BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5788
(204 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332022369|gb|EGI62681.1| Mediator of RNA polymerase II transcription subunit 17 [Acromyrmex
echinatior]
Length = 646
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/135 (86%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQISA++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 511 MHMSYEPQELRDLIFCQIYQHQISAVQALAKCMGWQFLANSSHLGLGSVEPLGNASSCIL 570
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 571 ASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 630
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 631 NFLNKMELLMASLTS 645
>gi|380011201|ref|XP_003689699.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 17-like [Apis florea]
Length = 644
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 509 MHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCIL 568
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 569 ASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 628
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 629 NFLNKMELLMASLTS 643
>gi|66507375|ref|XP_394516.2| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Apis mellifera]
Length = 644
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 509 MHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCIL 568
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 569 ASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 628
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 629 NFLNKMELLMASLTS 643
>gi|340713035|ref|XP_003395057.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 17-like [Bombus terrestris]
Length = 644
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 509 MHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCIL 568
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 569 ASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 628
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 629 NFLNKMELLMASLTS 643
>gi|350419682|ref|XP_003492267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Bombus impatiens]
Length = 644
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 509 MHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCIL 568
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 569 ASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 628
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 629 NFLNKMELLMASLTS 643
>gi|383847603|ref|XP_003699442.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Megachile rotundata]
Length = 644
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 509 MHMSYEPQELRDLIFCQIYQHQITAVQSLAKCMGWQFLANSSHLGLGAVEPLGNASSCIL 568
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 569 ASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 628
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 629 NFLNKMELLMASLTS 643
>gi|307212331|gb|EFN88135.1| Mediator of RNA polymerase II transcription subunit 17
[Harpegnathos saltator]
Length = 646
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 129/135 (95%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLG+G VEPLGNASSC+L
Sbjct: 511 MHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGVGSVEPLGNASSCIL 570
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QV+IAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 571 ASPIGDRMIAVRCEPQTGVQVSIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 630
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 631 NFLNKMELLMASLTS 645
>gi|307172011|gb|EFN63605.1| Mediator of RNA polymerase II transcription subunit 17 [Camponotus
floridanus]
Length = 645
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 128/135 (94%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQI+A++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 510 MHMSYEPQELRDLIFCQIYQHQINAVQALAKCMGWQFLANSSHLGLGSVEPLGNASSCIL 569
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDRMI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGK
Sbjct: 570 ASPIGDRMIAVRCEPQMGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGK 629
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLM+SL S
Sbjct: 630 NFLNKMELLMSSLMS 644
>gi|156551237|ref|XP_001605806.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Nasonia vitripennis]
Length = 641
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/135 (85%), Positives = 126/135 (93%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFCQIYQHQISA++ LAKCMGWQFL++S+HLGLG VEPLGNASSC+L
Sbjct: 506 MHMSYEPQELRDLIFCQIYQHQISAVQGLAKCMGWQFLANSSHLGLGAVEPLGNASSCIL 565
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP GDRMI+VRC+P IQV+IAHSPRKDFF GQLVKERKWENLGG FKEVRWDKMEGK
Sbjct: 566 ASPNGDRMIAVRCDPHTKIQVSIAHSPRKDFFPGQLVKERKWENLGGSFKEVRWDKMEGK 625
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 626 NFLNKMELLMASLTS 640
>gi|242014384|ref|XP_002427871.1| CRSP complex subunit, putative [Pediculus humanus corporis]
gi|212512340|gb|EEB15133.1| CRSP complex subunit, putative [Pediculus humanus corporis]
Length = 651
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/135 (82%), Positives = 123/135 (91%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M++SYEPQELRDL++CQIYQHQI+A + LAKCMGWQ L++S HLGLG VEPLGNASS +L
Sbjct: 515 MRMSYEPQELRDLLYCQIYQHQITAAQALAKCMGWQILANSLHLGLGSVEPLGNASSIIL 574
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP GDRMI+VRCEPQ GIQV IA SPRKDFF GQLVKERKWENLGG FKEVRWDKMEGK
Sbjct: 575 TSPTGDRMIAVRCEPQFGIQVWIAQSPRKDFFPGQLVKERKWENLGGGFKEVRWDKMEGK 634
Query: 121 NFLNKMELLMASLTS 135
NFLNKMELLMASLTS
Sbjct: 635 NFLNKMELLMASLTS 649
>gi|193641165|ref|XP_001946953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Acyrthosiphon pisum]
Length = 642
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 107/135 (79%), Positives = 123/135 (91%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M LSYEPQELRDLIFCQIYQHQI ++ +AK GWQFL+SS+HLGLG VEP+GNASSCLL
Sbjct: 506 MYLSYEPQELRDLIFCQIYQHQIMGVQSVAKTQGWQFLASSSHLGLGPVEPMGNASSCLL 565
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP+GDR+ISV+CEPQ + V+IAHSP+KDFF GQLVKERKWENLGG FK+VRWDKMEGK
Sbjct: 566 ASPIGDRLISVKCEPQGNVSVSIAHSPKKDFFGGQLVKERKWENLGGSFKKVRWDKMEGK 625
Query: 121 NFLNKMELLMASLTS 135
NFLNK+ELLMASLT+
Sbjct: 626 NFLNKIELLMASLTN 640
>gi|91080451|ref|XP_969541.1| PREDICTED: similar to AGAP009141-PA [Tribolium castaneum]
gi|270005569|gb|EFA02017.1| hypothetical protein TcasGA2_TC007640 [Tribolium castaneum]
Length = 639
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLIFC I QHQI A++ LAK MGWQFL++S HLG G VEPLGNASSCLL
Sbjct: 503 MHMSYEPQELRDLIFCHINQHQILAVQALAKTMGWQFLANSNHLGTGAVEPLGNASSCLL 562
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGK 120
+SP GDR+I+VRCEPQ GIQV +AHSPR DFF +LV ERKWE+LGG F++VR +KMEG+
Sbjct: 563 ASPTGDRIIAVRCEPQTGIQVCVAHSPRSDFFPSRLVTERKWEHLGGQFRDVRLEKMEGR 622
Query: 121 NFLNKMELLMASLTS 135
NFL+KMELLMASLTS
Sbjct: 623 NFLHKMELLMASLTS 637
