R + + E GE V H + METSAK + N+E AF LA + N+Q
Sbjct: 119 ILGNKCDMEDKRLI----SRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQ 174
Query: 74 SA 75
A
Sbjct: 175 MA 176
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 8 PDSAHDSRVWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLA 66
D A + + NKCD++ +REV E + EY + ETSAK+ NVE+ F +A
Sbjct: 113 ADVAVNKILIGNKCDMDEDREVSKEEGANLAAEYGIQF---FETSAKNDINVEKGFITIA 169
Query: 67 NELKNRQSA 75
E+K+R A
Sbjct: 170 REVKDRLMA 178
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
NK DL+ +R V+++ A+E + + +I + +ETSA DS+NVEEAF +A ++K
Sbjct: 120 GNKSDLQDKRMVEYDVAKEFADSL-QIPF-LETSALDSSNVEEAFLTMAKQIK 170
>gi|358255043|dbj|GAA56735.1| Ras-related protein RABA1e [Clonorchis sinensis]
Length = 175
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL R V ++A E E + METSA D+TNV+EAF + +E+ + ++
Sbjct: 87 GNKCDLRYLRSVVTDDAREFAR--RESLFFMETSALDATNVDEAFRQIISEIFKQVNSHP 144
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNK--CNC 106
I + +P+ +S + +RNK C C
Sbjct: 145 HLFSIPSLPKQTPVKISTE---VRNKRPCGC 172
>gi|358057810|dbj|GAA96312.1| hypothetical protein E5Q_02978 [Mixia osmundae IAM 14324]
Length = 264
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCD ++ + + E+ + + + Y +ETSAK + NVEEAF+ LA E+KNR
Sbjct: 156 GNKCDWTEKKVITEQQGRELADELG-VGY-LETSAKTNINVEEAFFTLAREVKNR 208
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+E +R + + E GE V H + METSAK + N+E AF LA + N+Q
Sbjct: 119 ILGNKCDMEDKRLI----SRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQ 174
Query: 74 SA 75
A
Sbjct: 175 MA 176
>gi|298706041|emb|CBJ29151.1| Rab8D, RAB family GTPase [Ectocarpus siliculosus]
Length = 223
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 11 AHDSRVWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
D + NKCDL+ REV E E++ + + Y METSAK++ NVEE F LA+ +K
Sbjct: 124 GSDVVICGNKCDLQG-REVAREEGEQLAAELG-VPY-METSAKENLNVEETFGNLASRVK 180
Query: 71 NR----QSATLCNEPINTDNTNSPITLSNDTKSIRNK 103
R Q+AT T N DT+S+ +
Sbjct: 181 TRLEASQAATDGAGAGETLRLNGGRNGGVDTESLTQR 217
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NKCDL ++ V+ N A E + +P +ETSAK S NVE+AF +A+E+K Q
Sbjct: 120 GNKCDLIEKKVVETNVAREYADSAGIP----FLETSAKSSANVEDAFMIMASEIKKLQGG 175
>gi|397475954|ref|XP_003809378.1| PREDICTED: ras-related protein Rab-31 [Pan paniscus]
Length = 191
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 114 GNKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 163
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELK 70
+ NKC+L +R+V + E++ EY + METSAK S NV+EAF+ LA ++K
Sbjct: 118 LLGNKCELNEKRQVTRDRGEQLAVEYGIKF---METSAKASINVDEAFFTLARDIK 170
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D+ ++ V++ A+E + + I + +ETSAK +TNVE+AF +A ++K R T
Sbjct: 143 GNKSDMADKKVVEYTVAKEFADSL-GIPF-LETSAKSATNVEQAFLTMARQIKERMGTTT 200
Query: 78 CN 79
N
Sbjct: 201 AN 202
>gi|395520361|ref|XP_003764303.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39A
[Sarcophilus harrisii]
Length = 220
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+KCDL S+R+V EAE+M + Y+ ETSAKD+TNVEE+F L ++
Sbjct: 129 GHKCDLVSQRQVSREEAEKMSAACG-MKYI-ETSAKDATNVEESFTILTRDI 178
>gi|222635255|gb|EEE65387.1| hypothetical protein OsJ_20709 [Oryza sativa Japonica Group]
Length = 615
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHY-VMETSAKDSTNVEEAFYCLANELKNRQSAT 76
NKCDL R V+ A+ Y EI +ETSAKDS NVEEAF + +K ++S +
Sbjct: 527 NKCDLAESRVVETAVAQA---YADEIGIPFLETSAKDSINVEEAFLAMCAAIKKQKSGS 582
