BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5791
(81 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340713035|ref|XP_003395057.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 17-like [Bombus terrestris]
Length = 644
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHPSSGP+GPSKRRC+AGPT ADRYELLE+TKS+ L
Sbjct: 380 VHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTL 425
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNISVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNISVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|380011201|ref|XP_003689699.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 17-like [Apis florea]
Length = 644
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHPSSGP+GPSKRRC+AGPT ADRYELLE+TKS+ L
Sbjct: 380 VHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTL 425
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNISVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNISVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|66507375|ref|XP_394516.2| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Apis mellifera]
Length = 644
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHPSSGP+GPSKRRC+AGPT ADRYELLE+TKS+ L
Sbjct: 380 VHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTL 425
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNISVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNISVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|383847603|ref|XP_003699442.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Megachile rotundata]
Length = 644
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHPSSGP+GPSKRRC+AGPT ADRYELLE+TKS+ L
Sbjct: 380 VHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTL 425
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVN+SVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNVSVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|350419682|ref|XP_003492267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Bombus impatiens]
Length = 644
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHPSSGP+GPSKRRC+AGPT ADRYELLE+TKS+ L
Sbjct: 380 VHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTL 425
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNISVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNISVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|156551237|ref|XP_001605806.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Nasonia vitripennis]
Length = 641
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 44/46 (95%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHPSSGP+GPSKRRC+AGPT ADR+ELLE+TKS+ L
Sbjct: 377 VHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRHELLEMTKSQTL 422
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVN+SVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNVSVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|307212331|gb|EFN88135.1| Mediator of RNA polymerase II transcription subunit 17
[Harpegnathos saltator]
Length = 646
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 42/46 (91%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHP PHPSSGP+GPSKRRC+AGPT ADRYELLE+ KS+ L
Sbjct: 382 VHHKNTHHPLPHPSSGPLGPSKRRCLAGPTAADRYELLEMAKSQTL 427
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNIS+EAP+EN IQEISYDGQEIYQ LS+N + K
Sbjct: 4 SVNISIEAPIENQIQEISYDGQEIYQAPLTLSENLAKIAQK 44
>gi|91080451|ref|XP_969541.1| PREDICTED: similar to AGAP009141-PA [Tribolium castaneum]
gi|270005569|gb|EFA02017.1| hypothetical protein TcasGA2_TC007640 [Tribolium castaneum]
Length = 639