>gi|357620752|gb|EHJ72824.1| hypothetical protein KGM_07165 [Danaus plexippus]
Length = 640
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 115/134 (85%)
Query: 2 KLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLS 61
LSYE QELRDLIFCQIYQHQ++ ++ + +CMGWQ L+SS+HLG G VEPL NASSCLL+
Sbjct: 505 NLSYELQELRDLIFCQIYQHQMTGVQAVGRCMGWQLLASSSHLGAGPVEPLANASSCLLA 564
Query: 62 SPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGKN 121
SP GDRMI++RCEP GIQV IA SP+KDFF +LV+++KWENLGG FKEV+ +KMEGKN
Sbjct: 565 SPNGDRMIAIRCEPSVGIQVFIAQSPKKDFFVSELVQDKKWENLGGAFKEVKLEKMEGKN 624
Query: 122 FLNKMELLMASLTS 135
FLNKMELLMA L+S
Sbjct: 625 FLNKMELLMACLSS 638
>gi|195444779|ref|XP_002070025.1| GK11248 [Drosophila willistoni]
gi|194166110|gb|EDW81011.1| GK11248 [Drosophila willistoni]
Length = 645
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 112/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 506 MRLSYEPQELRDLILCQINSHQISCLVSLARCMAWTVLSNSNHLGIGKVEPLGNASSCLL 565
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP GDRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 566 ASPNGDRMIAVQIRCDPQIDVKVYIAKSPRQDFFPNPLVPEKLWENLGGSFKEVRFDKIE 625
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 626 GKSFLNKMEFLMASLTS 642
>gi|58393212|ref|XP_319901.2| AGAP009141-PA [Anopheles gambiae str. PEST]
gi|74800788|sp|Q7PVZ2.2|MED17_ANOGA RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Mediator complex subunit 17
gi|55235480|gb|EAA14731.2| AGAP009141-PA [Anopheles gambiae str. PEST]
Length = 645
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLI CQI QHQI ++ LAKCM WQ LSSS+HLG+G VEPLGNASSC+L
Sbjct: 507 MHMSYEPQELRDLILCQISQHQIVCLQNLAKCMAWQILSSSSHLGIGSVEPLGNASSCVL 566
Query: 61 SSPMGDRMIS--VRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DR+I+ VRC+ Q ++V IA SP KDFF G LV+ R WE+LGG FKEVR+DKME
Sbjct: 567 ASPNSDRLIAVQVRCDSQIDVKVFIAQSPAKDFFPGSLVQGRHWEHLGGHFKEVRFDKME 626
Query: 119 GKNFLNKMELLMASLTS 135
GKNF NKME LMASLTS
Sbjct: 627 GKNFHNKMEFLMASLTS 643
>gi|125778408|ref|XP_001359962.1| GA20720 [Drosophila pseudoobscura pseudoobscura]
gi|195157848|ref|XP_002019806.1| GL12596 [Drosophila persimilis]
gi|54639712|gb|EAL29114.1| GA20720 [Drosophila pseudoobscura pseudoobscura]
gi|194116397|gb|EDW38440.1| GL12596 [Drosophila persimilis]
Length = 642
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 503 MRLSYEPQELRDLILCQINSHQISCLVSLARCMAWTVLSNSNHLGIGKVEPLGNASSCLL 562
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP GDRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEV++DK+E
Sbjct: 563 ASPNGDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGNFKEVKFDKIE 622
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 623 GKSFLNKMEFLMASLTS 639
>gi|312384274|gb|EFR29037.1| hypothetical protein AND_02330 [Anopheles darlingi]
Length = 754
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYEPQELRDLI CQI QHQI ++ LAKCM WQ LSSS+HLG+G VEPLGNASSC+L
Sbjct: 616 MHMSYEPQELRDLILCQISQHQIVCLQNLAKCMAWQILSSSSHLGIGAVEPLGNASSCVL 675
Query: 61 SSPMGDRMIS--VRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DR+I+ VRC+ Q ++V IA SP KDFF G LV+ R WE+LGG FKEVR+DKME
Sbjct: 676 ASPNSDRLIAVQVRCDSQIDVKVYIAQSPAKDFFPGSLVQGRHWEHLGGHFKEVRFDKME 735
Query: 119 GKNFLNKMELLMASLTS 135
GKNF NKME LMASLTS
Sbjct: 736 GKNFHNKMEFLMASLTS 752
>gi|195055229|ref|XP_001994522.1| GH15742 [Drosophila grimshawi]
gi|193892285|gb|EDV91151.1| GH15742 [Drosophila grimshawi]
Length = 648
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 509 MRLSYEPQELRDLILCQINSHQISCLVSLARCMAWTVLSNSNHLGIGKVEPLGNASSCLL 568
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 569 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKFWENLGGNFKEVRFDKIE 628
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 629 GKSFLNKMEFLMASLTS 645
>gi|21357131|ref|NP_650686.1| mediator complex subunit 17 [Drosophila melanogaster]
gi|74947827|sp|Q9VEC1.1|MED17_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Mediator complex subunit 17; AltName:
Full=dMED17; AltName: Full=dTRAP80
gi|7533040|gb|AAF63336.1|AF244916_1 mediator transcriptional cofactor TRAP80 [Drosophila melanogaster]
gi|9937474|gb|AAG02460.1|AF289995_1 thyroid hormone receptor-associated protein TRAP80 [Drosophila
melanogaster]
gi|7300347|gb|AAF55506.1| mediator complex subunit 17 [Drosophila melanogaster]
gi|21428742|gb|AAM50031.1| SD10038p [Drosophila melanogaster]
gi|220942342|gb|ACL83714.1| MED17-PA [synthetic construct]
Length = 642
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 503 MRLSYEPQELRDLILCQINSHQISCLISLARCMSWTVLSNSNHLGIGKVEPLGNASSCLL 562
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 563 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGTFKEVRFDKIE 622
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 623 GKSFLNKMEFLMASLTS 639
>gi|170029411|ref|XP_001842586.1| CRSP complex subunit 6 [Culex quinquefasciatus]
gi|167862417|gb|EDS25800.1| CRSP complex subunit 6 [Culex quinquefasciatus]
Length = 647
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 112/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYE QELRDLI+CQI QHQI ++ LAKCM WQ LS+S+HLG+G VEPLGNASSC+L
Sbjct: 509 MHMSYEMQELRDLIYCQISQHQIICLQNLAKCMAWQILSNSSHLGIGAVEPLGNASSCVL 568
Query: 61 SSPMGDRMIS--VRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DR+I+ VRC+PQ ++V IA SP KDFF G LV+ R WE+LGG FKEVR+DKME
Sbjct: 569 ASPNSDRLIAVQVRCDPQIDVKVFIAQSPGKDFFPGSLVQGRHWEHLGGHFKEVRFDKME 628
Query: 119 GKNFLNKMELLMASLTS 135
GKNF NKME LMASLTS
Sbjct: 629 GKNFHNKMEFLMASLTS 645
>gi|195497545|ref|XP_002096146.1| GE25518 [Drosophila yakuba]
gi|194182247|gb|EDW95858.1| GE25518 [Drosophila yakuba]
Length = 642
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 503 MRLSYEPQELRDLILCQINSHQISCLISLARCMAWTVLSNSNHLGVGKVEPLGNASSCLL 562
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 563 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGTFKEVRFDKIE 622
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 623 GKSFLNKMEFLMASLTS 639
>gi|195348943|ref|XP_002041006.1| GM15283 [Drosophila sechellia]
gi|194122611|gb|EDW44654.1| GM15283 [Drosophila sechellia]
Length = 642
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 503 MRLSYEPQELRDLILCQINSHQISCLISLARCMSWTVLSNSNHLGVGKVEPLGNASSCLL 562
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 563 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGTFKEVRFDKIE 622
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 623 GKSFLNKMEFLMASLTS 639
>gi|195569981|ref|XP_002102987.1| GD19210 [Drosophila simulans]
gi|194198914|gb|EDX12490.1| GD19210 [Drosophila simulans]
Length = 442
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 303 MRLSYEPQELRDLILCQINSHQISCLISLARCMSWTVLSNSNHLGVGKVEPLGNASSCLL 362
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 363 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGTFKEVRFDKIE 422
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 423 GKSFLNKMEFLMASLTS 439
>gi|194744871|ref|XP_001954916.1| GF18510 [Drosophila ananassae]