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ V++ A+E + +P +ETSAK +TNVE+AF +A ++K R
Sbjct: 120 GNKSDMADKKVVEYTVAKEFADSLGIP----FLETSAKSATNVEQAFLTMARQIKERMGT 175
Query: 76 TLCN 79
T N
Sbjct: 176 TTAN 179
>gi|25153277|ref|NP_495984.2| Protein RAB-39 [Caenorhabditis elegans]
gi|19571635|emb|CAA87774.2| Protein RAB-39 [Caenorhabditis elegans]
Length = 229
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
K D++S+R+V++ E GEY + H + +ETS++ NV EAF+ +A E++NR
Sbjct: 134 GTKSDMDSQRQVNYEE----GEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEIQNR 186
>gi|343172838|gb|AEL99122.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL R VD A+E+G +P +ETSAKD+ NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENRVVDTQMGQALADELG--IP----FLETSAKDAVNVEKAFLTMAGEIKKK 172
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DL S+R V+F +A+ E METSAK + NV E F +A +L + +
Sbjct: 133 GNKADLASKRAVEFQDAQAYAE--DNSLLFMETSAKTAMNVNEVFMAIAKKLPKNEPQNV 190
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
P N + L + + R +C
Sbjct: 191 AGAP----GRNRGVDLQESSPASRGQC 213
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 118 LLGNKCELNEKRQVSRERGEQLAVEYGIKF---METSAKASINVEEAFLTLASDIKAKME 174
Query: 75 ATL-CNEP 81
+ N P
Sbjct: 175 KRMEANNP 182
>gi|395513679|ref|XP_003761050.1| PREDICTED: ras-related protein Rab-8A [Sarcophilus harrisii]
Length = 331
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNRQ 73
+ NKCD+ R+V ++E GE + + + METSAK + NVE AF+ LA ++K +
Sbjct: 242 ILGNKCDVNERRQV----SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 297
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKC 104
L ++ IT KS +C
Sbjct: 298 DKKLEGNSPQGNSQGVKITPDQQRKSSFFRC 328
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ VD+ A+E + +P +ETSAK+++NVE+AF +A ++K R
Sbjct: 120 GNKSDMSDKKVVDYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERIGT 175
Query: 76 TLCN 79
T N
Sbjct: 176 TTAN 179
>gi|443895442|dbj|GAC72788.1| hypothetical protein PANT_7d00273 [Pseudozyma antarctica T-34]
Length = 215
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V +E E+ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGSHEGRELAK-----HFGCRFIETSAKQRINVDEAFSNLVREIRR 172
>gi|332225969|ref|XP_003262160.1| PREDICTED: uncharacterized protein LOC100594346 [Nomascus
leucogenys]
Length = 411
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
NKCDL REV +A+E E + I V+ETSAK++ N+EE F ++ ++
Sbjct: 335 NKCDLSDIREVPLKDAKEYAESIGAI--VVETSAKNAINIEELFQGISRQI 383
>gi|326431988|gb|EGD77558.1| TKL/DICTY4 protein kinase [Salpingoeca sp. ATCC 50818]
Length = 916
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 19 NKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE++++VD A+E + V +E SAK++ NVEEAF +A ++K R T+
Sbjct: 124 NKIDLEAKKQVDHATAKEFADNVG--MPFLEVSAKNNINVEEAFMTVAADIKARMGPTI 180
>gi|241714819|ref|XP_002413528.1| RAS-related protein, putative [Ixodes scapularis]
gi|215507342|gb|EEC16836.1| RAS-related protein, putative [Ixodes scapularis]
Length = 150
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ R+V + E GE + H + METSA S NVE+AFY LA ++K +
Sbjct: 61 ILGNKCDMNDLRQV----SRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKEK 115
>gi|343172836|gb|AEL99121.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 18 SNKCDLESEREVDFNE----AEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NKCDL R VD A+E+G +P +ETSAKD+ NVE+AF +A E+K +
Sbjct: 120 GNKCDLVENRVVDTQMGQALADELG--IP----FLETSAKDAVNVEKAFLTMAGEIKKK 172
