Query psy5792
Match_columns 377
No_of_seqs 225 out of 1899
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 18:05:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5792.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5792hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a0p_A LRP6, LRP-6, low-densit 100.0 2.7E-62 9.3E-67 500.8 43.4 359 2-372 135-525 (628)
2 3s94_A LRP-6, low-density lipo 100.0 7.5E-62 2.6E-66 497.0 43.2 355 2-372 139-527 (619)
3 3v64_C Agrin; beta propeller, 100.0 1E-39 3.4E-44 312.0 30.2 238 118-372 2-251 (349)
4 3p5b_L Low density lipoprotein 100.0 2.1E-38 7.1E-43 308.3 34.1 243 114-372 37-296 (400)
5 3m0c_C LDL receptor, low-densi 100.0 4.6E-37 1.6E-41 320.3 33.9 241 116-372 351-608 (791)
6 4a0p_A LRP6, LRP-6, low-densit 100.0 2.2E-35 7.5E-40 301.8 44.8 304 16-370 80-480 (628)
7 3v65_B Low-density lipoprotein 100.0 5.4E-37 1.9E-41 297.0 29.2 241 115-372 42-294 (386)
8 3s94_A LRP-6, low-density lipo 100.0 8.2E-36 2.8E-40 304.6 37.9 320 2-371 52-483 (619)
9 3sov_A LRP-6, low-density lipo 100.0 2.9E-34 1E-38 270.6 26.6 211 148-372 3-214 (318)
10 3v64_C Agrin; beta propeller, 100.0 9.7E-33 3.3E-37 263.6 35.2 248 21-371 39-291 (349)
11 1ijq_A LDL receptor, low-densi 100.0 2.8E-32 9.4E-37 256.9 32.2 209 149-372 1-214 (316)
12 3p5b_L Low density lipoprotein 100.0 6.9E-32 2.4E-36 262.3 33.7 247 27-371 83-336 (400)
13 3sov_A LRP-6, low-density lipo 100.0 7.5E-32 2.6E-36 254.1 31.5 243 27-371 4-254 (318)
14 3v65_B Low-density lipoprotein 100.0 1E-31 3.6E-36 259.9 32.0 248 21-371 82-334 (386)
15 3m0c_C LDL receptor, low-densi 100.0 1.9E-31 6.4E-36 278.1 34.7 246 28-371 396-648 (791)
16 1ijq_A LDL receptor, low-densi 100.0 9E-31 3.1E-35 246.6 35.6 246 28-371 2-254 (316)
17 1n7d_A LDL receptor, low-densi 100.0 1.5E-33 5.2E-38 292.0 15.3 241 116-372 333-590 (699)
18 1npe_A Nidogen, entactin; glyc 100.0 2E-27 7E-32 217.5 32.6 245 28-372 2-256 (267)
19 1n7d_A LDL receptor, low-densi 100.0 1.5E-28 5.1E-33 254.5 14.0 246 28-371 378-630 (699)
20 1npe_A Nidogen, entactin; glyc 100.0 5E-26 1.7E-30 208.2 28.4 209 150-371 2-213 (267)
21 3s25_A Hypothetical 7-bladed b 99.9 8.5E-24 2.9E-28 197.3 28.9 272 12-361 10-300 (302)
22 3tc9_A Hypothetical hydrolase; 99.9 5.7E-23 1.9E-27 201.3 26.1 244 14-353 135-429 (430)
23 4hw6_A Hypothetical protein, I 99.9 3.8E-22 1.3E-26 195.5 27.1 246 14-353 137-432 (433)
24 3hrp_A Uncharacterized protein 99.9 4.1E-21 1.4E-25 186.9 30.6 246 14-353 129-409 (409)
25 3s25_A Hypothetical 7-bladed b 99.9 9.9E-22 3.4E-26 183.3 24.4 226 64-363 21-264 (302)
26 3kya_A Putative phosphatase; s 99.9 1.6E-20 5.4E-25 184.9 27.6 252 14-356 137-477 (496)
27 2qc5_A Streptogramin B lactona 99.9 1.1E-18 3.8E-23 160.2 35.6 277 15-353 19-299 (300)
28 3fvz_A Peptidyl-glycine alpha- 99.9 7.2E-19 2.5E-23 165.6 29.2 266 7-355 14-323 (329)
29 1rwi_B Serine/threonine-protei 99.8 1.3E-19 4.4E-24 164.6 22.8 238 17-355 25-265 (270)
30 2z2n_A Virginiamycin B lyase; 99.8 3.1E-17 1.1E-21 150.4 36.3 280 14-354 13-295 (299)
31 1q7f_A NHL, brain tumor CG1071 99.8 6.6E-17 2.2E-21 148.2 31.3 242 14-353 28-279 (286)
32 2fp8_A Strictosidine synthase; 99.8 1.5E-16 5.1E-21 149.2 28.8 247 15-358 18-317 (322)
33 3dsm_A Uncharacterized protein 99.8 5.1E-16 1.8E-20 146.1 32.0 275 28-362 2-310 (328)
34 3tc9_A Hypothetical hydrolase; 99.8 1.1E-16 3.6E-21 156.7 27.9 168 183-361 177-377 (430)
35 2qc5_A Streptogramin B lactona 99.8 1.7E-15 5.8E-20 138.8 34.4 241 56-355 17-261 (300)
36 2p4o_A Hypothetical protein; p 99.8 4.8E-16 1.6E-20 144.9 29.0 227 12-298 28-278 (306)
37 4hw6_A Hypothetical protein, I 99.8 2.3E-16 7.8E-21 154.4 27.5 166 183-361 180-380 (433)
38 3dsm_A Uncharacterized protein 99.8 8.5E-16 2.9E-20 144.6 28.2 253 15-332 43-322 (328)
39 2z2n_A Virginiamycin B lyase; 99.8 8.9E-15 3.1E-19 133.8 34.3 240 56-354 12-255 (299)
40 3hrp_A Uncharacterized protein 99.7 1.7E-15 5.8E-20 147.2 29.1 165 190-361 176-361 (409)
41 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-15 5.3E-20 139.0 27.2 174 185-370 77-254 (286)
42 2p4o_A Hypothetical protein; p 99.7 8.8E-15 3E-19 136.3 30.0 234 57-341 30-277 (306)
43 3vgz_A Uncharacterized protein 99.7 6.3E-14 2.2E-18 131.3 34.4 273 14-341 39-333 (353)
44 3kya_A Putative phosphatase; s 99.7 3.6E-15 1.2E-19 146.8 25.6 167 184-361 185-416 (496)
45 3fvz_A Peptidyl-glycine alpha- 99.7 2.3E-15 7.7E-20 141.6 21.2 168 183-360 22-234 (329)
46 3e5z_A Putative gluconolactona 99.7 7.6E-14 2.6E-18 128.6 27.5 236 15-355 27-287 (296)
47 3u4y_A Uncharacterized protein 99.6 8.2E-13 2.8E-17 122.9 33.7 280 22-355 4-305 (331)
48 1rwi_B Serine/threonine-protei 99.6 1.2E-14 4.1E-19 131.6 19.3 190 151-358 36-226 (270)
49 3g4e_A Regucalcin; six bladed 99.6 3.6E-13 1.2E-17 124.6 29.7 227 56-341 10-261 (297)
50 1l0q_A Surface layer protein; 99.6 8.9E-12 3.1E-16 118.6 40.0 272 28-357 2-278 (391)
51 2qe8_A Uncharacterized protein 99.6 5.3E-14 1.8E-18 133.1 21.7 243 16-347 17-314 (343)
52 3hfq_A Uncharacterized protein 99.6 3.3E-12 1.1E-16 120.0 33.9 267 56-371 37-336 (347)
53 2dg1_A DRP35, lactonase; beta 99.6 5.8E-13 2E-17 124.4 28.0 252 46-354 33-316 (333)
54 2ism_A Putative oxidoreductase 99.6 1.1E-13 3.9E-18 131.6 23.4 234 15-341 30-333 (352)
55 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3.7E-13 1.3E-17 124.3 26.0 243 15-354 17-299 (314)
56 3vgz_A Uncharacterized protein 99.6 1.2E-11 4.2E-16 115.6 36.5 245 58-357 40-306 (353)
57 3a9g_A Putative uncharacterize 99.6 6.3E-13 2.2E-17 126.5 27.6 252 49-354 21-352 (354)
58 2fp8_A Strictosidine synthase; 99.6 4.3E-13 1.5E-17 125.5 25.6 166 185-360 80-275 (322)
59 3dr2_A Exported gluconolactona 99.6 2.5E-12 8.4E-17 119.3 26.9 230 15-308 44-304 (305)
60 1ri6_A Putative isomerase YBHE 99.5 4E-11 1.4E-15 111.3 34.2 277 27-353 4-307 (343)
61 3g4e_A Regucalcin; six bladed 99.5 2.8E-12 9.6E-17 118.6 26.0 225 15-298 12-262 (297)
62 3dr2_A Exported gluconolactona 99.5 8.1E-12 2.8E-16 115.8 28.9 240 46-352 33-304 (305)
63 3bws_A Protein LP49; two-domai 99.5 1E-10 3.4E-15 112.8 37.2 283 15-354 122-432 (433)
64 3qqz_A Putative uncharacterize 99.5 1.5E-11 5.1E-16 111.1 28.8 212 16-310 27-253 (255)
65 3scy_A Hypothetical bacterial 99.5 4.2E-11 1.4E-15 113.1 33.2 257 15-353 49-336 (361)
66 1ri6_A Putative isomerase YBHE 99.5 7.9E-11 2.7E-15 109.2 32.0 279 15-336 37-337 (343)
67 2dg1_A DRP35, lactonase; beta 99.5 4.8E-11 1.6E-15 111.3 30.0 248 15-312 44-318 (333)
68 2g8s_A Glucose/sorbosone dehyd 99.5 3.6E-12 1.2E-16 121.3 22.4 255 46-352 6-352 (353)
69 3a9g_A Putative uncharacterize 99.5 7.9E-12 2.7E-16 118.9 24.4 239 15-310 28-352 (354)
70 2ghs_A AGR_C_1268P; regucalcin 99.5 8.3E-11 2.8E-15 110.2 30.4 227 16-344 49-293 (326)
71 2ism_A Putative oxidoreductase 99.5 6.5E-12 2.2E-16 119.4 22.0 168 184-356 74-299 (352)
72 3hfq_A Uncharacterized protein 99.5 1.5E-10 5.1E-15 108.5 31.1 260 15-309 39-316 (347)
73 3u4y_A Uncharacterized protein 99.4 1.5E-10 5.2E-15 107.4 28.4 259 17-329 42-321 (331)
74 2qe8_A Uncharacterized protein 99.4 1.2E-11 4.2E-16 116.7 20.8 212 15-297 66-309 (343)
75 1l0q_A Surface layer protein; 99.4 1.1E-09 3.7E-14 104.0 33.5 238 16-311 32-276 (391)
76 3das_A Putative oxidoreductase 99.4 2E-10 6.8E-15 108.4 27.6 240 49-341 24-326 (347)
77 2g8s_A Glucose/sorbosone dehyd 99.4 6.4E-11 2.2E-15 112.6 23.2 248 15-307 17-351 (353)
78 3bws_A Protein LP49; two-domai 99.4 3.5E-09 1.2E-13 101.9 34.5 287 18-361 63-397 (433)
79 1qks_A Cytochrome CD1 nitrite 99.4 9.2E-09 3.2E-13 103.7 38.3 327 2-371 177-555 (567)
80 2iwa_A Glutamine cyclotransfer 99.4 8.1E-10 2.8E-14 100.3 27.5 202 17-267 22-238 (266)
81 1nir_A Nitrite reductase; hemo 99.4 9.8E-09 3.4E-13 103.1 38.1 302 16-371 179-531 (543)
82 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.6E-09 1.2E-13 100.4 32.6 192 159-355 118-342 (365)
83 2iwa_A Glutamine cyclotransfer 99.3 1.1E-09 3.6E-14 99.6 26.8 152 187-354 68-237 (266)
84 3e5z_A Putative gluconolactona 99.3 3.2E-10 1.1E-14 104.1 23.2 156 183-353 26-201 (296)
85 3c75_H MADH, methylamine dehyd 99.3 3.4E-09 1.2E-13 102.9 28.7 271 25-355 82-403 (426)
86 3qqz_A Putative uncharacterize 99.3 4.9E-09 1.7E-13 94.6 26.1 174 180-362 21-212 (255)
87 3sjl_D Methylamine dehydrogena 99.3 2E-08 6.8E-13 96.0 31.5 276 21-355 38-364 (386)
88 1pby_B Quinohemoprotein amine 99.2 1.9E-08 6.4E-13 92.8 30.3 266 29-358 2-314 (337)
89 2mad_H Methylamine dehydrogena 99.2 1.1E-07 3.9E-12 90.7 36.5 275 23-357 28-353 (373)
90 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 2.4E-09 8.4E-14 98.4 24.1 164 186-360 72-263 (314)
91 1qks_A Cytochrome CD1 nitrite 99.2 1.1E-07 3.8E-12 95.7 36.9 274 27-353 166-476 (567)
92 1nir_A Nitrite reductase; hemo 99.2 7.6E-08 2.6E-12 96.6 35.3 278 22-356 144-460 (543)
93 2p9w_A MAL S 1 allergenic prot 99.2 3.4E-09 1.2E-13 98.4 22.3 247 15-344 12-305 (334)
94 3nol_A Glutamine cyclotransfer 99.2 7.2E-08 2.4E-12 86.7 28.9 150 187-353 89-255 (262)
95 2oiz_A Aromatic amine dehydrog 99.2 1.3E-08 4.5E-13 96.7 25.5 270 15-333 50-359 (361)
96 3nok_A Glutaminyl cyclase; bet 99.2 9.5E-09 3.3E-13 92.5 22.7 191 19-308 58-264 (268)
97 3sjl_D Methylamine dehydrogena 99.2 1.8E-08 6E-13 96.3 25.7 267 15-331 78-383 (386)
98 1jof_A Carboxy-CIS,CIS-muconat 99.2 2.2E-08 7.4E-13 94.9 26.5 245 16-311 40-342 (365)
99 3nol_A Glutamine cyclotransfer 99.1 1E-08 3.5E-13 92.3 22.3 191 19-309 46-255 (262)
100 1jmx_B Amine dehydrogenase; ox 99.1 5.4E-08 1.9E-12 90.2 28.2 275 18-356 2-327 (349)
101 3c75_H MADH, methylamine dehyd 99.1 4.7E-09 1.6E-13 101.9 21.4 247 15-312 118-404 (426)
102 3das_A Putative oxidoreductase 99.1 2.6E-09 8.8E-14 100.7 19.0 160 181-346 28-224 (347)
103 2mad_H Methylamine dehydrogena 99.1 4E-07 1.4E-11 86.9 34.4 263 14-329 65-369 (373)
104 1cru_A Protein (soluble quinop 99.1 1.4E-08 4.9E-13 99.5 24.7 248 49-349 19-431 (454)
105 1cru_A Protein (soluble quinop 99.1 2.2E-09 7.6E-14 105.3 18.9 160 182-345 24-249 (454)
106 3nok_A Glutaminyl cyclase; bet 99.1 4.4E-08 1.5E-12 88.2 25.7 149 188-353 99-265 (268)
107 3mbr_X Glutamine cyclotransfer 99.1 1.5E-07 5.1E-12 83.9 28.9 150 187-353 67-234 (243)
108 3mbr_X Glutamine cyclotransfer 99.1 5.7E-08 2E-12 86.6 25.9 199 14-310 19-235 (243)
109 3scy_A Hypothetical bacterial 99.1 2.2E-07 7.5E-12 87.3 31.6 163 186-353 101-290 (361)
110 2ece_A 462AA long hypothetical 99.1 1.1E-07 3.7E-12 92.0 28.9 271 25-356 93-453 (462)
111 2ece_A 462AA long hypothetical 99.1 2.7E-07 9.1E-12 89.2 29.7 294 6-353 3-424 (462)
112 3sre_A PON1, serum paraoxonase 99.1 4E-08 1.4E-12 92.9 23.5 170 158-340 81-284 (355)
113 1pby_B Quinohemoprotein amine 99.1 5.4E-08 1.9E-12 89.7 23.8 258 17-339 35-335 (337)
114 3no2_A Uncharacterized protein 99.0 6.9E-07 2.4E-11 81.5 28.7 231 68-355 4-254 (276)
115 2oiz_A Aromatic amine dehydrog 99.0 2.2E-06 7.4E-11 81.2 32.2 272 26-355 14-335 (361)
116 2p9w_A MAL S 1 allergenic prot 99.0 3.1E-08 1.1E-12 92.0 18.3 161 186-353 14-214 (334)
117 2ghs_A AGR_C_1268P; regucalcin 99.0 1.4E-07 4.7E-12 88.2 22.8 153 184-353 48-209 (326)
118 1fwx_A Nitrous oxide reductase 99.0 1.3E-07 4.6E-12 94.3 23.7 289 14-332 84-454 (595)
119 1mda_H Methylamine dehydrogena 98.9 4.6E-08 1.6E-12 93.2 18.3 262 15-331 65-366 (368)
120 3no2_A Uncharacterized protein 98.9 1.5E-06 5E-11 79.3 27.5 240 28-327 5-271 (276)
121 1fwx_A Nitrous oxide reductase 98.9 2.8E-07 9.5E-12 92.0 24.1 255 67-369 100-446 (595)
122 1mda_H Methylamine dehydrogena 98.9 1.2E-07 4.1E-12 90.3 20.5 264 26-354 30-346 (368)
123 3sre_A PON1, serum paraoxonase 98.9 2.1E-07 7.1E-12 88.0 19.8 159 187-354 52-252 (355)
124 2wg3_C Hedgehog-interacting pr 98.8 2.3E-06 7.9E-11 83.9 24.8 155 187-352 141-371 (463)
125 2hqs_A Protein TOLB; TOLB, PAL 98.8 1.8E-05 6.3E-10 76.2 30.7 223 38-318 159-395 (415)
126 2ecf_A Dipeptidyl peptidase IV 98.8 7.8E-06 2.7E-10 84.3 29.8 288 15-360 36-421 (741)
127 3q6k_A 43.2 kDa salivary prote 98.7 8.2E-06 2.8E-10 77.5 26.1 207 14-297 85-342 (381)
128 2ojh_A Uncharacterized protein 98.7 2.3E-05 7.7E-10 70.0 27.4 247 36-341 20-291 (297)
129 2hqs_A Protein TOLB; TOLB, PAL 98.7 2.9E-05 9.9E-10 74.8 29.6 193 151-360 192-393 (415)
130 3amr_A 3-phytase; beta-propell 98.7 2E-05 6.8E-10 73.8 27.0 192 152-355 42-264 (355)
131 2ymu_A WD-40 repeat protein; u 98.7 0.00038 1.3E-08 69.1 38.1 278 17-359 223-503 (577)
132 3q6k_A 43.2 kDa salivary prote 98.6 6.8E-05 2.3E-09 71.1 29.9 158 185-345 152-345 (381)
133 3pe7_A Oligogalacturonate lyas 98.6 3.3E-05 1.1E-09 72.7 27.6 295 21-353 41-383 (388)
134 1r5m_A SIR4-interacting protei 98.6 0.00028 9.6E-09 66.4 34.2 287 17-354 110-425 (425)
135 3amr_A 3-phytase; beta-propell 98.6 2.2E-05 7.5E-10 73.5 25.1 193 29-267 41-264 (355)
136 1gxr_A ESG1, transducin-like e 98.6 0.0003 1E-08 64.0 32.8 188 152-357 112-299 (337)
137 2ymu_A WD-40 repeat protein; u 98.6 0.00053 1.8E-08 68.0 36.9 278 17-359 264-544 (577)
138 3mkq_A Coatomer beta'-subunit; 98.6 0.00064 2.2E-08 70.4 38.4 280 16-353 14-301 (814)
139 2ojh_A Uncharacterized protein 98.6 5E-05 1.7E-09 67.7 25.9 194 151-361 55-265 (297)
140 3azo_A Aminopeptidase; POP fam 98.5 6E-05 2.1E-09 76.6 28.7 284 17-361 25-376 (662)
141 2z3z_A Dipeptidyl aminopeptida 98.5 0.00018 6.3E-09 73.5 32.5 186 161-356 236-437 (706)
142 1jmx_B Amine dehydrogenase; ox 98.5 4.1E-05 1.4E-09 70.5 25.1 226 63-357 4-287 (349)
143 3c5m_A Oligogalacturonate lyas 98.4 0.00019 6.4E-09 67.4 25.1 303 17-360 37-390 (396)
144 2ynn_A Coatomer subunit beta'; 98.4 0.0015 5E-08 59.6 35.5 279 16-352 14-300 (304)
145 2wg3_C Hedgehog-interacting pr 98.3 7.1E-06 2.4E-10 80.4 14.9 157 182-341 11-242 (463)
146 2ecf_A Dipeptidyl peptidase IV 98.3 0.00035 1.2E-08 71.8 28.2 163 185-357 287-462 (741)
147 4aez_A CDC20, WD repeat-contai 98.3 0.0024 8.2E-08 60.4 38.6 276 23-356 99-382 (401)
148 2z3z_A Dipeptidyl aminopeptida 98.3 0.00017 5.9E-09 73.8 25.5 167 187-360 183-397 (706)
149 3zwl_B Eukaryotic translation 98.3 0.0021 7E-08 59.1 36.2 283 16-353 33-345 (369)
150 2pm9_A Protein WEB1, protein t 98.3 0.00026 8.7E-09 66.9 24.8 290 15-355 12-338 (416)
151 3azo_A Aminopeptidase; POP fam 98.3 0.00018 6.1E-09 73.1 24.5 196 152-360 94-331 (662)
152 3hxj_A Pyrrolo-quinoline quino 98.3 6.1E-05 2.1E-09 69.1 19.2 275 9-360 13-290 (330)
153 1gxr_A ESG1, transducin-like e 98.3 0.0023 7.9E-08 58.1 37.4 270 16-349 52-332 (337)
154 3i2n_A WD repeat-containing pr 98.2 0.0028 9.5E-08 58.1 29.5 291 16-353 19-352 (357)
155 3pe7_A Oligogalacturonate lyas 98.2 0.00065 2.2E-08 63.6 24.3 199 151-362 94-337 (388)
156 1k32_A Tricorn protease; prote 98.2 0.0015 5.3E-08 70.2 29.7 155 186-356 297-463 (1045)
157 2xyi_A Probable histone-bindin 98.2 0.0011 3.7E-08 63.7 25.7 242 16-309 129-409 (430)
158 3hxj_A Pyrrolo-quinoline quino 98.1 0.00014 4.8E-09 66.6 18.4 259 18-352 62-322 (330)
159 4gqb_B Methylosome protein 50; 98.1 0.0021 7.1E-08 60.0 26.8 238 18-308 85-329 (344)
160 1r5m_A SIR4-interacting protei 98.1 0.0057 2E-07 57.3 30.9 282 16-356 46-363 (425)
161 3ow8_A WD repeat-containing pr 98.1 0.0052 1.8E-07 56.5 37.8 274 17-348 34-315 (321)
162 3o4h_A Acylamino-acid-releasin 98.1 0.00027 9.3E-09 70.7 21.3 269 17-354 23-315 (582)
163 2vdu_B TRNA (guanine-N(7)-)-me 98.1 0.0025 8.7E-08 61.3 27.5 232 17-295 104-370 (450)
164 2xyi_A Probable histone-bindin 98.1 0.0068 2.3E-07 58.0 29.7 193 152-353 196-409 (430)
165 4g56_B MGC81050 protein; prote 98.0 0.00057 2E-08 64.1 20.8 240 17-309 96-342 (357)
166 1vyh_C Platelet-activating fac 98.0 0.01 3.6E-07 56.4 33.7 261 17-336 110-395 (410)
167 1xfd_A DIP, dipeptidyl aminope 98.0 0.0035 1.2E-07 64.0 26.4 284 16-355 17-396 (723)
168 1sq9_A Antiviral protein SKI8; 97.9 0.013 4.5E-07 54.6 33.4 282 16-354 17-395 (397)
169 2vdu_B TRNA (guanine-N(7)-)-me 97.9 0.017 5.7E-07 55.5 34.2 239 60-355 104-394 (450)
170 2aq5_A Coronin-1A; WD40 repeat 97.9 0.011 3.9E-07 55.6 27.0 225 16-292 82-328 (402)
171 1yr2_A Prolyl oligopeptidase; 97.9 0.015 5.3E-07 59.9 29.8 160 187-357 270-444 (741)
172 3jrp_A Fusion protein of prote 97.9 0.017 5.8E-07 53.1 27.6 246 16-309 12-288 (379)
173 1xfd_A DIP, dipeptidyl aminope 97.9 0.0037 1.3E-07 63.9 24.4 152 186-341 256-429 (723)
174 4aez_A CDC20, WD repeat-contai 97.8 0.022 7.5E-07 53.7 31.1 236 16-310 135-380 (401)
175 4gqb_B Methylosome protein 50; 97.8 0.02 7E-07 53.2 29.7 239 61-353 85-330 (344)
176 4g56_B MGC81050 protein; prote 97.8 0.015 5E-07 54.3 26.1 188 153-353 154-342 (357)
177 1k32_A Tricorn protease; prote 97.8 0.011 3.6E-07 63.6 28.2 171 151-341 310-491 (1045)
178 3k26_A Polycomb protein EED; W 97.8 0.021 7.1E-07 52.2 30.4 286 16-352 19-364 (366)
179 3c5m_A Oligogalacturonate lyas 97.8 0.011 3.7E-07 55.1 24.6 146 161-319 217-393 (396)
180 1k8k_C P40, ARP2/3 complex 41 97.8 0.023 8E-07 52.2 29.9 189 152-354 67-274 (372)
181 3o4h_A Acylamino-acid-releasin 97.8 0.0033 1.1E-07 62.8 21.6 150 189-352 114-274 (582)
182 3zwl_B Eukaryotic translation 97.7 0.025 8.6E-07 51.6 37.5 241 45-341 18-279 (369)
183 3ow8_A WD repeat-containing pr 97.7 0.026 8.9E-07 51.7 29.4 222 17-296 82-309 (321)
184 3mkq_A Coatomer beta'-subunit; 97.7 0.067 2.3E-06 55.0 33.7 241 57-355 12-260 (814)
185 3frx_A Guanine nucleotide-bind 97.7 0.034 1.1E-06 50.7 35.1 275 16-352 18-315 (319)
186 2pm9_A Protein WEB1, protein t 97.6 0.017 5.8E-07 54.1 23.2 241 16-310 68-337 (416)
187 2xdw_A Prolyl endopeptidase; a 97.6 0.086 2.9E-06 53.9 33.4 182 162-356 210-416 (710)
188 2aq5_A Coronin-1A; WD40 repeat 97.6 0.053 1.8E-06 50.9 32.8 261 18-332 37-324 (402)
189 2bkl_A Prolyl endopeptidase; m 97.5 0.042 1.4E-06 56.2 26.4 186 162-360 204-403 (695)
190 3sfz_A APAF-1, apoptotic pepti 97.5 0.18 6.2E-06 54.7 35.5 285 16-353 616-912 (1249)
191 1yfq_A Cell cycle arrest prote 97.5 0.061 2.1E-06 48.7 27.4 234 15-311 11-283 (342)
192 3ei3_B DNA damage-binding prot 97.4 0.073 2.5E-06 49.4 31.6 283 16-353 74-381 (383)
193 4a5s_A Dipeptidyl peptidase 4 97.4 0.11 3.9E-06 53.3 28.6 168 187-360 262-455 (740)
194 2xzm_R RACK1; ribosome, transl 97.4 0.071 2.4E-06 49.0 29.5 276 17-353 23-339 (343)
195 3vl1_A 26S proteasome regulato 97.4 0.081 2.8E-06 49.6 28.9 283 15-354 56-365 (420)
196 1k8k_C P40, ARP2/3 complex 41 97.4 0.075 2.6E-06 48.7 34.1 242 16-307 9-273 (372)
197 3jrp_A Fusion protein of prote 97.4 0.075 2.6E-06 48.7 28.9 181 159-353 78-286 (379)
198 3odt_A Protein DOA1; ubiquitin 97.4 0.066 2.3E-06 47.6 32.9 271 16-355 19-297 (313)
199 3dm0_A Maltose-binding peripla 97.4 0.17 5.7E-06 51.5 35.1 237 16-311 383-633 (694)
200 4a9v_A PHOX; hydrolase, beta-p 97.3 0.0032 1.1E-07 62.4 14.4 115 182-297 381-550 (592)
201 4ery_A WD repeat-containing pr 97.3 0.08 2.7E-06 47.6 32.9 225 17-296 67-298 (312)
202 4a11_B DNA excision repair pro 97.3 0.1 3.5E-06 48.3 27.6 246 16-310 100-365 (408)
203 1pgu_A Actin interacting prote 97.3 0.15 5.1E-06 50.2 36.4 280 11-354 14-328 (615)
204 2xdw_A Prolyl endopeptidase; a 97.3 0.19 6.5E-06 51.3 29.7 246 18-318 127-424 (710)
205 4a11_B DNA excision repair pro 97.3 0.12 4.2E-06 47.8 28.9 291 16-354 44-365 (408)
206 4a5s_A Dipeptidyl peptidase 4 97.2 0.21 7.1E-06 51.3 27.6 118 239-360 264-406 (740)
207 3mmy_A MRNA export factor; mRN 97.2 0.11 3.9E-06 47.1 29.9 269 16-341 40-335 (368)
208 4aow_A Guanine nucleotide-bind 97.2 0.12 4E-06 46.6 34.1 278 16-353 39-336 (340)
209 1yfq_A Cell cycle arrest prote 97.2 0.11 3.9E-06 46.9 22.7 228 16-295 57-310 (342)
210 1pgu_A Actin interacting prote 97.2 0.2 7E-06 49.2 29.1 158 184-355 116-284 (615)
211 4a9v_A PHOX; hydrolase, beta-p 97.2 0.0058 2E-07 60.5 14.4 112 232-345 381-553 (592)
212 1vyh_C Platelet-activating fac 97.2 0.17 5.7E-06 47.9 33.9 240 59-356 109-371 (410)
213 3vl1_A 26S proteasome regulato 97.1 0.17 5.8E-06 47.3 29.9 233 23-310 105-365 (420)
214 1p22_A F-BOX/WD-repeat protein 97.1 0.21 7.1E-06 47.4 31.6 258 29-355 144-415 (435)
215 1erj_A Transcriptional repress 97.1 0.2 6.7E-06 47.0 37.4 285 16-352 65-387 (393)
216 3ei3_B DNA damage-binding prot 97.1 0.19 6.3E-06 46.6 26.3 190 151-356 88-284 (383)
217 3iuj_A Prolyl endopeptidase; h 97.1 0.34 1.2E-05 49.4 30.2 145 161-319 260-414 (693)
218 3sfz_A APAF-1, apoptotic pepti 97.0 0.54 1.8E-05 51.0 33.5 225 16-296 658-901 (1249)
219 3k26_A Polycomb protein EED; W 97.0 0.19 6.7E-06 45.5 24.1 239 16-307 70-363 (366)
220 1yr2_A Prolyl oligopeptidase; 97.0 0.34 1.2E-05 49.8 26.4 113 194-315 325-446 (741)
221 3jro_A Fusion protein of prote 97.0 0.065 2.2E-06 55.3 20.8 246 16-309 10-284 (753)
222 1sq9_A Antiviral protein SKI8; 96.9 0.26 9.1E-06 45.5 32.3 191 159-357 90-325 (397)
223 2ynn_A Coatomer subunit beta'; 96.9 0.24 8.1E-06 44.5 32.6 242 57-356 12-261 (304)
224 1z68_A Fibroblast activation p 96.9 0.044 1.5E-06 55.9 18.2 115 237-355 255-394 (719)
225 1got_B GT-beta; complex (GTP-b 96.8 0.3 1E-05 44.6 36.0 252 49-358 48-305 (340)
226 3v9f_A Two-component system se 96.8 0.64 2.2E-05 48.0 27.6 274 17-355 314-612 (781)
227 3iz6_a 40S ribosomal protein R 96.8 0.36 1.2E-05 44.9 32.3 189 153-355 173-376 (380)
228 4ery_A WD repeat-containing pr 96.7 0.29 1E-05 43.8 38.1 265 16-339 24-297 (312)
229 1kli_L Factor VIIA; extrinsic 96.7 0.00021 7.3E-09 50.3 -0.4 29 115-143 3-36 (69)
230 3iuj_A Prolyl endopeptidase; h 96.6 0.76 2.6E-05 46.7 32.3 163 187-361 236-412 (693)
231 2gop_A Trilobed protease; beta 96.5 0.28 9.6E-06 44.5 19.7 161 162-351 45-250 (347)
232 3dwl_C Actin-related protein 2 96.5 0.06 2.1E-06 49.7 15.1 177 160-353 77-280 (377)
233 2ovr_B FBW7, F-BOX/WD repeat p 96.5 0.58 2E-05 44.3 35.6 171 160-354 259-442 (445)
234 1got_B GT-beta; complex (GTP-b 96.4 0.52 1.8E-05 43.0 36.5 258 16-334 56-325 (340)
235 1kig_L Factor XA; glycoprotein 96.4 0.00065 2.2E-08 44.7 0.5 25 119-143 1-28 (51)
236 2pm7_B Protein transport prote 96.4 0.49 1.7E-05 42.2 28.8 244 17-311 11-288 (297)
237 4e54_B DNA damage-binding prot 96.4 0.15 5E-06 48.6 17.4 160 185-353 120-281 (435)
238 3jro_A Fusion protein of prote 96.4 0.54 1.8E-05 48.4 22.8 187 154-353 71-284 (753)
239 3mmy_A MRNA export factor; mRN 96.4 0.53 1.8E-05 42.5 25.6 232 16-296 87-334 (368)
240 2gop_A Trilobed protease; beta 96.4 0.56 1.9E-05 42.5 25.3 163 161-354 86-292 (347)
241 3odt_A Protein DOA1; ubiquitin 96.3 0.52 1.8E-05 41.6 33.2 240 56-357 16-258 (313)
242 1nr0_A Actin interacting prote 96.3 1.1 3.7E-05 44.7 32.0 194 17-267 149-356 (611)
243 3f3f_A Nucleoporin SEH1; struc 96.3 0.59 2E-05 41.6 27.5 205 16-266 12-249 (351)
244 3dwl_C Actin-related protein 2 96.2 0.068 2.3E-06 49.3 13.4 240 16-309 12-280 (377)
245 4e54_B DNA damage-binding prot 96.2 0.3 1E-05 46.4 18.1 194 150-356 132-329 (435)
246 2bz6_L Blood coagulation facto 96.0 0.00071 2.4E-08 44.9 -0.8 25 119-143 2-30 (53)
247 3v9f_A Two-component system se 96.0 1.7 5.9E-05 44.7 29.5 154 185-355 407-569 (781)
248 3frx_A Guanine nucleotide-bind 96.0 0.86 2.9E-05 41.1 30.9 182 152-353 79-266 (319)
249 2ovr_B FBW7, F-BOX/WD repeat p 95.9 1.3 4.3E-05 41.9 35.9 261 23-355 125-392 (445)
250 2wph_E Coagulation factor IXA 95.8 0.0013 4.3E-08 44.8 -0.3 25 119-143 2-30 (59)
251 2bkl_A Prolyl endopeptidase; m 95.8 1.9 6.4E-05 43.7 28.0 185 161-360 148-357 (695)
252 1z68_A Fibroblast activation p 95.7 0.95 3.2E-05 45.9 20.4 166 187-356 255-445 (719)
253 2pbi_B Guanine nucleotide-bind 95.7 1.3 4.4E-05 40.7 36.6 262 17-338 66-343 (354)
254 3v7d_B Cell division control p 95.6 1.5 5.2E-05 41.4 39.4 266 30-355 134-422 (464)
255 4a2l_A BT_4663, two-component 95.6 2.5 8.6E-05 43.5 30.4 273 16-355 310-615 (795)
256 3iz6_a 40S ribosomal protein R 95.5 1.5 5.2E-05 40.5 26.0 162 187-355 160-330 (380)
257 2pbi_B Guanine nucleotide-bind 95.4 1.5 5.3E-05 40.1 35.9 252 49-356 57-317 (354)
258 4h5i_A Guanine nucleotide-exch 95.4 1.6 5.5E-05 40.3 23.7 194 61-308 136-341 (365)
259 4a2l_A BT_4663, two-component 95.4 2.9 9.9E-05 43.1 29.8 269 17-352 358-657 (795)
260 2jkh_L Factor X light chain; p 95.4 0.0019 6.5E-08 43.2 -0.8 25 119-143 4-31 (55)
261 1nr0_A Actin interacting prote 95.2 2.7 9.3E-05 41.7 35.3 246 3-309 4-269 (611)
262 4h5i_A Guanine nucleotide-exch 95.2 1.9 6.6E-05 39.7 24.3 196 17-266 135-343 (365)
263 3gre_A Serine/threonine-protei 95.1 2.3 7.7E-05 39.8 22.3 206 16-268 112-361 (437)
264 3i2n_A WD repeat-containing pr 94.8 2.2 7.4E-05 38.3 27.9 182 160-354 90-291 (357)
265 3v7d_B Cell division control p 94.7 3 0.0001 39.3 35.6 277 17-341 164-451 (464)
266 3dm0_A Maltose-binding peripla 94.5 4.6 0.00016 40.7 31.3 189 152-355 444-633 (694)
267 3dw8_B Serine/threonine-protei 94.2 3.5 0.00012 38.4 25.3 170 184-360 177-379 (447)
268 1tl2_A L10, protein (tachylect 94.0 0.36 1.2E-05 42.0 9.8 106 184-306 40-159 (236)
269 2oaj_A Protein SNI1; WD40 repe 93.6 8.4 0.00029 40.4 22.7 204 16-267 18-243 (902)
270 2j04_B YDR362CP, TAU91; beta p 93.5 3.4 0.00011 40.6 17.5 188 152-356 325-519 (524)
271 3dw8_B Serine/threonine-protei 93.4 4.9 0.00017 37.3 28.4 145 158-315 196-378 (447)
272 2ad6_A Methanol dehydrogenase 93.4 6.7 0.00023 38.8 32.2 66 27-93 62-140 (571)
273 4gga_A P55CDC, cell division c 93.4 5.1 0.00017 37.4 29.6 139 160-308 252-393 (420)
274 3q7m_A Lipoprotein YFGL, BAMB; 92.9 5.4 0.00019 36.5 32.1 135 196-351 239-375 (376)
275 1tl2_A L10, protein (tachylect 92.8 1 3.6E-05 39.0 10.9 100 233-340 39-152 (236)
276 3q7m_A Lipoprotein YFGL, BAMB; 92.7 5.8 0.0002 36.3 33.7 264 27-355 53-338 (376)
277 3vu4_A KMHSV2; beta-propeller 92.7 5.7 0.0002 36.2 28.2 226 16-309 20-270 (355)
278 3zwu_A Alkaline phosphatase PH 92.7 1.8 6.2E-05 43.2 14.0 114 183-297 382-550 (592)
279 2xe4_A Oligopeptidase B; hydro 92.6 10 0.00035 38.8 26.2 185 151-352 188-398 (751)
280 3zwu_A Alkaline phosphatase PH 92.5 2.8 9.5E-05 41.9 15.0 109 232-341 381-550 (592)
281 1erj_A Transcriptional repress 92.0 7.5 0.00026 35.9 35.1 185 153-356 138-343 (393)
282 4aow_A Guanine nucleotide-bind 91.8 6.6 0.00022 34.7 35.8 180 159-355 107-287 (340)
283 3bg1_A Protein SEC13 homolog; 91.6 7.1 0.00024 34.8 22.7 263 16-330 14-312 (316)
284 3fm0_A Protein CIAO1; WDR39,SG 91.4 7.9 0.00027 35.0 32.8 281 17-353 18-334 (345)
285 3gre_A Serine/threonine-protei 91.3 9.2 0.00031 35.5 29.1 217 16-269 64-295 (437)
286 2oaj_A Protein SNI1; WD40 repe 91.3 16 0.00055 38.3 24.1 147 154-309 73-241 (902)
287 4ggc_A P55CDC, cell division c 90.2 8.8 0.0003 33.5 30.2 136 152-295 164-302 (318)
288 2oit_A Nucleoporin 214KDA; NH2 89.6 4.7 0.00016 38.2 13.3 125 185-316 93-229 (434)
289 1p22_A F-BOX/WD-repeat protein 89.6 13 0.00045 34.6 31.5 177 152-353 185-364 (435)
290 3f1s_B Vitamin K-dependent pro 89.6 0.1 3.4E-06 47.1 1.3 27 117-143 2-33 (283)
291 4gga_A P55CDC, cell division c 89.3 14 0.00047 34.3 37.9 260 37-353 124-394 (420)
292 3lrv_A PRE-mRNA-splicing facto 88.9 13 0.00043 33.4 27.1 157 185-353 126-291 (343)
293 2pm7_B Protein transport prote 88.8 12 0.0004 32.9 29.9 190 152-354 69-287 (297)
294 4ggc_A P55CDC, cell division c 88.7 11 0.00039 32.7 36.9 259 36-351 43-312 (318)
295 3fm0_A Protein CIAO1; WDR39,SG 88.6 13 0.00046 33.4 29.8 137 161-309 84-226 (345)
296 1apq_A Complement protease C1R 88.6 0.15 5E-06 33.2 1.2 21 123-143 19-42 (53)
297 1kb0_A Quinohemoprotein alcoho 88.6 22 0.00076 35.8 30.7 67 27-95 77-155 (677)
298 2xe4_A Oligopeptidase B; hydro 87.8 26 0.00089 35.7 18.8 157 196-355 126-305 (751)
299 2xzm_R RACK1; ribosome, transl 87.0 17 0.00057 32.6 32.3 185 152-353 90-284 (343)
300 3vu4_A KMHSV2; beta-propeller 86.0 19 0.00067 32.5 28.6 192 18-266 61-271 (355)
301 2hes_X YDR267CP; beta-propelle 84.2 22 0.00077 31.6 31.8 236 18-309 17-279 (330)
302 3f3f_A Nucleoporin SEH1; struc 83.3 22 0.00075 30.9 29.5 148 159-308 80-247 (351)
303 3lrv_A PRE-mRNA-splicing facto 80.1 32 0.0011 30.6 28.8 107 152-266 184-292 (343)
304 2oit_A Nucleoporin 214KDA; NH2 76.1 52 0.0018 30.8 26.2 172 152-335 164-373 (434)
305 2w2n_E LDL receptor, low-densi 72.3 1 3.5E-05 34.1 0.7 29 115-143 27-59 (107)
306 3bg1_A Protein SEC13 homolog; 72.2 51 0.0017 29.0 24.0 182 160-351 81-290 (316)
307 3b7f_A Glycosyl hydrolase, BNR 72.1 60 0.002 29.7 18.7 192 150-351 23-259 (394)
308 2j04_A TAU60, YPL007P, hypothe 66.4 1.1E+02 0.0036 30.4 22.5 131 186-329 131-273 (588)
309 2cn3_A Xyloglucanase, beta-1,4 66.0 1.2E+02 0.004 30.8 15.5 169 186-361 24-237 (737)
310 1sqj_A OXG-RCBH, oligoxylogluc 62.5 1.4E+02 0.0049 30.5 16.1 171 184-361 14-207 (789)
311 2ad6_A Methanol dehydrogenase 61.8 1.2E+02 0.0042 29.5 31.8 71 20-94 110-192 (571)
312 1aut_L Activated protein C; se 61.3 1.7 5.9E-05 33.1 0.0 27 117-143 54-84 (114)
313 2hes_X YDR267CP; beta-propelle 59.6 92 0.0031 27.4 29.8 96 185-289 108-209 (330)
314 2j04_B YDR362CP, TAU91; beta p 58.1 1.4E+02 0.0046 28.9 19.6 131 153-295 280-415 (524)
315 1kb0_A Quinohemoprotein alcoho 56.4 1.7E+02 0.0056 29.3 29.5 26 65-91 74-100 (677)
316 4gq1_A NUP37; propeller, trans 56.0 1.2E+02 0.0041 27.5 22.6 62 245-310 326-389 (393)
317 4gq1_A NUP37; propeller, trans 55.3 1.2E+02 0.0042 27.4 22.9 196 151-354 157-389 (393)
318 3a0f_A Xyloglucanase; beta-pro 51.2 2.1E+02 0.0072 29.0 15.3 174 183-361 19-219 (763)
319 1szb_A Mannose binding lectin- 50.3 4.4 0.00015 33.1 0.7 28 116-143 123-157 (170)
320 3sbq_A Nitrous-oxide reductase 49.8 2E+02 0.007 28.4 13.2 134 235-370 323-494 (638)
321 3s9j_A Member of DUF4221 famil 49.5 34 0.0012 31.8 6.8 68 28-95 40-117 (369)
322 3ott_A Two-component system se 42.3 2.8E+02 0.0094 27.8 24.1 182 150-355 74-261 (758)
323 1kv9_A Type II quinohemoprotei 42.0 2.7E+02 0.0093 27.6 29.2 65 27-93 66-142 (668)
324 2zuy_A YESX protein; beta-prop 40.8 2.8E+02 0.0096 27.5 12.7 119 209-341 274-412 (620)
325 3sbq_A Nitrous-oxide reductase 40.3 75 0.0025 31.5 7.7 51 246-296 142-195 (638)
326 3a0f_A Xyloglucanase; beta-pro 40.2 2E+02 0.0068 29.2 11.5 125 234-361 20-170 (763)
327 3b7f_A Glycosyl hydrolase, BNR 38.6 2.2E+02 0.0077 25.7 23.6 123 186-317 233-379 (394)
328 3ott_A Two-component system se 36.4 3.4E+02 0.012 27.1 22.2 177 149-353 32-219 (758)
329 1lmj_A Fibrillin 1; EGF, calci 36.1 11 0.00037 26.8 0.8 28 116-143 2-34 (86)
330 2j04_A TAU60, YPL007P, hypothe 36.0 3.3E+02 0.011 26.9 20.3 132 151-296 142-286 (588)
331 1z6c_A Vitamin K-dependent pro 34.3 20 0.00069 25.4 2.1 27 117-143 3-34 (87)
332 1x7a_L Coagulation factor IX, 34.2 12 0.00043 29.6 1.0 28 116-143 84-116 (146)
333 1s1d_A Apyrase; adpase, five-b 33.0 1.4E+02 0.0047 27.0 7.6 50 27-77 104-160 (331)
334 2zux_A YESW protein; beta-prop 32.4 3.7E+02 0.013 26.4 13.0 119 209-341 270-408 (591)
335 1yiq_A Quinohemoprotein alcoho 29.5 4.3E+02 0.015 26.2 30.5 71 20-94 116-199 (689)
336 2w86_A Fibrillin-1, fibrillin1 28.9 13 0.00045 29.3 0.3 28 116-143 106-138 (147)
337 1w6s_A Methanol dehydrogenase 28.8 4.3E+02 0.015 25.9 32.2 64 27-91 62-144 (599)
338 2kl7_A Fibulin-4; secreted, ca 28.3 36 0.0012 23.2 2.5 28 116-143 2-36 (71)
339 3s9j_A Member of DUF4221 famil 28.1 3E+02 0.01 25.3 9.5 156 197-359 40-233 (369)
340 3h5c_B Vitamin K-dependent pro 27.8 25 0.00086 31.5 2.0 28 116-143 42-74 (317)
341 1nzi_A Complement C1S componen 27.5 19 0.00065 28.6 1.0 28 116-143 116-148 (159)
342 1yiq_A Quinohemoprotein alcoho 26.7 4.8E+02 0.017 25.9 30.7 65 27-93 70-146 (689)
343 1uzk_A Fibrillin-1; glycoprote 26.4 15 0.00051 29.5 0.2 29 115-143 120-153 (162)
344 1nfu_B Coagulation factor XA, 24.1 13 0.00045 31.2 -0.6 26 118-143 82-111 (195)
345 2vh0_B Activated factor XA lig 24.0 14 0.00047 28.8 -0.4 26 118-143 82-111 (134)
346 2c4f_L Coagulation factor VII 23.5 19 0.00065 28.3 0.3 25 119-143 91-119 (142)
347 1emn_A Fibrillin; extracellula 23.2 43 0.0015 23.3 2.1 26 116-142 4-34 (82)
348 2nx7_A Nematocyst outer WALL a 20.7 15 0.0005 19.4 -0.6 14 119-132 5-18 (28)
No 1
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=2.7e-62 Score=500.76 Aligned_cols=359 Identities=21% Similarity=0.361 Sum_probs=319.0
Q ss_pred ceeEeeccccCC-----------------CCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEE
Q psy5792 2 GYLHVLPYTRNP-----------------SFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVA 63 (377)
Q Consensus 2 ~~~~~~~~~~~~-----------------~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~ 63 (377)
|+|||.||...+ .+..|.|+++|+.+++|||+|+..+.|++++++|+ ++.+. ..+.+|+|
T Consensus 135 G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~--~~l~~P~g 212 (628)
T 4a0p_A 135 GFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA--DDLPHPFG 212 (628)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--ECCSCEEE
T ss_pred CeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee--ccCCCceE
Confidence 899999996433 24689999999999999999999999999999999 86654 67889999
Q ss_pred EEEECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCC-cCCCCCCceeccccCC-Cccc-
Q psy5792 64 AVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIK-YNKNESKVQQVLGPLS-KVSL- 138 (377)
Q Consensus 64 lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~-C~~~~g~Cs~~C~~~~-~~~~- 138 (377)
|++++++|||||+.++.|.+++ .+|+..+++..+.. |++|+++++.+| ++.| |..+||+|+|+|++.+ +++.
T Consensus 213 lav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q---~~~n~C~~~ng~C~~~C~~~~~~~~~C 289 (628)
T 4a0p_A 213 LTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQ---SGWNECASSNGHCSHLCLAVPVGGFVC 289 (628)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGS---CCCCTTTTTGGGCSSEEEEETTTEEEE
T ss_pred EEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeeccc---ccceEeccCCCCcchhhhcCCCCCeeE
Confidence 9999999999999999999999 88999988887777 999999999998 6889 9999999999999999 6666
Q ss_pred --cCCcC------CCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEE
Q psy5792 139 --AAKVD------FHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTIS 210 (377)
Q Consensus 139 --~~G~~------~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~ 210 (377)
+.||. +|.++++||+++..+. |+++.++.... ...++|+.++.++.+++||..+++|||+|...++|+
T Consensus 290 ~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~--i~~i~l~~~~~--~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~ 365 (628)
T 4a0p_A 290 GCPAHYSLNADNRTCSAPTTFLLFSQKSA--INRMVIDEQQS--PDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIR 365 (628)
T ss_dssp ECSTTCEECTTSSCEECCSSEEEEEETTE--EEEECCCTTCC--CCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EcCCCcEecccCCcCccccceeeeeccce--EEEEecccccC--ceEEEEehhcCCceEEEEecCCCeEEEEecCcceEE
Confidence 78986 9999999999999988 99999987644 346778888999999999999999999999999999
Q ss_pred EEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCC
Q psy5792 211 RTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG 290 (377)
Q Consensus 211 ~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g 290 (377)
|+.++|+..+.++... ......+..|.|||+||.+++|||||...++|.+++++|+.+++++...+..|++|||||.+|
T Consensus 366 r~~~~g~~~~~v~~~~-~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g 444 (628)
T 4a0p_A 366 KAQEDGSQGFTVVVSS-VPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKG 444 (628)
T ss_dssp EEETTSCSCEEEEC---------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTT
T ss_pred EEEcCCCCceEEEEcc-cccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCC
Confidence 9999998877776500 000014678999999999999999999999999999999999999888899999999999999
Q ss_pred eEEEEecCCCC-eEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEEecCCCCCc
Q psy5792 291 YLFWSESGKIP-LIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLKLSSNIKNA 369 (377)
Q Consensus 291 ~lywtd~g~~~-~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~~~~~~~~p 369 (377)
+|||||++..+ +|+|++|||+.+++++.+.+.+|+||++|+.+++|||+|. ..++|++++++|++++++.. ..+.||
T Consensus 445 ~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~-~~~~I~~~~~dG~~r~~~~~-~~~~~P 522 (628)
T 4a0p_A 445 YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS-DLRRIESSDLSGANRIVLED-SNILQP 522 (628)
T ss_dssp EEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEC-SSCSCE
T ss_pred eEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeC-CCCEEEEEeCCCCceEEEEc-CCCCCc
Confidence 99999998554 9999999999999999988999999999999999999999 99999999999998887764 567899
Q ss_pred ccc
Q psy5792 370 LLD 372 (377)
Q Consensus 370 ~~~ 372 (377)
|+.
T Consensus 523 ~gl 525 (628)
T 4a0p_A 523 VGL 525 (628)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 2
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=7.5e-62 Score=497.02 Aligned_cols=355 Identities=22% Similarity=0.389 Sum_probs=315.7
Q ss_pred ceeEeeccccCCC------------------CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceE
Q psy5792 2 GYLHVLPYTRNPS------------------FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVV 62 (377)
Q Consensus 2 ~~~~~~~~~~~~~------------------~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~ 62 (377)
|+|||.||..++. +..|.|+++|+.+++|||+|...++|++++++|+ ++++. ...+.+|+
T Consensus 139 g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~-~~~~~~P~ 217 (619)
T 3s94_A 139 GFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPHPF 217 (619)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CC
T ss_pred CeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE-eCCCCCce
Confidence 8999999975432 3589999999999999999999999999999999 88776 24688999
Q ss_pred EEEEECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCC-cCCCCCCceeccccCCCc--c
Q psy5792 63 AAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIK-YNKNESKVQQVLGPLSKV--S 137 (377)
Q Consensus 63 ~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~-C~~~~g~Cs~~C~~~~~~--~ 137 (377)
||++++++||||||.+++|.+++ .+|+..+++..... |.+|+++|+.+| +.+.| |..++|+|||+|++.+.. +
T Consensus 218 gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~q--p~~~n~C~~~ng~Cs~lCl~~~~~~~~ 295 (619)
T 3s94_A 218 ALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQ--PNATNPCGIDNGGCSHLCLMSPVKPFY 295 (619)
T ss_dssp CEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGS--CCCCCTTTTTGGGCSSEEEECSSTTSE
T ss_pred EEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccC--CCccccccCCCCcccceEECCCCCCCc
Confidence 99999999999999999999999 78988888877766 999999999988 35888 999999999999998853 4
Q ss_pred c---cCCcC------CCcC-CCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCC
Q psy5792 138 L---AAKVD------FHAG-ISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHG 207 (377)
Q Consensus 138 ~---~~G~~------~C~~-~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~ 207 (377)
. +.||. +|.. +++||+++.+.. |+++++++... +..++|+.++.++.+++||..+++|||+|...+
T Consensus 296 ~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~--i~~i~l~~~~~--~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~ 371 (619)
T 3s94_A 296 QCACPTGVKLLENGKTCKDGATELLLLARRTD--LRRISLDTPDF--TDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVR 371 (619)
T ss_dssp EEECCTTCCBCTTSSCBCSSCSEEEEEEESSC--EEEEESSSTTC--CCEECCCSCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred eEeCCchheecccCcccCCCCceEEEEEcccc--eEEEecCCCcc--ceeEEeccccCccEEEEEEcCCCeEEEEeCCCC
Confidence 4 88996 8985 678999999888 99999998766 456778888999999999999999999999999
Q ss_pred cEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcC
Q psy5792 208 TISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDP 287 (377)
Q Consensus 208 ~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp 287 (377)
+|+|++++|+..+.++. .++..|.||||||.+++|||||...++|++++++|+.+++++..++..|++||+||
T Consensus 372 ~I~r~~~~g~~~~~v~~-------~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp 444 (619)
T 3s94_A 372 AIRRSFIDGSGSQFVVT-------AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDP 444 (619)
T ss_dssp EEEEEETTSCSCEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEET
T ss_pred eEEEEEcCCCccEEEEE-------CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEc
Confidence 99999999998888887 78889999999999999999999999999999999999999888899999999999
Q ss_pred CCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEEecCCCC
Q psy5792 288 ESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLKLSSNIK 367 (377)
Q Consensus 288 ~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~~~~~~~ 367 (377)
.+|+|||||++..++|+|+++||+.+++++...+.+|+|||+|+.+++|||+|. ..++|++++++|+.++++.. ..+.
T Consensus 445 ~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~-~~~~I~~~~~dG~~~~~~~~-~~l~ 522 (619)
T 3s94_A 445 MVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA-KTDKIEVMNTDGTGRRVLVE-DKIP 522 (619)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEESSSCCCEEEEE-CCCC
T ss_pred CCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC-CCCEEEEEecCCCceEEEec-cCCC
Confidence 999999999986799999999999999999888999999999999999999999 99999999999998887764 5678
Q ss_pred Ccccc
Q psy5792 368 NALLD 372 (377)
Q Consensus 368 ~p~~~ 372 (377)
|||+.
T Consensus 523 ~P~gl 527 (619)
T 3s94_A 523 HIFGF 527 (619)
T ss_dssp SSCCE
T ss_pred CcEEE
Confidence 89764
No 3
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=1e-39 Score=312.01 Aligned_cols=238 Identities=24% Similarity=0.465 Sum_probs=205.9
Q ss_pred C-cCCCCCCceeccccCCCccc---cCCcC------CCc--CCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCC
Q psy5792 118 K-YNKNESKVQQVLGPLSKVSL---AAKVD------FHA--GISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVS 185 (377)
Q Consensus 118 ~-C~~~~g~Cs~~C~~~~~~~~---~~G~~------~C~--~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~ 185 (377)
+ |. ++++|||+|++.++++. +.||. +|+ .++++|+++..+. |+++++++... ...+..+.
T Consensus 2 ~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~--I~~i~~~g~~~-----~~~~~~~~ 73 (349)
T 3v64_C 2 NECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRID--IRQVLPHRSEY-----TLLLNNLE 73 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESSSCCEEEEECBSC--EEEECTTSCCE-----EEEECSCS
T ss_pred cccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccccCceeEeecccc--eEEEeCCCCee-----EEeecCCC
Confidence 5 87 78999999999999998 78997 897 3578999999888 99999988754 23346778
Q ss_pred ceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC
Q psy5792 186 LAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT 265 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~ 265 (377)
+|.++++|+.++.|||+|...++|++++++|+..+.++. .++..|.|||+||.+++|||+|...++|.+++++
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 146 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 146 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence 899999999999999999999999999999988888776 6788899999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCC
Q psy5792 266 GQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSN 345 (377)
Q Consensus 266 g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~ 345 (377)
|..+++++...+..|++||+||.+|+|||+|++..++|+|+++||+.+++++...+.+|+||++|+.+++|||+|. ..+
T Consensus 147 G~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~-~~~ 225 (349)
T 3v64_C 147 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA-KHH 225 (349)
T ss_dssp SCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEET-TTT
T ss_pred CCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEEC-CCC
Confidence 9998888887899999999999999999999974499999999999999988877899999999999999999999 999
Q ss_pred eEEEEEccCCceEEEEecCCCCCcccc
Q psy5792 346 VLESMDYSGGSKMQLKLSSNIKNALLD 372 (377)
Q Consensus 346 ~i~~~~~~G~~~~~~~~~~~~~~p~~~ 372 (377)
+|++++++|+++++++ ...+.+|++.
T Consensus 226 ~I~~~~~dG~~~~~~~-~~~~~~P~gi 251 (349)
T 3v64_C 226 VIERANLDGSHRKAVI-SQGLPHPFAI 251 (349)
T ss_dssp EEEEEETTSCSCEEEE-CSSCSSEEEE
T ss_pred EEEEEeCCCCceEEEE-eCCCCCceEE
Confidence 9999999998887775 3457788764
No 4
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=2.1e-38 Score=308.30 Aligned_cols=243 Identities=24% Similarity=0.417 Sum_probs=214.8
Q ss_pred ccCCC-cCCCCCCceeccccCCCccc---cCCcC------CCcC--CCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEec
Q psy5792 114 IMGIK-YNKNESKVQQVLGPLSKVSL---AAKVD------FHAG--ISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPL 181 (377)
Q Consensus 114 ~~~~~-C~~~~g~Cs~~C~~~~~~~~---~~G~~------~C~~--~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~ 181 (377)
+...+ |. ..++|+|.|.+.+++|. ..||. +|+. ..++|+++.++. |+++++++... + . .+
T Consensus 37 C~dideC~-~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~--I~~i~l~~~~~--~-~--~~ 108 (400)
T 3p5b_L 37 CEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE--VRKMTLDRSEY--T-S--LI 108 (400)
T ss_dssp EEECCCCS-TTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTE--EEEECTTSCSC--E-E--EE
T ss_pred ccCchhhh-ccCCCCCccCCCccceeeeccccccccccccceeeccccceeEEeccce--eEEEccCCcce--e-E--ec
Confidence 34677 87 45799999999999998 78887 8874 568999999987 99999998765 2 2 24
Q ss_pred CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC----CCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCC
Q psy5792 182 SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG----TGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN 257 (377)
Q Consensus 182 ~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G----~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~ 257 (377)
..+..+.++++|+.+++|||+|...++|++++++| +..+.++. ..+..|.||||||.+++|||+|...+
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-------~~~~~p~glavD~~~~~lY~~d~~~~ 181 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------RDIQAPDGLAVDWIHSNIYWTDSVLG 181 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-------SSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-------CCCCCcccEEEEecCCceEEEECCCC
Confidence 67889999999999999999999999999999998 44667776 67889999999999999999999999
Q ss_pred EEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEE
Q psy5792 258 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVY 337 (377)
Q Consensus 258 ~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LY 337 (377)
+|.+++++|..+++++...+..|++|||||.+|+|||+|++..++|++++++|+.+++++...+.+|+|||+|+.+++||
T Consensus 182 ~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 182 TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp EEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred eEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEE
Confidence 99999999999999998889999999999999999999998668999999999999999988899999999999999999
Q ss_pred EEEeCCCCeEEEEEccCCceEEEEec-CCCCCcccc
Q psy5792 338 WCYSVGSNVLESMDYSGGSKMQLKLS-SNIKNALLD 372 (377)
Q Consensus 338 w~d~~~~~~i~~~~~~G~~~~~~~~~-~~~~~p~~~ 372 (377)
|+|. ..++|++++++|+.++++... ..+++|++.
T Consensus 262 ~aD~-~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl 296 (400)
T 3p5b_L 262 WVDS-KLHSISSIDVNGGNRKTILEDEKRLAHPFSL 296 (400)
T ss_dssp EEET-TTTEEEEEETTSCCCEEEEECSSTTSSEEEE
T ss_pred EEEC-CCCEEEEEeCCCCccEEEEeCCCCCCCCEEE
Confidence 9999 999999999999988888764 357899764
No 5
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=320.34 Aligned_cols=241 Identities=24% Similarity=0.429 Sum_probs=212.0
Q ss_pred CCC-cCCCCCCceeccccCCCccc---cCCcC------CCcC--CCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCC
Q psy5792 116 GIK-YNKNESKVQQVLGPLSKVSL---AAKVD------FHAG--ISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSK 183 (377)
Q Consensus 116 ~~~-C~~~~g~Cs~~C~~~~~~~~---~~G~~------~C~~--~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~ 183 (377)
..+ |. ++++|+|.|++.+++|. +.||. +|+. ..++|+++.... |+++++++... ..+ +..
T Consensus 351 dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~--Ir~i~l~~~~~---~~l--~~~ 422 (791)
T 3m0c_C 351 DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE--VRKMTLDRSEY---TSL--IPN 422 (791)
T ss_dssp CCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSS--EEEECTTSCCC---EEE--ECS
T ss_pred cCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeeecccccccccccccc--eeEeeccCCcc---eee--ecC
Confidence 566 76 56899999999999998 78886 8874 567999999888 99999988765 222 356
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC----CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT----GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVI 259 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~----~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I 259 (377)
+..+.+|++|+.+++|||+|...++|++++++|. ..+.++. ..+..|.||||||.+++|||+|...++|
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-------~~l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------RDIQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-------cCCCCcceeeeeecCCcEEEEecCCCeE
Confidence 7889999999999999999999999999999984 4566666 6888999999999999999999999999
Q ss_pred EEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEE
Q psy5792 260 EVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWC 339 (377)
Q Consensus 260 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~ 339 (377)
++++++|+.+++++...+..|++|||||.+|+|||||++..++|++++++|+.+++++...+.+|+|||||+.+++|||+
T Consensus 496 ~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 496 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp EEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEE
Confidence 99999999999999888999999999999999999999856899999999999999999889999999999999999999
Q ss_pred EeCCCCeEEEEEccCCceEEEEec-CCCCCcccc
Q psy5792 340 YSVGSNVLESMDYSGGSKMQLKLS-SNIKNALLD 372 (377)
Q Consensus 340 d~~~~~~i~~~~~~G~~~~~~~~~-~~~~~p~~~ 372 (377)
|. ..++|++++++|..+++++.. ..+++||+.
T Consensus 576 D~-~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gl 608 (791)
T 3m0c_C 576 DS-KLHSISSIDVNGGNRKTILEDEKRLAHPFSL 608 (791)
T ss_dssp ET-TTTEEEEEETTSCSCEEEEECTTTTSSEEEE
T ss_pred eC-CCCcEEEEecCCCceEEEecCCCccCCCCEE
Confidence 99 999999999999999888764 468899864
No 6
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=2.2e-35 Score=301.82 Aligned_cols=304 Identities=17% Similarity=0.279 Sum_probs=249.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE--CCeEEEEcCC-CCceEEEcCCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY--KGRIIYSDAN-DGNIRSINLDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~--~~~ly~td~~-~~~I~~~~~~g~~~ 91 (377)
..|.|+|+|..+++|||+|...++|++++++|+ +++++ ...+..|.+|++. ++.|||||+. ..+|.+++.+|..+
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~-~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV-WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE-CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE-eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 579999999999999999999999999999999 87776 3678899999995 7899999987 68999999999998
Q ss_pred EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 92 TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 92 ~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
+++..... |.||++..... .|++++...+.|.++++++.
T Consensus 159 ~~l~~~~~~P~GlalD~~~~----------------------------------------~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKR----------------------------------------RLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEECSCSSEEEEEEETTTT----------------------------------------EEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCcceEEEccccC----------------------------------------EEEEEECCCCEEEEEcCCCC
Confidence 87776666 99999844332 59999987778999999987
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEc-CCCCcEEEEeccc----------------------
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHR-DGTGRENIIEYVE---------------------- 227 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~-~G~~~~~i~~~~~---------------------- 227 (377)
.. ..+ ...+.+|.|++++ +++|||+|...++|.+++. .|..++++.....
T Consensus 199 ~~---~v~--~~~l~~P~glav~--~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ 271 (628)
T 4a0p_A 199 NR---EVI--ADDLPHPFGLTQY--QDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASS 271 (628)
T ss_dssp SC---EEE--EECCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTT
T ss_pred ce---EEe--eccCCCceEEEEE--CCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccC
Confidence 55 222 3467889999999 6899999999999999985 4443333321000
Q ss_pred -------------c--------------C-------------------------C---------CCCCCCcceEEEeccC
Q psy5792 228 -------------T--------------G-------------------------D---------PTPVDQFTDIAVDWIA 246 (377)
Q Consensus 228 -------------~--------------~-------------------------~---------~~~~~~p~~iavD~~~ 246 (377)
+ . . ..++..+.+|++|+.+
T Consensus 272 ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~ 351 (628)
T 4a0p_A 272 NGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLD 351 (628)
T ss_dssp GGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTT
T ss_pred CCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCC
Confidence 0 0 0 0123457789999999
Q ss_pred CeEEEEcCCCCEEEEEEcCCCeEEEEeeC------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecC
Q psy5792 247 QNIYWSDPKENVIEVARLTGQYRYVLISG------GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI 320 (377)
Q Consensus 247 ~~lYwtd~~~~~I~~~~~~g~~~~~l~~~------~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~ 320 (377)
++|||+|...++|.+++++|.....++.. .+..|.|||+|+.++.|||+|.+ ..+|++++++|+.+++++...
T Consensus 352 ~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~-~~~I~v~~~~G~~~~~l~~~~ 430 (628)
T 4a0p_A 352 KQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEA-TNVINVTRLDGRSVGVVLKGE 430 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCEEEEEEECT
T ss_pred CeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCC-CCEEEEEECCCCeEEEEEeCC
Confidence 99999999999999999999876555543 57789999999999999999985 789999999999988888877
Q ss_pred CCCceEEEEeCCCCEEEEEEeCCCC--eEEEEEccCCceEEEEecCCCCCcc
Q psy5792 321 IMPIKDITLDRKNKRVYWCYSVGSN--VLESMDYSGGSKMQLKLSSNIKNAL 370 (377)
Q Consensus 321 ~~~P~glalD~~~~~LYw~d~~~~~--~i~~~~~~G~~~~~~~~~~~~~~p~ 370 (377)
+..|.+|++|+.++.|||+|. +.. +|++++++|++++++.. ..+..|-
T Consensus 431 l~~Pr~iavdp~~g~ly~tD~-g~~~~~I~r~~~dG~~~~~l~~-~~l~~P~ 480 (628)
T 4a0p_A 431 QDRPRAVVVNPEKGYMYFTNL-QERSPKIERAALDGTEREVLFF-SGLSKPI 480 (628)
T ss_dssp TCCEEEEEEETTTTEEEEEEE-ETTEEEEEEEETTSCSCEEEEC-SSCSCEE
T ss_pred CCceeeEEEecCCCeEEEeec-CCCCCeEEEEeCCCCCcEEEEe-ccCCCcc
Confidence 899999999999999999999 766 89999999998887763 4455553
No 7
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=5.4e-37 Score=297.00 Aligned_cols=241 Identities=24% Similarity=0.464 Sum_probs=203.6
Q ss_pred cCCC-cCCCCCCceeccccCCCccc---cCCcC------CCc--CCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC
Q psy5792 115 MGIK-YNKNESKVQQVLGPLSKVSL---AAKVD------FHA--GISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS 182 (377)
Q Consensus 115 ~~~~-C~~~~g~Cs~~C~~~~~~~~---~~G~~------~C~--~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~ 182 (377)
...+ |. .+++|+|.|++.++++. +.||. +|+ +++++|+++..+. |+++++++... . ..+.
T Consensus 42 ~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~--I~~i~~~~~~~---~--~~~~ 113 (386)
T 3v65_B 42 QDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRID--IRQVLPHRSEY---T--LLLN 113 (386)
T ss_dssp -----------CCTTEEC-----CCEECCTTEEECTTSSCEEECSSCCEEEEECBSC--EEEECTTSCCC---E--EEEC
T ss_pred CccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccccceeEeecCcc--ceeeccCCCcE---E--EEec
Confidence 4667 87 56899999999999988 78886 897 3578999999888 99999988755 2 2345
Q ss_pred CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEE
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVA 262 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~ 262 (377)
.+..|.++++|+.+++|||+|...++|++++++|+..+.++. .++..|.|||+||.+++|||+|...++|.++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~ 186 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVA 186 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-------SSCSCCCCEEEETTTTEEEEEETTTTEEEEC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEE
Confidence 778899999999999999999999999999999988777776 6788899999999999999999999999999
Q ss_pred EcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeC
Q psy5792 263 RLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSV 342 (377)
Q Consensus 263 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~ 342 (377)
+++|..+++++...+..|++||+||.+|+|||+|++..++|+|++++|+.++.++...+.+|+|||+|+.+++|||+|.
T Consensus 187 ~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~- 265 (386)
T 3v65_B 187 NLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA- 265 (386)
T ss_dssp BTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEET-
T ss_pred eCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEEC-
Confidence 9999998888887889999999999999999999974599999999999999999888999999999999999999999
Q ss_pred CCCeEEEEEccCCceEEEEecCCCCCcccc
Q psy5792 343 GSNVLESMDYSGGSKMQLKLSSNIKNALLD 372 (377)
Q Consensus 343 ~~~~i~~~~~~G~~~~~~~~~~~~~~p~~~ 372 (377)
..++|++++++|+.+++++ ...+.+|++.
T Consensus 266 ~~~~I~~~d~dG~~~~~~~-~~~~~~P~gi 294 (386)
T 3v65_B 266 KHHVIERANLDGSHRKAVI-SQGLPHPFAI 294 (386)
T ss_dssp TTTEEEEECTTSCSCEEEE-CSSCSSEEEE
T ss_pred CCCEEEEEeCCCCeeEEEE-ECCCCCceEE
Confidence 9999999999998887775 4557888764
No 8
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=8.2e-36 Score=304.65 Aligned_cols=320 Identities=17% Similarity=0.243 Sum_probs=253.3
Q ss_pred ceeEeeccccCC------------------CCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceE
Q psy5792 2 GYLHVLPYTRNP------------------SFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVV 62 (377)
Q Consensus 2 ~~~~~~~~~~~~------------------~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~ 62 (377)
|+|||.|+..+. .+..|.|+|+|..+++|||+|...++|.+++++|+ +++++ ...+..|.
T Consensus 52 ~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~-~~~l~~P~ 130 (619)
T 3s94_A 52 GLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-WQELDQPR 130 (619)
T ss_dssp TEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSCCC
T ss_pred CEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEE-eCCCCCCc
Confidence 678998885321 13589999999999999999999999999999999 87776 36788999
Q ss_pred EEEE--ECCeEEEEcCC-CCceEEEcCCCCceEEEe-cCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCcc
Q psy5792 63 AAVF--YKGRIIYSDAN-DGNIRSINLDGSNSTVLR-NNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVS 137 (377)
Q Consensus 63 ~lav--~~~~ly~td~~-~~~I~~~~~~g~~~~~~~-~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~ 137 (377)
+|++ .+++|||||+. ..+|.+++.+|...+++. .... |.||++.....
T Consensus 131 ~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~--------------------------- 183 (619)
T 3s94_A 131 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQ--------------------------- 183 (619)
T ss_dssp CEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT---------------------------
T ss_pred eEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCC---------------------------
Confidence 9999 46899999987 578999999999877665 3455 99999854432
Q ss_pred ccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC-C
Q psy5792 138 LAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD-G 216 (377)
Q Consensus 138 ~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~-G 216 (377)
.|++++...+.|.+++++|... ..+ ....+.+|.||+++ +++|||+|..+++|.+++.. |
T Consensus 184 -------------~LY~aD~~~~~I~~~~~dG~~~---~~~-~~~~~~~P~gi~~~--~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 184 -------------KLYWADAKLNFIHKSNLDGTNR---QAV-VKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp -------------EEEEEETTTCCEEEESSSCCEE---C----------CCCEEES--SSEEEEECTTTCSEEEEESSSC
T ss_pred -------------EEEEEeCCCCeEEEecCCCCcc---EEE-EeCCCCCceEEEEe--CCEEEEecCCCCEEEEEECCCC
Confidence 5999997777799999998744 122 12356789999998 56999999999999999874 3
Q ss_pred CCcEEEEecc------------ccC-------------------------------------------------------
Q psy5792 217 TGRENIIEYV------------ETG------------------------------------------------------- 229 (377)
Q Consensus 217 ~~~~~i~~~~------------~~~------------------------------------------------------- 229 (377)
...+.+.... ..+
T Consensus 245 ~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~ 324 (619)
T 3s94_A 245 EGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLAR 324 (619)
T ss_dssp CCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEE
T ss_pred cccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEc
Confidence 2221111000 000
Q ss_pred -------------------CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCC
Q psy5792 230 -------------------DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG 290 (377)
Q Consensus 230 -------------------~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g 290 (377)
...++..|.+|++|+.+++|||+|...++|.+++++|+..++++..++..|.|||+|+.++
T Consensus 325 ~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~ 404 (619)
T 3s94_A 325 RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVAR 404 (619)
T ss_dssp SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccC
Confidence 0012456888999998999999999999999999999888888887889999999999999
Q ss_pred eEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCC-CeEEEEEccCCceEEEEecCCCCCc
Q psy5792 291 YLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGS-NVLESMDYSGGSKMQLKLSSNIKNA 369 (377)
Q Consensus 291 ~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~-~~i~~~~~~G~~~~~~~~~~~~~~p 369 (377)
.|||+|.+ ..+|++++++|+.+++++.+.+..|.+|++|+.++.|||+|. +. .+|++++++|++++++. ...+..|
T Consensus 405 ~lY~tD~~-~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~-g~~~~I~r~~~dG~~~~~l~-~~~l~~P 481 (619)
T 3s94_A 405 NLYWTDTG-TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDW-GEIPKIERAALDGSDRVVLV-NTSLGWP 481 (619)
T ss_dssp EEEEEETT-TTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEEC-SSSCEEEEEETTSCSCEEEE-CSSCSCE
T ss_pred cEEEEeCC-CCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecC-CCCCEEEEEccCCCccEEEE-eCCCCCC
Confidence 99999986 789999999999999999878999999999999999999998 54 89999999999887765 4455555
Q ss_pred cc
Q psy5792 370 LL 371 (377)
Q Consensus 370 ~~ 371 (377)
-+
T Consensus 482 ~G 483 (619)
T 3s94_A 482 NG 483 (619)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 9
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=2.9e-34 Score=270.60 Aligned_cols=211 Identities=27% Similarity=0.541 Sum_probs=186.3
Q ss_pred CCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc-EEEEecc
Q psy5792 148 ISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR-ENIIEYV 226 (377)
Q Consensus 148 ~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~-~~i~~~~ 226 (377)
++++|+++.++. |+++++++... +...++.++..+.++++|+.++.|||+|...++|++++++|+.. +.++.
T Consensus 3 ~~p~ll~~~~~~--I~~i~l~~~~~---~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-- 75 (318)
T 3sov_A 3 SAPLLLYANRRD--LRLVDATNGKE---NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-- 75 (318)
T ss_dssp -CCEEEEECEEE--EEEEETTCTTS---CCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE--
T ss_pred CccEEEEEccCe--EEEEECCCCce---EEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc--
Confidence 568999999887 99999998753 22344556778999999999999999999999999999998753 44555
Q ss_pred ccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 227 ETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
.++..|.|||+||.+++|||+|...++|.+++++|..+++++...+..|++||+||.+|+|||+|++..++|+|+
T Consensus 76 -----~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~ 150 (318)
T 3sov_A 76 -----SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERA 150 (318)
T ss_dssp -----ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEE
T ss_pred -----CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEE
Confidence 578889999999999999999999999999999999988888778999999999999999999998767999999
Q ss_pred ecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEEecCCCCCcccc
Q psy5792 307 GLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLKLSSNIKNALLD 372 (377)
Q Consensus 307 ~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~~~~~~~~p~~~ 372 (377)
+++|+.+++++...+.+|+||++|+.+++|||+|. ..++|++++++|++++++.. ..+.+|++.
T Consensus 151 ~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~-~~~~I~~~d~dG~~~~~~~~-~~~~~P~gl 214 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA-KLNFIHKSNLDGTNRQAVVK-GSLPHPFAL 214 (318)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEC-SCCSCEEEE
T ss_pred EcCCCCeEEEEECCCCCccEEEEeccCCEEEEEEC-CCCEEEEEcCCCCceEEEec-CCCCCceEE
Confidence 99999999998877999999999999999999999 99999999999988887763 457888764
No 10
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=9.7e-33 Score=263.62 Aligned_cols=248 Identities=19% Similarity=0.308 Sum_probs=209.0
Q ss_pred ccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcCCCCceEEEecC
Q psy5792 21 TLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINLDGSNSTVLRNN 97 (377)
Q Consensus 21 ~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~ 97 (377)
.+.+. .+.|+++. .+.|++++++|. .+.++ ..+..|.||++ .+++|||+|...++|++++.+|...+.+.
T Consensus 39 ~~~~~-~~~ll~~~--~~~I~~i~~~g~~~~~~~--~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-- 111 (349)
T 3v64_C 39 KALGP-EPVLLFAN--RIDIRQVLPHRSEYTLLL--NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-- 111 (349)
T ss_dssp EESSS-CCEEEEEC--BSCEEEECTTSCCEEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--
T ss_pred ccccc-CceeEeec--ccceEEEeCCCCeeEEee--cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE--
Confidence 34444 56787774 466999999999 87776 77889999999 47899999999999988886654322110
Q ss_pred CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEE
Q psy5792 98 AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQV 177 (377)
Q Consensus 98 ~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~ 177 (377)
T Consensus 112 -------------------------------------------------------------------------------- 111 (349)
T 3v64_C 112 -------------------------------------------------------------------------------- 111 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC-
Q psy5792 178 LGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE- 256 (377)
Q Consensus 178 ~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~- 256 (377)
..++..|.++++|+.+++|||+|...++|.+++++|+.++.+.. ..+..|.+||+|+.+++|||+|...
T Consensus 112 ---~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-------~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 112 ---STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-------QSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp ---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------TTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred ---eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-------CCCCCcceEEEecCcCeEEEeccCCC
Confidence 11234578899999999999999999999999999998888876 6788999999999999999999988
Q ss_pred CEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEE
Q psy5792 257 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRV 336 (377)
Q Consensus 257 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~L 336 (377)
++|++++++|+.+++++..++..|.|||+||.+++|||+|++ ..+|++++++|+.+++++...+.+|.||+++ +++|
T Consensus 182 ~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~-~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~l 258 (349)
T 3v64_C 182 PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSL 258 (349)
T ss_dssp CEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECC-CCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEE
Confidence 999999999999888887789999999999999999999986 6899999999999998888778999999995 6899
Q ss_pred EEEEeCCCCeEEEEE-ccCCceEEEEecCCCCCccc
Q psy5792 337 YWCYSVGSNVLESMD-YSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 337 Yw~d~~~~~~i~~~~-~~G~~~~~~~~~~~~~~p~~ 371 (377)
||+|+ ..++|.+++ .+|...+++.. .+.+|++
T Consensus 259 y~td~-~~~~V~~~~~~~G~~~~~i~~--~~~~p~g 291 (349)
T 3v64_C 259 YWTDW-HTKSINSANKFTGKNQEIIRN--KLHFPMD 291 (349)
T ss_dssp EEEET-TTTEEEEEETTTCCSCEEEEC--SCSCCCC
T ss_pred EEecC-CCCeEEEEEccCCCccEEecc--CCCCCce
Confidence 99999 999999999 78877776653 3445543
No 11
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=2.8e-32 Score=256.92 Aligned_cols=209 Identities=27% Similarity=0.507 Sum_probs=181.8
Q ss_pred CcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC----CCcEEEEe
Q psy5792 149 SDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG----TGRENIIE 224 (377)
Q Consensus 149 ~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G----~~~~~i~~ 224 (377)
+++|+++.++. |+++++++... .. + +..+.+|.++++|+.+++|||+|...++|++++++| +..+.++.
T Consensus 1 ~~~ll~~~~~~--I~~i~~~~~~~--~~-~--~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 1 IAYLFFTNRHE--VRKMTLDRSEY--TS-L--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp CCEEEEECBSS--EEEEETTSCCC--EE-E--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred CCEEEEECCCe--EEEEECCCcce--Ee-h--hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 36899999988 99999998765 22 2 356788999999999999999999999999999997 55566665
Q ss_pred ccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5792 225 YVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIA 304 (377)
Q Consensus 225 ~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~ 304 (377)
..+..|.+||+||.+++|||+|...++|.+++++|+.+++++...+..|++||+||.+|+|||+|++..++|+
T Consensus 74 -------~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~ 146 (316)
T 1ijq_A 74 -------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIK 146 (316)
T ss_dssp -------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred -------CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEE
Confidence 5678899999999999999999999999999999999888888778999999999999999999997458999
Q ss_pred EEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEEec-CCCCCcccc
Q psy5792 305 RAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLKLS-SNIKNALLD 372 (377)
Q Consensus 305 r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~~~-~~~~~p~~~ 372 (377)
++++||+.+++++...+.+|+||++|+.+++|||+|. ..++|++++++|++++++... ..+.+|++.
T Consensus 147 ~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~-~~~~I~~~d~dg~~~~~~~~~~~~~~~P~gi 214 (316)
T 1ijq_A 147 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILEDEKRLAHPFSL 214 (316)
T ss_dssp EEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEECTTTTSSEEEE
T ss_pred EEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEEC-CCCeEEEEecCCCceEEEeecCCccCCcEEE
Confidence 9999999999888777899999999999999999999 999999999999888887653 357788753
No 12
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=6.9e-32 Score=262.30 Aligned_cols=247 Identities=20% Similarity=0.320 Sum_probs=203.9
Q ss_pred CCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecCCCceeE
Q psy5792 27 GPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNNAGISDF 103 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~p~~i 103 (377)
.++|+++. .+.|+++++++. .+.++ ..+..|.||++. +++|||+|..+++|++++.+|.... .
T Consensus 83 ~~~ll~~~--~~~I~~i~l~~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~--~-------- 148 (400)
T 3p5b_L 83 IAYLFFTN--RHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV--S-------- 148 (400)
T ss_dssp SCEEEEEE--TTEEEEECTTSCSCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------C--------
T ss_pred cceeEEec--cceeEEEccCCcceeEec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC--C--------
Confidence 35776664 578999999999 77777 778999999994 7899999999999998886552200 0
Q ss_pred EeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCC
Q psy5792 104 ILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSK 183 (377)
Q Consensus 104 ~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~ 183 (377)
. .. .+....
T Consensus 149 ------------------------------------------------------~---~~--------------~~~~~~ 157 (400)
T 3p5b_L 149 ------------------------------------------------------S---YD--------------TVISRD 157 (400)
T ss_dssp ------------------------------------------------------C---CE--------------EEECSS
T ss_pred ------------------------------------------------------c---ce--------------EEEeCC
Confidence 0 00 001123
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC-CCEEEEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK-ENVIEVA 262 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~-~~~I~~~ 262 (377)
+..|.++++|+.++.|||+|...++|.+++++|..+++++. ..+..|.+||+|+.+++|||||.. .++|+++
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-------CCCCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 45689999999999999999999999999999998888887 688899999999999999999976 4899999
Q ss_pred EcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec--CCCCceEEEEeCCCCEEEEEE
Q psy5792 263 RLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE--IIMPIKDITLDRKNKRVYWCY 340 (377)
Q Consensus 263 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~--~~~~P~glalD~~~~~LYw~d 340 (377)
+++|..+++++...+..|.|||+|+.+++|||+|.+ ..+|++++++|+.+++++.. .+.+|.||+++ +++|||+|
T Consensus 231 ~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd 307 (400)
T 3p5b_L 231 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTD 307 (400)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEE
T ss_pred eCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC-CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEec
Confidence 999999989988889999999999999999999985 78999999999999988875 37899999995 68999999
Q ss_pred eCCCCeEEEEE-ccCCceEEEEecCCCCCccc
Q psy5792 341 SVGSNVLESMD-YSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 341 ~~~~~~i~~~~-~~G~~~~~~~~~~~~~~p~~ 371 (377)
+ ..++|.+++ .+|...+++. ..+.+|++
T Consensus 308 ~-~~~~V~~~~~~~G~~~~~i~--~~~~~p~~ 336 (400)
T 3p5b_L 308 I-INEAIFSANRLTGSDVNLLA--ENLLSPED 336 (400)
T ss_dssp S-SSCSEEEEESSSCCCCEEEE--CSCSCEEE
T ss_pred C-CCCeEEEEEcCCCCceEEEe--cCCCCCce
Confidence 9 999999999 6777766664 34445543
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=7.5e-32 Score=254.09 Aligned_cols=243 Identities=21% Similarity=0.359 Sum_probs=202.0
Q ss_pred CCeEEEEeCCCCcEEEEEcCCc---EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCce-EEEecCCCc
Q psy5792 27 GPFVYGVKTLSHSLHYVNIEVK---VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNS-TVLRNNAGI 100 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~dG~---~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~p 100 (377)
.++|+++ +...|.+++++|. .+.++ ..+..|.+|++. +++|||+|...++|++++.+|... ..
