Query psy5791
Match_columns 81
No_of_seqs 40 out of 42
Neff 3.2
Searched_HMMs 13730
Date Fri Aug 16 18:04:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5791.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5791hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xx6a2 g.39.1.14 (A:143-191) 18.6 15 0.0011 19.5 0.5 12 17-28 28-39 (49)
2 d1pkha_ b.85.4.1 (A:) Bifuncti 17.5 13 0.00093 23.0 0.0 18 4-21 16-33 (182)
3 d1xtoa_ d.157.1.6 (A:) Coenzym 17.4 21 0.0015 21.5 1.0 10 17-26 293-302 (304)
4 d1wjpa3 g.37.1.1 (A:67-107) Zi 17.4 29 0.0021 18.3 1.5 16 34-49 25-40 (41)
5 d1v7wa1 a.102.1.4 (A:271-801) 15.0 47 0.0034 22.2 2.5 23 3-25 487-511 (531)
6 d1ogpa1 b.1.18.6 (A:263-389) S 15.0 20 0.0015 21.9 0.5 12 17-28 40-51 (127)
7 d2qw7a1 b.40.15.1 (A:1-96) Car 13.3 53 0.0038 19.6 2.1 17 12-28 79-95 (96)
8 d1wiga2 g.39.1.3 (A:33-73) Act 12.6 27 0.0019 18.6 0.5 12 20-31 10-21 (41)
9 d2a9da1 b.1.18.6 (A:344-466) S 12.6 27 0.0019 21.3 0.5 13 16-28 39-51 (123)
10 d2hd3a1 b.40.15.1 (A:1-95) Eth 11.5 39 0.0029 20.1 1.1 17 12-28 79-95 (95)
No 1
>d1xx6a2 g.39.1.14 (A:143-191) Thymidine kinase, TK1, C-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=18.55 E-value=15 Score=19.52 Aligned_cols=12 Identities=17% Similarity=0.227 Sum_probs=5.4
Q ss_pred eeecCceeeeec
Q psy5791 17 EISYDGQEIYQL 28 (81)
Q Consensus 17 Ei~~dG~E~y~~ 28 (81)
.|-+.|.|+|++
T Consensus 28 ~v~IGg~e~Y~~ 39 (49)
T d1xx6a2 28 VVLIGAMESYEA 39 (49)
T ss_dssp CC-----EEEEE
T ss_pred eEEECCCccEEe
Confidence 366789999986
No 2
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=17.50 E-value=13 Score=23.00 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=15.6
Q ss_pred eeeeecchhceeeeeecC
Q psy5791 4 NISVEAPVENIIQEISYD 21 (81)
Q Consensus 4 ~isiE~~~e~~vqEi~~d 21 (81)
+|.||...+.|||..+||
T Consensus 16 ~i~i~Pf~~~qiqp~s~D 33 (182)
T d1pkha_ 16 RIIIKPFNKDFVGPCSYD 33 (182)
T ss_dssp SSEEESCCGGGBCSSCEE
T ss_pred CeeEcCCCHHHcCccccc
Confidence 467888999999999888
No 3
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}
Probab=17.42 E-value=21 Score=21.49 Aligned_cols=10 Identities=40% Similarity=0.823 Sum_probs=8.3
Q ss_pred eeecCceeee
Q psy5791 17 EISYDGQEIY 26 (81)
Q Consensus 17 Ei~~dG~E~y 26 (81)
+|++||+++-
T Consensus 293 ~vA~DGm~i~ 302 (304)
T d1xtoa_ 293 EVAFDGMSIE 302 (304)
T ss_dssp EECCTTCEEE
T ss_pred EEeeCCCEEE
Confidence 6999999874
No 4
>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.41 E-value=29 Score=18.31 Aligned_cols=16 Identities=44% Similarity=0.598 Sum_probs=9.7
Q ss_pred hhhhcCCCCCCCCCCC
Q psy5791 34 MVHHKNTHHPFPHPSS 49 (81)
Q Consensus 34 E~H~qn~s~~~PhPas 49 (81)
|+|-||+-.|.-.++|
T Consensus 25 evhnqn~m~p~~~~ss 40 (41)
T d1wjpa3 25 EVHNQNNMAPTSGPSS 40 (41)
T ss_dssp HTSCCCCCCCCCCSCC
T ss_pred eeccccccCcccCCCC
Confidence 6788876555444443
No 5
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}
Probab=15.04 E-value=47 Score=22.22 Aligned_cols=23 Identities=30% Similarity=0.468 Sum_probs=17.2
Q ss_pred eeeeeec--chhceeeeeecCceee
Q psy5791 3 VNISVEA--PVENIIQEISYDGQEI 25 (81)
Q Consensus 3 v~isiE~--~~e~~vqEi~~dG~E~ 25 (81)
++|.|+. -....|.+|.+||+++
T Consensus 487 ~~i~v~~~~~~~~~~~~v~~nG~~v 511 (531)
T d1v7wa1 487 YHIQVENPDHVSKGVKSITLNGAPI 511 (531)
T ss_dssp EEEEEECTTCCSBCEEEEEETTEEE
T ss_pred EEEEEEECCCccceeEEEEECCEEc
Confidence 4566653 4567789999999986
No 6
>d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=15.03 E-value=20 Score=21.88 Aligned_cols=12 Identities=33% Similarity=0.484 Sum_probs=9.9
Q ss_pred eeecCceeeeec
Q psy5791 17 EISYDGQEIYQL 28 (81)
Q Consensus 17 Ei~~dG~E~y~~ 28 (81)
||++||=++|..