>gi|345803388|ref|XP_850610.2| PREDICTED: ras-related protein Rab-31 [Canis lupus familiaris]
Length = 195
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGISRQI 167
>gi|406602014|emb|CCH46393.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 314
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDLE+ER + +EAE + + + Y + SAK++ N+++AF L N + R++
Sbjct: 114 LLGNKCDLETERLIRVDEAEGLAKELSLSKY-FDVSAKNNYNIKDAFNYLTNSIIQRKTQ 172
Query: 76 --TLCNEP----INTDNTNS 89
T +P +TDNTNS
Sbjct: 173 IETQILKPELLKQSTDNTNS 192
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
NK DL S++ V ++E +E+ + VP +ETSAK+S NVE+AF +++E+K+R
Sbjct: 120 GNKTDLTSKKVVTYDEGKELADQLGVP----FLETSAKNSHNVEQAFIEMSSEIKSR 172
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANEL 69
+ NKCD+ R+V + E++ I Y +ETSAK S NVEEAFY +A ++
Sbjct: 118 ILGNKCDMTDRRQVSKDRGEKLA-----IDYGVKFLETSAKSSLNVEEAFYTMARDI 169
>gi|281339724|gb|EFB15308.1| hypothetical protein PANDA_010679 [Ailuropoda melanoleuca]
Length = 185
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 106 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGISRQI 157
>gi|301091283|ref|XP_002895829.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262096540|gb|EEY54592.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 194
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK DLE+ R+V+F EA + E +H METSAK + NV++ F +A L
Sbjct: 118 GNKADLEARRKVEFEEAHQYAEDNDILH--METSAKTAVNVKDLFVAIAKRLP------- 168
Query: 78 CNEPINTDNTNSPITLSNDTKSIRNKC 104
P + PIT +KS C
Sbjct: 169 -KNPPQPEREAFPITPPQASKSKSGCC 194
>gi|260786308|ref|XP_002588200.1| hypothetical protein BRAFLDRAFT_57441 [Branchiostoma floridae]
gi|229273359|gb|EEN44211.1| hypothetical protein BRAFLDRAFT_57441 [Branchiostoma floridae]
Length = 215
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL-KNRQSAT 76
NKCDLE++R+V + EA++ + + +E SAK NVEEAF A ++ +N Q +
Sbjct: 123 GNKCDLEAQRDVTYEEAKQFADENGLL--FLEASAKTGENVEEAFLDTARKIYQNIQDGS 180
Query: 77 LCNEPINTDNTNSP-----ITLSNDTKSIRNKCNC 106
L + + P LSND + + C C
Sbjct: 181 LDLNAAESGVQHKPSSPRGTQLSNDQPANKEGCAC 215
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ VD+ A+E + +P +ETSAK+++NVE+AF +A ++K R
Sbjct: 120 GNKSDMSDKKVVDYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERIGT 175
Query: 76 TLCN 79
T N
Sbjct: 176 TTAN 179
>gi|115534952|ref|NP_508455.2| Protein K02E10.1 [Caenorhabditis elegans]
gi|351063986|emb|CCD72274.1| Protein K02E10.1 [Caenorhabditis elegans]
Length = 218
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D++ ER+VDF+ AE++ + Y E SAK N EEAF+ L ++ R +A
Sbjct: 119 GNKADMDQERKVDFDRAEKLASRLGVSLY--EVSAKTGINCEEAFHTLTAAMRERITA 174
>gi|296473718|tpg|DAA15833.1| TPA: RAB31, member RAS oncogene family [Bos taurus]
Length = 182
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGISRQI 167
>gi|206533|gb|AAA41993.1| RAB13, partial [Rattus norvegicus]
Length = 164
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCD+E++R+V +AE + I + ETSAK S NV+EAF LA ++
Sbjct: 79 LLGNKCDMEAKRKVQREQAERLARE-HRIRF-FETSAKSSVNVDEAFSSLARDI 130
>gi|386771439|ref|NP_001246836.1| Rab8, isoform B [Drosophila melanogaster]
gi|383292016|gb|AFH04507.1| Rab8, isoform B [Drosophila melanogaster]
Length = 172
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 83 LLGNKCELTDKRQVSKERGEQLAIEYGIKF---METSAKASINVEEAFLTLASDIKAKTE 139
Query: 75 ATL-CNEPINTDNTNSPI 91
+ N P + P+
Sbjct: 140 KRMEANNPPKGGHQLKPM 157