T Consensus 4 ~p~ll~~--~~~~I~~i~l~~~~~~~~~~~--~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~------- 72 (318)
T 3sov_A 4 APLLLYA--NRRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN------- 72 (318)
T ss_dssp CCEEEEE--CEEEEEEEETTCTTSCCEEEE--EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCE-------
T ss_pred ccEEEEE--ccCeEEEEECCCCceEEEEEe--cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEE-------
Confidence 4567666 4678999999997 33444 567789999994 789999999999999888655321 00
Q ss_pred eeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEe
Q psy5792 101 SDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGP 180 (377)
Q Consensus 101 ~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~ 180 (377)
+.
T Consensus 73 -------------------------------------------------------------~~----------------- 74 (318)
T 3sov_A 73 -------------------------------------------------------------VV----------------- 74 (318)
T ss_dssp -------------------------------------------------------------EE-----------------
T ss_pred -------------------------------------------------------------EE-----------------
Confidence 00
Q ss_pred cCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC-CCEE
Q psy5792 181 LSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK-ENVI 259 (377)
Q Consensus 181 ~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~-~~~I 259 (377)
..++..|.++++|+.++.|||+|...++|.+++++|..++++.. ..+..|.+||+|+..++|||+|.. .++|
T Consensus 75 ~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-------~~~~~P~giavdp~~g~ly~td~~~~~~I 147 (318)
T 3sov_A 75 VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-------QELDQPRAIALDPSSGFMYWTDWGEVPKI 147 (318)
T ss_dssp EECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSSEEEEEEEGGGTEEEEEECSSSCEE
T ss_pred cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe-------CCCCCccEEEEeCCCCEEEEEecCCCCEE
Confidence 01234578999999999999999999999999999998888886 678899999999999999999975 6899
Q ss_pred EEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEE
Q psy5792 260 EVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWC 339 (377)
Q Consensus 260 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~ 339 (377)
++++++|+.+++++..++..|.|||+||.++.|||+|.+ ..+|++++++|+.+++++...+..|.||++| ++.|||+
T Consensus 148 ~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywt 224 (318)
T 3sov_A 148 ERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK-LNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWT 224 (318)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEE
T ss_pred EEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC-CCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEE
Confidence 999999999888888789999999999999999999985 7999999999999999888668999999997 5799999
Q ss_pred EeCCCCeEEEEEc-cCCceEEEEecCCCCCccc
Q psy5792 340 YSVGSNVLESMDY-SGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 340 d~~~~~~i~~~~~-~G~~~~~~~~~~~~~~p~~ 371 (377)
|. ..++|.+++. +|...+++.. .+.+|++
T Consensus 225 d~-~~~~V~~~~~~~G~~~~~i~~--~~~~P~~ 254 (318)
T 3sov_A 225 DW-STHSILACNKYTGEGLREIHS--DIFSPMD 254 (318)
T ss_dssp ET-TTTEEEEEETTTCCSCEEEEC--CCSSCCC
T ss_pred ec-CCCeEEEEECCCCCceEEEeC--CCCCCcE
Confidence 99 9999999998 5766666643 3445543
No 14
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1e-31 Score=259.89 Aligned_cols=248 Identities=19% Similarity=0.307 Sum_probs=208.5
Q ss_pred ccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecC
Q psy5792 21 TLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNN 97 (377)
Q Consensus 21 ~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~ 97 (377)
.+++. .+.|++++ .+.|++++++|. .+.++ ..+..|.||++. +++|||+|...++|++++.+|...+.+.
T Consensus 82 ~~~~~-~~~l~~~~--~~~I~~i~~~~~~~~~~~--~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-- 154 (386)
T 3v65_B 82 KALGP-EPVLLFAN--RIDIRQVLPHRSEYTLLL--NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-- 154 (386)
T ss_dssp EECSS-CCEEEEEC--BSCEEEECTTSCCCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE--
T ss_pred CCccc-cceeEeec--CccceeeccCCCcEEEEe--cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE--
Confidence 34444 56776664 467999999999 77776 778899999994 7899999999999998886664322211
Q ss_pred CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEE
Q psy5792 98 AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQV 177 (377)
Q Consensus 98 ~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~ 177 (377)
T Consensus 155 -------------------------------------------------------------------------------- 154 (386)
T 3v65_B 155 -------------------------------------------------------------------------------- 154 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC-
Q psy5792 178 LGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE- 256 (377)
Q Consensus 178 ~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~- 256 (377)
..++..|.++++|+.++.|||+|...++|.+++++|+.++.++. .++..|.+||+|+.+++|||+|...
T Consensus 155 ---~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-------~~l~~P~giavdp~~g~ly~td~~~~ 224 (386)
T 3v65_B 155 ---STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-------QSLEKPRAIALHPMEGTIYWTDWGNT 224 (386)
T ss_dssp ---CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-------SSCSCEEEEEEETTTTEEEEEECSSS
T ss_pred ---eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-------CCCCCCcEEEEEcCCCeEEEeccCCC
Confidence 01233577899999999999999999999999999998888887 6788999999999999999999988
Q ss_pred CEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEE
Q psy5792 257 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRV 336 (377)
Q Consensus 257 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~L 336 (377)
++|++++++|+.+++++..++..|.|||+||.+++|||+|.+ ..+|++++++|+.+++++...+.+|.||+++ +++|
T Consensus 225 ~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~l 301 (386)
T 3v65_B 225 PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSL 301 (386)
T ss_dssp CEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT-TTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC-CCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEE
Confidence 999999999999988888789999999999999999999986 7899999999999998888778999999995 6899
Q ss_pred EEEEeCCCCeEEEEE-ccCCceEEEEecCCCCCccc
Q psy5792 337 YWCYSVGSNVLESMD-YSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 337 Yw~d~~~~~~i~~~~-~~G~~~~~~~~~~~~~~p~~ 371 (377)
||+|+ ..++|.+++ .+|...+++.. .+.+|++
T Consensus 302 y~td~-~~~~V~~~~~~~G~~~~~i~~--~~~~p~g 334 (386)
T 3v65_B 302 YWTDW-HTKSINSANKFTGKNQEIIRN--KLHFPMD 334 (386)
T ss_dssp EEEET-TTTEEEEEETTTCCSCEEEEC--SCSCCCC
T ss_pred EEeeC-CCCeEEEEECCCCcceEEEcc--CCCCCce
Confidence 99999 999999999 68777776653 3444543
No 15
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.9e-31 Score=278.13 Aligned_cols=246 Identities=20% Similarity=0.322 Sum_probs=202.7
Q ss_pred CeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecCCCceeEE
Q psy5792 28 PFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNNAGISDFI 104 (377)
Q Consensus 28 ~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~p~~i~ 104 (377)
..|+++ +...|+++++++. ...++ ..+..|.||++. +++|||+|..+++|++++.+|.....
T Consensus 396 p~Ll~a--n~~~Ir~i~l~~~~~~~l~--~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~----------- 460 (791)
T 3m0c_C 396 AYLFFT--NRHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS----------- 460 (791)
T ss_dssp CEEEEE--CBSSEEEECTTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------
T ss_pred cccccc--cccceeEeeccCCcceeee--cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-----------
Confidence 466555 5577999999999 77777 778999999994 78999999999999988865522100
Q ss_pred eeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCC
Q psy5792 105 LFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKV 184 (377)
Q Consensus 105 v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~ 184 (377)
. . ..+....+
T Consensus 461 -----------------------------------------------------~---~--------------~~vi~~~l 470 (791)
T 3m0c_C 461 -----------------------------------------------------S---Y--------------DTVISRDI 470 (791)
T ss_dssp ---------------------------------------------------------C--------------EEEECSSC
T ss_pred -----------------------------------------------------c---e--------------eEEEecCC
Confidence 0 0 00011244
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC-CEEEEEE
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE-NVIEVAR 263 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~-~~I~~~~ 263 (377)
..|.||++|+.+++|||+|...++|.+++++|+.+++++. ..+..|.+|||||.+++|||||... ++|++++
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 5689999999999999999999999999999999888887 7888999999999999999999876 8999999
Q ss_pred cCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec--CCCCceEEEEeCCCCEEEEEEe
Q psy5792 264 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE--IIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 264 ~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~--~~~~P~glalD~~~~~LYw~d~ 341 (377)
++|..+++++...+..|.|||||+.+++|||+|++ ..+|++++++|+.+++++.. .+.+|.||+++ +++|||+|+
T Consensus 544 ~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~-~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~ 620 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 620 (791)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred cCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC-CCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence 99999999998889999999999999999999986 78999999999999998875 36788888884 679999999
Q ss_pred CCCCeEEEEE-ccCCceEEEEecCCCCCccc
Q psy5792 342 VGSNVLESMD-YSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 342 ~~~~~i~~~~-~~G~~~~~~~~~~~~~~p~~ 371 (377)
..++|++++ ++|.+++++. ..+.+|++
T Consensus 621 -~~~~I~~~dk~tG~~~~~l~--~~l~~P~~ 648 (791)
T 3m0c_C 621 -INEAIFSANRLTGSDVNLLA--ENLLSPED 648 (791)
T ss_dssp -TTTEEEEEETTTCCCCEEEE--CSCSCCCC
T ss_pred -CCCEEEEEeCCCCcceEEee--cCCCCcee
Confidence 999999998 5666666664 34555654
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=9e-31 Score=246.55 Aligned_cols=246 Identities=20% Similarity=0.319 Sum_probs=200.0
Q ss_pred CeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecCCCceeEE
Q psy5792 28 PFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNNAGISDFI 104 (377)
Q Consensus 28 ~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~p~~i~ 104 (377)
+.|+++ ..+.|.++++++. ...++ ..+..|.|+++. +++|||+|...++|++++.+|... ..
T Consensus 2 ~~ll~~--~~~~I~~i~~~~~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~---~~-------- 66 (316)
T 1ijq_A 2 AYLFFT--NRHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG---VS-------- 66 (316)
T ss_dssp CEEEEE--CBSSEEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------
T ss_pred CEEEEE--CCCeEEEEECCCcceEehh--cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC---Cc--------
Confidence 467666 4567999999999 76676 778999999994 679999999999999888654210 00
Q ss_pred eeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCC
Q psy5792 105 LFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKV 184 (377)
Q Consensus 105 v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~ 184 (377)
. .. .+. ...+
T Consensus 67 ------------------------------------------------------~--~~-------------~~~-~~~~ 76 (316)
T 1ijq_A 67 ------------------------------------------------------S--YD-------------TVI-SRDI 76 (316)
T ss_dssp ---------------------------------------------------------CE-------------EEE-CSSC
T ss_pred ------------------------------------------------------c--cE-------------EEE-eCCC
Confidence 0 00 000 0123
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC-CEEEEEE
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE-NVIEVAR 263 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~-~~I~~~~ 263 (377)
..|.++++|+.++.|||+|...++|.+++++|..+++++. ..+..|.+||+|+.+++|||+|... ++|++++
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 4688999999899999999999999999999988777776 6788999999999999999999876 8999999
Q ss_pred cCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec--CCCCceEEEEeCCCCEEEEEEe
Q psy5792 264 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE--IIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 264 ~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~--~~~~P~glalD~~~~~LYw~d~ 341 (377)
++|+.+++++...+..|.|||+|+.+++|||+|.+ ..+|++++++|+.+++++.. .+.+|.||++| +++|||+|.
T Consensus 150 ~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~ 226 (316)
T 1ijq_A 150 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 226 (316)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred CCCCCeEEEEECCCCCceEEEEeccCCEEEEEECC-CCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEEC
Confidence 99999888887778999999999999999999985 78999999999999988774 37899999997 589999999
Q ss_pred CCCCeEEEEEc-cCCceEEEEecCCCCCccc
Q psy5792 342 VGSNVLESMDY-SGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 342 ~~~~~i~~~~~-~G~~~~~~~~~~~~~~p~~ 371 (377)
..++|.+++. +|...+++.. .+.+|++
T Consensus 227 -~~~~V~~~~~~~g~~~~~i~~--~~~~p~~ 254 (316)
T 1ijq_A 227 -INEAIFSANRLTGSDVNLLAE--NLLSPED 254 (316)
T ss_dssp -TTTEEEEEETTTCCCCEEEEC--SCSCCCC
T ss_pred -CCCeEEEEeCCCCcceEEEec--CCCCceE
Confidence 9999999996 6766666643 3455544
No 17
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1.5e-33 Score=291.95 Aligned_cols=241 Identities=24% Similarity=0.420 Sum_probs=205.2
Q ss_pred CCC-cCCCCCCceeccccCCCccc---cCCcC------CCcC--CCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCC
Q psy5792 116 GIK-YNKNESKVQQVLGPLSKVSL---AAKVD------FHAG--ISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSK 183 (377)
Q Consensus 116 ~~~-C~~~~g~Cs~~C~~~~~~~~---~~G~~------~C~~--~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~ 183 (377)
..+ |. .+++|+|.|++.+++|. +.||. +|+. ..++|++++.+. |+++++++... ...+..
T Consensus 333 dideC~-~~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~--I~~id~~~~~~-----~~~~~~ 404 (699)
T 1n7d_A 333 DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE--VRKMTLDRSEY-----TSLIPN 404 (699)
T ss_dssp CCCCCS-SSSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC---CEECTTSCCE-----ECCSCC
T ss_pred CccccC-CCCccccccccCCCCeeeeeecccccCCCCCcccccccceeEEecCccc--eEEEeCCCCcc-----eeeecc
Confidence 556 65 35789999999999998 88987 8874 567899998887 99999987644 223456
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC----CCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG----TGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVI 259 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G----~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I 259 (377)
+.+|.++++|+.+++|||+|...++|++++++| +..+.++. ..+..|.+|||||.+++|||+|...++|
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~-------~~~~~P~glavD~~~g~LY~tD~~~~~I 477 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------RDIQAPDGLAVDWIHSNIYWTDSVLGTV 477 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-------SCC--CCCEECCCSSSBCEECCTTTSCE
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-------CCCCCcceEEEEeeCCcEEEEeccCCeE
Confidence 778999999999999999999999999999997 44444444 4677899999999999999999999999
Q ss_pred EEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEE
Q psy5792 260 EVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWC 339 (377)
Q Consensus 260 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~ 339 (377)
.+++++|..+++++...+..|++|||||.+|+|||+|++..++|++++++|+.+++++...+.+|+|||+|+.+++|||+
T Consensus 478 ~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 478 SVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp EEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred EEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEE
Confidence 99999999988888877899999999999999999998755899999999999988887778999999999999999999
Q ss_pred EeCCCCeEEEEEccCCceEEEEec-CCCCCcccc
Q psy5792 340 YSVGSNVLESMDYSGGSKMQLKLS-SNIKNALLD 372 (377)
Q Consensus 340 d~~~~~~i~~~~~~G~~~~~~~~~-~~~~~p~~~ 372 (377)
|. ..++|++++++|+++++++.. ..+++|++.
T Consensus 558 D~-~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gl 590 (699)
T 1n7d_A 558 DS-KLHSISSIDVNGGNRKTILEDEKRLAHPFSL 590 (699)
T ss_dssp ET-TTTEEEEECSSSSCCEEECCCSSSCSSCCCC
T ss_pred ec-CCCeEEEEccCCCceEEEEecCCcCCCceEe
Confidence 99 999999999999888877653 457788764
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.97 E-value=2e-27 Score=217.49 Aligned_cols=245 Identities=18% Similarity=0.255 Sum_probs=194.8
Q ss_pred CeEEEEeCCCCcEEEEEcCCc-EE-----EEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecCCC
Q psy5792 28 PFVYGVKTLSHSLHYVNIEVK-VA-----KVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNNAG 99 (377)
Q Consensus 28 ~~ly~~d~~~~~I~~~~~dG~-~~-----~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~ 99 (377)
++|||++. +.|++++++|+ .+ .++. ....+|.++++. +++|||+|...++|.+++.+|.....+.
T Consensus 2 ~~l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---- 74 (267)
T 1npe_A 2 THLLFAQT--GKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII---- 74 (267)
T ss_dssp EEEEEEEE--EEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE----
T ss_pred cEEEEEcC--CeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE----
Confidence 57899875 58999999998 53 2331 234689999994 6799999999888888886553321110
Q ss_pred ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEE
Q psy5792 100 ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLG 179 (377)
Q Consensus 100 p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~ 179 (377)
T Consensus 75 -------------------------------------------------------------------------------- 74 (267)
T 1npe_A 75 -------------------------------------------------------------------------------- 74 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC--CC
Q psy5792 180 PLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK--EN 257 (377)
Q Consensus 180 ~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~--~~ 257 (377)
...+..|.++++|+.+++|||+|...++|.+++++|...+.+.. .++..|.+|++|+.+++|||++.. .+
T Consensus 75 -~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-------~~~~~P~~i~vd~~~g~lyv~~~~~~~~ 146 (267)
T 1npe_A 75 -RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-------TGLVNPRGIVTDPVRGNLYWTDWNRDNP 146 (267)
T ss_dssp -CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSSEEEEEEETTTTEEEEEECCSSSC
T ss_pred -ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-------CCCCCccEEEEeeCCCEEEEEECCCCCc
Confidence 01234688999999889999999999999999999987777765 567789999999888999999987 67
Q ss_pred EEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEE
Q psy5792 258 VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVY 337 (377)
Q Consensus 258 ~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LY 337 (377)
+|++++++|...+++....+..|.+|++|+.+++|||+|.+ ..+|.+++++|..++.+... +..|.||++| +++||
T Consensus 147 ~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~-~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~ly 222 (267)
T 1npe_A 147 KIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAG-THRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLY 222 (267)
T ss_dssp EEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEE
T ss_pred EEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECC-CCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEE
Confidence 99999999988877776678899999999989999999986 68999999999877777664 7899999997 58999
Q ss_pred EEEeCCCCeEEEEEccCCceEEEEecCCCCCcccc
Q psy5792 338 WCYSVGSNVLESMDYSGGSKMQLKLSSNIKNALLD 372 (377)
Q Consensus 338 w~d~~~~~~i~~~~~~G~~~~~~~~~~~~~~p~~~ 372 (377)
|++. ..++|.+++.+++.....+.....+.|++.
T Consensus 223 va~~-~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi 256 (267)
T 1npe_A 223 YTDW-KTNSVIAMDLAISKEMDTFHPHKQTRLYGI 256 (267)
T ss_dssp EEET-TTTEEEEEETTTTEEEEEECCSSCCCCCCE
T ss_pred EEEC-CCCeEEEEeCCCCCceEEEcccccccccee
Confidence 9999 999999999985543333322233456543
No 19
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.95 E-value=1.5e-28 Score=254.55 Aligned_cols=246 Identities=20% Similarity=0.317 Sum_probs=194.6
Q ss_pred CeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecCCCceeEE
Q psy5792 28 PFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNNAGISDFI 104 (377)
Q Consensus 28 ~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~p~~i~ 104 (377)
..|+++ +.+.|.++++++. .+.++ ..+..|.||++. +++|||+|...++|++++.+|.... .
T Consensus 378 ~~ll~~--~~~~I~~id~~~~~~~~~~--~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~---~-------- 442 (699)
T 1n7d_A 378 AYLFFT--NRHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV---S-------- 442 (699)
T ss_dssp CCBCCC--CTTC-CEECTTSCCEECCS--CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC----C--------
T ss_pred eeEEec--CccceEEEeCCCCcceeee--ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC---c--------
Confidence 455444 5678999999999 77665 678899999994 7899999999999999886552100 0
Q ss_pred eeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCC
Q psy5792 105 LFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKV 184 (377)
Q Consensus 105 v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~ 184 (377)
. . ..+....+
T Consensus 443 ------~--------------------------------------------------~--------------~~~i~~~~ 452 (699)
T 1n7d_A 443 ------S--------------------------------------------------Y--------------DTVISRDI 452 (699)
T ss_dssp ------C--------------------------------------------------C--------------CCBCCSCC
T ss_pred ------c--------------------------------------------------e--------------EEEEeCCC
Confidence 0 0 00000123
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC-CEEEEEE
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE-NVIEVAR 263 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~-~~I~~~~ 263 (377)
..|.+|++|+.+++|||+|...++|.+++++|..+++++. ..+..|.+||||+..++|||+|... ++|++++
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-------~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC-------CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe-------CCCCCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 4578899999899999999999999999999988777776 6778899999999999999999875 8999999
Q ss_pred cCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec--CCCCceEEEEeCCCCEEEEEEe
Q psy5792 264 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE--IIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 264 ~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~--~~~~P~glalD~~~~~LYw~d~ 341 (377)
++|+.+++++...+..|+|||+||.+++|||+|.+ ..+|++++++|+.+++++.. .+.+|.||++|. ++|||+|+
T Consensus 526 ~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~-~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~ 602 (699)
T 1n7d_A 526 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDI 602 (699)
T ss_dssp SSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT-TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECS
T ss_pred CCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC-CCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeC
Confidence 99998888887778999999999999999999985 78999999999999888763 378899999974 69999999
Q ss_pred CCCCeEEEEEcc-CCceEEEEecCCCCCccc
Q psy5792 342 VGSNVLESMDYS-GGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 342 ~~~~~i~~~~~~-G~~~~~~~~~~~~~~p~~ 371 (377)
..++|.+++.. |...+++ ...+.+|++
T Consensus 603 -~~~~V~~~d~~~G~~~~~i--~~~~~~P~~ 630 (699)
T 1n7d_A 603 -INEAIFSANRLTGSDVNLL--AENLLSPED 630 (699)
T ss_dssp -TTTCEEEEETTTEEEEECC--CTTCSSCCC
T ss_pred -CCCeEEEEEccCCCceEEe--ecCCCCCcE
Confidence 99999999975 4433333 233445543
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.95 E-value=5e-26 Score=208.24 Aligned_cols=209 Identities=24% Similarity=0.472 Sum_probs=174.3
Q ss_pred cEEEEEeCCCCeEEEEEcCCCCceee--EEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccc
Q psy5792 150 DFILFSVNSGYDIMGIKYNKNESKVT--QVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVE 227 (377)
Q Consensus 150 ~~l~~s~~~~~~I~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~ 227 (377)
++|++++.+. |+++++++...+.. ..++. ....+|.++++|+.+++|||+|...++|++++++|...+.++.
T Consensus 2 ~~l~~~~~~~--I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--- 75 (267)
T 1npe_A 2 THLLFAQTGK--IERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR--- 75 (267)
T ss_dssp EEEEEEEEEE--EEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC---
T ss_pred cEEEEEcCCe--EEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE---
Confidence 4789988765 99999998753100 11221 1235789999999899999999999999999999987777665
Q ss_pred cCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCC-CCeEEEE
Q psy5792 228 TGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK-IPLIARA 306 (377)
Q Consensus 228 ~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~-~~~I~r~ 306 (377)
.++..|.+|++|+.+++|||+|...++|.+++++|...+++...++..|++|++||.+++|||+|++. .++|+++
T Consensus 76 ----~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 76 ----QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp ----TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred ----CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 56788999999998999999999999999999999887777776678999999999899999999863 5799999
Q ss_pred ecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEEecCCCCCccc
Q psy5792 307 GLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 307 ~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~~~~~~~~p~~ 371 (377)
.++|+..+++....+..|+||++|+.+++|||+|. ..++|.+++++|..++++.. ...+|++
T Consensus 152 ~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~--~~~~P~g 213 (267)
T 1npe_A 152 HMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA-GTHRAECLNPAQPGRRKVLE--GLQYPFA 213 (267)
T ss_dssp ETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTEEEEEEEEE--CCCSEEE
T ss_pred ecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC-CCCEEEEEecCCCceEEEec--CCCCceE
Confidence 99999888887666889999999988899999999 99999999999876665543 3456654
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.93 E-value=8.5e-24 Score=197.29 Aligned_cols=272 Identities=17% Similarity=0.208 Sum_probs=204.4
Q ss_pred CCCCcCCccccccCCCCeEEEEeCC-CCcEEEEEcCCc-EEEEEeCCCCCceEEEEEECCeEEEEcCCC-----------
Q psy5792 12 NPSFGAVASTLKPQSGPFVYGVKTL-SHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFYKGRIIYSDAND----------- 78 (377)
Q Consensus 12 ~~~~~~~~~~~~d~~~~~ly~~d~~-~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~~~~ly~td~~~----------- 78 (377)
|.+.+-..+-.+-.+++.||+.... .++|++++.||+ .+.|. -..+.-|.+.+++||+++...
T Consensus 10 n~~~Ni~n~g~~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~----~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~ 85 (302)
T 3s25_A 10 NTAGNLYNAGLFCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLS----NDTAMYINADKNYVYYVRNNNQKITSQTFFSY 85 (302)
T ss_dssp SCTTTGGGTTCEEEETTEEEEEEGGGTTEEEEEETTSCSCEEEE----EEEEEEEEECSSEEEEEEECC------CCSSC
T ss_pred ccccceecceEEEEeCCEEEEEeCCCCceEEEEcCCCCCCEEcc----CCceeeEEEcCCEEEEEECCCCcccccceecc
Confidence 3344445555556678999999864 688999999999 88885 224677888999999997653
Q ss_pred --CceEEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe
Q psy5792 79 --GNIRSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV 156 (377)
Q Consensus 79 --~~I~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~ 156 (377)
+.|++++.+|...+.+...... .+ .+. ...|++++
T Consensus 86 n~~~Iy~i~~dg~~~~~l~~~~~~-~~---s~~---------------------------------------g~~Iy~~~ 122 (302)
T 3s25_A 86 DRNSLCRIKRNGHGSTVLDPDPCI-YA---SLI---------------------------------------GNYIYYLH 122 (302)
T ss_dssp CSEEEEEEETTSCCCEEEECSCEE-EE---EEE---------------------------------------TTEEEEEE
T ss_pred CCCeEEEEeCCCCcceEeecCCcc-EE---EEe---------------------------------------CCEEEEEe
Confidence 5799999888887766543221 11 111 13688877
Q ss_pred ---CCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCC
Q psy5792 157 ---NSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTP 233 (377)
Q Consensus 157 ---~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~ 233 (377)
.....|.++++++... +.+.. ... .++++.++.|||++.....|++++++|+.++.+.. .
T Consensus 123 ~~~~~~~~Iy~~~~dGs~~---~~lt~-~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-------~- 185 (302)
T 3s25_A 123 YDTQTATSLYRIRIDGEEK---KKIKN-HYL-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-------C- 185 (302)
T ss_dssp ESSSSCEEEEEEETTSCCC---EEEES-SCC-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-------S-
T ss_pred ecCCCCceEEEEECCCCCe---EEEeC-CCc-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-------C-
Confidence 3445699999999866 23322 111 34566799999999877899999999988777754 2
Q ss_pred CCCcceEEEeccCCeEEEEcCCC-CEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC
Q psy5792 234 VDQFTDIAVDWIAQNIYWSDPKE-NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK 312 (377)
Q Consensus 234 ~~~p~~iavD~~~~~lYwtd~~~-~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~ 312 (377)
+..++++|.++.|||++... .+|++++++|..+++|.+..+ | .++|.+++|||++.+....|+++++||++
T Consensus 186 ---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 186 ---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp ---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred ---CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 33456667899999998764 599999999999888876543 3 37778999999865446899999999999
Q ss_pred eEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 313 QTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 313 ~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
++.|.... ..+|++ .+++|||+|. ..+.|.+++++|+++.+++
T Consensus 258 r~~l~~~~---~~~i~i--~~d~Iy~td~-~~~~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 258 FKELAKGE---FCNINV--TSQYVYFTDF-VSNKEYCTSTQNPDTIKAL 300 (302)
T ss_dssp CEEEEESC---EEEEEE--CSSEEEEEET-TTCCEEEEESSSCCSCEEC
T ss_pred cEEeeCCc---cceEEE--eCCEEEEEEC-CCCeEEEEECCCCCceEec
Confidence 99988752 334554 8999999999 8889999999999887774
No 22
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=5.7e-23 Score=201.29 Aligned_cols=244 Identities=13% Similarity=0.147 Sum_probs=183.8
Q ss_pred CCcCCccccccC-CCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceE----EEc
Q psy5792 14 SFGAVASTLKPQ-SGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIR----SIN 85 (377)
Q Consensus 14 ~~~~~~~~~~d~-~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~----~~~ 85 (377)
.|..|.++++|+ ..++||++|.. ++|.++++++. ++++. .....|.+|++ .+++||++|...+.+. .++
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~--~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVY--SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEE--CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEe--cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 478999999998 57899999998 99999999998 77776 67889999999 3456999998654321 121
Q ss_pred CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 86 LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 86 ~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
.+|... . ..
T Consensus 212 ~~g~~~-------------------------------------------------------------------~--~~-- 220 (430)
T 3tc9_A 212 RESGFK-------------------------------------------------------------------V--IT-- 220 (430)
T ss_dssp GGGTSC-------------------------------------------------------------------S--EE--
T ss_pred CCCcee-------------------------------------------------------------------e--ee--
Confidence 111000 0 00
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
. +..+..|.++++|+.+++|||+|...++|+++++++.....+... .....|.+||+|+.
T Consensus 221 -----------~---l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~------~~~~~P~gia~~pd 280 (430)
T 3tc9_A 221 -----------E---LTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI------QDSGWEFHIQFHPS 280 (430)
T ss_dssp -----------E---EEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC------SSSSCCEEEEECTT
T ss_pred -----------e---eccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc------CCCCcceeEEEcCC
Confidence 0 012346888999998899999999999999999997654344430 23457999999987
Q ss_pred CCeEEEEcCCCCEEEEEEcCCCe-----EEEEeeC--------------CCCCce-eEEEcC-------CCCeEEEEecC
Q psy5792 246 AQNIYWSDPKENVIEVARLTGQY-----RYVLISG--------------GVDQPS-ALAVDP-------ESGYLFWSESG 298 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~~g~~-----~~~l~~~--------------~~~~P~-~iavdp-------~~g~lywtd~g 298 (377)
++.|||+|...++|.++++++.. ..++... .+..|. ++++++ ..|.|||+|++
T Consensus 281 G~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~ 360 (430)
T 3tc9_A 281 GNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE 360 (430)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred CCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence 66799999999999999998741 2233321 267899 899963 36899999996
Q ss_pred CCCeEEEEecCCCCeEEEEe---------c-------CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 299 KIPLIARAGLDGKKQTILAQ---------E-------IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 299 ~~~~I~r~~ldG~~~~~l~~---------~-------~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
+++|.+++.+|.-.+..-. . .|.+|.||++|+.++.||++|. .+++|.+++++
T Consensus 361 -n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~-~n~rIr~i~~e 429 (430)
T 3tc9_A 361 -NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR-ENRRIRKIGYE 429 (430)
T ss_dssp -GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG-GGTEEEEEEEC
T ss_pred -CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC-CCCeEEEEccC
Confidence 7999999988743333322 0 1668999999987899999999 99999999875
No 23
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.91 E-value=3.8e-22 Score=195.49 Aligned_cols=246 Identities=15% Similarity=0.176 Sum_probs=179.1
Q ss_pred CCcCCccccccCC--CCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCC
Q psy5792 14 SFGAVASTLKPQS--GPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGS 89 (377)
Q Consensus 14 ~~~~~~~~~~d~~--~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~ 89 (377)
.|..|.++++|++ .++|||+|.. ++|+++++++. .+++. ..+..|.+|++ .++.||++|..++...
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~--~~~~~P~giavd~dG~lyVad~~~~~~~------- 206 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT--TNIGQCADVNFTLNGDMVVVDDQSSDTN------- 206 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC--CCCSCEEEEEECTTCCEEEEECCSCTTS-------
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee--cCCCCccEEEECCCCCEEEEcCCCCccc-------
Confidence 5788999999984 7899999998 99999999666 76675 67889999999 5556999997542110
Q ss_pred ceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCC
Q psy5792 90 NSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNK 169 (377)
Q Consensus 90 ~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~ 169 (377)
.++..+.+... + ..
T Consensus 207 -----------~gv~~~~~~~~---------------------------------------~----------~~------ 220 (433)
T 4hw6_A 207 -----------TGIYLFTRASG---------------------------------------F----------TE------ 220 (433)
T ss_dssp -----------EEEEEECGGGT---------------------------------------T----------CC------
T ss_pred -----------ceEEEEECCCC---------------------------------------e----------ec------
Confidence 00000011000 0 00
Q ss_pred CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC-CCCcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 170 NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD-GTGRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~-G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
... +..+..|.++++|+.++.|||+|...++|++++++ |...+.+... .....+.+||+|+.++.
T Consensus 221 ------~~~--~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~------~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 221 ------RLS--LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM------DTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp ------EEE--EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC------SCCSSCEEEEECTTSSE
T ss_pred ------ccc--ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc------CCCCCcccEEEeCCCCE
Confidence 000 11245688899999889999999999999999998 4332344431 22344678999987777
Q ss_pred EEEEcCCCCEEEEEEcCCCe-----EEEEeeC--------------CCCCceeEEE---------cCCCCeEEEEecCCC
Q psy5792 249 IYWSDPKENVIEVARLTGQY-----RYVLISG--------------GVDQPSALAV---------DPESGYLFWSESGKI 300 (377)
Q Consensus 249 lYwtd~~~~~I~~~~~~g~~-----~~~l~~~--------------~~~~P~~iav---------dp~~g~lywtd~g~~ 300 (377)
||++|..+++|.++++++.. ..++... .+..|.+|++ | ..|.||++|++ +
T Consensus 287 LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~-n 364 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRD-S 364 (433)
T ss_dssp EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETT-T
T ss_pred EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECC-C
Confidence 99999999999999988531 1233321 2678999999 6 58999999986 7
Q ss_pred CeEEEEecCCCCeEEEEec-----------------CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 301 PLIARAGLDGKKQTILAQE-----------------IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 301 ~~I~r~~ldG~~~~~l~~~-----------------~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
++|.+++.+|.- .++... .|.+|.||++|+.++.||++|. .+++|.+++++
T Consensus 365 ~~I~~~~~~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~-~n~rIr~i~~e 432 (433)
T 4hw6_A 365 HTVRVLTPEGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC-DNHRVRKIAPE 432 (433)
T ss_dssp TEEEEECTTSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG-GGTEEEEEEEC
T ss_pred CEEEEECCCCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC-CCCEEEEEecC
Confidence 999999988843 333321 2678999999988999999999 99999999865
No 24
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.90 E-value=4.1e-21 Score=186.89 Aligned_cols=246 Identities=12% Similarity=0.113 Sum_probs=179.0
Q ss_pred CCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCC-ceEEEcCCCC
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDG-NIRSINLDGS 89 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~-~I~~~~~~g~ 89 (377)
.|..|.++++|+. ++|||+|...+.|+++++++. .+++. .....|. +++ .++.|||+|...+ .|++++.++.
T Consensus 129 ~~~~P~~la~d~~-g~lyv~d~~~~~I~~id~~~g~~~~~~--~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 129 KFKYMWGIAAVGN-NTVLAYQRDDPRVRLISVDDNKVTTVH--PGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCCCEEEEEECST-TEEEEEETTTTEEEEEETTTTEEEEEE--ETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred ccCCceEEEEeCC-CCEEEEecCCCcEEEEECCCCEEEEee--ccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 4789999999964 679999999999999999988 77775 3455677 888 5668999998654 7777773321
Q ss_pred c-eEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 90 N-STVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 90 ~-~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
. ...+. .+
T Consensus 205 ~~~~~~g----------------------------------------------------------------------~~- 213 (409)
T 3hrp_A 205 WAPTRIG----------------------------------------------------------------------QL- 213 (409)
T ss_dssp TCEEEEE----------------------------------------------------------------------EC-
T ss_pred ceeEEee----------------------------------------------------------------------ec-
Confidence 1 11110 00
Q ss_pred CCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcc-eEEEeccCC
Q psy5792 169 KNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFT-DIAVDWIAQ 247 (377)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~-~iavD~~~~ 247 (377)
.......|.++++|+.++.||+++. .++|+++++++.....+.. ..... .....|. +|++|+..+
T Consensus 214 -----------~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~-~~~~g-~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 214 -----------GSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQ-LELSG-SLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp -----------CTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEE-CCCCS-CCCCSSCCEEEEETTTT
T ss_pred -----------cchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEec-ccccC-CCCCCccccEEEeCCCC
Confidence 0012235677888888899999875 6799999998765443321 00000 1112366 999998789
Q ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEeeCC--------------CCCceeEEEcCCCCeEEEEec-CCCCeEEEEecCCCC
Q psy5792 248 NIYWSDPKENVIEVARLTGQYRYVLISGG--------------VDQPSALAVDPESGYLFWSES-GKIPLIARAGLDGKK 312 (377)
Q Consensus 248 ~lYwtd~~~~~I~~~~~~g~~~~~l~~~~--------------~~~P~~iavdp~~g~lywtd~-g~~~~I~r~~ldG~~ 312 (377)
+||++|...++|.+++++|... ++.... +..|.+|++|| .|.||++|. + +.+|.+.++....
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~~~-~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~-~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGECE-WFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFK-GYCLRKLDILDGY 356 (409)
T ss_dssp EEEEEETTTTEEEEECTTCCEE-EEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTT-TCEEEEEETTTTE
T ss_pred EEEEEeCCCCEEEEEecCCCEE-EEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCC-CCEEEEEECCCCE
Confidence 9999999999999999999843 343322 67899999998 577999998 6 7999999944333
Q ss_pred eEEEEec--------------CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 313 QTILAQE--------------IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 313 ~~~l~~~--------------~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
..++... .+..|.||++|.. +.||++|. ..++|.++.++
T Consensus 357 v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~-~n~~Ir~i~~e 409 (409)
T 3hrp_A 357 VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEA-WGKAIRKYAVE 409 (409)
T ss_dssp EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEES-TTCEEEEEEEC
T ss_pred EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEEC-CCCeEEEEEeC
Confidence 4444432 2678999999975 99999999 99999998763
No 25
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.90 E-value=9.9e-22 Score=183.28 Aligned_cols=226 Identities=16% Similarity=0.272 Sum_probs=169.9
Q ss_pred EEEECCeEEEEcCC-CCceEEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCc
Q psy5792 64 AVFYKGRIIYSDAN-DGNIRSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKV 142 (377)
Q Consensus 64 lav~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~ 142 (377)
++..+++||+++.. ...|++++.+|..++.+.... +..|.+ +
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~-~~~i~~---~--------------------------------- 63 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT-AMYINA---D--------------------------------- 63 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE-EEEEEE---C---------------------------------
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc-eeeEEE---c---------------------------------
Confidence 34599999999754 578999999998877765421 222221 1
Q ss_pred CCCcCCCcEEEEEeCC-------------CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEE---cCC
Q psy5792 143 DFHAGISDFILFSVNS-------------GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVD---IDH 206 (377)
Q Consensus 143 ~~C~~~~~~l~~s~~~-------------~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd---~~~ 206 (377)
...|+++..+ .+.|+++++++... ..+. .... ..++. .+++|||++ ...
T Consensus 64 ------g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~---~~l~--~~~~--~~~s~--~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 64 ------KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS---TVLD--PDPC--IYASL--IGNYIYYLHYDTQTA 128 (302)
T ss_dssp ------SSEEEEEEECC------CCSSCCSEEEEEEETTSCCC---EEEE--CSCE--EEEEE--ETTEEEEEEESSSSC
T ss_pred ------CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc---eEee--cCCc--cEEEE--eCCEEEEEeecCCCC
Confidence 1245555422 34699999999866 2222 1111 23333 499999999 466
Q ss_pred CcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEc
Q psy5792 207 GTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVD 286 (377)
Q Consensus 207 ~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavd 286 (377)
..|++++++|+.++.+.. ... +++||.+++|||++....+|++++++|..++.|... +..++++
T Consensus 129 ~~Iy~~~~dGs~~~~lt~-------~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~ 192 (302)
T 3s25_A 129 TSLYRIRIDGEEKKKIKN-------HYL-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC----NCYKPVV 192 (302)
T ss_dssp EEEEEEETTSCCCEEEES-------SCC-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS----CEEEEEE
T ss_pred ceEEEEECCCCCeEEEeC-------CCc-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC----Cccceee
Confidence 799999999999888876 322 467899999999999888999999999998877653 4455677
Q ss_pred CCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEE-EeCCCCeEEEEEccCCceEEEEec
Q psy5792 287 PESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWC-YSVGSNVLESMDYSGGSKMQLKLS 363 (377)
Q Consensus 287 p~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~-d~~~~~~i~~~~~~G~~~~~~~~~ 363 (377)
|..++|||++++...+|+|+++||+++++|..+.+ | .+|+.+++|||+ +. ....|++++++|++++++..+
T Consensus 193 P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~~~-~~~~i~~~~~DG~~r~~l~~~ 264 (302)
T 3s25_A 193 LDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQRGG-DNPALCVVKNDGTGFKELAKG 264 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEECS-SSCEEEEEETTSCCCEEEEES
T ss_pred ecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEECC-CCcEEEEEECCCCccEEeeCC
Confidence 89999999998756899999999999998876543 3 366678999998 55 678999999999998888754
No 26
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.6e-20 Score=184.92 Aligned_cols=252 Identities=11% Similarity=0.164 Sum_probs=185.5
Q ss_pred CCcCCccccccCC-CCeEEEEeCCCCcEEEEEcCCc-EEEEEeCC--CCCceEEEEE---------ECCeEEEEcCCCCc
Q psy5792 14 SFGAVASTLKPQS-GPFVYGVKTLSHSLHYVNIEVK-VAKVVSMP--DAAQVVAAVF---------YKGRIIYSDANDGN 80 (377)
Q Consensus 14 ~~~~~~~~~~d~~-~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~--~~~~p~~lav---------~~~~ly~td~~~~~ 80 (377)
.|..|.+|++|+. .++||+++...+.|+++|+++. ++++.... .+..|.+|++ .+++||++|+..++
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 4678999999984 7899999998899999999998 88876322 3457999999 45579999987643
Q ss_pred ------eEEEcC--CCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEE
Q psy5792 81 ------IRSINL--DGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFI 152 (377)
Q Consensus 81 ------I~~~~~--~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l 152 (377)
|..++. +|+..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~------------------------------------------------------------- 235 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFD------------------------------------------------------------- 235 (496)
T ss_dssp GGGEEEEEEEECCTTSCCS-------------------------------------------------------------
T ss_pred cccCceEEEEecCCCCcee-------------------------------------------------------------
Confidence 333320 01000
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC-------CCCc------
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD-------GTGR------ 219 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~-------G~~~------ 219 (377)
.+.. .. .++ ...+|.++++|+.++.||++|...++|++++++ +...
T Consensus 236 ---~~~~--~~--------------~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 236 ---DRSD--IQ--------------LIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp ---TTSC--EE--------------EEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred ---eccc--ce--------------eec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 0000 00 011 234678889999899999999999999999997 3221
Q ss_pred ------EEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE-----EEEeeC-------------
Q psy5792 220 ------ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR-----YVLISG------------- 275 (377)
Q Consensus 220 ------~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~-----~~l~~~------------- 275 (377)
+.+... .....|.+||+|+.++.||++|..+++|+++++++... .++...
T Consensus 295 ~~~g~~~~l~~~------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~ 368 (496)
T 3kya_A 295 NNPNTFKQLFTI------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTE 368 (496)
T ss_dssp GCTTTEEEEEEC------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGG
T ss_pred ccccccceeEec------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccc
Confidence 233330 23456999999987767999999999999999988531 233321
Q ss_pred -CCCCce-eEEEcC------CCCeEEEEecCCCCeEEEEecCCCCeEEEEec-----------------------CCCCc
Q psy5792 276 -GVDQPS-ALAVDP------ESGYLFWSESGKIPLIARAGLDGKKQTILAQE-----------------------IIMPI 324 (377)
Q Consensus 276 -~~~~P~-~iavdp------~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~-----------------------~~~~P 324 (377)
.+..|. ++++|. ..|.||++|++ +++|++++.+|. .+++... .|.+|
T Consensus 369 a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~-N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P 446 (496)
T 3kya_A 369 ARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL-NFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDV 446 (496)
T ss_dssp CBCSSEEEEEEEECTTCCSSCCEEEEEEEGG-GTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSE
T ss_pred cccCCCeEEEEEccccccccCCCeEEEEECC-CCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCC
Confidence 257899 889973 57999999996 899999998884 4444421 26789
Q ss_pred eEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 325 KDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 325 ~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
.||++|..++.||++|. .+++|++++++|..
T Consensus 447 ~gIavd~~~g~lyVaD~-~N~rIrki~~~~~~ 477 (496)
T 3kya_A 447 SGLVYDDVKEMFYVHDQ-VGHTIRTISMEQEE 477 (496)
T ss_dssp EEEEEETTTTEEEEEET-TTTEEEEEEECCCC
T ss_pred cEEEEECCCCEEEEEeC-CCCEEEEEECCCCc
Confidence 99999977799999999 99999999999753
No 27
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.87 E-value=1.1e-18 Score=160.17 Aligned_cols=277 Identities=14% Similarity=0.139 Sum_probs=202.6
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCcEEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEE
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVKVAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTV 93 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~ 93 (377)
+..|.++++|.+ ++||+++...+.|.+++.+|....+........|.+|++ .++.||+++...+.|.+++.+|+....
T Consensus 19 ~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 19 DSGPYGITSSED-GKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp TCCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCcceeeECCC-CCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEe
Confidence 679999999986 689999998999999999966333432234578999999 567899999888999999966665433
Q ss_pred Eec-CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 94 LRN-NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 94 ~~~-~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
... ... |.++++. ++ ..++++....+.|.+++.++.
T Consensus 98 ~~~~~~~~~~~i~~~-~~----------------------------------------g~l~v~~~~~~~i~~~~~~g~- 135 (300)
T 2qc5_A 98 PLPQPDSGPYGITEG-LN----------------------------------------GDIWFTQLNGDRIGKLTADGT- 135 (300)
T ss_dssp ECSSTTCCEEEEEEC-ST----------------------------------------TCEEEEETTTTEEEEECTTSC-
T ss_pred cCCCCCCCCccceEC-CC----------------------------------------CCEEEEccCCCeEEEECCCCC-
Confidence 222 122 7777653 21 136777754456888887733
Q ss_pred ceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 172 SKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 172 ~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
. . ...+. ....|.++++|.. ++||+++...+.|++++.+|........ .....|.+|++|. .++||
T Consensus 136 ~---~-~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~-------~~~~~~~~i~~d~-~g~l~ 202 (300)
T 2qc5_A 136 I---Y-EYDLPNKGSYPAFITLGSD-NALWFTENQNNSIGRITNTGKLEEYPLP-------TNAAAPVGITSGN-DGALW 202 (300)
T ss_dssp E---E-EEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCEEEEECS-------STTCCEEEEEECT-TSSEE
T ss_pred E---E-EccCCCCCCCceeEEECCC-CCEEEEecCCCeEEEECCCCcEEEeeCC-------CCCCCcceEEECC-CCCEE
Confidence 2 1 12222 4567999999984 5699999888899999997654332121 3456799999996 67999
Q ss_pred EEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEe
Q psy5792 251 WSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLD 330 (377)
Q Consensus 251 wtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD 330 (377)
+++...++|.+.+++|.............|.+|++|+ .|.||+++.+ ..+|.+.+.+|.............|.+|++|
T Consensus 203 v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~ 280 (300)
T 2qc5_A 203 FVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGK-NSEIWFTEWG-ANQIGRITNDNTIQEYQLQTENAEPHGITFG 280 (300)
T ss_dssp EEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECS-TTCEEEEETT-TTEEEEECTTSCEEEEECCSTTCCCCCEEEC
T ss_pred EEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECC-CCCEEEeccC-CCeEEEECCCCcEEEEECCccCCccceeEeC
Confidence 9999889999999988766544444577899999998 5889999975 6899999987654433233335789999999
Q ss_pred CCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 331 RKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 331 ~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
. .++||+++. . .|.+++.+
T Consensus 281 ~-~g~l~v~~~-~--~i~~~~p~ 299 (300)
T 2qc5_A 281 K-DGSVWFALK-C--KIGKLNLN 299 (300)
T ss_dssp T-TSCEEEECS-S--EEEEEEEC
T ss_pred C-CCCEEEEcc-C--ceEEeCCC
Confidence 5 578999887 4 88887653
No 28
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=7.2e-19 Score=165.59 Aligned_cols=266 Identities=9% Similarity=0.018 Sum_probs=191.4
Q ss_pred ecccc-CCCCcCCccccccCCCCeEEEEeCCC------------------------CcEEEEEcC-Cc-EEEEEeCCCCC
Q psy5792 7 LPYTR-NPSFGAVASTLKPQSGPFVYGVKTLS------------------------HSLHYVNIE-VK-VAKVVSMPDAA 59 (377)
Q Consensus 7 ~~~~~-~~~~~~~~~~~~d~~~~~ly~~d~~~------------------------~~I~~~~~d-G~-~~~i~~~~~~~ 59 (377)
.+|+. +.-++.|.|+++|++ ++||+++... +.|.++|.+ |+ .+.+ ....+.
T Consensus 14 ~~wp~~~~~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~ 91 (329)
T 3fvz_A 14 LDWPGVYLLPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS-GKNLFY 91 (329)
T ss_dssp TTCGGGGCCCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE-CTTTCS
T ss_pred cCCchhceecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc-CCCccC
Confidence 46744 445889999999986 5899999877 479999997 66 5444 234567
Q ss_pred ceEEEEE-ECCeEEEEcCCCCceEEEcCCCCc--eEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCc
Q psy5792 60 QVVAAVF-YKGRIIYSDANDGNIRSINLDGSN--STVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKV 136 (377)
Q Consensus 60 ~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~--~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~ 136 (377)
.|.+|++ .++.||++|..+++|.+++.+|+. ...+.... .
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~------------~------------------------- 134 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM------------Q------------------------- 134 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT------------B-------------------------
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC------------C-------------------------
Confidence 8999999 577899999999999999977752 22221100 0
Q ss_pred cccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEc-CCCcEEEEEcC
Q psy5792 137 SLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI-DHGTISRTHRD 215 (377)
Q Consensus 137 ~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~-~~~~I~~~~~~ 215 (377)
.+.. ...+..|.++++|+.++.||++|. ..++|.+++.+
T Consensus 135 -------------------------------~g~~---------~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~ 174 (329)
T 3fvz_A 135 -------------------------------PGSD---------QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS 174 (329)
T ss_dssp -------------------------------CCCS---------TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT
T ss_pred -------------------------------CCCC---------ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC
Confidence 0000 013456899999987899999996 78999999998
Q ss_pred CCCcEEEEecccc--CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC-CCeEEEEeeC-CCCCceeEEEcCCCCe
Q psy5792 216 GTGRENIIEYVET--GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT-GQYRYVLISG-GVDQPSALAVDPESGY 291 (377)
Q Consensus 216 G~~~~~i~~~~~~--~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~-g~~~~~l~~~-~~~~P~~iavdp~~g~ 291 (377)
|.....+...... ..+..+..|.+||+|+.+++||++|..+++|.+.+++ |+....+... ....|.++++.| +.
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~ 252 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP--GF 252 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET--TE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC--CE
Confidence 8665544321000 0012345699999998779999999999999999998 8877666432 245688888887 67
Q ss_pred EEEEecC------CCCeEEEEecCCCCeEEEEe---cCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 292 LFWSESG------KIPLIARAGLDGKKQTILAQ---EIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 292 lywtd~g------~~~~I~r~~ldG~~~~~l~~---~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
+|.++.. ...+|...++........+. ..+..|.+|++|+ ++.||++|. ..++|.+++++|.
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~-~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-DGTVYIGDA-HTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-TSEEEEEES-SSCCEEEEEEEEC
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-CCCEEEEEC-CCCEEEEEeCCcc
Confidence 7766521 24588888865433333332 3478899999996 459999999 9999999998864
No 29
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.85 E-value=1.3e-19 Score=164.57 Aligned_cols=238 Identities=15% Similarity=0.214 Sum_probs=177.0
Q ss_pred CCccccccCCCCeEEE-EeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE-CCeEEEEcCCCCceEEEcCCCCceEE
Q psy5792 17 AVASTLKPQSGPFVYG-VKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY-KGRIIYSDANDGNIRSINLDGSNSTV 93 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~-~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~g~~~~~ 93 (377)
.|.++++|+.+ +||+ ++...+.|.+++.++. ...+ .......|.+|++. ++.||+++. .+.|.+++.++.....
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVL-PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EEC-CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceE-eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee
Confidence 99999999865 6999 8888999999998777 4443 22455789999994 678999998 7788888755432111
Q ss_pred EecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCce
Q psy5792 94 LRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESK 173 (377)
Q Consensus 94 ~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~ 173 (377)
+
T Consensus 102 ~------------------------------------------------------------------------------- 102 (270)
T 1rwi_B 102 L------------------------------------------------------------------------------- 102 (270)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred eeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEc
Q psy5792 174 VTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd 253 (377)
.......|.++++|+ +++||+++...+.|++++.. +....... ...+..|.+|++|+ .++||+++
T Consensus 103 ------~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-~~~~~~~~------~~~~~~p~~i~~~~-~g~l~v~~ 167 (270)
T 1rwi_B 103 ------PFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAG-SKTQTVLP------FTGLNDPDGVAVDN-SGNVYVTD 167 (270)
T ss_dssp ------CCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTT-CCSCEECC------CCSCCSCCCEEECT-TCCEEEEE
T ss_pred ------ecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECC-CceeEeec------cccCCCceeEEEeC-CCCEEEEE
Confidence 001223577888887 56799999888899999544 33333221 03456799999996 56799999
Q ss_pred CCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCC
Q psy5792 254 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKN 333 (377)
Q Consensus 254 ~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~ 333 (377)
...++|.+.++++..........+..|.+|++|+ .|.||+++.+ ..+|.+.+.++.....+....+..|.++++|..
T Consensus 168 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~-~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~- 244 (270)
T 1rwi_B 168 TDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHN-TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD- 244 (270)
T ss_dssp GGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETT-TSCEEEECTTCSCCEECCCCSCSCEEEEEECTT-
T ss_pred CCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECC-CCcEEEEcCCCCcceeeccCCCCCceeEEECCC-
Confidence 9889999999998776544444568899999998 5799999975 689999999887665544334678999999964
Q ss_pred CEEEEEEeCCCCeEEEEEccCC
Q psy5792 334 KRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 334 ~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
++||+++. ..++|..++++..
T Consensus 245 g~l~v~~~-~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 245 RTVYVADR-GNDRVVKLTSLEH 265 (270)
T ss_dssp CCEEEEEG-GGTEEEEECCCGG
T ss_pred CCEEEEEC-CCCEEEEEcCCCc
Confidence 67999999 9999999988743
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=3.1e-17 Score=150.36 Aligned_cols=280 Identities=14% Similarity=0.134 Sum_probs=199.1
Q ss_pred CCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCcEEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceE
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVKVAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNST 92 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~ 92 (377)
....|.++++|++ ++||+++...+.|.+++++|....+........|.+|++ .++.+|+++...+.|.+++.+|+...
T Consensus 13 ~~~~~~~i~~d~~-g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~ 91 (299)
T 2z2n_A 13 QDTGPYGITVSDK-GKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKE 91 (299)
T ss_dssp SSCCEEEEEECTT-SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred cCCCccceEECCC-CCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEE
Confidence 4578999999976 579999988899999999965444431234578999999 67799999988889999996665433
Q ss_pred EEec-CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 93 VLRN-NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 93 ~~~~-~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
.... ... |.++++. ++ ..++++....+.|.+++.++.
T Consensus 92 ~~~~~~~~~~~~i~~~-~~----------------------------------------g~l~v~~~~~~~i~~~d~~g~ 130 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEG-PN----------------------------------------GDIWFTEMNGNRIGRITDDGK 130 (299)
T ss_dssp EECSSTTCCEEEEEEC-TT----------------------------------------SCEEEEETTTTEEEEECTTCC
T ss_pred EeCCCcCCCceeeEEC-CC----------------------------------------CCEEEEecCCceEEEECCCCC
Confidence 2211 222 6776652 21 236777654445888877433
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
. ...........+.++++|. ++.+|+++...+.|++++.+|........ .....|.+|++|. .++||
T Consensus 131 -~---~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~-------~~~~~~~~i~~~~-~g~l~ 197 (299)
T 2z2n_A 131 -I---REYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITESGDITEFKIP-------TPASGPVGITKGN-DDALW 197 (299)
T ss_dssp -E---EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECS-------STTCCEEEEEECT-TSSEE
T ss_pred -E---EEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcCCCcEEEeeCC-------CCCCcceeEEECC-CCCEE
Confidence 1 1121122456799999997 56899999888899999985533222122 3456799999996 57899
Q ss_pred EEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEe
Q psy5792 251 WSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLD 330 (377)
Q Consensus 251 wtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD 330 (377)
+++...+.|.+.+++|.............|.+|++|+ +|.||+++.+ ...|.+.+.+|.............|.++++
T Consensus 198 v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~- 274 (299)
T 2z2n_A 198 FVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGA-GIDLWFTEWG-ANKIGRLTSNNIIEEYPIQIKSAEPHGICF- 274 (299)
T ss_dssp EEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECS-TTCEEEEETT-TTEEEEEETTTEEEEEECSSSSCCEEEEEE-
T ss_pred EEccCCceEEEECCCCcEEEEECCCCCCCceeEEECC-CCCEEEeccC-CceEEEECCCCceEEEeCCCCCCccceEEe-
Confidence 9998889999999977655433333567899999997 5889999974 689999998764322212233578999999
Q ss_pred CCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 331 RKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 331 ~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
.+++||+++. .+.|.+++.+.
T Consensus 275 -~~g~l~v~~~--~~~l~~~~~~~ 295 (299)
T 2z2n_A 275 -DGETIWFAME--CDKIGKLTLIK 295 (299)
T ss_dssp -CSSCEEEEET--TTEEEEEEEC-
T ss_pred -cCCCEEEEec--CCcEEEEEcCc
Confidence 6789999986 47888887763
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=6.6e-17 Score=148.25 Aligned_cols=242 Identities=14% Similarity=0.103 Sum_probs=180.7
Q ss_pred CCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEe----CCCCCceEEEEE--ECCeEEEEcCC-CCceEEEc
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVS----MPDAAQVVAAVF--YKGRIIYSDAN-DGNIRSIN 85 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~----~~~~~~p~~lav--~~~~ly~td~~-~~~I~~~~ 85 (377)
.+..|.++++|+. ++||+++...+.|.+++++|. .+.+.. ......|.+|++ .+++||+++.. ++.|.+++
T Consensus 28 ~~~~p~~v~~~~~-g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQ-NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTT-CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCC-CCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 3679999999986 579999999999999999998 666531 123468999999 47899999864 66777776
Q ss_pred CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 86 LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 86 ~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
.+|+.... +
T Consensus 107 ~~g~~~~~-----------------------------------------------------------------------~ 115 (286)
T 1q7f_A 107 QYGQFVRK-----------------------------------------------------------------------F 115 (286)
T ss_dssp TTSCEEEE-----------------------------------------------------------------------E
T ss_pred CCCcEEEE-----------------------------------------------------------------------e
Confidence 54432211 1
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
.. .....|.++++|+ +++||+++...+.|++++.+|.....+.. ...+..|.+|++|+
T Consensus 116 ~~--------------~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~------~~~~~~p~~i~~~~- 173 (286)
T 1q7f_A 116 GA--------------TILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHKFGC------SKHLEFPNGVVVND- 173 (286)
T ss_dssp CT--------------TTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEEEC------TTTCSSEEEEEECS-
T ss_pred cC--------------ccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCEEEEeCC------CCccCCcEEEEECC-
Confidence 00 1123577888887 45799999888999999988755444432 02456799999996
Q ss_pred CCeEEEEcCCCCEEEEEEcCCCeEEEEeeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec-CCCC
Q psy5792 246 AQNIYWSDPKENVIEVARLTGQYRYVLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-IIMP 323 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~-~~~~ 323 (377)
.++||+++...++|.+.+++|.....+... .+..|.+|++|+ +|.||+++.+.+.+|.+.+.+|.....+... ....
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~ 252 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQ 252 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSC
T ss_pred CCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCc
Confidence 678999999889999999999876655432 257899999998 6899999976324999999888776666543 2346
Q ss_pred ceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 324 IKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 324 P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
|.++++++ +++||+++. .++|...++.
T Consensus 253 ~~~i~~~~-~g~l~vs~~--~~~v~v~~~~ 279 (286)
T 1q7f_A 253 CFDVALMD-DGSVVLASK--DYRLYIYRYV 279 (286)
T ss_dssp EEEEEEET-TTEEEEEET--TTEEEEEECS
T ss_pred ceeEEECC-CCcEEEECC--CCeEEEEEcc
Confidence 89999996 678999964 5788777665
No 32
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.78 E-value=1.5e-16 Score=149.17 Aligned_cols=247 Identities=10% Similarity=0.051 Sum_probs=174.4
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCC------------------CCCceEEEEEE--CCeEEE
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMP------------------DAAQVVAAVFY--KGRIIY 73 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~------------------~~~~p~~lav~--~~~ly~ 73 (377)
+..|.|+++|.. +.+||++...+.|.+++.++. .+.+.... ....|.||++. +++||+
T Consensus 18 ~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 18 SYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SSCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred cCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 578999999986 677889999999999999987 66553111 12469999996 689999
Q ss_pred EcCCCCceEEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEE
Q psy5792 74 SDANDGNIRSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFIL 153 (377)
Q Consensus 74 td~~~~~I~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~ 153 (377)
+|... .|.+++.++...+.+..
T Consensus 97 ~d~~~-~i~~~d~~~g~~~~~~~--------------------------------------------------------- 118 (322)
T 2fp8_A 97 VDCYY-HLSVVGSEGGHATQLAT--------------------------------------------------------- 118 (322)
T ss_dssp EETTT-EEEEECTTCEECEEEES---------------------------------------------------------
T ss_pred EECCC-CEEEEeCCCCEEEEecc---------------------------------------------------------
Confidence 99764 48878744322222110
Q ss_pred EEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC-----------------CCcEEEEEcCC
Q psy5792 154 FSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID-----------------HGTISRTHRDG 216 (377)
Q Consensus 154 ~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~-----------------~~~I~~~~~~G 216 (377)
. ..+ ..+..|.++++|..++.||++|.. .+.|++++.++
T Consensus 119 --------~----~~~------------~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 119 --------S----VDG------------VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp --------E----ETT------------EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred --------c----CCC------------CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 0 000 011246778888745689999864 26789998875
Q ss_pred CCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCC---eEEEEeeCCCCCceeEEEcCCCCeEE
Q psy5792 217 TGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQ---YRYVLISGGVDQPSALAVDPESGYLF 293 (377)
Q Consensus 217 ~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~---~~~~l~~~~~~~P~~iavdp~~g~ly 293 (377)
...+.+.. .+..|.+|++++.++.||++|...++|.++++++. ..+++.. +..|.+|++|+ +|.||
T Consensus 175 ~~~~~~~~--------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~gP~gi~~d~-~G~l~ 243 (322)
T 2fp8_A 175 KETTLLLK--------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPNPGNIKRNA-DGHFW 243 (322)
T ss_dssp TEEEEEEE--------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSSEEEEEECT-TSCEE
T ss_pred CEEEEecc--------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCCCCCeEECC-CCCEE
Confidence 44444443 56789999999876779999999999999999873 3334433 22299999997 68899
Q ss_pred EEecC---------CCCeEEEEecCCCCeEEEEecC---CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceE
Q psy5792 294 WSESG---------KIPLIARAGLDGKKQTILAQEI---IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKM 358 (377)
Q Consensus 294 wtd~g---------~~~~I~r~~ldG~~~~~l~~~~---~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~ 358 (377)
+++++ ...+|.+.+.+|.....+.... +..|.+++.+ .++||+++. ..+.|.+++++.....
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~-~~~~i~~~~~~~~~~~ 317 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTL-FHGSVGILVYDKKGNS 317 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECS-SCSEEEEEEC------
T ss_pred EEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEe--CCEEEEeec-CCCceEEEecccccCc
Confidence 99874 1367999998887666555432 5678888874 689999999 9999999998854433
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=5.1e-16 Score=146.15 Aligned_cols=275 Identities=12% Similarity=0.019 Sum_probs=194.8
Q ss_pred CeEEEEeCC-----CCcEEEEEcCCc-E-EEEEe----CCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEe
Q psy5792 28 PFVYGVKTL-----SHSLHYVNIEVK-V-AKVVS----MPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLR 95 (377)
Q Consensus 28 ~~ly~~d~~-----~~~I~~~~~dG~-~-~~i~~----~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~ 95 (377)
..+|+++.+ .+.|..+|++.. . ..+.. ......|.+|++.++++|++....+.|.++| .+++....+.
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC
Confidence 467888887 789999999866 3 32310 1223568999999999999999889999999 7788777665
Q ss_pred cCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceee
Q psy5792 96 NNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVT 175 (377)
Q Consensus 96 ~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~ 175 (377)
....|.++++...+ .+++++...+.|..+++..... .
T Consensus 82 ~~~~p~~i~~~~~g-----------------------------------------~lyv~~~~~~~v~~iD~~t~~~--~ 118 (328)
T 3dsm_A 82 GFTSPRYIHFLSDE-----------------------------------------KAYVTQIWDYRIFIINPKTYEI--T 118 (328)
T ss_dssp CCSSEEEEEEEETT-----------------------------------------EEEEEEBSCSEEEEEETTTTEE--E
T ss_pred CCCCCcEEEEeCCC-----------------------------------------eEEEEECCCCeEEEEECCCCeE--E
Confidence 43348888863221 3777773444699998876532 1
Q ss_pred EEEEecCC----CCceEEEEEECCCCEEEEEEcC-CCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 176 QVLGPLSK----VSLAAKVDFHAAEDYIYWVDID-HGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 176 ~~~~~~~~----~~~~~~l~~d~~~~~ly~sd~~-~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
...++.. ...|.+++++ +++||+++.. .+.|.++++........+. . -..|.++++|+ .+++|
T Consensus 119 -~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~-------~-g~~p~~i~~~~-dG~l~ 186 (328)
T 3dsm_A 119 -GYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELT-------I-GIQPTSLVMDK-YNKMW 186 (328)
T ss_dssp -EEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEE-------C-SSCBCCCEECT-TSEEE
T ss_pred -EEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEE-------c-CCCccceEEcC-CCCEE
Confidence 1223222 1268888885 8999999984 7899999987433222232 1 24699999996 57899
Q ss_pred EEcCCC----------CEEEEEEcCCCeEE-EEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeE--EEE
Q psy5792 251 WSDPKE----------NVIEVARLTGQYRY-VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQT--ILA 317 (377)
Q Consensus 251 wtd~~~----------~~I~~~~~~g~~~~-~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~--~l~ 317 (377)
++.... ++|.+.+++..... .+.......|++|+++|.+++||+++. .|++.+.+..... .++
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~ 262 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----DIWRMPVEADRVPVRPFL 262 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----SEEEEETTCSSCCSSCSB
T ss_pred EEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----EEEEEECCCCceeeeeee
Confidence 998765 79999999865433 332222357999999999999999973 8888888643321 111
Q ss_pred ecCCCCceEEEEeCCCCEEEEEE----eCCCCeEEEEEccCCceEEEEe
Q psy5792 318 QEIIMPIKDITLDRKNKRVYWCY----SVGSNVLESMDYSGGSKMQLKL 362 (377)
Q Consensus 318 ~~~~~~P~glalD~~~~~LYw~d----~~~~~~i~~~~~~G~~~~~~~~ 362 (377)
......|.|+++|+.+++||+++ . ..++|..++.+|.-.+++-.
T Consensus 263 ~~~~~~p~gi~vdp~~g~lyva~~~~y~-~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 263 EFRDTKYYGLTVNPNNGEVYVADAIDYQ-QQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEECTTSS-SEEEEEEECTTCCEEEEEEE
T ss_pred cCCCCceEEEEEcCCCCeEEEEcccccc-cCCEEEEECCCCCEEEEEEe
Confidence 21136899999998899999999 7 78999999999765555543
No 34
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.1e-16 Score=156.69 Aligned_cols=168 Identities=11% Similarity=0.111 Sum_probs=129.8
Q ss_pred CCCceEEEEEECCCCEEEEEEcCCC----cEEEEEcCCCCcE-EEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCC
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDIDHG----TISRTHRDGTGRE-NIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN 257 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~~~----~I~~~~~~G~~~~-~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~ 257 (377)
....|.++++|..+++||++|...+ .+..+..+|.... ..+. .+.+|.++++|+..++|||+|...+
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~--------~~~~p~giavdp~~g~lyv~d~~~~ 248 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT--------KGQNCNGAETHPINGELYFNSWNAG 248 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE--------ECSSCCCEEECTTTCCEEEEETTTT
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec--------cCCCceEEEEeCCCCEEEEEECCCC
Confidence 4567999999998888999997543 5667787776542 2222 4678999999988899999999999
Q ss_pred EEEEEEcCCCeEEEEeeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-----eEEEEec------------
Q psy5792 258 VIEVARLTGQYRYVLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-----QTILAQE------------ 319 (377)
Q Consensus 258 ~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-----~~~l~~~------------ 319 (377)
+|+++++++.....+... ....|++|++||...+|||+|.. +++|++++.+|.. .+++...
T Consensus 249 ~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~-~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~ 327 (430)
T 3tc9_A 249 QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN-QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGK 327 (430)
T ss_dssp EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGG
T ss_pred EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC-CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCc
Confidence 999999998876444432 34679999999977779999985 7999999998752 2333332
Q ss_pred --CCCCce-EEEEeC-------CCCEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 320 --IIMPIK-DITLDR-------KNKRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 320 --~~~~P~-glalD~-------~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
.+..|. |++++. .++.||++|. .+++|.+++.+| ...++.
T Consensus 328 ~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~-~n~~I~~i~~~G-~v~~~~ 377 (430)
T 3tc9_A 328 KARMHAPRQGTFVKNPAYKGSSDEYDFYFCDR-ENHCIRILTPQG-RVTTFA 377 (430)
T ss_dssp GCBBSSEEEEEEEECGGGTTSSCCEEEEEEEG-GGTEEEEECTTS-EEEEEE
T ss_pred ceEeCCCcceEEEccccccccCCCCeEEEEEC-CCcEEEEECCCC-cEEEEE
Confidence 267899 899963 4689999999 999999999876 344443
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.78 E-value=1.7e-15 Score=138.77 Aligned_cols=241 Identities=14% Similarity=0.133 Sum_probs=176.0
Q ss_pred CCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEEe-cCCC-ceeEEeeecCCCCcccCCCcCCCCCCceecccc
Q psy5792 56 PDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVLR-NNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGP 132 (377)
Q Consensus 56 ~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~~-~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~ 132 (377)
.....|.+|++ .++.||+++...+.|.+++.+|+...... .... |.++.+. ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~----------------------- 72 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVS-SL----------------------- 72 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEEC-TT-----------------------
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEEC-CC-----------------------
Confidence 45678999999 67899999988899999996555443222 1222 6676652 22
Q ss_pred CCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEE
Q psy5792 133 LSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISR 211 (377)
Q Consensus 133 ~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~ 211 (377)
..++++....+.|.+++.++. . ....+. ....|.++++|. ++.||+++...+.|++
T Consensus 73 -----------------g~l~v~~~~~~~v~~~d~~g~-~----~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~ 129 (300)
T 2qc5_A 73 -----------------GDIWFTENGANKIGKLSKKGG-F----TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGK 129 (300)
T ss_dssp -----------------SCEEEEETTTTEEEEECTTSC-E----EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEE
T ss_pred -----------------CCEEEEecCCCeEEEECCCCC-e----EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEE
Confidence 236777765556888887733 2 112222 346799999996 6789999988889999
Q ss_pred EEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCe
Q psy5792 212 THRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGY 291 (377)
Q Consensus 212 ~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ 291 (377)
++.+|...+.... .....|.+|++|. .++||+++...+.|.+.+.+|.............|.+|++|+ +|.
T Consensus 130 ~~~~g~~~~~~~~-------~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~ 200 (300)
T 2qc5_A 130 LTADGTIYEYDLP-------NKGSYPAFITLGS-DNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGA 200 (300)
T ss_dssp ECTTSCEEEEECS-------STTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSS
T ss_pred ECCCCCEEEccCC-------CCCCCceeEEECC-CCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCC
Confidence 9998543322222 2456799999996 567999999889999999988766543334567899999998 789
Q ss_pred EEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 292 LFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 292 lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
||+++.+ ..+|.+.+.+|.............|.+|++|.. ++||+++. ..+.|.+++.+|.
T Consensus 201 l~v~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~-~~~~i~~~~~~g~ 261 (300)
T 2qc5_A 201 LWFVEIM-GNKIGRITTTGEISEYDIPTPNARPHAITAGKN-SEIWFTEW-GANQIGRITNDNT 261 (300)
T ss_dssp EEEEETT-TTEEEEECTTCCEEEEECSSTTCCEEEEEECST-TCEEEEET-TTTEEEEECTTSC
T ss_pred EEEEccC-CCEEEEEcCCCcEEEEECCCCCCCceEEEECCC-CCEEEecc-CCCeEEEECCCCc
Confidence 9999975 578999998766444333334678999999964 77999998 8899999999753
No 36
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.77 E-value=4.8e-16 Score=144.86 Aligned_cols=227 Identities=14% Similarity=0.126 Sum_probs=161.8
Q ss_pred CCCCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCC--ceEEEc-C
Q psy5792 12 NPSFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDG--NIRSIN-L 86 (377)
Q Consensus 12 ~~~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~--~I~~~~-~ 86 (377)
.|....|.|+++|.. ++|||+|...++|.+++.+|+ .+.+ .....|.+|++ .+++||++|...+ .|.+++ .
T Consensus 28 ~p~~~~pegia~~~~-g~lyv~d~~~~~I~~~d~~g~~~~~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 28 FPVNTFLENLASAPD-GTIFVTNHEVGEIVSITPDGNQQIHA---TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp ECTTCCEEEEEECTT-SCEEEEETTTTEEEEECTTCCEEEEE---ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCCCCCcceEEECCC-CCEEEEeCCCCeEEEECCCCceEEEE---eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 344578999999985 679999999999999999999 5544 33468999999 5678999997654 488887 6
Q ss_pred CCCceEEEec-CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEE
Q psy5792 87 DGSNSTVLRN-NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMG 164 (377)
Q Consensus 87 ~g~~~~~~~~-~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~ 164 (377)
+|+...+... ... +.|+++. + ...+++++...+.|.+
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~-~----------------------------------------~~~~~v~d~~~g~i~~ 142 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPL-S----------------------------------------DTQYLTADSYRGAIWL 142 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEES-S----------------------------------------SSEEEEEETTTTEEEE
T ss_pred CCeEEEEEeCCCccccCccccc-C----------------------------------------CCcEEEEECCCCeEEE
Confidence 6765433321 111 4444431 1 1246667755567888
Q ss_pred EEcCCCCceeeEEE---------EecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC--C--CcEEEEeccccCCC
Q psy5792 165 IKYNKNESKVTQVL---------GPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG--T--GRENIIEYVETGDP 231 (377)
Q Consensus 165 ~~l~~~~~~~~~~~---------~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G--~--~~~~i~~~~~~~~~ 231 (377)
++.+.... ... .+...+..|.+++.| ++.||++|...++|+++++++ . ..+.+..
T Consensus 143 ~d~~~~~~---~v~~~~~~~~~~~~~~~~~~pngis~d--g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~------- 210 (306)
T 2p4o_A 143 IDVVQPSG---SIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE------- 210 (306)
T ss_dssp EETTTTEE---EEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-------
T ss_pred EeCCCCcE---eEEEECCccccccccCCCCcCCCcCcC--CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-------
Confidence 88764311 111 112345578888444 789999999999999999984 2 2333332
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEE-eeCCCCCceeEEEc---CCCCeEEEEecC
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVL-ISGGVDQPSALAVD---PESGYLFWSESG 298 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l-~~~~~~~P~~iavd---p~~g~lywtd~g 298 (377)
+..|.+|++|. .++||+++...++|.+++.+|+...+. +...+..|.+++++ |..+.||+++.+
T Consensus 211 --~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 211 --QTNIDDFAFDV-EGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp --SCCCSSEEEBT-TCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred --cCCCCCeEECC-CCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 35799999996 679999999999999999998764321 23346889999998 778999999864
No 37
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.76 E-value=2.3e-16 Score=154.44 Aligned_cols=166 Identities=14% Similarity=0.148 Sum_probs=124.0
Q ss_pred CCCceEEEEEECCCCEEEEEEcCC----CcEEEEEcCCCCcE-EEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCC
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDIDH----GTISRTHRDGTGRE-NIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN 257 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~~----~~I~~~~~~G~~~~-~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~ 257 (377)
....|.++++|+.++ ||++|... ..+..+..++.... ... ..+..|.++++|+..++|||+|..++
T Consensus 180 ~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~--------~~~~~P~giavd~~~G~lyv~d~~~~ 250 (433)
T 4hw6_A 180 NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSL--------CNARGAKTCAVHPQNGKIYYTRYHHA 250 (433)
T ss_dssp CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEE--------EECSSBCCCEECTTTCCEEECBTTCS
T ss_pred CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccc--------cccCCCCEEEEeCCCCeEEEEECCCC
Confidence 345689999998766 99999743 23555665554331 222 24678999999988999999999999
Q ss_pred EEEEEEcC-CCeEEEEee-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-----eEEEEec-----------
Q psy5792 258 VIEVARLT-GQYRYVLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-----QTILAQE----------- 319 (377)
Q Consensus 258 ~I~~~~~~-g~~~~~l~~-~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-----~~~l~~~----------- 319 (377)
+|++++++ |.....+.. .....|.+|++||..++|||+|.+ +++|.++++++.. ..++...
T Consensus 251 ~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~-~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~ 329 (433)
T 4hw6_A 251 MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG-KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMG 329 (433)
T ss_dssp EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT-TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEG
T ss_pred EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC-CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcc
Confidence 99999998 655344443 234456789999987789999986 7999999988532 2344332
Q ss_pred ---CCCCceEEEE---------eCCCCEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 320 ---IIMPIKDITL---------DRKNKRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 320 ---~~~~P~glal---------D~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
.+..|.||++ | .+++||++|. .+++|.+++.+| ...++.
T Consensus 330 ~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~-~n~~I~~~~~~G-~v~t~~ 380 (433)
T 4hw6_A 330 TGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDR-DSHTVRVLTPEG-RVTTYA 380 (433)
T ss_dssp GGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEET-TTTEEEEECTTS-EEEEEE
T ss_pred cceEEcCCccEEEEccccccccC-CCCcEEEEEC-CCCEEEEECCCC-CEEEEE
Confidence 2678999999 6 6799999999 999999999886 344443
No 38
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=8.5e-16 Score=144.62 Aligned_cols=253 Identities=11% Similarity=0.087 Sum_probs=182.8
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
...|.+++++ +++||++....+.|..+|++.. ..++ .....|.+|++ .+++||+++...+.|.++| .+++.
T Consensus 43 g~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i---~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 43 GDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI---TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp BSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE---ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE
T ss_pred CccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc---CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE
Confidence 3457888885 5799999999999999999855 5666 45689999999 8889999997788999999 56665
Q ss_pred eEEEecCC------CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeC-CCCeEE
Q psy5792 91 STVLRNNA------GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVN-SGYDIM 163 (377)
Q Consensus 91 ~~~~~~~~------~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~-~~~~I~ 163 (377)
...+.... .|.++++ .+ ..+++++. ..+.|.
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~--~~----------------------------------------~~lyv~~~~~~~~v~ 155 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ--YG----------------------------------------KYVYVNCWSYQNRIL 155 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE--ET----------------------------------------TEEEEEECTTCCEEE
T ss_pred EEEEEcCCccccCCCcceEEE--EC----------------------------------------CEEEEEcCCCCCEEE
Confidence 55554433 4666665 11 24777764 245699
Q ss_pred EEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC----------CcEEEEEcCCCCcEEEEeccccCCCCC
Q psy5792 164 GIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH----------GTISRTHRDGTGRENIIEYVETGDPTP 233 (377)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~----------~~I~~~~~~G~~~~~i~~~~~~~~~~~ 233 (377)
.+++..... +..+.....|.++.+++ ++++|+++... +.|++++.........+.. ..
T Consensus 156 viD~~t~~~-----~~~i~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~------~~ 223 (328)
T 3dsm_A 156 KIDTETDKV-----VDELTIGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF------KL 223 (328)
T ss_dssp EEETTTTEE-----EEEEECSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC------CT
T ss_pred EEECCCCeE-----EEEEEcCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec------CC
Confidence 998876532 12222345688899987 57899988654 7899999874332222220 11
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEE--EEeeCCCCCceeEEEcCCCCeEEEEe----cCCCCeEEEEe
Q psy5792 234 VDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRY--VLISGGVDQPSALAVDPESGYLFWSE----SGKIPLIARAG 307 (377)
Q Consensus 234 ~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~--~l~~~~~~~P~~iavdp~~g~lywtd----~g~~~~I~r~~ 307 (377)
-..|.+|++++.++.||+++. +|.+.+++..... .++......|.+|++||.+++||+++ .. +.+|.+.+
T Consensus 224 g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~-~~~V~v~d 299 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQ-QGIVYRYS 299 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSS-EEEEEEEC
T ss_pred CCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccccc-CCEEEEEC
Confidence 247999999998999999987 7999998764421 12222256899999999999999999 53 67999999
Q ss_pred cCCCCeEEEEecCCCCceEEEEeCC
Q psy5792 308 LDGKKQTILAQEIIMPIKDITLDRK 332 (377)
Q Consensus 308 ldG~~~~~l~~~~~~~P~glalD~~ 332 (377)
.+|+..+.+-.. ..|.+++.-++
T Consensus 300 ~~g~~~~~i~~G--~~P~~~~~~~~ 322 (328)
T 3dsm_A 300 PQGKLIDEFYVG--IIPGAFCWKLE 322 (328)
T ss_dssp TTCCEEEEEEEE--ESEEEEEEECC
T ss_pred CCCCEEEEEEec--cCcceEEEecc
Confidence 998776666543 57999888543
No 39
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=8.9e-15 Score=133.83 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=172.4
Q ss_pred CCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEEec-CCC-ceeEEeeecCCCCcccCCCcCCCCCCceecccc
Q psy5792 56 PDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVLRN-NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGP 132 (377)
Q Consensus 56 ~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~~~-~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~ 132 (377)
.....|.+|++ .++.||+++...+.|.+++.+|+....... ... |.++++. ++
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~-~~----------------------- 67 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTIS-SD----------------------- 67 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEEC-TT-----------------------
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEEC-CC-----------------------
Confidence 44678999999 577999999888899999966554333211 222 6676652 21
Q ss_pred CCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEE
Q psy5792 133 LSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISR 211 (377)
Q Consensus 133 ~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~ 211 (377)
..++++....+.|.+++.++. . .. ..+ .....|.++++|. ++.||+++...+.|++
T Consensus 68 -----------------g~l~v~~~~~~~i~~~~~~g~-~---~~-~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~ 124 (299)
T 2z2n_A 68 -----------------GEVWFTENAANKIGRITKKGI-I---KE-YTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGR 124 (299)
T ss_dssp -----------------SCEEEEETTTTEEEEECTTSC-E---EE-EECSSTTCCEEEEEECT-TSCEEEEETTTTEEEE
T ss_pred -----------------CCEEEeCCCCCeEEEECCCCc-E---EE-EeCCCcCCCceeeEECC-CCCEEEEecCCceEEE
Confidence 236677654456888887643 1 11 222 2456799999997 6789999988889999
Q ss_pred EEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCe
Q psy5792 212 THRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGY 291 (377)
Q Consensus 212 ~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ 291 (377)
++.+|........ .....|.+|++|. .++||+++...+.|.+.+++|.............|.+|++|+ .|.
T Consensus 125 ~d~~g~~~~~~~~-------~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~ 195 (299)
T 2z2n_A 125 ITDDGKIREYELP-------NKGSYPSFITLGS-DNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGN-DDA 195 (299)
T ss_dssp ECTTCCEEEEECS-------STTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSS
T ss_pred ECCCCCEEEecCC-------CCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECC-CCC
Confidence 9986543322222 3455799999995 579999998888999999977665443444567899999998 588
Q ss_pred EEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 292 LFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 292 lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
||+++.. ...|.+.+.+|.............|.+|++|. +++||+++. ..+.|.+++.+|
T Consensus 196 l~v~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~-~~~~i~~~d~~g 255 (299)
T 2z2n_A 196 LWFVEII-GNKIGRITTSGEITEFKIPTPNARPHAITAGA-GIDLWFTEW-GANKIGRLTSNN 255 (299)
T ss_dssp EEEEETT-TTEEEEECTTCCEEEEECSSTTCCEEEEEECS-TTCEEEEET-TTTEEEEEETTT
T ss_pred EEEEccC-CceEEEECCCCcEEEEECCCCCCCceeEEECC-CCCEEEecc-CCceEEEECCCC
Confidence 9999974 57999999866533321222357899999995 477999998 889999999975
No 40
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.74 E-value=1.7e-15 Score=147.20 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=121.8
Q ss_pred EEEECCCCEEEEEEcCCC-cEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCe
Q psy5792 190 VDFHAAEDYIYWVDIDHG-TISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQY 268 (377)
Q Consensus 190 l~~d~~~~~ly~sd~~~~-~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~ 268 (377)
+++++.++.|||++...+ +|++++.++......... ........|.++|+|+.+++||+++. .++|.++++++..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~---~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ---LGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQE 251 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE---CCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee---ccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCC
Confidence 777888889999998655 999999986554333310 00024567999999988899999876 6799999999876
Q ss_pred EEEE----eeC-CCCCce-eEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecC--------------CCCceEEE
Q psy5792 269 RYVL----ISG-GVDQPS-ALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI--------------IMPIKDIT 328 (377)
Q Consensus 269 ~~~l----~~~-~~~~P~-~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~--------------~~~P~gla 328 (377)
...+ ... ....|. +|++||.++.||++|.. +++|++.+.+|. ...+.... +..|.||+
T Consensus 252 ~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 252 VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 5544 211 123477 99999988999999985 789999999987 33444332 67899999
Q ss_pred EeCCCCEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 329 LDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 329 lD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
+|.. ++||++|....++|.++++..+...++.