gi|190627953|gb|EDV43477.1| GF18510 [Drosophila ananassae]
Length = 642
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+CM W LS+S HLG+G VEPLGNASSCLL
Sbjct: 503 MRLSYEPQELRDLILCQINSHQISCLISLARCMAWTVLSNSNHLGIGKVEPLGNASSCLL 562
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 563 ASPNSDRMIAVQIRCDPQIDVKVYIAKSPRQDFFPSPLVPEKLWENLGGNFKEVRFDKIE 622
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 623 GKSFLNKMEFLMASLTS 639
>gi|195389813|ref|XP_002053568.1| GJ23280 [Drosophila virilis]
gi|194151654|gb|EDW67088.1| GJ23280 [Drosophila virilis]
Length = 646
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 110/137 (80%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
MKLSYEPQELRDLI CQI HQIS + LA+ M W LS+S HLG+G VEPLGNASSCLL
Sbjct: 507 MKLSYEPQELRDLILCQINSHQISCLVSLARYMAWTVLSNSNHLGIGKVEPLGNASSCLL 566
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 567 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKFWENLGGNFKEVRFDKIE 626
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 627 GKSFLNKMEFLMASLTS 643
>gi|194900282|ref|XP_001979686.1| GG22704 [Drosophila erecta]
gi|190651389|gb|EDV48644.1| GG22704 [Drosophila erecta]
Length = 642
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 110/137 (80%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M+LSYEPQELRDLI CQI HQIS + LA+ M W LS+S HLG+G VEPLGNASSCLL
Sbjct: 503 MRLSYEPQELRDLILCQINSHQISCLITLARYMAWTVLSNSNHLGVGKVEPLGNASSCLL 562
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 563 ASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGTFKEVRFDKIE 622
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 623 GKSFLNKMEFLMASLTS 639
>gi|195107347|ref|XP_001998275.1| GI23722 [Drosophila mojavensis]
gi|193914869|gb|EDW13736.1| GI23722 [Drosophila mojavensis]
Length = 647
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 109/137 (79%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
MKLSYEPQELRDLI CQI HQIS + LA+ M W LS+S HLG+G VEPLGNASSCLL
Sbjct: 508 MKLSYEPQELRDLILCQINSHQISCLVSLARYMAWTVLSNSNHLGIGKVEPLGNASSCLL 567
Query: 61 SSPMGDRMISV--RCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
SP DRMI+V RC+PQ ++V IA SPR+DFF LV E+ WENLGG FKEVR+DK+E
Sbjct: 568 GSPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKFWENLGGNFKEVRFDKIE 627
Query: 119 GKNFLNKMELLMASLTS 135
GK+FLNKME LMASLTS
Sbjct: 628 GKSFLNKMEFLMASLTS 644
>gi|157125041|ref|XP_001654224.1| mediator complex, 80kD-subunit, putative [Aedes aegypti]
gi|121957331|sp|Q17JT4.1|MED17_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Mediator complex subunit 17
gi|108882753|gb|EAT46978.1| AAEL001883-PA [Aedes aegypti]
Length = 645
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 110/137 (80%), Gaps = 2/137 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
M +SYE QELRDLI QI QHQI ++ LAKCM WQ LS+S+HLG+G VEPLGNASSC+L
Sbjct: 507 MHMSYEMQELRDLILYQISQHQIVCLQSLAKCMAWQILSNSSHLGIGSVEPLGNASSCVL 566
Query: 61 SSPMGDRMIS--VRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP DR+I+ VRC+PQ ++V IA SP KDFF G LV+ R WE+LGG FKE+R+DKME
Sbjct: 567 ASPNSDRLIAVQVRCDPQLDVKVYIAQSPGKDFFPGSLVQGRHWEHLGGHFKELRFDKME 626
Query: 119 GKNFLNKMELLMASLTS 135
GKNF NKME LMASLTS
Sbjct: 627 GKNFHNKMEFLMASLTS 643
>gi|391344104|ref|XP_003746343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Metaseiulus occidentalis]
Length = 631
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+KLSYEP ELR L+ Q+ QHQ++A++ LAK +GW+ LS+ +G+GGVEPLGNASS ++
Sbjct: 495 IKLSYEPPELRFLLMSQVAQHQVNAVQTLAKYVGWKVLSTCGSVGVGGVEPLGNASSVVM 554
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSP-RKDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
+SP G+++++VR P AG++V+++ P ++DF+ LVK+RKW L GPFKEV ++M+G
Sbjct: 555 ASPNGEKILAVRVSPGAGVKVSLSSCPQQQDFYPSSLVKDRKWHLLNGPFKEVSLERMQG 614
Query: 120 KNFLNKMELLMASLTS 135
K FLNKME LMA+LT+
Sbjct: 615 KTFLNKMEHLMAALTT 630
>gi|443707195|gb|ELU02907.1| hypothetical protein CAPTEDRAFT_220719 [Capitella teleta]
Length = 642
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 95/140 (67%), Gaps = 5/140 (3%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSYEPQEL D I Q+ H I ++ LAK MGWQ L+S++H+G+G +EP+GN S +L
Sbjct: 497 INLSYEPQELNDFILTQVAHHHICIVQALAKLMGWQLLTSNSHIGVGEMEPVGNVQSIML 556
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFF-----CGQLVKERKWENLGGPFKEVRWD 115
+SP+G+R+I+VR P +G+ V + +P D + KWE LGGPF +V D
Sbjct: 557 ASPLGNRVIAVRSGPFSGVHVHVQKTPDVDTIRELHESKHVSLAEKWEMLGGPFHKVHLD 616
Query: 116 KMEGKNFLNKMELLMASLTS 135
K+EG+NF+NKMELLMA L+S
Sbjct: 617 KLEGRNFVNKMELLMACLSS 636
>gi|153791531|ref|NP_001093376.1| mediator complex subunit 17 [Xenopus laevis]
gi|148921629|gb|AAI46626.1| LOC100101325 protein [Xenopus laevis]
Length = 640
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNASS +
Sbjct: 503 ITLSHQEQELQDFLLSQMSQHQVLAVQQLAKVMGWHLLSFSNHVGLGQVETIGNASSITV 562
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD G +++E KW+ L GPFKEV+W+KM
Sbjct: 563 TSPNGDYAISVRNGPESGSKVMVQF-PRNQCKDLPKGDVMQENKWQYLRGPFKEVQWNKM 621
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLMA++T
Sbjct: 622 EGRNFVYKMELLMAAMT 638
>gi|62858965|ref|NP_001016974.1| mediator of RNA polymerase II transcription subunit 17 [Xenopus
(Silurana) tropicalis]
gi|123885985|sp|Q0VFR9.1|MED17_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 6; Short=CRSP complex
subunit 6; AltName: Full=Mediator complex subunit 17
gi|110645718|gb|AAI18726.1| cofactor required for Sp1 transcriptional activation, subunit 6,
77kDa [Xenopus (Silurana) tropicalis]
Length = 639
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS + H+GLG VE +GNASS +
Sbjct: 502 ITLSHQEQELQDFLLSQMSQHQVLAVQQLAKVMGWHVLSFTNHVGLGQVESVGNASSITV 561
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD G +++E KW+ L GP+KEV+W+KM
Sbjct: 562 TSPNGDYAISVRNGPESGTKVMVQF-PRSQCKDLPKGDVLQENKWQYLRGPYKEVQWNKM 620
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLMA+LT
Sbjct: 621 EGRNFVYKMELLMAALT 637
>gi|57529323|ref|NP_001006280.1| mediator of RNA polymerase II transcription subunit 17 [Gallus
gallus]
gi|82081099|sp|Q5ZID1.1|MED17_CHICK RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 6; Short=CRSP complex
subunit 6; AltName: Full=Mediator complex subunit 17
gi|53136366|emb|CAG32512.1| hypothetical protein RCJMB04_27o3 [Gallus gallus]
Length = 643
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 506 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 565
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD G ++++ KW +L GPFKEV+W+KM
Sbjct: 566 ASPNGDYAISVRNGPESGSKVMVQF-PRSQCKDLPKGDVLQDNKWNHLRGPFKEVQWNKM 624
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLMA+LT
Sbjct: 625 EGRNFVYKMELLMAALT 641
>gi|326914502|ref|XP_003203564.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Meleagris gallopavo]
Length = 587
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 450 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 509
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD G ++++ KW +L GPFKEV+W+KM