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHHKNTHHPFPHP++GP+GPSK+R +AGP ADRYELLE+TKSE L
Sbjct: 374 VHHKNTHHPFPHPATGPLGPSKKRMLAGPMAADRYELLEMTKSETL 419
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVEAP+EN IQEI+YDG EIYQ
Sbjct: 4 SVNISVEAPIENQIQEITYDGTEIYQ 29
>gi|193641165|ref|XP_001946953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Acyrthosiphon pisum]
Length = 642
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHH+NTH PFPHPSSGP+GPSKRR +AGP ADR+ELLE++KS+ L
Sbjct: 377 VHHRNTHQPFPHPSSGPLGPSKRRAVAGPNAADRFELLEMSKSQTL 422
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 4/34 (11%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDN 31
SVNIS+E ENIIQEISYDGQEIYQ +SDN
Sbjct: 6 SVNISIETQAENIIQEISYDGQEIYQPALSMSDN 39
>gi|242014384|ref|XP_002427871.1| CRSP complex subunit, putative [Pediculus humanus corporis]
gi|212512340|gb|EEB15133.1| CRSP complex subunit, putative [Pediculus humanus corporis]
Length = 651
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 41/46 (89%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHH NTHHPFPHPSSGPIGPSK+R +AGPT +DR+ELLE+TKS L
Sbjct: 386 VHHNNTHHPFPHPSSGPIGPSKKRILAGPTASDRHELLEMTKSYTL 431
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHKNTHHPFP 45
SVNISVEAP+EN IQEISYDG EIYQ +S+N + K + P
Sbjct: 4 SVNISVEAPIENQIQEISYDGTEIYQTPLSMSENLAKLAQKIDFNKIP 51
>gi|307172011|gb|EFN63605.1| Mediator of RNA polymerase II transcription subunit 17 [Camponotus
floridanus]
Length = 645
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 42/46 (91%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+ HPFPHP+SGP+GPSKRR +AGPT AD+YELLE+TKS+ L
Sbjct: 381 VHYKNSQHPFPHPASGPLGPSKRRYLAGPTAADKYELLEMTKSQTL 426
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNISVEAP+EN IQEISYDGQEIYQ LS+N + K
Sbjct: 4 SVNISVEAPIENQIQEISYDGQEIYQAPLTLSENLAKIAQK 44
>gi|332022369|gb|EGI62681.1| Mediator of RNA polymerase II transcription subunit 17 [Acromyrmex
echinatior]
Length = 646
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 42/46 (91%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+ N++HPFPHP+SGP+GPSKRR +AGPT ADRYELLE+TKS+ L
Sbjct: 382 VHYNNSNHPFPHPASGPLGPSKRRYVAGPTAADRYELLEMTKSQTL 427
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNISVEAP+EN IQEI+YDGQEIYQ LS+N + K
Sbjct: 4 SVNISVEAPIENQIQEITYDGQEIYQAPLTLSENLAKIAQK 44
>gi|357620752|gb|EHJ72824.1| hypothetical protein KGM_07165 [Danaus plexippus]
Length = 640
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VHH NTHHPFPHP++GP+GPSKRR +AGP GADRYEL+E+++ + L
Sbjct: 375 VHHSNTHHPFPHPATGPLGPSKRRSLAGPMGADRYELMEMSREQSL 420
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ----LSDNTFMVHHK 38
SVNIS+EAP+EN IQEI+YDGQEIYQ +S+N + K
Sbjct: 4 SVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQK 44
>gi|157125041|ref|XP_001654224.1| mediator complex, 80kD-subunit, putative [Aedes aegypti]
gi|121957331|sp|Q17JT4.1|MED17_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Mediator complex subunit 17
gi|108882753|gb|EAT46978.1| AAEL001883-PA [Aedes aegypti]
Length = 645
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 40/45 (88%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
HHKNTHHPFPHP+S P+GPSK+R +AGP+ DRYELLE+TKS+ L
Sbjct: 379 HHKNTHHPFPHPASAPLGPSKKRMLAGPSAFDRYELLEMTKSQTL 423
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 1 MSVNISVEAPVENIIQEISYDGQEIYQL 28
+S NISVEAP+E+ IQEI+YDG EIYQL
Sbjct: 3 VSANISVEAPIESQIQEIAYDGTEIYQL 30
>gi|170029411|ref|XP_001842586.1| CRSP complex subunit 6 [Culex quinquefasciatus]
gi|167862417|gb|EDS25800.1| CRSP complex subunit 6 [Culex quinquefasciatus]
Length = 647