T Consensus 330 ~d~d-G~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 330 VDED-GNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp ECTT-CCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred EeCC-CCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 9965 6699999524789999995544444443
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=1.6e-15 Score=139.02 Aligned_cols=174 Identities=13% Similarity=0.073 Sum_probs=133.4
Q ss_pred CceEEEEEECCCCEEEEEEcC-CCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEE
Q psy5792 185 SLAAKVDFHAAEDYIYWVDID-HGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVAR 263 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~-~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~ 263 (377)
..|.+++++..++.||+++.. .+.|.+++.+|.....+.. .....|.+|++|+ .++||+++...++|.+.+
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~-------~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGA-------TILQHPRGVTVDN-KGRIIVVECKVMRVIIFD 148 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECT-------TTCSCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecC-------ccCCCceEEEEeC-CCCEEEEECCCCEEEEEc
Confidence 457888887668999999964 7899999987755444433 3456799999997 578999999889999999
Q ss_pred cCCCeEEEEee-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec-CCCCceEEEEeCCCCEEEEEEe
Q psy5792 264 LTGQYRYVLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-IIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 264 ~~g~~~~~l~~-~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~-~~~~P~glalD~~~~~LYw~d~ 341 (377)
.+|.....+.. ..+..|++|++|+ +|.||+++.. ..+|.+.+.+|.....+... .+..|.+|++|. +++||+++.
T Consensus 149 ~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~ 225 (286)
T 1q7f_A 149 QNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNR-AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINS-NGEILIADN 225 (286)
T ss_dssp TTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGG-GTEEEEEETTCCEEEEESCTTTSCSEEEEEECT-TCCEEEEEC
T ss_pred CCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEECC-CCEEEEEcCCCCEEEEEccCCccCCCcEEEECC-CCCEEEEeC
Confidence 99987665543 3467899999998 6889999975 68999999988765554333 257899999995 578999999
Q ss_pred CCCC-eEEEEEccCCceEEEEecCCCCCcc
Q psy5792 342 VGSN-VLESMDYSGGSKMQLKLSSNIKNAL 370 (377)
Q Consensus 342 ~~~~-~i~~~~~~G~~~~~~~~~~~~~~p~ 370 (377)
..+ +|..++.+|...+++........|.
T Consensus 226 -~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 254 (286)
T 1q7f_A 226 -HNNFNLTIFTQDGQLISALESKVKHAQCF 254 (286)
T ss_dssp -SSSCEEEEECTTSCEEEEEEESSCCSCEE
T ss_pred -CCCEEEEEECCCCCEEEEEcccCCCCcce
Confidence 776 9999998876555554433333343
No 42
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.72 E-value=8.8e-15 Score=136.25 Aligned_cols=234 Identities=12% Similarity=0.097 Sum_probs=159.6
Q ss_pred CCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCC
Q psy5792 57 DAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSK 135 (377)
Q Consensus 57 ~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~ 135 (377)
....|.++++ .++.|||+|..+++|++++.+|+....+.....|.+|++. ++.
T Consensus 30 ~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~-~dG------------------------- 83 (306)
T 2p4o_A 30 VNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFT-SNG------------------------- 83 (306)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEEC-TTS-------------------------
T ss_pred CCCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEc-CCC-------------------------
Confidence 3468999999 5678999999999999999877655544433238888763 221
Q ss_pred ccccCCcCCCcCCCcEEEEEeCC--CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEE
Q psy5792 136 VSLAAKVDFHAGISDFILFSVNS--GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTH 213 (377)
Q Consensus 136 ~~~~~G~~~C~~~~~~l~~s~~~--~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~ 213 (377)
.+++++.. ...|.+++...... ..+........+.+++.. .++++|++|...+.|++++
T Consensus 84 ---------------~l~vad~~~~~~~v~~~d~~~g~~---~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d 144 (306)
T 2p4o_A 84 ---------------DLVATGWNADSIPVVSLVKSDGTV---ETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLID 144 (306)
T ss_dssp ---------------CEEEEEECTTSCEEEEEECTTSCE---EEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEE
T ss_pred ---------------cEEEEeccCCcceEEEEcCCCCeE---EEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEe
Confidence 26666622 22377766544333 233333444556777754 4789999998889999999
Q ss_pred cCCCCcEEEEecccc---CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC--C--eEEEEeeCCCCCceeEEEc
Q psy5792 214 RDGTGRENIIEYVET---GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG--Q--YRYVLISGGVDQPSALAVD 286 (377)
Q Consensus 214 ~~G~~~~~i~~~~~~---~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g--~--~~~~l~~~~~~~P~~iavd 286 (377)
.++...+........ .....+..|.+|.. .+++||++|...++|.++++++ . ..+++.. +..|.+|++|
T Consensus 145 ~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~--dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd 220 (306)
T 2p4o_A 145 VVQPSGSIWLEHPMLARSNSESVFPAANGLKR--FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFD 220 (306)
T ss_dssp TTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEB
T ss_pred CCCCcEeEEEECCccccccccCCCCcCCCcCc--CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEEC
Confidence 875322222110000 01134567999944 4789999999999999999985 2 2333333 4679999999
Q ss_pred CCCCeEEEEecCCCCeEEEEecCCCCeEEE-EecCCCCceEEEEe---CCCCEEEEEEe
Q psy5792 287 PESGYLFWSESGKIPLIARAGLDGKKQTIL-AQEIIMPIKDITLD---RKNKRVYWCYS 341 (377)
Q Consensus 287 p~~g~lywtd~g~~~~I~r~~ldG~~~~~l-~~~~~~~P~glalD---~~~~~LYw~d~ 341 (377)
+ +|.||+++++ +.+|.+++.+|+...+. +...+.+|.+++++ ...++||+++.
T Consensus 221 ~-dG~l~va~~~-~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 221 V-EGNLYGATHI-YNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp T-TCCEEEECBT-TCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred C-CCCEEEEeCC-CCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 8 6899999986 68999999887543221 12236789999998 56799999998
No 43
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=6.3e-14 Score=131.28 Aligned_cols=273 Identities=9% Similarity=0.069 Sum_probs=191.1
Q ss_pred CCcCCccccccCCCCeEEEEeCC------CCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEE
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKTL------SHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSI 84 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~~------~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~ 84 (377)
....|.++++++++++||++... .+.|..+|+++. ....+ .....|.++++ .++++|+++...+.|..+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI--HNDLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE--EESSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE--ecCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 34578999999999999999976 678999999766 33333 33456888998 445799999988999999
Q ss_pred c-CCCCceEEEecCCC----------ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEE
Q psy5792 85 N-LDGSNSTVLRNNAG----------ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFIL 153 (377)
Q Consensus 85 ~-~~g~~~~~~~~~~~----------p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~ 153 (377)
+ .+|+....+..... |.++.+ +++. ..++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg---------------------------------------~~l~ 156 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA-DDAT---------------------------------------NTVY 156 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE-ETTT---------------------------------------TEEE
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEE-CCCC---------------------------------------CEEE
Confidence 9 66766555543210 333333 2221 2466
Q ss_pred EEe-CCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 154 FSV-NSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 154 ~s~-~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++. ...+.|..+++..... +..+. ....+.++++++.++.||+++. .+.|..+++........... ...
T Consensus 157 ~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~---~~~ 227 (353)
T 3vgz_A 157 ISGIGKESVIWVVDGGNIKL-----KTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKL---LDD 227 (353)
T ss_dssp EEEESSSCEEEEEETTTTEE-----EEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEEC---CCS
T ss_pred EEecCCCceEEEEcCCCCce-----EEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEc---CCC
Confidence 666 3445688888875532 22223 2345888999998999999985 67899888864333222220 000
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
.....|.++++++.++.||+++...+.|.+.++........+. ...|.+++++|..++||+++.. ...|...++...
T Consensus 228 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~ 304 (353)
T 3vgz_A 228 GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA--APESLAVLFNPARNEAYVTHRQ-AGKVSVIDAKSY 304 (353)
T ss_dssp SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE--CSSCCCEEEETTTTEEEEEETT-TTEEEEEETTTT
T ss_pred CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE--cCCCceEEECCCCCEEEEEECC-CCeEEEEECCCC
Confidence 0123477899999888899999988999999997654433333 3457899999988889999975 589999998654
Q ss_pred CeEEEEecCCCCceEEEEeCCCCEEEEEEe
Q psy5792 312 KQTILAQEIIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 312 ~~~~l~~~~~~~P~glalD~~~~~LYw~d~ 341 (377)
.....+.. -..|.++++++.++.||++..
T Consensus 305 ~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 305 KVVKTFDT-PTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EEEEEEEC-CSEEEEEEECTTSCEEEEEEE
T ss_pred eEEEEEec-CCCCCeEEEcCCCCEEEEEEc
Confidence 43333333 358999999988888999987
No 44
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=3.6e-15 Score=146.83 Aligned_cols=167 Identities=11% Similarity=0.128 Sum_probs=125.1
Q ss_pred CCceEEEEE-------ECCCCEEEEEEcCCC------cEEEEEcCC--CCcE----EEEeccccCCCCCCCCcceEEEec
Q psy5792 184 VSLAAKVDF-------HAAEDYIYWVDIDHG------TISRTHRDG--TGRE----NIIEYVETGDPTPVDQFTDIAVDW 244 (377)
Q Consensus 184 ~~~~~~l~~-------d~~~~~ly~sd~~~~------~I~~~~~~G--~~~~----~i~~~~~~~~~~~~~~p~~iavD~ 244 (377)
+.+|.++++ |..+++||++|...+ .|+.++.+. .... ..+. ...+|.++++|+
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--------~~~~p~giavdp 256 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA--------AYKQCNGATIHP 256 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE--------EESCCCCEEECT
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec--------cCCCceEEEEcC
Confidence 346888888 887888999998753 377775543 3321 2222 356899999999
Q ss_pred cCCeEEEEcCCCCEEEEEEcC--------CCe-----------EEEEeeC-CCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5792 245 IAQNIYWSDPKENVIEVARLT--------GQY-----------RYVLISG-GVDQPSALAVDPESGYLFWSESGKIPLIA 304 (377)
Q Consensus 245 ~~~~lYwtd~~~~~I~~~~~~--------g~~-----------~~~l~~~-~~~~P~~iavdp~~g~lywtd~g~~~~I~ 304 (377)
.+++||+++...++|++++++ +.. .+.+... ....|.+||+||....||++|.+ +++|+
T Consensus 257 ~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~-~h~I~ 335 (496)
T 3kya_A 257 INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN-NHYFM 335 (496)
T ss_dssp TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT-TTEEE
T ss_pred CCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC-CCEEE
Confidence 899999999999999999997 322 2233332 34579999999987789999986 79999
Q ss_pred EEecCCCCe-----EEEEec--------------CCCCce-EEEEeC------CCCEEEEEEeCCCCeEEEEEccCCceE
Q psy5792 305 RAGLDGKKQ-----TILAQE--------------IIMPIK-DITLDR------KNKRVYWCYSVGSNVLESMDYSGGSKM 358 (377)
Q Consensus 305 r~~ldG~~~-----~~l~~~--------------~~~~P~-glalD~------~~~~LYw~d~~~~~~i~~~~~~G~~~~ 358 (377)
+++++|... .++... .|.+|. |+++|. .++.||++|. .+++|++++.+| ...
T Consensus 336 kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~-~N~rIr~i~~~G-~v~ 413 (496)
T 3kya_A 336 RSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDR-LNFCVRKVTPEG-IVS 413 (496)
T ss_dssp EEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEG-GGTEEEEECTTC-BEE
T ss_pred EEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEEC-CCCEEEEEeCCC-CEE
Confidence 999988642 344432 367899 888873 5789999999 999999999886 455
Q ss_pred EEE
Q psy5792 359 QLK 361 (377)
Q Consensus 359 ~~~ 361 (377)
++.
T Consensus 414 Tia 416 (496)
T 3kya_A 414 TYA 416 (496)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 45
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=2.3e-15 Score=141.57 Aligned_cols=168 Identities=13% Similarity=0.062 Sum_probs=131.8
Q ss_pred CCCceEEEEEECCCCEEEEEEcCC------------------------CcEEEEEcC-CCCcEEEEeccccCCCCCCCCc
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDIDH------------------------GTISRTHRD-GTGRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~~------------------------~~I~~~~~~-G~~~~~i~~~~~~~~~~~~~~p 237 (377)
.+..+.++++|+ +++||+++... +.|++++.+ |........ ..+..|
T Consensus 22 ~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-------~~~~~p 93 (329)
T 3fvz_A 22 LPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK-------NLFYLP 93 (329)
T ss_dssp CCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT-------TTCSSE
T ss_pred ecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC-------CccCCc
Confidence 467799999998 57999999876 368888886 433222222 346689
Q ss_pred ceEEEeccCCeEEEEcCCCCEEEEEEcCCC--eEEEEe--------eCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5792 238 TDIAVDWIAQNIYWSDPKENVIEVARLTGQ--YRYVLI--------SGGVDQPSALAVDPESGYLFWSESGKIPLIARAG 307 (377)
Q Consensus 238 ~~iavD~~~~~lYwtd~~~~~I~~~~~~g~--~~~~l~--------~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ 307 (377)
.+||+|+ .++||++|...++|.+.+++|. ....+. ...+..|.+|++||.+|.||++|...+.+|.+.+
T Consensus 94 ~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 94 HGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp EEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred eEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 9999996 6779999999999999999997 444443 2346689999999989999999951268999999
Q ss_pred cCCCCeEEEEec---------CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc-CCceEEE
Q psy5792 308 LDGKKQTILAQE---------IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS-GGSKMQL 360 (377)
Q Consensus 308 ldG~~~~~l~~~---------~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~-G~~~~~~ 360 (377)
.+|.....+... .+..|.||++|+.+++||++|. ..++|..++.+ |.-.+++
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-ENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-TTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-CCCEEEEEECCCCcEEEEE
Confidence 999877666422 2567999999987799999999 99999999998 6544444
No 46
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=7.6e-14 Score=128.57 Aligned_cols=236 Identities=12% Similarity=0.081 Sum_probs=170.5
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCcEEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcC-CCCceE
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVKVAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINL-DGSNST 92 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~-~g~~~~ 92 (377)
+..|.|++.|++++.|||++...+.|.++++++..+.+. .....|.+|++ .++.||+++...+.|.+++. +|+...
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEM--HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEE--SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEE--CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 568999999998888999999999999999998833343 44567999999 67789999988888998884 664322
Q ss_pred EEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCc
Q psy5792 93 VLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNES 172 (377)
Q Consensus 93 ~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~ 172 (377)
.... . .+
T Consensus 105 ~~~~-----------------------------------------------------------~-----------~~--- 111 (296)
T 3e5z_A 105 IADS-----------------------------------------------------------F-----------EG--- 111 (296)
T ss_dssp EECE-----------------------------------------------------------E-----------TT---
T ss_pred Eeec-----------------------------------------------------------c-----------CC---
Confidence 2110 0 00
Q ss_pred eeeEEEEecCCCCceEEEEEECCCCEEEEEEc-----------------CCCcEEEEEcCCCCcEEEEeccccCCCCCCC
Q psy5792 173 KVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI-----------------DHGTISRTHRDGTGRENIIEYVETGDPTPVD 235 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~-----------------~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~ 235 (377)
.....+.++++|+ ++++|++|. ..+.|++++.+|. .+.+. ..+.
T Consensus 112 ---------~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~--------~~~~ 172 (296)
T 3e5z_A 112 ---------KKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPI--------RDRV 172 (296)
T ss_dssp ---------EECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEE--------CCCS
T ss_pred ---------CCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEee--------cCCC
Confidence 0011244566676 567888764 2358998888743 33333 4677
Q ss_pred CcceEEEeccCCeEEEEcCCCCEEEEEEcC--CCe---EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 236 QFTDIAVDWIAQNIYWSDPKENVIEVARLT--GQY---RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 236 ~p~~iavD~~~~~lYwtd~~~~~I~~~~~~--g~~---~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
.|.+|++++.++.| |++...++|.+.+++ |.. .+++ ......|.+|++|+ +|.||++. ...|.+.+.+|
T Consensus 173 ~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~-~G~l~v~~---~~~v~~~~~~g 246 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDA-GGLIWASA---GDGVHVLTPDG 246 (296)
T ss_dssp SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBT-TSCEEEEE---TTEEEEECTTS
T ss_pred CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECC-CCCEEEEc---CCeEEEECCCC
Confidence 89999999866666 999999999999985 444 3344 44566799999997 68899998 36899999997
Q ss_pred CCeEEEEecCCCCceEEEEe-CCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 311 KKQTILAQEIIMPIKDITLD-RKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 311 ~~~~~l~~~~~~~P~glalD-~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.....+... .. |..++++ ...+.||++.. +.+.+++....
T Consensus 247 ~~~~~~~~~-~~-~~~~~f~~~d~~~L~v~t~---~~l~~~~~~~~ 287 (296)
T 3e5z_A 247 DELGRVLTP-QT-TSNLCFGGPEGRTLYMTVS---TEFWSIETNVR 287 (296)
T ss_dssp CEEEEEECS-SC-CCEEEEESTTSCEEEEEET---TEEEEEECSCC
T ss_pred CEEEEEECC-CC-ceeEEEECCCCCEEEEEcC---CeEEEEEcccc
Confidence 765555443 24 8999995 45567888766 57999988743
No 47
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.65 E-value=8.2e-13 Score=122.88 Aligned_cols=280 Identities=8% Similarity=0.061 Sum_probs=189.2
Q ss_pred cccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCc-eEEEe
Q psy5792 22 LKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSN-STVLR 95 (377)
Q Consensus 22 ~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~-~~~~~ 95 (377)
..+..+.++|+++...+.|..+|++.. ...+. .....| ++++ .+.+||+++...+.|..++ .+++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT--LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE--CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE--ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 455667899999999999999999866 44443 445567 9999 4557999999889999999 56665 44444
Q ss_pred cCCCcee-EEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCC--eEEEEEcCCCCc
Q psy5792 96 NNAGISD-FILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGY--DIMGIKYNKNES 172 (377)
Q Consensus 96 ~~~~p~~-i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~--~I~~~~l~~~~~ 172 (377)
....|.. +.+ +++.+ +++.+....+ .|..++++....
T Consensus 81 ~~~~~~~~~~~-s~dg~---------------------------------------~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 81 EGQSSMADVDI-TPDDQ---------------------------------------FAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp ECSSCCCCEEE-CTTSS---------------------------------------EEEECCCSSSSCEEEEEETTTTEE
T ss_pred cCCCCccceEE-CCCCC---------------------------------------EEEEecCCCCcccEEEEECCCCCe
Confidence 4434555 544 33322 3443333312 588888876532
Q ss_pred eeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCc-EEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEE
Q psy5792 173 KVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGT-ISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYW 251 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~-I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYw 251 (377)
+..+.....+.++++++.+++||+++...+. |...+++......-...... ..-..|.++++++.++.||+
T Consensus 121 -----~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 121 -----ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI---SGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp -----EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE---CSSSSEEEEEECTTSSEEEE
T ss_pred -----EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc---cCCCCccceEECCCCCEEEE
Confidence 2223344568999999988889999988777 77777764322110000000 12345999999988778999
Q ss_pred EcCCCCEEEEEEcCCCeE---EEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEe--cC------
Q psy5792 252 SDPKENVIEVARLTGQYR---YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ--EI------ 320 (377)
Q Consensus 252 td~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~--~~------ 320 (377)
++...++|.+.+++.... ...+.. ...|.+++++|...+||++..+ ...|...++.....+.+.. ..
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTES-TVDVFNFNQLSGTLSFVKSFGHGLLIDPR 270 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSS-EEEEEEEETTTTEEEEEEEEECCCCCCCG
T ss_pred EeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcC-CCEEEEEECCCCceeeecccccccccCCC
Confidence 999889999999975432 222332 4679999999988889999864 4678888887543322211 11
Q ss_pred -CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 321 -IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 321 -~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
....+++++.+.+++||++.. ..+.|...++.+.
T Consensus 271 ~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 271 PLFGANQMALNKTETKLFISAN-ISRELKVFTISGK 305 (331)
T ss_dssp GGTTCCCEEECTTSSEEEEEET-TTTEEEEEETTSC
T ss_pred CcccccceEECCCCCEEEEecC-CCCcEEEEEecCC
Confidence 111245899988899999999 8899999999854
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=1.2e-14 Score=131.55 Aligned_cols=190 Identities=14% Similarity=0.173 Sum_probs=140.6
Q ss_pred EEEE-EeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC
Q psy5792 151 FILF-SVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG 229 (377)
Q Consensus 151 ~l~~-s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~ 229 (377)
.+++ ++...+.|.+++.++... ...+......|.++++|. ++.||+++. .+.|++++.+|.....+..
T Consensus 36 ~l~v~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~----- 104 (270)
T 1rwi_B 36 NVYVTSEGMYGRVVKLATGSTGT----TVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPF----- 104 (270)
T ss_dssp CEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCC-----
T ss_pred CEEEEccCCCCcEEEecCCCccc----ceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeec-----
Confidence 4777 655555688887654422 223334556799999998 456999998 7899999998865544433
Q ss_pred CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 230 DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
..+..|.+|++|+ .++||+++...++|.+.+.............+..|.+|++|+ +|.||+++.+ ..+|.+.+.+
T Consensus 105 --~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~ 179 (270)
T 1rwi_B 105 --DGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTD-NNRVVKLEAE 179 (270)
T ss_dssp --CSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGG-GTEEEEECTT
T ss_pred --CCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECC-CCEEEEEecC
Confidence 3456799999997 678999999889999997654433333333467899999998 6789999975 5799999999
Q ss_pred CCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceE
Q psy5792 310 GKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKM 358 (377)
Q Consensus 310 G~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~ 358 (377)
+..........+..|.+|++|. +++||+++. ..++|.+++.+|....
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~-~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDE-AGTVYVTEH-NTNQVVKLLAGSTTST 226 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECT-TCCEEEEET-TTSCEEEECTTCSCCE
T ss_pred CCceEeecccCCCCceEEEECC-CCCEEEEEC-CCCcEEEEcCCCCcce
Confidence 8766554444468899999996 469999999 8899999999875443
No 49
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.64 E-value=3.6e-13 Score=124.60 Aligned_cols=227 Identities=11% Similarity=0.137 Sum_probs=161.2
Q ss_pred CCCCceEEEEEE--CCeEEEEcCCCCceEEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccC
Q psy5792 56 PDAAQVVAAVFY--KGRIIYSDANDGNIRSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPL 133 (377)
Q Consensus 56 ~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~ 133 (377)
.....+.|.++. ++.|||+|...++|++++.++.....+.....|.++++ +++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~-~~dG----------------------- 65 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVAL-RQSG----------------------- 65 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEE-BTTS-----------------------
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEE-CCCC-----------------------
Confidence 566788999984 58999999999999999955544444443333666665 2222
Q ss_pred CCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC---CCCceEEEEEECCCCEEEEEEc------
Q psy5792 134 SKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS---KVSLAAKVDFHAAEDYIYWVDI------ 204 (377)
Q Consensus 134 ~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~---~~~~~~~l~~d~~~~~ly~sd~------ 204 (377)
.++++..+. |.+++.+.... ..+.... ....+.++++|+ ++++|+++.
T Consensus 66 -----------------~l~v~~~~~--l~~~d~~~g~~---~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~ 122 (297)
T 3g4e_A 66 -----------------GYVATIGTK--FCALNWKEQSA---VVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAP 122 (297)
T ss_dssp -----------------SEEEEETTE--EEEEETTTTEE---EEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBT
T ss_pred -----------------CEEEEECCe--EEEEECCCCcE---EEEEecCCCCCCCCCCCEEECC-CCCEEEecCCccccc
Confidence 266666655 88888875533 2222221 234588999998 566999873
Q ss_pred -----CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC---CCe--EEEEee
Q psy5792 205 -----DHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT---GQY--RYVLIS 274 (377)
Q Consensus 205 -----~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~---g~~--~~~l~~ 274 (377)
..+.|++++.+|.. ..+. ..+..|.+|++++.++.|||++...++|.+++++ |.. ++++..
T Consensus 123 ~~~~~~~~~l~~~d~~g~~-~~~~--------~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~ 193 (297)
T 3g4e_A 123 AVLERHQGALYSLFPDHHV-KKYF--------DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYK 193 (297)
T ss_dssp TBCCTTCEEEEEECTTSCE-EEEE--------EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEE
T ss_pred ccccCCCcEEEEEECCCCE-EEEe--------eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEE
Confidence 23589999887643 3333 3566799999998888899999999999999874 332 334443
Q ss_pred C--CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC-CCCeEEEEecCCCCceEEEEe-CCCCEEEEEEe
Q psy5792 275 G--GVDQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTILAQEIIMPIKDITLD-RKNKRVYWCYS 341 (377)
Q Consensus 275 ~--~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld-G~~~~~l~~~~~~~P~glalD-~~~~~LYw~d~ 341 (377)
. ....|.++++|+ +|.||+++++ ..+|.+.+.+ |+....+... ..+|..+++. +..++||++..
T Consensus 194 ~~~~~~~p~g~~~d~-~G~lwva~~~-~~~v~~~d~~tG~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 194 LEKEEQIPDGMCIDA-EGKLWVACYN-GGRVIRLDPVTGKRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CCGGGCEEEEEEEBT-TSCEEEEEET-TTEEEEECTTTCCEEEEEECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCCCCCeeEECC-CCCEEEEEcC-CCEEEEEcCCCceEEEEEECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 2 235799999997 6899999985 5789999997 6655554332 4689999997 56789999987
No 50
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.64 E-value=8.9e-12 Score=118.59 Aligned_cols=272 Identities=14% Similarity=0.141 Sum_probs=201.0
Q ss_pred CeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCCceeE
Q psy5792 28 PFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAGISDF 103 (377)
Q Consensus 28 ~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~p~~i 103 (377)
+++|++....+.|...|++.. ....+ .....|.++++ .+.+||++....+.|..++ .+|+....+.....+.++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATI--PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEe--ecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccce
Confidence 578999999999999999866 33333 34456899999 4557899988888999999 667666555443346666
Q ss_pred EeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCC
Q psy5792 104 ILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSK 183 (377)
Q Consensus 104 ~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~ 183 (377)
++ +++. ..|+++....+.|+.+++..... +..+..
T Consensus 80 ~~-spdg---------------------------------------~~l~~~~~~~~~v~v~d~~~~~~-----~~~~~~ 114 (391)
T 1l0q_A 80 AV-SPDG---------------------------------------KQVYVTNMASSTLSVIDTTSNTV-----AGTVKT 114 (391)
T ss_dssp EE-CTTS---------------------------------------SEEEEEETTTTEEEEEETTTTEE-----EEEEEC
T ss_pred EE-CCCC---------------------------------------CEEEEEECCCCEEEEEECCCCeE-----EEEEeC
Confidence 54 3322 25777776656799999876532 222334
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVAR 263 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~ 263 (377)
...+.++++++.++.||++....+.|+..++.......... .-..|.++++++.++.||++....++|.+.+
T Consensus 115 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 115 GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS--------VGRSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe--------cCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 45789999999888999999888999999987544333333 2346899999988888999988889999999
Q ss_pred cCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecC-CCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeC
Q psy5792 264 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG-KIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSV 342 (377)
Q Consensus 264 ~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g-~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~ 342 (377)
+........+.. ...|.+++++|.+.+||.+... ....|...++........+.. -..|.++++++.+++||++..
T Consensus 187 ~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~s~~- 263 (391)
T 1l0q_A 187 TVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALS- 263 (391)
T ss_dssp TTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEET-
T ss_pred CCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec-CCCccEEEEccCCCEEEEEcC-
Confidence 987765555543 4578999999988899998852 257899999875544444443 356889999988889999988
Q ss_pred CCCeEEEEEccCCce
Q psy5792 343 GSNVLESMDYSGGSK 357 (377)
Q Consensus 343 ~~~~i~~~~~~G~~~ 357 (377)
..++|...++..+..
T Consensus 264 ~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 264 FXNTVSVIDTATNTI 278 (391)
T ss_dssp TTTEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCcE
Confidence 889999999875443
No 51
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=5.3e-14 Score=133.07 Aligned_cols=243 Identities=10% Similarity=0.041 Sum_probs=160.5
Q ss_pred cCCccccccCCCCeEEEEeCC--CC--cEEEEEcCCcEEEEE-----eCCCCCceEEEEE-ECCeEEEEcCC-----CCc
Q psy5792 16 GAVASTLKPQSGPFVYGVKTL--SH--SLHYVNIEVKVAKVV-----SMPDAAQVVAAVF-YKGRIIYSDAN-----DGN 80 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~--~~--~I~~~~~dG~~~~i~-----~~~~~~~p~~lav-~~~~ly~td~~-----~~~ 80 (377)
..|.|++++++ +++|++... .+ +|..++ +|+...+- ....+..|.+|++ .+++|||+|.. ..+
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 58999999975 589999753 23 789988 77633221 0134678999999 46899999976 456
Q ss_pred eEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCC
Q psy5792 81 IRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSG 159 (377)
Q Consensus 81 I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~ 159 (377)
|.+++ .+|+..
T Consensus 95 i~~~d~~tg~~~-------------------------------------------------------------------- 106 (343)
T 2qe8_A 95 LVAWDTLNNQLS-------------------------------------------------------------------- 106 (343)
T ss_dssp EEEEETTTTEEE--------------------------------------------------------------------
T ss_pred EEEEECCCCeEE--------------------------------------------------------------------
Confidence 77776 334322
Q ss_pred CeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEc---CCCcEEEEEcCCCCcEEEEeccccCCC-----
Q psy5792 160 YDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI---DHGTISRTHRDGTGRENIIEYVETGDP----- 231 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~---~~~~I~~~~~~G~~~~~i~~~~~~~~~----- 231 (377)
+.+.+..... .....+.++++|+.++.+|++|. ..+.|.+++++......+........+
T Consensus 107 ---~~~~~~~~~~---------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 107 ---RVIYLPPPIT---------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp ---EEEECCTTTS---------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred ---EEEECChhhc---------ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 2222211100 01123567788877789999998 677888888864332222210000000
Q ss_pred --C---------------CCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC----CCe--------EEEEeeCCCCCcee
Q psy5792 232 --T---------------PVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT----GQY--------RYVLISGGVDQPSA 282 (377)
Q Consensus 232 --~---------------~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~----g~~--------~~~l~~~~~~~P~~ 282 (377)
. ....|.+||+++.++.||+++...++|++++.+ +.. ...+- ....|.|
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--~~g~pdg 252 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS--EKPICDG 252 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE--ECCSCSC
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc--cCCCCce
Confidence 0 012479999999888999999988899999853 110 01111 2347999
Q ss_pred EEEcCCCCeEEEEecCCCCeEEEEec-CCCCeEEEEec-CCCCceEEEEeCCCCEEEEEEeCCCCeE
Q psy5792 283 LAVDPESGYLFWSESGKIPLIARAGL-DGKKQTILAQE-IIMPIKDITLDRKNKRVYWCYSVGSNVL 347 (377)
Q Consensus 283 iavdp~~g~lywtd~g~~~~I~r~~l-dG~~~~~l~~~-~~~~P~glalD~~~~~LYw~d~~~~~~i 347 (377)
|++|+ .|.||+++++ ..+|.+.+. +|+ ...+... .+.+|.+++++. .++||+++. ..+++
T Consensus 253 ia~d~-~G~l~va~~~-~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~-~g~l~v~~~-~~~~~ 314 (343)
T 2qe8_A 253 ISIDK-DHNIYVGDLA-HSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGS-DGYLYFDCN-QLHHS 314 (343)
T ss_dssp EEECT-TCCEEEEEGG-GTEEEEEETTTTE-EEEEEECGGGSCEEEEEECT-TSCEEEEEC-CGGGS
T ss_pred EEECC-CCCEEEEccC-CCeEEEEECCCCC-EEEEEECCceecCCeeEECC-CCcEEEEeC-ccccc
Confidence 99998 6999999986 689999999 775 3444443 378899999985 588999998 65544
No 52
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=3.3e-12 Score=119.96 Aligned_cols=267 Identities=9% Similarity=0.031 Sum_probs=167.6
Q ss_pred CCCCceEEEEE-ECCeEEEEcCC--CCceEEEc-CCCCceEE--Ee-cCCCceeEEeeecCCCCcccCCCcCCCCCCcee
Q psy5792 56 PDAAQVVAAVF-YKGRIIYSDAN--DGNIRSIN-LDGSNSTV--LR-NNAGISDFILFSVNSGYDIMGIKYNKNESKVQQ 128 (377)
Q Consensus 56 ~~~~~p~~lav-~~~~ly~td~~--~~~I~~~~-~~g~~~~~--~~-~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~ 128 (377)
.....|.+|++ .+++||+++.. .+.|..++ .+|+...+ +. ....|.++++ +++.+
T Consensus 37 ~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~-spdg~----------------- 98 (347)
T 3hfq_A 37 AATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV-DEARQ----------------- 98 (347)
T ss_dssp EECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE-ETTTT-----------------
T ss_pred eccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE-CCCCC-----------------
Confidence 44678999999 45669999864 57888888 44432221 11 1222667665 34322
Q ss_pred ccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEe--cC--------CCCceEEEEEECCCCE
Q psy5792 129 VLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGP--LS--------KVSLAAKVDFHAAEDY 198 (377)
Q Consensus 129 ~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~--~~--------~~~~~~~l~~d~~~~~ 198 (377)
+|+++....+.|..++++.... ...+.. .. ....+.++++++.++
T Consensus 99 ----------------------~l~~~~~~~~~v~v~~~~~~g~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~- 153 (347)
T 3hfq_A 99 ----------------------LVYSANYHKGTAEVMKIAADGA--LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR- 153 (347)
T ss_dssp ----------------------EEEEEETTTTEEEEEEECTTSC--EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-
T ss_pred ----------------------EEEEEeCCCCEEEEEEeCCCCC--eeecceeecCCCCCCccccCCCceEEEECCCCc-
Confidence 5777775555688887753322 111111 11 123578899999766
Q ss_pred EEEEEcCCCcEEEEEcCC-CCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC--CeEEEE--e
Q psy5792 199 IYWVDIDHGTISRTHRDG-TGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG--QYRYVL--I 273 (377)
Q Consensus 199 ly~sd~~~~~I~~~~~~G-~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g--~~~~~l--~ 273 (377)
+|+++...+.|..++++. .....+... .. ..-..|.++++++.++.||+++...++|.+.+++. ...+.+ +
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~---~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 229 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQLSEQSVL-TM---EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV 229 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEE-EC---CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeeeE-Ec---CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee
Confidence 999998888998888872 222222110 00 12236899999987777999999889998888874 222111 1
Q ss_pred eCC------CCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-eEEE--EecCCCCceEEEEeCCCCEEEEEEeCCC
Q psy5792 274 SGG------VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTIL--AQEIIMPIKDITLDRKNKRVYWCYSVGS 344 (377)
Q Consensus 274 ~~~------~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-~~~l--~~~~~~~P~glalD~~~~~LYw~d~~~~ 344 (377)
... ...|.+++++|...+||+++.+ ...|...+++..+ .+.+ +...-..|.++++++.+++||.++. ..
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~ 307 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ-NT 307 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEET-TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET-TT
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCC-CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc-CC
Confidence 111 1458899999988889999875 5777777776322 2222 1211346999999988889999998 77
Q ss_pred CeEEEE--EccCCceEEEEecCCCCCccc
Q psy5792 345 NVLESM--DYSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 345 ~~i~~~--~~~G~~~~~~~~~~~~~~p~~ 371 (377)
+.|... +...+..+.+-....++.|..
T Consensus 308 ~~v~v~~~d~~tg~l~~~~~~~~~p~p~~ 336 (347)
T 3hfq_A 308 DNATLYARDLTSGKLSLLQKDVTVPEGVC 336 (347)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECTTEEE
T ss_pred CcEEEEEEeCCCCeEEecccceecCCCcE
Confidence 877766 444444444433334666643
No 53
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=5.8e-13 Score=124.38 Aligned_cols=252 Identities=13% Similarity=0.146 Sum_probs=169.7
Q ss_pred CCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCC-CCceEEEecCCC-ceeEEeeecCCCCcccCCCcCC
Q psy5792 46 EVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLD-GSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNK 121 (377)
Q Consensus 46 dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~ 121 (377)
.+. ...+. .....|.++++ .++.|||++...+.|.+++.+ |+.......... |.++++. ++.
T Consensus 33 ~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~-~dg----------- 98 (333)
T 2dg1_A 33 TAEPWLEIS--KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIH-KDG----------- 98 (333)
T ss_dssp ECEEEEEEE--SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEEC-TTS-----------
T ss_pred ccceeEEEe--ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEEC-CCC-----------
Confidence 344 55554 56677899999 577899999988999999954 544443322223 7777652 222
Q ss_pred CCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCC----CeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCC
Q psy5792 122 NESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSG----YDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAED 197 (377)
Q Consensus 122 ~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~----~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~ 197 (377)
.++++.... +.|.+++.++... ...+........+.++++|+ ++
T Consensus 99 -----------------------------~l~v~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~i~~d~-~g 146 (333)
T 2dg1_A 99 -----------------------------RLFVCYLGDFKSTGGIFAATENGDNL--QDIIEDLSTAYCIDDMVFDS-KG 146 (333)
T ss_dssp -----------------------------CEEEEECTTSSSCCEEEEECTTSCSC--EEEECSSSSCCCEEEEEECT-TS
T ss_pred -----------------------------cEEEEeCCCCCCCceEEEEeCCCCEE--EEEEccCccCCcccceEECC-CC
Confidence 255554322 3488888776644 11221122334688999998 57
Q ss_pred EEEEEEcC------CCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEc--CCCeE
Q psy5792 198 YIYWVDID------HGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARL--TGQYR 269 (377)
Q Consensus 198 ~ly~sd~~------~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~--~g~~~ 269 (377)
.+|+++.. .+.|++++.++...+.+.. ....|.++++++.++.||+++...++|.+.++ +|...
T Consensus 147 ~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~ 218 (333)
T 2dg1_A 147 GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTI 218 (333)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSE
T ss_pred CEEEEeccccccCCCceEEEEeCCCCEEEEeec--------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCc
Confidence 89998864 4689999887655444433 34569999999876679999988889999999 44432
Q ss_pred EE-----Eee-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecC-----CCCceEEEEeCCCCEEEE
Q psy5792 270 YV-----LIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI-----IMPIKDITLDRKNKRVYW 338 (377)
Q Consensus 270 ~~-----l~~-~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~-----~~~P~glalD~~~~~LYw 338 (377)
.. ... .....|.+|++|+ .|.||+++.+ ...|.+.+.+|.....+.... +..|.++++++.+++||+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~-~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 219 QPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYG-QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEET-TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred ccccceEEEecCCCCCCCceEECC-CCCEEEEEcC-CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEE
Confidence 21 111 1234799999997 6889999875 578999998876555543321 126899999866679999
Q ss_pred EEeCC-----CCeEEEEEccC
Q psy5792 339 CYSVG-----SNVLESMDYSG 354 (377)
Q Consensus 339 ~d~~~-----~~~i~~~~~~G 354 (377)
+.. . .+.|++++...
T Consensus 297 ~~~-~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 297 CSN-DIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEE-CGGGTCCEEEEEEECSS
T ss_pred EeC-ccCCCCCceEEEEeccc
Confidence 988 5 34788887654
No 54
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.61 E-value=1.1e-13 Score=131.61 Aligned_cols=234 Identities=12% Similarity=0.094 Sum_probs=153.9
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCcEEEEEe----CCCCCceEEEEEEC-----CeEEEEcCCC-----Cc
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVKVAKVVS----MPDAAQVVAAVFYK-----GRIIYSDAND-----GN 80 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~~~~i~~----~~~~~~p~~lav~~-----~~ly~td~~~-----~~ 80 (377)
+..|.++++++++ +||+++.. ++|.+++ +|+.+.+.. ......|.||++.. ++||+++... ++
T Consensus 30 l~~P~~ia~~pdG-~l~V~e~~-g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDG-GMLIAERP-GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTS-CEEEEETT-TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCC-eEEEEeCC-CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 6789999999864 79999986 9999999 777333321 13467899999965 4999998754 56
Q ss_pred eEEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCC
Q psy5792 81 IRSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGY 160 (377)
Q Consensus 81 I~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~ 160 (377)
|.+++.++...... ..+
T Consensus 107 v~r~~~~~~~~~~~--------------------------------------------------------~~l------- 123 (352)
T 2ism_A 107 VVRLRHLGERGVLD--------------------------------------------------------RVV------- 123 (352)
T ss_dssp EEEEEECSSCEEEE--------------------------------------------------------EEE-------
T ss_pred EEEEEeCCCCcCce--------------------------------------------------------EEE-------
Confidence 77666332211000 000
Q ss_pred eEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEc-------------CCCcEEEEEcCCC----------
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI-------------DHGTISRTHRDGT---------- 217 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~-------------~~~~I~~~~~~G~---------- 217 (377)
+..+.... .....+.++++++ +++||+++. ..++|+|++.+|+
T Consensus 124 -~~~~p~~~------------~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 124 -LDGIPARP------------HGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp -EEEECCCT------------TCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred -EEeCCCCC------------CCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 00111000 0112345677777 568998863 2368999999982
Q ss_pred ---CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCE--------EEEEEcCCCe--------------EE-E
Q psy5792 218 ---GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENV--------IEVARLTGQY--------------RY-V 271 (377)
Q Consensus 218 ---~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~--------I~~~~~~g~~--------------~~-~ 271 (377)
..++.. .++..|.+|++|+.+++||++|...+. |.++...+.+ .. .
T Consensus 190 ~~~~~~i~a--------~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 190 RGARPEVYS--------LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TTSCTTEEE--------ECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CCCCccEEE--------EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 334444 367789999999878999999987665 6665543310 11 1
Q ss_pred EeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-------eEEEEecCCCCceEEEEeCCCCEEEEEEe
Q psy5792 272 LISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-------QTILAQEIIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 272 l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-------~~~l~~~~~~~P~glalD~~~~~LYw~d~ 341 (377)
........|.|+++ .+|.+|++++. ..+|.++.+++.. ...++. ....|.++++++ .+.||+++.
T Consensus 262 ~~~~~~~ap~G~~~--~~G~l~v~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~p-dG~lyv~~~ 333 (352)
T 2ism_A 262 YFWPQGFPPGNLAF--FRGDLYVAGLR-GQALLRLVLEGERGRWRVLRVETALS-GFGRLREVQVGP-DGALYVTTS 333 (352)
T ss_dssp EECTTCCCEEEEEE--ETTEEEEEETT-TTEEEEEEEEEETTEEEEEEEEEEEE-SSCCEEEEEECT-TSCEEEEEC
T ss_pred EecCCCCCCcceEE--ECCEEEEEECC-CCEEEEEEECCCCcceeecchheecc-cCCCeeEEEECC-CCcEEEEEe
Confidence 11122346899999 58999999985 6899999988654 233443 367899999996 579999997
No 55
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=3.7e-13 Score=124.31 Aligned_cols=243 Identities=10% Similarity=0.121 Sum_probs=167.7
Q ss_pred CcCCccccccCCCCeEEEE-------eCCCCcEEEEEcCCc-EEEEEe---CCCCCceEEEEE-EC-CeEEEEcCCCCce
Q psy5792 15 FGAVASTLKPQSGPFVYGV-------KTLSHSLHYVNIEVK-VAKVVS---MPDAAQVVAAVF-YK-GRIIYSDANDGNI 81 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~-------d~~~~~I~~~~~dG~-~~~i~~---~~~~~~p~~lav-~~-~~ly~td~~~~~I 81 (377)
+..|.++++| .+++|||+ +...+.|.++++++. .+.+.. ......|.++++ .+ ++||+++... .|
T Consensus 17 ~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l 94 (314)
T 1pjx_A 17 IPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-GL 94 (314)
T ss_dssp CTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-EE
T ss_pred CCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-CE
Confidence 6689999999 45699999 788889999997655 555531 013357999999 44 7899998643 67
Q ss_pred EEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCe
Q psy5792 82 RSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYD 161 (377)
Q Consensus 82 ~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~ 161 (377)
.+++.+|+........
T Consensus 95 ~~~d~~g~~~~~~~~~---------------------------------------------------------------- 110 (314)
T 1pjx_A 95 LVVQTDGTFEEIAKKD---------------------------------------------------------------- 110 (314)
T ss_dssp EEEETTSCEEECCSBC----------------------------------------------------------------
T ss_pred EEEeCCCCEEEEEecc----------------------------------------------------------------
Confidence 7777444321110000
Q ss_pred EEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC---------------CcEEEEEcCCCCcEEEEecc
Q psy5792 162 IMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH---------------GTISRTHRDGTGRENIIEYV 226 (377)
Q Consensus 162 I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~---------------~~I~~~~~~G~~~~~i~~~~ 226 (377)
... .....+.++++|. ++++|+++... +.|++++.+|. .+.+..
T Consensus 111 ------~~~-----------~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~-- 169 (314)
T 1pjx_A 111 ------SEG-----------RRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDT-- 169 (314)
T ss_dssp ------TTS-----------CBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEE--
T ss_pred ------CCC-----------ccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCC-EEEecc--
Confidence 000 0012355666776 56788887654 57888888743 233332
Q ss_pred ccCCCCCCCCcceEEEe----ccCCeEEEEcCCCCEEEEEEcC--CCe--EEEEee--CCC-CCceeEEEcCCCCeEEEE
Q psy5792 227 ETGDPTPVDQFTDIAVD----WIAQNIYWSDPKENVIEVARLT--GQY--RYVLIS--GGV-DQPSALAVDPESGYLFWS 295 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD----~~~~~lYwtd~~~~~I~~~~~~--g~~--~~~l~~--~~~-~~P~~iavdp~~g~lywt 295 (377)
....|.+++++ +.++.||+++...++|.+.+++ |.. ...+.. ... ..|.+|++|+ +|.||++
T Consensus 170 ------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~ 242 (314)
T 1pjx_A 170 ------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVA 242 (314)
T ss_dssp ------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEE
T ss_pred ------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEE
Confidence 45579999999 8766899999988999999876 332 112222 112 5699999997 7899999
Q ss_pred ecCCCCeEEEEecC-CCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 296 ESGKIPLIARAGLD-GKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 296 d~g~~~~I~r~~ld-G~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
+.+ ...|.+.+.+ |.....+... ...|.+++++..+++||+++. ..+.|.+++.+.
T Consensus 243 ~~~-~~~i~~~d~~~g~~~~~~~~~-~~~~~~i~~~~dg~~l~v~~~-~~~~l~~~~~~~ 299 (314)
T 1pjx_A 243 NWG-SSHIEVFGPDGGQPKMRIRCP-FEKPSNLHFKPQTKTIFVTEH-ENNAVWKFEWQR 299 (314)
T ss_dssp EET-TTEEEEECTTCBSCSEEEECS-SSCEEEEEECTTSSEEEEEET-TTTEEEEEECSS
T ss_pred EcC-CCEEEEEcCCCCcEeEEEeCC-CCCceeEEECCCCCEEEEEeC-CCCeEEEEeCCC
Confidence 875 5799999988 6655544332 478999999877677999999 888999998873
No 56
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.60 E-value=1.2e-11 Score=115.56 Aligned_cols=245 Identities=8% Similarity=0.046 Sum_probs=173.9
Q ss_pred CCceEEEEE--ECCeEEEEcCC------CCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCcee
Q psy5792 58 AAQVVAAVF--YKGRIIYSDAN------DGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQ 128 (377)
Q Consensus 58 ~~~p~~lav--~~~~ly~td~~------~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~ 128 (377)
...|.++++ .+++||+++.. .+.|..++ .+++....+.....|.++.+ +++.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-s~dg------------------ 100 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATI-NNTT------------------ 100 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEE-ETTT------------------
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEE-CCCC------------------
Confidence 456888998 45689999976 56899999 66766666554333666665 2322
Q ss_pred ccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCC--------ceEEEEEECCCCEEE
Q psy5792 129 VLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVS--------LAAKVDFHAAEDYIY 200 (377)
Q Consensus 129 ~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~--------~~~~l~~d~~~~~ly 200 (377)
..++++....+.|..+++..... ....+..... .+.++++++.++++|
T Consensus 101 ---------------------~~l~v~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 156 (353)
T 3vgz_A 101 ---------------------QTLWFGNTVNSAVTAIDAKTGEV---KGRLVLDDRKRTEEVRPLQPRELVADDATNTVY 156 (353)
T ss_dssp ---------------------TEEEEEETTTTEEEEEETTTCCE---EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEE
T ss_pred ---------------------CEEEEEecCCCEEEEEeCCCCee---EEEEecCCCccccccCCCCCceEEECCCCCEEE
Confidence 24777776656788888876543 1223332221 378999999999999
Q ss_pred EEEc-CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC----
Q psy5792 201 WVDI-DHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG---- 275 (377)
Q Consensus 201 ~sd~-~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~---- 275 (377)
+++. ..+.|+.+++........+. ..-..|.++++++.++.||+++. .+.|.+.++........+..
T Consensus 157 ~~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~ 228 (353)
T 3vgz_A 157 ISGIGKESVIWVVDGGNIKLKTAIQ-------NTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDG 228 (353)
T ss_dssp EEEESSSCEEEEEETTTTEEEEEEC-------CCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSS
T ss_pred EEecCCCceEEEEcCCCCceEEEec-------CCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCC
Confidence 9985 46789999987543332222 12335999999998888999987 57899999876654433332
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 276 GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 276 ~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
....|.+++++|.+++||+++.+ ...|...++........+. ...|.++++++.+++||+++. ..+.|..++...+
T Consensus 229 ~~~~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 229 KEHFFINISLDTARQRAFITDSK-AAEVLVVDTRNGNILAKVA--APESLAVLFNPARNEAYVTHR-QAGKVSVIDAKSY 304 (353)
T ss_dssp SCCCEEEEEEETTTTEEEEEESS-SSEEEEEETTTCCEEEEEE--CSSCCCEEEETTTTEEEEEET-TTTEEEEEETTTT
T ss_pred CCcccceEEECCCCCEEEEEeCC-CCEEEEEECCCCcEEEEEE--cCCCceEEECCCCCEEEEEEC-CCCeEEEEECCCC
Confidence 23457889999998999999874 5899999986544433333 456789999988889999998 8899999998755
Q ss_pred ce
Q psy5792 356 SK 357 (377)
Q Consensus 356 ~~ 357 (377)
..
T Consensus 305 ~~ 306 (353)
T 3vgz_A 305 KV 306 (353)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 57
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.60 E-value=6.3e-13 Score=126.53 Aligned_cols=252 Identities=13% Similarity=0.171 Sum_probs=168.9
Q ss_pred EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEE-----ecCCC-ceeEEeeecCCCCcccCCCcCC
Q psy5792 49 VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVL-----RNNAG-ISDFILFSVNSGYDIMGIKYNK 121 (377)
Q Consensus 49 ~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~-----~~~~~-p~~i~v~~~~~~~~~~~~~C~~ 121 (377)
.+++. ..+..|++|++ .+++||+++.. ++|++++.+|+ ..+. ..... |.||++ +++-.
T Consensus 21 ~~~va--~~l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~-~pdf~---------- 85 (354)
T 3a9g_A 21 ISEVA--SDLEVPWSIAPLGGGRYLVTERP-GRLVLISPSGK-KLVASFDVANVGEAGLLGLAL-HPEFP---------- 85 (354)
T ss_dssp EEEEE--CSCSCEEEEEEEETTEEEEEETT-TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEE-CTTTT----------
T ss_pred EEEEe--CCCCCCeEEEEcCCCeEEEEeCC-CEEEEEeCCCc-eEeeccceeecCCCceeeEEe-CCCCC----------
Confidence 56665 67899999999 67899999987 89999987776 3322 12223 888886 44310
Q ss_pred CCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC---C----CeEEEEEcCCCCcee--eEEE---EecCCCCceEE
Q psy5792 122 NESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS---G----YDIMGIKYNKNESKV--TQVL---GPLSKVSLAAK 189 (377)
Q Consensus 122 ~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~---~----~~I~~~~l~~~~~~~--~~~~---~~~~~~~~~~~ 189 (377)
.+..|+++... . ..|.++++++....+ .+.+ .+......+.+
T Consensus 86 --------------------------~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~ 139 (354)
T 3a9g_A 86 --------------------------KKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGR 139 (354)
T ss_dssp --------------------------TSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCC
T ss_pred --------------------------cCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCce
Confidence 01246555431 1 348899887652111 1122 23223345778
Q ss_pred EEEECCCCEEEEEEcC-------------CCcEEEEEcCCC--------CcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 190 VDFHAAEDYIYWVDID-------------HGTISRTHRDGT--------GRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 190 l~~d~~~~~ly~sd~~-------------~~~I~~~~~~G~--------~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
|++++ +++||++.-. .++|+|++.+|+ ..++.. .++..|.+|++|+.+++
T Consensus 140 l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a--------~G~rnp~Gla~d~~~g~ 210 (354)
T 3a9g_A 140 IRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWS--------YGHRNPQGIDWHRASGV 210 (354)
T ss_dssp EEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEE--------ECCSCCCEEEECTTTCC
T ss_pred EEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE--------EccCCcceEEEeCCCCC
Confidence 99998 6689999632 368999999987 334444 47888999999987899
Q ss_pred EEEEcCCCC---EEEEEEcCCCe--------------EEEEee--CCCCCceeEEE-------cCCCCeEEEEecCCCCe
Q psy5792 249 IYWSDPKEN---VIEVARLTGQY--------------RYVLIS--GGVDQPSALAV-------DPESGYLFWSESGKIPL 302 (377)
Q Consensus 249 lYwtd~~~~---~I~~~~~~g~~--------------~~~l~~--~~~~~P~~iav-------dp~~g~lywtd~g~~~~ 302 (377)
||++|...+ .|.++...+.+ ...+.. .....|.|+++ + .+|.+|+++.. ..+
T Consensus 211 l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~-~~G~l~v~~~~-~~~ 288 (354)
T 3a9g_A 211 MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG-LRGWLLIACLR-GSM 288 (354)
T ss_dssp EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG-GTTEEEEEETT-TTE
T ss_pred EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc-cCCcEEEEEcC-CCE
Confidence 999998764 46665543310 111111 12356999999 4 57899999985 689
Q ss_pred EEEEecCCCCe----EEEEecCCCCceEEEEeCCCCEEEEEEeCC-CC---------eEEEEEccC
Q psy5792 303 IARAGLDGKKQ----TILAQEIIMPIKDITLDRKNKRVYWCYSVG-SN---------VLESMDYSG 354 (377)
Q Consensus 303 I~r~~ldG~~~----~~l~~~~~~~P~glalD~~~~~LYw~d~~~-~~---------~i~~~~~~G 354 (377)
|.++.+++... ..++......|.++++++ .+.||+++. . .+ +|+++...|
T Consensus 289 v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p-DG~lyv~~~-~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 289 LAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDD-DGGILISTS-NRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp EEEEEECGGGCEEEEEEECTTTSCCEEEEEECT-TSCEEEEEC-TTSSSSCCCTTCSCEEEEEETT
T ss_pred EEEEEECCCCcccceeeeccCCCCCeeEEEECC-CCcEEEEEe-CCCCCcCCCCCCCEEEEEecCC
Confidence 99999986431 233333356899999986 568999986 4 33 888887764
No 58
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.59 E-value=4.3e-13 Score=125.48 Aligned_cols=166 Identities=14% Similarity=0.170 Sum_probs=122.5
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC---------
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK--------- 255 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~--------- 255 (377)
..|.++++|..++.||++|.. +.|.++++++...+.+...... ..+..|.+|++|+..++||++|..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~---~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDG---VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESEETT---EECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCC---CcccccceEEEecCCCEEEEECCcccccccccc
Confidence 358899999767899999975 4588888875444554421000 124569999999646799999865
Q ss_pred --------CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC---CeEEEEecCCCCc
Q psy5792 256 --------ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK---KQTILAQEIIMPI 324 (377)
Q Consensus 256 --------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~---~~~~l~~~~~~~P 324 (377)
.++|.+.+.++...+.+.. .+..|.+|+++|....||++|.+ ..+|.+.++++. ..+.+... .. |
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~-~~~I~~~~~~~~~~~~~~~~~~~-~g-P 231 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFL-SHQIVKYWLEGPKKGTAEVLVKI-PN-P 231 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGG-GTEEEEEESSSTTTTCEEEEEEC-SS-E
T ss_pred eehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCC-CCeEEEEECCCCcCCccceEEeC-CC-C
Confidence 2689999998766555544 47889999999977789999985 689999999873 33444432 23 9
Q ss_pred eEEEEeCCCCEEEEEEeCC----------CCeEEEEEccCCceEEE
Q psy5792 325 KDITLDRKNKRVYWCYSVG----------SNVLESMDYSGGSKMQL 360 (377)
Q Consensus 325 ~glalD~~~~~LYw~d~~~----------~~~i~~~~~~G~~~~~~ 360 (377)
.||++|. +++||+++. . .++|.+++.+|.-.+.+
T Consensus 232 ~gi~~d~-~G~l~va~~-~~~~~~~~~~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 232 GNIKRNA-DGHFWVSSS-EELDGNMHGRVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp EEEEECT-TSCEEEEEE-EETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred CCeEECC-CCCEEEEec-CcccccccCCCccEEEEECCCCCEEEEE
Confidence 9999996 567999998 6 57899999986544444
No 59
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.56 E-value=2.5e-12 Score=119.33 Aligned_cols=230 Identities=13% Similarity=0.087 Sum_probs=159.5
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCcEEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEE
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVKVAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTV 93 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~ 93 (377)
+..+.|.+.++++++|||++...+.|.+.+.+|..+++. .....|.++++ .+++||+++...+.|.+++.+|+....
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~--~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~ 121 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLL--DATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLL 121 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEE--ESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEe--CCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEE
Confidence 457889999998888999999999999999987744443 34567999999 577899999888899999977764333
Q ss_pred EecCC-----CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeC-----------
Q psy5792 94 LRNNA-----GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVN----------- 157 (377)
Q Consensus 94 ~~~~~-----~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~----------- 157 (377)
..... .|.++.+. ++ ..+++++.
T Consensus 122 ~~~~~~~~~~~~~~i~~d-~d----------------------------------------G~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVA-RD----------------------------------------GAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp ECEETTEECSCCCCEEEC-TT----------------------------------------SCEEEECCSGGGSCGGGSC
T ss_pred EeccCCCccCCCCCEEEC-CC----------------------------------------CCEEEeCcCCCcccccccc
Confidence 22110 13344431 11 12444321
Q ss_pred ------CCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC-----CcEEEEEcCCCC---cEEEE
Q psy5792 158 ------SGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH-----GTISRTHRDGTG---RENII 223 (377)
Q Consensus 158 ------~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~-----~~I~~~~~~G~~---~~~i~ 223 (377)
..+.|.+++.+.... ..+. ....|.++++++.++.||+++... +.|+++++++.. .+.+.
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~---~~~~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPL---QRMA---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCC---EEEE---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred ccccccCCCeEEEEcCCCCcE---EEEe---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 112377777654433 1221 456789999999888999999763 789999887532 22333
Q ss_pred eccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5792 224 EYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 303 (377)
Q Consensus 224 ~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I 303 (377)
. .....|.+|++|. .++||++. .+.|.+.+++|+....+... ..|..+++.+..+.||++.. ..|
T Consensus 235 ~-------~~~~~pdgi~~d~-~G~lwv~~--~~gv~~~~~~g~~~~~~~~~--~~~~~~~f~~d~~~L~it~~---~~l 299 (305)
T 3dr2_A 235 S-------VPDGLPDGFCVDR-GGWLWSSS--GTGVCVFDSDGQLLGHIPTP--GTASNCTFDQAQQRLFITGG---PCL 299 (305)
T ss_dssp C-------CSSSCCCSEEECT-TSCEEECC--SSEEEEECTTSCEEEEEECS--SCCCEEEECTTSCEEEEEET---TEE
T ss_pred E-------CCCCCCCeEEECC-CCCEEEec--CCcEEEECCCCCEEEEEECC--CceeEEEEeCCCCEEEEEcC---CeE
Confidence 3 2345699999995 67788877 34699999999876655433 25999999987788999874 478
Q ss_pred EEEec
Q psy5792 304 ARAGL 308 (377)
Q Consensus 304 ~r~~l 308 (377)
++.++
T Consensus 300 ~~~~~ 304 (305)
T 3dr2_A 300 WMLPL 304 (305)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 77754
No 60
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.55 E-value=4e-11 Score=111.29 Aligned_cols=277 Identities=10% Similarity=0.067 Sum_probs=180.5
Q ss_pred CCeEEEEeCCCCcEEEEEcC--CcEEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcC---CCCceEE--EecC
Q psy5792 27 GPFVYGVKTLSHSLHYVNIE--VKVAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINL---DGSNSTV--LRNN 97 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~d--G~~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~---~g~~~~~--~~~~ 97 (377)
++.||+++...+.|...+++ |..+.+........|.++++ .+.+||+++...+.|...+. +|+...+ +...
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 45789998888999999986 54222211144567888998 56679999987788887662 3443222 2211
Q ss_pred CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEE
Q psy5792 98 AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQV 177 (377)
Q Consensus 98 ~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~ 177 (377)
..|.++++ +++. .+++++....+.|..++++.... ...
T Consensus 84 ~~~~~~~~-s~dg---------------------------------------~~l~~~~~~~~~i~~~d~~~~~~--~~~ 121 (343)
T 1ri6_A 84 GSLTHIST-DHQG---------------------------------------QFVFVGSYNAGNVSVTRLEDGLP--VGV 121 (343)
T ss_dssp SCCSEEEE-CTTS---------------------------------------SEEEEEETTTTEEEEEEEETTEE--EEE
T ss_pred CCCcEEEE-cCCC---------------------------------------CEEEEEecCCCeEEEEECCCCcc--ccc
Confidence 12555543 2222 25667766555688887741111 123
Q ss_pred EEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC-CCcEEE----EeccccCCCCCCCCcceEEEeccCCeEEEE
Q psy5792 178 LGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG-TGRENI----IEYVETGDPTPVDQFTDIAVDWIAQNIYWS 252 (377)
Q Consensus 178 ~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G-~~~~~i----~~~~~~~~~~~~~~p~~iavD~~~~~lYwt 252 (377)
+..+.....+.++++++.++.||+++...+.|..++++. .....+ ... ..-..|.++++++.++.||++
T Consensus 122 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 122 VDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT------VEGAGPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp EEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC------STTCCEEEEEECTTSSEEEEE
T ss_pred cccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc------CCCCCcceEEECCCCCEEEEE
Confidence 333445566889999998889999997788999988864 222221 110 122468999999888889999
Q ss_pred cCCCCEEEEEEcCC---Ce--EEEEee--C---CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC--CCCeEEEEe-c
Q psy5792 253 DPKENVIEVARLTG---QY--RYVLIS--G---GVDQPSALAVDPESGYLFWSESGKIPLIARAGLD--GKKQTILAQ-E 319 (377)
Q Consensus 253 d~~~~~I~~~~~~g---~~--~~~l~~--~---~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld--G~~~~~l~~-~ 319 (377)
+...++|.+.+++. .. ...+.. . ....|.+++++|...+||++..+ ...|...+++ +...+.+.. .
T Consensus 196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 196 NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-ASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-TTEEEEEEECTTSCCEEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-CCEEEEEEEcCCCCceEEeeeec
Confidence 98889999999864 22 112211 1 13457789999988899999864 5778888776 433333321 1
Q ss_pred CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 320 IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 320 ~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.-..|.++++++.+++||.+.. ..+.|...+++
T Consensus 275 ~~~~~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d 307 (343)
T 1ri6_A 275 TETQPRGFNVDHSGKYLIAAGQ-KSHHISVYEIV 307 (343)
T ss_dssp CSSSCCCEEECTTSSEEEEECT-TTCEEEEEEEE
T ss_pred CCCccceEEECCCCCEEEEecC-CCCeEEEEEEc
Confidence 1245999999988889999997 77777666444
No 61
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=2.8e-12 Score=118.56 Aligned_cols=225 Identities=10% Similarity=0.088 Sum_probs=155.8
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcC-CCCce
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINL-DGSNS 91 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~-~g~~~ 91 (377)
...+.|.+.|+.+++|||+|...++|+++++++. .+.+. ....|.++++ .++.+|++. .+.|.+++. +|+..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT---MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE---CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe---CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 4577888999988999999999999999999988 65553 3457899999 466788876 468999994 45433
Q ss_pred EEEecCC----C-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe----------
Q psy5792 92 TVLRNNA----G-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV---------- 156 (377)
Q Consensus 92 ~~~~~~~----~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~---------- 156 (377)
.+..... . |.++++ +++ ..++++.
T Consensus 87 ~~~~~~~~~~~~~~~di~~-d~d----------------------------------------G~l~~~~~~~~~~~~~~ 125 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKV-DPA----------------------------------------GRYFAGTMAEETAPAVL 125 (297)
T ss_dssp EEEECCTTCSSEEEEEEEE-CTT----------------------------------------SCEEEEEEECCSBTTBC
T ss_pred EEEecCCCCCCCCCCCEEE-CCC----------------------------------------CCEEEecCCcccccccc
Confidence 3322111 1 444444 221 1244443
Q ss_pred -CCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC---CC--CcEEEEeccccCC
Q psy5792 157 -NSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD---GT--GRENIIEYVETGD 230 (377)
Q Consensus 157 -~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~---G~--~~~~i~~~~~~~~ 230 (377)
...+.|.+++.++.. ..+ ......|.++++++.++.|||++...++|++++++ |. ..+.+...
T Consensus 126 ~~~~~~l~~~d~~g~~----~~~--~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~----- 194 (297)
T 3g4e_A 126 ERHQGALYSLFPDHHV----KKY--FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL----- 194 (297)
T ss_dssp CTTCEEEEEECTTSCE----EEE--EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC-----
T ss_pred cCCCcEEEEEECCCCE----EEE--eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC-----
Confidence 122347777665431 111 23456789999999888999999988999999874 32 12333320
Q ss_pred CCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC-CCeEEEEeeCCCCCceeEEEc-CCCCeEEEEecC
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT-GQYRYVLISGGVDQPSALAVD-PESGYLFWSESG 298 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~-g~~~~~l~~~~~~~P~~iavd-p~~g~lywtd~g 298 (377)
......|.+|++|. .++||+++...++|.+.+++ |+....+ ......|.++++. |..+.||+|...
T Consensus 195 ~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i-~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 195 EKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTV-KLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp CGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEE-ECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEE-ECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 01224699999996 57999999888999999998 7765544 3345679999998 777899999853
No 62
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=8.1e-12 Score=115.81 Aligned_cols=240 Identities=15% Similarity=0.178 Sum_probs=164.0
Q ss_pred CCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcCCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCC
Q psy5792 46 EVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINLDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNK 121 (377)
Q Consensus 46 dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~ 121 (377)
.+. .+++. .....+.|.++ .+++|||+|..++.|++++.+|+. +++..... |.++++ +++.
T Consensus 33 ~~~~~~~l~--~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~-~~~~~~~~~~~gl~~-d~dG----------- 97 (305)
T 3dr2_A 33 GDARLLTLY--DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV-DVLLDATAFTNGNAV-DAQQ----------- 97 (305)
T ss_dssp TTCCCEEEE--CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE-EEEEESCSCEEEEEE-CTTS-----------
T ss_pred CCCceEEEe--cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE-EEEeCCCCccceeeE-CCCC-----------
Confidence 455 77776 67888999998 345799999999999999976653 34433333 777765 2222
Q ss_pred CCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEe-cC--CCCceEEEEEECCCCE
Q psy5792 122 NESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGP-LS--KVSLAAKVDFHAAEDY 198 (377)
Q Consensus 122 ~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~-~~--~~~~~~~l~~d~~~~~ 198 (377)
.|+++....+.|.+++.++. . ..+.. .. ....|..+++|. ++.
T Consensus 98 -----------------------------~l~v~~~~~~~v~~~~~~g~-~---~~~~~~~~~~~~~~~~~i~~d~-dG~ 143 (305)
T 3dr2_A 98 -----------------------------RLVHCEHGRRAITRSDADGQ-A---HLLVGRYAGKRLNSPNDLIVAR-DGA 143 (305)
T ss_dssp -----------------------------CEEEEETTTTEEEEECTTSC-E---EEEECEETTEECSCCCCEEECT-TSC
T ss_pred -----------------------------CEEEEECCCCEEEEECCCCC-E---EEEEeccCCCccCCCCCEEECC-CCC
Confidence 25566544335888877643 2 12211 11 123467788997 678
Q ss_pred EEEEEcC-----------------CCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC-----
Q psy5792 199 IYWVDID-----------------HGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE----- 256 (377)
Q Consensus 199 ly~sd~~-----------------~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~----- 256 (377)
||++|.. .+.|++++.++...+.+.. +..|.+|++++.++.||+++...
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~---------~~~p~gl~~spdg~~lyv~~~~~~~~~~ 214 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD---------LDHPNGLAFSPDEQTLYVSQTPEQGHGS 214 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE---------ESSEEEEEECTTSSEEEEEECCC---CC
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec---------CCCCcceEEcCCCCEEEEEecCCcCCCC
Confidence 9998741 3579999885433333322 34699999998878899999873
Q ss_pred CEEEEEEcCCCe---EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCC
Q psy5792 257 NVIEVARLTGQY---RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKN 333 (377)
Q Consensus 257 ~~I~~~~~~g~~---~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~ 333 (377)
++|.+.++++.. .+++.......|.+|++|+ .|.||++.. ..|.+.+.+|.....+... ..|..++++...
T Consensus 215 ~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~~---~gv~~~~~~g~~~~~~~~~--~~~~~~~f~~d~ 288 (305)
T 3dr2_A 215 VEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSSG---TGVCVFDSDGQLLGHIPTP--GTASNCTFDQAQ 288 (305)
T ss_dssp CEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECCS---SEEEEECTTSCEEEEEECS--SCCCEEEECTTS
T ss_pred CEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEecC---CcEEEECCCCCEEEEEECC--CceeEEEEeCCC
Confidence 799999987643 3344443456799999997 677888873 4699999988766665543 268899998666
Q ss_pred CEEEEEEeCCCCeEEEEEc
Q psy5792 334 KRVYWCYSVGSNVLESMDY 352 (377)
Q Consensus 334 ~~LYw~d~~~~~~i~~~~~ 352 (377)
++||++.. +.++++++
T Consensus 289 ~~L~it~~---~~l~~~~~ 304 (305)
T 3dr2_A 289 QRLFITGG---PCLWMLPL 304 (305)
T ss_dssp CEEEEEET---TEEEEEEC
T ss_pred CEEEEEcC---CeEEEEEC
Confidence 78888766 46777654
No 63
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.54 E-value=1e-10 Score=112.82 Aligned_cols=283 Identities=13% Similarity=0.057 Sum_probs=203.1
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeC----CCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSM----PDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~----~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~ 87 (377)
...|.++++++ ++++|++....+.|...|+++. ....... .....+.++++ .++.+|++....+.|...+ .+
T Consensus 122 ~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 122 GFQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SSCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 35678899998 7899999888889999999866 4443211 22335677888 6789999998889999999 56
Q ss_pred CCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 88 GSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 88 g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
++....+..... +.++++ +++. ..++++....+.|+.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-~~~~---------------------------------------~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLY-DPIR---------------------------------------DLVYCSNWISEDISVID 240 (433)
T ss_dssp CCEEEEEECSSSSEEEEEE-ETTT---------------------------------------TEEEEEETTTTEEEEEE
T ss_pred ceEEEEEcCCCCCeeEEEE-cCCC---------------------------------------CEEEEEecCCCcEEEEE
Confidence 666555553333 666654 3322 24666765556799998
Q ss_pred cCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEc-------CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcce
Q psy5792 167 YNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI-------DHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTD 239 (377)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~-------~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~ 239 (377)
+.... .+..+.....+.++++++.++.|+.+.. ..+.|+..++.......... ....|.+
T Consensus 241 ~~~~~-----~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~~~~ 307 (433)
T 3bws_A 241 RKTKL-----EIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--------PPGNKRH 307 (433)
T ss_dssp TTTTE-----EEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--------EEECEEE
T ss_pred CCCCc-----EEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--------CCCCcce
Confidence 87542 2333444556899999998889998875 35688899987543322222 1236889
Q ss_pred EEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCC-------------CeEEEE
Q psy5792 240 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKI-------------PLIARA 306 (377)
Q Consensus 240 iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~-------------~~I~r~ 306 (377)
+++++.++.||++....++|.+.+++.......+. ....|.+++++|...+||.+..+.. +.|+..
T Consensus 308 ~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 308 IVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 99998777899998888999999998765544444 3567999999998888999886421 389999
Q ss_pred ecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 307 GLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 307 ~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
++........+.. -..|.++++++.++.||.+.. ..+.|...++++
T Consensus 387 d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-~d~~i~v~~~~~ 432 (433)
T 3bws_A 387 DTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF-LDHQIRVYRRDG 432 (433)
T ss_dssp ETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET-TTTEEEEEEETT
T ss_pred ECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC-CCCeEEEEEecC
Confidence 8865444444443 467999999988889998887 788888877763
No 64
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.53 E-value=1.5e-11 Score=111.12 Aligned_cols=212 Identities=9% Similarity=0.103 Sum_probs=147.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc--CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN--LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~--~~g~~~ 91 (377)
+.+.|++.|+++++||.+....+.|..+|++|. .+++- ..+..++.||++ .++.+++++-..+++..++ .+++ .
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~-l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~-i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP-LDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE-V 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE-CSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC-E
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe-cCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe-e
Confidence 579999999999999998888999999999999 77663 356689999999 5667778887778887776 2221 1
Q ss_pred EEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 92 TVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 92 ~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
.+ +..+.+.-..
T Consensus 105 ~~--------------------------------------------------------------------~~~~~~~~~~ 116 (255)
T 3qqz_A 105 KI--------------------------------------------------------------------LKKIKIPLQE 116 (255)
T ss_dssp EE--------------------------------------------------------------------EEEEECCCSS
T ss_pred ee--------------------------------------------------------------------eeeecccccc
Confidence 11 1111111000
Q ss_pred ceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCC-cEEEEE--cCCCCcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 172 SKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHG-TISRTH--RDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~-~I~~~~--~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
........|+++|+.+++||.+..... .|+.++ +.+... .+...........+..+.+|++|+.+++
T Consensus 117 ---------~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l-~i~~~~~~~~~~~~~d~S~l~~dp~tg~ 186 (255)
T 3qqz_A 117 ---------SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNEL-HISKDKALQRQFTLDDVSGAEFNQQKNT 186 (255)
T ss_dssp ---------CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCC-EEEECHHHHHTCCSSCCCEEEEETTTTE
T ss_pred ---------ccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCce-eeecchhhccccccCCceeEEEcCCCCe
Confidence 011223689999999999999876554 788887 122122 2222100001123557999999999999
Q ss_pred EEEEcCCCCEEEEEEcCCCeEEEEeeC--------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 249 IYWSDPKENVIEVARLTGQYRYVLISG--------GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 249 lYwtd~~~~~I~~~~~~g~~~~~l~~~--------~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
||+.....+++..++++|..+..+--. .+.+|.|||+|+ +|.||++.. ...++++.-++
T Consensus 187 lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE--~n~~y~f~~~~ 253 (255)
T 3qqz_A 187 LLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSE--PNRFYRFTPQS 253 (255)
T ss_dssp EEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEET--TTEEEEEEC--
T ss_pred EEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcC--CceEEEEEecC
Confidence 999999999999999999865544222 257999999998 689999975 35888886544
No 65
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=4.2e-11 Score=113.05 Aligned_cols=257 Identities=12% Similarity=0.127 Sum_probs=168.3
Q ss_pred CcCCccccccCCCCeEEEEeC---CCCcEEEE--EcC-CcEEEEEe-CCCCCceEEEEEECCeEEEEcCCCCceEEEcC-
Q psy5792 15 FGAVASTLKPQSGPFVYGVKT---LSHSLHYV--NIE-VKVAKVVS-MPDAAQVVAAVFYKGRIIYSDANDGNIRSINL- 86 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~---~~~~I~~~--~~d-G~~~~i~~-~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~- 86 (377)
...|.++++++++++||.+.. ..+.|... +.+ |..+.+.. ......|..+++.+++||+++...+.|..++.
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeC
Confidence 468999999999999999988 35677654 555 43433321 13456899999977789999988888877772
Q ss_pred -CCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 87 -DGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 87 -~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
+|....+ ...+
T Consensus 129 ~~g~~~~~--------------------------------------------------------------------~~~~ 140 (361)
T 3scy_A 129 QDGALLPA--------------------------------------------------------------------SDVI 140 (361)
T ss_dssp TTSCBCSC--------------------------------------------------------------------SEEE
T ss_pred CCCcCccc--------------------------------------------------------------------ceeE
Confidence 2211000 0000
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc-------------EEEEeccccCCCC
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR-------------ENIIEYVETGDPT 232 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~-------------~~i~~~~~~~~~~ 232 (377)
...+... . ..-....++.++++++.+++||+++...+.|...+++.... ..... .
T Consensus 141 ~~~g~~~--~---~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-------~ 208 (361)
T 3scy_A 141 EFKGSGP--D---KERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-------A 208 (361)
T ss_dssp ECCCCCS--C---TTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-------C
T ss_pred EccCCCC--C---ccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-------C
Confidence 0011000 0 00012235788899998889999998888888887764321 11222 2
Q ss_pred CCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEe--e---CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5792 233 PVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLI--S---GGVDQPSALAVDPESGYLFWSESGKIPLIARAG 307 (377)
Q Consensus 233 ~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~--~---~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ 307 (377)
.-..|.++++++.++.||+++...++|.+.+++....+.+. . .....|.+|+++|...+||+++.+....|...+
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 33469999999988889999988899999998754432221 1 124568899999988899999874135676666
Q ss_pred cC--CCCeEEE--EecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 308 LD--GKKQTIL--AQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 308 ld--G~~~~~l--~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
++ ....+.+ +.. -..|.++++++.+++||.+.. ..+.|....++
T Consensus 289 ~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~-~~~~v~v~~~d 336 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR-DTNVIQIFERD 336 (361)
T ss_dssp ECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET-TTTEEEEEEEC
T ss_pred EcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC-CCCCEEEEEEE
Confidence 65 2222222 122 247999999988889999998 77877774444
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.50 E-value=7.9e-11 Score=109.25 Aligned_cols=279 Identities=13% Similarity=0.052 Sum_probs=173.3
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcC--Cc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcC-CC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIE--VK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINL-DG 88 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~d--G~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~-~g 88 (377)
...|.++++++.+++||++....+.|...+++ +. .+.+........|.++++ .+.+||+++...+.|..++. +|
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 35799999999999999999887899988776 44 433321122337899999 45579999988888888883 44
Q ss_pred CceEEEe---cCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 89 SNSTVLR---NNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 89 ~~~~~~~---~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
...+.+. ....|.++.+ +++ ..+++++....+.|..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~-s~d---------------------------------------g~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANI-SPD---------------------------------------NRTLWVPALKQDRICLF 156 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEE-CTT---------------------------------------SSEEEEEEGGGTEEEEE
T ss_pred ccccccccccCCCCceEEEE-CCC---------------------------------------CCEEEEecCCCCEEEEE
Confidence 3322221 1111333332 121 12566666444568888
Q ss_pred EcCCCCceeeEE---EEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC--CCcEEEEecc-ccCCCCCCCCcce
Q psy5792 166 KYNKNESKVTQV---LGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG--TGRENIIEYV-ETGDPTPVDQFTD 239 (377)
Q Consensus 166 ~l~~~~~~~~~~---~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G--~~~~~i~~~~-~~~~~~~~~~p~~ 239 (377)
++..... .... .........+.++++++.++.||+++...+.|..++++. ...+.+.... ..........|.+
T Consensus 157 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 157 TVSDDGH-LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp EECTTSC-EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred EecCCCc-eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 8875222 0111 223334457889999998889999998888999999863 2221111100 0000011335778
Q ss_pred EEEeccCCeEEEEcCCCCEEEEEEcC--CCeEEEE--eeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE--ecCCCCe
Q psy5792 240 IAVDWIAQNIYWSDPKENVIEVARLT--GQYRYVL--ISGGVDQPSALAVDPESGYLFWSESGKIPLIARA--GLDGKKQ 313 (377)
Q Consensus 240 iavD~~~~~lYwtd~~~~~I~~~~~~--g~~~~~l--~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~--~ldG~~~ 313 (377)
+++++.++.||+++...+.|.+.+++ +...+.+ +... ..|.+++++|...+||++... ...|... +.+....
T Consensus 236 i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~-~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQK-SHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTT-TCEEEEEEEETTTTEE
T ss_pred eEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCC-CCeEEEEEEcCCCcee
Confidence 99998888999999888999999987 3322222 2322 349999999988889999854 3555555 4433323
Q ss_pred EEEEecC-CCCceEEEEeCCCCEE
Q psy5792 314 TILAQEI-IMPIKDITLDRKNKRV 336 (377)
Q Consensus 314 ~~l~~~~-~~~P~glalD~~~~~L 336 (377)
+.+..-. -..|.+++++...+++
T Consensus 314 ~~~~~~~~g~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 314 HEKGRYAVGQGPMWVVVNAHEGGS 337 (343)
T ss_dssp EEEEEEECSSSCCEEEEEEEC---
T ss_pred eEccccccCCCCeeEEEEcccCCc
Confidence 3332211 2679999998765543
No 67
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.49 E-value=4.8e-11 Score=111.27 Aligned_cols=248 Identities=13% Similarity=0.094 Sum_probs=164.1
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCC----CceEEEcCCC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDAND----GNIRSINLDG 88 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~----~~I~~~~~~g 88 (377)
+..|.++++|+. ++|||++...+.|.++++++. .+.+.. .....|.+|++ .++++|+++... +.|.+++.++
T Consensus 44 ~~~~~~~~~~~~-g~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 44 GLQLEGLNFDRQ-GQLFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CCCEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CccccCcEECCC-CCEEEEECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 356889999965 569999999999999999877 555531 34567999999 577899998766 6899999555
Q ss_pred CceE-EEecC--C-CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC------
Q psy5792 89 SNST-VLRNN--A-GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS------ 158 (377)
Q Consensus 89 ~~~~-~~~~~--~-~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~------ 158 (377)
.... ++... . .|.++.+ +++. .++++...
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~-d~~g----------------------------------------~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVF-DSKG----------------------------------------GFYFTDFRGYSTNP 160 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEE-CTTS----------------------------------------CEEEEECCCBTTBC
T ss_pred CEEEEEEccCccCCcccceEE-CCCC----------------------------------------CEEEEeccccccCC
Confidence 4433 43311 1 1555554 2221 25555432
Q ss_pred CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC--CCCcEEEEeccccCCCCCCCC
Q psy5792 159 GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD--GTGRENIIEYVETGDPTPVDQ 236 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~--G~~~~~i~~~~~~~~~~~~~~ 236 (377)
.+.|.+++.++... ..+. .....+.++++++.++.||+++...+.|++++++ |.....+....... ..+...
T Consensus 161 ~~~l~~~~~~~~~~---~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~-~~~~~~ 234 (333)
T 2dg1_A 161 LGGVYYVSPDFRTV---TPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY-FTGHEG 234 (333)
T ss_dssp CEEEEEECTTSCCE---EEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE-CCSSSE
T ss_pred CceEEEEeCCCCEE---EEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEe-cCCCCC
Confidence 23477777665433 1111 2334688999998778899999888899999984 43322211000000 012246
Q ss_pred cceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCC-----CCCceeEEEcCCCCeEEEEecCC----CCeEEEEe
Q psy5792 237 FTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG-----VDQPSALAVDPESGYLFWSESGK----IPLIARAG 307 (377)
Q Consensus 237 p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~-----~~~P~~iavdp~~g~lywtd~g~----~~~I~r~~ 307 (377)
|.+|++|. .++||+++...++|.+.+++|+....+-... +..|.+++++|..+.||++.... ...|++++
T Consensus 235 ~~~i~~d~-~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 235 PDSCCIDS-DDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp EEEEEEBT-TCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEE
T ss_pred CCceEECC-CCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEe
Confidence 99999996 5789999888889999999887655553221 12699999998767999987531 24677777
Q ss_pred cCCCC
Q psy5792 308 LDGKK 312 (377)
Q Consensus 308 ldG~~ 312 (377)
.+..+
T Consensus 314 ~~~~g 318 (333)
T 2dg1_A 314 GFAKG 318 (333)
T ss_dssp CSSCB
T ss_pred cccCc
Confidence 66443
No 68
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.49 E-value=3.6e-12 Score=121.26 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=161.4
Q ss_pred CCc-EEEEEeCCCCCceEEEEE-ECCe-EEEEcCCCCceEEEcCCCCceEEE-------ecCCC-ceeEEeeecCCCCcc
Q psy5792 46 EVK-VAKVVSMPDAAQVVAAVF-YKGR-IIYSDANDGNIRSINLDGSNSTVL-------RNNAG-ISDFILFSVNSGYDI 114 (377)
Q Consensus 46 dG~-~~~i~~~~~~~~p~~lav-~~~~-ly~td~~~~~I~~~~~~g~~~~~~-------~~~~~-p~~i~v~~~~~~~~~ 114 (377)
+|- .+++. ..+.+|++|++ -+++ ||+++.. ++|++++.+|...+.+ ..... +.+|++ +|+-.
T Consensus 6 ~g~~~~~va--~~l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~-~pdf~--- 78 (353)
T 2g8s_A 6 ATVNVEVLQ--DKLDHPWALAFLPDNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVL-APDFA--- 78 (353)
T ss_dssp CCSEEEEEE--EEESSEEEEEECSTTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEE-CTTHH---
T ss_pred CCcEEEEEE--CCCCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEE-CCCCC---
Confidence 454 56665 57889999999 5667 9999974 7899998666432211 11222 666665 33200
Q ss_pred cCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC-------CCeEEEEEcCCCCcee--eEEEEe-cC--
Q psy5792 115 MGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS-------GYDIMGIKYNKNESKV--TQVLGP-LS-- 182 (377)
Q Consensus 115 ~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~-------~~~I~~~~l~~~~~~~--~~~~~~-~~-- 182 (377)
.+..|+++... ...|.++.+++...++ .+.++. +.