Sbjct: 510 ASPNGDYAISVRNGPESGSKVMVQF-PRSQCKDLPKGDVLQDNKWNHLRGPFKEVQWNKM 568
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLMA+LT
Sbjct: 569 EGRNFVYKMELLMAALT 585
>gi|224043637|ref|XP_002200147.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Taeniopygia guttata]
Length = 643
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 506 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 565
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD G ++++ KW +L GPFKEV+W+KM
Sbjct: 566 ASPNGDYAISVRNGPESGSKVMVQF-PRSQCKDLPKGDVLQDSKWNHLRGPFKEVQWNKM 624
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLMA+LT
Sbjct: 625 EGRNFVYKMELLMAALT 641
>gi|387763569|ref|NP_001248577.1| mediator of RNA polymerase II transcription subunit 17 [Macaca
mulatta]
gi|355566961|gb|EHH23340.1| hypothetical protein EGK_06791 [Macaca mulatta]
gi|380787533|gb|AFE65642.1| mediator of RNA polymerase II transcription subunit 17 [Macaca
mulatta]
gi|383414675|gb|AFH30551.1| mediator of RNA polymerase II transcription subunit 17 [Macaca
mulatta]
gi|384939414|gb|AFI33312.1| mediator of RNA polymerase II transcription subunit 17 [Macaca
mulatta]
Length = 651
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|194389172|dbj|BAG61603.1| unnamed protein product [Homo sapiens]
Length = 621
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 482 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 541
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 542 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 600
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 601 EGRNFVYKMELLMSALS 617
>gi|332207930|ref|XP_003253048.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Nomascus leucogenys]
Length = 651
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|297689966|ref|XP_002822403.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Pongo abelii]
Length = 651
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|28558975|ref|NP_004259.3| mediator of RNA polymerase II transcription subunit 17 [Homo
sapiens]
gi|296437366|sp|Q9NVC6.2|MED17_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Activator-recruited cofactor 77 kDa
component; Short=ARC77; AltName: Full=Cofactor required
for Sp1 transcriptional activation subunit 6; Short=CRSP
complex subunit 6; AltName: Full=Mediator complex
subunit 17; AltName: Full=Thyroid hormone
receptor-associated protein complex 80 kDa component;
Short=Trap80; AltName: Full=Transcriptional coactivator
CRSP77; AltName: Full=Vitamin D3 receptor-interacting
protein complex 80 kDa component; Short=DRIP80
gi|119587324|gb|EAW66920.1| cofactor required for Sp1 transcriptional activation, subunit 6,
77kDa, isoform CRA_a [Homo sapiens]
gi|208966718|dbj|BAG73373.1| mediator complex subunit 17 [synthetic construct]
Length = 651
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|4838129|gb|AAD30856.1|AF105421_1 vitamin D3 receptor interacting protein [Homo sapiens]
Length = 652
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 513 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 572
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 573 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 631
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 632 EGRNFVYKMELLMSALS 648
>gi|7023077|dbj|BAA91827.1| unnamed protein product [Homo sapiens]
gi|10733361|gb|AAD22031.2| thyroid hormone receptor-associated protein complex component
TRAP80 [Homo sapiens]
gi|18089270|gb|AAH21101.1| Mediator complex subunit 17 [Homo sapiens]
gi|193785734|dbj|BAG51169.1| unnamed protein product [Homo sapiens]
Length = 651
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|332837506|ref|XP_508698.3| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Pan troglodytes]
gi|410213770|gb|JAA04104.1| mediator complex subunit 17 [Pan troglodytes]
gi|410255172|gb|JAA15553.1| mediator complex subunit 17 [Pan troglodytes]
gi|410308064|gb|JAA32632.1| mediator complex subunit 17 [Pan troglodytes]
gi|410351133|gb|JAA42170.1| mediator complex subunit 17 [Pan troglodytes]
Length = 651
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKILVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|296216802|ref|XP_002754724.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
isoform 1 [Callithrix jacchus]
Length = 651
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV W+KM
Sbjct: 572 ASPNGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDTKWSHLRGPFKEVHWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|397485392|ref|XP_003813831.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Pan paniscus]
Length = 651
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKILVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|160333191|ref|NP_001029902.2| mediator of RNA polymerase II transcription subunit 17 [Bos taurus]
gi|75057775|sp|Q5BIR6.1|MED17_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 6; Short=CRSP complex
subunit 6; AltName: Full=Mediator complex subunit 17
gi|60650216|gb|AAX31340.1| cofactor required for Sp1 transcriptional activation, subunit 6,
77kDa [Bos taurus]
gi|296471981|tpg|DAA14096.1| TPA: mediator of RNA polymerase II transcription subunit 17 [Bos
taurus]
gi|440909080|gb|ELR59030.1| Mediator of RNA polymerase II transcription subunit 17 [Bos
grunniens mutus]
Length = 651
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS+E QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG VE +GNAS+ +
Sbjct: 512 ITLSHEGQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPVESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPNGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|395520498|ref|XP_003764366.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Sarcophilus harrisii]
Length = 647
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H GLG VE +GNAS+ +
Sbjct: 509 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHAGLGPVESIGNASAITV 568
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 569 ASPSGDYAISVRNGPESGSKVMVQF-PRSQCKDLPKSDVLQDGKWNHLRGPFKEVQWNKM 627
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++LT
Sbjct: 628 EGRNFVYKMELLMSALT 644
>gi|149635170|ref|XP_001512596.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Ornithorhynchus anatinus]
Length = 653
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG VE +GNAS+ ++S
Sbjct: 517 LSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPVESIGNASAITVAS 576
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
P GD ISVR P++G +V + PR KD ++++ KW +L GPFKEV+W+KMEG
Sbjct: 577 PSGDYAISVRNGPESGSKVMVQF-PRCQCKDLPKSDVLQDGKWNHLRGPFKEVQWNKMEG 635
Query: 120 KNFLNKMELLMASLT 134
+NF+ KMELLM++LT
Sbjct: 636 RNFVYKMELLMSALT 650
>gi|403301788|ref|XP_003941562.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Saimiri boliviensis boliviensis]
Length = 639
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 500 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 559