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 40/45 (88%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
HHKNTHHPFPHP+S P+GPSK+R +AGP+ DRYELLE+TKS+ L
Sbjct: 381 HHKNTHHPFPHPASAPLGPSKKRMLAGPSAFDRYELLEMTKSQTL 425
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 1 MSVNISVEAPVENIIQEISYDGQEIYQL 28
+S NISVEAP+E+ IQEI+YDG EIYQL
Sbjct: 3 VSTNISVEAPIESQIQEIAYDGTEIYQL 30
>gi|58393212|ref|XP_319901.2| AGAP009141-PA [Anopheles gambiae str. PEST]
gi|74800788|sp|Q7PVZ2.2|MED17_ANOGA RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Mediator complex subunit 17
gi|55235480|gb|EAA14731.2| AGAP009141-PA [Anopheles gambiae str. PEST]
Length = 645
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
HHKNTHHPFPHP+SGP+GPSK+R +AGP+ DR+ELLE+TKS+ L
Sbjct: 379 HHKNTHHPFPHPASGPLGPSKKRMLAGPSAYDRHELLEMTKSQTL 423
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 25/28 (89%)
Query: 1 MSVNISVEAPVENIIQEISYDGQEIYQL 28
+S NISVEAP+EN IQEI+YDG EIYQL
Sbjct: 3 LSANISVEAPIENQIQEIAYDGTEIYQL 30
>gi|312384274|gb|EFR29037.1| hypothetical protein AND_02330 [Anopheles darlingi]
Length = 754
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
HHKNTHHPFPHP+SGP+GPSK+R +AGP+ DR+ELLE+TKS+ L
Sbjct: 488 HHKNTHHPFPHPASGPLGPSKKRMLAGPSAFDRHELLEMTKSQTL 532
>gi|195107347|ref|XP_001998275.1| GI23722 [Drosophila mojavensis]
gi|193914869|gb|EDW13736.1| GI23722 [Drosophila mojavensis]
Length = 647
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH KN+HHPFPHP+S P+GPSK+R IAGPT ADR LLE+TK++ +
Sbjct: 379 VHFKNSHHPFPHPASAPLGPSKKRMIAGPTAADRESLLEMTKTQTI 424
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI+YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREITYDGVEMYQ 29
>gi|194744871|ref|XP_001954916.1| GF18510 [Drosophila ananassae]
gi|190627953|gb|EDV43477.1| GF18510 [Drosophila ananassae]
Length = 642
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 40/46 (86%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GPSK+R +AGPT ADR LLE+TK++ +
Sbjct: 374 VHYKNSHHPFPHPASAPLGPSKKRMLAGPTAADRETLLEMTKTQTI 419
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|195055229|ref|XP_001994522.1| GH15742 [Drosophila grimshawi]
gi|193892285|gb|EDV91151.1| GH15742 [Drosophila grimshawi]
Length = 648
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 40/46 (86%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GPSK+R +AGPT ADR LL++TK++ +
Sbjct: 380 VHYKNSHHPFPHPASAPLGPSKKRMLAGPTAADREALLDMTKTQTI 425
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI+YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIAYDGTELYQ 29
>gi|195389813|ref|XP_002053568.1| GJ23280 [Drosophila virilis]
gi|194151654|gb|EDW67088.1| GJ23280 [Drosophila virilis]
Length = 646
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 40/46 (86%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GPSK+R +AGPT ADR LL++TK++ +
Sbjct: 378 VHYKNSHHPFPHPASAPLGPSKKRMLAGPTAADREALLDMTKTQTI 423
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI+YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIAYDGTELYQ 29
>gi|195444779|ref|XP_002070025.1| GK11248 [Drosophila willistoni]
gi|194166110|gb|EDW81011.1| GK11248 [Drosophila willistoni]
Length = 645
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHPSS P+GPSK+R +AGP ADR L+++TKS+ +
Sbjct: 377 VHYKNSHHPFPHPSSAPLGPSKKRMMAGPMAADRETLMDMTKSQTI 422
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 5 SVNISVETTCENQIREIGYDGTELYQ 30
>gi|194900282|ref|XP_001979686.1| GG22704 [Drosophila erecta]
gi|190651389|gb|EDV48644.1| GG22704 [Drosophila erecta]
Length = 642
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GP+K+R +AGP ADR LL++TKS+ +