T Consensus 79 ---------------------------------~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~ 125 (353)
T 2g8s_A 79 ---------------------------------QSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKL 125 (353)
T ss_dssp ---------------------------------HHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCC
T ss_pred ---------------------------------CCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCC
Confidence 01235554321 1248888876542211 122221 11
Q ss_pred --CCCceEEEEEECCCCEEEEEEcC-------------CCcEEEEEcCCC-------------CcEEEEeccccCCCCCC
Q psy5792 183 --KVSLAAKVDFHAAEDYIYWVDID-------------HGTISRTHRDGT-------------GRENIIEYVETGDPTPV 234 (377)
Q Consensus 183 --~~~~~~~l~~d~~~~~ly~sd~~-------------~~~I~~~~~~G~-------------~~~~i~~~~~~~~~~~~ 234 (377)
....+.+|++++ +++||++.-. .++|+|++.+|+ ..++.. .++
T Consensus 126 ~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a--------~G~ 196 (353)
T 2g8s_A 126 STGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS--------YGI 196 (353)
T ss_dssp BSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE--------ECC
T ss_pred CCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE--------EcC
Confidence 223467899998 6799999632 368999999987 334443 377
Q ss_pred CCcceEEEeccCCeEEEEcCCCC---EEEEEEcCCCe---------------------------E-EEEeeCCCCCceeE
Q psy5792 235 DQFTDIAVDWIAQNIYWSDPKEN---VIEVARLTGQY---------------------------R-YVLISGGVDQPSAL 283 (377)
Q Consensus 235 ~~p~~iavD~~~~~lYwtd~~~~---~I~~~~~~g~~---------------------------~-~~l~~~~~~~P~~i 283 (377)
..|.+|++|+.++.||++|.... .|.++...+.+ . ..........|.++
T Consensus 197 rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~ 276 (353)
T 2g8s_A 197 RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGM 276 (353)
T ss_dssp SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEE
T ss_pred cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCccee
Confidence 78999999987899999988643 55554332221 0 00111112368899
Q ss_pred EEcC------CCCeEEEEecCCCCeEEEEecCCCCe---EEEEecCCCCceEEEEeCCCCEEEEE-EeCCCCeEEEEEc
Q psy5792 284 AVDP------ESGYLFWSESGKIPLIARAGLDGKKQ---TILAQEIIMPIKDITLDRKNKRVYWC-YSVGSNVLESMDY 352 (377)
Q Consensus 284 avdp------~~g~lywtd~g~~~~I~r~~ldG~~~---~~l~~~~~~~P~glalD~~~~~LYw~-d~~~~~~i~~~~~ 352 (377)
++.. ..|.+|++++. ..+|.++.+++... ..++......|.++++++ .+.||++ |. ..++|+++..
T Consensus 277 ~~y~g~~fp~~~g~l~v~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p-dG~lyv~td~-~~g~I~ri~~ 352 (353)
T 2g8s_A 277 AFYNSDKFPQWQQKLFIGALK-DKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP-DGYLYVLTDE-SSGELLKVSP 352 (353)
T ss_dssp EEECCSSSGGGTTEEEEEETT-TTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT-TSCEEEEECS-TTEEEEEEEC
T ss_pred EEECCccCcccCCcEEEEEcc-CCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC-CCcEEEEEeC-CCCEEEEEeC
Confidence 9974 35899999985 68999999986422 122222245899999986 5679996 66 7789988853
No 69
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.49 E-value=7.9e-12 Score=118.91 Aligned_cols=239 Identities=9% Similarity=0.037 Sum_probs=156.9
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCcEEEEEe----CCCCCceEEEEEEC-----CeEEEEcCC---C----
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVKVAKVVS----MPDAAQVVAAVFYK-----GRIIYSDAN---D---- 78 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~~~~i~~----~~~~~~p~~lav~~-----~~ly~td~~---~---- 78 (377)
+..|.+++++++ ++||+++.. ++|.+++.+|. +.+.. ......|.||++.. ++||+++.. .
T Consensus 28 l~~P~~ia~~pd-G~l~V~e~~-g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGG-GRYLVTERP-GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEET-TEEEEEETT-TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCC-CeEEEEeCC-CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 678999999985 589999987 99999987776 33321 13456799999964 699999863 3
Q ss_pred CceEEEcCCCC-----ceEEEec----C-CC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcC
Q psy5792 79 GNIRSINLDGS-----NSTVLRN----N-AG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAG 147 (377)
Q Consensus 79 ~~I~~~~~~g~-----~~~~~~~----~-~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~ 147 (377)
++|.+++.++. ..+++.. . .. +.+|++ .+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~-~p--------------------------------------- 144 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRF-GP--------------------------------------- 144 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEE-CT---------------------------------------
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEE-CC---------------------------------------
Confidence 67999884443 1222211 0 11 233332 11
Q ss_pred CCcEEEEEeCC-------------CCeEEEEEcCCC--------CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC
Q psy5792 148 ISDFILFSVNS-------------GYDIMGIKYNKN--------ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH 206 (377)
Q Consensus 148 ~~~~l~~s~~~-------------~~~I~~~~l~~~--------~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~ 206 (377)
+..|+++.++ .|+|.+++.++. .. +. + ..++.+|.++++|+.++.||++|...
T Consensus 145 -DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~---~i-~-a~G~rnp~Gla~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 145 -DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNS---PI-W-SYGHRNPQGIDWHRASGVMVATEHGP 218 (354)
T ss_dssp -TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTC---CE-E-EECCSCCCEEEECTTTCCEEEEECCS
T ss_pred -CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCC---cE-E-EEccCCcceEEEeCCCCCEEEEecCC
Confidence 2235554321 256999998875 12 11 1 24678899999999889999999865
Q ss_pred C---cEEEEEcCCCC---------------cEEEEeccccCCCCCCCCcceEEE-------eccCCeEEEEcCCCCEEEE
Q psy5792 207 G---TISRTHRDGTG---------------RENIIEYVETGDPTPVDQFTDIAV-------DWIAQNIYWSDPKENVIEV 261 (377)
Q Consensus 207 ~---~I~~~~~~G~~---------------~~~i~~~~~~~~~~~~~~p~~iav-------D~~~~~lYwtd~~~~~I~~ 261 (377)
+ .|.++... .+ ...+.. .......|.|+++ +| .++||+++...++|.+
T Consensus 219 ~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~-----~~~~~~ap~G~~~y~g~~fp~~-~G~l~v~~~~~~~v~~ 291 (354)
T 3a9g_A 219 VGHDEVNIILKG-GNYGWPLATGKAGRGEFVDPVID-----TGSETWAPSGASFVHGDMFPGL-RGWLLIACLRGSMLAA 291 (354)
T ss_dssp SSCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEE-----CTTCCCCEEEEEECCSSSCGGG-TTEEEEEETTTTEEEE
T ss_pred CCCcEEEEecCC-CcCCCCcccCCCCCCCCcCCEee-----cCCCCcCCcceEEECCCCCccc-CCcEEEEEcCCCEEEE
Confidence 4 46665542 21 011111 0012235999999 64 6899999999999999
Q ss_pred EEcCCC--e--EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCC---------eEEEEecCC
Q psy5792 262 ARLTGQ--Y--RYVLISGGVDQPSALAVDPESGYLFWSESGKIP---------LIARAGLDG 310 (377)
Q Consensus 262 ~~~~g~--~--~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~---------~I~r~~ldG 310 (377)
+++++. . ...++......|++++++| .|.||++++.... +|+|+...|
T Consensus 292 ~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p-DG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 292 VNFGDNMEVRKISTFFKNVFGRLRDVVIDD-DGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp EEECGGGCEEEEEEECTTTSCCEEEEEECT-TSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred EEECCCCcccceeeeccCCCCCeeEEEECC-CCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 999853 2 2344443467899999998 5899999963223 888887654
No 70
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=8.3e-11 Score=110.24 Aligned_cols=227 Identities=11% Similarity=0.056 Sum_probs=155.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcC-CCCceE
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINL-DGSNST 92 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~-~g~~~~ 92 (377)
..+.|.+.|+.++++||++...+.|.++++++. .+.+. ....|.++++ .++.+|++.. ..|.+++. +|+..
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---~~~~v~~i~~~~dg~l~v~~~--~gl~~~d~~~g~~~- 122 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA---LPFMGSALAKISDSKQLIASD--DGLFLRDTATGVLT- 122 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE---CSSCEEEEEEEETTEEEEEET--TEEEEEETTTCCEE-
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE---CCCcceEEEEeCCCeEEEEEC--CCEEEEECCCCcEE-
Confidence 456788999988999999999999999999988 65553 2346888888 6778888762 34777763 33221
Q ss_pred EEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCc
Q psy5792 93 VLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNES 172 (377)
Q Consensus 93 ~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~ 172 (377)
.+.. ....
T Consensus 123 ~~~~----------------------------------------------------------------------~~~~-- 130 (326)
T 2ghs_A 123 LHAE----------------------------------------------------------------------LESD-- 130 (326)
T ss_dssp EEEC----------------------------------------------------------------------SSTT--
T ss_pred EEee----------------------------------------------------------------------CCCC--
Confidence 1100 0000
Q ss_pred eeeEEEEecCCCCceEEEEEECCCCEEEEEEcC------CCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC
Q psy5792 173 KVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID------HGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA 246 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~------~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~ 246 (377)
.....+..+++|+ ++++|+++.. .+.|++++ +|.. +.+.. ....|.++++++.+
T Consensus 131 ---------~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~-~~~~~--------~~~~~~~i~~s~dg 190 (326)
T 2ghs_A 131 ---------LPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKV-TKLFA--------DISIPNSICFSPDG 190 (326)
T ss_dssp ---------CTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEE-EEEEE--------EESSEEEEEECTTS
T ss_pred ---------CCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcE-EEeeC--------CCcccCCeEEcCCC
Confidence 0012355666776 4567777642 35788888 5432 23322 34568999999877
Q ss_pred CeEEEEcCCCCEEEEEEcC---C-C--eEEEEee--CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEe
Q psy5792 247 QNIYWSDPKENVIEVARLT---G-Q--YRYVLIS--GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ 318 (377)
Q Consensus 247 ~~lYwtd~~~~~I~~~~~~---g-~--~~~~l~~--~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~ 318 (377)
+.||+++...++|.+.+++ | . .++++.. .....|.++++|+ .|.||++.++ ..+|.+.+.+|.....+..
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~-~~~v~~~d~~g~~~~~i~~ 268 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWG-EGAVDRYDTDGNHIARYEV 268 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeC-CCEEEEECCCCCEEEEEEC
Confidence 7899999988999999985 4 2 1233332 1245699999997 6899999875 5789999987765444433
Q ss_pred cCCCCceEEEEe-CCCCEEEEEEeCCC
Q psy5792 319 EIIMPIKDITLD-RKNKRVYWCYSVGS 344 (377)
Q Consensus 319 ~~~~~P~glalD-~~~~~LYw~d~~~~ 344 (377)
. ...|.+++++ ...+.||++.. ..
T Consensus 269 ~-~~~~~~~af~g~d~~~L~vt~~-~~ 293 (326)
T 2ghs_A 269 P-GKQTTCPAFIGPDASRLLVTSA-RE 293 (326)
T ss_dssp S-CSBEEEEEEESTTSCEEEEEEB-CT
T ss_pred C-CCCcEEEEEecCCCCEEEEEec-CC
Confidence 2 4579999998 66789999887 54
No 71
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.46 E-value=6.5e-12 Score=119.40 Aligned_cols=168 Identities=18% Similarity=0.178 Sum_probs=114.8
Q ss_pred CCceEEEEEECC---CCEEEEEEcCC-----CcEEEEEcCCC---CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEE
Q psy5792 184 VSLAAKVDFHAA---EDYIYWVDIDH-----GTISRTHRDGT---GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWS 252 (377)
Q Consensus 184 ~~~~~~l~~d~~---~~~ly~sd~~~-----~~I~~~~~~G~---~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwt 252 (377)
...+.+|++++. ++.||+++... ++|.+++.++. ..++++... .........|.+|++++ .++||++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~-p~~~~~~h~~~~l~~~p-dG~Lyv~ 151 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGI-PARPHGLHSGGRIAFGP-DGMLYVT 151 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEE-CCCTTCCCCCCCEEECT-TSCEEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeC-CCCCCCCcCCceEEECC-CCCEEEE
Confidence 345888888886 68999998754 78999998864 233443310 00012345689999997 5799999
Q ss_pred cCC-------------CCEEEEEEcCCCe------------EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCC------
Q psy5792 253 DPK-------------ENVIEVARLTGQY------------RYVLISGGVDQPSALAVDPESGYLFWSESGKIP------ 301 (377)
Q Consensus 253 d~~-------------~~~I~~~~~~g~~------------~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~------ 301 (377)
+.. .++|.+++++|+. ...+...++..|.+|++||.+|.||++|.+...
T Consensus 152 ~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~ 231 (352)
T 2ism_A 152 TGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGH 231 (352)
T ss_dssp CCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CC
T ss_pred ECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCC
Confidence 742 3699999999831 122334468899999999988999999987422
Q ss_pred -eEEEEecCCC---------------CeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 302 -LIARAGLDGK---------------KQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 302 -~I~r~~ldG~---------------~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
.|.++.-.+. ......-.....|.|+++ ..+.||+++. ..++|.++++++..
T Consensus 232 dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~--~~G~l~v~~~-~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 232 DEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF--FRGDLYVAGL-RGQALLRLVLEGER 299 (352)
T ss_dssp CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE--ETTEEEEEET-TTTEEEEEEEEEET
T ss_pred eEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE--ECCEEEEEEC-CCCEEEEEEECCCC
Confidence 3666643320 011111111346999999 4689999999 99999999998543
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.46 E-value=1.5e-10 Score=108.55 Aligned_cols=260 Identities=12% Similarity=0.079 Sum_probs=159.0
Q ss_pred CcCCccccccCCCCeEEEEeCC--CCcEEEEEcCCc-EEEEEe-CCCCCceEEEEE--ECCeEEEEcCCCCceEEEc--C
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTL--SHSLHYVNIEVK-VAKVVS-MPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN--L 86 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~--~~~I~~~~~dG~-~~~i~~-~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~--~ 86 (377)
...|.++++++++. ||+++.. .+.|...++++. .+.+.. ......|.+|++ .+.+||+++...+.|..++ .
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 35899999999766 9999864 688999999766 444431 134668999999 4557999998888888877 3
Q ss_pred CCCceEEE--ecC-CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEE
Q psy5792 87 DGSNSTVL--RNN-AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIM 163 (377)
Q Consensus 87 ~g~~~~~~--~~~-~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~ 163 (377)
+|....+. ... .+|. .++ .. ..+..+++ .++.-++++....+.|.
T Consensus 118 ~g~~~~~~~~~~~~~~p~-------~~~---~~-------~~~~~~~~---------------spdg~l~v~~~~~~~v~ 165 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPR-------PEQ---DG-------SHIHYTDL---------------TPDNRLAVIDLGSDKVY 165 (347)
T ss_dssp TSCEEEEEEEECCCCCSS-------TTC---SS-------CCEEEEEE---------------CTTSCEEEEETTTTEEE
T ss_pred CCCeeecceeecCCCCCC-------ccc---cC-------CCceEEEE---------------CCCCcEEEEeCCCCEEE
Confidence 44332221 110 0010 000 00 00000000 11112677776666788
Q ss_pred EEEcCCCCceeeE-EEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC--CCcEEEEeccc-cCCCCCCCCcce
Q psy5792 164 GIKYNKNESKVTQ-VLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG--TGRENIIEYVE-TGDPTPVDQFTD 239 (377)
Q Consensus 164 ~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G--~~~~~i~~~~~-~~~~~~~~~p~~ 239 (377)
.++++.... +.. ..........|..+++++.++.||+++...+.|..++++. ...+.+..... .........|.+
T Consensus 166 ~~~~~~~g~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (347)
T 3hfq_A 166 VYNVSDAGQ-LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA 244 (347)
T ss_dssp EEEECTTSC-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE
T ss_pred EEEECCCCc-EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCccee
Confidence 888873221 011 1112333456889999998888999998888888887764 12111111000 000011235889
Q ss_pred EEEeccCCeEEEEcCCCCEEEEEEcC--CCeEE-EEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 240 IAVDWIAQNIYWSDPKENVIEVARLT--GQYRY-VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 240 iavD~~~~~lYwtd~~~~~I~~~~~~--g~~~~-~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
+++++.++.||+++...++|.+.+++ |.... ..+......|++++++|...+||+++.. ...|....++
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~d 316 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN-TDNATLYARD 316 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT-TTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC-CCcEEEEEEe
Confidence 99999888899999888899999886 33222 1223335579999999988899999875 4566665444
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.43 E-value=1.5e-10 Score=107.43 Aligned_cols=259 Identities=11% Similarity=0.056 Sum_probs=173.4
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-E-EEEEeCCCCCceEE-EEE--ECCeEEEEcCCCC--ceEEEc-CCC
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-V-AKVVSMPDAAQVVA-AVF--YKGRIIYSDANDG--NIRSIN-LDG 88 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~-~~i~~~~~~~~p~~-lav--~~~~ly~td~~~~--~I~~~~-~~g 88 (377)
.| ++++++++++||++....+.|..+|+++. . ...+ .....|.. +++ .+.+||.++...+ .|..++ .++
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI--QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE--EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec--ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 45 99999999999999999999999999777 4 5544 44556777 888 4557885554434 899999 566
Q ss_pred CceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCe-EEEEEc
Q psy5792 89 SNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYD-IMGIKY 167 (377)
Q Consensus 89 ~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~-I~~~~l 167 (377)
+....+.....|.++++ +++.+ +++++....+. |..+++
T Consensus 119 ~~~~~~~~~~~~~~~~~-spdg~---------------------------------------~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 119 KFISTIPIPYDAVGIAI-SPNGN---------------------------------------GLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EEEEEEECCTTEEEEEE-CTTSS---------------------------------------CEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCccceEE-CCCCC---------------------------------------EEEEEecCCCceEEEEEE
Confidence 65555554444777665 33322 46666655445 777776
Q ss_pred CCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc---EEEEeccccCCCCCCCCcceEEEec
Q psy5792 168 NKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR---ENIIEYVETGDPTPVDQFTDIAVDW 244 (377)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~---~~i~~~~~~~~~~~~~~p~~iavD~ 244 (377)
+....-.......+.....+.++++++.++++|+++...+.|..++++.... ...+. .-..|.++++++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~~~~sp 230 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--------TNNLPGTIVVSR 230 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--------CSSCCCCEEECT
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--------CCCCCceEEECC
Confidence 6433200000122234456999999998889999998889999999874443 22222 225699999999
Q ss_pred cCCeEEEEcCCCCEEEEEEcCCCeEEEEe--eCC-------CCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEE
Q psy5792 245 IAQNIYWSDPKENVIEVARLTGQYRYVLI--SGG-------VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTI 315 (377)
Q Consensus 245 ~~~~lYwtd~~~~~I~~~~~~g~~~~~l~--~~~-------~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~ 315 (377)
.++.||+++...+.|.+.++.....+.+. ... .....+++++|...+||++... ...|...++++.....
T Consensus 231 dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI-SRELKVFTISGKVVGY 309 (331)
T ss_dssp TSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred CCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC-CCcEEEEEecCCcccc
Confidence 88889999988889999999865442221 111 1112458999988899999864 5788888887654333
Q ss_pred EEecCCCCceEEEE
Q psy5792 316 LAQEIIMPIKDITL 329 (377)
Q Consensus 316 l~~~~~~~P~glal 329 (377)
+. .+....++++
T Consensus 310 ~~--~~~~~g~~~~ 321 (331)
T 3u4y_A 310 VA--GIEANGGIAI 321 (331)
T ss_dssp CT--TCCCBSCEEE
T ss_pred ee--cccccCCeEE
Confidence 21 2334444544
No 74
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=1.2e-11 Score=116.72 Aligned_cols=212 Identities=14% Similarity=0.135 Sum_probs=141.2
Q ss_pred CcCCccccccCCCCeEEEEeCC-----CCcEEEEEcC-Cc-EEEEEeC----CCCCceEEEEEE--CCeEEEEcC---CC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTL-----SHSLHYVNIE-VK-VAKVVSM----PDAAQVVAAVFY--KGRIIYSDA---ND 78 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~-----~~~I~~~~~d-G~-~~~i~~~----~~~~~p~~lav~--~~~ly~td~---~~ 78 (377)
+..|.|+++|.. ++|||+|.. ..+|.++|++ |+ .+++... .....|.+|++. ++++|++|. ..
T Consensus 66 ~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 66 FDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred eeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 578999999987 689999987 5899999997 55 5555311 112467999996 579999998 77
Q ss_pred CceEEEc-CCCCceEEEecC--CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEE
Q psy5792 79 GNIRSIN-LDGSNSTVLRNN--AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFS 155 (377)
Q Consensus 79 ~~I~~~~-~~g~~~~~~~~~--~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s 155 (377)
+.|.+++ .+|+..+++... ..|.... +..
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~------------------------------------------------~~~ 176 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDID------------------------------------------------LVI 176 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCC------------------------------------------------CEE
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccc------------------------------------------------eeE
Confidence 8999999 556655544220 0010000 000
Q ss_pred eCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC----CCC--cE-----EEEe
Q psy5792 156 VNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD----GTG--RE-----NIIE 224 (377)
Q Consensus 156 ~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~----G~~--~~-----~i~~ 224 (377)
++.. +...+.++. +.+. ...+.+|++++.++.||+++....+|++++.+ +.. .+ ....
T Consensus 177 ~g~~--~~~~~~~g~-------~~~~--~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 177 DGVP--VQIGQPDGT-------VIRP--HLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TTEE--CBEECTTSC-------EECC--CCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred CCEE--EEeccCCCc-------eece--ecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 0000 100011111 0000 12467899999888999999988899999853 210 00 1111
Q ss_pred ccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEc-CCCeEEEEeeC-CCCCceeEEEcCCCCeEEEEec
Q psy5792 225 YVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARL-TGQYRYVLISG-GVDQPSALAVDPESGYLFWSES 297 (377)
Q Consensus 225 ~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~-~g~~~~~l~~~-~~~~P~~iavdp~~g~lywtd~ 297 (377)
..+.|.||++|. .++||+++...++|.+.+. +|+.. ++... .+..|.++++++ .|.||+++.
T Consensus 246 --------~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~-~g~l~v~~~ 309 (343)
T 2qe8_A 246 --------EKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYK-LLVTDEKLSWTDSFNFGS-DGYLYFDCN 309 (343)
T ss_dssp --------ECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEE-EEEECGGGSCEEEEEECT-TSCEEEEEC
T ss_pred --------cCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEE-EEEECCceecCCeeEECC-CCcEEEEeC
Confidence 234799999996 6899999999999999999 77643 44443 377899999998 589999985
No 75
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.41 E-value=1.1e-09 Score=104.02 Aligned_cols=238 Identities=12% Similarity=0.119 Sum_probs=174.6
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
..|.++++++.+.+||++....+.|...|+... ...+ .....+.++++ .+.+||++....+.|..++ .+++.
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV---PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---ECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 468899999999999999988999999999666 4444 23338899999 4667999988889999999 55655
Q ss_pred eEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 91 STVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 91 ~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
...+.....+.++.+ +++. ..++++....+.|+.+++...
T Consensus 109 ~~~~~~~~~~~~~~~-s~dg---------------------------------------~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 109 AGTVKTGKSPLGLAL-SPDG---------------------------------------KKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp EEEEECSSSEEEEEE-CTTS---------------------------------------SEEEEEETTTTEEEEEETTTT
T ss_pred EEEEeCCCCcceEEE-CCCC---------------------------------------CEEEEEeCCCCEEEEEECCCC
Confidence 555544333656554 3322 246667666667999888765
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
.. +..+.....+..+++++.++.||++....+.|+..++.......... .-..+.++++++.++.||
T Consensus 149 ~~-----~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 149 AV-----INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK--------VEAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp EE-----EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSEEEEEEECTTSSEEE
T ss_pred cE-----EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe--------cCCCccceEECCCCCEEE
Confidence 32 22233345688999999888999998888999999987544333333 234689999998888899
Q ss_pred EEcC--CCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC
Q psy5792 251 WSDP--KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 251 wtd~--~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
.+.. ..+.|.+.++........+.. ...|.+++++|.+.+||++... ..+|...++...
T Consensus 216 ~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~s~~~-d~~v~v~d~~~~ 276 (391)
T 1l0q_A 216 VTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALSF-XNTVSVIDTATN 276 (391)
T ss_dssp EEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETT-TTEEEEEETTTT
T ss_pred EEecCcCCCcEEEEECCCCeEEEEEec-CCCccEEEEccCCCEEEEEcCC-CCEEEEEECCCC
Confidence 8876 678999999987655444443 4568999999988899998753 578888887643
No 76
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.41 E-value=2e-10 Score=108.36 Aligned_cols=240 Identities=14% Similarity=0.185 Sum_probs=158.5
Q ss_pred EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcC-CCCceEEE------ecCCC-ceeEEeeecCCCCcccCCCc
Q psy5792 49 VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINL-DGSNSTVL------RNNAG-ISDFILFSVNSGYDIMGIKY 119 (377)
Q Consensus 49 ~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~-~g~~~~~~------~~~~~-p~~i~v~~~~~~~~~~~~~C 119 (377)
.+++. ..+..|++|++ -++.||+++...++|++++. +|+...+. ..+.. +.||++ +|+-.
T Consensus 24 ~~~va--~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~-~Pdf~-------- 92 (347)
T 3das_A 24 LRTVA--TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIAL-SPDYA-------- 92 (347)
T ss_dssp EEEEE--CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEE-CTTHH--------
T ss_pred eEEee--cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEe-ccccc--------
Confidence 45565 78999999999 67799999998899999984 45543321 12233 888876 44210
Q ss_pred CCCCCCceeccccCCCccccCCcCCCcCCCcEEEE--EeCCCCeEEEEEcCCCC-----ceeeEEEE---ecCCCCceEE
Q psy5792 120 NKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILF--SVNSGYDIMGIKYNKNE-----SKVTQVLG---PLSKVSLAAK 189 (377)
Q Consensus 120 ~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~--s~~~~~~I~~~~l~~~~-----~~~~~~~~---~~~~~~~~~~ 189 (377)
.+..|++ +....+.|.++.+++.. ....+.++ |.........
T Consensus 93 ----------------------------~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~ 144 (347)
T 3das_A 93 ----------------------------SDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGR 144 (347)
T ss_dssp ----------------------------HHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCC
T ss_pred ----------------------------cCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCcc
Confidence 0112433 43334459999887621 10012222 2222334667
Q ss_pred EEEECCCCEEEEEEc-------------CCCcEEEEEcCCC--------CcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 190 VDFHAAEDYIYWVDI-------------DHGTISRTHRDGT--------GRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 190 l~~d~~~~~ly~sd~-------------~~~~I~~~~~~G~--------~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
|+|++ +++||++-- ..++|+|++.+|+ ..++ .. .++.+|.+|++|+ .+.
T Consensus 145 l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i-~a-------~G~RNp~Gla~dp-~G~ 214 (347)
T 3das_A 145 IAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPV-YS-------YGHRNVQGLAWDD-KQR 214 (347)
T ss_dssp EEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCE-EE-------BCCSBCCEEEECT-TCC
T ss_pred ccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeE-Ee-------eCCCCcceEEECC-CCC
Confidence 99998 579999942 3579999999987 4344 44 4788899999998 799
Q ss_pred EEEEcCCCC---EEEEEEcCCCe----E----------E-EEee-CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 249 IYWSDPKEN---VIEVARLTGQY----R----------Y-VLIS-GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 249 lYwtd~~~~---~I~~~~~~g~~----~----------~-~l~~-~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
||++|.... .|.++...+.+ + . +... .....|.||++. .|.+|.++.. ..+|.|+.++
T Consensus 215 L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~-~~~l~~v~~~ 291 (347)
T 3das_A 215 LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLR-GERLWRIPLK 291 (347)
T ss_dssp EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE--TTEEEEEEST-TCSEEEEEEE
T ss_pred EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE--cCceeecccc-CCEEEEEEec
Confidence 999997653 56665543321 0 0 0111 112468899995 7999999985 6899999988
Q ss_pred CCC----eEEEEecCCCCceEEEEeCCCCEEEEEEe
Q psy5792 310 GKK----QTILAQEIIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 310 G~~----~~~l~~~~~~~P~glalD~~~~~LYw~d~ 341 (377)
+.. .+.++......|.++++++ .+.||+++.
T Consensus 292 ~~~~~~~~e~~l~~~~gR~~dv~~~p-DG~lyv~td 326 (347)
T 3das_A 292 GTAAAADPQAFLEGEYGRLRTVAPAG-GDKLWLVTS 326 (347)
T ss_dssp TTEESSCCEEESTTTSSCEEEEEEEE-TTEEEEEEC
T ss_pred CCceecceEEeecCCCCCccEEEECC-CCcEEEEEc
Confidence 653 2444544467899999985 689999976
No 77
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.39 E-value=6.4e-11 Score=112.57 Aligned_cols=248 Identities=8% Similarity=0.053 Sum_probs=153.5
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEe-----CCCCCceEEEEEE-----CCeEEEEcCC------
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVS-----MPDAAQVVAAVFY-----KGRIIYSDAN------ 77 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~-----~~~~~~p~~lav~-----~~~ly~td~~------ 77 (377)
+..|.++++++++.+||+++. .++|.+++.+|. .+.+.. ......|.+|++. +++||+++..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLR-GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEET-TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 678999999987644999997 489999998887 433210 1234578999995 6899999764
Q ss_pred -CCceEEEcCCCC-----ceEEEecCC-------C-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcC
Q psy5792 78 -DGNIRSINLDGS-----NSTVLRNNA-------G-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVD 143 (377)
Q Consensus 78 -~~~I~~~~~~g~-----~~~~~~~~~-------~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~ 143 (377)
..+|.+++.++. ..+++.... . +.+|++
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~-------------------------------------- 137 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVF-------------------------------------- 137 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEE--------------------------------------
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEE--------------------------------------
Confidence 346888873321 122221110 0 112211
Q ss_pred CCcCCCcEEEEEeCC-------------CCeEEEEEcCCCCce----------eeEEEEecCCCCceEEEEEECCCCEEE
Q psy5792 144 FHAGISDFILFSVNS-------------GYDIMGIKYNKNESK----------VTQVLGPLSKVSLAAKVDFHAAEDYIY 200 (377)
Q Consensus 144 ~C~~~~~~l~~s~~~-------------~~~I~~~~l~~~~~~----------~~~~~~~~~~~~~~~~l~~d~~~~~ly 200 (377)
+++..|+++.++ .|+|.+++.++.-.. ..+ ++ ..++.+|.++++|+.++.||
T Consensus 138 ---~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~-i~-a~G~rnp~gl~~d~~~g~l~ 212 (353)
T 2g8s_A 138 ---DGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAE-IW-SYGIRNPQGMAMNPWSNALW 212 (353)
T ss_dssp ---CSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTT-EE-EECCSEEEEEEEETTTTEEE
T ss_pred ---CCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCcc-EE-EEcCcCccceEEECCCCCEE
Confidence 123457777543 357999999875100 001 11 24677899999999889999
Q ss_pred EEEcCC---CcEEEEEcCCCC---cE---------EEE-----eccccCCC----CCCCCcceEEEec------cCCeEE
Q psy5792 201 WVDIDH---GTISRTHRDGTG---RE---------NII-----EYVETGDP----TPVDQFTDIAVDW------IAQNIY 250 (377)
Q Consensus 201 ~sd~~~---~~I~~~~~~G~~---~~---------~i~-----~~~~~~~~----~~~~~p~~iavD~------~~~~lY 250 (377)
++|... ..|.++...+.. .. .+. .......+ .....|.|+++.. ..+.+|
T Consensus 213 ~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~ 292 (353)
T 2g8s_A 213 LNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLF 292 (353)
T ss_dssp EEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEE
T ss_pred EEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEE
Confidence 999764 356655432210 00 000 00000000 0112588999962 257999
Q ss_pred EEcCCCCEEEEEEcCCCeE---EEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5792 251 WSDPKENVIEVARLTGQYR---YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAG 307 (377)
Q Consensus 251 wtd~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ 307 (377)
+++...++|.++++++... ..++.....+|++|+++| .|.||+++.....+|+|+.
T Consensus 293 v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p-dG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 293 IGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP-DGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT-TSCEEEEECSTTEEEEEEE
T ss_pred EEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC-CCcEEEEEeCCCCEEEEEe
Confidence 9999999999999986431 223333346899999998 6889997432367899875
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.37 E-value=3.5e-09 Score=101.92 Aligned_cols=287 Identities=9% Similarity=0.048 Sum_probs=189.3
Q ss_pred Ccccc---ccCCCCeEEEEeCCC---------C------cEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCC
Q psy5792 18 VASTL---KPQSGPFVYGVKTLS---------H------SLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDAN 77 (377)
Q Consensus 18 ~~~~~---~d~~~~~ly~~d~~~---------~------~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~ 77 (377)
+..++ ..+....+|++.... + .|..++.++. .+.+........|.++++ .++.+|++...
T Consensus 63 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 142 (433)
T 3bws_A 63 LVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLE 142 (433)
T ss_dssp EEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTT
T ss_pred cEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCC
Confidence 34455 566666777665432 2 6777777653 332221133445777888 47889999888
Q ss_pred CCceEEEc-CCCCceEEEec-----CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCc
Q psy5792 78 DGNIRSIN-LDGSNSTVLRN-----NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISD 150 (377)
Q Consensus 78 ~~~I~~~~-~~g~~~~~~~~-----~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~ 150 (377)
.+.|...+ .+|+....+.. ... +.++++ +++ .
T Consensus 143 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~-~~~----------------------------------------~ 181 (433)
T 3bws_A 143 DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI-PEH----------------------------------------N 181 (433)
T ss_dssp SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE-GGG----------------------------------------T
T ss_pred CCeEEEEECCCCeEeeecCcccccccCCceeEEEE-cCC----------------------------------------C
Confidence 88899999 55655543221 111 233332 221 2
Q ss_pred EEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCC
Q psy5792 151 FILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGD 230 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~ 230 (377)
.++++....+.|+.++++.... ... +. .....+.++++++.++.+|++....+.|...++..........
T Consensus 182 ~~~~s~~~d~~v~~~d~~~~~~--~~~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~------ 251 (433)
T 3bws_A 182 ELWVSQMQANAVHVFDLKTLAY--KAT-VD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD------ 251 (433)
T ss_dssp EEEEEEGGGTEEEEEETTTCCE--EEE-EE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC------
T ss_pred EEEEEECCCCEEEEEECCCceE--EEE-Ec-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec------
Confidence 3666665556799998876533 111 11 2345689999999999999999888999999987433222222
Q ss_pred CCCCCCcceEEEeccCCeEEEEcC-------CCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDP-------KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 303 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~-------~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I 303 (377)
....|.++++++.++.||.+.. ..+.|.+.++........+.. ...|.+++++|....||++... ..+|
T Consensus 252 --~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~-~~~v 327 (433)
T 3bws_A 252 --KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PGNKRHIVSGNTENKIYVSDMC-CSKI 327 (433)
T ss_dssp --CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EECEEEEEECSSTTEEEEEETT-TTEE
T ss_pred --CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-CCCcceEEECCCCCEEEEEecC-CCEE
Confidence 2345999999987778888764 356899999976654333322 2368999999987799999764 6889
Q ss_pred EEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCC--------------CeEEEEEccCCceEEEE
Q psy5792 304 ARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGS--------------NVLESMDYSGGSKMQLK 361 (377)
Q Consensus 304 ~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~--------------~~i~~~~~~G~~~~~~~ 361 (377)
...+++.......+.. ...|.++++++.++.||.+.. .. +.|...+...+.....+
T Consensus 328 ~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 328 EVYDLKEKKVQKSIPV-FDKPNTIALSPDGKYLYVSCR-GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEC-CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred EEEECCCCcEEEEecC-CCCCCeEEEcCCCCEEEEEec-CCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 9999885544433443 467899999988888999887 54 48999998755444333
No 79
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.36 E-value=9.2e-09 Score=103.67 Aligned_cols=327 Identities=9% Similarity=0.029 Sum_probs=204.0
Q ss_pred ceeEeeccccC------CCCcCCccccccCCCCeEEEEeCCCCcEEEEEcC---Cc-EEEEEeCCCCCceEEEEEE----
Q psy5792 2 GYLHVLPYTRN------PSFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIE---VK-VAKVVSMPDAAQVVAAVFY---- 67 (377)
Q Consensus 2 ~~~~~~~~~~~------~~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~d---G~-~~~i~~~~~~~~p~~lav~---- 67 (377)
|++.|.|-... ++...|.++++++++.++|++. ..+.|..+|+. ++ ..++ .....|.+|++.
T Consensus 177 ~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~~~v~~i---~~G~~P~~ia~s~~~~ 252 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEPTTVAEI---KIGSEARSIETSKMEG 252 (567)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSCCEEEEE---ECCSEEEEEEECCSTT
T ss_pred CeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEc-CCCeEEEEECCCCCCcEeEEE---ecCCCCceeEEccccC
Confidence 45666664332 3456889999999999999986 46789999994 44 5555 345689999996
Q ss_pred --CCeEEEEcCCCCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCC
Q psy5792 68 --KGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDF 144 (377)
Q Consensus 68 --~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~ 144 (377)
+.++|+++...+.|..+| .+.+....+.....+.+-.-|++... .+.+.. ++
T Consensus 253 pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~r--------------va~i~~-s~---------- 307 (567)
T 1qks_A 253 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR--------------VAAILA-SH---------- 307 (567)
T ss_dssp CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCC--------------EEEEEE-CS----------
T ss_pred CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCc--------------eEEEEE-cC----------
Confidence 448999999999999999 66666555432100000000111100 000000 00
Q ss_pred CcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEe
Q psy5792 145 HAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIE 224 (377)
Q Consensus 145 C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~ 224 (377)
..+.++++....|.|..++...... ..+..+.....+.++.+++.+.++|.++..+++|..++.........+.
T Consensus 308 ---~~~~~vv~~~~~g~v~~vd~~~~~~---~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 308 ---YRPEFIVNVKETGKILLVDYTDLNN---LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp ---SSSEEEEEETTTTEEEEEETTCSSE---EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred ---CCCEEEEEecCCCeEEEEecCCCcc---ceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 0124556666667788888765432 1222233345688889999899999999989999999987432222222
Q ss_pred ccccCCCC--CCCCc-ceEE-EeccCCeEEEEcC-CCCEEEEEEcCC--------CeEEEEeeCCCCCceeEEEcCCCCe
Q psy5792 225 YVETGDPT--PVDQF-TDIA-VDWIAQNIYWSDP-KENVIEVARLTG--------QYRYVLISGGVDQPSALAVDPESGY 291 (377)
Q Consensus 225 ~~~~~~~~--~~~~p-~~ia-vD~~~~~lYwtd~-~~~~I~~~~~~g--------~~~~~l~~~~~~~P~~iavdp~~g~ 291 (377)
. ...+| .|.. +++..+.+|.+.. ..+.|.+++.+. +..+++ ......+..|+++|...+
T Consensus 382 -------vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i-~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 382 -------TGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF-PALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp -------CSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-ECSCSCCCCEECCTTCSE
T ss_pred -------ccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE-ecCCCCCEEEEeCCCCCe
Confidence 1 12234 3655 4766678887754 558999999875 223333 222344677999998888
Q ss_pred EEEEecCC-----CCeEEEEecCC-----CCe--EEEEe-------cCCCCceEEEEeCCCCEEEEEEeC---CCCeEEE
Q psy5792 292 LFWSESGK-----IPLIARAGLDG-----KKQ--TILAQ-------EIIMPIKDITLDRKNKRVYWCYSV---GSNVLES 349 (377)
Q Consensus 292 lywtd~g~-----~~~I~r~~ldG-----~~~--~~l~~-------~~~~~P~glalD~~~~~LYw~d~~---~~~~i~~ 349 (377)
||+..... ..+|..++++- ... +++.. +.-..|..++++..+.+||++.++ ..+.|..
T Consensus 454 l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v 533 (567)
T 1qks_A 454 LYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVV 533 (567)
T ss_dssp EEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEE
T ss_pred EEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEE
Confidence 88876421 24788876542 232 33311 112478899999999999999761 2688988
Q ss_pred EEccCCceEEEEecCCCCCccc
Q psy5792 350 MDYSGGSKMQLKLSSNIKNALL 371 (377)
Q Consensus 350 ~~~~G~~~~~~~~~~~~~~p~~ 371 (377)
+|.........+....+..|-+
T Consensus 534 ~D~~t~~~~~~i~~~~~~~P~g 555 (567)
T 1qks_A 534 VDDKTLELKHVIKDERLVTPTG 555 (567)
T ss_dssp EETTTTEEEEEECCTTCCSEEE
T ss_pred EECCCceEEEEeCCCcccCCCe
Confidence 8877544444454556777743
No 80
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.36 E-value=8.1e-10 Score=100.31 Aligned_cols=202 Identities=9% Similarity=-0.042 Sum_probs=139.5
Q ss_pred CCccccccCCCCeEEEEeC--CCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 17 AVASTLKPQSGPFVYGVKT--LSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~--~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
.|.|++++++ ++||.+.. ..+.|.++|+... ..++- ......+.|+++.+++||++++..+.+.++| .+++..
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHK-MDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence 5789999976 69999975 4789999999765 55552 2444566788999999999999999999999 677776
Q ss_pred EEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 92 TVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 92 ~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
..+..+ .|.|..+.... ..+++++. ++.|..++.....
T Consensus 100 ~~i~~g-~~~g~glt~Dg----------------------------------------~~l~vs~g-s~~l~viD~~t~~ 137 (266)
T 2iwa_A 100 KNFTHQ-MKDGWGLATDG----------------------------------------KILYGSDG-TSILYEIDPHTFK 137 (266)
T ss_dssp EEEECC-SSSCCEEEECS----------------------------------------SSEEEECS-SSEEEEECTTTCC
T ss_pred EEEECC-CCCeEEEEECC----------------------------------------CEEEEECC-CCeEEEEECCCCc
Confidence 666544 23333332221 13777774 4578888776543
Q ss_pred ceeeEEEEecC----CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccc------cCCCCCCCCcceEE
Q psy5792 172 SKVTQVLGPLS----KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVE------TGDPTPVDQFTDIA 241 (377)
Q Consensus 172 ~~~~~~~~~~~----~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~------~~~~~~~~~p~~ia 241 (377)
. .. ..++. ....+..+.+. +++||......+.|.++++........+.... .........|.|||
T Consensus 138 v--~~-~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa 212 (266)
T 2iwa_A 138 L--IK-KHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIA 212 (266)
T ss_dssp E--EE-EEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEE
T ss_pred E--EE-EEEECCCCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEE
Confidence 3 11 22222 12246677777 67999999888999999997544333332110 00111234689999
Q ss_pred EeccCCeEEEEcCCCCEEEEEEcCCC
Q psy5792 242 VDWIAQNIYWSDPKENVIEVARLTGQ 267 (377)
Q Consensus 242 vD~~~~~lYwtd~~~~~I~~~~~~g~ 267 (377)
+|+.++++|+|.+..+++.++++...
T Consensus 213 ~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 213 WDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999999999999999887543
No 81
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.36 E-value=9.8e-09 Score=103.08 Aligned_cols=302 Identities=9% Similarity=0.062 Sum_probs=200.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEc--C-Cc-EEEEEeCCCCCceEEEEEE------CCeEEEEcCCCCceEEEc
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNI--E-VK-VAKVVSMPDAAQVVAAVFY------KGRIIYSDANDGNIRSIN 85 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~--d-G~-~~~i~~~~~~~~p~~lav~------~~~ly~td~~~~~I~~~~ 85 (377)
..|.++++++++++||.++.. +.|..+|+ . ++ ..++ .....|.++++. +.+||+++...+.|..+|
T Consensus 179 ~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i---~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 179 YAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEI---KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp TTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEE---ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEE---ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 358899999999999999887 99999999 3 33 5555 346689999994 457999988788899998
Q ss_pred -CCCCceEEEecCC------------CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEE
Q psy5792 86 -LDGSNSTVLRNNA------------GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFI 152 (377)
Q Consensus 86 -~~g~~~~~~~~~~------------~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l 152 (377)
.+++...++.... .+.++.+ ++ ....+
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~-s~---------------------------------------~~~~~ 294 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA-SH---------------------------------------EHPEF 294 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEESCCCEEEEEE-CS---------------------------------------SSSEE
T ss_pred ccccccceeecccCcccCccccccCCceEEEEE-CC---------------------------------------CCCEE
Confidence 6676665554210 0122221 11 12357
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCC
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPT 232 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~ 232 (377)
+++....+.|..+++..... .. +..+.....+.++++++.++++|.++...++|..++.........+.. .
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~--l~-~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~------g 365 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDN--LT-VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV------G 365 (543)
T ss_dssp EEEETTTTEEEEEECTTSSS--CE-EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC------S
T ss_pred EEEECCCCeEEEEEecCCCc--ce-eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc------C
Confidence 77777777899998865432 11 112223455888999998889999998889999999874332222220 1
Q ss_pred CCCCc-ceEEE-eccCCeEEEEcC-CCCEEEEEEcCC--------CeEEEEeeCCCCCceeEEEcCCCCeEEEEecCC--
Q psy5792 233 PVDQF-TDIAV-DWIAQNIYWSDP-KENVIEVARLTG--------QYRYVLISGGVDQPSALAVDPESGYLFWSESGK-- 299 (377)
Q Consensus 233 ~~~~p-~~iav-D~~~~~lYwtd~-~~~~I~~~~~~g--------~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~-- 299 (377)
...+| .+..+ ++..+.+|.+.. ..++|.+.+.+. +..+++ ......+..|+++|...+||......
T Consensus 366 ~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l-~~~g~~~~~v~~~pdg~~l~v~~~~~~~ 444 (543)
T 1nir_A 366 KTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-QGQGGGSLFIKTHPKSSHLYVDTTFNPD 444 (543)
T ss_dssp SSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-ECSCSCCCCEECCTTCCEEEECCTTCSS
T ss_pred CCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-EcCCCCceEEEcCCCCCcEEEecCCCCC
Confidence 11223 24443 665688998876 568999999875 233333 33345578999999877888765211
Q ss_pred ---CCeEEEEecC-CCCe-EEE-E------ecCCCCceEEEEeCCCCEEEEEEeC---CCCeEEEEEccCCceEEEEecC
Q psy5792 300 ---IPLIARAGLD-GKKQ-TIL-A------QEIIMPIKDITLDRKNKRVYWCYSV---GSNVLESMDYSGGSKMQLKLSS 364 (377)
Q Consensus 300 ---~~~I~r~~ld-G~~~-~~l-~------~~~~~~P~glalD~~~~~LYw~d~~---~~~~i~~~~~~G~~~~~~~~~~ 364 (377)
...|...+.+ ++.. +.+ + .+.-..+..+++.+.+..||++.+. ..+.|..+|.........+...
T Consensus 445 ~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 445 ARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp HHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred cccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 2488888876 3433 333 1 2223568889999999999998751 2488999888765555555566
Q ss_pred CCCCccc
Q psy5792 365 NIKNALL 371 (377)
Q Consensus 365 ~~~~p~~ 371 (377)
.+..|-+
T Consensus 525 ~~~~p~g 531 (543)
T 1nir_A 525 RLITPTG 531 (543)
T ss_dssp TCCSEEE
T ss_pred CccCCCe
Confidence 6777743
No 82
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.35 E-value=3.6e-09 Score=100.35 Aligned_cols=192 Identities=13% Similarity=0.065 Sum_probs=125.4
Q ss_pred CCeEEEEEcCCCCceeeEEEE--ecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC-CCCcEEEEeccccCCCCCCC
Q psy5792 159 GYDIMGIKYNKNESKVTQVLG--PLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD-GTGRENIIEYVETGDPTPVD 235 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~-G~~~~~i~~~~~~~~~~~~~ 235 (377)
.+.+..++++.... ....+. +......+.++++++.+++||.++...+.|+.++++ ....+.+... .. +....
T Consensus 118 ~g~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-~~--~~~g~ 193 (365)
T 1jof_A 118 AGYGNVFSVSETGK-LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSV-DA--PDPGD 193 (365)
T ss_dssp CCEEEEEEECTTCC-EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEE-EC--SSTTC
T ss_pred CceEEEEccCCCCc-CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeE-ec--CCCCC
Confidence 44577777753221 011111 112446799999999888999999878899999986 3232222110 00 01134
Q ss_pred CcceEEEeccCCeEEEEcCCCCEEEEEEcC---CCeE---EEEee--CCC---C-------CceeEE-EcCCCCeEEEEe
Q psy5792 236 QFTDIAVDWIAQNIYWSDPKENVIEVARLT---GQYR---YVLIS--GGV---D-------QPSALA-VDPESGYLFWSE 296 (377)
Q Consensus 236 ~p~~iavD~~~~~lYwtd~~~~~I~~~~~~---g~~~---~~l~~--~~~---~-------~P~~ia-vdp~~g~lywtd 296 (377)
.|.++++++.++.||+++...++|.+.+++ |+.. ..+.. .+. . .|.+++ ++|...+||.++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 699999999888999999888889888775 4432 11211 111 2 489999 999888999998
Q ss_pred cCCCC----eEEEEecC--CCCeEE--EEecCCCCceEEEEeC---CCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 297 SGKIP----LIARAGLD--GKKQTI--LAQEIIMPIKDITLDR---KNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 297 ~g~~~----~I~r~~ld--G~~~~~--l~~~~~~~P~glalD~---~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.+.+. .|...+++ |.-... +....-..|.++++++ .+++||.+.. ..++|...++++.
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~-~~~~v~v~~~~~~ 342 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD-QEGWLEIYRWKDE 342 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS-SSCEEEEEEEETT
T ss_pred CCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc-CCCeEEEEEEchh
Confidence 75321 67777664 332221 2222234688999998 6899999998 7888988888865
No 83
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.34 E-value=1.1e-09 Score=99.57 Aligned_cols=152 Identities=16% Similarity=0.055 Sum_probs=108.5
Q ss_pred eEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 187 AAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
+.|++++ +++||+++...+.+++++.+.. +.+... . .+...+.+|+-| ++.||.++ ..++|.+.++..
T Consensus 68 geGi~~~--g~~lyv~t~~~~~v~viD~~t~--~v~~~i--~---~g~~~g~glt~D--g~~l~vs~-gs~~l~viD~~t 135 (266)
T 2iwa_A 68 GEGLTLL--NEKLYQVVWLKNIGFIYDRRTL--SNIKNF--T---HQMKDGWGLATD--GKILYGSD-GTSILYEIDPHT 135 (266)
T ss_dssp EEEEEEE--TTEEEEEETTCSEEEEEETTTT--EEEEEE--E---CCSSSCCEEEEC--SSSEEEEC-SSSEEEEECTTT
T ss_pred eEEEEEe--CCEEEEEEecCCEEEEEECCCC--cEEEEE--E---CCCCCeEEEEEC--CCEEEEEC-CCCeEEEEECCC
Confidence 4567777 7899999999999999998732 222220 0 122234455555 88999999 578999999987
Q ss_pred CeEE-EE-eeC---CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-eEEEEecC------------CCCceEEE
Q psy5792 267 QYRY-VL-ISG---GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILAQEI------------IMPIKDIT 328 (377)
Q Consensus 267 ~~~~-~l-~~~---~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-~~~l~~~~------------~~~P~gla 328 (377)
.... .+ +.. .+..|++++.. +|.||.+.+. ...|.+++..... ...+-... ...|+||+
T Consensus 136 ~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~-~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa 212 (266)
T 2iwa_A 136 FKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ-TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIA 212 (266)
T ss_dssp CCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEE
T ss_pred CcEEEEEEECCCCcccccceeEEEE--CCEEEEecCC-CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEE
Confidence 5432 22 221 23457888876 6899999985 6899999986443 34443221 14789999
Q ss_pred EeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 329 LDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 329 lD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
+|+.+++||++.. ...+|+.+++..
T Consensus 213 ~~~~~~~lfVTgk-~~~~v~~i~l~~ 237 (266)
T 2iwa_A 213 WDQENKRIFVTGK-LWPKLFEIKLHL 237 (266)
T ss_dssp EETTTTEEEEEET-TCSEEEEEEEEE
T ss_pred EcCCCCEEEEECC-CCCeEEEEEEec
Confidence 9999999999999 999999999874
No 84
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.33 E-value=3.2e-10 Score=104.06 Aligned_cols=156 Identities=13% Similarity=0.163 Sum_probs=120.8
Q ss_pred CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEE
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVA 262 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~ 262 (377)
....+.++++|+.++.|||++...+.|+++++++. .+.+. .....|.+|++|+ .++||+++...++|.+.
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~--------~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM--------HPSHHQNGHCLNK-QGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE--------SSCSSEEEEEECT-TCCEEEEETTTTEEEEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE--------CCCCCcceeeECC-CCcEEEEecCCCeEEEE
Confidence 44568899999988889999999999999999976 44443 3456799999996 67899999888899999
Q ss_pred Ec-CCCeEEEEee-C--CCCCceeEEEcCCCCeEEEEec--CC--------------CCeEEEEecCCCCeEEEEecCCC
Q psy5792 263 RL-TGQYRYVLIS-G--GVDQPSALAVDPESGYLFWSES--GK--------------IPLIARAGLDGKKQTILAQEIIM 322 (377)
Q Consensus 263 ~~-~g~~~~~l~~-~--~~~~P~~iavdp~~g~lywtd~--g~--------------~~~I~r~~ldG~~~~~l~~~~~~ 322 (377)
++ +|+....... . ....|.++++|| +|.||++|. +. ...|++.+.+|. .+.+ ...+.
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~-~~~~~ 172 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAP-IRDRV 172 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEE-ECCCS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEe-ecCCC
Confidence 99 5655433211 1 245789999998 789999874 11 358999988844 3333 33478
Q ss_pred CceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 323 PIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 323 ~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.|+|+++++.++.| |++. ..++|..++++
T Consensus 173 ~~~gi~~s~dg~~l-v~~~-~~~~i~~~~~~ 201 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDT-GDNATHRYCLN 201 (296)
T ss_dssp SEEEEEECTTSCEE-EEET-TTTEEEEEEEC
T ss_pred CCccEEECCCCCEE-EEeC-CCCeEEEEEEC
Confidence 99999999877777 9999 99999999986
No 85
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=3.4e-09 Score=102.85 Aligned_cols=271 Identities=10% Similarity=0.058 Sum_probs=171.2
Q ss_pred CCCCeEEEEeCCC----CcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcC---------CCCceEEEc-C
Q psy5792 25 QSGPFVYGVKTLS----HSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDA---------NDGNIRSIN-L 86 (377)
Q Consensus 25 ~~~~~ly~~d~~~----~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~---------~~~~I~~~~-~ 86 (377)
+...++|+++... +.|..+|++.. ..+| .....| +|++ .+.+||+++. ..+.|..+| .
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I---~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT---DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE---EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE---ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 4557899999976 79999999887 5555 345578 9999 6778999986 356799999 6
Q ss_pred CCCceEEEecC--------CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC
Q psy5792 87 DGSNSTVLRNN--------AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS 158 (377)
Q Consensus 87 ~g~~~~~~~~~--------~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~ 158 (377)
+++....+.-. ..|.++.+ +++. .++++++..
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~-spDG---------------------------------------k~lyV~n~~ 197 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNAL-TPDN---------------------------------------KNLLFYQFS 197 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEE-CTTS---------------------------------------SEEEEEECS
T ss_pred CCcEEEEEECCCccccccCCCcceEEE-cCCC---------------------------------------CEEEEEecC
Confidence 77765554321 22666665 3332 257777743
Q ss_pred -CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCc
Q psy5792 159 -GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 159 -~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p 237 (377)
.+.|..|++..... . ..+++.+. ..+ .+.+.+.|++...++++..++........... .. ..--..|
T Consensus 198 ~~~~VsVID~~t~kv--v-~~I~v~g~---~~~--~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~---~~-~~v~~~p 265 (426)
T 3c75_H 198 PAPAVGVVDLEGKTF--D-RMLDVPDC---YHI--FPASPTVFYMNCRDGSLARVDFADGETKVTNT---EV-FHTEDEL 265 (426)
T ss_dssp SSCEEEEEETTTTEE--E-EEEECCSE---EEE--EEEETTEEEEEETTSSEEEEECCTTCCEEEEC---CC-CSCTTSC
T ss_pred CCCeEEEEECCCCeE--E-EEEEcCCc---eee--ccCCCcEEEEEcCCCCEEEEECCCCcEEEEee---ee-eccCCCc
Confidence 45699998876633 1 12333221 122 22234566666666666666663222111100 00 0011123
Q ss_pred c--eEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee------CC---CCCcee---EEEcCCCCeEEEEecC-----
Q psy5792 238 T--DIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS------GG---VDQPSA---LAVDPESGYLFWSESG----- 298 (377)
Q Consensus 238 ~--~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~------~~---~~~P~~---iavdp~~g~lywtd~g----- 298 (377)
. .+++++..+.+|+... .+++.++++.+....++-. .. ...|.+ ++++|..++||+++..
T Consensus 266 ~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gt 344 (426)
T 3c75_H 266 LINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWK 344 (426)
T ss_dssp BCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTC
T ss_pred eeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccccc
Confidence 2 3466777788888765 4799999998765433211 00 123555 8999999999999741
Q ss_pred ---CCCeEEEEecCCCCe-EEEEecCCCCceEEEEeCCCC-EEEEEEeCCCCeEEEEEccCC
Q psy5792 299 ---KIPLIARAGLDGKKQ-TILAQEIIMPIKDITLDRKNK-RVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 299 ---~~~~I~r~~ldG~~~-~~l~~~~~~~P~glalD~~~~-~LYw~d~~~~~~i~~~~~~G~ 355 (377)
....|..+++.-... ..+--. ..|.+|+++..++ +||.+.. ..+.|..+|....
T Consensus 345 hk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~-~s~~VsVID~~t~ 403 (426)
T 3c75_H 345 HKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSA-GTQTLHIYDAATG 403 (426)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEET-TTTEEEEEETTTC
T ss_pred ccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcC-CCCeEEEEECCCC
Confidence 124688888875443 333222 3699999998888 9999998 8999999998744
No 86
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.26 E-value=4.9e-09 Score=94.62 Aligned_cols=174 Identities=13% Similarity=0.130 Sum_probs=127.4
Q ss_pred ecCCC-CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCE
Q psy5792 180 PLSKV-SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENV 258 (377)
Q Consensus 180 ~~~~~-~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~ 258 (377)
|+.+. .++.|+++++.++.||.+....++|++++++|...+.+.. .+...++|||++. .+.+++++...++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l-------~g~~D~EGIa~~~-~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL-------DFVKDLETIEYIG-DNQFVISDERDYA 92 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC-------SSCSSEEEEEECS-TTEEEEEETTTTE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec-------CCCCChHHeEEeC-CCEEEEEECCCCc
Confidence 44544 5799999999899999866568899999999766555544 4567899999994 5667788888899
Q ss_pred EEEEEcCCCeE-E--EEeeCCC-CCc-----eeEEEcCCCCeEEEEecCCCCeEEEEe--cCCCCeEEEEe------cCC
Q psy5792 259 IEVARLTGQYR-Y--VLISGGV-DQP-----SALAVDPESGYLFWSESGKIPLIARAG--LDGKKQTILAQ------EII 321 (377)
Q Consensus 259 I~~~~~~g~~~-~--~l~~~~~-~~P-----~~iavdp~~g~lywtd~g~~~~I~r~~--ldG~~~~~l~~------~~~ 321 (377)
+.++.++.... . ......+ ..| .|||.||.++.||.+.......|++.+ +.+...+++-. ..+
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccccc
Confidence 99988765431 1 1111112 335 899999998899999865333888887 22223333311 125
Q ss_pred CCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEEEe
Q psy5792 322 MPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQLKL 362 (377)
Q Consensus 322 ~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~~~ 362 (377)
..+.+|++|+.+++||+... ..+.+..++.+|.-+..+.+
T Consensus 173 ~d~S~l~~dp~tg~lliLS~-~s~~L~~~d~~g~~~~~~~L 212 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSH-ESRALQEVTLVGEVIGEMSL 212 (255)
T ss_dssp SCCCEEEEETTTTEEEEEET-TTTEEEEECTTCCEEEEEEC
T ss_pred CCceeEEEcCCCCeEEEEEC-CCCeEEEEcCCCCEEEEEEc
Confidence 67999999999999999999 99999999999864444443
No 87
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.25 E-value=2e-08 Score=95.98 Aligned_cols=276 Identities=12% Similarity=0.086 Sum_probs=166.5
Q ss_pred ccccCCCCeEEEEeCC----CCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcC---------CCCceEE
Q psy5792 21 TLKPQSGPFVYGVKTL----SHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDA---------NDGNIRS 83 (377)
Q Consensus 21 ~~~d~~~~~ly~~d~~----~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~---------~~~~I~~ 83 (377)
.+-++.+.++|+++.. .+.|..+|.+.. ..++ .....|. |++ .+.++|++++ ..+.|..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I---~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI---DGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE---EECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEE---ECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 4556788899999987 789999999877 5555 3345574 888 6778999985 2467999
Q ss_pred Ec-CCCCceEEEecC--------CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEE
Q psy5792 84 IN-LDGSNSTVLRNN--------AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILF 154 (377)
Q Consensus 84 ~~-~~g~~~~~~~~~--------~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~ 154 (377)
+| .+++....+... ..|.++.+ +++. .++++
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~-spDG---------------------------------------k~lyV 153 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSL-TPDG---------------------------------------KTLLF 153 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEE-CTTS---------------------------------------SEEEE
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEE-cCCC---------------------------------------CEEEE
Confidence 99 667665554321 13666665 3332 25777
Q ss_pred EeCC-CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCC
Q psy5792 155 SVNS-GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTP 233 (377)
Q Consensus 155 s~~~-~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~ 233 (377)
++.. .+.|..+++..... ... +++.+ .. ..+.. +.+.|++...++++..+.+....... ....... ..
T Consensus 154 an~~~~~~VsVID~~t~~v--v~t-I~v~g---~~-~~~P~-g~~~~~~~~~DG~~~~v~~~~~g~v~-~~~~~~~--~~ 222 (386)
T 3sjl_D 154 YQFSPAPAVGVVDLEGKAF--KRM-LDVPD---CY-HIFPT-APDTFFMHCRDGSLAKVAFGTEGTPE-ITHTEVF--HP 222 (386)
T ss_dssp EECSSSCEEEEEETTTTEE--EEE-EECCS---EE-EEEEE-ETTEEEEEETTSCEEEEECCSSSCCE-EEECCCC--SC
T ss_pred EEcCCCCeEEEEECCCCcE--EEE-EECCC---cc-eeecC-CCceeEEECCCCCEEEEECCCCCeEE-Eeeccee--cc
Confidence 7743 45699998877643 222 23322 11 11222 23333344455666666654322111 1100000 00
Q ss_pred CCCcc--eEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC---------CCCCce---eEEEcCCCCeEEEEec-C
Q psy5792 234 VDQFT--DIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG---------GVDQPS---ALAVDPESGYLFWSES-G 298 (377)
Q Consensus 234 ~~~p~--~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~---------~~~~P~---~iavdp~~g~lywtd~-g 298 (377)
-..|. ..+++...++++|... .+++.++++.+...+++-.- ....|. .+++|+..++||++.. +
T Consensus 223 ~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 223 EDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp TTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred ccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 11222 2466655677766544 47899999987654332110 011243 4889999999999863 1
Q ss_pred -------CCCeEEEEecCCCCe-EEEEecCCCCceEEEEeCCCC-EEEEEEeCCCCeEEEEEccCC
Q psy5792 299 -------KIPLIARAGLDGKKQ-TILAQEIIMPIKDITLDRKNK-RVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 299 -------~~~~I~r~~ldG~~~-~~l~~~~~~~P~glalD~~~~-~LYw~d~~~~~~i~~~~~~G~ 355 (377)
...+|..+++....+ ..+... ..|.+|+++...+ +||.+.. ..+.|..++...+
T Consensus 302 ~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~-~~~~VsViD~~t~ 364 (386)
T 3sjl_D 302 DEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALST-GDKTLYIHDAESG 364 (386)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEET-TTTEEEEEETTTC
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcC-CCCeEEEEECCCC
Confidence 125788888865443 333322 3688999988775 7999998 8999999998743
No 88
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.24 E-value=1.9e-08 Score=92.81 Aligned_cols=266 Identities=7% Similarity=-0.040 Sum_probs=168.8
Q ss_pred eEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCC-ceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCceEEEecCC----
Q psy5792 29 FVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAA-QVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNA---- 98 (377)
Q Consensus 29 ~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~-~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~---- 98 (377)
.++++....+.|..+|+... ..++. ..... .|.++++ .+.++|+++...+.|..++ .+|+....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 45677778899999998765 44443 12111 5889999 4458999998888999999 6676655444221
Q ss_pred --CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeC-----------CCCeEEEE
Q psy5792 99 --GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVN-----------SGYDIMGI 165 (377)
Q Consensus 99 --~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~-----------~~~~I~~~ 165 (377)
.|.++++ +++. ..++++.. ..+.|..+
T Consensus 81 ~~~~~~~~~-s~dg---------------------------------------~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 81 VKSLFGAAL-SPDG---------------------------------------KTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp EECTTCEEE-CTTS---------------------------------------SEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred cccccceEE-CCCC---------------------------------------CEEEEEecccccccccccccCceEEEE
Confidence 2444433 2221 24666531 12348888
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
++..... +..+.....+.++++++.++.||++ ++.|+.+++........+. .. ..+..+++.+.
T Consensus 121 d~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~-------~~-~~~~~~~~s~d 184 (337)
T 1pby_B 121 DAETLSR-----RKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKP-------IQ-SWEAETYAQPD 184 (337)
T ss_dssp ETTTTEE-----EEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEEC-------ST-TTTTTTBCCCB
T ss_pred ECCCCcE-----EEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeee-------cc-ccCCCceeCCC
Confidence 8865422 2222233457788899888889998 4789999987543332232 11 11222345555
Q ss_pred CCeEEEEcCCCC-----------------------EEEEEEcCCCeEEEE-eeCCCCCceeEEEcCCCCeEEEEecCCCC
Q psy5792 246 AQNIYWSDPKEN-----------------------VIEVARLTGQYRYVL-ISGGVDQPSALAVDPESGYLFWSESGKIP 301 (377)
Q Consensus 246 ~~~lYwtd~~~~-----------------------~I~~~~~~g~~~~~l-~~~~~~~P~~iavdp~~g~lywtd~g~~~ 301 (377)
+..||++....+ .|.+.++.......+ .......|.+++++|...+||.++ .
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----~ 260 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY----N 260 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE----S
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeC----C
Confidence 666666654433 467788876544322 222345788999999888999883 5
Q ss_pred eEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceE
Q psy5792 302 LIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKM 358 (377)
Q Consensus 302 ~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~ 358 (377)
.|...+++.......+.. -..|.++++++.+++||.+ . ..+.|..++...+...
T Consensus 261 ~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-~-~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 261 VLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLG-G-ALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEE-S-BSSEEEEEETTTCCEE
T ss_pred eEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEE-c-CCCcEEEEECcCCcEE
Confidence 888888875544333433 3578999999888889887 5 5789999998755433
No 89
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.24 E-value=1.1e-07 Score=90.75 Aligned_cols=275 Identities=12% Similarity=0.037 Sum_probs=166.7
Q ss_pred ccCCCCeEEEEeC-CCC---cEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcC---------CCCceEEEc
Q psy5792 23 KPQSGPFVYGVKT-LSH---SLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDA---------NDGNIRSIN 85 (377)
Q Consensus 23 ~d~~~~~ly~~d~-~~~---~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~---------~~~~I~~~~ 85 (377)
.++...++|+++. ..+ .|..+|++.. ..++ +....| ++++ .+.+||+++. ..+.|..+|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i---~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHV---NGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEe---cCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 3455678999997 555 7899998766 4444 445568 9999 6779999984 246688888
Q ss_pred -CCCCceEEEecC--------CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe
Q psy5792 86 -LDGSNSTVLRNN--------AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV 156 (377)
Q Consensus 86 -~~g~~~~~~~~~--------~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~ 156 (377)
.+++....+.-. ..|.++.+ +++. .+|++++
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~-spDG---------------------------------------~~l~v~n 143 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNAN-TPNN---------------------------------------ADLLFFQ 143 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEE-CCCC---------------------------------------CEEEEEe
Confidence 555554443321 12555554 3332 2677776
Q ss_pred CC-CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCC
Q psy5792 157 NS-GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVD 235 (377)
Q Consensus 157 ~~-~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~ 235 (377)
.. .+.|..++ ..... ...++++ +..+.+.+...+.|++....+++..++..|.....+.. ... ..-.
T Consensus 144 ~~~~~~v~viD-~t~~~--~~~~i~~-----~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~--~~~--~~~~ 211 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSS--DDQLLSS-----PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLV--GAM--LTAA 211 (373)
T ss_pred cCCCCeEEEEE-CCCCE--EeEEcCC-----CceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEec--ccc--ccCC
Confidence 43 34688888 65533 1111222 12233445567788888888888888883322111110 000 0001
Q ss_pred Cc--ceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee---------CCCCCcee---EEEcCCCCeEEEEecC---
Q psy5792 236 QF--TDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS---------GGVDQPSA---LAVDPESGYLFWSESG--- 298 (377)
Q Consensus 236 ~p--~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~---------~~~~~P~~---iavdp~~g~lywtd~g--- 298 (377)
.| ...+++...+.+||.. ..+++.++++.+...+++-. .....|.+ ++++|..++||++...
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 212 QNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred cceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 12 1233444466777766 45689999987653322111 01123555 8999999999998531
Q ss_pred -----CCCeEEEEecCCCCe-EEEEecCCCCceEEEEeCCCC-EEEEEEeCCCCeEEEEEccCCce
Q psy5792 299 -----KIPLIARAGLDGKKQ-TILAQEIIMPIKDITLDRKNK-RVYWCYSVGSNVLESMDYSGGSK 357 (377)
Q Consensus 299 -----~~~~I~r~~ldG~~~-~~l~~~~~~~P~glalD~~~~-~LYw~d~~~~~~i~~~~~~G~~~ 357 (377)
....|..+++..... ..+ .. -..|.+++++..++ +||.+.. ..+.|..++......
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv~~i-~~-g~~p~~i~~s~Dg~~~l~v~~~-~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTSSQI-SL-GHDVDAISVAQDGGPDLYALSA-GTEVLHIYDAGAGDQ 353 (373)
T ss_pred ccccCCCCeEEEEECCCCEEEEEE-EC-CCCcCeEEECCCCCeEEEEEcC-CCCeEEEEECCCCCE
Confidence 135799998875443 344 32 24699999998888 7888887 789999999885433
No 90
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.24 E-value=2.4e-09 Score=98.40 Aligned_cols=164 Identities=16% Similarity=0.222 Sum_probs=114.9
Q ss_pred ceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEE-EeccccCCCCCCCCcceEEEeccCCeEEEEcCCC--------
Q psy5792 186 LAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENI-IEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE-------- 256 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i-~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~-------- 256 (377)
.+.+++++..+++||+++.. +.|++++.+| ..+.+ ... ........|.+|++|+ .++||+++...
T Consensus 72 ~~~~i~~~~~~g~l~v~~~~-~~l~~~d~~g-~~~~~~~~~---~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 72 IPAGCQCDRDANQLFVADMR-LGLLVVQTDG-TFEEIAKKD---SEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYT 145 (314)
T ss_dssp CEEEEEECSSSSEEEEEETT-TEEEEEETTS-CEEECCSBC---TTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCC
T ss_pred CCceEEEecCCCcEEEEECC-CCEEEEeCCC-CEEEEEecc---CCCccccCCcCEEECC-CCCEEEEecCccccccccc
Confidence 47788888754899999864 4899999884 33333 220 0001234599999996 67899998764
Q ss_pred -------CEEEEEEcCCCeEEEEeeCCCCCceeEEEc----CCCCeEEEEecCCCCeEEEEecCCCCe----EEEEec--
Q psy5792 257 -------NVIEVARLTGQYRYVLISGGVDQPSALAVD----PESGYLFWSESGKIPLIARAGLDGKKQ----TILAQE-- 319 (377)
Q Consensus 257 -------~~I~~~~~~g~~~~~l~~~~~~~P~~iavd----p~~g~lywtd~g~~~~I~r~~ldG~~~----~~l~~~-- 319 (377)
+.|.+.+.+|+... +.. ....|.+++++ |.++.||+++.. ..+|.+.++++.+. +.+..-
T Consensus 146 ~~~~~~~~~l~~~~~~g~~~~-~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~-~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTDGQMIQ-VDT-AFQFPNGIAVRHMNDGRPYQLIVAETP-TKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp BTTSSSCEEEEEECTTSCEEE-EEE-EESSEEEEEEEECTTSCEEEEEEEETT-TTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccccCCCCeEEEECCCCCEEE-ecc-CCCCcceEEEecccCCCCCEEEEEECC-CCeEEEEECCCCCccccceEEEECCC
Confidence 68999998866543 333 35679999999 866689999975 58999998763221 122221
Q ss_pred CC-CCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc-CCceEEE
Q psy5792 320 II-MPIKDITLDRKNKRVYWCYSVGSNVLESMDYS-GGSKMQL 360 (377)
Q Consensus 320 ~~-~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~-G~~~~~~ 360 (377)
.. ..|.++++|. +++||+++. ..+.|.+++.+ |.....+
T Consensus 223 ~~~~~p~~i~~d~-~G~l~v~~~-~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 223 THEGGADGMDFDE-DNNLLVANW-GSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp CSSCEEEEEEEBT-TCCEEEEEE-TTTEEEEECTTCBSCSEEE
T ss_pred CCCCCCCceEECC-CCCEEEEEc-CCCEEEEEcCCCCcEeEEE
Confidence 11 5799999995 679999999 88999999988 5433433
No 91
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=1.1e-07 Score=95.75 Aligned_cols=274 Identities=9% Similarity=-0.007 Sum_probs=179.4
Q ss_pred CCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcC---CCCceEEEecCCC
Q psy5792 27 GPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINL---DGSNSTVLRNNAG 99 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~---~g~~~~~~~~~~~ 99 (377)
..++|++....+.|..+|.+.. ..++ .....|.++++ .+.++|+++. .+.|..+|. +++....+..+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i---~~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G~~ 241 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVL---DTGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIGSE 241 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEE---ECSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECCSE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEE---eCCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecCCC
Confidence 4689999999999999999877 4455 44557889999 5678999974 578999994 5655555555445
Q ss_pred ceeEEeee---cCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeE
Q psy5792 100 ISDFILFS---VNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQ 176 (377)
Q Consensus 100 p~~i~v~~---~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~ 176 (377)
|.++.+.. ++.+ ++++++...+.+..++...... ..
T Consensus 242 P~~ia~s~~~~pDGk---------------------------------------~l~v~n~~~~~v~ViD~~t~~~--~~ 280 (567)
T 1qks_A 242 ARSIETSKMEGWEDK---------------------------------------YAIAGAYWPPQYVIMDGETLEP--KK 280 (567)
T ss_dssp EEEEEECCSTTCTTT---------------------------------------EEEEEEEETTEEEEEETTTCCE--EE
T ss_pred CceeEEccccCCCCC---------------------------------------EEEEEEccCCeEEEEECCCCcE--EE
Confidence 88888742 3332 5777765555687777654432 11
Q ss_pred EEEecCC----------CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC
Q psy5792 177 VLGPLSK----------VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA 246 (377)
Q Consensus 177 ~~~~~~~----------~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~ 246 (377)
.+++.+ ..++.++........++++....++|..++........+... ..-..|.++++|+.+
T Consensus 281 -~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i------~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 281 -IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI------SAERFLHDGGLDGSH 353 (567)
T ss_dssp -EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE------ECCSSEEEEEECTTS
T ss_pred -EEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee------eccccccCceECCCC
Confidence 122211 125667776666667777777789999998864322222210 122358899999988
Q ss_pred CeEEEEcCCCCEEEEEEcCCCeEEEEeeC--CCCCc-eeEE-EcCCCCeEEEEecCCCCeEEEEecCCCC--------eE
Q psy5792 247 QNIYWSDPKENVIEVARLTGQYRYVLISG--GVDQP-SALA-VDPESGYLFWSESGKIPLIARAGLDGKK--------QT 314 (377)
Q Consensus 247 ~~lYwtd~~~~~I~~~~~~g~~~~~l~~~--~~~~P-~~ia-vdp~~g~lywtd~g~~~~I~r~~ldG~~--------~~ 314 (377)
+.+|.++...++|.+.++........+.. ...+| ++.. ++|..+.+|.+.......|..++.+... .+
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 99999999899999999987654444443 23444 4665 5887788887764225789999887521 22
Q ss_pred EEEecCCCCceEEEEeCCCCEEEEEEeCC-----CCeEEEEEcc
Q psy5792 315 ILAQEIIMPIKDITLDRKNKRVYWCYSVG-----SNVLESMDYS 353 (377)
Q Consensus 315 ~l~~~~~~~P~glalD~~~~~LYw~d~~~-----~~~i~~~~~~ 353 (377)
.+-... ..+..+...+.+.+||+..... .+.|..++.+
T Consensus 434 ~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~ 476 (567)
T 1qks_A 434 SFPALG-GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIK 476 (567)
T ss_dssp EEECSC-SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGG
T ss_pred EEecCC-CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECC
Confidence 222211 2334577777667777655301 3478888876
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.21 E-value=7.6e-08 Score=96.57 Aligned_cols=278 Identities=12% Similarity=0.009 Sum_probs=183.3
Q ss_pred cccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcC---CCCceEEE
Q psy5792 22 LKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINL---DGSNSTVL 94 (377)
Q Consensus 22 ~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~---~g~~~~~~ 94 (377)
++++ ++++|++....+.|..+|.+.. ..++- .+. .|+++++ .+.+||.++.. +.|..++. +++....+
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~--~g~-~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVID--TGY-AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEE--CST-TEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEE
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEe--cCc-ccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEE
Confidence 4665 4589999999999999998766 55553 222 3899988 66789999976 88999986 44444555
Q ss_pred ecCCCceeEEeeec----CCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 95 RNNAGISDFILFSV----NSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 95 ~~~~~p~~i~v~~~----~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
..+..|.++++ ++ +.+ ++++++...+.|..++....
T Consensus 219 ~~g~~p~~va~-sp~~~~dg~---------------------------------------~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 219 KIGIEARSVES-SKFKGYEDR---------------------------------------YTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp ECCSEEEEEEE-CCSTTCTTT---------------------------------------EEEEEEEESSEEEEEETTTC
T ss_pred ecCCCcceEEe-CCCcCCCCC---------------------------------------EEEEEEccCCeEEEEecccc
Confidence 54334888875 44 332 46666643445887876554
Q ss_pred CceeeEEEEecC----------CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC-cEE-EEeccccCCCCCCCCcc
Q psy5792 171 ESKVTQVLGPLS----------KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG-REN-IIEYVETGDPTPVDQFT 238 (377)
Q Consensus 171 ~~~~~~~~~~~~----------~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~-~~~-i~~~~~~~~~~~~~~p~ 238 (377)
.. .. .++.. ...++.++.+.+.+..+|++....++|..++..... ... .+. .-..|.
T Consensus 259 ~~--~~-~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~--------~~~~~~ 327 (543)
T 1nir_A 259 EP--KQ-IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--------AAPFLH 327 (543)
T ss_dssp CE--EE-EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--------CCSSCC
T ss_pred cc--ce-eecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--------cCcCcc
Confidence 33 12 22221 123678899998889999999999999999986432 221 122 224599
Q ss_pred eEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC-CCCCc-eeEE-EcCCCCeEEEEecCCCCeEEEEecCC-----
Q psy5792 239 DIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG-GVDQP-SALA-VDPESGYLFWSESGKIPLIARAGLDG----- 310 (377)
Q Consensus 239 ~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~-~~~~P-~~ia-vdp~~g~lywtd~g~~~~I~r~~ldG----- 310 (377)
++++++.++.+|.++...++|.+.++........+.. ...+| ++.. ++|..|.+|.+.......|...+++.
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~ 407 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ 407 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCch
Confidence 9999998888999998889999999987655444443 22333 3554 47877999988752247888888774
Q ss_pred ---CCeEEEEecCCCCceEEEEeCCCCEEEEEEeCC-----CCeEEEEEccCCc
Q psy5792 311 ---KKQTILAQEIIMPIKDITLDRKNKRVYWCYSVG-----SNVLESMDYSGGS 356 (377)
Q Consensus 311 ---~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~-----~~~i~~~~~~G~~ 356 (377)
+..+++-.. -..+..+++.+.+++||...... .++|..++.+...
T Consensus 408 ~~~~~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 408 YAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp TBTSEEEEEECS-CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred hcCeEEEEEEcC-CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 222333221 13456788887777777654101 3478888876443
No 93
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.19 E-value=3.4e-09 Score=98.43 Aligned_cols=247 Identities=11% Similarity=0.061 Sum_probs=156.7
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCC-------CceEEEEE----ECCeEEEE-cCCCCce
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDA-------AQVVAAVF----YKGRIIYS-DANDGNI 81 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~-------~~p~~lav----~~~~ly~t-d~~~~~I 81 (377)
--+|.|..-|...+++|+.+...+.|.++++++. ...+. .+.+ .+|.||.+ ..++|++. |.. .
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~--~- 87 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA--K- 87 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET--T-
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEEccc--c-
Confidence 3589999999999999999999999999999966 44442 2332 37899999 45678773 310 0
Q ss_pred EEEcCCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCe
Q psy5792 82 RSINLDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYD 161 (377)
Q Consensus 82 ~~~~~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~ 161 (377)
..+..|+.. .+.. .
T Consensus 88 -af~~~g~~~------~g~~-----------------------------------------------------------~ 101 (334)
T 2p9w_A 88 -SFNFADQSS------HGAS-----------------------------------------------------------S 101 (334)
T ss_dssp -TTCTTSCCS------SSCC-----------------------------------------------------------E
T ss_pred -ccccccccc------CCCC-----------------------------------------------------------E
Confidence 000111110 0000 1
Q ss_pred EEEEEcC----CCCceeeEEEEecC------------CCCceEEEEEECCCCEEEEEEcCC-CcEEEEEcCCCCcEEEEe
Q psy5792 162 IMGIKYN----KNESKVTQVLGPLS------------KVSLAAKVDFHAAEDYIYWVDIDH-GTISRTHRDGTGRENIIE 224 (377)
Q Consensus 162 I~~~~l~----~~~~~~~~~~~~~~------------~~~~~~~l~~d~~~~~ly~sd~~~-~~I~~~~~~G~~~~~i~~ 224 (377)
+.++++. +... ....+. ....+..+++|. ++++|+++... +.|+|++.+|........
T Consensus 102 v~~~Dl~~~~tg~~~----~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 102 FHSFNLPLSENSKPV----WSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp EEEEESSCCTTCCCS----EEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEE
T ss_pred EEEEcCCcCCCCCEE----EEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeee
Confidence 4444444 1111 111111 112477899997 79999999988 999999999985544432
Q ss_pred ccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE-EEEee--C---CCCCceeE-EEcCCCCeE-EEEe
Q psy5792 225 YVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR-YVLIS--G---GVDQPSAL-AVDPESGYL-FWSE 296 (377)
Q Consensus 225 ~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~-~~l~~--~---~~~~P~~i-avdp~~g~l-ywtd 296 (377)
. ..-......+.||++++.+..|+..+. .++|.++++....+ .+-+. . .+..|.+| ++.. +|.+ ++++
T Consensus 177 ~--~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~-~G~vllV~~ 252 (334)
T 2p9w_A 177 E--SGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV-GNESVLVGA 252 (334)
T ss_dssp C--CCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE-TTEEEEEEE
T ss_pred c--CCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCccccccccc-CCEEEEEEc
Confidence 0 100112334889999998888888888 89999999984332 12122 1 36778995 6664 5555 9998
Q ss_pred cCCCCeEEEEecCCCCeE-EEEec---CCCCceEEEEe-----CCCCEEEEEEeCCC
Q psy5792 297 SGKIPLIARAGLDGKKQT-ILAQE---IIMPIKDITLD-----RKNKRVYWCYSVGS 344 (377)
Q Consensus 297 ~g~~~~I~r~~ldG~~~~-~l~~~---~~~~P~glalD-----~~~~~LYw~d~~~~ 344 (377)
.. +..+...+.|| .++ .+... .+. +.|++.+ ..+++||.++. ..
T Consensus 253 ~~-~~~~~l~S~Dg-W~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~-~f 305 (334)
T 2p9w_A 253 RA-PYAISFRSWDN-WKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSA-FF 305 (334)
T ss_dssp ET-TEEEEEECSST-TSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEEC-CG
T ss_pred CC-CCEEEEECCCC-cceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEee-ec
Confidence 64 45666677787 433 22221 233 7899988 45799999997 43
No 94
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.17 E-value=7.2e-08 Score=86.75 Aligned_cols=150 Identities=12% Similarity=0.048 Sum_probs=104.8
Q ss_pred eEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 187 AAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
..|++++ +++||.++...+.+++++++.-....-+. .. ..+.|++-| ++.||.+|. .++|...++..
T Consensus 89 geGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~-------~~-~eG~glt~d--g~~L~~SdG-s~~i~~iDp~T 155 (262)
T 3nol_A 89 GEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFN-------YD-GEGWGLTHN--DQYLIMSDG-TPVLRFLDPES 155 (262)
T ss_dssp EEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEE-------CS-SCCCCEEEC--SSCEEECCS-SSEEEEECTTT
T ss_pred eeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEE-------CC-CCceEEecC--CCEEEEECC-CCeEEEEcCCC
Confidence 4556666 78999999999999999987433222222 11 256677766 789999996 68999999986
Q ss_pred Ce-EEEE-eeC---CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-eEEEEecC-----------CCCceEEEE
Q psy5792 267 QY-RYVL-ISG---GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILAQEI-----------IMPIKDITL 329 (377)
Q Consensus 267 ~~-~~~l-~~~---~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-~~~l~~~~-----------~~~P~glal 329 (377)
.. ...+ +.. ....++.+.. .+|.||...|. ...|.+++..-.. ...+-... ..-|+|||+
T Consensus 156 ~~v~~~I~V~~~g~~~~~lNELe~--~~G~lyan~w~-~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~ 232 (262)
T 3nol_A 156 LTPVRTITVTAHGEELPELNELEW--VDGEIFANVWQ-TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW 232 (262)
T ss_dssp CSEEEEEECEETTEECCCEEEEEE--ETTEEEEEETT-SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred CeEEEEEEeccCCccccccceeEE--ECCEEEEEEcc-CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEE
Confidence 43 3222 221 1234455655 37899999985 6899999875433 33333221 236899999
Q ss_pred eCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 330 DRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 330 D~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
|+.+++||++-. .=.+++.+.+.