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV W+KM
Sbjct: 560 ASPNGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDTKWSHLRGPFKEVHWNKM 618
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 619 EGRNFVYKMELLMSALS 635
>gi|327269179|ref|XP_003219372.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Anolis carolinensis]
Length = 643
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 98/137 (71%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 505 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 564
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD ++++ KW L GPFKEV+W+KM
Sbjct: 565 ASPNGDYSISVRNGPESGSKVMVQF-PRCQCKDLPKSDVLQDNKWNYLRGPFKEVQWNKM 623
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLMA+LT
Sbjct: 624 EGRNFVYKMELLMAALT 640
>gi|395814675|ref|XP_003780870.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Otolemur garnettii]
Length = 651
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKVMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|334330746|ref|XP_001368775.2| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Monodelphis domestica]
Length = 649
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H GLG VE +GNAS+ +
Sbjct: 511 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHAGLGPVESIGNASTITV 570
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 571 ASPSGDYAISVRNGPESGSKVMVQF-PRSQCKDLPKSDVLQDGKWNHLRGPFREVQWNKM 629
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++LT
Sbjct: 630 EGRNFVYKMELLMSALT 646
>gi|291384073|ref|XP_002708496.1| PREDICTED: mediator complex subunit 17 [Oryctolagus cuniculus]
Length = 661
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 522 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 581
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 582 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWNHLRGPFKEVQWNKM 640
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 641 EGRNFVYKMELLMSALS 657
>gi|426252189|ref|XP_004019798.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Ovis aries]
Length = 770
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS+E QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG VE +GNAS+ +
Sbjct: 631 ITLSHEGQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPVESIGNASAITV 690
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 691 ASPNGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWNKM 749
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 750 EGRNFVYKMELLMSALS 766
>gi|348565631|ref|XP_003468606.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Cavia porcellus]
Length = 651
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|301788346|ref|XP_002929588.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Ailuropoda melanoleuca]
gi|281348045|gb|EFB23629.1| hypothetical protein PANDA_019808 [Ailuropoda melanoleuca]
Length = 651
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|345788464|ref|XP_533975.3| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Canis lupus familiaris]
Length = 651
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 IALSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|351713320|gb|EHB16239.1| Mediator of RNA polymerase II transcription subunit 17
[Heterocephalus glaber]
Length = 474
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 335 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 394
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 395 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKNDVLQDSKWNHLRGPFKEVQWNKM 453
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 454 EGRNFVYKMELLMSALS 470
>gi|444523446|gb|ELV13533.1| Mediator of RNA polymerase II transcription subunit 17 [Tupaia
chinensis]
Length = 422
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 283 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 342
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 343 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKM 401
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 402 EGRNFVYKMELLMSALS 418
>gi|350588402|ref|XP_003129834.3| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Sus scrofa]
Length = 651
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKVMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFREVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|4220896|gb|AAD12723.1| transcriptional co-activator CRSP77 [Homo sapiens]
Length = 383
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ HQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 244 ITLSYQEQELQDFLLSQMSHHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 303
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 304 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 362
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 363 EGRNFVYKMELLMSALS 379
>gi|354488763|ref|XP_003506536.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Cricetulus griseus]
gi|344255837|gb|EGW11941.1| Mediator of RNA polymerase II transcription subunit 17 [Cricetulus
griseus]
Length = 649
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 510 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 569
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 570 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKM 628
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 629 EGRNFVYKMELLMSALS 645
>gi|157817885|ref|NP_001100271.1| mediator of RNA polymerase II transcription subunit 17 [Rattus
norvegicus]
gi|149020647|gb|EDL78452.1| cofactor required for Sp1 transcriptional activation, subunit 6
[Rattus norvegicus]
Length = 649
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 510 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 569
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 570 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKM 628
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 629 EGRNFVYKMELLMSALS 645
>gi|426370132|ref|XP_004052026.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Gorilla gorilla gorilla]
Length = 845
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 706 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 765
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 766 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKM 824
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 825 EGRNFVYKMELLMSALS 841
>gi|90086211|dbj|BAE91658.1| unnamed protein product [Macaca fascicularis]
Length = 651
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSGVLQDNKWSHLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ K+ELLM++L+
Sbjct: 631 EGRNFVYKVELLMSALS 647
>gi|344287790|ref|XP_003415635.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Loxodonta africana]
Length = 651
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G +V + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKVLVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFREVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|355701761|gb|AES01784.1| mediator complex subunit 17 [Mustela putorius furo]