>gi|343426862|emb|CBQ70390.1| small G-protein Ras1 [Sporisorium reilianum SRZ2]
Length = 215
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V +E E+ + H+ +ETSAK NV+EAF L E++
Sbjct: 119 VVANKCDLEYERQVGSHEGRELAK-----HFGCRFIETSAKQRINVDEAFSNLVREIRR 172
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL----KN 71
+ NKCD+E++R+V +AE + I + ETSAK S NV+EAF LA ++
Sbjct: 118 LLGNKCDMEAKRKVQREQAERLARE-HRIRF-FETSAKSSVNVDEAFSSLARDILLKTGG 175
Query: 72 RQSATLCNEPINTD 85
R+S ++P +TD
Sbjct: 176 RRSGN-SSKPSSTD 188
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKNR 72
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++ +
Sbjct: 118 ILGNKCDMNEKRQV----SKEKGEKLA-IDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
Query: 73 QSATLCNEPINTDNTNSPITLS 94
+ + + + S I LS
Sbjct: 173 LNRKMNDSSSSGAEEFSAILLS 194
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELKNR 72
NKCD+ ++ + ++E G+ + + H + +ETSAK + VEEAFY LA ++K R
Sbjct: 124 GNKCDILDKKVI----SKEQGQALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKR 176
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 118 LLGNKCELNDKRQVSKERGEQLAIEYGIKF---METSAKASINVEEAFLTLASDIKAK 172
>gi|338711687|ref|XP_003362562.1| PREDICTED: ras-related protein Rab-37-like [Equus caballus]
Length = 223
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D+ SER + + E + EY VP METSAK NVE AF +A ELK R
Sbjct: 140 LLGNKADVSSERVIRSEDGEMLAREYGVP----FMETSAKTGMNVELAFLAIAKELKYR- 194
Query: 74 SATLCNEP 81
+ NEP
Sbjct: 195 AGRQANEP 202
>gi|294979229|gb|ADF50359.1| MIP21873p [Drosophila melanogaster]
Length = 182
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 93 LLGNKCELTDKRQVSKERGEQLAIEYGIKF---METSAKASINVEEAFLTLASDIKAKTE 149
Query: 75 ATL-CNEPINTDNTNSPI 91
+ N P + P+
Sbjct: 150 KRMEANNPPKGGHQLKPM 167
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCDL++ R V E + + E E + METSA D+TNV +AF + E+ N S +
Sbjct: 116 GNKCDLDNIRAVSVEEGKSLAE--SEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKV 173
Query: 78 CN 79
N
Sbjct: 174 LN 175
>gi|28875789|ref|NP_789862.1| ras-related protein Rab-3C [Bos taurus]
gi|162764|gb|AAA30418.1| GTP-binding protein [Bos taurus]
Length = 218
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NKCD+E ER + E + +GE++ ETSAKD+ NV++ F L + + ++ S +L
Sbjct: 133 GNKCDMEDERVISSEEGQHLGEHLG--FEFFETSAKDNINVKQTFERLVDIICDKMSESL 190
Query: 78 CNEP 81
+P
Sbjct: 191 ETDP 194
>gi|388851545|emb|CCF54735.1| probable small G-protein Ras1 [Ustilago hordei]
Length = 216
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V +E E+ + H+ +ETSAK NV+EAF L E++
Sbjct: 120 VVANKCDLEYERQVGSHEGRELAK-----HFGCRFIETSAKQRINVDEAFSNLVREIRR 173
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSATL 77
NK D+ ++ VD+ A+E + + I + +ETSAK++ NVE+AF +A ++K R T
Sbjct: 120 GNKSDMADKKVVDYTVAKEFADSLG-IPF-LETSAKNANNVEQAFLTMARQIKERMGTTT 177
Query: 78 CN 79
N
Sbjct: 178 TN 179
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD A+E + VP +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVP----FLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ V++ A+E + +P +ETSAK+++NVE+AF +A ++K R +
Sbjct: 120 GNKSDMTDKKVVEYTVAKEFADSLGIP----FLETSAKNASNVEQAFLTMARQIKERMGS 175
Query: 76 TLCNEPINTDNTNSPITLS 94
+ I T+NT + + +S
Sbjct: 176 S-----IATNNTKASVNVS 189
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 118 LLGNKCELNDKRQVSKERGEQLAVEYGIKF---METSAKASINVEEAFLTLASDIKAK 172
>gi|126135410|ref|XP_001384229.1| hypothetical protein PICST_44586 [Scheffersomyces stipitis CBS