T Consensus 233 dp~~~~lfVTGK-~Wp~~~ev~~~ 255 (262)
T 3nol_A 233 DKEHHRLFVTGK-LWPKVFEITLT 255 (262)
T ss_dssp ETTTTEEEEEET-TCSEEEEEEEE
T ss_pred cCCCCEEEEECC-CCCceEEEEEe
Confidence 999999999998 77888888764
No 95
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=1.3e-08 Score=96.67 Aligned_cols=270 Identities=10% Similarity=0.016 Sum_probs=150.4
Q ss_pred CcCCccccccCCCCeEEEEeC---------CCCcEEEEEcCCc--EEEEEeCC----CCCceEEEEE--ECCeEEEEcCC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKT---------LSHSLHYVNIEVK--VAKVVSMP----DAAQVVAAVF--YKGRIIYSDAN 77 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~---------~~~~I~~~~~dG~--~~~i~~~~----~~~~p~~lav--~~~~ly~td~~ 77 (377)
...| ++++++++++||.++. ..+.|..+|+... ..++-... ....|.+|++ .+.+||+++..
T Consensus 50 g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~ 128 (361)
T 2oiz_A 50 AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS 128 (361)
T ss_dssp CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES
T ss_pred CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC
Confidence 4578 9999999999999974 2456999998765 55553111 2457899999 67799999876
Q ss_pred -CCceEEEc-CCCCceEE-EecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEE
Q psy5792 78 -DGNIRSIN-LDGSNSTV-LRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILF 154 (377)
Q Consensus 78 -~~~I~~~~-~~g~~~~~-~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~ 154 (377)
.+.|..++ .+++.... +... +..++.++.... ..++
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~----------------------------------------~~~~ 167 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTAAA-GCWSVIPQPNRP----------------------------------------RSFM 167 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGT-TEEEEEECTTSS----------------------------------------SEEE
T ss_pred CCCeEEEEECCCCcEEEEEecCC-CcceeEEcCCCC----------------------------------------eeEE
Confidence 67899999 55544433 2211 111222211110 0111
Q ss_pred EeCCCCeEEEEEcCCCCceeeEEE---EecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC--
Q psy5792 155 SVNSGYDIMGIKYNKNESKVTQVL---GPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG-- 229 (377)
Q Consensus 155 s~~~~~~I~~~~l~~~~~~~~~~~---~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~-- 229 (377)
+....|.+..++++..+.. .... ..+.....+..+...+....+++... .+.|+.+++.+.....+.......
T Consensus 168 ~~~~dg~~~~v~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKV-ASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSY-YGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EEETTSSEEEEEECTTSSE-EEEEECCCCSCTTTSCBCSCCEECSSEEEEEBT-TSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred EECCCCcEEEEEECCCCcE-eeeccccceEcCCCCceEEEecccCCEEEEEeC-CCeEEEEEecCCCceecccccccCcc
Confidence 2111223444444332110 0000 00111112222222222456666653 467888887654333221100000
Q ss_pred CCCCCCCcce---EEEeccCCeEEEEcC----------CCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEe
Q psy5792 230 DPTPVDQFTD---IAVDWIAQNIYWSDP----------KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 296 (377)
Q Consensus 230 ~~~~~~~p~~---iavD~~~~~lYwtd~----------~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd 296 (377)
.......|.+ +++++.++.+|++.. ..++|.+.++.......-+..+. |.+|+++|...+||.+.
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEEC
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeC
Confidence 0000012444 999988899999864 13589999998765443344333 99999999999999887
Q ss_pred cCCCCeEEEEecCCCCeEEEEe--cCCCCceEEEEeCCC
Q psy5792 297 SGKIPLIARAGLDGKKQTILAQ--EIIMPIKDITLDRKN 333 (377)
Q Consensus 297 ~g~~~~I~r~~ldG~~~~~l~~--~~~~~P~glalD~~~ 333 (377)
. ..|...++.....+.+-. ..=..|.++++++.+
T Consensus 324 ~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 324 G---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp S---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred C---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 4 678888776441122222 213579999998654
No 96
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.16 E-value=9.5e-09 Score=92.52 Aligned_cols=191 Identities=12% Similarity=0.059 Sum_probs=128.6
Q ss_pred ccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEe
Q psy5792 19 ASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLR 95 (377)
Q Consensus 19 ~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~ 95 (377)
.|+.++ +++||.+....++|.++|++.. .++++ .......||++.+++||..+|..+.+.++| .+++.
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l--~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~----- 128 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMER--LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR----- 128 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEE--CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE-----
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEEC--CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE-----
Confidence 588877 4799999999999999999765 44444 333334568999999999999999999888 44433
Q ss_pred cCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceee
Q psy5792 96 NNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVT 175 (377)
Q Consensus 96 ~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~ 175 (377)
+..+...+
T Consensus 129 ------------------------------------------------------------------~~ti~~~~------ 136 (268)
T 3nok_A 129 ------------------------------------------------------------------ERTTRYSG------ 136 (268)
T ss_dssp ------------------------------------------------------------------EEEEECSS------
T ss_pred ------------------------------------------------------------------EEEEeCCC------
Confidence 23333221
Q ss_pred EEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC
Q psy5792 176 QVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~ 255 (377)
.+.|++.| +++||.+| .+++|+.++...-....-+. -...+..+..+..| +|.++.||.....
T Consensus 137 ----------eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~--V~~~g~~v~~lNeL--e~~dG~lyanvw~ 199 (268)
T 3nok_A 137 ----------EGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQ--VKLRGQPVELINEL--ECANGVIYANIWH 199 (268)
T ss_dssp ----------CCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEE--CEETTEECCCEEEE--EEETTEEEEEETT
T ss_pred ----------ceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEE--eCCCCccccccccc--EEeCCEEEEEECC
Confidence 13455556 67888888 57888888876432221111 00000122334444 4558999999888
Q ss_pred CCEEEEEEcCCCeEEEEeeC-------------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 256 ENVIEVARLTGQYRYVLISG-------------GVDQPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 256 ~~~I~~~~~~g~~~~~l~~~-------------~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
.+.|.++++........+.. ....|.|||.||.++.||+|-.. =++++++.+
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~-Wp~~~ev~~ 264 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL-WPRLFEVRL 264 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT-CSEEEEEEE
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC-CCceEEEEE
Confidence 89999999976544332221 12478999999999999999742 478888776
No 97
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.15 E-value=1.8e-08 Score=96.35 Aligned_cols=267 Identities=7% Similarity=0.030 Sum_probs=155.4
Q ss_pred CcCCccccccCCCCeEEEEeC---------CCCcEEEEEcCCc--EEEEEeCC-----CCCceEEEEE--ECCeEEEEcC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKT---------LSHSLHYVNIEVK--VAKVVSMP-----DAAQVVAAVF--YKGRIIYSDA 76 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~---------~~~~I~~~~~dG~--~~~i~~~~-----~~~~p~~lav--~~~~ly~td~ 76 (377)
...|. +++++++.+||+++. ..+.|..+|.... ..+|.... ....|+++++ .+.+||+++.
T Consensus 78 G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~ 156 (386)
T 3sjl_D 78 GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF 156 (386)
T ss_dssp CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC
T ss_pred CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc
Confidence 35785 999999999999985 3567999999887 55553111 1357999999 6778999997
Q ss_pred C-CCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEE
Q psy5792 77 N-DGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILF 154 (377)
Q Consensus 77 ~-~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~ 154 (377)
. .+.|..+| .+++....+.... . ..++..... .|+
T Consensus 157 ~~~~~VsVID~~t~~vv~tI~v~g-~--~~~~P~g~~--------------------------------------~~~-- 193 (386)
T 3sjl_D 157 SPAPAVGVVDLEGKAFKRMLDVPD-C--YHIFPTAPD--------------------------------------TFF-- 193 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEEECCS-E--EEEEEEETT--------------------------------------EEE--
T ss_pred CCCCeEEEEECCCCcEEEEEECCC-c--ceeecCCCc--------------------------------------eeE--
Confidence 5 68899999 6776665553211 1 111111110 011
Q ss_pred EeCCCCeEEEEEcCCCCceeeEEE-EecCCCCceEE--EEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecc---cc
Q psy5792 155 SVNSGYDIMGIKYNKNESKVTQVL-GPLSKVSLAAK--VDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYV---ET 228 (377)
Q Consensus 155 s~~~~~~I~~~~l~~~~~~~~~~~-~~~~~~~~~~~--l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~---~~ 228 (377)
+....|++..++++..+.- .... ..+.....+.. ..++..+++++|... .++|+.+++.+...+.+-.-. ..
T Consensus 194 ~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~ 271 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEA 271 (386)
T ss_dssp EEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHH
T ss_pred EECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccc
Confidence 1111122444444331110 0000 01111111221 356666788777654 689999999765443321100 00
Q ss_pred CCCCCCCCcc---eEEEeccCCeEEEEcCC---------CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCC-eEEEE
Q psy5792 229 GDPTPVDQFT---DIAVDWIAQNIYWSDPK---------ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG-YLFWS 295 (377)
Q Consensus 229 ~~~~~~~~p~---~iavD~~~~~lYwtd~~---------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g-~lywt 295 (377)
.. ..-..|. .+++|...++||++... .++|.++++....+..-+.. ...|.+|++++... +||.+
T Consensus 272 ~~-~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 272 ER-ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HH-HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred cc-cccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEE
Confidence 00 0001233 38999999999998641 25899999987654322222 23689999999765 78888
Q ss_pred ecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeC
Q psy5792 296 ESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDR 331 (377)
Q Consensus 296 d~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~ 331 (377)
+++ ...|..++........-+.. ...|+.|.+..
T Consensus 350 n~~-~~~VsViD~~t~k~~~~i~~-~~~p~~l~~s~ 383 (386)
T 3sjl_D 350 STG-DKTLYIHDAESGEELRSVNQ-LGHGPQVITTA 383 (386)
T ss_dssp ETT-TTEEEEEETTTCCEEEEECC-CCSSCCEEEEC
T ss_pred cCC-CCeEEEEECCCCcEEEEecC-CCCCceeEECC
Confidence 875 67888888753333222332 57888887753
No 98
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.15 E-value=2.2e-08 Score=94.88 Aligned_cols=245 Identities=12% Similarity=0.126 Sum_probs=150.8
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEc--CCcEEEEEeCCCCCceEEEEE-ECCe---EEEEc-------C-----C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNI--EVKVAKVVSMPDAAQVVAAVF-YKGR---IIYSD-------A-----N 77 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~--dG~~~~i~~~~~~~~p~~lav-~~~~---ly~td-------~-----~ 77 (377)
..|.++++++++++||.++.. .|...++ +|+...+........|..+++ .+++ +|.++ . .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 368999999999899988876 7888887 455322221111124666777 3343 34454 1 3
Q ss_pred CCceEEEc--CCCCceEEEec----CC-CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCc
Q psy5792 78 DGNIRSIN--LDGSNSTVLRN----NA-GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISD 150 (377)
Q Consensus 78 ~~~I~~~~--~~g~~~~~~~~----~~-~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~ 150 (377)
.+.+..++ .+|+....+.. .. .|.++++ +|+. .
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-spdG---------------------------------------~ 157 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVF-DPTE---------------------------------------T 157 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEE-CTTS---------------------------------------S
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEE-CCCC---------------------------------------C
Confidence 45565555 35654333321 11 2555554 3332 2
Q ss_pred EEEEEeCCCCeEEEEEcC-CCCceeeEEE--EecCC-CCceEEEEEECCCCEEEEEEcCCCcEEEEEcC---CCCc---E
Q psy5792 151 FILFSVNSGYDIMGIKYN-KNESKVTQVL--GPLSK-VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD---GTGR---E 220 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~-~~~~~~~~~~--~~~~~-~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~---G~~~---~ 220 (377)
++++++...+.|+.++++ .... ..+ ..... ...|.++++++.++.||+++...+.|..++.+ |... +
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~---~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 234 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEV---ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH 234 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCE---EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCE---EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc
Confidence 577776544569988887 3322 111 12222 45699999999888999999877888877765 2211 1
Q ss_pred EEEeccccCCCCCC---C-------CcceEE-EeccCCeEEEEcCCCC-----EEEEEEcC--CCeEEE--EeeCCCCCc
Q psy5792 221 NIIEYVETGDPTPV---D-------QFTDIA-VDWIAQNIYWSDPKEN-----VIEVARLT--GQYRYV--LISGGVDQP 280 (377)
Q Consensus 221 ~i~~~~~~~~~~~~---~-------~p~~ia-vD~~~~~lYwtd~~~~-----~I~~~~~~--g~~~~~--l~~~~~~~P 280 (377)
.+.. .+.+. . .|.+++ +++.++.||.++...+ +|.+.+++ |+.... .+......|
T Consensus 235 ~~~~-----~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~ 309 (365)
T 1jof_A 235 SFPL-----IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG 309 (365)
T ss_dssp EEES-----SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT
T ss_pred eEEc-----CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc
Confidence 1211 00111 1 488999 9998889999987554 88888874 443322 233334569
Q ss_pred eeEEEcC---CCCeEEEEecCCCCeEEEEecCCC
Q psy5792 281 SALAVDP---ESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 281 ~~iavdp---~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
++++++| ..++||+++.. ...|...++++.
T Consensus 310 ~~~a~sp~~~dg~~l~v~~~~-~~~v~v~~~~~~ 342 (365)
T 1jof_A 310 HSNAVSPCPWSDEWMAITDDQ-EGWLEIYRWKDE 342 (365)
T ss_dssp TCCCEEECTTCTTEEEEECSS-SCEEEEEEEETT
T ss_pred ccceecCCCcCCCEEEEEEcC-CCeEEEEEEchh
Confidence 9999999 68899999864 467777777665
No 99
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.14 E-value=1e-08 Score=92.25 Aligned_cols=191 Identities=15% Similarity=0.157 Sum_probs=124.1
Q ss_pred ccccccCCCCeEEEEeCCC--CcEEEEEcCCc--EEEEEeCCCCCce--EEEEEECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 19 ASTLKPQSGPFVYGVKTLS--HSLHYVNIEVK--VAKVVSMPDAAQV--VAAVFYKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 19 ~~~~~d~~~~~ly~~d~~~--~~I~~~~~dG~--~~~i~~~~~~~~p--~~lav~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
.|++++ +++||...... ..|.++|++.. .+++. ....+ .||++.+++||..+|..+.+.++| .+++..
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~---l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE---LGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe---cCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 788887 46999998764 48999999766 55553 23344 558889999999999999999888 455433
Q ss_pred EEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 92 TVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 92 ~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
..+...+
T Consensus 121 -----------------------------------------------------------------------~ti~~~~-- 127 (262)
T 3nol_A 121 -----------------------------------------------------------------------RSFNYDG-- 127 (262)
T ss_dssp -----------------------------------------------------------------------EEEECSS--
T ss_pred -----------------------------------------------------------------------EEEECCC--
Confidence 2332221
Q ss_pred ceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEE
Q psy5792 172 SKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYW 251 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYw 251 (377)
...|++.| +++||.+|. +++|+.++...-....-+.- ......+..++.|. |.++.||.
T Consensus 128 --------------eG~glt~d--g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V--~~~g~~~~~lNELe--~~~G~lya 186 (262)
T 3nol_A 128 --------------EGWGLTHN--DQYLIMSDG-TPVLRFLDPESLTPVRTITV--TAHGEELPELNELE--WVDGEIFA 186 (262)
T ss_dssp --------------CCCCEEEC--SSCEEECCS-SSEEEEECTTTCSEEEEEEC--EETTEECCCEEEEE--EETTEEEE
T ss_pred --------------CceEEecC--CCEEEEECC-CCeEEEEcCCCCeEEEEEEe--ccCCccccccceeE--EECCEEEE
Confidence 12344444 677777773 56777777763222111110 00001122344444 45899999
Q ss_pred EcCCCCEEEEEEcCCCeEEEEee-CC-----------CCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 252 SDPKENVIEVARLTGQYRYVLIS-GG-----------VDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 252 td~~~~~I~~~~~~g~~~~~l~~-~~-----------~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
.....+.|.++++........+. .+ ...|.|||.||.++.||+|-.. =++++++.+.
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~-Wp~~~ev~~~ 255 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL-WPKVFEITLT 255 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT-CSEEEEEEEE
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC-CCceEEEEEe
Confidence 99888999999997655433333 21 2468999999999999999743 4788887653
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.14 E-value=5.4e-08 Score=90.25 Aligned_cols=275 Identities=13% Similarity=0.055 Sum_probs=161.2
Q ss_pred CccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCceE
Q psy5792 18 VASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSNST 92 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~~~ 92 (377)
++|+++.. ++++|++....+.|..+|+++. ..++- ......|.++++ .+.++|+++...+.|..++ .+|+...
T Consensus 2 ~~g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 2 DTGPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp --CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CccccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 56777775 5789999999999999999766 44442 222226889999 3457999998889999999 5565544
Q ss_pred EEecCC------C-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC-------
Q psy5792 93 VLRNNA------G-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS------- 158 (377)
Q Consensus 93 ~~~~~~------~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~------- 158 (377)
.+.... . |.++.+ +++. ..++++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-spdg---------------------------------------~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAI-SPDG---------------------------------------KEVYATVNPTQRLNDH 119 (349)
T ss_dssp EEESCCSTTEEEECSSCEEE-CTTS---------------------------------------SEEEEEEEEEEECSSC
T ss_pred EEEcccccccccccccceEE-CCCC---------------------------------------CEEEEEcccccccccc
Confidence 443211 1 344443 2221 245555522
Q ss_pred ----CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC---
Q psy5792 159 ----GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP--- 231 (377)
Q Consensus 159 ----~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~--- 231 (377)
.+.|..+++..... ...+........+.++++++.+. +|+++ +.|+.+++........+.......+
T Consensus 120 ~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~-l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 193 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLE--AKPVRTFPMPRQVYLMRAADDGS-LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYS 193 (349)
T ss_dssp EEECCCEEEEEEGGGGGG--BCCSEEEECCSSCCCEEECTTSC-EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBC
T ss_pred cccCCCeEEEEECCCccc--cceeeeccCCCcccceeECCCCc-EEEcc---CcEEEEeCCCCceeccccccccCCcccc
Confidence 23488888865221 01111112223577888888666 88753 3488888764332222220000000
Q ss_pred -----------C---CCCCcceEEEecc---------CCeEEE-EcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcC
Q psy5792 232 -----------T---PVDQFTDIAVDWI---------AQNIYW-SDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDP 287 (377)
Q Consensus 232 -----------~---~~~~p~~iavD~~---------~~~lYw-td~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp 287 (377)
. .+..|.++++... ....|+ .+...+++...+++ .....|.+++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~sp 264 (349)
T 1jmx_B 194 APDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA---------DLTELYFTGLRSP 264 (349)
T ss_dssp CCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE---------ECSSCEEEEEECS
T ss_pred CccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc---------cCCCcceeeEecC
Confidence 0 0003445555421 122333 34444444444331 1345689999999
Q ss_pred -CCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 288 -ESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 288 -~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
...+||.+ ..+|...++........+.. -..|.++++++.+++||.+. ..+.|...+.....
T Consensus 265 ~dg~~l~~~----~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 265 KDPNQIYGV----LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGG--TFNDLAVFNPDTLE 327 (349)
T ss_dssp SCTTEEEEE----ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEES--BSSEEEEEETTTTE
T ss_pred CCCCEEEEE----cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEec--CCCeEEEEeccccc
Confidence 88899988 25899998876544333333 25688999998888899864 45899999987543
No 101
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=4.7e-09 Score=101.86 Aligned_cols=247 Identities=9% Similarity=0.075 Sum_probs=149.1
Q ss_pred CcCCccccccCCCCeEEEEeC---------CCCcEEEEEcCCc--EEEEEeCC------CCCceEEEEE--ECCeEEEEc
Q psy5792 15 FGAVASTLKPQSGPFVYGVKT---------LSHSLHYVNIEVK--VAKVVSMP------DAAQVVAAVF--YKGRIIYSD 75 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~---------~~~~I~~~~~dG~--~~~i~~~~------~~~~p~~lav--~~~~ly~td 75 (377)
...| ++++++++++||+++. ..+.|..+|+... ..+|.. . ....|.++++ .+.+||+++
T Consensus 118 G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v-~g~~r~~~g~~P~~~~~spDGk~lyV~n 195 (426)
T 3c75_H 118 GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL-PDAPRFLVGTYQWMNALTPDNKNLLFYQ 195 (426)
T ss_dssp CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE-TTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC-CCccccccCCCcceEEEcCCCCEEEEEe
Confidence 4589 9999999999999986 4678999999776 555531 2 1357899999 677999999
Q ss_pred CC-CCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEE
Q psy5792 76 AN-DGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFIL 153 (377)
Q Consensus 76 ~~-~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~ 153 (377)
.. .+.|..+| .+++....+.-. ....++..... .+
T Consensus 196 ~~~~~~VsVID~~t~kvv~~I~v~---g~~~~~p~g~~----------------------------------------~~ 232 (426)
T 3c75_H 196 FSPAPAVGVVDLEGKTFDRMLDVP---DCYHIFPASPT----------------------------------------VF 232 (426)
T ss_dssp CSSSCEEEEEETTTTEEEEEEECC---SEEEEEEEETT----------------------------------------EE
T ss_pred cCCCCeEEEEECCCCeEEEEEEcC---CceeeccCCCc----------------------------------------EE
Confidence 75 68899999 666665544321 11111111100 11
Q ss_pred EEeCCCCeEEEEEcCCCCceeeEEE-EecCCCCce--EEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCC
Q psy5792 154 FSVNSGYDIMGIKYNKNESKVTQVL-GPLSKVSLA--AKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGD 230 (377)
Q Consensus 154 ~s~~~~~~I~~~~l~~~~~~~~~~~-~~~~~~~~~--~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~ 230 (377)
++....|++..+++..... .... ..+.....+ ..+.+....+.+|++.. .++++.+++.+.....+... ....
T Consensus 233 v~~~~dG~~~~V~~~~~~v--~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~-~~~~ 308 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGET--KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPI-EALT 308 (426)
T ss_dssp EEEETTSSEEEEECCTTCC--EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCE-ESSC
T ss_pred EEEcCCCCEEEEECCCCcE--EEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeee-eecc
Confidence 2221222355555522211 0000 001111112 22455666788888764 57899998875432221110 0000
Q ss_pred CC--CC-CCcce---EEEeccCCeEEEEcCC---------CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCC-eEEE
Q psy5792 231 PT--PV-DQFTD---IAVDWIAQNIYWSDPK---------ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG-YLFW 294 (377)
Q Consensus 231 ~~--~~-~~p~~---iavD~~~~~lYwtd~~---------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g-~lyw 294 (377)
.. .. ..|.+ +++++.+++||+++.. .++|.++++.......-+.. ...|.+|+++|... ++|.
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv 387 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYA 387 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEE
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEE
Confidence 00 00 12555 8999989999999742 35799999987653322222 23599999999888 8999
Q ss_pred EecCCCCeEEEEecCCCC
Q psy5792 295 SESGKIPLIARAGLDGKK 312 (377)
Q Consensus 295 td~g~~~~I~r~~ldG~~ 312 (377)
+.++ ...|..+++..-.
T Consensus 388 ~n~~-s~~VsVID~~t~k 404 (426)
T 3c75_H 388 LSAG-TQTLHIYDAATGE 404 (426)
T ss_dssp EETT-TTEEEEEETTTCC
T ss_pred EcCC-CCeEEEEECCCCC
Confidence 9975 6899999986543
No 102
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.14 E-value=2.6e-09 Score=100.74 Aligned_cols=160 Identities=15% Similarity=0.127 Sum_probs=115.2
Q ss_pred cCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc---CCeEEEEc--CC
Q psy5792 181 LSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI---AQNIYWSD--PK 255 (377)
Q Consensus 181 ~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~---~~~lYwtd--~~ 255 (377)
..++..|.+|++.+ ++.||+++...++|++++.++...+.+.. .......+...+.|||+++. ++.||++. ..
T Consensus 28 a~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~-~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 28 ATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGE-VPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp ECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEE-CTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred ecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecc-cCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 46788999999998 57899999878999999876444333322 00001134556999999983 78899864 35
Q ss_pred CCEEEEEEcCCC--------eEEEEeeC----CCCCceeEEEcCCCCeEEEEec--C----------CCCeEEEEecCCC
Q psy5792 256 ENVIEVARLTGQ--------YRYVLISG----GVDQPSALAVDPESGYLFWSES--G----------KIPLIARAGLDGK 311 (377)
Q Consensus 256 ~~~I~~~~~~g~--------~~~~l~~~----~~~~P~~iavdp~~g~lywtd~--g----------~~~~I~r~~ldG~ 311 (377)
.++|.++.+++. ..++++.. ....+..|+++| .|+||++.- + ...+|.|++.||+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 579999998872 23444431 244578899998 689999941 1 1479999999998
Q ss_pred --------CeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCe
Q psy5792 312 --------KQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNV 346 (377)
Q Consensus 312 --------~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~ 346 (377)
..++ ....+.+|.||++|+ +++||++|. ..+.
T Consensus 185 ip~~nPf~~~~i-~a~G~RNp~Gla~dp-~G~L~~~d~-g~~~ 224 (347)
T 3das_A 185 PAPGNPFPGSPV-YSYGHRNVQGLAWDD-KQRLFASEF-GQDT 224 (347)
T ss_dssp BCTTCSSTTCCE-EEBCCSBCCEEEECT-TCCEEEEEC-CSSS
T ss_pred ccCCCCCCCCeE-EeeCCCCcceEEECC-CCCEEEEec-CCCC
Confidence 4444 444689999999997 699999998 6543
No 103
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=4e-07 Score=86.88 Aligned_cols=263 Identities=10% Similarity=0.019 Sum_probs=151.9
Q ss_pred CCcCCccccccCCCCeEEEEeC---------CCCcEEEEEcCCc--EEEEEeCC------CCCceEEEEE--ECCeEEEE
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKT---------LSHSLHYVNIEVK--VAKVVSMP------DAAQVVAAVF--YKGRIIYS 74 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~---------~~~~I~~~~~dG~--~~~i~~~~------~~~~p~~lav--~~~~ly~t 74 (377)
+...| ++++++++++||+++. ..+.|..+|.... ..++- .. ....|.++++ .+.+||++
T Consensus 65 ~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~-~~~~~~~~~g~~p~~~~~spDG~~l~v~ 142 (373)
T 2mad_H 65 GGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFF 142 (373)
T ss_pred CCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE-CCCccccccCCCccceEECCCCCEEEEE
Confidence 34577 9999999999999985 3577999999755 45442 11 1356889998 67899999
Q ss_pred cCC-CCceEEEcCCC-CceEE-EecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcE
Q psy5792 75 DAN-DGNIRSINLDG-SNSTV-LRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDF 151 (377)
Q Consensus 75 d~~-~~~I~~~~~~g-~~~~~-~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~ 151 (377)
+.. .+.|..+| .. +.... +.. |.++.++.... .
T Consensus 143 n~~~~~~v~viD-~t~~~~~~~i~~---~~~~~~~~~~~----------------------------------------~ 178 (373)
T 2mad_H 143 QFAAGPAVGLVV-QGGSSDDQLLSS---PTCYHIHPGAP----------------------------------------S 178 (373)
T ss_pred ecCCCCeEEEEE-CCCCEEeEEcCC---CceEEEEeCCC----------------------------------------c
Confidence 875 57899998 43 22222 211 22222221111 1
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEE--ecCCCCce--EEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccc
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLG--PLSKVSLA--AKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVE 227 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~--~~~~~~~~--~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~ 227 (377)
.+++....|++..+++ .... ..... +......+ ....+....+.+||.. ..+.++.+++.+...+.+..-..
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGA--AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcE--EEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeee
Confidence 2222222334666666 2211 00000 00011112 2233455567777776 45788888887543222211000
Q ss_pred cC-C-CCCCCCcce---EEEeccCCeEEEEcCC---------CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCC-eE
Q psy5792 228 TG-D-PTPVDQFTD---IAVDWIAQNIYWSDPK---------ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESG-YL 292 (377)
Q Consensus 228 ~~-~-~~~~~~p~~---iavD~~~~~lYwtd~~---------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g-~l 292 (377)
.. . ......|.+ +++++.++.||++... .+.|.++++.......-+.. ...|.+|+++|... .+
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDL 333 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEE
Confidence 00 0 001113555 8999888999998642 35899999987654322332 33699999999877 67
Q ss_pred EEEecCCCCeEEEEecCCCCeE-EEEecCCCCceEEEE
Q psy5792 293 FWSESGKIPLIARAGLDGKKQT-ILAQEIIMPIKDITL 329 (377)
Q Consensus 293 ywtd~g~~~~I~r~~ldG~~~~-~l~~~~~~~P~glal 329 (377)
|.+.++ ...|..+++...... .+..-+ ..|.+|..
T Consensus 334 ~v~~~~-~~~V~ViD~~t~~vv~~i~~vG-~~P~~~~~ 369 (373)
T 2mad_H 334 YALSAG-TEVLHIYDAGAGDQDQSTVELG-SGPQVLSV 369 (373)
T ss_pred EEEcCC-CCeEEEEECCCCCEEeeecCCC-CCCcEEEE
Confidence 777765 578999998754433 323322 56888776
No 104
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.13 E-value=1.4e-08 Score=99.53 Aligned_cols=248 Identities=18% Similarity=0.156 Sum_probs=157.5
Q ss_pred EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEe--c------CCC-ceeEEeeecCCCCcccCC
Q psy5792 49 VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLR--N------NAG-ISDFILFSVNSGYDIMGI 117 (377)
Q Consensus 49 ~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~--~------~~~-p~~i~v~~~~~~~~~~~~ 117 (377)
.+++. ..+.+|++|++ -+++||+++...++|++++ .+|+...+.. . ... +.||++ +|+=.
T Consensus 19 ~~~~a--~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~-~Pdf~------ 89 (454)
T 1cru_A 19 KKVIL--SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAF-HPDFK------ 89 (454)
T ss_dssp EEEEE--CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEE-CTTTT------
T ss_pred EEEEE--CCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEE-CCCcC------
Confidence 66665 67999999999 7779999999877899998 4565443321 1 112 667775 44211
Q ss_pred CcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC------------CCeEEEEEcCCCCcee--eEEEE---e
Q psy5792 118 KYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS------------GYDIMGIKYNKNESKV--TQVLG---P 180 (377)
Q Consensus 118 ~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~------------~~~I~~~~l~~~~~~~--~~~~~---~ 180 (377)
.+..|+++... ...|.++.++....++ ...++ +
T Consensus 90 ------------------------------~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p 139 (454)
T 1cru_A 90 ------------------------------NNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP 139 (454)
T ss_dssp ------------------------------TSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred ------------------------------cCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC
Confidence 01245554421 1248888876532211 12222 2
Q ss_pred cCCCCceEEEEEECCCCEEEEEEcC--------------------------------CCcEEEEEcCCC-----------
Q psy5792 181 LSKVSLAAKVDFHAAEDYIYWVDID--------------------------------HGTISRTHRDGT----------- 217 (377)
Q Consensus 181 ~~~~~~~~~l~~d~~~~~ly~sd~~--------------------------------~~~I~~~~~~G~----------- 217 (377)
......+.+|++++ +++||++.-. .++|.|++.+|+
T Consensus 140 ~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~ 218 (454)
T 1cru_A 140 SSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGV 218 (454)
T ss_dssp CCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTE
T ss_pred CCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCC
Confidence 22344589999998 6789998421 368999999997
Q ss_pred CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCC---EEEEEEcCCCe--------------------------
Q psy5792 218 GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN---VIEVARLTGQY-------------------------- 268 (377)
Q Consensus 218 ~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~---~I~~~~~~g~~-------------------------- 268 (377)
..++. . .++.+|.+|++|+ ++.||.++.... .|..+...+.+
T Consensus 219 ~~ei~-a-------~G~RNp~gla~dp-~G~L~~~d~g~~~~dein~i~~G~nYGWP~~~G~~~~~~~~~~~~~~~~~~~ 289 (454)
T 1cru_A 219 VSHIY-T-------LGHRNPQGLAFTP-NGKLLQSEQGPNSDDEINLIVKGGNYGWPNVAGYKDDSGYAYANYSAAANKS 289 (454)
T ss_dssp ECSEE-E-------BCCSEEEEEEECT-TSCEEEEEECSSSCEEEEECCTTCBCCTTTCSSSSSCSSCCEECGGGSSCTT
T ss_pred cceEE-E-------ECCCCcceEEECC-CCCEEEEecCCCCCeEEEEecCCCCCCCCceecCcccCcccccccccccccc
Confidence 33444 4 4788899999998 799999986532 33333221100
Q ss_pred ----------------------------EEEEee----------------------CCCCCceeEEEcC--------CCC
Q psy5792 269 ----------------------------RYVLIS----------------------GGVDQPSALAVDP--------ESG 290 (377)
Q Consensus 269 ----------------------------~~~l~~----------------------~~~~~P~~iavdp--------~~g 290 (377)
..-++. .....|.++++.. .+|
T Consensus 290 ~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ap~G~~fy~g~~~~~~~~~g 369 (454)
T 1cru_A 290 IKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWPTVAPSSAYVYKGGKKAITGWEN 369 (454)
T ss_dssp CCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGSSCCCBCCCEECCCCTTCCTTCTT
T ss_pred ccccccCCcccCccccccccccccCCCcCCCceecccccccccccccccccccccccCccCcceeEEeCCCCccCcccCC
Confidence 000000 0123477888853 348
Q ss_pred eEEEEecCCCCeEEEEecCCCC--e----EEEEecCCCCceEEEEeCCCCE-EEEEEeCCCCeEEE
Q psy5792 291 YLFWSESGKIPLIARAGLDGKK--Q----TILAQEIIMPIKDITLDRKNKR-VYWCYSVGSNVLES 349 (377)
Q Consensus 291 ~lywtd~g~~~~I~r~~ldG~~--~----~~l~~~~~~~P~glalD~~~~~-LYw~d~~~~~~i~~ 349 (377)
.||++++. ..+|.++.+++.+ . ..++. ....|.++++++ .+. ||+++. ..+.|++
T Consensus 370 ~lfv~~~~-~~~i~~v~l~~~g~~~~~~~~~~~~-~~~R~~dv~~gp-DG~~Lyv~~d-~~G~i~~ 431 (454)
T 1cru_A 370 TLLVPSLK-RGVIFRIKLDPTYSTTYDDAVPMFK-SNNRYRDVIASP-DGNVLYVLTD-TAGNVQK 431 (454)
T ss_dssp EEEEEBSS-SCCEEEEEECTTSSSEEEEEEEESC-CSSCEEEEEECT-TSSCEEEEEC-SSCCEEC
T ss_pred cEEEeecC-CCEEEEEEECCCCCeeeeeeeeecc-cCCCceeEEECC-CCCEEEEEEC-CCCCCcc
Confidence 89999996 5799999998533 2 12222 357999999986 465 999999 8888765
No 105
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.13 E-value=2.2e-09 Score=105.32 Aligned_cols=160 Identities=14% Similarity=0.190 Sum_probs=113.3
Q ss_pred CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC-CCCCCCCcceEEEecc---CCeEEEEcCC--
Q psy5792 182 SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG-DPTPVDQFTDIAVDWI---AQNIYWSDPK-- 255 (377)
Q Consensus 182 ~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~-~~~~~~~p~~iavD~~---~~~lYwtd~~-- 255 (377)
.++..|.+|++++ +++||+++...++|++++.++...+.+....... ...+...+.|||+++. ++.||+++..
T Consensus 24 ~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 24 SNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 4677899999998 5789999987778999987533334333210000 0012345779999986 8999999853
Q ss_pred ----------CCEEEEEEcCCC-----eEEEEee----CCCCCceeEEEcCCCCeEEEEecC--C---------------
Q psy5792 256 ----------ENVIEVARLTGQ-----YRYVLIS----GGVDQPSALAVDPESGYLFWSESG--K--------------- 299 (377)
Q Consensus 256 ----------~~~I~~~~~~g~-----~~~~l~~----~~~~~P~~iavdp~~g~lywtd~g--~--------------- 299 (377)
..+|.+++++.. ..++++. .....+.+|+++| .|+||++... .
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~ 181 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHT 181 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccc
Confidence 358999988642 3345553 2345689999998 7899998521 0
Q ss_pred --------------CCeEEEEecCCCC----------eEEEEecCCCCceEEEEeCCCCEEEEEEeCCCC
Q psy5792 300 --------------IPLIARAGLDGKK----------QTILAQEIIMPIKDITLDRKNKRVYWCYSVGSN 345 (377)
Q Consensus 300 --------------~~~I~r~~ldG~~----------~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~ 345 (377)
..+|.|++.||+- ...+....+.+|.||++|. +++||.+|. ..+
T Consensus 182 p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~-g~~ 249 (454)
T 1cru_A 182 PTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQ-GPN 249 (454)
T ss_dssp CCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEE-CSS
T ss_pred cccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEec-CCC
Confidence 3689999999972 2234455689999999998 799999998 654
No 106
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.13 E-value=4.4e-08 Score=88.19 Aligned_cols=149 Identities=9% Similarity=0.017 Sum_probs=103.2
Q ss_pred EEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCC
Q psy5792 188 AKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQ 267 (377)
Q Consensus 188 ~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~ 267 (377)
.|++++ +++||.++...+.+++++.+.-....-+. . -..+.||+-| ++.||.+|. .++|...++...
T Consensus 99 eGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~-------~-~~eGwGLt~D--g~~L~vSdG-s~~l~~iDp~T~ 165 (268)
T 3nok_A 99 EGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTR-------Y-SGEGWGLCYW--NGKLVRSDG-GTMLTFHEPDGF 165 (268)
T ss_dssp EEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEE-------C-SSCCCCEEEE--TTEEEEECS-SSEEEEECTTTC
T ss_pred eEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEe-------C-CCceeEEecC--CCEEEEECC-CCEEEEEcCCCC
Confidence 445555 78999999889999999987422222222 1 1346778877 789999995 789999998875
Q ss_pred eE-EEE-eeC---CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-eEEEEecC------------CCCceEEEE
Q psy5792 268 YR-YVL-ISG---GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILAQEI------------IMPIKDITL 329 (377)
Q Consensus 268 ~~-~~l-~~~---~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-~~~l~~~~------------~~~P~glal 329 (377)
.. ..+ +.. .+..+..+.. .+|.||...|. ...|.+++..-.. ...+-... ..-|+|||.
T Consensus 166 ~v~~~I~V~~~g~~v~~lNeLe~--~dG~lyanvw~-s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~ 242 (268)
T 3nok_A 166 ALVGAVQVKLRGQPVELINELEC--ANGVIYANIWH-SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAV 242 (268)
T ss_dssp CEEEEEECEETTEECCCEEEEEE--ETTEEEEEETT-CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEE
T ss_pred eEEEEEEeCCCCcccccccccEE--eCCEEEEEECC-CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEE
Confidence 32 222 211 1234455554 47899999985 6899999985433 33333221 136899999
Q ss_pred eCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 330 DRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 330 D~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
|+.+++||++-. .=.+++.+.++
T Consensus 243 dp~~~rlfVTGK-~Wp~~~ev~~~ 265 (268)
T 3nok_A 243 EPGSGRIFMTGK-LWPRLFEVRLD 265 (268)
T ss_dssp CTTTCCEEEEET-TCSEEEEEEEE
T ss_pred cCCCCEEEEeCC-CCCceEEEEEE
Confidence 999999999998 77888888763
No 107
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.13 E-value=1.5e-07 Score=83.89 Aligned_cols=150 Identities=14% Similarity=0.078 Sum_probs=104.5
Q ss_pred eEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 187 AAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
..|++++ +++||..+...+.+++++.+.-....-+. .. ..+.||+-| ++.||.+|. .++|.+.++..
T Consensus 67 geGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~-------~~-~~Gwglt~d--g~~L~vSdg-s~~l~~iDp~t 133 (243)
T 3mbr_X 67 GAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFR-------YP-GEGWALTSD--DSHLYMSDG-TAVIRKLDPDT 133 (243)
T ss_dssp EEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEE-------CS-SCCCEEEEC--SSCEEEECS-SSEEEEECTTT
T ss_pred eeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEe-------CC-CCceEEeeC--CCEEEEECC-CCeEEEEeCCC
Confidence 4566666 79999999999999999987422222222 11 246677665 889999996 78999999886
Q ss_pred CeEE-EE-eeC---CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-eEEEEecC------------CCCceEEE
Q psy5792 267 QYRY-VL-ISG---GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK-QTILAQEI------------IMPIKDIT 328 (377)
Q Consensus 267 ~~~~-~l-~~~---~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~-~~~l~~~~------------~~~P~gla 328 (377)
.... .+ +.. .+..+..+.. .+|.||...|. ...|.+++..-.. ...+-... ..-|+|||
T Consensus 134 ~~~~~~I~V~~~g~~~~~lNeLe~--~~G~lyanvw~-s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA 210 (243)
T 3mbr_X 134 LQQVGSIKVTAGGRPLDNLNELEW--VNGELLANVWL-TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIA 210 (243)
T ss_dssp CCEEEEEECEETTEECCCEEEEEE--ETTEEEEEETT-TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEE
T ss_pred CeEEEEEEEccCCcccccceeeEE--eCCEEEEEECC-CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEE
Confidence 5332 22 211 1233444443 58999999985 6799999886433 33433221 23689999
Q ss_pred EeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 329 LDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 329 lD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.|+.+++||++-. .=.+++.+.+.
T Consensus 211 ~d~~~~~lfVTGK-~wp~~~~v~~~ 234 (243)
T 3mbr_X 211 FDAEHDRLFVTGK-RWPMLYEIRLT 234 (243)
T ss_dssp EETTTTEEEEEET-TCSEEEEEEEC
T ss_pred EcCCCCEEEEECC-CCCcEEEEEEe
Confidence 9999999999998 88899998875
No 108
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=5.7e-08 Score=86.59 Aligned_cols=199 Identities=14% Similarity=0.159 Sum_probs=130.6
Q ss_pred CCcCCccccccCCCCeEEEEeCC--CCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCC
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKTL--SHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDG 88 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~~--~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g 88 (377)
.-.+--||++|. ++||..... ...|.++|++.. .+++- ........|+++.+++||..+|..+.+.++| .++
T Consensus 19 ~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 19 TTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp TTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred CccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 334556899886 699999775 468999999766 55442 2333344677889999999999999999888 444
Q ss_pred CceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 89 SNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 89 ~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
+. +..+...
T Consensus 96 ~~-----------------------------------------------------------------------~~ti~~~ 104 (243)
T 3mbr_X 96 TP-----------------------------------------------------------------------RARFRYP 104 (243)
T ss_dssp EE-----------------------------------------------------------------------EEEEECS
T ss_pred cE-----------------------------------------------------------------------EEEEeCC
Confidence 33 2333222
Q ss_pred CCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 169 KNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
+ .+.|++.| +++||.+| .+++|+.++...-....-+. -...+..+..+.. ++|.++.
T Consensus 105 ~----------------~Gwglt~d--g~~L~vSd-gs~~l~~iDp~t~~~~~~I~--V~~~g~~~~~lNe--Le~~~G~ 161 (243)
T 3mbr_X 105 G----------------EGWALTSD--DSHLYMSD-GTAVIRKLDPDTLQQVGSIK--VTAGGRPLDNLNE--LEWVNGE 161 (243)
T ss_dssp S----------------CCCEEEEC--SSCEEEEC-SSSEEEEECTTTCCEEEEEE--CEETTEECCCEEE--EEEETTE
T ss_pred C----------------CceEEeeC--CCEEEEEC-CCCeEEEEeCCCCeEEEEEE--EccCCccccccee--eEEeCCE
Confidence 1 23455544 67888888 47788888776422211111 0000011223333 4566899
Q ss_pred EEEEcCCCCEEEEEEcCCCeEEEEee-C------------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 249 IYWSDPKENVIEVARLTGQYRYVLIS-G------------GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 249 lYwtd~~~~~I~~~~~~g~~~~~l~~-~------------~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
||......+.|.++++........+. . ....|.|||.||.++.||+|-.. =++++++.+..
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~-wp~~~~v~~~~ 235 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR-WPMLYEIRLTP 235 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT-CSEEEEEEECC
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC-CCcEEEEEEec
Confidence 99888888999999997655433332 1 22468999999999999999742 47898887754
No 109
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.12 E-value=2.2e-07 Score=87.30 Aligned_cols=163 Identities=10% Similarity=0.070 Sum_probs=109.2
Q ss_pred ceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc----EEEEeccccCCC----CCCCCcceEEEeccCCeEEEEcCCCC
Q psy5792 186 LAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR----ENIIEYVETGDP----TPVDQFTDIAVDWIAQNIYWSDPKEN 257 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~----~~i~~~~~~~~~----~~~~~p~~iavD~~~~~lYwtd~~~~ 257 (377)
.|..+++ .++.||+++...+.|..++++.... ...... .+..+ ....+|.++++++.++.||+++...+
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEF-KGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEEC-CCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEc-cCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC
Confidence 4666666 3788999998888888888753211 111110 00000 11234688999988778999999889
Q ss_pred EEEEEEcCCCeE-------------EEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEe--c---
Q psy5792 258 VIEVARLTGQYR-------------YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ--E--- 319 (377)
Q Consensus 258 ~I~~~~~~g~~~-------------~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~--~--- 319 (377)
+|.+.+++.... ..+.......|++++++|...+||+++.. ...|...+++....+.+.. .
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~~~g~~~~~~~~~~~~~ 256 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-GGTVIAFRYADGMLDEIQTVAADTV 256 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TCEEEEEEEETTEEEEEEEEESCSS
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-CCeEEEEEecCCceEEeEEEecCCC
Confidence 999888764321 12222345679999999988889999864 5778887776332222211 1
Q ss_pred CCCCceEEEEeCCCCEEEEEEeCC-CCeEEEEEcc
Q psy5792 320 IIMPIKDITLDRKNKRVYWCYSVG-SNVLESMDYS 353 (377)
Q Consensus 320 ~~~~P~glalD~~~~~LYw~d~~~-~~~i~~~~~~ 353 (377)
....|.++++++.+++||.++. . .+.|...+++
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~-~~~~~i~v~~~~ 290 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNR-LKADGVAIFKVD 290 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEEC-SSSCEEEEEEEC
T ss_pred CCCCcccEEECCCCCEEEEECC-CCCCEEEEEEEc
Confidence 1345789999998899999998 7 7777777765
No 110
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.10 E-value=1.1e-07 Score=91.96 Aligned_cols=271 Identities=13% Similarity=0.112 Sum_probs=161.8
Q ss_pred CCCCeEEEEeCCCCcEEEEEcC---Cc--EEEEEe------CCCCCceEEEEEECCeEEEEcCCC------CceEEEc-C
Q psy5792 25 QSGPFVYGVKTLSHSLHYVNIE---VK--VAKVVS------MPDAAQVVAAVFYKGRIIYSDAND------GNIRSIN-L 86 (377)
Q Consensus 25 ~~~~~ly~~d~~~~~I~~~~~d---G~--~~~i~~------~~~~~~p~~lav~~~~ly~td~~~------~~I~~~~-~ 86 (377)
.+..+||+....+++|+.+|.. .+ ...++. ..+...|.++.+..+.||++.+.+ +.|..+| .
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 4567899999999999999974 22 222220 014558999999544599998776 6788888 5
Q ss_pred CCCceEEEecCCCc----eeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe------
Q psy5792 87 DGSNSTVLRNNAGI----SDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV------ 156 (377)
Q Consensus 87 ~g~~~~~~~~~~~p----~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~------ 156 (377)
+++.+..+.....| .++. ++++.. .++.++
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~-~~p~~~---------------------------------------~mvsS~wg~p~~ 212 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFW-WNLPNE---------------------------------------VLVSSEWAVPNT 212 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEE-EETTTT---------------------------------------EEEECBCCCHHH
T ss_pred CCeEEEEEccCCCCccccceEE-ECCCCC---------------------------------------EEEEccCcCccc
Confidence 56665555422222 1121 233222 222222
Q ss_pred ------------CCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEE--ECCCCEEEEEEc-----CCCcEEEEEcCC
Q psy5792 157 ------------NSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDF--HAAEDYIYWVDI-----DHGTISRTHRDG 216 (377)
Q Consensus 157 ------------~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~--d~~~~~ly~sd~-----~~~~I~~~~~~G 216 (377)
....+|..++++.... .+ .+++. ....|..+.+ ++.+.++|++.. .++.|.++..++
T Consensus 213 ~~~g~~~~~~~~~~~d~V~v~D~~~~k~--~~-tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 213 IEDGLKLEHLKDRYGNRIHFWDLRKRKR--IH-SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp HTTCCCTTTHHHHSCCEEEEEETTTTEE--EE-EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred cccccchhhhhhccCCEEEEEECCCCcE--ee-EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 0122388888875422 22 23332 2235677766 888999999998 888998877764
Q ss_pred CCcE--EEEeccccCCCCC-----------CCCcceEEEeccCCeEEEEcCCCCEEEEEEcC-CCeEEE--EeeCC-C--
Q psy5792 217 TGRE--NIIEYVETGDPTP-----------VDQFTDIAVDWIAQNIYWSDPKENVIEVARLT-GQYRYV--LISGG-V-- 277 (377)
Q Consensus 217 ~~~~--~i~~~~~~~~~~~-----------~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~-g~~~~~--l~~~~-~-- 277 (377)
...+ .++.......... -..|.+|++.+.++.||+++...+.|.+++.+ ....+. .+..+ .
T Consensus 290 g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 290 GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTT
T ss_pred CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeec
Confidence 3211 1111000000000 14589999999999999999999999999985 322221 12222 1
Q ss_pred -------C----CceeEEEcCCCCeEEEEe--------c----CCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCC
Q psy5792 278 -------D----QPSALAVDPESGYLFWSE--------S----GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNK 334 (377)
Q Consensus 278 -------~----~P~~iavdp~~g~lywtd--------~----g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~ 334 (377)
. .|++++++|...+||+++ . +.+..+.+++.|.. +||+++.
T Consensus 370 ~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~-------------~GL~~~~--- 433 (462)
T 2ece_A 370 RADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPS-------------GGLEIDK--- 433 (462)
T ss_dssp CBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTT-------------SCEEEEE---
T ss_pred cccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCC-------------CCceeCC---
Confidence 1 599999999999999998 2 12334444433321 2344331
Q ss_pred EEEEEEeCCCCeEEEEEccCCc
Q psy5792 335 RVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 335 ~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
=+++|. ...+...+.+.||+
T Consensus 434 -~f~vdf-~~~~~h~~r~~ggd 453 (462)
T 2ece_A 434 -EFFVDF-GEARSHQVRLSGGD 453 (462)
T ss_dssp -EEEEEC-TTSEEEEEEETTCC
T ss_pred -CEEeec-ccCcceeeecCCCC
Confidence 144566 55667778888775
No 111
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=2.7e-07 Score=89.20 Aligned_cols=294 Identities=13% Similarity=0.106 Sum_probs=170.1
Q ss_pred eeccccCCCCc-CCccccccCCCCeEEEEeC-------CCCcEEEEEcC------Cc-EEEEEeCCCC---CceEEE---
Q psy5792 6 VLPYTRNPSFG-AVASTLKPQSGPFVYGVKT-------LSHSLHYVNIE------VK-VAKVVSMPDA---AQVVAA--- 64 (377)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~d~~~~~ly~~d~-------~~~~I~~~~~d------G~-~~~i~~~~~~---~~p~~l--- 64 (377)
..+|.++|+|- .|.--..-+..+.+|+.-. ..+.|..+|+| |+ +.++- .+.. .|=+|-
T Consensus 3 ~~~~~~~~~~y~sp~~a~~~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~-~p~~gde~HH~gwn~c 81 (462)
T 2ece_A 3 IVPFKRDPTFYPSPKMAMKAPPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVE-LPYINDELHHFGWNAC 81 (462)
T ss_dssp -----CCTTCCSSHHHHHTSCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEE-CSSSCCCBCCCEESCC
T ss_pred cccCCCCCCccCChHHHhcCCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEE-CCCCCCcccccchhhh
Confidence 46899999985 3443334445556776633 25788899998 67 55543 1211 111222
Q ss_pred --------E--EECCeEEEEcCCCCceEEEc-C-CCCceEEEec----------CCC-ceeEEeeecCCCCcccCCCcCC
Q psy5792 65 --------V--FYKGRIIYSDANDGNIRSIN-L-DGSNSTVLRN----------NAG-ISDFILFSVNSGYDIMGIKYNK 121 (377)
Q Consensus 65 --------a--v~~~~ly~td~~~~~I~~~~-~-~g~~~~~~~~----------~~~-p~~i~v~~~~~~~~~~~~~C~~ 121 (377)
. ..+.+||++....++|..+| . +-..+++... +.. |.++..
T Consensus 82 ss~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~---------------- 145 (462)
T 2ece_A 82 SSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC---------------- 145 (462)
T ss_dssp GGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE----------------
T ss_pred hhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE----------------
Confidence 2 45889999999999999999 3 2222333221 111 332221
Q ss_pred CCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC------CCeEEEEEcCCCCceeeEEEEecCCCCc--eEEEEEE
Q psy5792 122 NESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS------GYDIMGIKYNKNESKVTQVLGPLSKVSL--AAKVDFH 193 (377)
Q Consensus 122 ~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~------~~~I~~~~l~~~~~~~~~~~~~~~~~~~--~~~l~~d 193 (377)
.+ +. ++++... .|.|..++...... ....+...... +..+-+.
T Consensus 146 ---------~p----------------dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v---~~~~~~~~~~~~~~Yd~~~~ 196 (462)
T 2ece_A 146 ---------GP----------------DA-IYISALGNEEGEGPGGILMLDHYSFEP---LGKWEIDRGDQYLAYDFWWN 196 (462)
T ss_dssp ---------CS----------------SC-EEEEEEEETTSCSCCEEEEECTTTCCE---EEECCSBCTTCCCCCCEEEE
T ss_pred ---------CC----------------Ce-EEEEcCCCcCCCCCCeEEEEECCCCeE---EEEEccCCCCccccceEEEC
Confidence 11 11 2222211 13366665554322 11222222222 3335557
Q ss_pred CCCCEEEEEEc------------------CCCcEEEEEcCCCCcEEEEeccccCCCCC--CCCcceEEE--eccCCeEEE
Q psy5792 194 AAEDYIYWVDI------------------DHGTISRTHRDGTGRENIIEYVETGDPTP--VDQFTDIAV--DWIAQNIYW 251 (377)
Q Consensus 194 ~~~~~ly~sd~------------------~~~~I~~~~~~G~~~~~i~~~~~~~~~~~--~~~p~~iav--D~~~~~lYw 251 (377)
+..+.+|.++. ..++|...+++.......+. .+ -..|..|++ ++.+..+|+
T Consensus 197 p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~-------vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 197 LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT-------LGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE-------SCTTEEEEEEEEECSSTTCCEEEE
T ss_pred CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe-------cCCCCCccceeEeeECCCCCEEEE
Confidence 77888888873 36899999998532111222 11 124888877 888899999
Q ss_pred EcC-----CCCEEEEEEcCCCe---EEEE-eeC-----C-----------CCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 252 SDP-----KENVIEVARLTGQY---RYVL-ISG-----G-----------VDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 252 td~-----~~~~I~~~~~~g~~---~~~l-~~~-----~-----------~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
+.. ..++|.++..++.. .+++ +.. . ...|.+|++.+...+||+++++ ...|...
T Consensus 270 ~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg-~d~Vavf 348 (462)
T 2ece_A 270 NMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG-IGEVRQY 348 (462)
T ss_dssp EEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT-TTEEEEE
T ss_pred EEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC-CCEEEEE
Confidence 998 88889887776532 1111 111 0 2468999999999999999998 5788888
Q ss_pred ecC-CCCeEEEEecCCC----------------CceEEEEeCCCCEEEEEE------------eCCCCeEEEEEcc
Q psy5792 307 GLD-GKKQTILAQEIIM----------------PIKDITLDRKNKRVYWCY------------SVGSNVLESMDYS 353 (377)
Q Consensus 307 ~ld-G~~~~~l~~~~~~----------------~P~glalD~~~~~LYw~d------------~~~~~~i~~~~~~ 353 (377)
+.+ ....+.+-.-... .|.++++++.+++||++. ......+.+++.|
T Consensus 349 dV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd 424 (462)
T 2ece_A 349 DISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNAN 424 (462)
T ss_dssp ECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEEC
T ss_pred EecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEec
Confidence 874 3333322221122 599999999999999998 1145677766444
No 112
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.06 E-value=4e-08 Score=92.94 Aligned_cols=170 Identities=11% Similarity=0.092 Sum_probs=115.8
Q ss_pred CCCeEEEEEcCCCCceeeEEEEecCC------CCceEEEEEECC---CCEEEEEEcCC--C--cEEEEEcCCCCcEEEEe
Q psy5792 158 SGYDIMGIKYNKNESKVTQVLGPLSK------VSLAAKVDFHAA---EDYIYWVDIDH--G--TISRTHRDGTGRENIIE 224 (377)
Q Consensus 158 ~~~~I~~~~l~~~~~~~~~~~~~~~~------~~~~~~l~~d~~---~~~ly~sd~~~--~--~I~~~~~~G~~~~~i~~ 224 (377)
..|.|..++++.... ....+.+.+ .-+|.|+++... ..+||++|... . .|++++.++.. .+++.
T Consensus 81 ~~G~I~~~d~~~~~~--~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~-~~~~~ 157 (355)
T 3sre_A 81 KSGKILLMDLNEKEP--AVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS-LLHLK 157 (355)
T ss_dssp -CCEEEEEETTSSSC--CEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE-EEEEE
T ss_pred CCCeEEEEecCCCCC--ceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE-EEEEe
Confidence 456799999874322 122233333 237999999662 34799999763 2 46667776543 33333
Q ss_pred ccccCCCCCCCCcceEEEeccCCeEEEEcC-----------------CCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcC
Q psy5792 225 YVETGDPTPVDQFTDIAVDWIAQNIYWSDP-----------------KENVIEVARLTGQYRYVLISGGVDQPSALAVDP 287 (377)
Q Consensus 225 ~~~~~~~~~~~~p~~iavD~~~~~lYwtd~-----------------~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp 287 (377)
..+. ..+..|+++++|. .+.+|+++. ..++|++++.+ ..+++.. ++..|+|||++|
T Consensus 158 ~~~g---~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~-~l~~pNGia~sp 230 (355)
T 3sre_A 158 TIRH---KLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE-GFDFANGINISP 230 (355)
T ss_dssp EECC---TTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE-EESSEEEEEECT
T ss_pred cccc---CCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec-CCcccCcceECC
Confidence 1111 4577899999995 688888764 23678888873 3444544 588999999999
Q ss_pred CCCeEEEEecCCCCeEEEEecCCCC----eEEEEecCCCCceEEEEeCCCCEEEEEE
Q psy5792 288 ESGYLFWSESGKIPLIARAGLDGKK----QTILAQEIIMPIKDITLDRKNKRVYWCY 340 (377)
Q Consensus 288 ~~g~lywtd~g~~~~I~r~~ldG~~----~~~l~~~~~~~P~glalD~~~~~LYw~d 340 (377)
.+..||++|.. ..+|++.++++.+ ++++ .. -..|.|+++|.++++||.+.
T Consensus 231 Dg~~lYvadt~-~~~I~~~~~~~~g~l~~~~~~-~~-~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 231 DGKYVYIAELL-AHKIHVYEKHANWTLTPLRVL-SF-DTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp TSSEEEEEEGG-GTEEEEEEECTTSCEEEEEEE-EC-SSEEEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEeCC-CCeEEEEEECCCCcEecCEEE-eC-CCCCceEEEeCCCCcEEEEe
Confidence 98999999985 6899999987533 2333 32 46899999996468899865
No 113
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.05 E-value=5.4e-08 Score=89.65 Aligned_cols=258 Identities=8% Similarity=0.009 Sum_probs=156.6
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCC----CCceEEEEE--ECCeEEEEcC-----------C
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPD----AAQVVAAVF--YKGRIIYSDA-----------N 77 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~----~~~p~~lav--~~~~ly~td~-----------~ 77 (377)
.|.+++++++++++|++....+.|..+|+.+. ..++. ... ...|.++++ .+++||+++. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID-LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE-CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE-cCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 48999999999899999999999999998765 44453 121 126788888 4558999952 3
Q ss_pred CCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe
Q psy5792 78 DGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV 156 (377)
Q Consensus 78 ~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~ 156 (377)
.+.|..++ .+++....+.....|.++.+ +++.. .++++
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~-s~dg~---------------------------------------~l~~~- 152 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAW-ARDGS---------------------------------------KLYGL- 152 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEE-CTTSS---------------------------------------CEEEE-
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEE-CCCCC---------------------------------------EEEEe-
Confidence 57898888 55555444443323555553 33221 35555
Q ss_pred CCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCC-----------------------cEEEEE
Q psy5792 157 NSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHG-----------------------TISRTH 213 (377)
Q Consensus 157 ~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~-----------------------~I~~~~ 213 (377)
... |..+++..... ....+......+. .+.+.+..||++....+ .|+.++
T Consensus 153 ~~~--i~~~d~~~~~~---~~~~~~~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 225 (337)
T 1pby_B 153 GRD--LHVMDPEAGTL---VEDKPIQSWEAET--YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225 (337)
T ss_dssp SSS--EEEEETTTTEE---EEEECSTTTTTTT--BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEE
T ss_pred CCe--EEEEECCCCcE---eeeeeccccCCCc--eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEe
Confidence 333 88888865532 1112222111222 33444555555443332 356677
Q ss_pred cCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEE
Q psy5792 214 RDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLF 293 (377)
Q Consensus 214 ~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly 293 (377)
+.......+... .....|.++++++.++.||.+ .++|.+.+++.......+.. ...|.+++++|...+||
T Consensus 226 ~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~ 295 (337)
T 1pby_B 226 LETGEMAMREVR------IMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVW 295 (337)
T ss_dssp TTTCCEEEEEEE------ECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEE
T ss_pred CCCCCceEeecC------CCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEE
Confidence 664433221110 122468899999988889988 47899999987654444443 35799999999878898
Q ss_pred EEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEE
Q psy5792 294 WSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWC 339 (377)
Q Consensus 294 wtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~ 339 (377)
.+.. ...|...++........+... ..|. +.+ ...++|+.
T Consensus 296 ~~~~--~~~i~v~d~~~~~~~~~~~~~-~~~~-~~~--~~~~~~~~ 335 (337)
T 1pby_B 296 LGGA--LGDLAAYDAETLEKKGQVDLP-GNAS-MSL--ASVRLFTR 335 (337)
T ss_dssp EESB--SSEEEEEETTTCCEEEEEECG-GGCC-CBT--CCCEEEEC
T ss_pred EEcC--CCcEEEEECcCCcEEEEEEcC-CCCc-eeE--eeeEEEec
Confidence 8843 578999988754433333321 1232 222 45677764
No 114
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.00 E-value=6.9e-07 Score=81.52 Aligned_cols=231 Identities=14% Similarity=0.034 Sum_probs=152.6
Q ss_pred CCeEEEEcCCCCceEEEc-CCCCceEEEecCC--CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCC
Q psy5792 68 KGRIIYSDANDGNIRSIN-LDGSNSTVLRNNA--GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDF 144 (377)
Q Consensus 68 ~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~--~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~ 144 (377)
.+.+++++..++.|..++ .+|+..-.+.... .+.++.+ .++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~-~pd----------------------------------- 47 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA-TKA----------------------------------- 47 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE-CTT-----------------------------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE-CCC-----------------------------------
Confidence 468888888889999999 4888766554322 2444443 111
Q ss_pred CcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC-CCcEEEEEcCCCCcEEEE
Q psy5792 145 HAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID-HGTISRTHRDGTGRENII 223 (377)
Q Consensus 145 C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~-~~~I~~~~~~G~~~~~i~ 223 (377)
..++++.... |..++.++... ..+.......+.+..+.+ ++.+++++.. .++|+.++.+|.....+.
T Consensus 48 -----G~ilvs~~~~--V~~~d~~G~~~----W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~ 115 (276)
T 3no2_A 48 -----GEILFSYSKG--AKMITRDGREL----WNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTE 115 (276)
T ss_dssp -----SCEEEECBSE--EEEECTTSCEE----EEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECTTSCEEEEEE
T ss_pred -----CCEEEeCCCC--EEEECCCCCEE----EEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEe
Confidence 1244454443 77776644321 111211112345566655 6677777766 778988888886544443
Q ss_pred eccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5792 224 EYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLI 303 (377)
Q Consensus 224 ~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I 303 (377)
.. .........|.+++++. ++++++++...++|..++++|+..-.+-.. ..|.++++.+ +|.+++++.. ..+|
T Consensus 116 ~~--~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~--~~~~~~~~~~-~g~~~v~~~~-~~~v 188 (276)
T 3no2_A 116 FE--TGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQLLNSVKLS--GTPFSSAFLD-NGDCLVACGD-AHCF 188 (276)
T ss_dssp EC--CSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSCEEEEEECS--SCCCEEEECT-TSCEEEECBT-TSEE
T ss_pred cc--CCCCcccccccCceECC-CCCEEEEecCCCEEEEECCCCCEEEEEECC--CCccceeEcC-CCCEEEEeCC-CCeE
Confidence 21 00001123477888885 678889999999999999998876555432 4689999986 7888888864 5789
Q ss_pred EEEecC-CCCeEEEEecC-----CCCceEEEEeCCCCEEEEEEeCCC----------CeEEEEEccCC
Q psy5792 304 ARAGLD-GKKQTILAQEI-----IMPIKDITLDRKNKRVYWCYSVGS----------NVLESMDYSGG 355 (377)
Q Consensus 304 ~r~~ld-G~~~~~l~~~~-----~~~P~glalD~~~~~LYw~d~~~~----------~~i~~~~~~G~ 355 (377)
..++.+ |+....+-..+ +..|.+++++ .++.+|+++. .. .++..++.+|.
T Consensus 189 ~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~-~~G~i~v~~~-~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 189 VQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL-QNGGLYICNW-QGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp EEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC-TTSCEEEEEE-CTTCTTGGGSCCCSEEEECTTSB
T ss_pred EEEeCcCCcEEEEecCCCCCCccccccccceEc-CCCCEEEEec-cCccccccccCCceEEEECCCCC
Confidence 999998 88877776432 5569999997 5899999996 33 35777777764
No 115
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.98 E-value=2.2e-06 Score=81.25 Aligned_cols=272 Identities=12% Similarity=0.016 Sum_probs=156.9
Q ss_pred CCCeEEEEeCC-----CCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcC---------CCCceEEEc-C
Q psy5792 26 SGPFVYGVKTL-----SHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDA---------NDGNIRSIN-L 86 (377)
Q Consensus 26 ~~~~ly~~d~~-----~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~---------~~~~I~~~~-~ 86 (377)
+..++|+++.. .+.|..+|.+.. ..++ .....| ++++ .+.++|+++. ..+.|..++ .
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i---~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMV---PTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEE---ECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEe---cCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 34689999865 468999997654 5555 345678 9999 5678999974 234688888 5
Q ss_pred CCCceEEEecC-------CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC-
Q psy5792 87 DGSNSTVLRNN-------AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS- 158 (377)
Q Consensus 87 ~g~~~~~~~~~-------~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~- 158 (377)
+++....+.-. ..|.++++ +++. .+|++++..
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~-spdg---------------------------------------~~l~v~n~~~ 129 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQ-TTDG---------------------------------------KFIVLQNASP 129 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEE-CTTS---------------------------------------SEEEEEEESS
T ss_pred CCcEEEEEEcCccccccCCCcceEEE-CCCC---------------------------------------CEEEEECCCC
Confidence 56655444321 12666664 3332 267777643
Q ss_pred CCeEEEEEcCCCCceeeEEEEe-cCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEE-EEeccccCCCCCCCC
Q psy5792 159 GYDIMGIKYNKNESKVTQVLGP-LSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGREN-IIEYVETGDPTPVDQ 236 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~-i~~~~~~~~~~~~~~ 236 (377)
.+.|..+++..... +.. +. .....++.+.+.+...|++....+++..+..+...... ... .... ...-..
T Consensus 130 ~~~v~v~d~~~~~~-----~~~~i~-~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~-~~~~-~~~~~~ 201 (361)
T 2oiz_A 130 ATSIGIVDVAKGDY-----VEDVTA-AAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSR-SKQM-FSVKDD 201 (361)
T ss_dssp SEEEEEEETTTTEE-----EEEEGG-GTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEE-CCCC-SCTTTS
T ss_pred CCeEEEEECCCCcE-----EEEEec-CCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeecc-ccce-EcCCCC
Confidence 45699998876522 222 21 12223344445444556665566666666654322221 110 0000 001112
Q ss_pred cceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee--C-------CCCCcee---EEEcCCCCeEEEEec--C----
Q psy5792 237 FTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS--G-------GVDQPSA---LAVDPESGYLFWSES--G---- 298 (377)
Q Consensus 237 p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~--~-------~~~~P~~---iavdp~~g~lywtd~--g---- 298 (377)
|..+..-+..+.+++... .+++.+.++.+.....+-. . ....|.+ ++++|..+++|++.. +
T Consensus 202 ~~~~~~~~~g~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 202 PIFIAPALDKDKAHFVSY-YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp CBCSCCEECSSEEEEEBT-TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred ceEEEecccCCEEEEEeC-CCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 433333333456666654 4688888887654322211 0 0112444 999999999999864 1
Q ss_pred ---CCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 299 ---KIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 299 ---~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
....|...++.......-+... . |.+|++++.+++||.+. . +.|..++...+
T Consensus 281 ~~~~~~~v~viD~~t~~~v~~i~~~-~-p~~ia~spdg~~l~v~n--~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKTKQRVARIPGR-D-ALSMTIDQQRNLMLTLD--G-GNVNVYDISQP 335 (361)
T ss_dssp TTCCCSEEEEEETTTTEEEEEEECT-T-CCEEEEETTTTEEEEEC--S-SCEEEEECSSS
T ss_pred ccCCCceEEEEECCCCcEEEEEecC-C-eeEEEECCCCCEEEEeC--C-CeEEEEECCCC
Confidence 1347888887654333223322 3 99999999889998765 3 78888888754
No 116
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.97 E-value=3.1e-08 Score=91.98 Aligned_cols=161 Identities=16% Similarity=0.157 Sum_probs=115.1
Q ss_pred ceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCC--CCCCCCcceEEE---eccCCeEEE-EcC-----
Q psy5792 186 LAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGD--PTPVDQFTDIAV---DWIAQNIYW-SDP----- 254 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~--~~~~~~p~~iav---D~~~~~lYw-td~----- 254 (377)
-|.+.++|..++++|+++...++|.++++++...+.+.- .... .+....|.||.+ |+. ++|++ ++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~--~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVI--DGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECC--TTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEec--CCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 377889999899999999999999999998654444422 0000 012235889999 775 78877 442
Q ss_pred -------CCCEEEEEEcC----CCeEEEE-eeC-----------CCCCceeEEEcCCCCeEEEEecCCC-CeEEEEecCC
Q psy5792 255 -------KENVIEVARLT----GQYRYVL-ISG-----------GVDQPSALAVDPESGYLFWSESGKI-PLIARAGLDG 310 (377)
Q Consensus 255 -------~~~~I~~~~~~----g~~~~~l-~~~-----------~~~~P~~iavdp~~g~lywtd~g~~-~~I~r~~ldG 310 (377)
....+.+.+++ |+....+ +.. ....|.++++|+ .|.+|+++.. . +.|.|++.||
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~-~~~~I~rV~pdG 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFAL-GMPAIARVSADG 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEE-SSCEEEEECTTS
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCC-CCCeEEEEeCCC
Confidence 24679999999 4433222 110 123489999997 8999999975 5 8999999999
Q ss_pred CCeEEEEecC-----CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 311 KKQTILAQEI-----IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 311 ~~~~~l~~~~-----~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
+......... ...|+||++++.+..|+..+. .++|.++++.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~--~g~L~~fD~~ 214 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG--PRALTAFDVS 214 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS--SSSEEEEECS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC--CCeEEEEcCC
Confidence 9666554331 223789999987777877776 7889999977
No 117
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.96 E-value=1.4e-07 Score=88.16 Aligned_cols=153 Identities=14% Similarity=0.077 Sum_probs=113.8
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVAR 263 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~ 263 (377)
...+.+..+++.++.+||+|...+.|+++++++...+.+.. -..|.+|++++ .+++|++.. ..|.+.+
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~---------~~~v~~i~~~~-dg~l~v~~~--~gl~~~d 115 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL---------PFMGSALAKIS-DSKQLIASD--DGLFLRD 115 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC---------SSCEEEEEEEE-TTEEEEEET--TEEEEEE
T ss_pred CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC---------CCcceEEEEeC-CCeEEEEEC--CCEEEEE
Confidence 34578889999889999999988999999998654333322 23689999996 577877763 4699999
Q ss_pred cCCCeEEEEeeCC----CCCceeEEEcCCCCeEEEEecC-----CCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCC
Q psy5792 264 LTGQYRYVLISGG----VDQPSALAVDPESGYLFWSESG-----KIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNK 334 (377)
Q Consensus 264 ~~g~~~~~l~~~~----~~~P~~iavdp~~g~lywtd~g-----~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~ 334 (377)
+++...+.+.... ...|.++++|| .|.+|+++.+ ....|++.+ +|+.. .+.. .+..|+++++++.++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~~-~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLFA-DISIPNSICFSPDGT 191 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEEE-EESSEEEEEECTTSC
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-EeeC-CCcccCCeEEcCCCC
Confidence 8765544444321 24689999998 6788888753 136899998 65432 3333 356899999998888
Q ss_pred EEEEEEeCCCCeEEEEEcc
Q psy5792 335 RVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 335 ~LYw~d~~~~~~i~~~~~~ 353 (377)
.||+++. ..+.|.+++++
T Consensus 192 ~lyv~~~-~~~~I~~~d~~ 209 (326)
T 2ghs_A 192 TGYFVDT-KVNRLMRVPLD 209 (326)
T ss_dssp EEEEEET-TTCEEEEEEBC
T ss_pred EEEEEEC-CCCEEEEEEcc
Confidence 9999999 88999999985
No 118
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=1.3e-07 Score=94.27 Aligned_cols=289 Identities=9% Similarity=-0.014 Sum_probs=176.2
Q ss_pred CCcCCccccccC-----CCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE----ECCeEEEEc--------
Q psy5792 14 SFGAVASTLKPQ-----SGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF----YKGRIIYSD-------- 75 (377)
Q Consensus 14 ~~~~~~~~~~d~-----~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav----~~~~ly~td-------- 75 (377)
+.+.+. .++.. ++.+||+.+...++|.++|++.. ...++..+....|.|+++ ..++||+++
T Consensus 84 ~gd~hh-~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~ 162 (595)
T 1fwx_A 84 NGDLHH-VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVN 162 (595)
T ss_dssp CCCBCC-EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSC
T ss_pred cCCCCc-cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCC
Confidence 344444 55555 66799999999999999999998 555543355678999997 478999994
Q ss_pred ---------CCCCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccc-------
Q psy5792 76 ---------ANDGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSL------- 138 (377)
Q Consensus 76 ---------~~~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~------- 138 (377)
...+.+..+| .+.+....+.-+..|.++.+ +++.. +.=. .|.++.....
T Consensus 163 dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~-spdGk--~~~v-----------t~~~se~~~~i~~~~~~ 228 (595)
T 1fwx_A 163 DGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDA-DYEGK--WAFS-----------TSYNSEKGMTLPEMTAA 228 (595)
T ss_dssp SSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEE-CSSSS--EEEE-----------EESCTTCCSSHHHHTCC
T ss_pred CCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEE-CCCCC--EEEE-----------EecCcccCcchhhcccc
Confidence 4445677777 44444333333224767765 22221 0000 0111111000
Q ss_pred cCCcC---------CCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcE
Q psy5792 139 AAKVD---------FHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTI 209 (377)
Q Consensus 139 ~~G~~---------~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I 209 (377)
...+. .......++.+ +. +..++......+..-...| ....|.++++.+.+.++|+++...+.|
T Consensus 229 ~~d~v~V~~~~~~~~~v~~Gk~~~i---~~--V~VID~~~~~~~~~~~~Ip--vg~~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 229 EMDHIVVFNIAEIEKAIAAGDYQEL---NG--VKVVDGRKEASSLFTRYIP--IANNPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp SEEEEEEEEHHHHHHHHHHTCSEEE---TT--EEEEECSGGGCCSSEEEEE--EESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred ccceEEEeeccceeEeccCCCeeEE---Cc--EEEEeCcccCCceeEEEEe--cCCCceEEEEcCCCCEEEEeCCCCCeE
Confidence 00000 00000112222 33 8888776411100011222 235799999999999999999999999
Q ss_pred EEEEcCCCC---------c-EEEEeccccCCCCCC-CCcceEEEeccCCeEEEEcCCCCEEEEEEcCCC--------eEE
Q psy5792 210 SRTHRDGTG---------R-ENIIEYVETGDPTPV-DQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQ--------YRY 270 (377)
Q Consensus 210 ~~~~~~G~~---------~-~~i~~~~~~~~~~~~-~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~--------~~~ 270 (377)
..++.+... . .++.. ..+ ..|..+++|+.+ ++|.+....+.|.+.+++.. ...
T Consensus 302 sVid~~~~~~~~~~~l~~~~~v~~~-------v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~ 373 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPRSAVVAE-------PELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDP 373 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGGGGEEEC-------CBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCC
T ss_pred EEEECcccccccccccCcccceEEE-------cCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccce
Confidence 999987310 0 12222 122 359999999865 99999999999999998761 122
Q ss_pred EEeeC-CCCCc------eeEEEcCCCCeEEEEecCCCCeE-----------EEEecCCCCeEEEEec-CCCCceEEEEeC
Q psy5792 271 VLISG-GVDQP------SALAVDPESGYLFWSESGKIPLI-----------ARAGLDGKKQTILAQE-IIMPIKDITLDR 331 (377)
Q Consensus 271 ~l~~~-~~~~P------~~iavdp~~g~lywtd~g~~~~I-----------~r~~ldG~~~~~l~~~-~~~~P~glalD~ 331 (377)
++-.. -..+| .++++.|...+||.++.++.-++ ..++++|...+.+... ....|...++++
T Consensus 374 vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~ 453 (595)
T 1fwx_A 374 IKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVH 453 (595)
T ss_dssp EEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEEC
T ss_pred eEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEcc
Confidence 22111 13456 78888999999999997643455 6677777665554332 267899999886
Q ss_pred C
Q psy5792 332 K 332 (377)
Q Consensus 332 ~ 332 (377)
.
T Consensus 454 ~ 454 (595)
T 1fwx_A 454 P 454 (595)
T ss_dssp T
T ss_pred H
Confidence 4
No 119
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.93 E-value=4.6e-08 Score=93.17 Aligned_cols=262 Identities=8% Similarity=-0.030 Sum_probs=153.7
Q ss_pred CcCCccccccCCCCeEEEEeC---------CCCcEEEEEcCCc--EEEEEeCC-----CCCceEEEEE--ECCeEEEEcC
Q psy5792 15 FGAVASTLKPQSGPFVYGVKT---------LSHSLHYVNIEVK--VAKVVSMP-----DAAQVVAAVF--YKGRIIYSDA 76 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~---------~~~~I~~~~~dG~--~~~i~~~~-----~~~~p~~lav--~~~~ly~td~ 76 (377)
...| +++++++++++|++++ ..+.|..+|+... ..+|-... ....|.++++ .+.++|+++.
T Consensus 65 G~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 65 AFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp CTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred CCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEcc
Confidence 4578 9999999999999984 4688999999877 66653110 1357999999 6779999997
Q ss_pred C-CCceEE--Ec-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEE
Q psy5792 77 N-DGNIRS--IN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFI 152 (377)
Q Consensus 77 ~-~~~I~~--~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l 152 (377)
. .+.+.. +| .+ ...+.. ++|.|+- + .+ ...
T Consensus 144 ~~~~~v~V~~iD~~t---v~~i~v---------------------------~~~~~~~-p--~g-------------~~~ 177 (368)
T 1mda_H 144 GSSAAAGLSVPGASD---DQLTKS---------------------------ASCFHIH-P--GA-------------AAT 177 (368)
T ss_dssp SSSCEEEEEETTTEE---EEEEEC---------------------------SSCCCCE-E--EE-------------TTE
T ss_pred CCCCeEEEEEEchhh---ceEEEC---------------------------CCceEEc-c--CC-------------CeE
Confidence 6 456777 77 33 233321 1121110 0 00 012
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEE----ecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecccc
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLG----PLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVET 228 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~----~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~ 228 (377)
+++....|++..++++.....-...+. .+.....|. + ....+.+||+.. +.+..++..+...+.+... ..
T Consensus 178 ~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~-~~ 251 (368)
T 1mda_H 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAI-DG 251 (368)
T ss_dssp EECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCC-CS
T ss_pred EEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEE-Ee
Confidence 222222233555665540000000000 011123455 3 555788898886 8999999875433333210 00
Q ss_pred CCC---CCCCCcce---EEEeccCCeEEEEcC---C-----CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEE
Q psy5792 229 GDP---TPVDQFTD---IAVDWIAQNIYWSDP---K-----ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFW 294 (377)
Q Consensus 229 ~~~---~~~~~p~~---iavD~~~~~lYwtd~---~-----~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lyw 294 (377)
... .....|.+ +++++.++++|++.. . .+.+.++++.......-+.. ...|.+|+++|...++|+
T Consensus 252 ~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v-g~~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNY 330 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEE
T ss_pred ccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC-CCCcceEEECCCCCEEEE
Confidence 000 01113666 899998999999865 2 24566999876543222222 236999999998778999
Q ss_pred EecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeC
Q psy5792 295 SESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDR 331 (377)
Q Consensus 295 td~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~ 331 (377)
+.......|..+++.......-+.. -..|.||+++.
T Consensus 331 a~~~~~~~VsVID~~t~kvv~~I~v-g~~P~~i~~~~ 366 (368)
T 1mda_H 331 ANSAGTEVLDIYDAASDQDQSSVEL-DKGPESLSVQN 366 (368)
T ss_dssp EEETTTTEEEEEESSSCEEEEECCC-CSCCCEEECCC
T ss_pred EccCCCCeEEEEECCCCcEEEEEEC-CCCCCEEEeec
Confidence 9872268999999875433322332 46799999853
No 120
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.92 E-value=1.5e-06 Score=79.34 Aligned_cols=240 Identities=10% Similarity=0.004 Sum_probs=150.9
Q ss_pred CeEEEEeCCCCcEEEEEc-CCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEEecCC--Ccee
Q psy5792 28 PFVYGVKTLSHSLHYVNI-EVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVLRNNA--GISD 102 (377)
Q Consensus 28 ~~ly~~d~~~~~I~~~~~-dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~--~p~~ 102 (377)
++++++++..+.|..+|. +|+ +-++- ......+.++++ .+++++++. .+.|..++.+|+.+-.+.... .+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~-~~~~~~~~~~~~~pdG~ilvs~--~~~V~~~d~~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATKAGEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEE-CCTTCCCCEEEECTTSCEEEEC--BSEEEEECTTSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeC-CCccCCCcCeEECCCCCEEEeC--CCCEEEECCCCCEEEEEcCCCCccccc
Confidence 478889999999999999 888 66553 122246788888 677888853 567999998887765554321 1222
Q ss_pred EEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC-CCeEEEEEcCCCCceeeEEEEec
Q psy5792 103 FILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS-GYDIMGIKYNKNESKVTQVLGPL 181 (377)
Q Consensus 103 i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~-~~~I~~~~l~~~~~~~~~~~~~~ 181 (377)
..+ .+ +.-++++... .+.+..++.++... ....+
T Consensus 82 ~~~-~~----------------------------------------dG~~lv~~~~~~~~v~~vd~~Gk~l----~~~~~ 116 (276)
T 3no2_A 82 ARI-LP----------------------------------------DGNALVAWCGHPSTILEVNMKGEVL----SKTEF 116 (276)
T ss_dssp EEE-CT----------------------------------------TSCEEEEEESTTEEEEEECTTSCEE----EEEEE
T ss_pred cEE-CC----------------------------------------CCCEEEEecCCCCEEEEEeCCCCEE----EEEec
Confidence 221 11 1123444332 33354444444321 11111
Q ss_pred CC-----CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC
Q psy5792 182 SK-----VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE 256 (377)
Q Consensus 182 ~~-----~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~ 256 (377)
.. ...+.+++++. ++.+++++...++|..++.+|.....+-. -..|.++++++ ++++++++...
T Consensus 117 ~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~~~w~~~~---------~~~~~~~~~~~-~g~~~v~~~~~ 185 (276)
T 3no2_A 117 ETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQLLNSVKL---------SGTPFSSAFLD-NGDCLVACGDA 185 (276)
T ss_dssp CCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSCEEEEEEC---------SSCCCEEEECT-TSCEEEECBTT
T ss_pred cCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCCCCEEEEEEC---------CCCccceeEcC-CCCEEEEeCCC
Confidence 11 11244555665 56677888888999999999755444432 24688888884 78899999888
Q ss_pred CEEEEEEcC-CCeEEEEeeC-----CCCCceeEEEcCCCCeEEEEec-CC--------CCeEEEEecCCCCeEEEEec-C
Q psy5792 257 NVIEVARLT-GQYRYVLISG-----GVDQPSALAVDPESGYLFWSES-GK--------IPLIARAGLDGKKQTILAQE-I 320 (377)
Q Consensus 257 ~~I~~~~~~-g~~~~~l~~~-----~~~~P~~iavdp~~g~lywtd~-g~--------~~~I~r~~ldG~~~~~l~~~-~ 320 (377)
++|..++++ |+..-.+-.. .+..|.++++.+ +|.+|++++ +. ..++..++.+|.-...+-.. .
T Consensus 186 ~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~ 264 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVK 264 (276)
T ss_dssp SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTT
T ss_pred CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC-CCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCccc
Confidence 899999999 8876666432 245689999997 899999996 31 33566666666554443332 2
Q ss_pred CCCceEE
Q psy5792 321 IMPIKDI 327 (377)
Q Consensus 321 ~~~P~gl 327 (377)
+..++++
T Consensus 265 ~~~~~~~ 271 (276)
T 3no2_A 265 FGMISTI 271 (276)
T ss_dssp SCCCCEE
T ss_pred ccceeee
Confidence 4455543
No 121
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=2.8e-07 Score=91.98 Aligned_cols=255 Identities=11% Similarity=0.015 Sum_probs=158.8
Q ss_pred ECCeEEEEcCCCCceEEEc-CCCCceEEEe--cCCCceeEEeee-cCCCCcccCCCcCCCCCCceeccccCCCccccCCc
Q psy5792 67 YKGRIIYSDANDGNIRSIN-LDGSNSTVLR--NNAGISDFILFS-VNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKV 142 (377)
Q Consensus 67 ~~~~ly~td~~~~~I~~~~-~~g~~~~~~~--~~~~p~~i~v~~-~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~ 142 (377)
.+.+||++|..+.+|.+++ .+.+...++. ...+|.|+++.. |+..