Length = 615
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 476 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 535
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 536 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFREVQWNKM 594
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 595 EGRNFVYKMELLMSALS 611
>gi|21450345|ref|NP_659182.1| mediator of RNA polymerase II transcription subunit 17 [Mus
musculus]
gi|81879228|sp|Q8VCD5.1|MED17_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 6; Short=CRSP complex
subunit 6; AltName: Full=Mediator complex subunit 17;
AltName: Full=Thyroid hormone receptor-associated
protein complex 80 kDa component
gi|18043546|gb|AAH20185.1| Mediator complex subunit 17 [Mus musculus]
gi|26328867|dbj|BAC28172.1| unnamed protein product [Mus musculus]
gi|26339770|dbj|BAC33548.1| unnamed protein product [Mus musculus]
gi|74191548|dbj|BAE30349.1| unnamed protein product [Mus musculus]
gi|148693069|gb|EDL25016.1| cofactor required for Sp1 transcriptional activation, subunit 6
[Mus musculus]
Length = 649
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ ++S
Sbjct: 512 LSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVAS 571
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
P GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KMEG
Sbjct: 572 PSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKMEG 630
Query: 120 KNFLNKMELLMASLT 134
+NF+ KMELLM++L+
Sbjct: 631 RNFVYKMELLMSALS 645
>gi|13278534|gb|AAH04062.1| Med17 protein [Mus musculus]
Length = 566
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ ++S
Sbjct: 429 LSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVAS 488
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
P GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KMEG
Sbjct: 489 PSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKMEG 547
Query: 120 KNFLNKMELLMASLT 134
+NF+ KMELLM++L+
Sbjct: 548 RNFVYKMELLMSALS 562
>gi|194213344|ref|XP_001491471.2| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Equus caballus]
Length = 651
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 572 ASPNGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFREVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|417403637|gb|JAA48617.1| Putative vitamin d3 receptor [Desmodus rotundus]
Length = 651
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW L GPFKEV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNYLRGPFKEVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|410972433|ref|XP_003992664.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Felis catus]
Length = 651
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 572 ASPSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFREVQWNKM 630
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 631 EGRNFVYKMELLMSALS 647
>gi|431916505|gb|ELK16483.1| Mediator of RNA polymerase II transcription subunit 17 [Pteropus
alecto]
Length = 651
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ ++S
Sbjct: 514 LSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVAS 573
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
P GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W KMEG
Sbjct: 574 PSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWSKMEG 632
Query: 120 KNFLNKMELLMASLT 134
+NF+ KMELLM++L+
Sbjct: 633 RNFVYKMELLMSALS 647
>gi|349603713|gb|AEP99478.1| Mediator of RNA polymerase II transcription subunit 17-like
protein, partial [Equus caballus]
Length = 454
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 315 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 374
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKM 117
+SP GD ISVR P++G ++ + PR KD ++++ KW +L GPF+EV+W+KM
Sbjct: 375 ASPNGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWNHLRGPFREVQWNKM 433
Query: 118 EGKNFLNKMELLMASLT 134
EG+NF+ KMELLM++L+
Sbjct: 434 EGRNFVYKMELLMSALS 450
>gi|26332575|dbj|BAC30005.1| unnamed protein product [Mus musculus]
Length = 649
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS H+GLG +E +GNAS+ ++S
Sbjct: 512 LSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFGNHVGLGPIESIGNASAITVAS 571
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
P GD ISVR P++G ++ + PR KD ++++ KW +L GPFKEV+W+KMEG
Sbjct: 572 PSGDYAISVRNGPESGSKIMVQF-PRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKMEG 630
Query: 120 KNFLNKMELLMASLT 134
+NF+ KMELLM++L+
Sbjct: 631 RNFVYKMELLMSALS 645
>gi|348522991|ref|XP_003449007.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Oreochromis niloticus]
Length = 642
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 96/135 (71%), Gaps = 4/135 (2%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ ++S
Sbjct: 506 LSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAVTVAS 565
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEG 119
P G+ ISVR P++G +V + PR K+ ++++ KW +L GP+KEV W KMEG
Sbjct: 566 PNGEYAISVRNGPESGCKV-LVQFPRSQIKELPKSDVIQDAKWSHLRGPYKEVHWSKMEG 624
Query: 120 KNFLNKMELLMASLT 134
+NF+ KMELLMA+LT
Sbjct: 625 RNFVYKMELLMAALT 639
>gi|410909574|ref|XP_003968265.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform 1 [Takifugu rubripes]
Length = 642
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 504 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGQVESIGNASAITV 563
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP G+ ISVR P++G +V I S K+ ++++ KW +L GP KEV+W KME
Sbjct: 564 ASPNGENAISVRNGPESGCKVLIQFPRSQSKELPKNDIIQDAKWSHLRGPSKEVQWSKME 623
Query: 119 GKNFLNKMELLMASLT 134
G+NF+ KMELLMA++T
Sbjct: 624 GRNFVYKMELLMAAMT 639
>gi|410909576|ref|XP_003968266.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform 2 [Takifugu rubripes]
Length = 650
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGQVESIGNASAITV 571
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP G+ ISVR P++G +V I S K+ ++++ KW +L GP KEV+W KME
Sbjct: 572 ASPNGENAISVRNGPESGCKVLIQFPRSQSKELPKNDIIQDAKWSHLRGPSKEVQWSKME 631
Query: 119 GKNFLNKMELLMASLT 134
G+NF+ KMELLMA++T
Sbjct: 632 GRNFVYKMELLMAAMT 647
>gi|432889346|ref|XP_004075231.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Oryzias latipes]
Length = 643
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 505 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 564
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP G+ ISVR P++G +V + S K+ ++++ KW +L GP KEV W KME
Sbjct: 565 ASPNGEFAISVRNGPESGCKVLVQFPRSQSKELPKSDVIQDSKWSHLRGPHKEVHWSKME 624
Query: 119 GKNFLNKMELLMASLT 134
G+NF+ KMELLMA+LT
Sbjct: 625 GRNFVYKMELLMAALT 640
>gi|117606149|ref|NP_001071042.1| mediator of RNA polymerase II transcription subunit 17 [Danio
rerio]
gi|123884354|sp|Q08BY1.1|MED17_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 6; Short=CRSP complex
subunit 6; AltName: Full=Mediator complex subunit 17
gi|115313857|gb|AAI24508.1| Cofactor required for Sp1 transcriptional activation, subunit 6