6054]
gi|126091427|gb|ABN66200.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 178
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
V NKCDLE ER+V + E + +ETSAK NVEEAFY L ++ ++ A
Sbjct: 116 VVGNKCDLEIERQVSYEEGLALANSFN--CQFLETSAKQRINVEEAFYNLVRSIREQERA 173
Query: 76 T 76
Sbjct: 174 V 174
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
+ NKCDL ++ VD+ A+E + + I + +ETSAK++ NVE+AF +A E+K R
Sbjct: 121 LVGNKCDLHIKKVVDYTTAKEYADQL-GIPF-LETSAKNAMNVEQAFMTMAAEIKLRVGP 178
Query: 76 TLCNEPINTDNTNSPITLSNDTKS 99
++++ +SP + D+ S
Sbjct: 179 PSSGNNESSEDEDSPPRGTRDSGS 202
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYV--METSAKDSTNVEEAFYCLANELK 70
+ NKCDL R V E G + E H V METSAK T+VE AF LA ++K
Sbjct: 118 ILGNKCDLHESRVVSM----ERGRLLAEEHGVKFMETSAKSGTHVETAFLSLAKDIK 170
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD A+E + VP +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVP----FLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|451856767|gb|EMD70058.1| hypothetical protein COCSADRAFT_156185 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELK--NRQ 73
V NKCDL+ ER+V E + + +ETSAK NV+ AFY + E++ N++
Sbjct: 118 VVGNKCDLDGERQVSTQEGQTLARNFG--CKFIETSAKSRINVDNAFYDIVREIRRYNKE 175
Query: 74 SATLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
++ P + T D ++ + C C
Sbjct: 176 MSSYTGAPGSNGAGPQKTTFETDEQAEKKGCCC 208
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ--SA 75
NK DL +++ VD A+E + + I + +ETSAK++TNVE+AF +A E+K R A
Sbjct: 131 GNKSDLTTKKVVDNTTAKEFADSL-GIPF-LETSAKNATNVEQAFMTMAAEIKKRMGPGA 188
Query: 76 TLCNEPINTDNTNSPI 91
E N ++P+
Sbjct: 189 ATGGERPNLKIDSTPV 204
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
V NKCD+ +R+V + E++ +Y + METSAK + NVE AF LA ++K++
Sbjct: 134 VLGNKCDINDKRQVSKDRGEQLALDYGIKF---METSAKANINVENAFLTLARDIKSKMD 190
Query: 75 ATL 77
L
Sbjct: 191 TKL 193
>gi|345316878|ref|XP_001520246.2| PREDICTED: ras-related protein Rab-8B-like [Ornithorhynchus
anatinus]
Length = 281
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 8/57 (14%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANEL 69
+ NKCD+ +R+V ++E GE + I Y +ETSAK S NVEEAF+ LA ++
Sbjct: 192 ILGNKCDMNDKRQV----SKERGEKLA-IDYGIKFLETSAKSSINVEEAFFTLARDI 243
>gi|440466625|gb|ELQ35884.1| GTP-binding protein ypt1 [Magnaporthe oryzae Y34]
gi|440489321|gb|ELQ68981.1| GTP-binding protein ypt1 [Magnaporthe oryzae P131]
Length = 210
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQSA 75
NK D+ ++ VD+ A+E + +P +ETSAK++ NVE+AF +A ++K R
Sbjct: 128 GNKSDMADKKVVDYTVAKEFADSLGIP----FLETSAKNANNVEQAFLTMARQIKERMGT 183
Query: 76 TLCN 79
T N
Sbjct: 184 TTTN 187
>gi|145525809|ref|XP_001448721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416276|emb|CAK81324.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN--ELKNRQSA 75
+NKCDLE +R + + E++ + I Y ETSAK NV EAF LA+ E +N Q
Sbjct: 122 ANKCDLEEQRVISKQQGEDLANQLG-IEY-FETSAKIGKNVYEAFQRLADLAESQNNQKI 179
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
TL P T++ + I L+++T++ + C
Sbjct: 180 TL---PNLTEDNSYKINLTSNTRNKKKGQEC 207
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD A+E + VP +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVP----FLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|74833688|emb|CAI39323.1| rab_C04 [Paramecium tetraurelia]
Length = 199
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 18 SNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLAN--ELKNRQSA 75