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~------------------------------- 148 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN------------------------------- 148 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS-------------------------------
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc-------------------------------
Confidence 5779999999999999999 5566555443 233499998755 4432
Q ss_pred CCCcCCCcEEEEEeC-----------------CCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC
Q psy5792 143 DFHAGISDFILFSVN-----------------SGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID 205 (377)
Q Consensus 143 ~~C~~~~~~l~~s~~-----------------~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~ 205 (377)
+++++.. ..+.+..++.+.... ...+++. .+|.++++++.++++|+++..
T Consensus 149 --------~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v---~~qI~Vg--g~pd~~~~spdGk~~~vt~~~ 215 (595)
T 1fwx_A 149 --------YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV---AWQVLVS--GNLDNCDADYEGKWAFSTSYN 215 (595)
T ss_dssp --------EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE---EEEEEES--SCCCCEEECSSSSEEEEEESC
T ss_pred --------EEEEecccccccCCCCcccccccccCceEEEEECCCCeE---EEEEEeC--CCccceEECCCCCEEEEEecC
Confidence 2222211 111366666665422 1222333 378999999999999999976
Q ss_pred CC--------------cEEEEEc--------CCCC----cEEEEeccc--cCC----CCCCCCcceEEEeccCCeEEEEc
Q psy5792 206 HG--------------TISRTHR--------DGTG----RENIIEYVE--TGD----PTPVDQFTDIAVDWIAQNIYWSD 253 (377)
Q Consensus 206 ~~--------------~I~~~~~--------~G~~----~~~i~~~~~--~~~----~~~~~~p~~iavD~~~~~lYwtd 253 (377)
+. .|...+. +|.. .-.++.... ... ..--..|.|+++.+.++.+|+++
T Consensus 216 se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~ 295 (595)
T 1fwx_A 216 SEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG 295 (595)
T ss_dssp TTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC
T ss_pred cccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeC
Confidence 52 2332221 1210 011111100 000 00113699999999999999999
Q ss_pred CCCCEEEEEEcCCCe------------EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC-------CC-e
Q psy5792 254 PKENVIEVARLTGQY------------RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-------KK-Q 313 (377)
Q Consensus 254 ~~~~~I~~~~~~g~~------------~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG-------~~-~ 313 (377)
...++|.+++.+... ...-+. -...|+.+++||. |++|.+.+- .+.|.+.+++. .. .
T Consensus 296 ~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~d-G~aY~t~~l-dsqV~kwdi~~a~~~~~g~~~~ 372 (595)
T 1fwx_A 296 KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGR-GNAYTSLFL-DSQVVKWNIEDAIRAYAGEKVD 372 (595)
T ss_dssp TTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTT-SEEEEEETT-TTEEEEEEHHHHHHHHHTCSCC
T ss_pred CCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCC-CeEEEEEec-CCcEEEEEhhHhhhhhcccccc
Confidence 999999999998431 111112 2356999999995 599999875 68888888764 11 2
Q ss_pred EEEEecC-CCCc------eEEEEeCCCCEEEEEEeCCC-CeE-----------EEEEccCCceEEEEecCCCCCc
Q psy5792 314 TILAQEI-IMPI------KDITLDRKNKRVYWCYSVGS-NVL-----------ESMDYSGGSKMQLKLSSNIKNA 369 (377)
Q Consensus 314 ~~l~~~~-~~~P------~glalD~~~~~LYw~d~~~~-~~i-----------~~~~~~G~~~~~~~~~~~~~~p 369 (377)
+++-.-. -.+| .|+++...+++||.+.. .. +++ +-+++.|+..+.+.......+|
T Consensus 373 ~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk-~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~eP 446 (595)
T 1fwx_A 373 PIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK-FSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEP 446 (595)
T ss_dssp CEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES-CCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCC
T ss_pred eeEEEeecccccccceeccceEeCCCCCEEEEcCC-CCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCC
Confidence 2222211 2345 56777888999999998 55 666 7888887655555444445555
No 122
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.91 E-value=1.2e-07 Score=90.31 Aligned_cols=264 Identities=6% Similarity=-0.064 Sum_probs=161.9
Q ss_pred CCCeEEEEeCCCC----cEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcC---------CCCceEEEc-CC
Q psy5792 26 SGPFVYGVKTLSH----SLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDA---------NDGNIRSIN-LD 87 (377)
Q Consensus 26 ~~~~ly~~d~~~~----~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~---------~~~~I~~~~-~~ 87 (377)
...++|+++...+ .|..+|++.. ..++ .....| ++++ .+.++|+++. ..+.|..+| .+
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i---~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHS---LGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE---EECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEE---eCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 3468999999877 8889999877 5555 334568 8999 6779999983 357899999 77
Q ss_pred CCceEEEecC--------CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC-
Q psy5792 88 GSNSTVLRNN--------AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS- 158 (377)
Q Consensus 88 g~~~~~~~~~--------~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~- 158 (377)
++....+.-. ..|.++.+ +++.+ ++++++..
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~-SpDGk---------------------------------------~lyVan~~~ 145 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGN-CASSA---------------------------------------CLLFFLFGS 145 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEE-CTTSS---------------------------------------CEEEEECSS
T ss_pred CCEEEEEECCCccccccCCCcceEEE-cCCCC---------------------------------------EEEEEccCC
Confidence 8776665422 22777765 33332 46666632
Q ss_pred CCeEEE--EEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC---cEEEEeccccCCCCC
Q psy5792 159 GYDIMG--IKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG---RENIIEYVETGDPTP 233 (377)
Q Consensus 159 ~~~I~~--~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~---~~~i~~~~~~~~~~~ 233 (377)
...+.. ++... . ..+++.+. ..+ .+..++.|++....+++..++++... .+.+.... ... .-
T Consensus 146 ~~~v~V~~iD~~t--v----~~i~v~~~---~~~--~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-~~i-~v 212 (368)
T 1mda_H 146 SAAAGLSVPGASD--D----QLTKSASC---FHI--HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT-GAQ-NC 212 (368)
T ss_dssp SCEEEEEETTTEE--E----EEEECSSC---CCC--EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC-TTS-CB
T ss_pred CCeEEEEEEchhh--c----eEEECCCc---eEE--ccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee-eee-eC
Confidence 223555 44322 1 11222211 111 23356678877777888778776411 11110000 000 01
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC---------CCCCcee---EEEcCCCCeEEEEec---C
Q psy5792 234 VDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG---------GVDQPSA---LAVDPESGYLFWSES---G 298 (377)
Q Consensus 234 ~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~---------~~~~P~~---iavdp~~g~lywtd~---g 298 (377)
-..|. + .+..+.+||+.. +++.++++.+...+++-.- ....|.+ ++++|..+++|++.. +
T Consensus 213 g~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~ 287 (368)
T 1mda_H 213 SSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSR 287 (368)
T ss_dssp CSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSS
T ss_pred CCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccC
Confidence 12465 4 556788888887 8999999987543332211 1234666 999999999999865 2
Q ss_pred C----CCeEEEEecCCCCe-EEEEecCCCCceEEEEeCCCCEEEEEEeCC-CCeEEEEEccC
Q psy5792 299 K----IPLIARAGLDGKKQ-TILAQEIIMPIKDITLDRKNKRVYWCYSVG-SNVLESMDYSG 354 (377)
Q Consensus 299 ~----~~~I~r~~ldG~~~-~~l~~~~~~~P~glalD~~~~~LYw~d~~~-~~~i~~~~~~G 354 (377)
. ...+..+++.-... ..+... ..|.||++...+++||++.. . .+.|..+|...
T Consensus 288 ~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~-~~~~~VsVID~~t 346 (368)
T 1mda_H 288 SCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANS-AGTEVLDIYDAAS 346 (368)
T ss_dssp CTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEE-TTTTEEEEEESSS
T ss_pred cccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEcc-CCCCeEEEEECCC
Confidence 0 12444666654322 222221 36999999987778998887 5 89999999884
No 123
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.85 E-value=2.1e-07 Score=88.00 Aligned_cols=159 Identities=6% Similarity=0.008 Sum_probs=105.2
Q ss_pred eEEEEEECCCCEEEEEE------------cCCCcEEEEEcCCC--CcEEEEeccccC-CCCCCCCcceEEEecc---CCe
Q psy5792 187 AAKVDFHAAEDYIYWVD------------IDHGTISRTHRDGT--GRENIIEYVETG-DPTPVDQFTDIAVDWI---AQN 248 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd------------~~~~~I~~~~~~G~--~~~~i~~~~~~~-~~~~~~~p~~iavD~~---~~~ 248 (377)
+..+++++ ++.+|.+. ...|+|++++++.. ..+.+.. .+. .....-+|.||.+... +.+
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~--~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEI--IGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEE--ECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEc--cCCCCCcCceeeeeeEEEECCCCcEE
Confidence 44555555 56777765 24678999888732 2223222 000 0011237999999642 337
Q ss_pred EEEEcCC--CCEEEEEEc--CCCeEEEEee----CCCCCceeEEEcCCCCeEEEEecC----------------CCCeEE
Q psy5792 249 IYWSDPK--ENVIEVARL--TGQYRYVLIS----GGVDQPSALAVDPESGYLFWSESG----------------KIPLIA 304 (377)
Q Consensus 249 lYwtd~~--~~~I~~~~~--~g~~~~~l~~----~~~~~P~~iavdp~~g~lywtd~g----------------~~~~I~ 304 (377)
||++|+. ..+|+++++ ++... +++. ..+..|+.+++|+ .|.+|+++.. ..++|+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~-~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSL-LHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEE-EEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEE-EEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 9999987 456666554 44443 3332 2478899999997 6888777631 135788
Q ss_pred EEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 305 RAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 305 r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
|.+.+ ..+.+.. ++..||||++++.++.||++|. ..++|.+.++++
T Consensus 207 r~d~~--~~~~~~~-~l~~pNGia~spDg~~lYvadt-~~~~I~~~~~~~ 252 (355)
T 3sre_A 207 YYSPN--DVRVVAE-GFDFANGINISPDGKYVYIAEL-LAHKIHVYEKHA 252 (355)
T ss_dssp EECTT--CCEEEEE-EESSEEEEEECTTSSEEEEEEG-GGTEEEEEEECT
T ss_pred EEECC--eEEEeec-CCcccCcceECCCCCEEEEEeC-CCCeEEEEEECC
Confidence 88763 4445554 4899999999998899999999 999999999874
No 124
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.77 E-value=2.3e-06 Score=83.86 Aligned_cols=155 Identities=15% Similarity=0.020 Sum_probs=94.1
Q ss_pred eEEEEEECCCCEEEEEEc-----------------CCCcEEEEEcCCCC-------------------cEEEEeccccCC
Q psy5792 187 AAKVDFHAAEDYIYWVDI-----------------DHGTISRTHRDGTG-------------------RENIIEYVETGD 230 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~-----------------~~~~I~~~~~~G~~-------------------~~~i~~~~~~~~ 230 (377)
...|+|++ +++||++-- ..++|.|++++|+. +..+..
T Consensus 141 g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a------ 213 (463)
T 2wg3_C 141 GGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA------ 213 (463)
T ss_dssp EEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE------
T ss_pred CCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE------
Confidence 55677777 568888732 13689999999841 123444
Q ss_pred CCCCCCcceEEEeccCC------eEEEEcC-CC----CEEEEEEcCCCe---EEEEeeCC--CCCceeEEEcC------C
Q psy5792 231 PTPVDQFTDIAVDWIAQ------NIYWSDP-KE----NVIEVARLTGQY---RYVLISGG--VDQPSALAVDP------E 288 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~------~lYwtd~-~~----~~I~~~~~~g~~---~~~l~~~~--~~~P~~iavdp------~ 288 (377)
.++.+|.+|++|+.++ .+|.+|. .. ..|..+...+.+ ..++.... ...|.|+++-. .
T Consensus 214 -~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~ 292 (463)
T 2wg3_C 214 -HGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERL 292 (463)
T ss_dssp -ECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTT
T ss_pred -ECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhh
Confidence 4788899999998754 5777885 21 245444322211 11111111 14688888842 3
Q ss_pred CCeEEEEecCCCCeEEEEecCCCC---eEEEE-e--------cCCCCceEEEEeCCCCEEEEEEeC------CCCeEEEE
Q psy5792 289 SGYLFWSESGKIPLIARAGLDGKK---QTILA-Q--------EIIMPIKDITLDRKNKRVYWCYSV------GSNVLESM 350 (377)
Q Consensus 289 ~g~lywtd~g~~~~I~r~~ldG~~---~~~l~-~--------~~~~~P~glalD~~~~~LYw~d~~------~~~~i~~~ 350 (377)
.|.+|++++. .+|.++.+++.. ....+ . .....|.++++++ .+.||+++.. ..++|+++
T Consensus 293 ~g~~f~~~~~--g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~p-dG~Lyv~~~~~~~~~~~~G~I~Ri 369 (463)
T 2wg3_C 293 YGSYVFGDRN--GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDE-LGEVYILSSSKSMTQTHNGKLYKI 369 (463)
T ss_dssp TTCEEEEETT--SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECT-TCCEEEEEESSCGGGCSSEEEEEE
T ss_pred cceEEEecCC--CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECC-CCCEEEEeccCCcccCCCCcEEEe
Confidence 4669999985 689999887542 22232 1 1135799999985 6899999971 25788888
Q ss_pred Ec
Q psy5792 351 DY 352 (377)
Q Consensus 351 ~~ 352 (377)
..
T Consensus 370 ~~ 371 (463)
T 2wg3_C 370 VD 371 (463)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.76 E-value=1.8e-05 Score=76.16 Aligned_cols=223 Identities=11% Similarity=0.100 Sum_probs=145.1
Q ss_pred CcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCC--CceEEEc-CCCCceEEEecCCC-ceeEEeeecCC
Q psy5792 38 HSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDAND--GNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNS 110 (377)
Q Consensus 38 ~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~--~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~ 110 (377)
+.|...|++|. .+++. ........+++ .+.+|+++.... ..|+..+ .+|+... +..... +..+.+ +|+.
T Consensus 159 ~~i~i~d~~g~~~~~l~--~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~~~~~~~~~~~-spdg 234 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVH--RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAF-SPDG 234 (415)
T ss_dssp EEEEEEETTSCSCEEEE--EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSSCEEEEEE-CTTS
T ss_pred ceEEEEcCCCCCCEEEe--CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eecCCCcccCEEE-cCCC
Confidence 68999999998 77775 34456778888 556788876543 5788888 5555443 332222 333332 3332
Q ss_pred CCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCC--CeEEEEEcCCCCceeeEEEEecCCCCceE
Q psy5792 111 GYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSG--YDIMGIKYNKNESKVTQVLGPLSKVSLAA 188 (377)
Q Consensus 111 ~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~~~~~ 188 (377)
+ .|+++.... ..|..+++..... ..+ ........
T Consensus 235 ~---------------------------------------~la~~~~~~g~~~i~~~d~~~~~~---~~l--~~~~~~~~ 270 (415)
T 2hqs_A 235 S---------------------------------------KLAFALSKTGSLNLYVMDLASGQI---RQV--TDGRSNNT 270 (415)
T ss_dssp S---------------------------------------EEEEEECTTSSCEEEEEETTTCCE---EEC--CCCSSCEE
T ss_pred C---------------------------------------EEEEEEecCCCceEEEEECCCCCE---EeC--cCCCCccc
Confidence 2 455554322 2488888876533 111 12234577
Q ss_pred EEEEECCCCEEEEEEcCCC--cEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC--CCEEEEEEc
Q psy5792 189 KVDFHAAEDYIYWVDIDHG--TISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK--ENVIEVARL 264 (377)
Q Consensus 189 ~l~~d~~~~~ly~sd~~~~--~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~--~~~I~~~~~ 264 (377)
.+++.+.+..|+++....+ +|+.+++++...+.+.. ....+..+++.+.++.|+++... ...|.+.++
T Consensus 271 ~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~--------~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 271 EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW--------EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC--------SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred ceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec--------CCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 8899988888888764333 89999998765444332 22346678898888888887654 458999999
Q ss_pred CCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecC-CCCeEEEEecCCCCeEEEEe
Q psy5792 265 TGQYRYVLISGGVDQPSALAVDPESGYLFWSESG-KIPLIARAGLDGKKQTILAQ 318 (377)
Q Consensus 265 ~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g-~~~~I~r~~ldG~~~~~l~~ 318 (377)
++...+.+... .....+++.|....|+++... ....|+..+++|...+.+..
T Consensus 343 ~~~~~~~l~~~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 343 ATGGVQVLSST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp TTCCEEECCCS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred CCCCEEEecCC--CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 88776555433 378899999988878877642 12389999999877666543
No 126
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.76 E-value=7.8e-06 Score=84.30 Aligned_cols=288 Identities=14% Similarity=0.144 Sum_probs=171.1
Q ss_pred CcCCccccccCCCCeEEEEeCCCC-----cEEEEEcCCc-EEEEEeCCCC-----------------------CceEEEE
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSH-----SLHYVNIEVK-VAKVVSMPDA-----------------------AQVVAAV 65 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~-----~I~~~~~dG~-~~~i~~~~~~-----------------------~~p~~la 65 (377)
...+..+++.+++++|+++....+ .|...++++. .+.+...... ....+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456889999999999988876444 8999999888 6666521111 1135566
Q ss_pred E--ECCeEEEEcCCCCceEEEcCCCC---ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCcccc
Q psy5792 66 F--YKGRIIYSDANDGNIRSINLDGS---NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLA 139 (377)
Q Consensus 66 v--~~~~ly~td~~~~~I~~~~~~g~---~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~ 139 (377)
+ .+.+|+++.. +.|+.++.++. ....+..... +..+.+ +|+.
T Consensus 116 ~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~-SPDG----------------------------- 163 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKL-SPKG----------------------------- 163 (741)
T ss_dssp ECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEE-CTTS-----------------------------
T ss_pred ECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccC-CCCC-----------------------------
Confidence 7 4556777765 77888884332 3222222112 333332 3332
Q ss_pred CCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCC----------------ceEEEEEECCCCEEEEEE
Q psy5792 140 AKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVS----------------LAAKVDFHAAEDYIYWVD 203 (377)
Q Consensus 140 ~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~----------------~~~~l~~d~~~~~ly~sd 203 (377)
..|+++.... |+.+++++... ..+. ..... .+.++++.+.+.+|+++.
T Consensus 164 ----------~~la~~~~~~--i~~~d~~~g~~---~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 164 ----------GFVSFIRGRN--LWVIDLASGRQ---MQLT-ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp ----------SEEEEEETTE--EEEEETTTTEE---EECC-CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred ----------CEEEEEeCCc--EEEEecCCCCE---EEec-cCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 2466666554 88888876532 1111 11111 136688888888888875
Q ss_pred cCCC--------------------------------cEEEEEcCC-CCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 204 IDHG--------------------------------TISRTHRDG-TGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 204 ~~~~--------------------------------~I~~~~~~G-~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
...+ .|+.+++++ .....+... ...-..+..+++ +.++.|+
T Consensus 228 ~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~-pDg~~l~ 301 (741)
T 2ecf_A 228 IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLG-----KEQDIYLARVNW-RDPQHLS 301 (741)
T ss_dssp EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCC-----SCSSEEEEEEEE-EETTEEE
T ss_pred EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCC-----CCcceEEEEEEe-CCCCEEE
Confidence 4321 666677765 444333220 001123667888 8788888
Q ss_pred EEcC----CCCEEEEEEcCCCeEEEEeeCCCC----CceeEEEcCCCCeEEEEe-cCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 251 WSDP----KENVIEVARLTGQYRYVLISGGVD----QPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKKQTILAQEII 321 (377)
Q Consensus 251 wtd~----~~~~I~~~~~~g~~~~~l~~~~~~----~P~~iavdp~~g~lywtd-~g~~~~I~r~~ldG~~~~~l~~~~~ 321 (377)
++.. ...+|.+.++++.....+...... ....+++.|.+. ++++. .....+|++.+++|. .+.+....
T Consensus 302 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~- 378 (741)
T 2ecf_A 302 FQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGN- 378 (741)
T ss_dssp EEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSS-
T ss_pred EEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecc-
Confidence 7643 235799999987665555443111 335789998655 55553 322468999998887 55544332
Q ss_pred CCceEE-EEeCCCCEEEEEEeCC----CCeEEEEEccCCceEEE
Q psy5792 322 MPIKDI-TLDRKNKRVYWCYSVG----SNVLESMDYSGGSKMQL 360 (377)
Q Consensus 322 ~~P~gl-alD~~~~~LYw~d~~~----~~~i~~~~~~G~~~~~~ 360 (377)
.....+ ++++.+++||++.. . ...|+.++.+|...+.+
T Consensus 379 ~~v~~~~~~s~dg~~l~~~~~-~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 379 WSVDELLAVDEKAGLAYFRAG-IESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp SCEEEEEEEETTTTEEEEEEC-SSCTTCBEEEEEETTCCCCEEC
T ss_pred eEEEeEeEEeCCCCEEEEEEe-CCCCceEEEEEEEcCCCCeeec
Confidence 234455 58888888988765 4 34688888876544433
No 127
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.72 E-value=8.2e-06 Score=77.47 Aligned_cols=207 Identities=8% Similarity=0.029 Sum_probs=140.5
Q ss_pred CCcCCccccccCCCCeEEEEeCCC---------------CcEEEEEcCC---c-EEEEEeC----CCCCceEEEEEE---
Q psy5792 14 SFGAVASTLKPQSGPFVYGVKTLS---------------HSLHYVNIEV---K-VAKVVSM----PDAAQVVAAVFY--- 67 (377)
Q Consensus 14 ~~~~~~~~~~d~~~~~ly~~d~~~---------------~~I~~~~~dG---~-~~~i~~~----~~~~~p~~lav~--- 67 (377)
.|..+-++.+|. .+||+++|++. -+|..+|+.. + ++++.-. ........|+|.
T Consensus 85 ~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred ceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEeccc
Confidence 377888999997 57999999872 1577888854 5 5555411 123456778886
Q ss_pred ------CCeEEEEcCCCCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccC
Q psy5792 68 ------KGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAA 140 (377)
Q Consensus 68 ------~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~ 140 (377)
+.++|+||.....|.+++ .+|+..++++....| +..
T Consensus 164 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p--------d~~----------------------------- 206 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA--------ERP----------------------------- 206 (381)
T ss_dssp TTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC--------CSC-----------------------------
T ss_pred CCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc--------ccC-----------------------------
Confidence 578999999999999999 778777776432112 100
Q ss_pred CcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECC----CCEEEEEEcCCCcEEEEEcC-
Q psy5792 141 KVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAA----EDYIYWVDIDHGTISRTHRD- 215 (377)
Q Consensus 141 G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~----~~~ly~sd~~~~~I~~~~~~- 215 (377)
..+ .++|... .+ ...+.+|++.+. ++.|||.-..+.+++++...
T Consensus 207 ----------~~~------------~i~G~~~-----~~----~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~ 255 (381)
T 3q6k_A 207 ----------TKF------------DYGGKEY-----EF----KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKE 255 (381)
T ss_dssp ----------EEE------------EETTEEE-----EE----CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHH
T ss_pred ----------cce------------EECCEEe-----Ee----ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHH
Confidence 111 1111100 00 124677777776 78999999988899999842
Q ss_pred ---CC---CcEEEEeccccCCCCC-CCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC-C----eEEEEee-CCCCCcee
Q psy5792 216 ---GT---GRENIIEYVETGDPTP-VDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG-Q----YRYVLIS-GGVDQPSA 282 (377)
Q Consensus 216 ---G~---~~~~i~~~~~~~~~~~-~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g-~----~~~~l~~-~~~~~P~~ 282 (377)
.+ ..+.+.. .+ ..+..++++|..+|+||+++-..+.|.+-+.++ . ...++.. ..+..|.+
T Consensus 256 L~~~~~~~~v~~~G~-------kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~ 328 (381)
T 3q6k_A 256 LKQKGGKLNPELLGN-------RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTD 328 (381)
T ss_dssp HSSTTCCCCCEEEEE-------CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEE
T ss_pred hhCcchhhceEEeee-------cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCe
Confidence 21 2233332 22 234557899877899999999999999999998 3 3455554 35788999
Q ss_pred EEEcCCCCeEEEEec
Q psy5792 283 LAVDPESGYLFWSES 297 (377)
Q Consensus 283 iavdp~~g~lywtd~ 297 (377)
+++|. +|+||+...
T Consensus 329 ~~i~~-~g~Lwv~sn 342 (381)
T 3q6k_A 329 ISVDS-KGGLWFMSN 342 (381)
T ss_dssp EEECT-TSCEEEEEC
T ss_pred EEECC-CCeEEEEEC
Confidence 99996 789999863
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.70 E-value=2.3e-05 Score=69.99 Aligned_cols=247 Identities=11% Similarity=0.032 Sum_probs=150.1
Q ss_pred CCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEcC-C-CCceEEEecCC-C-ceeEEeeec
Q psy5792 36 LSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSINL-D-GSNSTVLRNNA-G-ISDFILFSV 108 (377)
Q Consensus 36 ~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~~-~-g~~~~~~~~~~-~-p~~i~v~~~ 108 (377)
..+.|...++++. .+.+. .....+.++++ .+.+|+++. .+.|...+. + ++...+..... . +..+.+ ++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-sp 94 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI-SP 94 (297)
T ss_dssp CCEEEEEEETTTTEEEEEE--EESSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE-CT
T ss_pred cceeEEEEeCCCCceeeec--cCCcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEE-CC
Confidence 4567888888777 66555 33445777888 455666664 567888884 4 43333221110 1 222221 11
Q ss_pred CCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC---CCeEEEEEcCCCCceeeEEEEecCCCC
Q psy5792 109 NSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS---GYDIMGIKYNKNESKVTQVLGPLSKVS 185 (377)
Q Consensus 109 ~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~---~~~I~~~~l~~~~~~~~~~~~~~~~~~ 185 (377)
+ ...++++... ...|..+++++... ..+....
T Consensus 95 d---------------------------------------g~~l~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~ 129 (297)
T 2ojh_A 95 D---------------------------------------GALYAISDKVEFGKSAIYLLPSTGGTP------RLMTKNL 129 (297)
T ss_dssp T---------------------------------------SSEEEEEECTTTSSCEEEEEETTCCCC------EECCSSS
T ss_pred C---------------------------------------CCEEEEEEeCCCCcceEEEEECCCCce------EEeecCC
Confidence 1 1245555521 23577777766533 1223334
Q ss_pred ceEEEEEECCCCEEEEEEcCCC--cEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcC--CCCEEEE
Q psy5792 186 LAAKVDFHAAEDYIYWVDIDHG--TISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDP--KENVIEV 261 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~sd~~~~--~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~--~~~~I~~ 261 (377)
.+..+++.+.+..|+++....+ .|+.+++++.....+. .....+..+++.+.++.|+++.. ...+|+.
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT--------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWR 201 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC--------CSSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc--------cCCCccccceECCCCCEEEEEecCCCCccEEE
Confidence 4778889888888887665555 6667777654443332 23345788999887777887753 3457888
Q ss_pred EEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCC---------CCeEEEEecCCCCeEEEEe--cCCCCceEEEEe
Q psy5792 262 ARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK---------IPLIARAGLDGKKQTILAQ--EIIMPIKDITLD 330 (377)
Q Consensus 262 ~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~---------~~~I~r~~ldG~~~~~l~~--~~~~~P~glalD 330 (377)
.++++.....+.. .......++++|...+|+++.... ...|+..++++...+.+.. ..-..+..+++.
T Consensus 202 ~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 280 (297)
T 2ojh_A 202 VRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWS 280 (297)
T ss_dssp EETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBC
T ss_pred ECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceEC
Confidence 8877766555543 234567899999888888875421 2568899998776555543 212345667787
Q ss_pred CCCCEEEEEEe
Q psy5792 331 RKNKRVYWCYS 341 (377)
Q Consensus 331 ~~~~~LYw~d~ 341 (377)
+.+.+|+++..
T Consensus 281 pdg~~l~~~~~ 291 (297)
T 2ojh_A 281 PDGDEFAYVRY 291 (297)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 77788888765
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.69 E-value=2.9e-05 Score=74.79 Aligned_cols=193 Identities=11% Similarity=0.047 Sum_probs=131.3
Q ss_pred EEEEEeCCC--CeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC--CcEEEEEcCCCCcEEEEecc
Q psy5792 151 FILFSVNSG--YDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH--GTISRTHRDGTGRENIIEYV 226 (377)
Q Consensus 151 ~l~~s~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~--~~I~~~~~~G~~~~~i~~~~ 226 (377)
.|+++..+. ..|+..++..... ..+. .....+.++++.+.+..|+++.... ..|+.+++++.....+..
T Consensus 192 ~la~~s~~~~~~~i~~~d~~tg~~---~~l~--~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-- 264 (415)
T 2hqs_A 192 KLAYVTFESGRSALVIQTLANGAV---RQVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-- 264 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE---EEEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC--
T ss_pred EEEEEEecCCCcEEEEEECCCCcE---EEee--cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC--
Confidence 355554331 2488888876543 1222 2234578899999888899876543 469999998655433332
Q ss_pred ccCCCCCCCCcceEEEeccCCeEEEEcCC--CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCC-CCeE
Q psy5792 227 ETGDPTPVDQFTDIAVDWIAQNIYWSDPK--ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK-IPLI 303 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~~~lYwtd~~--~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~-~~~I 303 (377)
.-.....+++.+.++.|+++... ..+|++.++++...+.+.. .......+++.|...+|+++.... ...|
T Consensus 265 ------~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 265 ------GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp ------CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred ------CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec-CCCcccCeEECCCCCEEEEEECcCCceEE
Confidence 23457788888877778877543 3489999998876544433 234567899999888898887531 3689
Q ss_pred EEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCC--eEEEEEccCCceEEE
Q psy5792 304 ARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSN--VLESMDYSGGSKMQL 360 (377)
Q Consensus 304 ~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~--~i~~~~~~G~~~~~~ 360 (377)
+..++++...+.+... .....+++.+.+..|+++.. ..+ .|+.++++|+..+++
T Consensus 338 ~~~d~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~s~-~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 338 AKQDLATGGVQVLSST--FLDETPSLAPNGTMVIYSSS-QGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEEETTTCCEEECCCS--SSCEEEEECTTSSEEEEEEE-ETTEEEEEEEETTSCCEEEC
T ss_pred EEEECCCCCEEEecCC--CCcCCeEEcCCCCEEEEEEc-CCCccEEEEEECCCCcEEEe
Confidence 9999987766554433 36788999888888888776 544 899999998766555
No 130
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.68 E-value=2e-05 Score=73.76 Aligned_cols=192 Identities=14% Similarity=0.135 Sum_probs=122.7
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCC-------EEEEEEcC--CCcEEEEEcCCCCcEEE
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAED-------YIYWVDID--HGTISRTHRDGTGRENI 222 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~-------~ly~sd~~--~~~I~~~~~~G~~~~~i 222 (377)
++++....+-+..++++|... +. +. ..++.++++-+.-. .+|.++.. .++|..+.++....+ +
T Consensus 42 ~ii~t~k~~gL~Vydl~G~~l---~~---~~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDGKML---HS---YN-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp EEEEEETTTEEEEEETTSCEE---EE---EC-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred EEEEEcCCCCEEEEcCCCcEE---EE---cc-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 344443334599999987744 22 22 25677777665221 56889988 888888877632221 2
Q ss_pred EeccccCCC--CCCCCcceEEE--eccCC--eEEEEcCCCCEEEEEEc----CCCeEEEEeeC--CCCCceeEEEcCCCC
Q psy5792 223 IEYVETGDP--TPVDQFTDIAV--DWIAQ--NIYWSDPKENVIEVARL----TGQYRYVLISG--GVDQPSALAVDPESG 290 (377)
Q Consensus 223 ~~~~~~~~~--~~~~~p~~iav--D~~~~--~lYwtd~~~~~I~~~~~----~g~~~~~l~~~--~~~~P~~iavdp~~g 290 (377)
........+ ..+..|+||++ ++.++ .+|+++.. +++....+ +|.....++.. --.+|.++++|+..|
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCC
Confidence 110000001 44578999999 87666 47777776 78877555 23232233321 235799999999999
Q ss_pred eEEEEecCCCCeEEEEecCCCC---eEEEEe---cCCC-CceEEEEeCCC---CEEEEEEeCCCCeEEEEEccCC
Q psy5792 291 YLFWSESGKIPLIARAGLDGKK---QTILAQ---EIIM-PIKDITLDRKN---KRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 291 ~lywtd~g~~~~I~r~~ldG~~---~~~l~~---~~~~-~P~glalD~~~---~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
+||++++. ..|++.+.+... .+.+.. ..+. .|-||+|.+.. ++|+.++. +.++...++..+.
T Consensus 193 ~Lyv~eEd--~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ-G~~s~~Vydr~~~ 264 (355)
T 3amr_A 193 RLYIAEED--EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ-GNSSYAIYDRQGK 264 (355)
T ss_dssp EEEEEETT--TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG-GGTEEEEEESSTT
T ss_pred eEEEeccc--ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC-CCCEEEEEECCCC
Confidence 99999974 569999966332 333322 1233 79999997543 58999999 8888888888754
No 131
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.67 E-value=0.00038 Score=69.05 Aligned_cols=278 Identities=13% Similarity=0.123 Sum_probs=174.4
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVL 94 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~ 94 (377)
.+.++++.+++..|... ...+.|...+.++. .+.+. .....+.++++ .++....+-..++.|...+.+++....+
T Consensus 223 ~v~~~~~s~dg~~l~~~-~~d~~i~~w~~~~~~~~~~~--~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~ 299 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLT--GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTL 299 (577)
T ss_dssp CEEEEEECTTSSCEEEE-ETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE
T ss_pred CEEEEEECCCCCEEEEE-eCCCEEEEEeCCCCEEEEEe--cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEE
Confidence 56778888877666544 45677888899888 77664 45556788888 3445555555567777777777666555
Q ss_pred ecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCce
Q psy5792 95 RNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESK 173 (377)
Q Consensus 95 ~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~ 173 (377)
..... +.++++ +++.+ .+++....+.|+..++++...
T Consensus 300 ~~h~~~v~~~~~-~~~~~----------------------------------------~l~t~~~d~~i~~w~~~~~~~- 337 (577)
T 2ymu_A 300 TGHSSSVWGVAF-SPDGQ----------------------------------------TIASASDDKTVKLWNRNGQHL- 337 (577)
T ss_dssp CCCSSCEEEEEE-CTTSS----------------------------------------EEEEEETTSCEEEEETTSCEE-
T ss_pred ecCCCCeEEEEE-CCCCC----------------------------------------EEEEEeCCCeEEEEeCCCCee-
Confidence 43333 445543 33222 333333334577777765422
Q ss_pred eeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEc
Q psy5792 174 VTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd 253 (377)
.........+.++++.+.+..|.... ..+.|...+.++.....+.. .-..+.++++.+.+..|. +-
T Consensus 338 ----~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~v~~~~~~~~~~~~~~~--------~~~~v~~~~~s~dg~~l~-~~ 403 (577)
T 2ymu_A 338 ----QTLTGHSSSVWGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTG--------HSSSVRGVAFSPDGQTIA-SA 403 (577)
T ss_dssp ----EEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTCCEEEEEEC--------CSSCEEEEEECTTSSCEE-EE
T ss_pred ----EEEeCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEcCCCCEEEEecC--------CCCCeEEEEECCCCCEEE-EE
Confidence 11112334578899998777766554 56788888887654444432 344688999997655554 44
Q ss_pred CCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCC
Q psy5792 254 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKN 333 (377)
Q Consensus 254 ~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~ 333 (377)
...+.|.+.+.+++....+.. .-....++++.|.+.+|..+.. ...|...++++.....+... -.....+++.+.+
T Consensus 404 ~~d~~v~~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~--d~~v~~w~~~~~~~~~~~~~-~~~v~~~~~spd~ 479 (577)
T 2ymu_A 404 SDDKTVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDDQTIASASD--DKTVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDG 479 (577)
T ss_dssp ETTSEEEEECTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTSCEEEEEECC-SSCEEEEEECTTS
T ss_pred eCCCEEEEEeCCCCEEEEecC-CCCCeEEEEECCCCCEEEEEcC--CCEEEEEECCCCEEEEEcCC-CCCEEEEEEcCCC
Confidence 455789998988877666544 3455789999997777666553 46777778877665555443 3556788987655
Q ss_pred CEEEEEEeCCCCeEEEEEccCCceEE
Q psy5792 334 KRVYWCYSVGSNVLESMDYSGGSKMQ 359 (377)
Q Consensus 334 ~~LYw~d~~~~~~i~~~~~~G~~~~~ 359 (377)
..|. +-. ..+.|...+.+|.-.++
T Consensus 480 ~~la-s~~-~d~~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 480 QTIA-SAS-DDKTVKLWNRNGQLLQT 503 (577)
T ss_dssp CEEE-EEE-TTSEEEEEETTSCEEEE
T ss_pred CEEE-EEe-CCCEEEEEcCCCCEEEE
Confidence 5444 444 46677777776543333
No 132
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.65 E-value=6.8e-05 Score=71.13 Aligned_cols=158 Identities=13% Similarity=0.159 Sum_probs=107.3
Q ss_pred CceEEEEEE-C------CCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC------CC-----CCCcceEEEecc-
Q psy5792 185 SLAAKVDFH-A------AEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP------TP-----VDQFTDIAVDWI- 245 (377)
Q Consensus 185 ~~~~~l~~d-~------~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~------~~-----~~~p~~iavD~~- 245 (377)
+....+.+| . .++++|++|.....|.++++.......+....-.... .+ .....|||+.+.
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 446677777 2 1679999998888888888864332222211000000 01 135889999987
Q ss_pred ---CCeEEEEcCCCCEEEEEEc---C-C---CeEEEEeeCC-CCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC----
Q psy5792 246 ---AQNIYWSDPKENVIEVARL---T-G---QYRYVLISGG-VDQPSALAVDPESGYLFWSESGKIPLIARAGLDG---- 310 (377)
Q Consensus 246 ---~~~lYwtd~~~~~I~~~~~---~-g---~~~~~l~~~~-~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG---- 310 (377)
.+.|||.--...++++... . . ...+.+.+.+ ..+..++++|+.+|.||+++.. ...|.+.+.++
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~-~~aI~~w~~~~~~~~ 310 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN-TKQVSCWNTQKMPLR 310 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS-SSEEEEEETTSCSBC
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc-CCeEEEEeCCCCccc
Confidence 7899999988888888873 2 1 1223333322 2345578998779999999985 78999999887
Q ss_pred -CCeEEEEec-CCCCceEEEEeCCCCEEEEEEeCCCC
Q psy5792 311 -KKQTILAQE-IIMPIKDITLDRKNKRVYWCYSVGSN 345 (377)
Q Consensus 311 -~~~~~l~~~-~~~~P~glalD~~~~~LYw~d~~~~~ 345 (377)
.+..++++. .+.+|.++++|. ++.||+... ...
T Consensus 311 ~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn-~l~ 345 (381)
T 3q6k_A 311 MKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSN-GFP 345 (381)
T ss_dssp GGGEEEEEECTTCCSEEEEEECT-TSCEEEEEC-SCC
T ss_pred cCceEEEEECCCccccCeEEECC-CCeEEEEEC-cch
Confidence 355666665 488999999984 678999887 543
No 133
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.63 E-value=3.3e-05 Score=72.65 Aligned_cols=295 Identities=9% Similarity=0.044 Sum_probs=160.9
Q ss_pred ccccCCCCeEEEEeCCCC--cEEEEEcCCc-EEEEEeCCCCCce-EEEEE--ECCeEEEEcCCCCceEEEc-CCCCceEE
Q psy5792 21 TLKPQSGPFVYGVKTLSH--SLHYVNIEVK-VAKVVSMPDAAQV-VAAVF--YKGRIIYSDANDGNIRSIN-LDGSNSTV 93 (377)
Q Consensus 21 ~~~d~~~~~ly~~d~~~~--~I~~~~~dG~-~~~i~~~~~~~~p-~~lav--~~~~ly~td~~~~~I~~~~-~~g~~~~~ 93 (377)
.++.+++++|+++....+ .|..+++++. .+.+. .....+ .++++ .+.+|+++.. ...|+.++ .+|+...+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt--~~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT--EGRGDNTFGGFLSPDDDALFYVKD-GRNLMRVDLATLEENVV 117 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC--CSSCBCSSSCEECTTSSEEEEEET-TTEEEEEETTTCCEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee--eCCCCCccceEEcCCCCEEEEEeC-CCeEEEEECCCCcceee
Confidence 678888888888776444 6999999988 77664 222222 24456 5667888874 35788888 55554444
Q ss_pred EecCCC-c-eeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccc-----cCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 94 LRNNAG-I-SDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSL-----AAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 94 ~~~~~~-p-~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~-----~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
...... . .+..+.+++... -.+........ ..+|.. .+.......|..++
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~---------------l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTK---------------LVGIEIRREDWVPLTDWKKFHE--------FYFTKPCCRLMRVD 174 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSE---------------EEEEEEEGGGCCCCCSHHHHHH--------HGGGCCCEEEEEEE
T ss_pred eechhhcccccceeECCCCCe---------------eccccccCcccccccccchhhh--------hhccCCcceEEEEE
Confidence 432222 1 111122222110 00000000000 000000 00000112377777
Q ss_pred cCCCCceeeEEEEecCCCCceEEEEEEC-CCCEEEEEEcC-----CCcEEEEEcCCCCcEEEEeccccCCCCCC-CCcce
Q psy5792 167 YNKNESKVTQVLGPLSKVSLAAKVDFHA-AEDYIYWVDID-----HGTISRTHRDGTGRENIIEYVETGDPTPV-DQFTD 239 (377)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~l~~d~-~~~~ly~sd~~-----~~~I~~~~~~G~~~~~i~~~~~~~~~~~~-~~p~~ 239 (377)
+.+... ..+.. .......+++.+ .++.|.++... ...|+.++.+|...+.+.. ... .....
T Consensus 175 ~~~g~~---~~l~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-------~~~~~~~~~ 242 (388)
T 3pe7_A 175 LKTGES---TVILQ--ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT-------HAEGESCTH 242 (388)
T ss_dssp TTTCCE---EEEEE--ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC-------CCTTEEEEE
T ss_pred CCCCce---EEeec--CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee-------CCCCccccc
Confidence 765533 22221 223466788888 67778776543 3489999998876555543 111 12445
Q ss_pred EEEeccCCeEEEE-cCCCC---EEEEEEcCCCeEEEEeeCCC-----CCceeEEEcCCCCeEEEEec-------CCCCeE
Q psy5792 240 IAVDWIAQNIYWS-DPKEN---VIEVARLTGQYRYVLISGGV-----DQPSALAVDPESGYLFWSES-------GKIPLI 303 (377)
Q Consensus 240 iavD~~~~~lYwt-d~~~~---~I~~~~~~g~~~~~l~~~~~-----~~P~~iavdp~~g~lywtd~-------g~~~~I 303 (377)
.++.+.++.|+++ +.... .|++.++++...+.+..... ..|.++++.|...+|+++-. .....|
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 6777767777554 33222 49999998776555543211 12555677777777777531 235789
Q ss_pred EEEecCCCCeEEEEecCCC----------CceEEEEeCCCCEEEEEEeC-CCCeEEEEEcc
Q psy5792 304 ARAGLDGKKQTILAQEIIM----------PIKDITLDRKNKRVYWCYSV-GSNVLESMDYS 353 (377)
Q Consensus 304 ~r~~ldG~~~~~l~~~~~~----------~P~glalD~~~~~LYw~d~~-~~~~i~~~~~~ 353 (377)
+..++++...+.+...... ....+++.+.+++|+++... +...|+.+++.
T Consensus 323 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 323 YVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred EEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 9999998776666654210 34567888888899988651 33467776665
No 134
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.63 E-value=0.00028 Score=66.44 Aligned_cols=287 Identities=12% Similarity=-0.010 Sum_probs=164.7
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECC-eEEEEcCCCCceEEEc-CCCCceE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKG-RIIYSDANDGNIRSIN-LDGSNST 92 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~-~ly~td~~~~~I~~~~-~~g~~~~ 92 (377)
.+.+++..+.+..|+.. ...+.|...+.+|. ...+. ........+++ .++ .|+.+ ..++.|...+ .+++...
T Consensus 110 ~v~~~~~s~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTG-VENGELRLWNKTGALLNVLN--FHRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQ 185 (425)
T ss_dssp CEEEEEECTTSSEEEEE-ETTSCEEEEETTSCEEEEEC--CCCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEE
T ss_pred ceEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCeeeecc--CCCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEE
Confidence 67888898876666544 45678999998888 77663 45566788888 333 45544 4567788888 5565544
Q ss_pred EEecCCCc-eeEEeeecCCCCcccCCCcCCCCCC--ceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCC
Q psy5792 93 VLRNNAGI-SDFILFSVNSGYDIMGIKYNKNESK--VQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNK 169 (377)
Q Consensus 93 ~~~~~~~p-~~i~v~~~~~~~~~~~~~C~~~~g~--Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~ 169 (377)
.+.....+ ..+.. ......+ ...++. .++..+ ++....+.|+.+++..
T Consensus 186 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~---------------~~~~~~-~~~~~~g~i~~~d~~~ 236 (425)
T 1r5m_A 186 HFELKETGGSSINA-------------ENHSGDGSLGVDVEW---------------VDDDKF-VIPGPKGAIFVYQITE 236 (425)
T ss_dssp EECCC----------------------------CCCBSCCEE---------------EETTEE-EEECGGGCEEEEETTC
T ss_pred EeeccccCccceee-------------ccccCCcceeeEEEE---------------cCCCEE-EEEcCCCeEEEEEcCC
Confidence 44321111 00000 0000000 000000 111233 3333344688888876
Q ss_pred CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeE
Q psy5792 170 NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNI 249 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~l 249 (377)
... ...+ ......+..+++.+.+..|+.+. ..+.|...++.......... ..-..+.++++.+.+ +
T Consensus 237 ~~~--~~~~--~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~--~ 302 (425)
T 1r5m_A 237 KTP--TGKL--IGHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNSQNCFY-------GHSQSIVSASWVGDD--K 302 (425)
T ss_dssp SSC--SEEE--CCCSSCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBSCSEEEC-------CCSSCEEEEEEETTT--E
T ss_pred Cce--eeee--ccCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCccceEec-------CCCccEEEEEECCCC--E
Confidence 533 1111 12344578899998777666555 56788888876543333333 234457888888644 6
Q ss_pred EEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-----------------
Q psy5792 250 YWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK----------------- 312 (377)
Q Consensus 250 Ywtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~----------------- 312 (377)
+++-...+.|.+.++........+......+..++++|...+|+.+.. .+.|...++....
T Consensus 303 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 303 VISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM--DGQVNVYDLKKLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET--TSCEEEEECHHHHC--------------CE
T ss_pred EEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC--CCeEEEEECCCCccceeeeecccccccCcc
Confidence 666667789999999766554444444566899999997666666653 4567766665332
Q ss_pred ---eEEEEecCCC--CceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 313 ---QTILAQEIIM--PIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 313 ---~~~l~~~~~~--~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
....+..... .+..+++.+.+..|+.+. ..+.|...+++|
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~g 425 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY--SLQEGSVVAIPG 425 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE--SSSCCEEEECCC
T ss_pred cchhhhhhcCcccCCceEEEEccCCCceEEEEe--cCceEEEEeecC
Confidence 2222222122 677888876666665554 355666666553
No 135
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.61 E-value=2.2e-05 Score=73.46 Aligned_cols=193 Identities=9% Similarity=0.064 Sum_probs=122.1
Q ss_pred eEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEECC---------eEEEEcCC--CCceEEE--cCCCCceEEE
Q psy5792 29 FVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFYKG---------RIIYSDAN--DGNIRSI--NLDGSNSTVL 94 (377)
Q Consensus 29 ~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~~~---------~ly~td~~--~~~I~~~--~~~g~~~~~~ 94 (377)
.+++.-...+.+..+|++|+ +..+ +. ..+.++++..+ .+|.++.. .++|..+ +.+....+.+
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~---~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSY---NT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEE---CC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEc---cC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 34555555678999999999 7766 33 57888887333 46999988 8888777 4222223333
Q ss_pred e-------cC-CCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 95 R-------NN-AGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 95 ~-------~~-~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
. .. ..|.|+++|..... ..-+++++.. .|.+..+.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~------------------------------------g~~yafV~~k-~G~~~q~~ 159 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKT------------------------------------GKYYAMVTGK-EGEFEQYE 159 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTT------------------------------------CCEEEEEECS-SSEEEEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCC------------------------------------CcEEEEEECC-CCeEEEEE
Confidence 2 22 23888888765321 0013444444 46787766
Q ss_pred cC--CCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcC--CCC-cEEEEeccccCCCCCCC-CcceE
Q psy5792 167 YN--KNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRD--GTG-RENIIEYVETGDPTPVD-QFTDI 240 (377)
Q Consensus 167 l~--~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~--G~~-~~~i~~~~~~~~~~~~~-~p~~i 240 (377)
+. +...-....+-.+...+.+.++.+|...++||+++... .|++++.+ +.. .+.+.. ... ..+. .|+||
T Consensus 160 l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~-~~~---g~l~aDvEGL 234 (355)
T 3amr_A 160 LKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDR-ADG---RHLTRDIEGL 234 (355)
T ss_dssp EEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEE-BSS---SSBCSCEEEE
T ss_pred EEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEE-ecC---CccccCcceE
Confidence 62 22110012233344456899999999999999999774 59999954 322 233322 000 2333 69999
Q ss_pred EEeccC---CeEEEEcCCCCEEEEEEcCCC
Q psy5792 241 AVDWIA---QNIYWSDPKENVIEVARLTGQ 267 (377)
Q Consensus 241 avD~~~---~~lYwtd~~~~~I~~~~~~g~ 267 (377)
++.... +.|+.+++.+++..+++..+.
T Consensus 235 ai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 235 TIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 996433 579999999999999999754
No 136
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.61 E-value=0.0003 Score=64.05 Aligned_cols=188 Identities=9% Similarity=0.008 Sum_probs=119.8
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++.+. ..+.|+..++..... ............+..+++.+.++.|+... ..+.|...++..........
T Consensus 112 l~~~~-~d~~i~~~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~------- 180 (337)
T 1gxr_A 112 LIVGG-EASTLSIWDLAAPTP--RIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQ------- 180 (337)
T ss_dssp EEEEE-SSSEEEEEECCCC----EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEEC-------
T ss_pred EEEEc-CCCcEEEEECCCCCc--ceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeeeee-------
Confidence 44433 334588888876542 11111112344578999998767776665 56789989987543333333
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
.....+.++++.+.+. .+++-...+.|.+.++.......... ....+..++++|....|+.... ...|...++...
T Consensus 181 ~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~--~~~i~~~~~~~~ 256 (337)
T 1gxr_A 181 GHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME--SSNVEVLHVNKP 256 (337)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET--TSCEEEEETTSS
T ss_pred cccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC--CCcEEEEECCCC
Confidence 2344588899987544 44555566899999998765544444 2455789999997777777763 468888888876
Q ss_pred CeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCce
Q psy5792 312 KQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSK 357 (377)
Q Consensus 312 ~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~ 357 (377)
....+... -..+..+++.+.++.|+ +-. ..+.|...++..+..
T Consensus 257 ~~~~~~~~-~~~v~~~~~~~~~~~l~-~~~-~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 257 DKYQLHLH-ESCVLSLKFAYCGKWFV-STG-KDNLLNAWRTPYGAS 299 (337)
T ss_dssp CEEEECCC-SSCEEEEEECTTSSEEE-EEE-TTSEEEEEETTTCCE
T ss_pred CeEEEcCC-ccceeEEEECCCCCEEE-Eec-CCCcEEEEECCCCeE
Confidence 65544332 35678899986555554 445 577888888875443
No 137
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.60 E-value=0.00053 Score=67.96 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=173.3
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcCCCCceEEE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINLDGSNSTVL 94 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~ 94 (377)
.+.++++.+.+..|. +-+..+.|...+.++. .+.+. .......++++ .++....+-..++.|...+.++.....+
T Consensus 264 ~v~~v~~~~d~~~l~-~~~~d~~i~~w~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~ 340 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIA-SASDDKTVKLWNRNGQLLQTLT--GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTL 340 (577)
T ss_dssp CEEEEEECTTSSEEE-EEETTSCEEEEETTSCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE
T ss_pred CEEEEEEcCCCCEEE-EEeCCCEEEEEeCCCcEEEEEe--cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEE
Confidence 566778877665554 4455678888899998 77664 45566788888 3445555555667788778666665555
Q ss_pred ecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCce
Q psy5792 95 RNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESK 173 (377)
Q Consensus 95 ~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~ 173 (377)
..... +.++++ +++.+ .++.+.. .+.|+..+..+...
T Consensus 341 ~~~~~~v~~~~~-s~~g~---------------------------------------~l~~~~~-dg~v~~~~~~~~~~- 378 (577)
T 2ymu_A 341 TGHSSSVWGVAF-SPDGQ---------------------------------------TIASASD-DKTVKLWNRNGQLL- 378 (577)
T ss_dssp CCCSSCEEEEEE-CTTSS---------------------------------------EEEEEET-TSEEEEEETTCCEE-
T ss_pred eCCCCCEEEEEE-CCCCC---------------------------------------EEEEEeC-CCEEEEEcCCCCEE-
Confidence 43222 444433 22221 3333333 33577666554321
Q ss_pred eeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEc
Q psy5792 174 VTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd 253 (377)
..+ ......+.++++.+.+..|.... ..+.|...+.++...+.+.. .-..+.++++.+.+..| .+-
T Consensus 379 --~~~--~~~~~~v~~~~~s~dg~~l~~~~-~d~~v~~~~~~~~~~~~~~~--------~~~~v~~~~~s~d~~~l-~~~ 444 (577)
T 2ymu_A 379 --QTL--TGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTG--------HSSSVWGVAFSPDDQTI-ASA 444 (577)
T ss_dssp --EEE--ECCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTCCEEEEEEC--------CSSCEEEEEECTTSSEE-EEE
T ss_pred --EEe--cCCCCCeEEEEECCCCCEEEEEe-CCCEEEEEeCCCCEEEEecC--------CCCCeEEEEECCCCCEE-EEE
Confidence 111 12334578899988666665554 56778877777654444432 33457889998755544 455
Q ss_pred CCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCC
Q psy5792 254 PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKN 333 (377)
Q Consensus 254 ~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~ 333 (377)
...+.|...+++++....+.. ......++++.|...+|..+.. ...|...+.+|...+.+... -...+.+++.+.+
T Consensus 445 ~~d~~v~~w~~~~~~~~~~~~-~~~~v~~~~~spd~~~las~~~--d~~i~iw~~~~~~~~~~~~h-~~~v~~l~~s~dg 520 (577)
T 2ymu_A 445 SDDKTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASASD--DKTVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDG 520 (577)
T ss_dssp ETTSEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSCEEEEEET--TSEEEEEETTSCEEEEEECC-SSCEEEEEECTTS
T ss_pred cCCCEEEEEECCCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeC--CCEEEEEcCCCCEEEEEeCC-CCCEEEEEEcCCC
Confidence 556789999998887666654 3556789999996666655543 46777777887766655443 3567889997655
Q ss_pred CEEEEEEeCCCCeEEEEEccCCceEE
Q psy5792 334 KRVYWCYSVGSNVLESMDYSGGSKMQ 359 (377)
Q Consensus 334 ~~LYw~d~~~~~~i~~~~~~G~~~~~ 359 (377)
..|. +-. ..+.|.-.+++|...++
T Consensus 521 ~~l~-s~~-~dg~v~lwd~~~~~~~~ 544 (577)
T 2ymu_A 521 QTIA-SAS-DDKTVKLWNRNGQLLQT 544 (577)
T ss_dssp SCEE-EEE-TTSEEEEECTTSCEEEE
T ss_pred CEEE-EEE-CcCEEEEEeCCCCEEEE
Confidence 5554 444 56778777777643333
No 138
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.59 E-value=0.00064 Score=70.41 Aligned_cols=280 Identities=11% Similarity=0.054 Sum_probs=170.9
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
+.+.+++++++++.|.... ..+.|...++... ..++. .......++++ .+..|..+ ..++.|...+ .+|+.
T Consensus 14 ~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQ--VTETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEK 89 (814)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCE
T ss_pred CceEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEe--cCCCcEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcE
Confidence 3678999999888776654 5688999997655 55554 44556788888 33445544 4467888888 66766
Q ss_pred eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCC
Q psy5792 91 STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNK 169 (377)
Q Consensus 91 ~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~ 169 (377)
...+..... +..+.+ +++. .+|+.+. ..|.|+..+++.
T Consensus 90 ~~~~~~~~~~v~~~~~-s~~~---------------------------------------~~l~~~~-~dg~i~vw~~~~ 128 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAV-HPTK---------------------------------------PYVLSGS-DDLTVKLWNWEN 128 (814)
T ss_dssp EEEEECCSSCEEEEEE-CSSS---------------------------------------SEEEEEE-TTSEEEEEEGGG
T ss_pred EEEEecCCCCEEEEEE-eCCC---------------------------------------CEEEEEc-CCCEEEEEECCC
Confidence 666553333 444443 3322 1344443 334688888765
Q ss_pred CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcE-EEEeccccCCCCCCCCcceEEEecc-CC
Q psy5792 170 NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRE-NIIEYVETGDPTPVDQFTDIAVDWI-AQ 247 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~-~i~~~~~~~~~~~~~~p~~iavD~~-~~ 247 (377)
... ..... ......+..+++.+.++.++++-...+.|...++...... .+.. .....+..+++.+. .+
T Consensus 129 ~~~--~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 129 NWA--LEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT-------GQERGVNYVDYYPLPDK 198 (814)
T ss_dssp TSE--EEEEE-ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC-------CCTTCCCEEEECCSTTC
T ss_pred Cce--EEEEE-cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec-------CCCCCEEEEEEEECCCC
Confidence 422 11111 1233457889998855556666557789999998654433 3332 22245777888762 34
Q ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEE
Q psy5792 248 NIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDI 327 (377)
Q Consensus 248 ~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~gl 327 (377)
.++++-...++|.+.++........+.........++++|....|+.... .+.|...++...............+..+
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~~v~~~ 276 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE--DGTLKIWNSSTYKVEKTLNVGLERSWCI 276 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET--TSCEEEEETTTCSEEEEECCSSSSEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcEEEEeecCCCcEEEE
Confidence 55566666789999998776654444544566789999996666665543 4677777776544333333333556677
Q ss_pred EEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 328 TLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 328 alD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
++.+.+..++.+-. ..+.+..+++.
T Consensus 277 ~~~~~~~~~~~~~~-~~~~~~~~~~~ 301 (814)
T 3mkq_A 277 ATHPTGRKNYIASG-FDNGFTVLSLG 301 (814)
T ss_dssp EECTTCGGGEEEEE-ETTEEEEEECS
T ss_pred EEccCCCceEEEEE-eCCCEEEEEcC
Confidence 77665555544444 44555555543
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.57 E-value=5e-05 Score=67.67 Aligned_cols=194 Identities=10% Similarity=0.044 Sum_probs=128.8
Q ss_pred EEEEEeCCCCeEEEEEcCC-CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC---CCcEEEEEcCCCCcEEEEecc
Q psy5792 151 FILFSVNSGYDIMGIKYNK-NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID---HGTISRTHRDGTGRENIIEYV 226 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~---~~~I~~~~~~G~~~~~i~~~~ 226 (377)
.|+++... .|..+++++ ... ..+........+..+++.+.+..|+++... ...|+.++.++...+.+..
T Consensus 55 ~l~~~~~~--~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 127 (297)
T 2ojh_A 55 YLLLNSEG--LLYRLSLAGDPSP---EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK-- 127 (297)
T ss_dssp EEEEEETT--EEEEEESSSCCSC---EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS--
T ss_pred EEEEEcCC--eEEEEeCCCCCCc---eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeec--
Confidence 46665544 499999887 543 222212222446678888888889888743 4689989887655444332
Q ss_pred ccCCCCCCCCcceEEEeccCCeEEEEcCCCC--EEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEec-CCCCeE
Q psy5792 227 ETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN--VIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSES-GKIPLI 303 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~--~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~-g~~~~I 303 (377)
...+..+++.+.++.|+++....+ +|+..++++.....+.. ....+..++++|...+|+++.. ....+|
T Consensus 128 -------~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 128 -------NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp -------SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC-SSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred -------CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc-CCCccccceECCCCCEEEEEecCCCCccE
Confidence 224777888877778887665545 56666677665544433 3456789999998888888753 235788
Q ss_pred EEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCC----------CeEEEEEccCCceEEEE
Q psy5792 304 ARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGS----------NVLESMDYSGGSKMQLK 361 (377)
Q Consensus 304 ~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~----------~~i~~~~~~G~~~~~~~ 361 (377)
+..++++.....+... -.....+++++.++.|+++.. .. ..|...+++++..+.+.
T Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 200 WRVRVDGSSVERITDS-AYGDWFPHPSPSGDKVVFVSY-DADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEETTSSCEEECCCC-SEEEEEEEECTTSSEEEEEEE-ETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EEECCCCCCcEEEecC-CcccCCeEECCCCCEEEEEEc-CCCCCcccccCceEEEEEecCCCCceeee
Confidence 8888887766555433 234567888888888888766 42 56999999877655554
No 140
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.55 E-value=6e-05 Score=76.56 Aligned_cols=284 Identities=9% Similarity=0.021 Sum_probs=161.7
Q ss_pred CCccccccCCCCeEEEEeC--C---CCcEEEEEcCCcEEEEEeCCCCCceE---------EEEEE----CCe-EEEEcCC
Q psy5792 17 AVASTLKPQSGPFVYGVKT--L---SHSLHYVNIEVKVAKVVSMPDAAQVV---------AAVFY----KGR-IIYSDAN 77 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~--~---~~~I~~~~~dG~~~~i~~~~~~~~p~---------~lav~----~~~-ly~td~~ 77 (377)
.+..++++. +++||+.. . ...|.....+|..+++. ....... +.++. +++ |+++...
T Consensus 25 ~~~~~~~s~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 25 RPACVGAVG--DEVWWVAPRPAEAGRATLVRRRADGAEESAL--PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp CCEEEEEET--TEEEEEEEETTTTTEEEEEEECTTSCEEESS--CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred ccceeEEcC--CeEEEEecCcccCCcEEEEEECCCCCcceeC--CCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 556666763 58888876 2 23455553333355553 1111111 23333 677 8888777
Q ss_pred CCceEEEcCC--C-CceEEEecC-----CC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCC
Q psy5792 78 DGNIRSINLD--G-SNSTVLRNN-----AG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGI 148 (377)
Q Consensus 78 ~~~I~~~~~~--g-~~~~~~~~~-----~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~ 148 (377)
+..|+.++.+ | .....+... .. +.++. ++++.+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~-~spDg~------------------------------------- 142 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPV-LLPERG------------------------------------- 142 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEE-EETTTT-------------------------------------
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcE-ECCCCC-------------------------------------
Confidence 7889999966 4 444444321 11 22332 234332
Q ss_pred CcEEEEEeCC---------CCeEEEEEcCC------CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC-------
Q psy5792 149 SDFILFSVNS---------GYDIMGIKYNK------NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH------- 206 (377)
Q Consensus 149 ~~~l~~s~~~---------~~~I~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~------- 206 (377)
.|+++... ...|..+++++ ... ..+. ........++++.+.+++|+++....
T Consensus 143 --~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~l~-~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 143 --EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV---RELS-DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp --EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---EESS-CSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred --EEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---eEEE-ecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 35444322 02488888887 322 1111 02233456778889889999887443
Q ss_pred CcEEEEEcCC-C---CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCC--EEEEEEcCCCeEEEEeeCCCCC-
Q psy5792 207 GTISRTHRDG-T---GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN--VIEVARLTGQYRYVLISGGVDQ- 279 (377)
Q Consensus 207 ~~I~~~~~~G-~---~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~--~I~~~~~~g~~~~~l~~~~~~~- 279 (377)
..|+.+++++ . ..+.+.. ..-..+..+++.+.++ ||++....+ +|++.++++...+.+.......
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~-------~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 288 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLG-------GPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFA 288 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEE-------ETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSS
T ss_pred cEEEEEEECCCCcccccEEeCC-------CCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeeccccccccc
Confidence 4799999984 3 3334433 1234567778876555 776654444 8999998665555554322111
Q ss_pred -------ceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEE-EEeCCCCEEEEEEeCCC---CeEE
Q psy5792 280 -------PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDI-TLDRKNKRVYWCYSVGS---NVLE 348 (377)
Q Consensus 280 -------P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~gl-alD~~~~~LYw~d~~~~---~~i~ 348 (377)
...+++.|.+..+|.+.. ...+|+++++++...+.+... .....++ +.| .++++++-. .. ..|+
T Consensus 289 ~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~-~~~~~~~~s~~--~~~~~~~~~-~~~~~~~i~ 363 (662)
T 3azo_A 289 GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGP-WTEWAATLTVS--GTRAVGVAA-SPRTAYEVV 363 (662)
T ss_dssp CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSS-CCEEEEEEEEE--TTEEEEEEE-ETTEEEEEE
T ss_pred CccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCC-CCeEEEEEecC--CCEEEEEEc-CCCCCCEEE
Confidence 357888775444444444 467899999987665554332 2334455 554 566766654 33 3788
Q ss_pred EEEccCCceEEEE
Q psy5792 349 SMDYSGGSKMQLK 361 (377)
Q Consensus 349 ~~~~~G~~~~~~~ 361 (377)
.++++++..+.+.
T Consensus 364 ~~d~~~g~~~~l~ 376 (662)
T 3azo_A 364 ELDTVTGRARTIG 376 (662)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCceEEee
Confidence 8888877666554
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.54 E-value=0.00018 Score=73.54 Aligned_cols=186 Identities=12% Similarity=0.123 Sum_probs=112.8
Q ss_pred eEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCC----CcEEEEEcCCC-CcEEEEeccccCCCCCC
Q psy5792 161 DIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDH----GTISRTHRDGT-GRENIIEYVETGDPTPV 234 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~----~~I~~~~~~G~-~~~~i~~~~~~~~~~~~ 234 (377)
.|..+++++... ..+... .....+..+++.+.++.|+++.... ..|+.+++++. ..+.+... . .....
T Consensus 236 ~l~~~d~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~--~-~~~~~ 309 (706)
T 2z3z_A 236 TVGIYHLATGKT---VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE--T-DKHYV 309 (706)
T ss_dssp EEEEEETTTTEE---EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE--E-CSSCC
T ss_pred EEEEEECCCCce---EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc--c-CCCeE
Confidence 366777765422 111111 1123467889988888898865432 37888888765 33444320 0 00111
Q ss_pred CCcceEEEec--cCCeEEEEcCC-CCEEEEEEcCCCeEEEEeeCCCCCcee-EEEcCCCCeEEEEecCCC---CeEEEEe
Q psy5792 235 DQFTDIAVDW--IAQNIYWSDPK-ENVIEVARLTGQYRYVLISGGVDQPSA-LAVDPESGYLFWSESGKI---PLIARAG 307 (377)
Q Consensus 235 ~~p~~iavD~--~~~~lYwtd~~-~~~I~~~~~~g~~~~~l~~~~~~~P~~-iavdp~~g~lywtd~g~~---~~I~r~~ 307 (377)
....++++.+ .++.||.++.. ..+|+..+.+|...+.+... ...... ++++|.+..||++..... .+|++.+
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~-~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG-EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS-SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC-CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 1235678876 45545544432 35788888888766555432 222344 799998889999875422 4899999
Q ss_pred cCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCC---CeEEEEEccCCc
Q psy5792 308 LDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGS---NVLESMDYSGGS 356 (377)
Q Consensus 308 ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~---~~i~~~~~~G~~ 356 (377)
+++...+.+.. ......+++.+.+++|.++-. .. ..|+..+.+++.
T Consensus 389 ~~~~~~~~l~~--~~~~~~~~~spdg~~l~~~~~-~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 389 IKGGKTKDLTP--ESGMHRTQLSPDGSAIIDIFQ-SPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TTCCCCEESCC--SSSEEEEEECTTSSEEEEEEE-CSSCSCEEEEEESSSCE
T ss_pred cCCCCceeccC--CCceEEEEECCCCCEEEEEec-CCCCCcEEEEEECCCCe
Confidence 88766555443 244677888877777877644 32 568888888765
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.54 E-value=4.1e-05 Score=70.50 Aligned_cols=226 Identities=10% Similarity=-0.016 Sum_probs=133.8
Q ss_pred EEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCC--CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccc
Q psy5792 63 AAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNA--GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSL 138 (377)
Q Consensus 63 ~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~--~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~ 138 (377)
|+++ .++++|++....+.|..++ .+|+....+.... .|.++++ +++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-s~dg---------------------------- 54 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMM-APDN---------------------------- 54 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEE-CTTS----------------------------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEE-CCCC----------------------------
Confidence 4455 5678999998889999999 6666555554332 3555554 2222
Q ss_pred cCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCC-----CCceEEEEEECCCCEEEEEEcC--------
Q psy5792 139 AAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSK-----VSLAAKVDFHAAEDYIYWVDID-------- 205 (377)
Q Consensus 139 ~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~d~~~~~ly~sd~~-------- 205 (377)
..++++....+.|..+++..... .....+.. ...+.++++++.++.||+++..
T Consensus 55 -----------~~~~v~~~~~~~i~~~d~~t~~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 55 -----------RTAYVLNNHYGDIYGIDLDTCKN---TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp -----------SEEEEEETTTTEEEEEETTTTEE---EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred -----------CEEEEEeCCCCcEEEEeCCCCcE---EEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 24667766556799998876532 11222222 2236788999988899999854
Q ss_pred ---CCcEEEEEcCCCC---cEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCC-C
Q psy5792 206 ---HGTISRTHRDGTG---RENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGV-D 278 (377)
Q Consensus 206 ---~~~I~~~~~~G~~---~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~-~ 278 (377)
.+.|..+++.... ...... .-..+.++++++.+. ||+++. .|.+.++........+.... .
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~-l~~~~~---~i~~~d~~~~~~~~~~~~~~~~ 188 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFP--------MPRQVYLMRAADDGS-LYVAGP---DIYKMDVKTGKYTVALPLRNWN 188 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEE--------CCSSCCCEEECTTSC-EEEESS---SEEEECTTTCCEEEEECSTTCC
T ss_pred ccCCCeEEEEECCCccccceeeecc--------CCCcccceeECCCCc-EEEccC---cEEEEeCCCCceeccccccccC
Confidence 5789999986421 112222 123588899997655 888643 38888886544332332211 0
Q ss_pred -----------------------CceeEEEcCCC---------CeEEE-EecCCCCeEEEEecCCCCeEEEEecCCCCce
Q psy5792 279 -----------------------QPSALAVDPES---------GYLFW-SESGKIPLIARAGLDGKKQTILAQEIIMPIK 325 (377)
Q Consensus 279 -----------------------~P~~iavdp~~---------g~lyw-td~g~~~~I~r~~ldG~~~~~l~~~~~~~P~ 325 (377)
.|.++++.+.. ...|+ .+. ...++....++. .-..|.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~ 258 (349)
T 1jmx_B 189 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL-KTGKTHTQEFAD---------LTELYF 258 (349)
T ss_dssp CTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET-TTCCEEEEEEEE---------CSSCEE
T ss_pred CccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec-cCCcEEeccccc---------CCCcce
Confidence 45566665321 23333 232 133343333211 134688
Q ss_pred EEEEeC-CCCEEEEEEeCCCCeEEEEEccCCce
Q psy5792 326 DITLDR-KNKRVYWCYSVGSNVLESMDYSGGSK 357 (377)
Q Consensus 326 glalD~-~~~~LYw~d~~~~~~i~~~~~~G~~~ 357 (377)
++++++ .++.||.+ . +.|..+++..+..
T Consensus 259 ~~~~sp~dg~~l~~~-~---~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 259 TGLRSPKDPNQIYGV-L---NRLAKYDLKQRKL 287 (349)
T ss_dssp EEEECSSCTTEEEEE-E---SEEEEEETTTTEE
T ss_pred eeEecCCCCCEEEEE-c---CeEEEEECccCeE
Confidence 999988 78888888 4 4788888775443
No 143
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.36 E-value=0.00019 Score=67.36 Aligned_cols=303 Identities=9% Similarity=0.040 Sum_probs=160.1
Q ss_pred CCccccccCCCCeEEEEeCC--CCcEEEEEcCCc-EEEEEeCCCCCceE-EEEE--ECCeEEEEcCCCCceEEEcC-CCC
Q psy5792 17 AVASTLKPQSGPFVYGVKTL--SHSLHYVNIEVK-VAKVVSMPDAAQVV-AAVF--YKGRIIYSDANDGNIRSINL-DGS 89 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~--~~~I~~~~~dG~-~~~i~~~~~~~~p~-~lav--~~~~ly~td~~~~~I~~~~~-~g~ 89 (377)
++..+++.+++++|+++... ...|...++++. .+.+. ....... ++++ .+.+|+++... +.|+.++. .|+
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~ 113 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT--EGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLE 113 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC--CSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCC
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee--cCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCC
Confidence 36778899999998777543 457999999988 66664 2222222 2444 45677666543 36888884 444
Q ss_pred ceEEEecCCC--ceeEEeeecCCC-CcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe----CCCCeE
Q psy5792 90 NSTVLRNNAG--ISDFILFSVNSG-YDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV----NSGYDI 162 (377)
Q Consensus 90 ~~~~~~~~~~--p~~i~v~~~~~~-~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~----~~~~~I 162 (377)
...+...... |.|-.+...... ....... .+..+|.+ ..+++.. .....|
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~----------~~~~spdg-------------~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEIL----------KRDWQPLT-------------SWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEE----------GGGCCCCC-------------SHHHHHHHHHTCCCEEE
T ss_pred cEEEEecccccCCCCCEEEeccCCcccccccc----------ccccCCCC-------------cceeeeeeccCCCcceE
Confidence 4444332222 332222111000 0000000 00000000 0011110 111126
Q ss_pred EEEEcCCCCceeeEEEEecCCCCceEEEEEEC-CCCEEEEEEcCC-----CcEEEEEcCCCCcEEEEeccccCCCCC-CC
Q psy5792 163 MGIKYNKNESKVTQVLGPLSKVSLAAKVDFHA-AEDYIYWVDIDH-----GTISRTHRDGTGRENIIEYVETGDPTP-VD 235 (377)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~-~~~~ly~sd~~~-----~~I~~~~~~G~~~~~i~~~~~~~~~~~-~~ 235 (377)
..+++.+... ..+. ........+++.+ .+++|+++.... .+|+.+++++...+.+.. .. ..
T Consensus 171 ~~~d~~~g~~---~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-------~~~~~ 238 (396)
T 3c5m_A 171 IKVDIETGEL---EVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-------HAEGE 238 (396)
T ss_dssp EEEETTTCCE---EEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-------CCTTE
T ss_pred EEEECCCCcE---Eeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-------cCCCc
Confidence 6666655433 1121 1223456777777 466677765332 479999998765444432 11 12
Q ss_pred CcceEEEeccCCeEEEEcC--CC--CEEEEEEcCCCeEEEEeeCCCCCceeEEEcC-CCCeEEEEec-------------
Q psy5792 236 QFTDIAVDWIAQNIYWSDP--KE--NVIEVARLTGQYRYVLISGGVDQPSALAVDP-ESGYLFWSES------------- 297 (377)
Q Consensus 236 ~p~~iavD~~~~~lYwtd~--~~--~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp-~~g~lywtd~------------- 297 (377)
.+..+++.+.++.|+++.. .. +.|.+.++++...+.+.... ... ++..| ....++.+..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------C
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 3666788877777777632 23 34999999876555444321 112 67777 5555554321
Q ss_pred -CCCCeEEEEecCCCCeEEEEecCCC----------CceEEEEeCCCCEEEEEEeC-CCCeEEEEEccCCceEEE
Q psy5792 298 -GKIPLIARAGLDGKKQTILAQEIIM----------PIKDITLDRKNKRVYWCYSV-GSNVLESMDYSGGSKMQL 360 (377)
Q Consensus 298 -g~~~~I~r~~ldG~~~~~l~~~~~~----------~P~glalD~~~~~LYw~d~~-~~~~i~~~~~~G~~~~~~ 360 (377)
.....|+..++++...+.+...... .+..+++.+.+++|+++... ....|+.++++++..+.+
T Consensus 316 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp CCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred cCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence 0146899999987665555543211 14456777778899988751 345789999997755544
No 144
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.36 E-value=0.0015 Score=59.56 Aligned_cols=279 Identities=11% Similarity=0.047 Sum_probs=165.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
+.+.++++.+.++.|. +-+..+.|..-|+... .+.+. ........+++ .++.+..+-..++.|...+ .+|+..
T Consensus 14 ~~V~~~~fsp~~~~l~-s~~~dg~v~lWd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVL-TTLYSGRVELWNYETQVEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp SCEEEEEECSSSSEEE-EEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEE-EEcCCCcEEEEECCCCceeEEee--ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 3578899998876664 4456788999998766 55553 33444566777 3444555555677888888 667766
Q ss_pred EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 92 TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 92 ~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
..+..... +..+++ +++.. ++++....+.|+..++...
T Consensus 91 ~~~~~h~~~v~~~~~-~~~~~----------------------------------------~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAV-HPTKP----------------------------------------YVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp EEEECCSSCEEEEEE-CSSSS----------------------------------------EEEEEETTSCEEEEEGGGT
T ss_pred EEEeCCCCcEEEEEE-cCCCC----------------------------------------EEEEECCCCeEEEEECCCC
Confidence 66654333 455553 33322 3344444446888887654
Q ss_pred CceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc-EEEEeccccCCCCCCCCcceEEEecc-CC
Q psy5792 171 ESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR-ENIIEYVETGDPTPVDQFTDIAVDWI-AQ 247 (377)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~-~~i~~~~~~~~~~~~~~p~~iavD~~-~~ 247 (377)
.. ....+. ....+..+++++.++.++.+-...+.|...++..... ..+.. ........+++.+. .+
T Consensus 130 ~~----~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 130 WA----LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT-------GQERGVNYVDYYPLPDK 198 (304)
T ss_dssp TE----EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC-------CCTTCEEEEEECCSTTC
T ss_pred cc----hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc-------CCcCcEEEEEEEEcCCC
Confidence 22 111122 2345788999986666666666778888888864332 23322 12233455666543 34
Q ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEE
Q psy5792 248 NIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDI 327 (377)
Q Consensus 248 ~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~gl 327 (377)
.+..+-...++|.+-++....+...+.........++++|....|.-+.. ...|..-++........+.........+
T Consensus 199 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--Dg~i~iWd~~~~~~~~~~~~~~~~~~~~ 276 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE--DGTLKIWNSSTYKVEKTLNVGLERSWCI 276 (304)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET--TSCEEEEETTTCCEEEEECCSSSSEEEE
T ss_pred CEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcC--CCeEEEEECCCCceeeeccCCCccEEEE
Confidence 56667667789999999876655445555666789999996555554442 4667766765443333233224456677
Q ss_pred EEeCCCCEEEEEEeCCCCeEEEEEc
Q psy5792 328 TLDRKNKRVYWCYSVGSNVLESMDY 352 (377)
Q Consensus 328 alD~~~~~LYw~d~~~~~~i~~~~~ 352 (377)
++.+.++..|.+-. ..+.+..+++
T Consensus 277 ~~~~~~~~~~~asg-~~~g~~~~~~ 300 (304)
T 2ynn_A 277 ATHPTGRKNYIASG-FDNGFTVLSL 300 (304)
T ss_dssp EECTTCGGGCEEEE-ETTEEEEEEC
T ss_pred EECCCCCceEEEEe-cCCceEEEEe
Confidence 77665555544444 4444444443
No 145
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.34 E-value=7.1e-06 Score=80.38 Aligned_cols=157 Identities=11% Similarity=0.068 Sum_probs=104.1
Q ss_pred CCCCceEEEEEECCCC-EEEEEEcCCCcEEEEEcCCCC-cEEEEeccccCCCC-----CCCCcceEEEecc---CCeEEE
Q psy5792 182 SKVSLAAKVDFHAAED-YIYWVDIDHGTISRTHRDGTG-RENIIEYVETGDPT-----PVDQFTDIAVDWI---AQNIYW 251 (377)
Q Consensus 182 ~~~~~~~~l~~d~~~~-~ly~sd~~~~~I~~~~~~G~~-~~~i~~~~~~~~~~-----~~~~p~~iavD~~---~~~lYw 251 (377)
+++..|.+|++.+.+. +||+++. .++|++++.+|.. .+.+.... ..... ....+-+||+++. ++.||+
T Consensus 11 ~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~~-~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 11 SGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDIH-KLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEECT-TTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred cCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCCc-ceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 4678899999998663 7999985 5899999877642 12222100 00001 1345789999974 678988
Q ss_pred EcCC------------CCEEEEEEcCCC--------eEEEEee----CCCCCceeEEEcCCCCeEEEEe--cC-------
Q psy5792 252 SDPK------------ENVIEVARLTGQ--------YRYVLIS----GGVDQPSALAVDPESGYLFWSE--SG------- 298 (377)
Q Consensus 252 td~~------------~~~I~~~~~~g~--------~~~~l~~----~~~~~P~~iavdp~~g~lywtd--~g------- 298 (377)
+... ..+|.++.++.. ..++|+. ........|+++| .|+||++- .+
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~ 167 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDME 167 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHH
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccc
Confidence 7532 137888888531 2344443 2234567899998 78999984 11
Q ss_pred -------CCCeEEEEecCCCC-------------------eEEEEecCCCCceEEEEeCCCC------EEEEEEe
Q psy5792 299 -------KIPLIARAGLDGKK-------------------QTILAQEIIMPIKDITLDRKNK------RVYWCYS 341 (377)
Q Consensus 299 -------~~~~I~r~~ldG~~-------------------~~~l~~~~~~~P~glalD~~~~------~LYw~d~ 341 (377)
...+|.|++.||+. +..+....+.+|.||++|+.++ ++|.+|.
T Consensus 168 ~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 168 EMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred cccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 03689999999941 2245555699999999998754 6777775
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.33 E-value=0.00035 Score=71.80 Aligned_cols=163 Identities=15% Similarity=0.155 Sum_probs=103.1
Q ss_pred CceEEEEEECCCCEEEEEEc----CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC--CE
Q psy5792 185 SLAAKVDFHAAEDYIYWVDI----DHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE--NV 258 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~----~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~--~~ 258 (377)
..+..+++ +.++.|+++.. ....|+.+++++...+.+..... ...+.....+++.+.++ ++++.... .+
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~---~~~~~~~~~~~~spdg~-~~~~~~~~g~~~ 361 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETS---PTWVPLHNSLRFLDDGS-ILWSSERTGFQH 361 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEEC---SSCCCCCSCCEECTTSC-EEEEECTTSSCE
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCC---CCcCCcCCceEECCCCe-EEEEecCCCccE
Confidence 34677888 87888988754 23478888887655554443100 00111235778887555 66664443 47
Q ss_pred EEEEEcCCCeEEEEeeCCCCCceeE-EEcCCCCeEEEEecCC---CCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCC
Q psy5792 259 IEVARLTGQYRYVLISGGVDQPSAL-AVDPESGYLFWSESGK---IPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNK 334 (377)
Q Consensus 259 I~~~~~~g~~~~~l~~~~~~~P~~i-avdp~~g~lywtd~g~---~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~ 334 (377)
|+..+++|. .+.+... ......+ +++|.+..||++-... ..+|++++++|...+.|.. ......+++.+.++
T Consensus 362 l~~~~~~~~-~~~l~~~-~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~~~spdg~ 437 (741)
T 2ecf_A 362 LYRIDSKGK-AAALTHG-NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK--APGMHSASFARNAS 437 (741)
T ss_dssp EEEECSSSC-EEESCCS-SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC--SCSEEEEEECTTSS
T ss_pred EEEEcCCCC-eeeeeec-ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc--CCCceEEEECCCCC
Confidence 888888887 5444432 3344566 5999888898876432 4579999998876666544 23445788888888
Q ss_pred EEEEEEeCCC---CeEEEEEccCCce
Q psy5792 335 RVYWCYSVGS---NVLESMDYSGGSK 357 (377)
Q Consensus 335 ~LYw~d~~~~---~~i~~~~~~G~~~ 357 (377)
+|.++-. .. ..++.++.+|+..
T Consensus 438 ~l~~~~~-~~~~p~~~~l~~~~~~~~ 462 (741)
T 2ecf_A 438 VYVDSWS-NNSTPPQIELFRANGEKI 462 (741)
T ss_dssp EEEEEEE-ETTEEEEEEEEETTSCEE
T ss_pred EEEEEec-CCCCCCeEEEEEcCCCeE
Confidence 8877654 32 3577777776543
No 147
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.32 E-value=0.0024 Score=60.44 Aligned_cols=276 Identities=9% Similarity=-0.016 Sum_probs=166.6
Q ss_pred ccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC
Q psy5792 23 KPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG 99 (377)
Q Consensus 23 ~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~ 99 (377)
++.....++ +-+..+.|...+++.. ...+...........+++ .++.+.++-..++.|...+ .+++....+.....
T Consensus 99 ~~~s~~~l~-~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 177 (401)
T 4aez_A 99 LDWSNLNVV-AVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA 177 (401)
T ss_dssp EEECTTSEE-EEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EeecCCCEE-EEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC
Confidence 444444443 4445778999998776 444432234556788888 2333344434567888888 56665555543222
Q ss_pred -ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEE
Q psy5792 100 -ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVL 178 (377)
Q Consensus 100 -p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~ 178 (377)
+..+.. ++ . ++++....+.|+..++..... ...
T Consensus 178 ~v~~~~~-~~-----------------------------------------~-~l~~~~~dg~i~i~d~~~~~~---~~~ 211 (401)
T 4aez_A 178 RVGCLSW-NR-----------------------------------------H-VLSSGSRSGAIHHHDVRIANH---QIG 211 (401)
T ss_dssp CEEEEEE-ET-----------------------------------------T-EEEEEETTSEEEEEETTSSSC---EEE
T ss_pred ceEEEEE-CC-----------------------------------------C-EEEEEcCCCCEEEEecccCcc---eee
Confidence 333333 11 1 333333345688888874332 111
Q ss_pred EecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcC--CC
Q psy5792 179 GPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDP--KE 256 (377)
Q Consensus 179 ~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~--~~ 256 (377)
........+.++++.+.+..|+... ..+.|...++.......... .....+.++++.+.+.+++.+-. ..