[Danio rerio]
gi|182891978|gb|AAI65631.1| Crsp6 protein [Danio rerio]
Length = 643
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG +E +GNASS +
Sbjct: 505 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGSIESIGNASSITV 564
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP G+ ISVR P++G +V + S KD V++ KW L G +EV WD+ME
Sbjct: 565 ASPSGEYAISVRNGPESGCKVLVQFPRSQAKDAGRSDAVQDGKWTQLRGAHREVHWDRME 624
Query: 119 GKNFLNKMELLMASLT 134
GKNF+ KMELLMA+LT
Sbjct: 625 GKNFVYKMELLMAALT 640
>gi|47194984|emb|CAF89178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 71 VTLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 130
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP G+ ISVR P++G +V I S K+ +V++ KW +L GP KEV W +ME
Sbjct: 131 ASPNGENAISVRNGPESGCRVLIQFPRSQSKELPKNDVVQDAKWSHLRGPSKEVHWSRME 190
Query: 119 GKNFLNKMELLMASLT 134
G+NF+ KMELLMA++T
Sbjct: 191 GRNFVYKMELLMAAMT 206
>gi|47213573|emb|CAF95555.1| unnamed protein product [Tetraodon nigroviridis]
Length = 641
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 504 VTLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITV 563
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP G+ ISVR P++G +V I S K+ +V++ KW +L GP KEV W +ME
Sbjct: 564 ASPNGENAISVRNGPESGCRVLIQFPRSQSKELPKNDVVQDAKWSHLRGPSKEVHWSRME 623
Query: 119 GKNFLNKMELLMASLT 134
G+NF+ KMELLMA++T
Sbjct: 624 GRNFVYKMELLMAAMT 639
>gi|260804573|ref|XP_002597162.1| hypothetical protein BRAFLDRAFT_276188 [Branchiostoma floridae]
gi|229282425|gb|EEN53174.1| hypothetical protein BRAFLDRAFT_276188 [Branchiostoma floridae]
Length = 623
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LSY+ ELRDL+ Q QHQ++ ++ L+K MGWQ L S H+G G VE LGNAS ++
Sbjct: 488 ITLSYDEHELRDLLLHQACQHQVNTVQSLSKMMGWQILHLSNHVGTGPVEKLGNASGIMM 547
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRK--DFFCGQLVKERKWENLGGPFKEVRWDKME 118
+SP GDR+ISVR P G V++ + +K + + ++K+ KW+ +GG FK V+WDK +
Sbjct: 548 ASPKGDRVISVRNSPSLGPLVSVQLTRQKGCETWRSDVIKDTKWDQVGGSFKPVQWDKAK 607
Query: 119 GKNFLNKMELLMASLT 134
G+NF+NK+ELLM LT
Sbjct: 608 GRNFVNKIELLMGCLT 623
>gi|291190041|ref|NP_001167330.1| Mediator of RNA polymerase II transcription subunit 17 [Salmo
salar]
gi|223649234|gb|ACN11375.1| Mediator of RNA polymerase II transcription subunit 17 [Salmo
salar]
Length = 645
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ +
Sbjct: 507 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGSVESIGNASAITV 566
Query: 61 SSPMGDRMISVRCEPQAGIQVAIA--HSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+S G+ ISVR P++G +V + S K+ ++++ KW +L GP+KEV W KME
Sbjct: 567 ASSNGEYAISVRNGPESGCKVLVQFPRSQSKELPKSDVIQDGKWNHLRGPYKEVHWSKME 626
Query: 119 GKNFLNKMELLMASLT 134
G+NF+ KMELLMA+LT
Sbjct: 627 GRNFVYKMELLMAALT 642
>gi|291229290|ref|XP_002734608.1| PREDICTED: mediator complex subunit 17-like, partial [Saccoglossus
kowalevskii]
Length = 204
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 97/137 (70%), Gaps = 3/137 (2%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
++LSYE QE+++ + QI QHQI++++ L+K MGWQ L SS HLG+G +E +GNA+ ++
Sbjct: 68 IQLSYEEQEIKNFLHTQITQHQITSIQALSKVMGWQVLQSSTHLGVGHMEKIGNAAGIMM 127
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFC---GQLVKERKWENLGGPFKEVRWDKM 117
SP G+R++++R P +G++VA+ + ++ + KW+NLGG FKEV D+M
Sbjct: 128 ISPTGERVLAIRNGPNSGVRVAVQIPKNQQNGTESRSDVIVDPKWDNLGGYFKEVDMDRM 187
Query: 118 EGKNFLNKMELLMASLT 134
+G+N +NK+ELLMA+L
Sbjct: 188 KGRNLVNKIELLMAALN 204
>gi|322783079|gb|EFZ10751.1| hypothetical protein SINV_01962 [Solenopsis invicta]
Length = 69
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 68 MISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGKNFLNKME 127
MI+VRCEPQ G+QVAIAHSPRKDFF GQLV+ERKWENLGG FKEVRWDKMEGKNFLNKME
Sbjct: 1 MIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKME 60
Query: 128 LLMASLTS 135
LLMASLTS
Sbjct: 61 LLMASLTS 68
>gi|449513012|ref|XP_002199910.2| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Taeniopygia guttata]
Length = 121
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 87/118 (73%), Gaps = 4/118 (3%)
Query: 20 QHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSSPMGDRMISVRCEPQAGI 79
QHQ+ A+++LAK MGW LS S H+GLG VE +GNAS+ ++SP GD ISVR P++G
Sbjct: 3 QHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITVASPNGDYAISVRNGPESGS 62
Query: 80 QVAIAHSPR---KDFFCGQLVKERKWENLGGPFKEVRWDKMEGKNFLNKMELLMASLT 134
+V + PR KD G ++++ KW +L GPFKEV+W+KMEG+NF+ KMELLMA+LT
Sbjct: 63 KVMVQF-PRSQCKDLPKGDVLQDSKWNHLRGPFKEVQWNKMEGRNFVYKMELLMAALT 119
>gi|405973913|gb|EKC38602.1| Mediator of RNA polymerase II transcription subunit 17 [Crassostrea
gigas]
Length = 654
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Query: 3 LSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSS 62
LS+E +EL+D I Q+ QHQIS + LA+ MGWQ +S+S +G+ +E G ASS +L++
Sbjct: 516 LSFEEKELQDFIMWQVSQHQISVSQNLARLMGWQIMSTSTAMGVSDLESSGTASSLILAA 575
Query: 63 PMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGKNF 122
P +R+++++ P +GI+V + S +KD ++ + KW+++G +++V K EG+NF
Sbjct: 576 PNKERILAIKSGPSSGIKVFLQQS-QKDNKNRVILPDDKWQSVGADYQQVDLSKFEGRNF 634
Query: 123 LNKMELLMASLT 134
+K+ELL+A+ +
Sbjct: 635 ASKLELLLATFS 646
>gi|390336615|ref|XP_783830.3| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform 2 [Strongylocentrotus purpuratus]
gi|390336617|ref|XP_003724387.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform 1 [Strongylocentrotus purpuratus]
Length = 638
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+KL++ QELRDLI C + QHQ+ + +L K M L ++ H+G G LG+ S+ +
Sbjct: 499 VKLTHHLQELRDLITCMVSQHQVLILAQLCKHMSMHVLQNNLHVGTGPAAKLGSTSAIMF 558
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHS------PRKDFFCGQLVKERKWENLGGPFKEVRW 114
++P G + ++VR +P GI V + P+ + +V + KWENL F+EV
Sbjct: 559 TTPNGQKTVAVRSDPLEGITVMVQGCKASPLLPQPEIL-SDVVTDEKWENLPKGFREVDM 617
Query: 115 DKMEGKNFLNKMELLMASL 133
+M G+NF++KME+L+A+L
Sbjct: 618 ARMPGRNFIHKMEMLLATL 636
>gi|241640821|ref|XP_002409302.1| hypothetical protein IscW_ISCW007804 [Ixodes scapularis]
gi|215501329|gb|EEC10823.1| hypothetical protein IscW_ISCW007804 [Ixodes scapularis]
Length = 114
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 67 RMISVRCEPQAGIQVAIAHSPRK-DFFCGQLVKERKWENLGGPFKEVRWDKMEGKNFLNK 125
R+ISVRC PQ+GI+V+++ SP++ DF+ LV++RKW NL G F+EV +M+G++FL+K
Sbjct: 45 RVISVRCGPQSGIEVSVSSSPQQQDFYPSTLVRDRKWHNLSGSFREVCLARMQGRSFLSK 104
Query: 126 MELLMASLTS 135
ME LMA+LT+
Sbjct: 105 MEHLMAALTT 114
>gi|156357299|ref|XP_001624158.1| predicted protein [Nematostella vectensis]
gi|156210917|gb|EDO32058.1| predicted protein [Nematostella vectensis]
Length = 645
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 8 QELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSSPMGDR 67
Q+L+D + Q+ QH++ +A +GW + S H+ G VE G+A+ +++SP DR
Sbjct: 518 QDLKDFLLSQVAQHRVLVAHTMAVSLGWHVIHHSNHVATGPVEYQGHAAGLVVTSPDSDR 577
Query: 68 MISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKMEGKNFLNKME 127