Sbjct: 374 VHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTI 419
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|21357131|ref|NP_650686.1| mediator complex subunit 17 [Drosophila melanogaster]
gi|74947827|sp|Q9VEC1.1|MED17_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
17; AltName: Full=Mediator complex subunit 17; AltName:
Full=dMED17; AltName: Full=dTRAP80
gi|7533040|gb|AAF63336.1|AF244916_1 mediator transcriptional cofactor TRAP80 [Drosophila melanogaster]
gi|9937474|gb|AAG02460.1|AF289995_1 thyroid hormone receptor-associated protein TRAP80 [Drosophila
melanogaster]
gi|7300347|gb|AAF55506.1| mediator complex subunit 17 [Drosophila melanogaster]
gi|21428742|gb|AAM50031.1| SD10038p [Drosophila melanogaster]
gi|220942342|gb|ACL83714.1| MED17-PA [synthetic construct]
Length = 642
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GP+K+R +AGP ADR LL++TKS+ +
Sbjct: 374 VHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTI 419
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|195497545|ref|XP_002096146.1| GE25518 [Drosophila yakuba]
gi|194182247|gb|EDW95858.1| GE25518 [Drosophila yakuba]
Length = 642
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GP+K+R +AGP ADR LL++TKS+ +
Sbjct: 374 VHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTI 419
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|195348943|ref|XP_002041006.1| GM15283 [Drosophila sechellia]
gi|194122611|gb|EDW44654.1| GM15283 [Drosophila sechellia]
Length = 642
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GP+K+R +AGP ADR LL++TKS+ +
Sbjct: 374 VHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTI 419
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|125778408|ref|XP_001359962.1| GA20720 [Drosophila pseudoobscura pseudoobscura]
gi|195157848|ref|XP_002019806.1| GL12596 [Drosophila persimilis]
gi|54639712|gb|EAL29114.1| GA20720 [Drosophila pseudoobscura pseudoobscura]
gi|194116397|gb|EDW38440.1| GL12596 [Drosophila persimilis]
Length = 642
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GP+K+R +AGP ADR LL++TKS+ +
Sbjct: 374 VHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTI 419
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|195569981|ref|XP_002102987.1| GD19210 [Drosophila simulans]
gi|194198914|gb|EDX12490.1| GD19210 [Drosophila simulans]
Length = 442
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH+KN+HHPFPHP+S P+GP+K+R +AGP ADR LL++TKS+ +
Sbjct: 174 VHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTI 219
>gi|321445336|gb|EFX60665.1| hypothetical protein DAPPUDRAFT_307686 [Daphnia pulex]
Length = 193
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 2 SVNISVEAPVENIIQEIS-YDGQEIYQLSDNTFM--VHHKNTHHPFPHPSSGPIGPSKRR 58
SV + PV N I+ D I + S + + VH KN P PHPSS P+GP+KRR
Sbjct: 110 SVGVEKRQPVSNSTSPIAKVDHNYILEHSLHQLLRQVHLKNVGQPVPHPSSAPLGPTKRR 169
Query: 59 CIAGPTGADRYELLELTK 76
+AGP DR ELL +TK
Sbjct: 170 RLAGPHAYDRDELLSMTK 187
>gi|443707195|gb|ELU02907.1| hypothetical protein CAPTEDRAFT_220719 [Capitella teleta]
Length = 642
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSE 78
+H KN++HP PHP S +G SK+R AGP R ELL++T SE
Sbjct: 369 LHFKNSYHPMPHPVSALLGVSKKRRNAGPQAFSRTELLDMTHSE 412
>gi|391344104|ref|XP_003746343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Metaseiulus occidentalis]
Length = 631
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
H+ HH PHP+S P+G +KR+ +AGP DR+ +++++K+E +
Sbjct: 367 HYNMLHHAMPHPASAPLGLNKRQRLAGPEAFDRHTIMDMSKNETI 411
>gi|405973913|gb|EKC38602.1| Mediator of RNA polymerase II transcription subunit 17 [Crassostrea