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~ll~~~~gs~d 283 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGG-NDNVVQIWDARSSIPKFTKT-------NHNAAVKAVAWCPWQSNLLATGGGTMD 283 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTCSSEEEEEC-------CCSSCCCEEEECTTSTTEEEEECCTTT
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEe-CCCeEEEccCCCCCccEEec-------CCcceEEEEEECCCCCCEEEEecCCCC
Confidence 1122345688999998665655554 56889989987544333333 33445889999987888888865 57
Q ss_pred CEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEE--EecCCCCceEEEEeCCCC
Q psy5792 257 NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL--AQEIIMPIKDITLDRKNK 334 (377)
Q Consensus 257 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l--~~~~~~~P~glalD~~~~ 334 (377)
+.|...++........+.. .....++++.|....|+.+.....+.|...++........ ....-.....+++.+.+.
T Consensus 284 ~~i~i~d~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~ 362 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDA-GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR 362 (401)
T ss_dssp CEEEEEETTTCCEEEEEEC-SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS
T ss_pred CEEEEEECCCCCEEEEEeC-CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCC
Confidence 8999999976554444443 4568999999977777776422356777777765433322 222235677899986555
Q ss_pred EEEEEEeCCCCeEEEEEccCCc
Q psy5792 335 RVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 335 ~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
.|+. -. ..+.|...++..+.
T Consensus 363 ~l~s-~~-~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 363 ILST-AA-SDENLKFWRVYDGD 382 (401)
T ss_dssp EEEE-EC-TTSEEEEEECCC--
T ss_pred EEEE-Ee-CCCcEEEEECCCCc
Confidence 5554 44 57888888887543
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.32 E-value=0.00017 Score=73.78 Aligned_cols=167 Identities=11% Similarity=0.138 Sum_probs=105.4
Q ss_pred eEEEEEECCCCEEEEEEc--------------------------------CCCcEEEEEcCCCCcEEEEeccccCCCCCC
Q psy5792 187 AAKVDFHAAEDYIYWVDI--------------------------------DHGTISRTHRDGTGRENIIEYVETGDPTPV 234 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~--------------------------------~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~ 234 (377)
+.++++.+.+.+|+++.. ....|+.+++++.....+... ...-
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~-----~~~~ 257 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG-----EPKE 257 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC-----SCTT
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC-----CCCc
Confidence 468888888888888752 224688888875443332210 0011
Q ss_pred CCcceEEEeccCCeEEEEcCCC----CEEEEEEcCCC-eEEEEeeC-C---CCCceeEEEcC--CCCeEEEEecCCCCeE
Q psy5792 235 DQFTDIAVDWIAQNIYWSDPKE----NVIEVARLTGQ-YRYVLISG-G---VDQPSALAVDP--ESGYLFWSESGKIPLI 303 (377)
Q Consensus 235 ~~p~~iavD~~~~~lYwtd~~~----~~I~~~~~~g~-~~~~l~~~-~---~~~P~~iavdp--~~g~lywtd~g~~~~I 303 (377)
..+..+++.+.++.|+++.... .+|.+.++++. ..+.+... . .....++++.| ...+||.++.....+|
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 2366788887777788854322 37888998876 55555432 1 11236788988 6666666654335789
Q ss_pred EEEecCCCCeEEEEecCCCCceE-EEEeCCCCEEEEEEeCCCC----eEEEEEccCCceEEE
Q psy5792 304 ARAGLDGKKQTILAQEIIMPIKD-ITLDRKNKRVYWCYSVGSN----VLESMDYSGGSKMQL 360 (377)
Q Consensus 304 ~r~~ldG~~~~~l~~~~~~~P~g-lalD~~~~~LYw~d~~~~~----~i~~~~~~G~~~~~~ 360 (377)
+..+.+|...+.+.... ..... +++++.+++||++.. ..+ .|+.++.+++..+.+
T Consensus 338 ~~~~~~~~~~~~l~~~~-~~v~~~~~~spdg~~l~~~~~-~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGE-WEVTNFAGFDPKGTRLYFEST-EASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEEETTSCEEEECCCSS-SCEEEEEEECTTSSEEEEEES-SSCTTCBEEEEEETTCCCCEES
T ss_pred EEEECCCCEEEecCCCC-eEEEeeeEEcCCCCEEEEEec-CCCCceEEEEEEEcCCCCceec
Confidence 99988877665554321 22334 789888889999877 544 899999887654433
No 149
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.31 E-value=0.0021 Score=59.12 Aligned_cols=283 Identities=7% Similarity=0.034 Sum_probs=165.7
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEE-CCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFY-KGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
..+.++++.+.+..|+.. ...+.|...++... ..++. .......++++. ++..+++-..++.|...+ .+++..
T Consensus 33 ~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSC-SKDSSASVWYSLNGERLGTLD--GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp SCEEEEEECTTSCEEEEE-ESSSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred ceEEEEEEcCCCCEEEEE-eCCCEEEEEeCCCchhhhhhh--hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 367888998876666544 45678999997665 55442 455567888883 344445545577888888 666666
Q ss_pred EEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCC----CCeEEEEEc
Q psy5792 92 TVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNS----GYDIMGIKY 167 (377)
Q Consensus 92 ~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~----~~~I~~~~l 167 (377)
..+.....+..+.+ +++.. +++.+..+ .+.|...++
T Consensus 110 ~~~~~~~~v~~~~~-~~~~~---------------------------------------~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 110 ATWKSPVPVKRVEF-SPCGN---------------------------------------YFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp EEEECSSCEEEEEE-CTTSS---------------------------------------EEEEEECCBTTBCCEEEEEEE
T ss_pred EEeecCCCeEEEEE-ccCCC---------------------------------------EEEEecCCccCCCCEEEEEEe
Confidence 55553222445443 22221 23333322 123665555
Q ss_pred CCCCce--e-------eEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC-CcEEEEeccccCCCCCCCCc
Q psy5792 168 NKNESK--V-------TQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT-GRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 168 ~~~~~~--~-------~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~-~~~~i~~~~~~~~~~~~~~p 237 (377)
...... . ...+........+..+++++.+..|+... ..+.|...++... ....... .....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-------~~~~~v 221 (369)
T 3zwl_B 150 ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSID-------LHEKSI 221 (369)
T ss_dssp EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEE-------CCSSCE
T ss_pred cCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEe-------cCCCce
Confidence 432210 0 01111112223688899998777776665 5688999998752 2222232 234458
Q ss_pred ceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCC------------eEEE
Q psy5792 238 TDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIP------------LIAR 305 (377)
Q Consensus 238 ~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~------------~I~r 305 (377)
.++++.+.+..| ++-...+.|.+.++........+. .......++++|...+++.+...... .|..
T Consensus 222 ~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 222 SDMQFSPDLTYF-ITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp EEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEE
T ss_pred eEEEECCCCCEE-EEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEE
Confidence 889998754444 555566799999998765444444 34567899999988888887642111 4555
Q ss_pred EecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 306 AGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 306 ~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.++........+.........+++.+.+..|. +-. ..+.|...+++
T Consensus 300 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~-~dg~v~iw~~~ 345 (369)
T 3zwl_B 300 YHKIFEEEIGRVQGHFGPLNTVAISPQGTSYA-SGG-EDGFIRLHHFE 345 (369)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEE-TTSEEEEEEEC
T ss_pred EecCCCcchhheecccCcEEEEEECCCCCEEE-EEc-CCCeEEEEECc
Confidence 55544443333333345677888876555444 444 46677666665
No 150
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.31 E-value=0.00026 Score=66.90 Aligned_cols=290 Identities=11% Similarity=0.028 Sum_probs=167.4
Q ss_pred CcCCccccccCCCCeEEEEe----------CCCCcEEEEEcCCc-E-EEEEeCCCCCceEEEEE-ECCeEEEEcCCCCce
Q psy5792 15 FGAVASTLKPQSGPFVYGVK----------TLSHSLHYVNIEVK-V-AKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNI 81 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d----------~~~~~I~~~~~dG~-~-~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I 81 (377)
+..+..++..+.++.+..+- +..+.|...+++.. . +.+...........+++ .++.++++-..++.|
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeE
Confidence 34677888888876565565 55678888888765 2 22211133445678888 344444444456778
Q ss_pred EEEcCCC----C-ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEE
Q psy5792 82 RSINLDG----S-NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFS 155 (377)
Q Consensus 82 ~~~~~~g----~-~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s 155 (377)
...+... . ....+..... +..+.+ +++. ..++++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~---------------------------------------~~~l~s 131 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKF-NAKQ---------------------------------------DNVLAS 131 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEE-CSSS---------------------------------------TTBEEE
T ss_pred EEeecccccccccchhhccCCccceEEEEE-cCCC---------------------------------------CCEEEE
Confidence 8887322 2 2222222222 333332 2210 123444
Q ss_pred eCCCCeEEEEEcCCCC------ceeeEEEEe-cCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecccc
Q psy5792 156 VNSGYDIMGIKYNKNE------SKVTQVLGP-LSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVET 228 (377)
Q Consensus 156 ~~~~~~I~~~~l~~~~------~~~~~~~~~-~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~ 228 (377)
....+.|+..++.... . ...+.. ......+.++++.+.++.++++-...+.|...++..........
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---- 205 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYT--PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS---- 205 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCC--CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC----
T ss_pred EcCCCeEEEEECCCCcccccccc--ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe----
Confidence 4444458777776553 1 000000 11234577899998756667776678899999987543333332
Q ss_pred CCCCC------CCCcceEEEeccCCeEEEEcCCCC---EEEEEEcCCC-eEEEEee-CCCCCceeEEEcCCCCeEEEEec
Q psy5792 229 GDPTP------VDQFTDIAVDWIAQNIYWSDPKEN---VIEVARLTGQ-YRYVLIS-GGVDQPSALAVDPESGYLFWSES 297 (377)
Q Consensus 229 ~~~~~------~~~p~~iavD~~~~~lYwtd~~~~---~I~~~~~~g~-~~~~l~~-~~~~~P~~iavdp~~g~lywtd~ 297 (377)
.. -..+.++++.+.+.+++++-...+ .|.+.++... .....+. .....+.++++.|..+.++.+-.
T Consensus 206 ---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 282 (416)
T 2pm9_A 206 ---YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG 282 (416)
T ss_dssp ---CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE
T ss_pred ---ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe
Confidence 11 345888999986666666655555 8999998763 2222222 33456789999984444444433
Q ss_pred CCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 298 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 298 g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
....|...++........+...-.....+++.+.+.+++.+-. ..+.|...++...
T Consensus 283 -~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 283 -RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS-FDNKIEVQTLQNL 338 (416)
T ss_dssp -SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC-SSSEEEEEESCCC
T ss_pred -CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe-cCCcEEEEEccCC
Confidence 2467888887654433333332355678999876545666666 6788888887644
No 151
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.28 E-value=0.00018 Score=73.07 Aligned_cols=196 Identities=13% Similarity=0.099 Sum_probs=119.9
Q ss_pred EEEEeCCCCeEEEEEcC--C-CCceeeEEEEecC---CCCceEEEEEECCCCEEEEEEcCC---------CcEEEEEcCC
Q psy5792 152 ILFSVNSGYDIMGIKYN--K-NESKVTQVLGPLS---KVSLAAKVDFHAAEDYIYWVDIDH---------GTISRTHRDG 216 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~--~-~~~~~~~~~~~~~---~~~~~~~l~~d~~~~~ly~sd~~~---------~~I~~~~~~G 216 (377)
|+++......|..++++ + ... ..+.... ......++++.+.++.|+++.... ..|+++++++
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEEEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 66776544458888887 3 332 2222111 234577899999899999876431 4899999987
Q ss_pred ------CCcEEEE-eccccCCCCCCCCcceEEEeccCCeEEEEcCC-------CCEEEEEEcCC-C---eEEEEeeCCCC
Q psy5792 217 ------TGRENII-EYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK-------ENVIEVARLTG-Q---YRYVLISGGVD 278 (377)
Q Consensus 217 ------~~~~~i~-~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~-------~~~I~~~~~~g-~---~~~~l~~~~~~ 278 (377)
...+.+. . .-....++++.+.++.|+|+... ...|++.++++ . ..+.+......
T Consensus 171 ~~~~~~~~~~~l~~~--------~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 171 SAAADRSAVRELSDD--------AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp TTTTCGGGSEESSCS--------CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred CccccCCceeEEEec--------CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 4444443 2 22346678888888889887543 25899999984 3 44445443345
Q ss_pred CceeEEEcCCCCeEEEEe-cCCCCeEEEEecCCCCeEEEEecC--CCC------ceEEEEeCCCCEEEEEEeCCCCeEEE
Q psy5792 279 QPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKKQTILAQEI--IMP------IKDITLDRKNKRVYWCYSVGSNVLES 349 (377)
Q Consensus 279 ~P~~iavdp~~g~lywtd-~g~~~~I~r~~ldG~~~~~l~~~~--~~~------P~glalD~~~~~LYw~d~~~~~~i~~ 349 (377)
.+..++..|... +|++. .....+|++.++++...+.+.... ... ...+++.. +++++++......+|+.
T Consensus 243 ~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 320 (662)
T 3azo_A 243 AIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGKGAAVLGI 320 (662)
T ss_dssp CEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBSSSCEEEE
T ss_pred eEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEcCccEEEE
Confidence 678899998655 55554 322348999998666555544321 111 23456643 45555554414456777
Q ss_pred EEccCCceEEE
Q psy5792 350 MDYSGGSKMQL 360 (377)
Q Consensus 350 ~~~~G~~~~~~ 360 (377)
++.+++..+++
T Consensus 321 ~d~~~~~~~~l 331 (662)
T 3azo_A 321 LDPESGELVDA 331 (662)
T ss_dssp EETTTTEEEEC
T ss_pred EECCCCcEEEe
Confidence 78876654443
No 152
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.28 E-value=6.1e-05 Score=69.13 Aligned_cols=275 Identities=13% Similarity=0.139 Sum_probs=152.5
Q ss_pred cccCCCCcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcC
Q psy5792 9 YTRNPSFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINL 86 (377)
Q Consensus 9 ~~~~~~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~ 86 (377)
|+.........+.++|.. ++||+. +..+.|..+|.+|+ ..... .......++++ .++.||++... |.+++.
T Consensus 13 W~~~~~~~~~~~~~~d~~-g~l~v~-t~~~~l~~~d~~g~~~~~~~--~~~~~~~~~~~~~~g~l~v~t~~---l~~~d~ 85 (330)
T 3hxj_A 13 WEFLIGNSIDSSPILAKN-GTIYLG-SSNKNLYAINTDGSVKWFFK--SGEIIECRPSIGKDGTIYFGSDK---VYAINP 85 (330)
T ss_dssp CTTTSCEEECCCCEECTT-SCEECS-STTTTTEEECTTSCEEESSC--GGGEEEECCEETTTTEECCSSCE---EEEECC
T ss_pred EEEeCCCCcccCceEccC-CeEEEE-cCCCEEEEECCCCcEEEEEe--cCCCcccceEEecCCcEEEecCc---EEEECC
Confidence 333333333456667653 466544 45667899996666 33221 11122345666 47788887543 888876
Q ss_pred CCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 87 DGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 87 ~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
+|+.......... .....+. +..++++... +.|..+
T Consensus 86 ~g~~~~~~~~~~~~~~~~~~~------------------------------------------~~~l~v~t~~-~~l~~~ 122 (330)
T 3hxj_A 86 DGTEKWRFDTKKAIVSDFTIF------------------------------------------EDILYVTSMD-GHLYAI 122 (330)
T ss_dssp CGGGGGGSCC-----CCEEEE------------------------------------------TTEEEEECTT-SEEEEE
T ss_pred CCcEEEEEECCCCcccCceEE------------------------------------------CCEEEEEecC-CEEEEE
Confidence 6644211110000 0001110 1234444422 237777
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
+.++. . ....... ......+..+. ++.||+.. ..+.|++++.+|....... ........+++|.
T Consensus 123 d~~g~-~---~~~~~~~-~~~~~~~~~~~-~g~l~vgt-~~~~l~~~d~~g~~~~~~~--------~~~~~~~~~~~d~- 186 (330)
T 3hxj_A 123 NTDGT-E---KWRFKTK-KAIYATPIVSE-DGTIYVGS-NDNYLYAINPDGTEKWRFK--------TNDAITSAASIGK- 186 (330)
T ss_dssp CTTSC-E---EEEEECS-SCCCSCCEECT-TSCEEEEC-TTSEEEEECTTSCEEEEEE--------CSSCCCSCCEECT-
T ss_pred cCCCC-E---EEEEcCC-CceeeeeEEcC-CCEEEEEc-CCCEEEEECCCCCEeEEEe--------cCCCceeeeEEcC-
Confidence 76632 1 1111111 11223334454 56777765 4578999988843322222 1233466778884
Q ss_pred CCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCce
Q psy5792 246 AQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIK 325 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~ 325 (377)
.++||++. +.|.+.+.+|........ ....+.++++|+ +|.||++.. ...|.+.+.+|......... -..+.
T Consensus 187 ~g~l~v~t---~~l~~~d~~g~~~~~~~~-~~~~~~~~~~~~-~g~l~v~t~--~~gl~~~~~~g~~~~~~~~~-~~~~~ 258 (330)
T 3hxj_A 187 DGTIYFGS---DKVYAINPDGTEKWNFYA-GYWTVTRPAISE-DGTIYVTSL--DGHLYAINPDGTEKWRFKTG-KRIES 258 (330)
T ss_dssp TCCEEEES---SSEEEECTTSCEEEEECC-SSCCCSCCEECT-TSCEEEEET--TTEEEEECTTSCEEEEEECS-SCCCS
T ss_pred CCEEEEEe---CEEEEECCCCcEEEEEcc-CCcceeceEECC-CCeEEEEcC--CCeEEEECCCCCEeEEeeCC-CCccc
Confidence 68898887 678998877765433322 235578899996 689999875 36888887766655444332 23345
Q ss_pred EEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEE
Q psy5792 326 DITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQL 360 (377)
Q Consensus 326 glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~ 360 (377)
.+++| .+++||++.. .+.|.+++.+|......
T Consensus 259 ~~~~~-~~g~l~v~t~--~ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 259 SPVIG-NTDTIYFGSY--DGHLYAINPDGTEKWNF 290 (330)
T ss_dssp CCEEC-TTSCEEEECT--TCEEEEECTTSCEEEEE
T ss_pred cceEc-CCCeEEEecC--CCCEEEECCCCcEEEEE
Confidence 67776 4678887764 46899998875544443
No 153
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.27 E-value=0.0023 Score=58.05 Aligned_cols=270 Identities=9% Similarity=0.017 Sum_probs=159.2
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-----EEEEEeCCCCCceEEEEEE-CCeEEEEcCCCCceEEEc-CCC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-----VAKVVSMPDAAQVVAAVFY-KGRIIYSDANDGNIRSIN-LDG 88 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-----~~~i~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~-~~g 88 (377)
+.+.+++..+.+..|+... .+.|...+++.. ...+...........+++. ++...++-..++.|...+ .++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC
T ss_pred CceEEEEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 4677888888777775554 788888888654 1222111334456778883 333444434567788887 444
Q ss_pred Cc--eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 89 SN--STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 89 ~~--~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
+. ...+..... +..+.+ +++. ..++.+. ..+.|+..
T Consensus 130 ~~~~~~~~~~~~~~i~~~~~-~~~~---------------------------------------~~l~~~~-~dg~v~~~ 168 (337)
T 1gxr_A 130 TPRIKAELTSSAPACYALAI-SPDS---------------------------------------KVCFSCC-SDGNIAVW 168 (337)
T ss_dssp --EEEEEEECSSSCEEEEEE-CTTS---------------------------------------SEEEEEE-TTSCEEEE
T ss_pred CcceeeecccCCCceEEEEE-CCCC---------------------------------------CEEEEEe-CCCcEEEE
Confidence 32 222222212 333332 2211 1344433 33458888
Q ss_pred EcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEec
Q psy5792 166 KYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDW 244 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~ 244 (377)
++..... +..+. ....+..+++++.+..|+.+. ..+.|...++.......... .-..+..+++.+
T Consensus 169 d~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~--------~~~~v~~~~~s~ 234 (337)
T 1gxr_A 169 DLHNQTL-----VRQFQGHTDGASCIDISNDGTKLWTGG-LDNTVRSWDLREGRQLQQHD--------FTSQIFSLGYCP 234 (337)
T ss_dssp ETTTTEE-----EEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEE--------CSSCEEEEEECT
T ss_pred eCCCCce-----eeeeecccCceEEEEECCCCCEEEEEe-cCCcEEEEECCCCceEeeec--------CCCceEEEEECC
Confidence 8876522 22222 345688999998666666655 57889999987543322222 234578899987
Q ss_pred cCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCc
Q psy5792 245 IAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPI 324 (377)
Q Consensus 245 ~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P 324 (377)
.+..|+.. ...+.|.+.++.......+.. ....+.+++++|...+|+.+.. ...|...++........... -..+
T Consensus 235 ~~~~l~~~-~~~~~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~-~~~v 309 (337)
T 1gxr_A 235 TGEWLAVG-MESSNVEVLHVNKPDKYQLHL-HESCVLSLKFAYCGKWFVSTGK--DNLLNAWRTPYGASIFQSKE-SSSV 309 (337)
T ss_dssp TSSEEEEE-ETTSCEEEEETTSSCEEEECC-CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEEC-SSCE
T ss_pred CCCEEEEE-cCCCcEEEEECCCCCeEEEcC-CccceeEEEECCCCCEEEEecC--CCcEEEEECCCCeEEEEecC-CCcE
Confidence 65555544 445789999998876544433 3556899999997666666553 47888888776554433332 3567
Q ss_pred eEEEEeCCCCEEEEEEeCCCCeEEE
Q psy5792 325 KDITLDRKNKRVYWCYSVGSNVLES 349 (377)
Q Consensus 325 ~glalD~~~~~LYw~d~~~~~~i~~ 349 (377)
..+++.+.+..|+.+.. .+.|..
T Consensus 310 ~~~~~s~~~~~l~~~~~--dg~i~i 332 (337)
T 1gxr_A 310 LSCDISVDDKYIVTGSG--DKKATV 332 (337)
T ss_dssp EEEEECTTSCEEEEEET--TSCEEE
T ss_pred EEEEECCCCCEEEEecC--CCeEEE
Confidence 88888876666655543 444443
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.23 E-value=0.0028 Score=58.09 Aligned_cols=291 Identities=10% Similarity=0.040 Sum_probs=157.2
Q ss_pred cCCccccccCCCCeEEEEeCC---CCcEEEEEcCCc-EEEEEeCCCCCceEEEEEEC----CeEEEEcCCCCceEEEc-C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTL---SHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFYK----GRIIYSDANDGNIRSIN-L 86 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~---~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~~----~~ly~td~~~~~I~~~~-~ 86 (377)
..+.+++..+.++++..+-+. .+.|...++++. ...+...........+++.. +.++++-..++.|...+ .
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 467888999888788766655 788999999877 44332113344567777733 35555555677888888 5
Q ss_pred CCC-ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEE
Q psy5792 87 DGS-NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMG 164 (377)
Q Consensus 87 ~g~-~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~ 164 (377)
+++ ....+..... +..+... +.. | ..++.-++++....+.|+.
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~-~~~-------------------~---------------~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGI-GGL-------------------G---------------IGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEE-SGG-------------------G---------------CC-CCCEEEEEETTSCEEE
T ss_pred CCCccEEEEEecccceEEEeec-ccc-------------------c---------------cCCCccEEEEEeCCCeEEE
Confidence 555 4444443222 3444321 000 0 0011113333333345888
Q ss_pred EEcCCCCceeeEEEEecCC--CCceEEEE----EECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcc
Q psy5792 165 IKYNKNESKVTQVLGPLSK--VSLAAKVD----FHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFT 238 (377)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~--~~~~~~l~----~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~ 238 (377)
.++...... ...+.+..+ ......++ +.+.+..|+ +-...+.|...++.......... .-..+.
T Consensus 144 wd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~--------~~~~v~ 213 (357)
T 3i2n_A 144 WDPRQKDDP-VANMEPVQGENKRDCWTVAFGNAYNQEERVVC-AGYDNGDIKLFDLRNMALRWETN--------IKNGVC 213 (357)
T ss_dssp ECTTSCSSC-SEEECCCTTSCCCCEEEEEEECCCC-CCCEEE-EEETTSEEEEEETTTTEEEEEEE--------CSSCEE
T ss_pred EeCCCCCCc-ceeccccCCCCCCceEEEEEEeccCCCCCEEE-EEccCCeEEEEECccCceeeecC--------CCCceE
Confidence 887655310 112211111 22456666 344444444 44466889989987544322222 234588
Q ss_pred eEEEecc--CCeEEEEcCCCCEEEEEEcCCCeEE-E----EeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC
Q psy5792 239 DIAVDWI--AQNIYWSDPKENVIEVARLTGQYRY-V----LISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 239 ~iavD~~--~~~lYwtd~~~~~I~~~~~~g~~~~-~----l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
.+++.+. .+..+++-...+.|.+.++...... . ...........+++.|....++++-.. ...|...++...
T Consensus 214 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~ 292 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG-AGGLHLWKYEYP 292 (357)
T ss_dssp EEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET-TSEEEEEEEECC
T ss_pred EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC-CCcEEEeecCCC
Confidence 8899873 3445555556678888887643211 1 112345567899999865535555432 355555544321
Q ss_pred C-e----------------EEE--EecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 312 K-Q----------------TIL--AQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 312 ~-~----------------~~l--~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
. . +.+ ....-.....+++.+.+..|.++-. ..+.|...++.
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~-~d~~i~iw~~~ 352 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS-FDQTVRVLIVT 352 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE-TTSEEEEEEEC
T ss_pred cccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec-CCCcEEEEECC
Confidence 1 1 111 1111345677888776666665666 66677666654
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.18 E-value=0.00065 Score=63.63 Aligned_cols=199 Identities=7% Similarity=0.000 Sum_probs=115.1
Q ss_pred EEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCc-eEEEEEECCCCEEEEEE---------------------cCCCc
Q psy5792 151 FILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSL-AAKVDFHAAEDYIYWVD---------------------IDHGT 208 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~-~~~l~~d~~~~~ly~sd---------------------~~~~~ 208 (377)
.|+++..+ ..|+.+++++... ..+........ .....+++.+..+.... .....
T Consensus 94 ~l~~~~~~-~~l~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 94 ALFYVKDG-RNLMRVDLATLEE---NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp EEEEEETT-TEEEEEETTTCCE---EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred EEEEEeCC-CeEEEEECCCCcc---eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 46666643 2488888887644 22332222111 12223355455554322 12257
Q ss_pred EEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEec-cCCeEEEEcCC-----CCEEEEEEcCCCeEEEEeeCCC-CCce
Q psy5792 209 ISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDW-IAQNIYWSDPK-----ENVIEVARLTGQYRYVLISGGV-DQPS 281 (377)
Q Consensus 209 I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~-~~~~lYwtd~~-----~~~I~~~~~~g~~~~~l~~~~~-~~P~ 281 (377)
|+.+++.+...+.+.. .-.....+++.+ .++.|.++... ..+|+..++++...+.+..... ....
T Consensus 170 l~~~d~~~g~~~~l~~--------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQ--------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCT 241 (388)
T ss_dssp EEEEETTTCCEEEEEE--------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEE
T ss_pred EEEEECCCCceEEeec--------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccc
Confidence 8888888666555554 233467888888 67777665433 4589999999877666554321 1345
Q ss_pred eEEEcCCCCeEEEE-ecCCCC--eEEEEecCCCCeEEEEecCC-----CCceEEEEeCCCCEEEEEE--------eCCCC
Q psy5792 282 ALAVDPESGYLFWS-ESGKIP--LIARAGLDGKKQTILAQEII-----MPIKDITLDRKNKRVYWCY--------SVGSN 345 (377)
Q Consensus 282 ~iavdp~~g~lywt-d~g~~~--~I~r~~ldG~~~~~l~~~~~-----~~P~glalD~~~~~LYw~d--------~~~~~ 345 (377)
..+..|....|+++ +..... .|+..++++...+.+....- ..|.++++.+.+++|+++- . ...
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-~~~ 320 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE-NDP 320 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C-CCC
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC-CCC
Confidence 67899987778554 432233 49999998777666544211 1144455655566677653 4 566
Q ss_pred eEEEEEccCCceEEEEe
Q psy5792 346 VLESMDYSGGSKMQLKL 362 (377)
Q Consensus 346 ~i~~~~~~G~~~~~~~~ 362 (377)
.|+.++++++..+.+..
T Consensus 321 ~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEeccCCceEEecc
Confidence 88899988776655543
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.16 E-value=0.0015 Score=70.17 Aligned_cols=155 Identities=15% Similarity=0.154 Sum_probs=105.5
Q ss_pred ceEEEEEE-CCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCC-CcceEEEeccCCeEEEEcCCCCEEE-EE
Q psy5792 186 LAAKVDFH-AAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVD-QFTDIAVDWIAQNIYWSDPKENVIE-VA 262 (377)
Q Consensus 186 ~~~~l~~d-~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~-~p~~iavD~~~~~lYwtd~~~~~I~-~~ 262 (377)
.+..+++. +.+..|.++. .+.|+.++.++.....+. .... .+..+++. .++.|+++.. ..+|+ +.
T Consensus 297 ~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~--------~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~ 364 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVP--------EPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIY 364 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECS--------CCSCEEEEEECSS-SEEEEEEEET-TEEEEEEE
T ss_pred ccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEcc--------CCCcceEEeeeEc-CCCeEEEEEC-CCceEEEE
Confidence 36678888 8777777776 568888887754433222 1222 34445554 3455666554 56888 89
Q ss_pred EcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeC
Q psy5792 263 RLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSV 342 (377)
Q Consensus 263 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~ 342 (377)
++++...+.+. .....+..+++.|...+|+++.. ...|+..++.+...+.+..........+++.+.+++|.++..
T Consensus 365 d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~--~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~- 440 (1045)
T 1k32_A 365 DYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVAND--RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFP- 440 (1045)
T ss_dssp ETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEE-
T ss_pred ECCCCCceEec-CCccceeeeEECCCCCEEEEECC--CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEec-
Confidence 99887665555 44567899999998888888764 468999999876666665443344577899888888888765
Q ss_pred CC---------CeEEEEEccCCc
Q psy5792 343 GS---------NVLESMDYSGGS 356 (377)
Q Consensus 343 ~~---------~~i~~~~~~G~~ 356 (377)
.. ..|...+.+++.
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTTE
T ss_pred CccccccCCCCCeEEEEECCCCc
Confidence 33 478888888654
No 157
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.15 E-value=0.0011 Score=63.69 Aligned_cols=242 Identities=12% Similarity=0.100 Sum_probs=148.9
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCC-----------c-EEEEEeCCCCCceEEEEEE-CCe-EEEEcCCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEV-----------K-VAKVVSMPDAAQVVAAVFY-KGR-IIYSDANDGNI 81 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG-----------~-~~~i~~~~~~~~p~~lav~-~~~-ly~td~~~~~I 81 (377)
+.+..++..+.++.++.+-+..+.|...++.. . ..++. .....+.+|++. .+. ++++-...+.|
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 47888899887677888888889999999864 3 44454 455567888883 233 66666667888
Q ss_pred EEEc-CCCCc-------eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEE
Q psy5792 82 RSIN-LDGSN-------STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFI 152 (377)
Q Consensus 82 ~~~~-~~g~~-------~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l 152 (377)
...+ ..+.. ...+..... +.++.. ++. +..+
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-~p~---------------------------------------~~~~ 246 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW-HLL---------------------------------------HESL 246 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEE-CSS---------------------------------------CTTE
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEE-eCC---------------------------------------CCCE
Confidence 8888 33221 111111111 222222 110 1235
Q ss_pred EEEeCCCCeEEEEEcCCCCc-eeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC-CcEEEEeccccCC
Q psy5792 153 LFSVNSGYDIMGIKYNKNES-KVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT-GRENIIEYVETGD 230 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~-~~~~i~~~~~~~~ 230 (377)
+++....+.|+..++..... +....+ ......+..+++.+.+..++++-...+.|...++... .......
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~------ 318 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE------ 318 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE------
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee------
Confidence 55554555799998875421 001111 1234558899999987778887777889999998752 2222222
Q ss_pred CCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCC--------------eEEEEeeCCCCCceeEEEcCCCCeEEEEe
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQ--------------YRYVLISGGVDQPSALAVDPESGYLFWSE 296 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~--------------~~~~l~~~~~~~P~~iavdp~~g~lywtd 296 (377)
..-..+.+|++.+.++.++.+....++|.+.++... ............++.++++|...+++.+-
T Consensus 319 -~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 319 -SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp -CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEE
T ss_pred -cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEE
Confidence 234568899999877788888888888998888651 22222233355689999999766466665
Q ss_pred cCCCCeEEEEecC
Q psy5792 297 SGKIPLIARAGLD 309 (377)
Q Consensus 297 ~g~~~~I~r~~ld 309 (377)
.. .+.|...+++
T Consensus 398 s~-dg~i~iw~~~ 409 (430)
T 2xyi_A 398 SE-DNIMQVWQMA 409 (430)
T ss_dssp ET-TSEEEEEEEC
T ss_pred EC-CCCEEEeEcc
Confidence 42 4555554443
No 158
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.14 E-value=0.00014 Score=66.64 Aligned_cols=259 Identities=13% Similarity=0.131 Sum_probs=142.8
Q ss_pred CccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEcCCCCceEEEec
Q psy5792 18 VASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSINLDGSNSTVLRN 96 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~g~~~~~~~~ 96 (377)
+.++++|. ++.||+.... |..+|.+|. ..... .........++.++.||+... .+.|..++.+|+..-....
T Consensus 62 ~~~~~~~~-~g~l~v~t~~---l~~~d~~g~~~~~~~--~~~~~~~~~~~~~~~l~v~t~-~~~l~~~d~~g~~~~~~~~ 134 (330)
T 3hxj_A 62 ECRPSIGK-DGTIYFGSDK---VYAINPDGTEKWRFD--TKKAIVSDFTIFEDILYVTSM-DGHLYAINTDGTEKWRFKT 134 (330)
T ss_dssp EECCEETT-TTEECCSSCE---EEEECCCGGGGGGSC--C-----CCEEEETTEEEEECT-TSEEEEECTTSCEEEEEEC
T ss_pred ccceEEec-CCcEEEecCc---EEEECCCCcEEEEEE--CCCCcccCceEECCEEEEEec-CCEEEEEcCCCCEEEEEcC
Confidence 35666665 4567664332 889998887 43321 111111223456889988753 4679999855654333221
Q ss_pred CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceee
Q psy5792 97 NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVT 175 (377)
Q Consensus 97 ~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~ 175 (377)
... ...+.+ ..+..++++..+ +.|..++.++. .
T Consensus 135 ~~~~~~~~~~-----------------------------------------~~~g~l~vgt~~-~~l~~~d~~g~-~--- 168 (330)
T 3hxj_A 135 KKAIYATPIV-----------------------------------------SEDGTIYVGSND-NYLYAINPDGT-E--- 168 (330)
T ss_dssp SSCCCSCCEE-----------------------------------------CTTSCEEEECTT-SEEEEECTTSC-E---
T ss_pred CCceeeeeEE-----------------------------------------cCCCEEEEEcCC-CEEEEECCCCC-E---
Confidence 111 111111 011235555432 23777777632 1
Q ss_pred EEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC
Q psy5792 176 QVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~ 255 (377)
....... ......+.+|. ++.||++. +.|++++.+|....... .....+.++++|. .++||++..
T Consensus 169 ~~~~~~~-~~~~~~~~~d~-~g~l~v~t---~~l~~~d~~g~~~~~~~--------~~~~~~~~~~~~~-~g~l~v~t~- 233 (330)
T 3hxj_A 169 KWRFKTN-DAITSAASIGK-DGTIYFGS---DKVYAINPDGTEKWNFY--------AGYWTVTRPAISE-DGTIYVTSL- 233 (330)
T ss_dssp EEEEECS-SCCCSCCEECT-TCCEEEES---SSEEEECTTSCEEEEEC--------CSSCCCSCCEECT-TSCEEEEET-
T ss_pred eEEEecC-CCceeeeEEcC-CCEEEEEe---CEEEEECCCCcEEEEEc--------cCCcceeceEECC-CCeEEEEcC-
Confidence 1112211 12233445554 67788876 78998886553322222 1224577889984 568888765
Q ss_pred CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCE
Q psy5792 256 ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKR 335 (377)
Q Consensus 256 ~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~ 335 (377)
.+.|.+.+.+|......-. ....+..+++|+ ++.||++.. ...|.+.+.+|......... -.....+.+| .+++
T Consensus 234 ~~gl~~~~~~g~~~~~~~~-~~~~~~~~~~~~-~g~l~v~t~--~ggl~~~d~~g~~~~~~~~~-~~~~~~~~~d-~~g~ 307 (330)
T 3hxj_A 234 DGHLYAINPDGTEKWRFKT-GKRIESSPVIGN-TDTIYFGSY--DGHLYAINPDGTEKWNFETG-SWIIATPVID-ENGT 307 (330)
T ss_dssp TTEEEEECTTSCEEEEEEC-SSCCCSCCEECT-TSCEEEECT--TCEEEEECTTSCEEEEEECS-SCCCSCCEEC-TTCC
T ss_pred CCeEEEECCCCCEeEEeeC-CCCccccceEcC-CCeEEEecC--CCCEEEECCCCcEEEEEEcC-CccccceEEc-CCCE
Confidence 3578888887776544332 233456678874 789999874 35899998766554443322 2345567777 4677
Q ss_pred EEEEEeCCCCeEEEEEc
Q psy5792 336 VYWCYSVGSNVLESMDY 352 (377)
Q Consensus 336 LYw~d~~~~~~i~~~~~ 352 (377)
||+... .+.+.....
T Consensus 308 l~~gt~--~G~~~~~~~ 322 (330)
T 3hxj_A 308 IYFGTR--NGKFYALFN 322 (330)
T ss_dssp EEEECT--TSCEEEEEC
T ss_pred EEEEcC--CCeEEEEec
Confidence 887654 445544433
No 159
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.14 E-value=0.0021 Score=60.03 Aligned_cols=238 Identities=12% Similarity=0.028 Sum_probs=140.7
Q ss_pred CccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEE--eCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 18 VASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVV--SMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~--~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
+.+++..++ ++| .+-+..+.|+.-|++.. ..+.. ...+......|++ .++....+-..++.|...+ .+|+..
T Consensus 85 v~~~~~s~d-~~l-~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 85 VADLTWVGE-RGI-LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp EEEEEEETT-TEE-EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEeCC-CeE-EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 455666654 344 35566788888887654 32221 1134455788888 4455556656677888888 667666
Q ss_pred EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 92 TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 92 ~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
..+..... +..+.+ +++. ..++++....+.|+..++...
T Consensus 163 ~~~~~h~~~V~~~~~-~~~~---------------------------------------~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAA-SPHK---------------------------------------DSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EEECCCSSCEEEEEE-CSSC---------------------------------------TTEEEEEETTSCEEEEETTSS
T ss_pred EEEcCcCCceEEEEe-cCCC---------------------------------------CCceeeecccccccccccccc
Confidence 66654333 444443 2211 124444444445888887655
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
.. ...+........+.++++.+.+++++.+-..++.|...++.......... .....+.+|++.+.+.++.
T Consensus 203 ~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 203 KP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-------VHSQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp SC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-------CCSSCEEEEEECSSSSCCE
T ss_pred ce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-------CCCCCEEEEEEccCCCeEE
Confidence 33 11111112233477899988778887776677889888886433222222 2344578999987666666
Q ss_pred EEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 251 WSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 251 wtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
.+-...++|.+.++.......+ ........++++.|.+..|+.+-.. ...|..-++
T Consensus 274 asgs~D~~i~vwd~~~~~~~~~-~~H~~~V~~v~~sp~~~~llas~s~-D~~v~~w~v 329 (344)
T 4gqb_B 274 ASLSEDCSLAVLDSSLSELFRS-QAHRDFVRDATWSPLNHSLLTTVGW-DHQVVHHVV 329 (344)
T ss_dssp EEEETTSCEEEECTTCCEEEEE-CCCSSCEEEEEECSSSTTEEEEEET-TSCEEEEEC
T ss_pred EEEeCCCeEEEEECCCCcEEEE-cCCCCCEEEEEEeCCCCeEEEEEcC-CCeEEEEEC
Confidence 6766677899988877654433 2334567899999977777765422 345544444
No 160
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.0057 Score=57.27 Aligned_cols=282 Identities=11% Similarity=0.026 Sum_probs=157.8
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEc----CCc-E-----EEE-EeCC---------CCCceEEEEE-ECCeEEEE
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNI----EVK-V-----AKV-VSMP---------DAAQVVAAVF-YKGRIIYS 74 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~----dG~-~-----~~i-~~~~---------~~~~p~~lav-~~~~ly~t 74 (377)
+.+.++++.+.++.+..+-...+.|...++ ... . ... +... .......+++ .++.++++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 578899999987724444455688888888 543 2 111 1111 1225677888 33344444
Q ss_pred cCCCCceEEEcCCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEE
Q psy5792 75 DANDGNIRSINLDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFIL 153 (377)
Q Consensus 75 d~~~~~I~~~~~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~ 153 (377)
-..++.|...+.+++....+..... +..+.+ +++.. +|+
T Consensus 126 ~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~-~~~~~---------------------------------------~l~ 165 (425)
T 1r5m_A 126 GVENGELRLWNKTGALLNVLNFHRAPIVSVKW-NKDGT---------------------------------------HII 165 (425)
T ss_dssp EETTSCEEEEETTSCEEEEECCCCSCEEEEEE-CTTSS---------------------------------------EEE
T ss_pred EeCCCeEEEEeCCCCeeeeccCCCccEEEEEE-CCCCC---------------------------------------EEE
Confidence 4456778888866766665553333 444443 22211 233
Q ss_pred EEeCCCCeEEEEEcCCCCceeeEEEEecCCC--------------CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc
Q psy5792 154 FSVNSGYDIMGIKYNKNESKVTQVLGPLSKV--------------SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR 219 (377)
Q Consensus 154 ~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~--------------~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~ 219 (377)
.+.. .+.|+..++..... .. ....... ..+..+++.+ ++.++ +-...+.|...++.....
T Consensus 166 ~~~~-d~~i~iwd~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~g~i~~~d~~~~~~ 239 (425)
T 1r5m_A 166 SMDV-ENVTILWNVISGTV--MQ-HFELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFV-IPGPKGAIFVYQITEKTP 239 (425)
T ss_dssp EEET-TCCEEEEETTTTEE--EE-EECCC---------------CCCBSCCEEEE-TTEEE-EECGGGCEEEEETTCSSC
T ss_pred EEec-CCeEEEEECCCCcE--EE-EeeccccCccceeeccccCCcceeeEEEEcC-CCEEE-EEcCCCeEEEEEcCCCce
Confidence 3332 23477777654422 11 1111100 0145566665 35544 444567888888875443
Q ss_pred EEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCC
Q psy5792 220 ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGK 299 (377)
Q Consensus 220 ~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~ 299 (377)
..... .....+..+++.+.+. ++++-...+.|.+.++........+.........+++.|.. .++... .
T Consensus 240 ~~~~~-------~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~ 308 (425)
T 1r5m_A 240 TGKLI-------GHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS--M 308 (425)
T ss_dssp SEEEC-------CCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE--T
T ss_pred eeeec-------cCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEe--C
Confidence 33333 2344578899997555 44555556789999887654333333345567899999854 444443 2
Q ss_pred CCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 300 IPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 300 ~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
...|...++............-..+..+++.+.+..|+.+ . ..+.|...++....
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~-~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVA-F-MDGQVNVYDLKKLN 363 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEE-E-TTSCEEEEECHHHH
T ss_pred CCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEE-E-CCCeEEEEECCCCc
Confidence 5788888886544433333323567889998665555544 4 56778888876443
No 161
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.13 E-value=0.0052 Score=56.46 Aligned_cols=274 Identities=9% Similarity=-0.018 Sum_probs=154.3
Q ss_pred CCccccccCC---CCeEEEEeCCCCcEEEEEcCCc-EEEE-EeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCC
Q psy5792 17 AVASTLKPQS---GPFVYGVKTLSHSLHYVNIEVK-VAKV-VSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGS 89 (377)
Q Consensus 17 ~~~~~~~d~~---~~~ly~~d~~~~~I~~~~~dG~-~~~i-~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~ 89 (377)
.+.+++..+. ++.+..+-+..+.|..-+++.. .... ...........+++ ..+.+..+-..++.|...+ .+|+
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~ 113 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK 113 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 4555665442 2345556666677777776554 2221 11234445677777 4455666666677888888 6666
Q ss_pred ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 90 NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 90 ~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
....+..... +..+.+ +|+. ..+++....+.|+..++.
T Consensus 114 ~~~~~~~~~~~~~~~~~-spdg----------------------------------------~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 114 QIKSIDAGPVDAWTLAF-SPDS----------------------------------------QYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEEEEECCTTCCCCEEE-CTTS----------------------------------------SEEEEECTTSEEEEEETT
T ss_pred EEEEEeCCCccEEEEEE-CCCC----------------------------------------CEEEEEcCCCcEEEEEcC
Confidence 5555543222 222322 2221 234444445568888887
Q ss_pred CCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 169 KNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
.... .. .+ ......+.++++.+.+..|.... ..+.|...++.......... .....+..+++.+. +.
T Consensus 153 ~~~~--~~-~~-~~~~~~v~~~~~spdg~~lasg~-~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~spd-~~ 219 (321)
T 3ow8_A 153 SGKK--EY-SL-DTRGKFILSIAYSPDGKYLASGA-IDGIINIFDIATGKLLHTLE-------GHAMPIRSLTFSPD-SQ 219 (321)
T ss_dssp TCSE--EE-EE-ECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEEC-------CCSSCCCEEEECTT-SC
T ss_pred CCce--eE-Ee-cCCCceEEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEc-------ccCCceeEEEEcCC-CC
Confidence 6533 11 11 12234578899998776666554 56788888886433222222 22345789999975 44
Q ss_pred EEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEE
Q psy5792 249 IYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDIT 328 (377)
Q Consensus 249 lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~gla 328 (377)
+..+-...+.|.+.++........+.........+++.|...+|+-+.. ...|...++........+...-....+++
T Consensus 220 ~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~h~~~v~~v~ 297 (321)
T 3ow8_A 220 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS--DKSVKVWDVGTRTCVHTFFDHQDQVWGVK 297 (321)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCEEEEEEcCCCCcEEEEE
Confidence 5566666788999998766544444444556789999996666655543 45677777654332222222234567788
Q ss_pred EeCCCCEEEEEEeCCCCeEE
Q psy5792 329 LDRKNKRVYWCYSVGSNVLE 348 (377)
Q Consensus 329 lD~~~~~LYw~d~~~~~~i~ 348 (377)
+.+.+..|.-+ . ..++|.
T Consensus 298 ~s~~g~~l~s~-~-~d~~i~ 315 (321)
T 3ow8_A 298 YNGNGSKIVSV-G-DDQEIH 315 (321)
T ss_dssp ECTTSSEEEEE-E-TTCCEE
T ss_pred ECCCCCEEEEE-e-CCCeEE
Confidence 87554444433 3 344443
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.11 E-value=0.00027 Score=70.68 Aligned_cols=269 Identities=9% Similarity=-0.056 Sum_probs=152.1
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCC-CceEEEEEECC-eEEEEcC--CCC--ceEEEcC--C
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDA-AQVVAAVFYKG-RIIYSDA--NDG--NIRSINL--D 87 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~-~~p~~lav~~~-~ly~td~--~~~--~I~~~~~--~ 87 (377)
.+.+++..+++++|.++....+.+...+++|. .+++. ... ....++++..| .+|+++. ... .|+.++. +
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt--~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLN--REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECC--SSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTST
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeee--cccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCC
Confidence 35677888888899887665666766667888 76664 222 34555666333 5666765 222 5666775 6
Q ss_pred CCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEc
Q psy5792 88 GSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKY 167 (377)
Q Consensus 88 g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l 167 (377)
|... .+....+.... ..+++.+ ..++.+.... .+...++
T Consensus 101 g~~~-~l~~~~~~~~~-~~s~dg~--------------------------------------~~~~~s~~~~-~~~l~d~ 139 (582)
T 3o4h_A 101 GEEQ-RLEAVKPMRIL-SGVDTGE--------------------------------------AVVFTGATED-RVALYAL 139 (582)
T ss_dssp TCCE-ECTTSCSBEEE-EEEECSS--------------------------------------CEEEEEECSS-CEEEEEE
T ss_pred Cccc-cccCCCCceee-eeCCCCC--------------------------------------eEEEEecCCC-CceEEEc
Confidence 6554 22221112211 2233221 1233333222 2445566
Q ss_pred CCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC---CCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEec
Q psy5792 168 NKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID---HGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDW 244 (377)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~---~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~ 244 (377)
++... ..+..... ..+++++.+..|+++... ...|+.+++++...+.+.. .......+++.+
T Consensus 140 ~~g~~---~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~--------~~~~~~~~~~Sp 204 (582)
T 3o4h_A 140 DGGGL---RELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS--------GEGSFSSASISP 204 (582)
T ss_dssp ETTEE---EEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC--------SSCEEEEEEECT
T ss_pred cCCcE---EEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec--------CCCccccceECC
Confidence 55432 12221111 567777878999876532 1579999988766665543 344567889988
Q ss_pred cCCeEEEEcCCC-CEEEEEEcCCCeEEEEeeCCCCCceeEE--------EcCCCCeEEEEecCCCCeEEEEecCCCCeEE
Q psy5792 245 IAQNIYWSDPKE-NVIEVARLTGQYRYVLISGGVDQPSALA--------VDPESGYLFWSESGKIPLIARAGLDGKKQTI 315 (377)
Q Consensus 245 ~~~~lYwtd~~~-~~I~~~~~~g~~~~~l~~~~~~~P~~ia--------vdp~~g~lywtd~g~~~~I~r~~ldG~~~~~ 315 (377)
.++.|+.++... .+|++.++++...+ ++......+.+++ ++|.. .+|++-.. ..++....+ |+..+
T Consensus 205 DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~-~g~~~l~~~-g~~~~- 279 (582)
T 3o4h_A 205 GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARR-EGRSAVFID-GERVE- 279 (582)
T ss_dssp TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEE-TTEEEEEET-TEEEC-
T ss_pred CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEc-CCcEEEEEE-CCeec-
Confidence 888888544432 38999999987766 5544333455566 89865 77776542 345555555 43221
Q ss_pred EEecCCCCceEEEEeCCCCEEEEEEeCCC---CeEEEEEccC
Q psy5792 316 LAQEIIMPIKDITLDRKNKRVYWCYSVGS---NVLESMDYSG 354 (377)
Q Consensus 316 l~~~~~~~P~glalD~~~~~LYw~d~~~~---~~i~~~~~~G 354 (377)
.......++++. +++++++-. .. ..++.++.++
T Consensus 280 ---~~~~~v~~~~~s--dg~~l~~~s-~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 280 ---APQGNHGRVVLW--RGKLVTSHT-SLSTPPRIVSLPSGE 315 (582)
T ss_dssp ---CCSSEEEEEEEE--TTEEEEEEE-ETTEEEEEEEETTCC
T ss_pred ---cCCCceEEEEec--CCEEEEEEc-CCCCCCeEEEEcCCC
Confidence 112345567776 455555433 22 4566666654
No 163
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0025 Score=61.35 Aligned_cols=232 Identities=10% Similarity=0.006 Sum_probs=133.4
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcC--Cc--EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCC
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIE--VK--VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGS 89 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~d--G~--~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~ 89 (377)
.+.++++.+.+.+|+.+-...+.|...+++ +. .+.+........+.++++ .+..|+.++. .+.|..++ .+++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCcc
Confidence 678999999988888888788989999887 44 555531123456788888 3446666654 67788887 5554
Q ss_pred ceE----EEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEE
Q psy5792 90 NST----VLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMG 164 (377)
Q Consensus 90 ~~~----~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~ 164 (377)
... .+..... +..+.+ +++.. ...+|+.+. ..+.|+.
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~-sp~~~------------------------------------~~~~l~s~~-~d~~i~v 224 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHL-IKDSD------------------------------------GHQFIITSD-RDEHIKI 224 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEE-EECTT------------------------------------SCEEEEEEE-TTSCEEE
T ss_pred cccccceeeecccCceEEEEE-cCCCC------------------------------------CCcEEEEEc-CCCcEEE
Confidence 321 2211112 333332 22200 011344443 3346888
Q ss_pred EEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecccc--C-------------
Q psy5792 165 IKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVET--G------------- 229 (377)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~--~------------- 229 (377)
.++..... ... ........+..+++. .+..|+... ..+.|...++........+..... .
T Consensus 225 wd~~~~~~--~~~-~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 225 SHYPQCFI--VDK-WLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp EEESCTTC--EEE-ECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred EECCCCce--eee-eecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence 88865533 111 111233557888888 566666554 678888888864432222210000 0
Q ss_pred ---CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEc--CCC---eEEEEeeCCCCCceeEEEcCCCCeEEEE
Q psy5792 230 ---DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARL--TGQ---YRYVLISGGVDQPSALAVDPESGYLFWS 295 (377)
Q Consensus 230 ---~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~--~g~---~~~~l~~~~~~~P~~iavdp~~g~lywt 295 (377)
....-..+.+|++.+.++.||.+....+.|.+.++ ... .....+... ..+.+++++| ++ ++.+
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~-~~v~ 370 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN-DE-FQVT 370 (450)
T ss_dssp -----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET-TE-EEEE
T ss_pred ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC-Cc-EEEE
Confidence 00001236678888777788888767788999888 322 222223333 6789999998 44 4554
No 164
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.08 E-value=0.0068 Score=58.02 Aligned_cols=193 Identities=9% Similarity=0.120 Sum_probs=121.2
Q ss_pred EEEEeCCCCeEEEEEcCCCCc--eeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC---CcEEEEec
Q psy5792 152 ILFSVNSGYDIMGIKYNKNES--KVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT---GRENIIEY 225 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~--~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~---~~~~i~~~ 225 (377)
++++....|.|+..++..... ........+ .....+..+++.+.++.++.+....+.|...++... .......
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~- 274 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD- 274 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-
Confidence 445555555688888875321 000001111 233458899999877888888878899999998743 1222222
Q ss_pred cccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC-CeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5792 226 VETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG-QYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIA 304 (377)
Q Consensus 226 ~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g-~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~ 304 (377)
..-..+..|++.+.+.+++++-...+.|.+.++.. ......+........+++++|.+..++.+-.. ..+|.
T Consensus 275 ------~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~-d~~i~ 347 (430)
T 2xyi_A 275 ------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLH 347 (430)
T ss_dssp ------CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET-TSCCE
T ss_pred ------cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC-CCcEE
Confidence 23345889999987777888888889999999976 22222233335567999999977777777643 35555
Q ss_pred EEecCC--C-----------CeEEEEec-CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 305 RAGLDG--K-----------KQTILAQE-IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 305 r~~ldG--~-----------~~~~l~~~-~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
..++.. . ........ .-..+..+++.+....++.+-. ..+.|...+++
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s-~dg~i~iw~~~ 409 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS-EDNIMQVWQMA 409 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE-TTSEEEEEEEC
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE-CCCCEEEeEcc
Confidence 555543 1 12222221 1345889999876654777766 77777766665
No 165
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.04 E-value=0.00057 Score=64.06 Aligned_cols=240 Identities=13% Similarity=0.064 Sum_probs=132.4
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EE---EEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VA---KVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~---~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
.+.+++..+++ ++. +-+..+.|..-|+... .. .+...........|++ .++...++-..++.|...+ .+++.
T Consensus 96 ~V~~~~~s~d~-~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 96 GVTDVAWVSEK-GIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV 173 (357)
T ss_dssp CEEEEEEETTT-EEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEEcCCC-CEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 35566666654 332 3445667777665443 11 1111123345678888 3445555555667888888 56655
Q ss_pred eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCC
Q psy5792 91 STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNK 169 (377)
Q Consensus 91 ~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~ 169 (377)
...+..... +..+++ +++. ..++++....+.|+..++..
T Consensus 174 ~~~~~~h~~~v~~v~~-s~~~---------------------------------------~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 174 LKSYNAHSSEVNCVAA-CPGK---------------------------------------DTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp EEEECCCSSCEEEEEE-CTTC---------------------------------------SSCEEEEETTSCEEECCTTS
T ss_pred EEEEcCCCCCEEEEEE-ccCC---------------------------------------CceeeeeccCCceEEEECCC
Confidence 555543333 444443 2211 11333333333477776654
Q ss_pred CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeE
Q psy5792 170 NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNI 249 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~l 249 (377)
... ...+........+..+++.+.++.++.+-...+.|...++.......... .....+.+|++.+.++++
T Consensus 214 ~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~-------~~~~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 214 PKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA-------VHSQNITGLAYSYHSSPF 284 (357)
T ss_dssp SSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC-------CCSSCEEEEEECSSSSCC
T ss_pred Cce--eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe-------ccceeEEEEEEcCCCCCE
Confidence 432 11111112233478899988777777665567888888886433333332 234457889998766666
Q ss_pred EEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 250 YWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 250 Ywtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
..+-...++|.+.+++......... .....+++++.|..+.++.+-.. ...|..-++.
T Consensus 285 lasgs~D~~i~iwd~~~~~~~~~~~-H~~~V~~vafsP~d~~~l~s~s~-Dg~v~iW~~~ 342 (357)
T 4g56_B 285 LASISEDCTVAVLDADFSEVFRDLS-HRDFVTGVAWSPLDHSKFTTVGW-DHKVLHHHLP 342 (357)
T ss_dssp EEEEETTSCEEEECTTSCEEEEECC-CSSCEEEEEECSSSTTEEEEEET-TSCEEEEECC
T ss_pred EEEEeCCCEEEEEECCCCcEeEECC-CCCCEEEEEEeCCCCCEEEEEcC-CCeEEEEECC
Confidence 6666666789999988765433332 34557899999876666665432 3555555543
No 166
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.03 E-value=0.01 Score=56.40 Aligned_cols=261 Identities=9% Similarity=0.022 Sum_probs=151.6
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNST 92 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~ 92 (377)
.+..+++.+... +..+-+..+.|...|+... .+++. ........+++ .++.+..+-..++.|...+ .+++...
T Consensus 110 ~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~--~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp CEEEEEECSSSS-EEEEEESSSCEEEEETTTCCCCEEEC--CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred cEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEEe--ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 566777877654 4455566788999998765 55553 44556788888 4555666666677888888 4444444
Q ss_pred EEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 93 VLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 93 ~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
.+..... +..+.+ +++. . .+++....+.|+..++....
T Consensus 187 ~~~~h~~~V~~v~~-~p~~---------------------------------------~-~l~s~s~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 187 TMHGHDHNVSSVSI-MPNG---------------------------------------D-HIVSASRDKTIKMWEVQTGY 225 (410)
T ss_dssp CCCCCSSCEEEEEE-CSSS---------------------------------------S-EEEEEETTSEEEEEETTTCC
T ss_pred EEcCCCCCEEEEEE-eCCC---------------------------------------C-EEEEEeCCCeEEEEECCCCc
Confidence 3332222 333332 2221 1 33333334468888876543
Q ss_pred ceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC-----
Q psy5792 172 SKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA----- 246 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~----- 246 (377)
. ...+ ......+..+++.+.+ .++.+-...+.|...++.......... ..-..+..+++.+..
T Consensus 226 ~--~~~~--~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 226 C--VKTF--TGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELR-------EHRHVVECISWAPESSYSSI 293 (410)
T ss_dssp E--EEEE--ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECCSCGGGGG
T ss_pred E--EEEE--eCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEec-------CCCceEEEEEEcCcccccch
Confidence 2 1111 1223346777887744 445555567888888886544333332 233346677776532
Q ss_pred --------------CeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC
Q psy5792 247 --------------QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK 312 (377)
Q Consensus 247 --------------~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~ 312 (377)
+.+.++-...+.|...++........+.......++++++|...+|+-+.. ...|...++....
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD--DKTLRVWDYKNKR 371 (410)
T ss_dssp GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEET--TTEEEEECCTTSC
T ss_pred hhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCc
Confidence 456677777789999998766544334444556789999996666665543 4677777775433
Q ss_pred -eEEEEecCCCCceEEEEeCCCCEE
Q psy5792 313 -QTILAQEIIMPIKDITLDRKNKRV 336 (377)
Q Consensus 313 -~~~l~~~~~~~P~glalD~~~~~L 336 (377)
...+.. .-....++++.+....|
T Consensus 372 ~~~~~~~-h~~~v~~l~~~~~~~~l 395 (410)
T 1vyh_C 372 CMKTLNA-HEHFVTSLDFHKTAPYV 395 (410)
T ss_dssp CCEEEEC-CSSCEEEEEECSSSSCE
T ss_pred eEEEEcC-CCCcEEEEEEcCCCCEE
Confidence 333322 23456778876544333
No 167
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.95 E-value=0.0035 Score=64.05 Aligned_cols=284 Identities=9% Similarity=0.051 Sum_probs=154.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCC--ceEEEEE--ECCeEEEEcCC--------CCceE
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAA--QVVAAVF--YKGRIIYSDAN--------DGNIR 82 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~--~p~~lav--~~~~ly~td~~--------~~~I~ 82 (377)
..+.+++..+++..+|- +..+.|...++++. .+.++...... .+.++++ .+.+|.++... ...|+
T Consensus 17 ~~~~~~~~spdg~~~~~--~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR--EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC--CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE--eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 35777888887775532 56678999999877 55555221111 3677888 45566666332 14566
Q ss_pred EEc-CCCCceEEEecCCC----ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeC
Q psy5792 83 SIN-LDGSNSTVLRNNAG----ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVN 157 (377)
Q Consensus 83 ~~~-~~g~~~~~~~~~~~----p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~ 157 (377)
..+ .+|+. +.+..... +..+. ++|+ ...|.++..
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~-~SPd---------------------------------------G~~la~~~~ 133 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAG-WGPK---------------------------------------GQQLIFIFE 133 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCC-BCSS---------------------------------------TTCEEEEET
T ss_pred EEECCCCce-EeccCCccccccccccE-ECCC---------------------------------------CCEEEEEEC
Confidence 666 33432 22221100 00010 1111 124656555
Q ss_pred CCCeEEEEEcCCCCceeeEEEEecCC-----------------CCceEEEEEECCCCEEEEEEcCC--------------
Q psy5792 158 SGYDIMGIKYNKNESKVTQVLGPLSK-----------------VSLAAKVDFHAAEDYIYWVDIDH-------------- 206 (377)
Q Consensus 158 ~~~~I~~~~l~~~~~~~~~~~~~~~~-----------------~~~~~~l~~d~~~~~ly~sd~~~-------------- 206 (377)
.. |+.+++++... ..+..... .....++++.+.+++|.++....
T Consensus 134 ~~--i~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 134 NN--IYYCAHVGKQA---IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp TE--EEEESSSSSCC---EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred Ce--EEEEECCCCce---EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 44 88888876543 11211100 11336788988888888775322
Q ss_pred -------------------CcEEEEEcCCCCcEEEEeccccCCCCC------CCCcceEEEeccCCeEE-EEcCC--CCE
Q psy5792 207 -------------------GTISRTHRDGTGRENIIEYVETGDPTP------VDQFTDIAVDWIAQNIY-WSDPK--ENV 258 (377)
Q Consensus 207 -------------------~~I~~~~~~G~~~~~i~~~~~~~~~~~------~~~p~~iavD~~~~~lY-wtd~~--~~~ 258 (377)
..|+..++++......+. .. ......+++.+.++.|+ +++.. ...
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 281 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM-------PPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSI 281 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC-------CCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEE
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee-------CCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEE
Confidence 145566665433211111 11 11244577776555553 33432 347
Q ss_pred EEEEEcCCCeEEEEeeC---CCCC--ceeEEEcCCCCeEEEE-ecCC-----CCeEEEEe-cCCCC---eEEEEecCCCC
Q psy5792 259 IEVARLTGQYRYVLISG---GVDQ--PSALAVDPESGYLFWS-ESGK-----IPLIARAG-LDGKK---QTILAQEIIMP 323 (377)
Q Consensus 259 I~~~~~~g~~~~~l~~~---~~~~--P~~iavdp~~g~lywt-d~g~-----~~~I~r~~-ldG~~---~~~l~~~~~~~ 323 (377)
|.+.++++.....+... .... +..++..|.+..|+++ .... ..+|+..+ .++.. .+.+.......
T Consensus 282 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 361 (723)
T 1xfd_A 282 LTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV 361 (723)
T ss_dssp EEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE
T ss_pred EEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE
Confidence 88889887655544332 1111 2478999988878875 3221 23688888 56655 44444322222
Q ss_pred ceEEEEeCCCCEEEEEEeCC----CCeEEEEEccCC
Q psy5792 324 IKDITLDRKNKRVYWCYSVG----SNVLESMDYSGG 355 (377)
Q Consensus 324 P~glalD~~~~~LYw~d~~~----~~~i~~~~~~G~ 355 (377)
...+++++.+++||++.. . ...|+.++.+|+
T Consensus 362 ~~~~~~spdg~~l~~~~~-~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 362 TKILAYDEKGNKIYFLST-EDLPRRRQLYSANTVGN 396 (723)
T ss_dssp EEEEEEETTTTEEEEEES-SSCTTCCEEEEECSSTT
T ss_pred EeeeEEcCCCCEEEEEEc-CCCCcceEEEEEeCCCC
Confidence 223689999999998865 3 356888887765
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.94 E-value=0.013 Score=54.57 Aligned_cols=282 Identities=9% Similarity=-0.033 Sum_probs=160.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--------EEEEEeCCCCCceEEEEEE-C----C---eEEEEcCCCC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--------VAKVVSMPDAAQVVAAVFY-K----G---RIIYSDANDG 79 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--------~~~i~~~~~~~~p~~lav~-~----~---~ly~td~~~~ 79 (377)
+.+.+++.++ .++++-+..+.|...+++.. ...+. ........+++. + + .++++-..++
T Consensus 17 ~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg 91 (397)
T 1sq9_A 17 ADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF--VHKSGLHHVDVLQAIERDAFELCLVATTSFSG 91 (397)
T ss_dssp SCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE--CCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred cCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEe--cCCCcEEEEEEecccccCCccccEEEEEcCCC
Confidence 4667788766 45556666788888887653 33343 444556788883 3 4 5555555667
Q ss_pred ceEEEc-CCCCc-----eEEEecC-----CC-ceeEEeee---cCCCCcccCCCcCCCCCCceeccccCCCccccCCcCC
Q psy5792 80 NIRSIN-LDGSN-----STVLRNN-----AG-ISDFILFS---VNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDF 144 (377)
Q Consensus 80 ~I~~~~-~~g~~-----~~~~~~~-----~~-p~~i~v~~---~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~ 144 (377)
.|...+ .+++. ...+... .. +..+.+.. ++.
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---------------------------------- 137 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL---------------------------------- 137 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--------------------------------------
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC----------------------------------
Confidence 888888 45543 4444322 12 44444320 111
Q ss_pred CcCCCcEEEEEeCCCCeEEEEEcCC------CCc-ee--eEEEEe-----cCCCCceEEEEEECCCCEEEEEEcCCCcEE
Q psy5792 145 HAGISDFILFSVNSGYDIMGIKYNK------NES-KV--TQVLGP-----LSKVSLAAKVDFHAAEDYIYWVDIDHGTIS 210 (377)
Q Consensus 145 C~~~~~~l~~s~~~~~~I~~~~l~~------~~~-~~--~~~~~~-----~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~ 210 (377)
..++++....|.|+..++.. ... .+ ...+.. ......+..+++.+.+ ++++-...+.|.
T Consensus 138 -----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~ 210 (397)
T 1sq9_A 138 -----SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQ 210 (397)
T ss_dssp -----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEE
T ss_pred -----ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEE
Confidence 23133333334577777765 221 00 001110 1224457889999855 555555778999
Q ss_pred EEEcCCCCcEEEEeccccCCCC---C---CCCcceEEEeccCCeEEEEcCCC---CEEEEEEcCCCeEEEEeeC------
Q psy5792 211 RTHRDGTGRENIIEYVETGDPT---P---VDQFTDIAVDWIAQNIYWSDPKE---NVIEVARLTGQYRYVLISG------ 275 (377)
Q Consensus 211 ~~~~~G~~~~~i~~~~~~~~~~---~---~~~p~~iavD~~~~~lYwtd~~~---~~I~~~~~~g~~~~~l~~~------ 275 (377)
..++........+. . . -..+..+++++....| ++-... +.|.+.++........+..
T Consensus 211 i~d~~~~~~~~~~~-------~~~~h~~~~~~i~~i~~~~~~~~l-~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~ 282 (397)
T 1sq9_A 211 ISELSTLRPLYNFE-------SQHSMINNSNSIRSVKFSPQGSLL-AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ 282 (397)
T ss_dssp EEETTTTEEEEEEE-------CCC---CCCCCEEEEEECSSTTEE-EEEEEETTEEEEEEEETTTCCEEEEECBC-----
T ss_pred EEECCCCceeEEEe-------ccccccccCCccceEEECCCCCEE-EEEecCCCCceEEEEECCCCcccceeccCccccc
Confidence 99987433323333 2 2 4458899998755444 454444 7899999875543333332
Q ss_pred -------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEe------cC---------------CCCceEE
Q psy5792 276 -------GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQ------EI---------------IMPIKDI 327 (377)
Q Consensus 276 -------~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~------~~---------------~~~P~gl 327 (377)
.......++++|...+|+.... ...|...++........+. .. -.....+
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~ 360 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAGW--DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV 360 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEET--TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEeC--CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEE
Confidence 3455789999997666666553 4688888876544333333 11 2456788
Q ss_pred EEeCCCC---------EEEEEEeCCCCeEEEEEccC
Q psy5792 328 TLDRKNK---------RVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 328 alD~~~~---------~LYw~d~~~~~~i~~~~~~G 354 (377)
++.+.+. +++++-. ..+.|...++++
T Consensus 361 ~~~~~g~~~~~~~~~~~~l~s~~-~dg~i~iw~~~~ 395 (397)
T 1sq9_A 361 KFLKKGWRSGMGADLNESLCCVC-LDRSIRWFREAG 395 (397)
T ss_dssp EEECTTTSBSTTCTTSCEEEEEE-TTTEEEEEEEEC
T ss_pred EeccccccccccccccceEEEec-CCCcEEEEEcCC
Confidence 8876542 4555555 567777666654
No 169
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.93 E-value=0.017 Score=55.51 Aligned_cols=239 Identities=8% Similarity=0.008 Sum_probs=135.5
Q ss_pred ceEEEEE--ECCeEEEEcCCCCceEEEc-C--CCCceEEEec--CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccc
Q psy5792 60 QVVAAVF--YKGRIIYSDANDGNIRSIN-L--DGSNSTVLRN--NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLG 131 (377)
Q Consensus 60 ~p~~lav--~~~~ly~td~~~~~I~~~~-~--~g~~~~~~~~--~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~ 131 (377)
...++++ .+..|+++-..++.|...+ . +|+....+.. ... +.++++ +++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-sp~~--------------------- 161 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI-AEDD--------------------- 161 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE-CTTS---------------------
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE-cCCC---------------------
Confidence 3567777 4445566666667777777 4 5666555532 111 444443 2221
Q ss_pred cCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeE-EEEec-CCCCceEEEEEECC--CCEEEEEEcCCC
Q psy5792 132 PLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQ-VLGPL-SKVSLAAKVDFHAA--EDYIYWVDIDHG 207 (377)
Q Consensus 132 ~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~-~~~~~-~~~~~~~~l~~d~~--~~~ly~sd~~~~ 207 (377)
.+|+.+.. .|.|+.+++..... .. ....+ .....+..+++.+. .+.++++-...+
T Consensus 162 ------------------~~l~~~~~-~g~v~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~ 220 (450)
T 2vdu_B 162 ------------------TTVIIADK-FGDVYSIDINSIPE--EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE 220 (450)
T ss_dssp ------------------SEEEEEET-TSEEEEEETTSCCC--SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS
T ss_pred ------------------CEEEEEeC-CCcEEEEecCCccc--ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC
Confidence 24555544 44688888765432 10 00011 12345788999985 144444444668
Q ss_pred cEEEEEcCCCCc-EEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC-----------
Q psy5792 208 TISRTHRDGTGR-ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG----------- 275 (377)
Q Consensus 208 ~I~~~~~~G~~~-~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~----------- 275 (377)
.|...++..... ..+.. .....+.++++. .+.++++-...++|.+.++........+..
T Consensus 221 ~i~vwd~~~~~~~~~~~~-------~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLF-------GHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQ 291 (450)
T ss_dssp CEEEEEESCTTCEEEECC-------CCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTT
T ss_pred cEEEEECCCCceeeeeec-------CCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhc
Confidence 888888864432 23232 233457888887 455555656678999999876543322221
Q ss_pred --------------CCCCceeEEEcCCCCeEEEEecCCCCeEEEEec--CCCC-eE--EEEecCCCCceEEEEeCCCCEE
Q psy5792 276 --------------GVDQPSALAVDPESGYLFWSESGKIPLIARAGL--DGKK-QT--ILAQEIIMPIKDITLDRKNKRV 336 (377)
Q Consensus 276 --------------~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l--dG~~-~~--~l~~~~~~~P~glalD~~~~~L 336 (377)
.-....+|+..|...+|+.+... ...|...++ .... .+ ..+... ..+..+++++ +.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~-d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~ 367 (450)
T 2vdu_B 292 HLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA-TKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEF 367 (450)
T ss_dssp SBC----------CBCCCEEEEEECSSSSEEEEEETT-CSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEE
T ss_pred ccccccccccccccceEEEEEEEEeCCCCEEEEEECC-CCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcE
Confidence 11235789999988888888743 466766666 2221 11 112222 6788999986 456
Q ss_pred EEEEeCCCC---------eEEEEEccCC
Q psy5792 337 YWCYSVGSN---------VLESMDYSGG 355 (377)
Q Consensus 337 Yw~d~~~~~---------~i~~~~~~G~ 355 (377)
+.+-. ... .|+.++.+++
T Consensus 368 ~v~~~-~~~~~~~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 368 QVTLD-NKESSGVQKNFAKFIEYNLNEN 394 (450)
T ss_dssp EEEEC-CTTCCSSCCCSEEEEEEETTTT
T ss_pred EEEEe-cccCCCCCCcceEEEEEEcCCC
Confidence 66644 321 6777776644
No 170
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.89 E-value=0.011 Score=55.62 Aligned_cols=225 Identities=12% Similarity=0.020 Sum_probs=135.7
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCC--------c-EEEEEeCCCCCceEEEEEECC--eEEEEcCCCCceEEE
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEV--------K-VAKVVSMPDAAQVVAAVFYKG--RIIYSDANDGNIRSI 84 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG--------~-~~~i~~~~~~~~p~~lav~~~--~ly~td~~~~~I~~~ 84 (377)
..+.+++..+.++.++.+-+..+.|...++.. . ...+. ........|++..+ .++++-..++.|...
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 36778888884455556666678898888765 3 34443 45567788888332 466666677888888
Q ss_pred c-CCCCceEEE--ecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCC
Q psy5792 85 N-LDGSNSTVL--RNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGY 160 (377)
Q Consensus 85 ~-~~g~~~~~~--~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~ 160 (377)
+ .+++....+ ..... +..+.+ +++. ..|+.+. ..+
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~-~~~~---------------------------------------~~l~~~~-~d~ 198 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDW-SRDG---------------------------------------ALICTSC-RDK 198 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEE-CTTS---------------------------------------SCEEEEE-TTS
T ss_pred ECCCCCccEEEecCCCCCceEEEEE-CCCC---------------------------------------CEEEEEe-cCC
Confidence 8 666555555 22222 444443 2221 1244333 334
Q ss_pred eEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEE---cCCCcEEEEEcCCCCc-EEEEeccccCCCCCCCC
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVD---IDHGTISRTHRDGTGR-ENIIEYVETGDPTPVDQ 236 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd---~~~~~I~~~~~~G~~~-~~i~~~~~~~~~~~~~~ 236 (377)
.|+..++..... ...+........+..+++.+. +.++.+- ...+.|...++..... ...... .....
T Consensus 199 ~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~ 269 (402)
T 2aq5_A 199 RVRVIEPRKGTV--VAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLEEPLSLQEL------DTSSG 269 (402)
T ss_dssp EEEEEETTTTEE--EEEEECSSCSSSCCEEEECST-TEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC------CCCSS
T ss_pred cEEEEeCCCCce--eeeeccCCCCCcceEEEEcCC-CcEEEEeccCCCCceEEEEcCccccCCceEEec------cCCCc
Confidence 688888765432 111111222233678888874 5555554 4567888888875332 122210 23345
Q ss_pred cceEEEeccCCeEEEEcCCCCEEEEEEcCCCe--EEEEeeC-CCCCceeEEEcCCCCeE
Q psy5792 237 FTDIAVDWIAQNIYWSDPKENVIEVARLTGQY--RYVLISG-GVDQPSALAVDPESGYL 292 (377)
Q Consensus 237 p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~--~~~l~~~-~~~~P~~iavdp~~g~l 292 (377)
+..+++++.++.||.+....+.|.+.++.... ...+... ......++++.|....+
T Consensus 270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLE 328 (402)
T ss_dssp CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccc
Confidence 88899999888898888778889999987654 3333321 23557899999854443
No 171
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.88 E-value=0.015 Score=59.89 Aligned_cols=160 Identities=13% Similarity=0.166 Sum_probs=99.3
Q ss_pred eEEEEEECCCCEEEEEEcC----CCcEEEEEcCCC--C-cEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcC---CC
Q psy5792 187 AAKVDFHAAEDYIYWVDID----HGTISRTHRDGT--G-RENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDP---KE 256 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~~----~~~I~~~~~~G~--~-~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~---~~ 256 (377)
..++.+.+.+.+|+++... ...|+.+++++. . .+.+.. ........ +.+.++.||+... .+
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--------~~~~~~~~-~~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP--------DLKAQWDF-VDGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC--------SSSSCEEE-EEEETTEEEEEECTTCTT
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC--------CCCceEEE-EeccCCEEEEEECCCCCC
Confidence 6788888878888876542 358999998765 3 445543 22222222 3355788877633 25
Q ss_pred CEEEEEEcCC--CeEEEEeeCCCCCceeEEEcCCCCeEEEEecC-CCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCC
Q psy5792 257 NVIEVARLTG--QYRYVLISGGVDQPSALAVDPESGYLFWSESG-KIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKN 333 (377)
Q Consensus 257 ~~I~~~~~~g--~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g-~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~ 333 (377)
.+|.+.++++ ...+.++........+++.+ ++.|+++... ...+|+..+++|...+.+.........+++.++.+
T Consensus 341 ~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~ 418 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGD 418 (741)
T ss_dssp CEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTC
T ss_pred CEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCC
Confidence 6899999987 34455655433334566665 6778877532 24688888988775544432123445667777666
Q ss_pred CEEEEEEe--CCCCeEEEEEccCCce
Q psy5792 334 KRVYWCYS--VGSNVLESMDYSGGSK 357 (377)
Q Consensus 334 ~~LYw~d~--~~~~~i~~~~~~G~~~ 357 (377)
+.|+++-. ....+|+..++.++..
T Consensus 419 ~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 419 RHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp SCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 67776533 1346888999886543
No 172
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.85 E-value=0.017 Score=53.10 Aligned_cols=246 Identities=10% Similarity=0.057 Sum_probs=136.2
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc----EEEEEeCCCCCceEEEEEE-C--CeEEEEcCCCCceEEEc-CC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK----VAKVVSMPDAAQVVAAVFY-K--GRIIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~----~~~i~~~~~~~~p~~lav~-~--~~ly~td~~~~~I~~~~-~~ 87 (377)
+.+.++++.+.+.+|... ...+.|...++++. ...+ .........|++. . +.++++-..++.|...+ .+
T Consensus 12 ~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATC-SSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CCEEEEEECSSSSEEEEE-ETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred ccEEEEEEcCCCCEEEEE-ECCCcEEEEecCCCcceeeeEe--cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 357788888877666444 45678888888644 2223 2344566788883 2 45555545567888888 55
Q ss_pred CC--ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEE
Q psy5792 88 GS--NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMG 164 (377)
Q Consensus 88 g~--~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~ 164 (377)
++ ....+..... +..+.+ +++.. ..+++.+. ..+.|+.
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~-~~~~~-------------------------------------~~~l~~~~-~d~~i~v 129 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQW-APHEY-------------------------------------GPLLLVAS-SDGKVSV 129 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEE-CCGGG-------------------------------------CSEEEEEE-TTSEEEE
T ss_pred CceeEeeeecCCCcceEEEEe-CCCCC-------------------------------------CCEEEEec-CCCcEEE
Confidence 54 2222222222 344433 22100 01333333 3346888
Q ss_pred EEcCCCCceeeEEEEecCCCCceEEEEEECC------------CCEEEEEEcCCCcEEEEEcCCCCcE-EEEeccccCCC
Q psy5792 165 IKYNKNESKVTQVLGPLSKVSLAAKVDFHAA------------EDYIYWVDIDHGTISRTHRDGTGRE-NIIEYVETGDP 231 (377)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~------------~~~ly~sd~~~~~I~~~~~~G~~~~-~i~~~~~~~~~ 231 (377)
.++..... ............+..+++.+. ++.++++-...+.|...++...... .+... ..
T Consensus 130 ~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~--- 203 (379)
T 3jrp_A 130 VEFKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LE--- 203 (379)
T ss_dssp EECCTTSC--CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE-EC---
T ss_pred EecCCCCc--eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE-Ee---
Confidence 88866532 111222233455788888874 3444445446678888877643322 11110 00
Q ss_pred CCCCCcceEEEeccC--CeEEEEcCCCCEEEEEEcCCCe---EEEEeeC--CCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5792 232 TPVDQFTDIAVDWIA--QNIYWSDPKENVIEVARLTGQY---RYVLISG--GVDQPSALAVDPESGYLFWSESGKIPLIA 304 (377)
Q Consensus 232 ~~~~~p~~iavD~~~--~~lYwtd~~~~~I~~~~~~g~~---~~~l~~~--~~~~P~~iavdp~~g~lywtd~g~~~~I~ 304 (377)
.....+.++++.+.. +.++.+-...+.|.+.+++... ...+... ......+++++|...+|+.+.....-+|+
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 223457889998763 5666666667788888887642 2233322 23456889999977777776643233445
Q ss_pred EEecC
Q psy5792 305 RAGLD 309 (377)
Q Consensus 305 r~~ld 309 (377)
..+..
T Consensus 284 ~~~~~ 288 (379)
T 3jrp_A 284 KENLE 288 (379)
T ss_dssp EEEET
T ss_pred eCCCC
Confidence 54443
No 173
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.85 E-value=0.0037 Score=63.87 Aligned_cols=152 Identities=9% Similarity=0.035 Sum_probs=87.4
Q ss_pred ceEEEEEECCCCEEEE-EEcC--CCcEEEEEcCCCCcEEEEeccccCCCCC-CC-CcceEEEeccCCeEEEE-cCCCC--
Q psy5792 186 LAAKVDFHAAEDYIYW-VDID--HGTISRTHRDGTGRENIIEYVETGDPTP-VD-QFTDIAVDWIAQNIYWS-DPKEN-- 257 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~-sd~~--~~~I~~~~~~G~~~~~i~~~~~~~~~~~-~~-~p~~iavD~~~~~lYwt-d~~~~-- 257 (377)
....+++.+.+..|+. ++.. ...|+.+++++.....+..... .. +. .+..+++.+.++.|+++ ....+
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES----EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC----SSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc----CCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 4567888886666643 3432 2468888887655444432000 01 11 02467888777778875 43333
Q ss_pred ----EEEEEE-cCCCe---EEEEeeCCCCCceeEEEcCCCCeEEEEecC---CCCeEEEEecCCCC-eEEEEec--CCCC
Q psy5792 258 ----VIEVAR-LTGQY---RYVLISGGVDQPSALAVDPESGYLFWSESG---KIPLIARAGLDGKK-QTILAQE--IIMP 323 (377)
Q Consensus 258 ----~I~~~~-~~g~~---~~~l~~~~~~~P~~iavdp~~g~lywtd~g---~~~~I~r~~ldG~~-~~~l~~~--~~~~ 323 (377)
+|+..+ .++.. .+.+..........++++|.+..||++... ...+|++++++|.. .+.+... .-..
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 411 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCT 411 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCC
T ss_pred cceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCC
Confidence 688888 55554 444433222222336899999999887543 24679999988753 3332211 0123
Q ss_pred ceEEEEeCCCCEEEEEEe
Q psy5792 324 IKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 324 P~glalD~~~~~LYw~d~ 341 (377)
...+++.+.+++|.+.-.
T Consensus 412 ~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 412 YFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp CCEEEECTTSSEEEEECC
T ss_pred eEEEEECCCCCEEEEEcc
Confidence 456788777777766544
No 174
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.83 E-value=0.022 Score=53.70 Aligned_cols=236 Identities=10% Similarity=0.012 Sum_probs=144.9
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEcC--CCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSINL--DGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~--~g~~~ 91 (377)
..+.+++..+.+..|+.. +..+.|...++... .+++. ........+++.++.++.. ..++.|...+. .+...
T Consensus 135 ~~v~~v~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVG-LGNGLVDIYDVESQTKLRTMA--GHQARVGCLSWNRHVLSSG-SRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp CCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEEETTEEEEE-ETTSEEEEEETTSSSCEE
T ss_pred CCEEEEEECCCCCEEEEE-CCCCeEEEEECcCCeEEEEec--CCCCceEEEEECCCEEEEE-cCCCCEEEEecccCccee
Confidence 357788888866655444 45678999998766 55443 4455667777766555544 45677887773 23334
Q ss_pred EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 92 TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 92 ~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
..+..... +.++.+ +++. ..++.+. ..+.|+..++...
T Consensus 211 ~~~~~~~~~v~~~~~-~~~~---------------------------------------~~l~s~~-~d~~v~iwd~~~~ 249 (401)
T 4aez_A 211 GTLQGHSSEVCGLAW-RSDG---------------------------------------LQLASGG-NDNVVQIWDARSS 249 (401)
T ss_dssp EEEECCSSCEEEEEE-CTTS---------------------------------------SEEEEEE-TTSCEEEEETTCS
T ss_pred eEEcCCCCCeeEEEE-cCCC---------------------------------------CEEEEEe-CCCeEEEccCCCC
Confidence 44433323 444443 2221 1343333 3345888888765
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEEEc--CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI--DHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~--~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
.. ..........+.++++.+.+..++.+-. ..+.|...++.......... .-..+.++++.+.+..