+NKCDLE +R + + E++ + I Y ETSAK NV EAF LA+ E +N Q
Sbjct: 113 ANKCDLEEQRVISKQQGEDLANQLG-IEY-FETSAKIGKNVYEAFQRLADLAESQNNQKI 170
Query: 76 TLCNEPINTDNTNSPITLSNDTKSIRNKCNC 106
TL P T++ + I L+++T++ + C
Sbjct: 171 TL---PNLTEDNSYKINLTSNTRNKKKGQEC 198
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EYVPEIHYVMETSAKDSTNVEEAFYCLANELKNR 72
+ NKC+L +R+V E++ EY + METSAK S NVEEAF LA+++K +
Sbjct: 118 LLGNKCELNDKRQVSKERGEQLAIEYGIKF---METSAKASINVEEAFLTLASDIKAK 172
>gi|77404176|ref|NP_659562.2| ras-related protein Rab-31 [Rattus norvegicus]
gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus]
Length = 195
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 116 IAGNKCDLSDIREVPLKDAKEYAESIGAL--VVETSAKNAINIEELFQGISRQI 167
>gi|321465957|gb|EFX76955.1| hypothetical protein DAPPUDRAFT_305964 [Daphnia pulex]
Length = 213
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANE-LKNRQS 74
+ NK DL+ ER V EA E + V HY +TSAK + +EE F L + L+ +S
Sbjct: 123 IVGNKIDLDKERNVPAEEALEYSKSVGATHY--QTSAKTNRGIEELFLDLTQQLLRMAES 180
Query: 75 ATLCNEPIN-TDNTNSPITLSNDTKSIRNKC 104
N IN T N N + + +D+ + + C
Sbjct: 181 QNELNSSINLTSNRNPEVVIVDDSLAPKKSC 211
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD A+E + VP +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVP----FLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|131888|sp|P28775.1|RAS_LENED RecName: Full=Ras-like protein; Flags: Precursor
gi|217948|dbj|BAA00642.1| ras protein [Lentinula edodes]
Length = 217
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHY---VMETSAKDSTNVEEAFYCLANELKN 71
V +NKCDLE ER+V NE ++ H+ +ETSAK NV++AF L E++
Sbjct: 120 VVANKCDLEYERQVGMNEGRDLAR-----HFGCKFVETSAKVRINVDQAFQDLVREIRK 173
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 18 SNKCDLESEREVDFNEAEEMGEY--VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQS 74
NK DL +++ VD A+E + VP +ETSAK++TNVE+AF +A E+K R
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVP----FLETSAKNATNVEQAFMTMAAEIKKRMG 174
>gi|62900806|sp|Q6GQP4.2|RAB31_RAT RecName: Full=Ras-related protein Rab-31; AltName: Full=GTP-binding
protein Rab0
Length = 194
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 115 IAGNKCDLSDIREVPLKDAKEYAESIGAL--VVETSAKNAINIEELFQGISRQI 166
>gi|301772696|ref|XP_002921772.1| PREDICTED: ras-related protein Rab-31-like [Ailuropoda melanoleuca]
Length = 197
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 16 VWSNKCDLESEREVDFNEAEEMGEYVPEIHYVMETSAKDSTNVEEAFYCLANEL 69
+ NKCDL REV +A+E E + + V+ETSAK++ N+EE F ++ ++
Sbjct: 118 IAGNKCDLSDIREVPLKDAKEYAESIGAV--VVETSAKNAINIEELFQGISRQI 169
>gi|363739586|ref|XP_414855.3| PREDICTED: ras-related protein Rab-26 [Gallus gallus]
Length = 253
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 16 VWSNKCDLESEREVDFNEAEEMG-EY-VPEIHYVMETSAKDSTNVEEAFYCLANELKNRQ 73
+ NK D +R V + E++ EY VP METSAK NVE AF +A ELK+R
Sbjct: 171 LLGNKVDSAQDRVVKREDGEKLAKEYGVP----FMETSAKSGLNVELAFTAIAKELKHR- 225
Query: 74 SATLCNEP 81
S L NEP
Sbjct: 226 SMKLPNEP 233
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.126 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,601,381,033
Number of Sequences: 23463169
Number of extensions: 54321061
Number of successful extensions: 152490
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 4842
Number of HSP's that attempted gapping in prelim test: 148339
Number of HSP's gapped (non-prelim): 5569
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)