I+VR P +GI VA+ PR + + KW +G F V M G+ F+ KM
Sbjct: 578 SIAVRAGPSSGISVAV-RRPRGSL--PDFLSDPKWSLVGSEFVSVDLQSMPGRTFVQKMY 634
Query: 128 LLMASLTSL 136
LL+ SL
Sbjct: 635 LLLGVEMSL 643
>gi|432090706|gb|ELK24045.1| Mediator of RNA polymerase II transcription subunit 17 [Myotis
davidii]
Length = 591
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ +
Sbjct: 512 ITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITV 571
Query: 61 SSPMGDRMIS 70
+SP GD IS
Sbjct: 572 ASPSGDYAIS 581
>gi|355752544|gb|EHH56664.1| hypothetical protein EGM_06124 [Macaca fascicularis]
Length = 574
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 20 QHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLLSSPMGDRMIS 70
QHQ+ A+++LAK MGWQ LS S H+GLG +E +GNAS+ ++SP GD IS
Sbjct: 517 QHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVASPSGDYAIS 567
>gi|198423211|ref|XP_002128356.1| PREDICTED: similar to mediator complex subunit 17 [Ciona
intestinalis]
Length = 653
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
+ LS E +L I HQ+ ++ L+K + W L + H G+ + N + LL
Sbjct: 504 LTLSTEYSDLYLYFITLISSHQLQTVQALSKILNWSLLHMAPHAGVCINNSVINRGTMLL 563
Query: 61 SSPMGDRMISVRCEPQAGIQVAIAHSPRKDF-------FCGQLVKE--------RKWENL 105
+SP D +S+ +I+H+ R F Q+ E K+ L
Sbjct: 564 ASPSNDSKLSLSITHNT--DHSISHNVRIQFSKSLDLKLNNQVFTETQDNLTLSSKYLGL 621
Query: 106 GGPFKEVRWDKMEGKNFLNKMELLMASLTS 135
GG +K V W + G++F+ KME L+ SL S
Sbjct: 622 GGEWKIVNWQNLHGRHFVQKMETLLTSLVS 651
>gi|427792041|gb|JAA61472.1| Putative vitamin d3 receptor, partial [Rhipicephalus pulchellus]
Length = 547
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 32/39 (82%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLS 39
++LSYEPQELR L+ Q+ QHQ+S+++ LAK +GW+ LS
Sbjct: 509 IQLSYEPQELRFLLMAQVAQHQVSSVQTLAKFVGWKVLS 547
>gi|313229466|emb|CBY18280.1| unnamed protein product [Oikopleura dioica]
Length = 642
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
++L + ELR LI ++ Q++ + L + + W LSSS CLL
Sbjct: 507 VELGTDTAELRRLIEGELLSLQVACLAGLVRIIDWTVLSSS--------------KGCLL 552
Query: 61 SSPMGDRM-----ISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGP-FKEVRW 114
+P +SVR E + I+V I L+ + KW+ L ++EV W
Sbjct: 553 LAPPASSQSITGRVSVRTENRK-IRVYIEEKTPSATLVSDLLTDPKWQVLTHTEWREVDW 611
Query: 115 DKMEGKNFLNKMELLMASLTSLI 137
+K+ G NF+ KM+L+++ L +
Sbjct: 612 EKLAGANFVGKMDLMLSCLCKTV 634
>gi|313244860|emb|CBY42407.1| unnamed protein product [Oikopleura dioica]
Length = 627
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLSSSAHLGLGGVEPLGNASSCLL 60
++L + ELR LI ++ Q++ + L + + W LSSS CLL
Sbjct: 507 VELGTDTAELRRLIEGELLSLQVACLAGLVRIIDWTVLSSS--------------KGCLL 552
Query: 61 SSPMGDRM-----ISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGP-FKEVRW 114
+P +SVR E + I+V I L+ + KW+ L ++EV W
Sbjct: 553 LAPPASSQSITGRVSVRTENRK-IRVYIEEKTPSATLVSDLLTDPKWQVLTNTEWREVDW 611
Query: 115 DKMEGKNFLNKMELLM 130
+K+ G NF+ KM+L++
Sbjct: 612 EKLAGANFVGKMDLML 627
>gi|349803091|gb|AEQ17018.1| putative mediator of rna polymerase ii transcription subunit 17
[Pipa carvalhoi]
Length = 141
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 1 MKLSYEPQELRDLIFCQIYQHQISAMEKLAKCMGWQFLS 39
+ LS++ QEL+D + Q+ QHQ+ A+++LAK MGW LS
Sbjct: 102 ITLSHQEQELQDFLLSQMSQHQVLAVQQLAKVMGWHVLS 140
>gi|256084648|ref|XP_002578539.1| transcriptional co-activator crsp77-related [Schistosoma mansoni]
Length = 792
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 2 KLSYEPQELRDLIFCQIYQHQISAMEKLA-KCMGWQFLSSSAHLGLGGVEPLGNASSC-- 58
+L + L+D++ Q+ Q++ ++ LA K +GW L ++ + E +G+
Sbjct: 660 RLGMDLSRLKDVLNNQVLYTQMNYIDILAIKILGWVRLGNNPFSAVANPEEIGDGPVIVK 719
Query: 59 LLSSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+ +SP +I +R I++ ++ D+ Q + + K F+EV M
Sbjct: 720 MFASPSAKYLICLRASAVMDIRMFVSRCSPCDY---QFITDHKDIFSNQDFREVSLSHMY 776
Query: 119 GKNFLNKMELLMASLT 134
GK+ ++K+E LM L+
Sbjct: 777 GKSLVSKVEALMTLLS 792
>gi|256084650|ref|XP_002578540.1| transcriptional co-activator crsp77-related [Schistosoma mansoni]
Length = 652
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 2 KLSYEPQELRDLIFCQIYQHQISAMEKLA-KCMGWQFLSSSAHLGLGGVEPLGNASSC-- 58
+L + L+D++ Q+ Q++ ++ LA K +GW L ++ + E +G+
Sbjct: 520 RLGMDLSRLKDVLNNQVLYTQMNYIDILAIKILGWVRLGNNPFSAVANPEEIGDGPVIVK 579
Query: 59 LLSSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+ +SP +I +R I++ ++ D+ Q + + K F+EV M
Sbjct: 580 MFASPSAKYLICLRASAVMDIRMFVSRCSPCDY---QFITDHKDIFSNQDFREVSLSHMY 636
Query: 119 GKNFLNKMELLMASLT 134
GK+ ++K+E LM L+
Sbjct: 637 GKSLVSKVEALMTLLS 652
>gi|353228688|emb|CCD74859.1| transcriptional co-activator crsp77-related [Schistosoma mansoni]
Length = 792
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 2 KLSYEPQELRDLIFCQIYQHQISAMEKLA-KCMGWQFLSSSAHLGLGGVEPLGNASSC-- 58
+L + L+D++ Q+ Q++ ++ LA K +GW L ++ + E +G+
Sbjct: 660 RLGMDLSRLKDVLNNQVLYTQMNYIDILAIKILGWVRLGNNPFSAVANPEEIGDGPVIVK 719
Query: 59 LLSSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+ +SP +I +R I++ ++ D+ Q + + K F+EV M
Sbjct: 720 MFASPSAKYLICLRASAVMDIRMFVSRCSPCDY---QFITDHKDIFSNQDFREVFLSHMY 776
Query: 119 GKNFLNKMELLMASLT 134
GK+ ++K+E LM L+
Sbjct: 777 GKSLVSKVEALMTLLS 792
>gi|353228689|emb|CCD74860.1| transcriptional co-activator crsp77-related [Schistosoma mansoni]
Length = 652
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 2 KLSYEPQELRDLIFCQIYQHQISAMEKLA-KCMGWQFLSSSAHLGLGGVEPLGNASSC-- 58
+L + L+D++ Q+ Q++ ++ LA K +GW L ++ + E +G+
Sbjct: 520 RLGMDLSRLKDVLNNQVLYTQMNYIDILAIKILGWVRLGNNPFSAVANPEEIGDGPVIVK 579
Query: 59 LLSSPMGDRMISVRCEPQAGIQVAIAHSPRKDFFCGQLVKERKWENLGGPFKEVRWDKME 118
+ +SP +I +R I++ ++ D+ Q + + K F+EV M
Sbjct: 580 MFASPSAKYLICLRASAVMDIRMFVSRCSPCDY---QFITDHKDIFSNQDFREVFLSHMY 636
Query: 119 GKNFLNKMELLMASLT 134
GK+ ++K+E LM L+
Sbjct: 637 GKSLVSKVEALMTLLS 652
>gi|170585390|ref|XP_001897467.1| CAP-Gly domain containing protein [Brugia malayi]
gi|158595146|gb|EDP33719.1| CAP-Gly domain containing protein [Brugia malayi]
Length = 1017
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 85 HSPRKDF-FCGQLVKERKWEN-----LGGPFKEVRWDKMEGKNFLNKMELLMASLTSLIE 138
H RKD + E+K N L G ++V+ D ++ L KME+ A L L E
Sbjct: 567 HLKRKDAEMVEKTENEKKEHNTEVSRLNGELRQVQNDSIQLHEQLRKMEIEKAKLMELQE 626
Query: 139 GI--------TVIAKLLSSRDRREKEDRIGESNESILDKICPGRESNLWPSASKVDELPT 190
+ T L S + E E R ES + IL +ES L + SK+DEL
Sbjct: 627 SLENSNREFLTNTKSLESQKIELEGELRQKESEKEILRSSLTKKESELSSAKSKLDELSG 686
Query: 191 KLTRL 195
++ +L
Sbjct: 687 QIDKL 691
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,126,609,842
Number of Sequences: 23463169
Number of extensions: 116365481
Number of successful extensions: 242026
Number of sequences better than 100.0: 106
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 241850
Number of HSP's gapped (non-prelim): 107
length of query: 204
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 68
effective length of database: 9,168,204,383
effective search space: 623437898044
effective search space used: 623437898044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)