gigas]
Length = 654
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSE 78
H KN + P PHP + +G +K+R +AGP R +L++++ SE
Sbjct: 386 HFKNINFPAPHPVTALVGLTKKRRLAGPNALSRKQLMDMSDSE 428
>gi|260804573|ref|XP_002597162.1| hypothetical protein BRAFLDRAFT_276188 [Branchiostoma floridae]
gi|229282425|gb|EEN53174.1| hypothetical protein BRAFLDRAFT_276188 [Branchiostoma floridae]
Length = 623
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 35 VHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
VH N + PHP + P SK+R +AGP G DR + +L ++E L
Sbjct: 359 VHRSNLNPAPPHPVTAPFSSSKKRRVAGPQGLDRKQCTQLQETEGL 404
>gi|405973914|gb|EKC38603.1| Mediator of RNA polymerase II transcription subunit 17
[Crassostrea gigas]
Length = 385
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELT 75
H KN + P PHP + +G +K+R +AGP R +L+ ++
Sbjct: 19 HFKNINFPAPHPVTALVGLTKKRRLAGPNALSRKQLMHMS 58
>gi|195569983|ref|XP_002102988.1| GD19208 [Drosophila simulans]
gi|194198915|gb|EDX12491.1| GD19208 [Drosophila simulans]
Length = 118
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 2 SVNISVEAPVENIIQEISYDGQEIYQ 27
SVNISVE EN I+EI YDG E+YQ
Sbjct: 4 SVNISVETTCENQIREIGYDGTELYQ 29
>gi|427792041|gb|JAA61472.1| Putative vitamin d3 receptor, partial [Rhipicephalus pulchellus]
Length = 547
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
H+ H P P+SGP+G ++R +AGP DR L + SE +
Sbjct: 381 HYAFLHQGAPRPASGPVGVPRKRHLAGPHAHDRQRLRDSLHSETI 425
>gi|241998048|ref|XP_002433667.1| hypothetical protein IscW_ISCW024257 [Ixodes scapularis]
gi|215495426|gb|EEC05067.1| hypothetical protein IscW_ISCW024257 [Ixodes scapularis]
Length = 142
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYEL 71
H+ HH P P+S P+G KRR +AGP DR L
Sbjct: 96 HYSALHHATPRPASAPMGLGKRRHLAGPHAYDRQRL 131
>gi|427792027|gb|JAA61465.1| Putative vitamin d3 receptor, partial [Rhipicephalus pulchellus]
Length = 533
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 36 HHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEIL 80
H+ H P P+SGP+G ++R +AGP DR L + SE +
Sbjct: 420 HYAFLHQGAPRPASGPVGVPRKRHLAGPHAHDRQRLRDSLHSETI 464
>gi|156847245|ref|XP_001646507.1| hypothetical protein Kpol_1055p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156117185|gb|EDO18649.1| hypothetical protein Kpol_1055p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 1359
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 11 VENIIQEISYDGQEIYQLSDNTFMVHHKNTHHPFPHPSSGPIGPSKRRCI 60
+ENI++ Q+ Y +S + +V K+ + + P SGPIGP+K +C+
Sbjct: 819 LENILK-----SQKNYDISPISKLVDKKSREYSYTKPISGPIGPNKTKCL 863
>gi|424898634|ref|ZP_18322208.1| ATPase component of Mn/Zn ABC-type transporter [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182861|gb|EJC82900.1| ATPase component of Mn/Zn ABC-type transporter [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 249
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 30 DNTFMVHHKNTHHPFPHPSSGPIGPSKRRCIAGPTGADRYELLELTKSEI 79
DN + +H+ HP H SGP IAGP GA + LL+ E+
Sbjct: 8 DNLTVAYHR---HPALHHVSGPFAKGSLTAIAGPNGAGKSTLLKAIMGEL 54
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,361,560,479
Number of Sequences: 23463169
Number of extensions: 51977976
Number of successful extensions: 119015
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 118944
Number of HSP's gapped (non-prelim): 75
length of query: 81
length of database: 8,064,228,071
effective HSP length: 52
effective length of query: 29
effective length of database: 6,844,143,283
effective search space: 198480155207
effective search space used: 198480155207
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)