T Consensus 40 EVS~DgG~tW~~ 51 (127)
T d1ogpa1 40 DISLDGGKNWVE 51 (127)
T ss_dssp EEESSTTSSCEE
T ss_pred EEEeCCCCccEE
Confidence 889999888864
No 7
>d2qw7a1 b.40.15.1 (A:1-96) Carbon dioxide concentrating mechanism protein CcmL {Synechocystis sp. (strain PCC 6803) [TaxId: 1148]}
Probab=13.28 E-value=53 Score=19.56 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=14.1
Q ss_pred hceeeeeecCceeeeec
Q psy5791 12 ENIIQEISYDGQEIYQL 28 (81)
Q Consensus 12 e~~vqEi~~dG~E~y~~ 28 (81)
=-.|-++-+||+++|..
T Consensus 79 vGIVD~v~~~~~~~~~k 95 (96)
T d2qw7a1 79 VGIIDTVNVASGSLYNK 95 (96)
T ss_dssp EEEEEEEECSSSEEEEC
T ss_pred EEEEEEEEECCcEEEec
Confidence 34678999999999975
No 8
>d1wiga2 g.39.1.3 (A:33-73) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.60 E-value=27 Score=18.65 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=7.4
Q ss_pred cCceeeeecCcc
Q psy5791 20 YDGQEIYQLSDN 31 (81)
Q Consensus 20 ~dG~E~y~~p~~ 31 (81)
-+|.|+|.+--+
T Consensus 10 ~EGEEMYLQGs~ 21 (41)
T d1wiga2 10 AEGEEMYLQGSS 21 (41)
T ss_dssp CSSCCCEEETTE
T ss_pred cccceeeecCCc
Confidence 467777766443
No 9
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=12.56 E-value=27 Score=21.27 Aligned_cols=13 Identities=23% Similarity=0.616 Sum_probs=10.2
Q ss_pred eeeecCceeeeec
Q psy5791 16 QEISYDGQEIYQL 28 (81)
Q Consensus 16 qEi~~dG~E~y~~ 28 (81)
-||++||=.+|+.
T Consensus 39 VEVS~DgG~tW~~ 51 (123)
T d2a9da1 39 VDVSLDGGRTWKV 51 (123)
T ss_dssp EEEESBSSSSCEE
T ss_pred EEEEcCCCCccEE
Confidence 3799999888854
No 10
>d2hd3a1 b.40.15.1 (A:1-95) Ethanolamine utilization protein EutN {Escherichia coli [TaxId: 562]}
Probab=11.45 E-value=39 Score=20.10 Aligned_cols=17 Identities=29% Similarity=0.495 Sum_probs=13.5
Q ss_pred hceeeeeecCceeeeec
Q psy5791 12 ENIIQEISYDGQEIYQL 28 (81)
Q Consensus 12 e~~vqEi~~dG~E~y~~ 28 (81)
=-.|-+|..||+++|..
T Consensus 79 vGIVD~v~~~g~~~~~k 95 (95)
T d2hd3a1 79 IGIVDEVVSGGQVIFHK 95 (95)
T ss_dssp EEECCEEESTTCCSEEC
T ss_pred EEEEEEEEECCcEEEcC
Confidence 34578899999999963
Done!