T Consensus 250 ~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 250 IP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--------AGSQVTSLIWSPHSKE 317 (401)
T ss_dssp SE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--------CSSCEEEEEECSSSSE
T ss_pred Cc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--------CCCcEEEEEECCCCCe
Confidence 33 1111123445788999987778887754 57889999987544333333 2345889999887666
Q ss_pred EEEEc-CCCCEEEEEEcCCCeEEEE--eeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 249 IYWSD-PKENVIEVARLTGQYRYVL--ISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 249 lYwtd-~~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
|+.+. ...+.|.+.++........ +.........++++|...+|+.+.. ...|...++..
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~--dg~i~iw~~~~ 380 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS--DENLKFWRVYD 380 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT--TSEEEEEECCC
T ss_pred EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEECCC
Confidence 76653 3578899999877543332 3344566889999996666666543 46777777654
No 175
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.83 E-value=0.02 Score=53.16 Aligned_cols=239 Identities=11% Similarity=-0.002 Sum_probs=136.3
Q ss_pred eEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEe----cCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCC
Q psy5792 61 VVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLR----NNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLS 134 (377)
Q Consensus 61 p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~----~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~ 134 (377)
...+++..+..+++-..++.|+..+ .+|+...++. .... +..+++ +++.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~-spdg------------------------ 139 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV-LSSG------------------------ 139 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE-CTTS------------------------
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE-CCCC------------------------
Confidence 5667775554455556677888888 5665543322 1112 344443 2222
Q ss_pred CccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCC-CCceEEEEEECCCCEEEEEEcCCCcEEEEE
Q psy5792 135 KVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSK-VSLAAKVDFHAAEDYIYWVDIDHGTISRTH 213 (377)
Q Consensus 135 ~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~ 213 (377)
-++++....+.|+..++.... .+..+.+ ...+..+++.+.+..++.+-...+.|...+
T Consensus 140 ----------------~~l~sgs~d~~i~iwd~~~~~-----~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd 198 (344)
T 4gqb_B 140 ----------------TQAVSGSKDICIKVWDLAQQV-----VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWD 198 (344)
T ss_dssp ----------------SEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ----------------CEEEEEeCCCeEEEEECCCCc-----EEEEEcCcCCceEEEEecCCCCCceeeecccccccccc
Confidence 133444334458888886552 2233333 445788999887777888776778898888
Q ss_pred cCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEE
Q psy5792 214 RDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLF 293 (377)
Q Consensus 214 ~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly 293 (377)
+........+.. ...-..+..+++.+.+++++.+-...+.|.+.++........+........++++.|....+.
T Consensus 199 ~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 199 TRCPKPASQIGC-----SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp TTSSSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCE
T ss_pred ccccceeeeeec-----ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEE
Confidence 864332222210 011224778888877788888877778999999875443222333455678999998665544
Q ss_pred EEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 294 WSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 294 wtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.+-. ....|...++.......+ ..--....++++.+.+++|..+-. ..++|..-++.
T Consensus 274 asgs-~D~~i~vwd~~~~~~~~~-~~H~~~V~~v~~sp~~~~llas~s-~D~~v~~w~v~ 330 (344)
T 4gqb_B 274 ASLS-EDCSLAVLDSSLSELFRS-QAHRDFVRDATWSPLNHSLLTTVG-WDHQVVHHVVP 330 (344)
T ss_dssp EEEE-TTSCEEEECTTCCEEEEE-CCCSSCEEEEEECSSSTTEEEEEE-TTSCEEEEECC
T ss_pred EEEe-CCCeEEEEECCCCcEEEE-cCCCCCEEEEEEeCCCCeEEEEEc-CCCeEEEEECC
Confidence 4432 235666666654332221 111234677777665556655555 45555444443
No 176
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.82 E-value=0.015 Score=54.28 Aligned_cols=188 Identities=9% Similarity=-0.049 Sum_probs=110.4
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
+++....+.|+..++..... +..+. ....+..+++.+.++.++.+-...+.|...++.......... ..
T Consensus 154 l~sgs~dg~v~iwd~~~~~~-----~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~-----~~ 223 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAV-----LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID-----FC 223 (357)
T ss_dssp EEEEETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC-----CT
T ss_pred EEEEeCCCeEEEEECCCCcE-----EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee-----ec
Confidence 33333334588887765422 22222 244578899988777777777677888887775332211111 00
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
..-..+..+++.+..++++.+-...+.|...++........+........++++.|..+.+..+-. ....|...+++..
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs-~D~~i~iwd~~~~ 302 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS-EDCTVAVLDADFS 302 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE-TTSCEEEECTTSC
T ss_pred cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe-CCCEEEEEECCCC
Confidence 122347788888777888877666778999998754433333333455689999987655444432 2456776676644
Q ss_pred CeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 312 KQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 312 ~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
....... --...+++++.+.+++++.+-. ..++|..-++.
T Consensus 303 ~~~~~~~-H~~~V~~vafsP~d~~~l~s~s-~Dg~v~iW~~~ 342 (357)
T 4g56_B 303 EVFRDLS-HRDFVTGVAWSPLDHSKFTTVG-WDHKVLHHHLP 342 (357)
T ss_dssp EEEEECC-CSSCEEEEEECSSSTTEEEEEE-TTSCEEEEECC
T ss_pred cEeEECC-CCCCEEEEEEeCCCCCEEEEEc-CCCeEEEEECC
Confidence 3222211 1245678888765555555555 56666666654
No 177
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.82 E-value=0.011 Score=63.65 Aligned_cols=171 Identities=10% Similarity=0.022 Sum_probs=110.5
Q ss_pred EEEEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCC-ceEEEEEECCCCEEEEEEcCCCcEE-EEEcCCCCcEEEEeccc
Q psy5792 151 FILFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVS-LAAKVDFHAAEDYIYWVDIDHGTIS-RTHRDGTGRENIIEYVE 227 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~-~~~~l~~d~~~~~ly~sd~~~~~I~-~~~~~G~~~~~i~~~~~ 227 (377)
.|+++... .|..+++.+... . .+. ... .+..+++. .++.|+++.. ...|+ ..++++...+.+..
T Consensus 310 ~la~~~~~--~i~~~~~~~~~~----~--~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~~--- 376 (1045)
T 1k32_A 310 LIAFVSRG--QAFIQDVSGTYV----L--KVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFEE--- 376 (1045)
T ss_dssp CEEEEETT--EEEEECTTSSBE----E--ECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECCC---
T ss_pred EEEEEEcC--EEEEEcCCCCce----E--EccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEecC---
Confidence 35555543 377777665422 1 112 122 45566666 5566777664 56888 78887654333322
Q ss_pred cCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecC--------C
Q psy5792 228 TGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG--------K 299 (377)
Q Consensus 228 ~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g--------~ 299 (377)
....+..+++.+.++.|+++.. .+.|.+.++++.....+.........++++.|...+|.++... .
T Consensus 377 -----~~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~ 450 (1045)
T 1k32_A 377 -----NLGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 450 (1045)
T ss_dssp -----CCCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred -----CccceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCC
Confidence 2345788999987777877654 4689999998776666664444445899999988888887542 1
Q ss_pred CCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEe
Q psy5792 300 IPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 300 ~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~ 341 (377)
...|+..++++.....+.. ....+..+++.+.+++|||...
T Consensus 451 ~~~i~l~d~~~g~~~~l~~-~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 451 MQAIHVYDMEGRKIFAATT-ENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEEEEETTTTEEEECSC-SSSBEEEEEECTTSCEEEEEES
T ss_pred CCeEEEEECCCCcEEEeeC-CCcccCCceEcCCCCEEEEEec
Confidence 2588888888755433332 2345677889888889998765
No 178
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.79 E-value=0.021 Score=52.23 Aligned_cols=286 Identities=9% Similarity=0.007 Sum_probs=159.9
Q ss_pred cCCccccccCC---CCeEEEEeCCCCcEEEEEcC-Cc-EEEEEeC---CCCCceEEEEEE-C----CeEEEEcCCCCceE
Q psy5792 16 GAVASTLKPQS---GPFVYGVKTLSHSLHYVNIE-VK-VAKVVSM---PDAAQVVAAVFY-K----GRIIYSDANDGNIR 82 (377)
Q Consensus 16 ~~~~~~~~d~~---~~~ly~~d~~~~~I~~~~~d-G~-~~~i~~~---~~~~~p~~lav~-~----~~ly~td~~~~~I~ 82 (377)
..+.+++..+. +..++++-...+.|...++. +. .+.+... ........+++. + +.++++-..++.|.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 46778888873 44555566666789999988 44 5555311 133457888883 3 35666666778899
Q ss_pred EEc-CCCCceEEEecCCC-ceeEEeeec-CCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCC
Q psy5792 83 SIN-LDGSNSTVLRNNAG-ISDFILFSV-NSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSG 159 (377)
Q Consensus 83 ~~~-~~g~~~~~~~~~~~-p~~i~v~~~-~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~ 159 (377)
..+ .+++....+..... +..+.+ ++ +.. ++++....
T Consensus 99 v~d~~~~~~~~~~~~~~~~i~~~~~-~~~~~~----------------------------------------~l~s~~~d 137 (366)
T 3k26_A 99 IINPITMQCIKHYVGHGNAINELKF-HPRDPN----------------------------------------LLLSVSKD 137 (366)
T ss_dssp EECTTTCCEEEEEESCCSCEEEEEE-CSSCTT----------------------------------------EEEEEETT
T ss_pred EEEchhceEeeeecCCCCcEEEEEE-CCCCCC----------------------------------------EEEEEeCC
Confidence 998 66766666653333 555554 22 211 33333333
Q ss_pred CeEEEEEcCCCCceeeEEEEe-cCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecc------------
Q psy5792 160 YDIMGIKYNKNESKVTQVLGP-LSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYV------------ 226 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~------------ 226 (377)
|.|+..++..... ...+.. ......+..+++++.++.|+.+. ..+.|...++............
T Consensus 138 g~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 138 HALRLWNIQTDTL--VAIFGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp SCEEEEETTTTEE--EEEECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCC
T ss_pred CeEEEEEeecCeE--EEEecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCCCccccccceeEEecCCCCcccc
Confidence 4588888875532 111100 12345688999998766666555 5678888887632110000000
Q ss_pred ---------ccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE--------------EEEeeCCCCCceeE
Q psy5792 227 ---------ETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR--------------YVLISGGVDQPSAL 283 (377)
Q Consensus 227 ---------~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~--------------~~l~~~~~~~P~~i 283 (377)
.......-..+..++++ ++++.+-...+.|.+.++..... .............+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 291 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM 291 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred cceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence 00000022346677776 44666767778899988765321 11222233456778
Q ss_pred EEcCC--CCeEEEEecCCCCeEEEEecCCCCe----EEEEecC--CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEc
Q psy5792 284 AVDPE--SGYLFWSESGKIPLIARAGLDGKKQ----TILAQEI--IMPIKDITLDRKNKRVYWCYSVGSNVLESMDY 352 (377)
Q Consensus 284 avdp~--~g~lywtd~g~~~~I~r~~ldG~~~----~~l~~~~--~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~ 352 (377)
++.|. ..+|+... ..+.|...++..... ....... -.....+++.+.+..|..+. ..+.|...++
T Consensus 292 ~~s~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~ 364 (366)
T 3k26_A 292 RFSMDFWQKMLALGN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC--DDASIWRWDR 364 (366)
T ss_dssp CCEECTTSSEEEEEC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE--TTSEEEEEEC
T ss_pred EEcCCCCCcEEEEEe--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe--CCCEEEEEEe
Confidence 88876 55665554 346788888775431 1122221 24567888876555555444 4566655544
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.78 E-value=0.011 Score=55.10 Aligned_cols=146 Identities=7% Similarity=0.051 Sum_probs=84.0
Q ss_pred eEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC--CCc--EEEEEcCCCCcEEEEeccccCCCCCCCC
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID--HGT--ISRTHRDGTGRENIIEYVETGDPTPVDQ 236 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~--~~~--I~~~~~~G~~~~~i~~~~~~~~~~~~~~ 236 (377)
.|..+++++... ..+..-.....+..+++.+.++.|+++... ... |+.+++++...+.+.. .. .
T Consensus 217 ~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-------~~--~ 284 (396)
T 3c5m_A 217 RMWLVNEDGSNV---RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-------MP--P 284 (396)
T ss_dssp CCEEEETTSCCC---EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-------CC--S
T ss_pred eEEEEECCCCce---eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-------CC--C
Confidence 478888776533 112110012246677888878877776432 224 8989887655444443 11 1
Q ss_pred cceEEEec-cCCeEEEEc---------------CCCCEEEEEEcCCCeEEEEeeCCCC----------CceeEEEcCCCC
Q psy5792 237 FTDIAVDW-IAQNIYWSD---------------PKENVIEVARLTGQYRYVLISGGVD----------QPSALAVDPESG 290 (377)
Q Consensus 237 p~~iavD~-~~~~lYwtd---------------~~~~~I~~~~~~g~~~~~l~~~~~~----------~P~~iavdp~~g 290 (377)
.. +++.+ .++.|+.+. .....|++.++++...+.+...... .+..+++.|...
T Consensus 285 ~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 285 CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCC
Confidence 12 56665 444444432 1346899999987665555443211 245678888877
Q ss_pred eEEEEecC-CCCeEEEEecCCCCeEEEEec
Q psy5792 291 YLFWSESG-KIPLIARAGLDGKKQTILAQE 319 (377)
Q Consensus 291 ~lywtd~g-~~~~I~r~~ldG~~~~~l~~~ 319 (377)
+|+++... ....|+++++++...+++..+
T Consensus 364 ~l~~~s~~~~~~~l~~~~~~~~~~~~~~~~ 393 (396)
T 3c5m_A 364 GVLFTSDFEGVPAIYIADVPESYKHLEHHH 393 (396)
T ss_dssp EEEEEECTTSSCEEEEEECCTTCC------
T ss_pred eEEEEecCCCCceEEEEEEccccccccccc
Confidence 88887642 357899999998887776553
No 180
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.77 E-value=0.023 Score=52.17 Aligned_cols=189 Identities=10% Similarity=-0.007 Sum_probs=106.8
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++.+. ..+.|+..++..... ............+..+++.+.+..|+... ..+.|...+++......+......
T Consensus 67 l~~~~-~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~--- 139 (372)
T 1k8k_C 67 IVTCG-TDRNAYVWTLKGRTW--KPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKK--- 139 (372)
T ss_dssp EEEEE-TTSCEEEEEEETTEE--EEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECT---
T ss_pred EEEEc-CCCeEEEEECCCCee--eeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeec---
Confidence 44333 334587777765432 11222123345688999998777777666 457777777765432111110000
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC-------------------CCeEEEEeeCCCCCceeEEEcCCCCeE
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT-------------------GQYRYVLISGGVDQPSALAVDPESGYL 292 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~-------------------g~~~~~l~~~~~~~P~~iavdp~~g~l 292 (377)
.....+.++++.+. ++++++-...+.|.+.++. +..... +........+++++|...+|
T Consensus 140 ~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l 217 (372)
T 1k8k_C 140 PIRSTVLSLDWHPN-SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE-SSSSCGWVHGVCFSANGSRV 217 (372)
T ss_dssp TCCSCEEEEEECTT-SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE-CCCCSSCEEEEEECSSSSEE
T ss_pred ccCCCeeEEEEcCC-CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe-cCCCCCeEEEEEECCCCCEE
Confidence 22345888999874 4455555556788888853 232222 22334567899999976677
Q ss_pred EEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 293 FWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 293 ywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
+.+.. ...|...++........+...-..+..+++.+.+..|... ..+.|...++..
T Consensus 218 ~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~d~~i~i~~~~~ 274 (372)
T 1k8k_C 218 AWVSH--DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG---HDCFPVLFTYDS 274 (372)
T ss_dssp EEEET--TTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE---TTSSCEEEEEET
T ss_pred EEEeC--CCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE---eCCeEEEEEccC
Confidence 66653 4678888886444333333323456889998654433333 345555555543
No 181
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.75 E-value=0.0033 Score=62.75 Aligned_cols=150 Identities=9% Similarity=-0.050 Sum_probs=95.5
Q ss_pred EEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC---CCEEEEEEcC
Q psy5792 189 KVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK---ENVIEVARLT 265 (377)
Q Consensus 189 ~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~---~~~I~~~~~~ 265 (377)
..++.+..+.++++....+.+...++++...+.+.. ... ..+++++.++.|+++... ...|++.+++
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-------~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~ 183 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-------LPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS 183 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-------ESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETT
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-------CCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC
Confidence 344555466665555455555566777665555544 111 778898888888866432 2579999998
Q ss_pred CCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEE--------EeCCCCEEE
Q psy5792 266 GQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDIT--------LDRKNKRVY 337 (377)
Q Consensus 266 g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~gla--------lD~~~~~LY 337 (377)
+...+.+... ......++..|....|+.++......|++.++++...+ ++...-..+.+++ +++.+ ++|
T Consensus 184 ~g~~~~l~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~ 260 (582)
T 3o4h_A 184 SGGLRVFDSG-EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLA 260 (582)
T ss_dssp TCCCEEECCS-SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEE
T ss_pred CCCceEeecC-CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEE
Confidence 7766666443 44568999999888888555432348999999987776 4443222333444 77655 777
Q ss_pred EEEeCCCCeEEEEEc
Q psy5792 338 WCYSVGSNVLESMDY 352 (377)
Q Consensus 338 w~d~~~~~~i~~~~~ 352 (377)
++-. ..+++....+
T Consensus 261 ~~~~-~~g~~~l~~~ 274 (582)
T 3o4h_A 261 VVAR-REGRSAVFID 274 (582)
T ss_dssp EEEE-ETTEEEEEET
T ss_pred EEEE-cCCcEEEEEE
Confidence 7766 5566655555
No 182
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.025 Score=51.65 Aligned_cols=241 Identities=12% Similarity=0.107 Sum_probs=142.8
Q ss_pred cCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcC
Q psy5792 45 IEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYN 120 (377)
Q Consensus 45 ~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~ 120 (377)
..|. .+.+....+-.....|++ .++.+.++-..++.|...+ .+++....+..... +.++.+ +++..
T Consensus 18 ~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~~~~~--------- 87 (369)
T 3zwl_B 18 FQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV-DCFTK--------- 87 (369)
T ss_dssp SSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEE-CTTSS---------
T ss_pred EeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEE-cCCCC---------
Confidence 4555 333321245556777888 3344444444567888888 66766666653333 445543 22211
Q ss_pred CCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEE
Q psy5792 121 KNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIY 200 (377)
Q Consensus 121 ~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly 200 (377)
+|+.+ ...+.|+..++..... +..+.....+..+++.+.+..++
T Consensus 88 ------------------------------~l~s~-~~dg~i~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~ 131 (369)
T 3zwl_B 88 ------------------------------YCVTG-SADYSIKLWDVSNGQC-----VATWKSPVPVKRVEFSPCGNYFL 131 (369)
T ss_dssp ------------------------------EEEEE-ETTTEEEEEETTTCCE-----EEEEECSSCEEEEEECTTSSEEE
T ss_pred ------------------------------EEEEE-eCCCeEEEEECCCCcE-----EEEeecCCCeEEEEEccCCCEEE
Confidence 33333 3344688888876543 12222445688999999777777
Q ss_pred EEEcC----CCcEEEEEcCCCC------------cEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEc
Q psy5792 201 WVDID----HGTISRTHRDGTG------------RENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARL 264 (377)
Q Consensus 201 ~sd~~----~~~I~~~~~~G~~------------~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~ 264 (377)
.+... .+.|...++.... ...+.. ......+..+++.+.+..|+ +-...+.|.+.++
T Consensus 132 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~ 204 (369)
T 3zwl_B 132 AILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT------HEGLDAATVAGWSTKGKYII-AGHKDGKISKYDV 204 (369)
T ss_dssp EEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC------CTTCCCEEEEEECGGGCEEE-EEETTSEEEEEET
T ss_pred EecCCccCCCCEEEEEEecCCccceeecccccceeeeccC------CcCccceeEEEEcCCCCEEE-EEcCCCEEEEEEC
Confidence 66532 2677766664321 111111 01122678888987655555 4445589999999
Q ss_pred CC-CeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEe
Q psy5792 265 TG-QYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 265 ~g-~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~ 341 (377)
.. ......+........+++++|...+|+.+.. ...|...++........... -.....+++.+.+..|+.+..
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 205 SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR--DTNSFLVDVSTLQVLKKYET-DCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEEC-SSCEEEEEECSSSSEEEEEEC
T ss_pred CCCcEeEEEEecCCCceeEEEECCCCCEEEEecC--CceEEEEECCCCceeeeecC-CCCceeEEecCCCceEEEeec
Confidence 87 3433344444566799999997666666653 46888888875544444443 356778888887777777665
No 183
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.74 E-value=0.026 Score=51.70 Aligned_cols=222 Identities=10% Similarity=0.077 Sum_probs=128.9
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNST 92 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~ 92 (377)
.+.++++.+... +..+-+..+.|...|+... ...+. ........+++ .++....+-...+.|...+ .+++...
T Consensus 82 ~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 82 GVVSVDISHTLP-IAASSSLDAHIRLWDLENGKQIKSID--AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp CEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEE--CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEE
T ss_pred CEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCEEEEEe--CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeE
Confidence 455566665543 4445556778888887655 55553 33344566777 3445555555667777777 5555544
Q ss_pred EEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 93 VLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 93 ~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
.+..... +..+++ +++. .+|+.+. ..+.|+..++....
T Consensus 159 ~~~~~~~~v~~~~~-spdg---------------------------------------~~lasg~-~dg~i~iwd~~~~~ 197 (321)
T 3ow8_A 159 SLDTRGKFILSIAY-SPDG---------------------------------------KYLASGA-IDGIINIFDIATGK 197 (321)
T ss_dssp EEECSSSCEEEEEE-CTTS---------------------------------------SEEEEEE-TTSCEEEEETTTTE
T ss_pred EecCCCceEEEEEE-CCCC---------------------------------------CEEEEEc-CCCeEEEEECCCCc
Confidence 4433222 333332 2221 1343333 33458888876542
Q ss_pred ceeeEEEEecCC-CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEE
Q psy5792 172 SKVTQVLGPLSK-VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIY 250 (377)
Q Consensus 172 ~~~~~~~~~~~~-~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lY 250 (377)
. +..+.. ...+..+++.+.+..|. +-...+.|...++.......... .....+..+++.+.+. ..
T Consensus 198 ~-----~~~~~~h~~~v~~l~~spd~~~l~-s~s~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~sp~~~-~l 263 (321)
T 3ow8_A 198 L-----LHTLEGHAMPIRSLTFSPDSQLLV-TASDDGYIKIYDVQHANLAGTLS-------GHASWVLNVAFCPDDT-HF 263 (321)
T ss_dssp E-----EEEECCCSSCCCEEEECTTSCEEE-EECTTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSS-EE
T ss_pred E-----EEEEcccCCceeEEEEcCCCCEEE-EEcCCCeEEEEECCCcceeEEEc-------CCCCceEEEEECCCCC-EE
Confidence 2 222232 33467899998655554 44467888888887544333333 2344578899987544 45
Q ss_pred EEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEe
Q psy5792 251 WSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 296 (377)
Q Consensus 251 wtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd 296 (377)
.+-...++|.+-++....+...+........++++.|...+|.-+.
T Consensus 264 ~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 5666667899999876654433433455678999998655555444
No 184
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.69 E-value=0.067 Score=55.05 Aligned_cols=241 Identities=12% Similarity=0.087 Sum_probs=143.7
Q ss_pred CCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceecccc
Q psy5792 57 DAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGP 132 (377)
Q Consensus 57 ~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~ 132 (377)
......++++ .+..|..+. .++.|...+ .+|+....+..... +.++.+ +++.+
T Consensus 12 h~~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~-s~~~~--------------------- 68 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVTETPVRAGKF-IARKN--------------------- 68 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEE-EGGGT---------------------
T ss_pred CCCceEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecCCCcEEEEEE-eCCCC---------------------
Confidence 3445677777 334454443 456788888 66666555553333 444443 33322
Q ss_pred CCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEE
Q psy5792 133 LSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRT 212 (377)
Q Consensus 133 ~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~ 212 (377)
.|+.+.. .|.|+..++..... ...+ ......+..+++.+.+..|..+. ..+.|...
T Consensus 69 ------------------~l~~~~~-dg~i~vw~~~~~~~--~~~~--~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw 124 (814)
T 3mkq_A 69 ------------------WIIVGSD-DFRIRVFNYNTGEK--VVDF--EAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLW 124 (814)
T ss_dssp ------------------EEEEEET-TSEEEEEETTTCCE--EEEE--ECCSSCEEEEEECSSSSEEEEEE-TTSEEEEE
T ss_pred ------------------EEEEEeC-CCeEEEEECCCCcE--EEEE--ecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEE
Confidence 3444433 44688888765533 1111 12345588999998777777655 56888888
Q ss_pred EcCCC-CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE-EEEeeCCCCCceeEEEcC--C
Q psy5792 213 HRDGT-GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR-YVLISGGVDQPSALAVDP--E 288 (377)
Q Consensus 213 ~~~G~-~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp--~ 288 (377)
+++.. ....... ..-..+..+++.+..++++++-...+.|.+.++..... ..+..........++..| .
T Consensus 125 ~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 125 NWENNWALEQTFE-------GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EGGGTSEEEEEEE-------CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTT
T ss_pred ECCCCceEEEEEc-------CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCC
Confidence 88754 2223333 23345788898874566777767778999999876543 333333335678889987 5
Q ss_pred CCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 289 SGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 289 ~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
...|+.... ...|...++..................+++.+.+..|+ +-. ..+.|...+...+
T Consensus 198 ~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 198 KPYMITASD--DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII-SGS-EDGTLKIWNSSTY 260 (814)
T ss_dssp CCEEEEECT--TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE-EEE-TTSCEEEEETTTC
T ss_pred CCEEEEEeC--CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEe-CCCeEEEEECCCC
Confidence 556665543 46788877765443333333235567888876555444 444 4567777777644
No 185
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.66 E-value=0.034 Score=50.74 Aligned_cols=275 Identities=12% Similarity=0.042 Sum_probs=156.1
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-------EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-------VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-L 86 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-------~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~ 86 (377)
+.+.++++.+.++.+..+-+..+.|..-++.+. .+++. .+......+++ .++....+-..++.|...+ .
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~ 95 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK--GHSHIVQDCTLTADGAYALSASWDKTLRLWDVA 95 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe--CCcccEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 356778887766677777777788887776532 22332 34445677787 4455555656678888888 6
Q ss_pred CCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 87 DGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 87 ~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
+|+....+..... +..+.+ +++. .++++....+.|+..
T Consensus 96 ~~~~~~~~~~h~~~v~~~~~-~~~~----------------------------------------~~l~s~s~D~~i~vw 134 (319)
T 3frx_A 96 TGETYQRFVGHKSDVMSVDI-DKKA----------------------------------------SMIISGSRDKTIKVW 134 (319)
T ss_dssp TTEEEEEEECCSSCEEEEEE-CTTS----------------------------------------CEEEEEETTSCEEEE
T ss_pred CCCeeEEEccCCCcEEEEEE-cCCC----------------------------------------CEEEEEeCCCeEEEE
Confidence 6766555543333 444443 2221 133444333457777
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCC-----CEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceE
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAE-----DYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDI 240 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~-----~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~i 240 (377)
++.+... .........+..+.+.+.. +.++++-...+.|...++.......... .....+..+
T Consensus 135 d~~~~~~-----~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~~ 202 (319)
T 3frx_A 135 TIKGQCL-----ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-------GHNSNINTL 202 (319)
T ss_dssp ETTSCEE-----EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-------CCCSCEEEE
T ss_pred ECCCCeE-----EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-------CCCCcEEEE
Confidence 7765421 1111223345566665532 2345555567888888887533333232 234458889
Q ss_pred EEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecC
Q psy5792 241 AVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI 320 (377)
Q Consensus 241 avD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~ 320 (377)
++.+. +.+..+-...+.|.+-++........+.. ......+++.|...+|..+.. ..|...+++...........
T Consensus 203 ~~sp~-g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~---~~i~v~~~~~~~~~~~~~~~ 277 (319)
T 3frx_A 203 TASPD-GTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA---TGIKVFSLDPQYLVDDLRPE 277 (319)
T ss_dssp EECTT-SSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET---TEEEEEEETTEEEEEEECCC
T ss_pred EEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC---CCcEEEEeCcCeeeeccCcc
Confidence 99874 55556666678999999987655444443 356789999997666655542 34655666543322222111
Q ss_pred --------CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEc
Q psy5792 321 --------IMPIKDITLDRKNKRVYWCYSVGSNVLESMDY 352 (377)
Q Consensus 321 --------~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~ 352 (377)
-.....+++.+.++.|+-.. ..+.|..-++
T Consensus 278 ~~~~~~~~~~~v~~~~~spdg~~l~sg~--~Dg~i~vWd~ 315 (319)
T 3frx_A 278 FAGYSKAAEPHAVSLAWSADGQTLFAGY--TDNVIRVWQV 315 (319)
T ss_dssp CTTCCGGGCCCEEEEEECTTSSEEEEEE--TTSCEEEEEE
T ss_pred ccccccCcCcceeEEEECCCCCEEEEee--cCceEEEEEE
Confidence 12345678876655555443 4455544443
No 186
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.017 Score=54.10 Aligned_cols=241 Identities=10% Similarity=0.037 Sum_probs=138.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCC----c--EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEc-C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEV----K--VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSIN-L 86 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG----~--~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~-~ 86 (377)
..+.+++..+.+..|+.. ...+.|...+++. . ...+. ........+++. ++.++++-..++.|...+ .
T Consensus 68 ~~v~~~~~s~~~~~l~~~-~~dg~v~vw~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGA-LDNGSLELYSTNEANNAINSMARFS--NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp SCEEEEEECSSSSCEEEE-ESSSCEEEECCSSTTSCCCEEEECC--CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred CceEEEEECCCCCeEEEE-ccCCeEEEeecccccccccchhhcc--CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 356788888776666444 4467899988876 2 33332 344566788883 256666666677788777 4
Q ss_pred CCC------ceEEEe---cCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEe
Q psy5792 87 DGS------NSTVLR---NNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSV 156 (377)
Q Consensus 87 ~g~------~~~~~~---~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~ 156 (377)
+++ ....+. .... +..+.+ +++ ...++++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~---------------------------------------~~~~l~~~ 184 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAW-NQS---------------------------------------LAHVFASA 184 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEE-CSS---------------------------------------CTTEEEEE
T ss_pred CCccccccccccccccccCCCCCeeEEEe-CCC---------------------------------------CCcEEEEE
Confidence 443 111110 0000 112211 110 02245554
Q ss_pred CCCCeEEEEEcCCCCceeeEEEEecCC-----CCceEEEEEECCCCEEEEEEcCCC---cEEEEEcCCCC--cEEEEecc
Q psy5792 157 NSGYDIMGIKYNKNESKVTQVLGPLSK-----VSLAAKVDFHAAEDYIYWVDIDHG---TISRTHRDGTG--RENIIEYV 226 (377)
Q Consensus 157 ~~~~~I~~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~d~~~~~ly~sd~~~~---~I~~~~~~G~~--~~~i~~~~ 226 (377)
...+.|+..++..... ........ ...+..+++.+.+..++++-...+ .|...++.... ...+..
T Consensus 185 ~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~-- 259 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKE---VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ-- 259 (416)
T ss_dssp SSSSCEEEEETTTTEE---EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS--
T ss_pred cCCCCEEEEECCCCCc---ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec--
Confidence 4555688888876532 11111111 456889999987655555554555 88888886432 111110
Q ss_pred ccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 227 ETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
.....+.++++.+..++++.+-...++|.+.++........+........++++.|....++.+-. ....|...
T Consensus 260 -----~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-~d~~i~iw 333 (416)
T 2pm9_A 260 -----GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS-FDNKIEVQ 333 (416)
T ss_dssp -----CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC-SSSEEEEE
T ss_pred -----CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe-cCCcEEEE
Confidence 122357888888745666667666789999998765443334444556789999996635555543 24667666
Q ss_pred ecCC
Q psy5792 307 GLDG 310 (377)
Q Consensus 307 ~ldG 310 (377)
++..
T Consensus 334 ~~~~ 337 (416)
T 2pm9_A 334 TLQN 337 (416)
T ss_dssp ESCC
T ss_pred EccC
Confidence 6654
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.60 E-value=0.086 Score=53.88 Aligned_cols=182 Identities=10% Similarity=0.086 Sum_probs=109.3
Q ss_pred EEEEEcCCCCceeeEEE-EecCC-CCceEEEEEECCCCEEEEEEc-C---CCcEEEEEcCC------C--CcEEEEeccc
Q psy5792 162 IMGIKYNKNESKVTQVL-GPLSK-VSLAAKVDFHAAEDYIYWVDI-D---HGTISRTHRDG------T--GRENIIEYVE 227 (377)
Q Consensus 162 I~~~~l~~~~~~~~~~~-~~~~~-~~~~~~l~~d~~~~~ly~sd~-~---~~~I~~~~~~G------~--~~~~i~~~~~ 227 (377)
|+..++.+... ...+ ..... .....++++.+.+++|+++.. . ...|+.+++++ . ..+.+..
T Consensus 210 v~~~~l~t~~~--~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~--- 284 (710)
T 2xdw_A 210 LYYHVLGTDQS--EDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID--- 284 (710)
T ss_dssp EEEEETTSCGG--GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC---
T ss_pred EEEEECCCCcc--cceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC---
Confidence 77777765432 1122 22111 223678888888888888754 2 46899999874 2 2344443
Q ss_pred cCCCCCCCCcceEEEeccCCeEEEEcCC---CCEEEEEEcCCCe---EEEEeeCCC-CCceeEEEcCCCCeEEEEecC-C
Q psy5792 228 TGDPTPVDQFTDIAVDWIAQNIYWSDPK---ENVIEVARLTGQY---RYVLISGGV-DQPSALAVDPESGYLFWSESG-K 299 (377)
Q Consensus 228 ~~~~~~~~~p~~iavD~~~~~lYwtd~~---~~~I~~~~~~g~~---~~~l~~~~~-~~P~~iavdp~~g~lywtd~g-~ 299 (377)
...... -.+++.++.||+.... +.+|.+.++++.. .+.++...- ....++++.+ +++|+++-.. .
T Consensus 285 -----~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g 357 (710)
T 2xdw_A 285 -----NFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDV 357 (710)
T ss_dssp -----SSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETT
T ss_pred -----CCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECC
Confidence 222222 2455557888887432 4589999998753 245554322 2456777764 6777776532 2
Q ss_pred CCeEEEEec-CCCCeEEEEecCCCCceEEEEeCCCCEEEEEEe--CCCCeEEEEEccCCc
Q psy5792 300 IPLIARAGL-DGKKQTILAQEIIMPIKDITLDRKNKRVYWCYS--VGSNVLESMDYSGGS 356 (377)
Q Consensus 300 ~~~I~r~~l-dG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~--~~~~~i~~~~~~G~~ 356 (377)
..+|+..++ +|...+.+... .....+++.++.+.+|+++-. ....+|+.+++..+.
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 457888898 66644444322 344566777766678887644 145789999987655
No 188
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.57 E-value=0.053 Score=50.90 Aligned_cols=261 Identities=9% Similarity=-0.021 Sum_probs=150.4
Q ss_pred CccccccCCCCeEEEEeCCCCcEEEEEcCCc-EE--EEE-eCCCCCceEEEEEE--CCeEEEEcCCCCceEEEc-CCC--
Q psy5792 18 VASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VA--KVV-SMPDAAQVVAAVFY--KGRIIYSDANDGNIRSIN-LDG-- 88 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~--~i~-~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~-~~g-- 88 (377)
+..++.++....+.+.-+..+.|...+++.. .. .+. ...+.....++++. ++.++++-..++.|...+ .++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 3445555554445445567889999998654 21 110 01344557888883 566666666678888888 444
Q ss_pred -----CceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeE
Q psy5792 89 -----SNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDI 162 (377)
Q Consensus 89 -----~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I 162 (377)
+....+..... +..+.+ +++. ..++++....+.|
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~-~p~~---------------------------------------~~~l~s~~~dg~i 156 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAW-HPTA---------------------------------------QNVLLSAGCDNVI 156 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEE-CSSB---------------------------------------TTEEEEEETTSCE
T ss_pred ccccCCceEEecCCCCeEEEEEE-CcCC---------------------------------------CCEEEEEcCCCEE
Confidence 22333332222 334433 2221 1244444444468
Q ss_pred EEEEcCCCCceeeEEEEec---CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEE-eccccCCCCCCCCcc
Q psy5792 163 MGIKYNKNESKVTQVLGPL---SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENII-EYVETGDPTPVDQFT 238 (377)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~---~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~-~~~~~~~~~~~~~p~ 238 (377)
+..++..... +..+ .....+..+++.+.+..|+.+. ..+.|...++......... .. ..-..+.
T Consensus 157 ~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~ 224 (402)
T 2aq5_A 157 LVWDVGTGAA-----VLTLGPDVHPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRKGTVVAEKDRP------HEGTRPV 224 (402)
T ss_dssp EEEETTTTEE-----EEEECTTTCCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTTTEEEEEEECS------SCSSSCC
T ss_pred EEEECCCCCc-----cEEEecCCCCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCCCceeeeeccC------CCCCcce
Confidence 8888876522 2222 2345688999998666666554 5688999998743322222 20 1122367
Q ss_pred eEEEeccCCeEEEEc---CCCCEEEEEEcCCCeE--EEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC-
Q psy5792 239 DIAVDWIAQNIYWSD---PKENVIEVARLTGQYR--YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK- 312 (377)
Q Consensus 239 ~iavD~~~~~lYwtd---~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~- 312 (377)
.+++.+. +.++.+- ...+.|.+.++..... ..........+..++++|.+.+||.+-.. ...|...++....
T Consensus 225 ~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~-dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 225 HAVFVSE-GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG-DSSIRYFEITSEAP 302 (402)
T ss_dssp EEEECST-TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT-CSCEEEEEECSSTT
T ss_pred EEEEcCC-CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC-CCeEEEEEecCCCc
Confidence 8888864 5555554 5678899999876432 22221234567899999988899888643 4677777776544
Q ss_pred -eEEEEec-CCCCceEEEEeCC
Q psy5792 313 -QTILAQE-IIMPIKDITLDRK 332 (377)
Q Consensus 313 -~~~l~~~-~~~~P~glalD~~ 332 (377)
...+..- .-....++++.+.
T Consensus 303 ~~~~l~~~~~~~~v~~~~~sp~ 324 (402)
T 2aq5_A 303 FLHYLSMFSSKESQRGMGYMPK 324 (402)
T ss_dssp CEEEEEEECCSSCCSEEEECCG
T ss_pred ceEeecccccCCcccceEEecc
Confidence 3333321 1245677887654
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.52 E-value=0.042 Score=56.16 Aligned_cols=186 Identities=10% Similarity=0.072 Sum_probs=104.5
Q ss_pred EEEEEcCCCCceeeEEEEecCC-CCceEEEEEECCCCEEEEEEcCC---CcEEEEEcCCCCcEEEEeccccCCCCCCCCc
Q psy5792 162 IMGIKYNKNESKVTQVLGPLSK-VSLAAKVDFHAAEDYIYWVDIDH---GTISRTHRDGTGRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 162 I~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~d~~~~~ly~sd~~~---~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p 237 (377)
|+..++.+...+ ...+..... .....++.+.+.+++|+++.... ..|+.++..+...+.+.. .....
T Consensus 204 v~~~~l~t~~~~-~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~--------~~~~~ 274 (695)
T 2bkl_A 204 IRYHTLGTEPSK-DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK--------GVGAK 274 (695)
T ss_dssp EEEEETTSCGGG-CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE--------CSSCC
T ss_pred EEEEECCCCchh-ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec--------CCCce
Confidence 777787765320 012222212 13467888888888888765433 377777665445555554 22222
Q ss_pred ceEEEeccCCeEEEEcC---CCCEEEEEEcCCCe---EEEEeeCC-CCCceeEEEcCCCCeEEEEecC-CCCeEEEEecC
Q psy5792 238 TDIAVDWIAQNIYWSDP---KENVIEVARLTGQY---RYVLISGG-VDQPSALAVDPESGYLFWSESG-KIPLIARAGLD 309 (377)
Q Consensus 238 ~~iavD~~~~~lYwtd~---~~~~I~~~~~~g~~---~~~l~~~~-~~~P~~iavdp~~g~lywtd~g-~~~~I~r~~ld 309 (377)
...+. +.++ ||+... .+.+|.+.++++.. .+.++... .....++++. ++.|+++... ...+|+..+++
T Consensus 275 ~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 275 YEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp EEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETT
T ss_pred EEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC
Confidence 22222 3345 776533 35799999997654 24555432 2335677776 6777777532 24688888888
Q ss_pred CCCeEEEEecCCCCceEEEEeCCCCEEEEEEe--CCCCeEEEEEccCCceEEE
Q psy5792 310 GKKQTILAQEIIMPIKDITLDRKNKRVYWCYS--VGSNVLESMDYSGGSKMQL 360 (377)
Q Consensus 310 G~~~~~l~~~~~~~P~glalD~~~~~LYw~d~--~~~~~i~~~~~~G~~~~~~ 360 (377)
|...+.+.........+++.++.++.|+++-. ....+|+..++.++..+.+
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 76444432211223344555555567776544 0235788888886654443
No 190
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.48 E-value=0.18 Score=54.70 Aligned_cols=285 Identities=9% Similarity=0.068 Sum_probs=167.4
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
+.+.++++.+.+.+|... +..+.|...+.... ..++. .......++++ .++....+-..++.|...+ .+|+..
T Consensus 616 ~~v~~~~~s~~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASC-GADKTLQVFKAETGEKLLDIK--AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp SCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccEEEEEECCCCCEEEEE-eCCCeEEEEECCCCCEEEEec--cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 467788888877666444 46688999998666 55553 45566788888 3444444545667888888 677666
Q ss_pred EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 92 TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 92 ~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
..+..... +..+.+ +++. +..++++....+.|+..++...
T Consensus 693 ~~~~~~~~~v~~~~~-~~~~--------------------------------------~~~~l~sg~~d~~v~vwd~~~~ 733 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHF-TNKS--------------------------------------NHLLLATGSNDFFLKLWDLNQK 733 (1249)
T ss_dssp EEEECCSSCEEEEEE-CSSS--------------------------------------SCCEEEEEETTSCEEEEETTSS
T ss_pred EEEcCCCCcEEEEEE-ecCC--------------------------------------CceEEEEEeCCCeEEEEECCCc
Confidence 66654333 344433 2211 1234444444456888887765
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecccc------CCCCCCCCcceEEEec
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVET------GDPTPVDQFTDIAVDW 244 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~------~~~~~~~~p~~iavD~ 244 (377)
.. ... .......+.++++.+.+..|.... ..+.|...++.............. ........+..+++.+
T Consensus 734 ~~--~~~--~~~h~~~v~~~~~sp~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 808 (1249)
T 3sfz_A 734 EC--RNT--MFGHTNSVNHCRFSPDDELLASCS-ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA 808 (1249)
T ss_dssp SE--EEE--ECCCSSCEEEEEECSSTTEEEEEE-SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT
T ss_pred ch--hhe--ecCCCCCEEEEEEecCCCEEEEEE-CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC
Confidence 33 111 112344578899998666655544 567888888764322211110000 0000111366778887
Q ss_pred cCCeEEEEcCCCCEEEEEEcCCCeEE-EEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCC
Q psy5792 245 IAQNIYWSDPKENVIEVARLTGQYRY-VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMP 323 (377)
Q Consensus 245 ~~~~lYwtd~~~~~I~~~~~~g~~~~-~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~ 323 (377)
.+..+..+. .+.|...++...... .+..........+++.|....+..+.. ...|...+++..............
T Consensus 809 dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~h~~~ 884 (1249)
T 3sfz_A 809 DGDKIIVAA--KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS--QYCVELWNIDSRLKVADCRGHLSW 884 (1249)
T ss_dssp TSSEEEEEE--TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS--SSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCEEEEEc--CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceeeecCCCccc
Confidence 666666654 467888888765433 333344566789999997776666653 467777777755443333333456
Q ss_pred ceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 324 IKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 324 P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
..++++.+.+..|+.+ . ..+.|...+..
T Consensus 885 v~~v~~spdg~~l~s~-s-~dg~v~vw~~~ 912 (1249)
T 3sfz_A 885 VHGVMFSPDGSSFLTA-S-DDQTIRVWETK 912 (1249)
T ss_dssp EEEEEECTTSSEEEEE-E-TTSCEEEEEHH
T ss_pred eEEEEECCCCCEEEEE-e-CCCeEEEEEcc
Confidence 7889998765555544 4 45566555543
No 191
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.45 E-value=0.061 Score=48.71 Aligned_cols=234 Identities=12% Similarity=0.060 Sum_probs=133.1
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-----EEEEEeCCCCCceEEEEE-ECCe-EEEEcCCCCceEEEcC-
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-----VAKVVSMPDAAQVVAAVF-YKGR-IIYSDANDGNIRSINL- 86 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-----~~~i~~~~~~~~p~~lav-~~~~-ly~td~~~~~I~~~~~- 86 (377)
-+.+.+++..+.+..|+.. +..+.|...+++.. ...+. ........+++ .++. .+++-..++.|...+.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~-~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLIT-SWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEE-ETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CCcEEEEEEcCCCCEEEEE-cCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 3567788888876666444 45677888776543 22222 34456778888 3455 4444445678888886
Q ss_pred CCCceEEEec--CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEE
Q psy5792 87 DGSNSTVLRN--NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIM 163 (377)
Q Consensus 87 ~g~~~~~~~~--~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~ 163 (377)
.......+.. ... +..+.+. + . ..++.+. ..+.|+
T Consensus 88 ~~~~~~~~~~~~~~~~v~~l~~~-~-~---------------------------------------~~l~s~~-~d~~i~ 125 (342)
T 1yfq_A 88 GSPSFQALTNNEANLGICRICKY-G-D---------------------------------------DKLIAAS-WDGLIE 125 (342)
T ss_dssp SSSSEEECBSCCCCSCEEEEEEE-T-T---------------------------------------TEEEEEE-TTSEEE
T ss_pred cCCceEeccccCCCCceEEEEeC-C-C---------------------------------------CEEEEEc-CCCeEE
Confidence 6555544443 222 4444432 1 1 1233333 334577
Q ss_pred EEEcCC---------CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC-CC--cEEEEeccccCCC
Q psy5792 164 GIKYNK---------NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG-TG--RENIIEYVETGDP 231 (377)
Q Consensus 164 ~~~l~~---------~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G-~~--~~~i~~~~~~~~~ 231 (377)
..++.. ... +..+.....+.++++++. .++.. ...+.|...++.. .. ......
T Consensus 126 iwd~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~--~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~------- 190 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLN-----SNNTKVKNKIFTMDTNSS--RLIVG-MNNSQVQWFRLPLCEDDNGTIEES------- 190 (342)
T ss_dssp EECHHHHTTBCEEEEESC-----SSSSSSCCCEEEEEECSS--EEEEE-ESTTEEEEEESSCCTTCCCEEEEC-------
T ss_pred EEcccccccccccccCCe-----eeEEeeCCceEEEEecCC--cEEEE-eCCCeEEEEECCccccccceeeec-------
Confidence 776643 211 111223345788888753 35544 4567888888875 22 222222
Q ss_pred CCCCCcceEEEec-cCCeEEEEcCCCCEEEEEEcCCC------eEEEEeeCCC---------CCceeEEEcCCCCeEEEE
Q psy5792 232 TPVDQFTDIAVDW-IAQNIYWSDPKENVIEVARLTGQ------YRYVLISGGV---------DQPSALAVDPESGYLFWS 295 (377)
Q Consensus 232 ~~~~~p~~iavD~-~~~~lYwtd~~~~~I~~~~~~g~------~~~~l~~~~~---------~~P~~iavdp~~g~lywt 295 (377)
..-..+..+++.+ .+ +++++-...+.|.+.+++.. .....+.... .....++++|...+|+..
T Consensus 191 ~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 191 GLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp SCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred CCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 2233578888886 44 45555555778888776654 2222233222 267899999976677666
Q ss_pred ecCCCCeEEEEecCCC
Q psy5792 296 ESGKIPLIARAGLDGK 311 (377)
Q Consensus 296 d~g~~~~I~r~~ldG~ 311 (377)
.. ...|...++...
T Consensus 270 ~~--dg~i~vwd~~~~ 283 (342)
T 1yfq_A 270 GS--DGIISCWNLQTR 283 (342)
T ss_dssp ET--TSCEEEEETTTT
T ss_pred cC--CceEEEEcCccH
Confidence 53 467877777643
No 192
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.44 E-value=0.073 Score=49.36 Aligned_cols=283 Identities=10% Similarity=0.003 Sum_probs=152.7
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEe-CCCCCceEEEEEEC--CeEEEEcCCCCceEEEcCCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVS-MPDAAQVVAAVFYK--GRIIYSDANDGNIRSINLDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~-~~~~~~p~~lav~~--~~ly~td~~~~~I~~~~~~g~~~ 91 (377)
..+.+++..+.+++++.+-+..+.|...++++. ...... ........++++.. +.++++-..++.|...+..+...
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI 153 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce
Confidence 467788888887456666667889999999877 444432 13455678888854 35556656677888888555554
Q ss_pred EEEecCC---C-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEc
Q psy5792 92 TVLRNNA---G-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKY 167 (377)
Q Consensus 92 ~~~~~~~---~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l 167 (377)
..+.... . +..+.+ +++. .+++.+. ..+.|+..++
T Consensus 154 ~~~~~~~~~~~~v~~~~~-~~~~---------------------------------------~~l~~~~-~d~~i~i~d~ 192 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDV-SVSR---------------------------------------QMLATGD-STGRLLLLGL 192 (383)
T ss_dssp EEEECCCCSSCCEEEEEE-ETTT---------------------------------------TEEEEEE-TTSEEEEEET
T ss_pred EEEeccCCCCCCeEEEEE-CCCC---------------------------------------CEEEEEC-CCCCEEEEEC
Confidence 4443221 1 333332 2221 2344433 3346888888
Q ss_pred CCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC--cEEEEeccccCCCCCCCCcceEEEecc
Q psy5792 168 NKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG--RENIIEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~--~~~i~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
.+... .. .......+.++++.+.+..++++-...+.|...++.... .+.+... .....+.++++++.
T Consensus 193 ~~~~~---~~--~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~s~~ 261 (383)
T 3ei3_B 193 DGHEI---FK--EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM------PHEKPVNAAYFNPT 261 (383)
T ss_dssp TSCEE---EE--EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE------ECSSCEEEEEECTT
T ss_pred CCCEE---EE--eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe------cCCCceEEEEEcCC
Confidence 54322 11 112345688999998776456665567888888886311 1121110 12346889999973
Q ss_pred CCeEEEEcCCCCEEEEEEcCCCe-EEEEeeCC-----CCCceeEEEcCCCCeEEEEe-------cCCCCeEEEEecCCCC
Q psy5792 246 AQNIYWSDPKENVIEVARLTGQY-RYVLISGG-----VDQPSALAVDPESGYLFWSE-------SGKIPLIARAGLDGKK 312 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~~g~~-~~~l~~~~-----~~~P~~iavdp~~g~lywtd-------~g~~~~I~r~~ldG~~ 312 (377)
.+.++++-...++|.+.++.... ...+.... ...+...+.+|....+..+- .+....|...++....
T Consensus 262 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 262 DSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGG 341 (383)
T ss_dssp TSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCC
T ss_pred CCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCc
Confidence 44455555566899999987532 22332210 11122223333222222221 1124667777765333
Q ss_pred -eEEEEecC-CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 313 -QTILAQEI-IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 313 -~~~l~~~~-~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
...+.... -.....+++.+.+..|..+ . .+.|..-+++
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s--d~~i~iw~~~ 381 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGDVLASG-M--GFNILIWNRE 381 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSSEEEEE-E--TTEEEEEECC
T ss_pred eeeeecCCCCCceEEEEEEecCccEEEEe-c--CCcEEEEecC
Confidence 33332211 1234455777655555444 3 2455554443
No 193
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.44 E-value=0.11 Score=53.32 Aligned_cols=168 Identities=11% Similarity=0.071 Sum_probs=92.9
Q ss_pred eEEEEEECCCCEE-EEEEcCCC--cEEEEEcCCCC-------cEEEEeccccCCCCCCC--CcceEEEeccCCeEE-EEc
Q psy5792 187 AAKVDFHAAEDYI-YWVDIDHG--TISRTHRDGTG-------RENIIEYVETGDPTPVD--QFTDIAVDWIAQNIY-WSD 253 (377)
Q Consensus 187 ~~~l~~d~~~~~l-y~sd~~~~--~I~~~~~~G~~-------~~~i~~~~~~~~~~~~~--~p~~iavD~~~~~lY-wtd 253 (377)
...+++.+.++.+ ++.+...+ .|+.+++++.. ...+.. ......+. .+...++.+.++.|+ |..
T Consensus 262 ~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~---~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE---MSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE---ECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee---ccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 5566777655533 34444332 68888877544 222221 00001111 134667777666665 653
Q ss_pred C--CCCEEEEEEcCCCeEEEEeeCCCCCcee-EEEcCCCCeEEEEecC-----CCCeEEEEecCCCCeEEEEecCC----
Q psy5792 254 P--KENVIEVARLTGQYRYVLISGGVDQPSA-LAVDPESGYLFWSESG-----KIPLIARAGLDGKKQTILAQEII---- 321 (377)
Q Consensus 254 ~--~~~~I~~~~~~g~~~~~l~~~~~~~P~~-iavdp~~g~lywtd~g-----~~~~I~r~~ldG~~~~~l~~~~~---- 321 (377)
. +...|+..+++|...+.|..... .... ...| ++.||++... ....|++++++|...+..++..+
T Consensus 339 ~~~G~~~l~~~~~~~~~~~~lT~g~~-~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~ 415 (740)
T 4a5s_A 339 NEEGYRHICYFQIDKKDCTFITKGTW-EVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPER 415 (740)
T ss_dssp CTTSCEEEEEEETTCSSCEESCCSSS-CEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTT
T ss_pred cCCCceEEEEEECCCCceEecccCCE-EEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCC
Confidence 2 34589999999987766665432 2333 3355 7899998753 13689999999876654444221
Q ss_pred CCceEEEEeCCCCEEEEEEeC-CCCeEEEEEccCCceEEE
Q psy5792 322 MPIKDITLDRKNKRVYWCYSV-GSNVLESMDYSGGSKMQL 360 (377)
Q Consensus 322 ~~P~glalD~~~~~LYw~d~~-~~~~i~~~~~~G~~~~~~ 360 (377)
......++.+..+.+...-.. ....+..++.+++....+
T Consensus 416 ~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~ 455 (740)
T 4a5s_A 416 CQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV 455 (740)
T ss_dssp BCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEE
Confidence 234456776655554444330 223566666664433333
No 194
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.44 E-value=0.071 Score=48.98 Aligned_cols=276 Identities=8% Similarity=0.018 Sum_probs=146.8
Q ss_pred CCccccc-----cCCCCeEEEEeCCCCcEEEEEcCC--------c-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCce
Q psy5792 17 AVASTLK-----PQSGPFVYGVKTLSHSLHYVNIEV--------K-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNI 81 (377)
Q Consensus 17 ~~~~~~~-----d~~~~~ly~~d~~~~~I~~~~~dG--------~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I 81 (377)
.+.+++. .+.++.+..+-+..+.|..-++.. . ..++. ........+++ .++.+.++-..++.|
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~--~h~~~V~~~~~~~~~~~l~s~s~D~~v 100 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT--GHNHFVSDLALSQENCFAISSSWDKTL 100 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC--CCSSCEEEEEECSSTTEEEEEETTSEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc--cCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 3455655 332445556666677788877642 2 33332 44445677888 445566666677888
Q ss_pred EEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCC
Q psy5792 82 RSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSG 159 (377)
Q Consensus 82 ~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~ 159 (377)
...+ .+|+....+..... +..+.+ +++.. .| ++....
T Consensus 101 ~lwd~~~~~~~~~~~~h~~~v~~v~~-sp~~~---------------------------------------~l-~s~~~d 139 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQSEVYSVAF-SPDNR---------------------------------------QI-LSAGAE 139 (343)
T ss_dssp EEEETTSSCEEEEEECCCSCEEEEEE-CSSTT---------------------------------------EE-EEEETT
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEE-CCCCC---------------------------------------EE-EEEcCC
Confidence 8888 66766655554333 555554 33222 23 333333
Q ss_pred CeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCC---------EEEEEEcCCCcEEEEEcCCCCcEEEEeccccC
Q psy5792 160 YDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAED---------YIYWVDIDHGTISRTHRDGTGRENIIEYVETG 229 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~---------~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~ 229 (377)
+.|+..++.+... ...... .....+..+++.+... .++.+-...+.|...+.++.....+ .
T Consensus 140 ~~i~~wd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~----- 210 (343)
T 2xzm_R 140 REIKLWNILGECK---FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF-K----- 210 (343)
T ss_dssp SCEEEEESSSCEE---EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE-E-----
T ss_pred CEEEEEeccCCce---eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE-c-----
Confidence 4577777764311 000000 1223366777766431 3444444667888777554222222 2
Q ss_pred CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC-CCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 230 DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT-GQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~-g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
..-..+..+++.+. +.+..+-...++|...++. .......... ......++++|....|.... ...|...++
T Consensus 211 --~h~~~v~~~~~s~~-g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~~~v~~v~~sp~~~~la~~~---d~~v~iw~~ 283 (343)
T 2xzm_R 211 --AHESNVNHLSISPN-GKYIATGGKDKKLLIWDILNLTYPQREFDA-GSTINQIAFNPKLQWVAVGT---DQGVKIFNL 283 (343)
T ss_dssp --CCSSCEEEEEECTT-SSEEEEEETTCEEEEEESSCCSSCSEEEEC-SSCEEEEEECSSSCEEEEEE---SSCEEEEES
T ss_pred --CccccceEEEECCC-CCEEEEEcCCCeEEEEECCCCcccceeecC-CCcEEEEEECCCCCEEEEEC---CCCEEEEEe
Confidence 23345888999874 4555666667889998883 3322222222 23478999999655554333 234555555
Q ss_pred CCCCe-E--EEEe----------cCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 309 DGKKQ-T--ILAQ----------EIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 309 dG~~~-~--~l~~----------~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
..... . .+.. ........+++++.+..|+... ..+.|...+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~--~Dg~v~~w~~~ 339 (343)
T 2xzm_R 284 MTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF--TDGVIRTFSFE 339 (343)
T ss_dssp SSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE--TTSEEEEEEEE
T ss_pred CCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec--CCceEEEEEEE
Confidence 43221 1 1110 0012346788876655555443 45666555443
No 195
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.43 E-value=0.081 Score=49.56 Aligned_cols=283 Identities=11% Similarity=0.078 Sum_probs=152.4
Q ss_pred CcCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 15 FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 15 ~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
+..++++++++.+.+|+.... .+.|...++... ....+ ... ....+.+ .++.++++-..++.|...+ ..++.
T Consensus 56 ~~~~~~~~~s~~g~~l~~~~~-d~~v~i~d~~~~~~~~~~--~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 56 VDAGKGNTFEKVGSHLYKARL-DGHDFLFNTIIRDGSKML--KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp CBCCTTCEEEEEETTEEEEEE-TTEEEEEECCSEETTTTS--CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE
T ss_pred cccccceeeeecCCeEEEEEc-CCcEEEEEecccceeeEE--ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce
Confidence 445678888888888766544 467888887665 22111 111 2333333 3444555555667788888 44433
Q ss_pred eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCC
Q psy5792 91 STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNK 169 (377)
Q Consensus 91 ~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~ 169 (377)
...+..... +..+++ +++. . ++++....+.|+..++..
T Consensus 132 ~~~~~~h~~~v~~~~~-~~~~---------------------------------------~-~l~s~s~d~~i~iwd~~~ 170 (420)
T 3vl1_A 132 REIDQAHVSEITKLKF-FPSG---------------------------------------E-ALISSSQDMQLKIWSVKD 170 (420)
T ss_dssp EEETTSSSSCEEEEEE-CTTS---------------------------------------S-EEEEEETTSEEEEEETTT
T ss_pred eeecccccCccEEEEE-CCCC---------------------------------------C-EEEEEeCCCeEEEEeCCC
Confidence 333322222 444443 2221 1 333333344688888875
Q ss_pred CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCC-----------------
Q psy5792 170 NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPT----------------- 232 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~----------------- 232 (377)
... ...+ ......+.++++.+.+..|+.+. ..+.|...++.............. ...
T Consensus 171 ~~~--~~~~--~~h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 171 GSN--PRTL--IGHRATVTDIAIIDRGRNVLSAS-LDGTIRLWECGTGTTIHTFNRKEN-PHDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp CCC--CEEE--ECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTEEEEEECBTTB-TTCCEEEEEEEECCCSSCGG
T ss_pred CcC--ceEE--cCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEeECCCCceeEEeecCCC-CCCCccEEEEecCCcceeee
Confidence 533 1111 12345588999998777776554 567888888764332222210000 000
Q ss_pred -CCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEE-EEeeCCCCCceeEEEcCCCC-eEEEEecCCCCeEEEEecC
Q psy5792 233 -PVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRY-VLISGGVDQPSALAVDPESG-YLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 233 -~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~-~l~~~~~~~P~~iavdp~~g-~lywtd~g~~~~I~r~~ld 309 (377)
.......+++++ .+++.++-...+.|.+.++...... .+..........++++|... +|+.... ...|...++.
T Consensus 245 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~--dg~i~vwd~~ 321 (420)
T 3vl1_A 245 ISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE--NGMLAQWDLR 321 (420)
T ss_dssp GCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET--TSEEEEEETT
T ss_pred cccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC--CCeEEEEEcC
Confidence 012233444554 3445555556678999998765433 33332345678999999766 5555542 4788888886
Q ss_pred CC-C-eEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 310 GK-K-QTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 310 G~-~-~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
.. . ...+....-.....+... .++++.+-. ..+.|...++..
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~-~d~~v~iw~~~~ 365 (420)
T 3vl1_A 322 SPECPVGEFLINEGTPINNVYFA--AGALFVSSG-FDTSIKLDIISD 365 (420)
T ss_dssp CTTSCSEEEEESTTSCEEEEEEE--TTEEEEEET-TTEEEEEEEECC
T ss_pred CCcCchhhhhccCCCCceEEEeC--CCCEEEEec-CCccEEEEeccC
Confidence 53 2 334433222334455543 456666665 666776666553
No 196
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.41 E-value=0.075 Score=48.68 Aligned_cols=242 Identities=9% Similarity=-0.049 Sum_probs=130.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEe-CCCCCceEEEEEE-CCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVS-MPDAAQVVAAVFY-KGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~-~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
+.+.++++.+.+..|+ +-...+.|...++++. .+.+.. .........+++. ++.++++-..++.|...+ .+++..
T Consensus 9 ~~i~~~~~s~~~~~l~-~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIA-ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp SCCCEEEECTTSSEEE-EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCeEEEEECCCCCEEE-EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 3567888888766554 4445788999998776 322211 1344567888884 344444444567788888 444433
Q ss_pred EEEe--cCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 92 TVLR--NNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 92 ~~~~--~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
..+. .... +..+.+ +++. .+++.+.. .+.|+..+++
T Consensus 88 ~~~~~~~~~~~v~~~~~-~~~~---------------------------------------~~l~~~~~-d~~v~i~d~~ 126 (372)
T 1k8k_C 88 PTLVILRINRAARCVRW-APNE---------------------------------------KKFAVGSG-SRVISICYFE 126 (372)
T ss_dssp EEEECCCCSSCEEEEEE-CTTS---------------------------------------SEEEEEET-TSSEEEEEEE
T ss_pred eeEEeecCCCceeEEEE-CCCC---------------------------------------CEEEEEeC-CCEEEEEEec
Confidence 2221 1111 333332 2211 13444443 2357777766
Q ss_pred CCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC----------------CCcEEEEeccccCCCC
Q psy5792 169 KNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG----------------TGRENIIEYVETGDPT 232 (377)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G----------------~~~~~i~~~~~~~~~~ 232 (377)
..................+..+++.+.+..|+... ..+.|...++.. ...+.+... ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 200 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-----SS 200 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-----CC
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEec-----CC
Confidence 54320001111122245688999998666665554 567888887531 011122110 02
Q ss_pred CCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5792 233 PVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAG 307 (377)
Q Consensus 233 ~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ 307 (377)
....+.++++.+.+..| ++-...+.|.+.++........+.........++++|.+.+|... ....-+|+...
T Consensus 201 ~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 201 SCGWVHGVCFSANGSRV-AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp CSSCEEEEEECSSSSEE-EEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEE
T ss_pred CCCeEEEEEECCCCCEE-EEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEcc
Confidence 23357889998755444 555566889999996544333334444457899999855444444 32233444443
No 197
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.075 Score=48.66 Aligned_cols=181 Identities=11% Similarity=0.071 Sum_probs=103.4
Q ss_pred CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECC--CCEEEEEEcCCCcEEEEEcCCCC--cEEEEeccccCCCCCC
Q psy5792 159 GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAA--EDYIYWVDIDHGTISRTHRDGTG--RENIIEYVETGDPTPV 234 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~--~~~ly~sd~~~~~I~~~~~~G~~--~~~i~~~~~~~~~~~~ 234 (377)
.|.|+..++..... ............+..+++.+. +..|+.+. ..+.|...++.... ...... ...
T Consensus 78 dg~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~-------~~~ 147 (379)
T 3jrp_A 78 DGKVLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENGTTSPIIID-------AHA 147 (379)
T ss_dssp TSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCTTSCCCEEEEE-------CCT
T ss_pred CCEEEEEEcCCCce--eEeeeecCCCcceEEEEeCCCCCCCEEEEec-CCCcEEEEecCCCCceeeEEec-------CCC
Confidence 34587777766532 111222223456889999886 55555554 57888888886542 222232 234
Q ss_pred CCcceEEEecc------------CCeEEEEcCCCCEEEEEEcCCCe-EE---EEeeCCCCCceeEEEcCC---CCeEEEE
Q psy5792 235 DQFTDIAVDWI------------AQNIYWSDPKENVIEVARLTGQY-RY---VLISGGVDQPSALAVDPE---SGYLFWS 295 (377)
Q Consensus 235 ~~p~~iavD~~------------~~~lYwtd~~~~~I~~~~~~g~~-~~---~l~~~~~~~P~~iavdp~---~g~lywt 295 (377)
..+..+++.+. .+.++.+-...+.|.+.++.... .. ..+........+++++|. ..+|+.+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 45778888864 35666666666788888876432 11 122233455789999997 4445444
Q ss_pred ecCCCCeEEEEecCCCC---eEEEEec--CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 296 ESGKIPLIARAGLDGKK---QTILAQE--IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 296 d~g~~~~I~r~~ldG~~---~~~l~~~--~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.. ...|...++.... ...+... .-.....+++.+.+..|+.+.. .+.|...+++
T Consensus 228 ~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~iw~~~ 286 (379)
T 3jrp_A 228 SQ--DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKEN 286 (379)
T ss_dssp ET--TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES--SSSEEEEEEE
T ss_pred eC--CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC--CCcEEEEeCC
Confidence 43 3566666655432 2232222 1234677888876666665544 4555555554
No 198
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.066 Score=47.63 Aligned_cols=271 Identities=10% Similarity=0.039 Sum_probs=149.8
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCC---
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGS--- 89 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~--- 89 (377)
+.+.+++. +.+++| .+-+..+.|...++++. ...... ........+++ .++.+.++-..++.|...+ .+..
T Consensus 19 ~~v~~~~~-~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 19 QDVRDVVA-VDDSKV-ASVSRDGTVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp SCEEEEEE-EETTEE-EEEETTSEEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred CCcEEEEe-cCCCEE-EEEEcCCcEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 35667777 544454 45566788999998777 333331 34556778888 3344444444566676666 3322
Q ss_pred ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 90 NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 90 ~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
....+..... +..+.. + ..+++.+.. .+.|+..+ .
T Consensus 96 ~~~~~~~~~~~i~~~~~-~-----------------------------------------~~~l~~~~~-d~~i~~~d-~ 131 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSF-Q-----------------------------------------DGVVISGSW-DKTAKVWK-E 131 (313)
T ss_dssp C-CEECCCSSCEEEEEE-E-----------------------------------------TTEEEEEET-TSEEEEEE-T
T ss_pred cccchhhcccCEEEEEe-c-----------------------------------------CCEEEEEeC-CCCEEEEc-C
Confidence 1222222111 233332 1 012333333 33566666 1
Q ss_pred CCCceeeEEEEecCCCCceEEEEEEC-CCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCC
Q psy5792 169 KNESKVTQVLGPLSKVSLAAKVDFHA-AEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQ 247 (377)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~d~-~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~ 247 (377)
+. ...........+..+++.+ ..+.++.. ...+.|...+.. ........ ..-..+..+++.+. +
T Consensus 132 ~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i~i~d~~--~~~~~~~~------~~~~~i~~~~~~~~-~ 196 (313)
T 3odt_A 132 GS-----LVYNLQAHNASVWDAKVVSFSENKFLTA-SADKTIKLWQND--KVIKTFSG------IHNDVVRHLAVVDD-G 196 (313)
T ss_dssp TE-----EEEEEECCSSCEEEEEEEETTTTEEEEE-ETTSCEEEEETT--EEEEEECS------SCSSCEEEEEEEET-T
T ss_pred Cc-----EEEecccCCCceeEEEEccCCCCEEEEE-ECCCCEEEEecC--ceEEEEec------cCcccEEEEEEcCC-C
Confidence 11 1111112334567787776 44555444 456788877732 11222220 13345778888854 4
Q ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEE
Q psy5792 248 NIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDI 327 (377)
Q Consensus 248 ~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~gl 327 (377)
. +++-...+.|.+.++........+........+++++|. +.|+... ....|...++........+.........+
T Consensus 197 ~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~i~~~ 272 (313)
T 3odt_A 197 H-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN-GDIVSCG--EDRTVRIWSKENGSLKQVITLPAISIWSV 272 (313)
T ss_dssp E-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SCEEEEE--TTSEEEEECTTTCCEEEEEECSSSCEEEE
T ss_pred e-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC-CCEEEEe--cCCEEEEEECCCCceeEEEeccCceEEEE
Confidence 4 556666789999999855443334444566799999985 4655554 35788888876554443344333466788
Q ss_pred EEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 328 TLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 328 alD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
++.+.+ ++. +-. ..+.|...+++.+
T Consensus 273 ~~~~~~-~~~-~~~-~dg~i~iw~~~~~ 297 (313)
T 3odt_A 273 DCMSNG-DII-VGS-SDNLVRIFSQEKS 297 (313)
T ss_dssp EECTTS-CEE-EEE-TTSCEEEEESCGG
T ss_pred EEccCC-CEE-EEe-CCCcEEEEeCCCC
Confidence 887654 443 445 6778888887744
No 199
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.35 E-value=0.17 Score=51.47 Aligned_cols=237 Identities=13% Similarity=0.064 Sum_probs=139.2
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCC------c-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEV------K-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-L 86 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG------~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~ 86 (377)
+.+.+++..+.+..+..+-+..+.|..-+++. . .+.+. .+......+++ .++.+..+-..++.|+..+ .
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~--~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT--GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA 460 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec--CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 35678888887777878888888898888753 2 33443 44556677888 4555566666678888888 6
Q ss_pred CCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 87 DGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 87 ~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
+|.....+..... +.++.+ +++.. .|+ +....+.|+..
T Consensus 461 ~~~~~~~~~~h~~~v~~~~~-s~~~~---------------------------------------~l~-s~s~D~~i~iw 499 (694)
T 3dm0_A 461 AGVSTRRFVGHTKDVLSVAF-SLDNR---------------------------------------QIV-SASRDRTIKLW 499 (694)
T ss_dssp TTEEEEEEECCSSCEEEEEE-CTTSS---------------------------------------CEE-EEETTSCEEEE
T ss_pred CCcceeEEeCCCCCEEEEEE-eCCCC---------------------------------------EEE-EEeCCCEEEEE
Confidence 6666555543333 445443 22221 232 22222346666
Q ss_pred EcCCCCceeeEEEEec---CCCCceEEEEEECCC-CEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEE
Q psy5792 166 KYNKNESKVTQVLGPL---SKVSLAAKVDFHAAE-DYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIA 241 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~---~~~~~~~~l~~d~~~-~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~ia 241 (377)
+..+... ..... .....+..+++.+.. ..++.+-...+.|...++.......... .....+..++
T Consensus 500 d~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-------~h~~~v~~v~ 568 (694)
T 3dm0_A 500 NTLGECK----YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-------GHTGYVSTVA 568 (694)
T ss_dssp CTTSCEE----EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEE
T ss_pred ECCCCcc----eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-------CCCCCEEEEE
Confidence 5543311 11111 112236788887754 2345555567888888887544433333 3345688999
Q ss_pred EeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCC
Q psy5792 242 VDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGK 311 (377)
Q Consensus 242 vD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~ 311 (377)
+.+. +++..+-...++|.+-++....+...+. .-.....+++.|.+..|.-+. ...|...++...
T Consensus 569 ~spd-g~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~---~~~i~iwd~~~~ 633 (694)
T 3dm0_A 569 VSPD-GSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLCAAT---EHGIKIWDLESK 633 (694)
T ss_dssp ECTT-SSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEEEEE---TTEEEEEETTTT
T ss_pred EeCC-CCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEEEEc---CCCEEEEECCCC
Confidence 9874 5566676667889999987654322222 234568899998544444333 234666665543
No 200
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.35 E-value=0.0032 Score=62.41 Aligned_cols=115 Identities=12% Similarity=0.122 Sum_probs=81.2
Q ss_pred CCCCceEEEEEECCCCEEEEEEcC---------------------CCcEEEEEcCCCC-------cEEEEeccccC----
Q psy5792 182 SKVSLAAKVDFHAAEDYIYWVDID---------------------HGTISRTHRDGTG-------RENIIEYVETG---- 229 (377)
Q Consensus 182 ~~~~~~~~l~~d~~~~~ly~sd~~---------------------~~~I~~~~~~G~~-------~~~i~~~~~~~---- 229 (377)
+.+.+|..+++++.++.||++-.+ .|.|+++..++.. .+.++......
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 345679999999999999998432 2789999986532 23333211110
Q ss_pred ----------CCCCCCCcceEEEeccCCeEEE-EcCC-----------CCEEEEEEcCCCeEEEEeeC-CCCCceeEEEc
Q psy5792 230 ----------DPTPVDQFTDIAVDWIAQNIYW-SDPK-----------ENVIEVARLTGQYRYVLISG-GVDQPSALAVD 286 (377)
Q Consensus 230 ----------~~~~~~~p~~iavD~~~~~lYw-td~~-----------~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavd 286 (377)
....+..|.+|++|. .++||+ ||.. ++.+++.+.+....+.++.. ....|.|+++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 012477899999996 689999 8864 34899999864444444443 35689999999
Q ss_pred CCCCeEEEEec
Q psy5792 287 PESGYLFWSES 297 (377)
Q Consensus 287 p~~g~lywtd~ 297 (377)
|....||++-.
T Consensus 540 PD~ktLfV~vQ 550 (592)
T 4a9v_A 540 PDQKTLFVGIQ 550 (592)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999975
No 201
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.34 E-value=0.08 Score=47.60 Aligned_cols=225 Identities=11% Similarity=0.052 Sum_probs=132.1
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNST 92 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~ 92 (377)
.+.+++..+.+..|+ +-+..+.|...|+... ..++. ........+++ .++.++++-..++.|...+ .+++...
T Consensus 67 ~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 67 GISDVAWSSDSNLLV-SASDDKTLKIWDVSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 143 (312)
T ss_dssp CEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred ceEEEEEcCCCCEEE-EECCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE
Confidence 566788887665554 4455678888888655 55553 44555677777 3445555555667888888 5666555
Q ss_pred EEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCC
Q psy5792 93 VLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNE 171 (377)
Q Consensus 93 ~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~ 171 (377)
.+..... +..+.+ +++.. +++ +....+.|+..++....
T Consensus 144 ~~~~~~~~v~~~~~-~~~~~---------------------------------------~l~-~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 144 TLPAHSDPVSAVHF-NRDGS---------------------------------------LIV-SSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp EECCCSSCEEEEEE-CTTSS---------------------------------------EEE-EEETTSCEEEEETTTCC
T ss_pred EecCCCCcEEEEEE-cCCCC---------------------------------------EEE-EEeCCCcEEEEECCCCc
Confidence 5543323 333332 22211 233 33333458888876553
Q ss_pred ceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCC--cceEEEeccCCeE
Q psy5792 172 SKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQ--FTDIAVDWIAQNI 249 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~--p~~iavD~~~~~l 249 (377)
. .. ............+++++.+..|..+. ..+.|...++.......... ..... .....+....+.+
T Consensus 183 ~--~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 183 C--LK-TLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDYSKGKCLKTYT-------GHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp E--EE-EECCSSCCCEEEEEECTTSSEEEEEE-TTTEEEEEETTTTEEEEEEC-------SSCCSSSCCCEEEECSSSCE
T ss_pred e--ee-EEeccCCCceEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEE-------ecCCceEEEEEEEEeCCCcE
Confidence 2 11 11112233467788998777766655 56788888886433222222 11111 2223344446777
Q ss_pred EEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEe
Q psy5792 250 YWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 296 (377)
Q Consensus 250 Ywtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd 296 (377)
+.+-...+.|.+.++........+.........++.+|....|.-+.
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 77877788999999987655444444456678999999766666554
No 202
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.32 E-value=0.1 Score=48.30 Aligned_cols=246 Identities=10% Similarity=0.006 Sum_probs=134.6
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEE----CCeEEEEcCCCCceEEEc-CCCC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFY----KGRIIYSDANDGNIRSIN-LDGS 89 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~----~~~ly~td~~~~~I~~~~-~~g~ 89 (377)
..+.+++..+.++.++++-+..+.|...+++.. ..... ........+++. ++.++++-..++.|...+ .+++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 467778888756666667677889999999887 44444 334455666662 333555555667888888 5666
Q ss_pred ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 90 NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 90 ~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
....+..... +..+.+ +++. ..++++....|.|+..++.
T Consensus 178 ~~~~~~~~~~~v~~~~~-~~~~---------------------------------------~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 178 CSHILQGHRQEILAVSW-SPRY---------------------------------------DYILATASADSRVKLWDVR 217 (408)
T ss_dssp CCEEECCCCSCEEEEEE-CSSC---------------------------------------TTEEEEEETTSCEEEEETT
T ss_pred eeeeecCCCCcEEEEEE-CCCC---------------------------------------CcEEEEEcCCCcEEEEECC
Confidence 6655553333 444443 2221 1244444344458877775
Q ss_pred CCCceeeEEEE------------e-cCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCC
Q psy5792 169 KNESKVTQVLG------------P-LSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVD 235 (377)
Q Consensus 169 ~~~~~~~~~~~------------~-~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~ 235 (377)
..... ...+. . ......+..+++.+.+..|+... ..+.|...++........... . ......
T Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~--~-~~~~~~ 292 (408)
T 4a11_B 218 RASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNGENTLVNYG--K-VCNNSK 292 (408)
T ss_dssp CSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCBCCCCCC--C-CCCCCS
T ss_pred CCCcc-cccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCCCccceeccc--c-cccccc
Confidence 43210 00000 0 11234578999998766776665 567888888874332111110 0 000011
Q ss_pred CcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 236 QFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 236 ~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
....+.+.......+.+-...+.|.+.++........+........+++++|...+|+-+.. .+.|...+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~iw~~~~ 365 (408)
T 4a11_B 293 KGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR--DCNILAWVPSL 365 (408)
T ss_dssp SCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEET--TSCEEEEEECC
T ss_pred ccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECC--CCeEEEEeCCC
Confidence 11122222122222222233468888888765544444444556789999997666666653 35666665553
No 203
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.32 E-value=0.15 Score=50.21 Aligned_cols=280 Identities=10% Similarity=-0.038 Sum_probs=157.5
Q ss_pred cCCCCcCCccccccCCCCeEEEEeCCCCcEEEEEcC-C----c-EEEEEeCCCCCc-eEEEEEE---CCeEEEEcCCCCc
Q psy5792 11 RNPSFGAVASTLKPQSGPFVYGVKTLSHSLHYVNIE-V----K-VAKVVSMPDAAQ-VVAAVFY---KGRIIYSDANDGN 80 (377)
Q Consensus 11 ~~~~~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~d-G----~-~~~i~~~~~~~~-p~~lav~---~~~ly~td~~~~~ 80 (377)
+.+..+.+..++++++++.|.... .+.|...+++ + . ...+. ..... ...+++. ++.+.++-..++.
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~--~h~~~~v~~~~~sp~~~~~~l~s~~~dg~ 89 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFT--GHGSSVVTTVKFSPIKGSQYLCSGDESGK 89 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEEC--TTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred CCCccCceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEe--cCCCceEEEEEECcCCCCCEEEEecCCCE
Confidence 334457899999999998887776 5678888875 6 6 66553 44455 7889983 5566666556777
Q ss_pred eEEEc-CCC--------CceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCc
Q psy5792 81 IRSIN-LDG--------SNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISD 150 (377)
Q Consensus 81 I~~~~-~~g--------~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~ 150 (377)
|...+ .+| .....+..... +..+.+ +++. .
T Consensus 90 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~---------------------------------------~ 129 (615)
T 1pgu_A 90 VIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW-DFEG---------------------------------------R 129 (615)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE-CTTS---------------------------------------S
T ss_pred EEEEeCCCCcccccccccccchhhcccccEEEEEE-eCCC---------------------------------------C
Confidence 88777 344 22222322222 334433 2222 1
Q ss_pred EEEEEeCCC---CeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecc
Q psy5792 151 FILFSVNSG---YDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYV 226 (377)
Q Consensus 151 ~l~~s~~~~---~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~ 226 (377)
+|+.+..+. +.|+..+ ... .+..+ .....+..+++.+.+..++.+-...+.|...+...........
T Consensus 130 ~l~~~~~~~~~~~~v~~~d--~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-- 200 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWD--SGN-----SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-- 200 (615)
T ss_dssp EEEEEECCSSCSEEEEETT--TCC-----EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC--
T ss_pred EEEEeccCCCCccEEEEEE--CCC-----cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec--
Confidence 344443321 2243332 111 11112 2334578899998776566665577888888876433222222
Q ss_pred ccCCCCCCC---CcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEe-e---CCCCCceeEEEcCCCCeEEEEecCC
Q psy5792 227 ETGDPTPVD---QFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLI-S---GGVDQPSALAVDPESGYLFWSESGK 299 (377)
Q Consensus 227 ~~~~~~~~~---~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~-~---~~~~~P~~iavdp~~g~lywtd~g~ 299 (377)
.... .+..+++.+.+++++++-...+.|.+.++........+ . .......++++. ...+|+.+..
T Consensus 201 -----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~-- 272 (615)
T 1pgu_A 201 -----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA-- 272 (615)
T ss_dssp -----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET--
T ss_pred -----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC--
Confidence 2233 57789998762555555555678999998755433333 3 334567899998 4445555542
Q ss_pred CCeEEEEecCCCCe-EEEEecC---CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 300 IPLIARAGLDGKKQ-TILAQEI---IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 300 ~~~I~r~~ldG~~~-~~l~~~~---~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
...|...++..... ..+.... -..+..+... .++.|+ +-. ..+.|...++..
T Consensus 273 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~-~~g~i~~~d~~~ 328 (615)
T 1pgu_A 273 DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRII-SLS-LDGTLNFYELGH 328 (615)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEE-EEE-TTSCEEEEETTE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEE-EEE-CCCCEEEEECCC
Confidence 46777777763332 2222210 1234455553 334444 344 466777777663
No 204
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.31 E-value=0.19 Score=51.30 Aligned_cols=246 Identities=8% Similarity=0.031 Sum_probs=134.3
Q ss_pred CccccccCCCCeEEEEeCCCC----cEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCC------------
Q psy5792 18 VASTLKPQSGPFVYGVKTLSH----SLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDAND------------ 78 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~----~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~------------ 78 (377)
..+.++.+++.+|.++....+ .|+..|+++. ...... ... ...++++ .+..||++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCc-ccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 456788888888877755433 8999999888 443321 111 2445777 456788875432
Q ss_pred ---CceEEEc-CCCCc--eEEEecCCC---ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCC
Q psy5792 79 ---GNIRSIN-LDGSN--STVLRNNAG---ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGIS 149 (377)
Q Consensus 79 ---~~I~~~~-~~g~~--~~~~~~~~~---p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~ 149 (377)
..|++.+ .+++. ..+...... ..++.+ +++.
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~-SpDg--------------------------------------- 244 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL-SDDG--------------------------------------- 244 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE-CTTS---------------------------------------
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE-cCCC---------------------------------------
Confidence 2366665 33332 122221110 122221 2221
Q ss_pred cEEEEEeC-C---CCeEEEEEcCC------CCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC---CCcEEEEEcCC
Q psy5792 150 DFILFSVN-S---GYDIMGIKYNK------NESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID---HGTISRTHRDG 216 (377)
Q Consensus 150 ~~l~~s~~-~---~~~I~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~---~~~I~~~~~~G 216 (377)
.+|+++.. . ...|+.++++. ...+ ...+..-.. .... .+.+.++.||+.... ..+|+++++++
T Consensus 245 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~l~~~~~-~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 245 RYVLLSIREGCDPVNRLWYCDLQQESNGITGILK-WVKLIDNFE-GEYD--YVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC-CEEEECSSS-SCEE--EEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred CEEEEEEEccCCCccEEEEEECcccccccCCccc-eEEeeCCCC-cEEE--EEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 24554432 1 23588888864 2110 122221111 1122 244558888887543 34799999986
Q ss_pred CC---cEEEEeccccCCCCCC-CCcceEEEeccCCeEEEEcCCC--CEEEEEEc-CCCeEEEEeeCCCCCceeEEEcCCC
Q psy5792 217 TG---RENIIEYVETGDPTPV-DQFTDIAVDWIAQNIYWSDPKE--NVIEVARL-TGQYRYVLISGGVDQPSALAVDPES 289 (377)
Q Consensus 217 ~~---~~~i~~~~~~~~~~~~-~~p~~iavD~~~~~lYwtd~~~--~~I~~~~~-~g~~~~~l~~~~~~~P~~iavdp~~ 289 (377)
.. .+.++. ..- ....++++. .++.|+++-... .+|.+.++ +|+..+.+.. ......+++.+|..
T Consensus 321 ~~~~~~~~l~~-------~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~-~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 321 PEESKWKVLVP-------EHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL-EVGSVVGYSGQKKD 391 (710)
T ss_dssp CCGGGCEEEEC-------CCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECC-CSSEEEEEECCTTC
T ss_pred CCcccceeccC-------CCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCC-CCceEEEEecCCCC
Confidence 53 255554 211 134555554 267788875544 47888998 6765444432 23445678888877
Q ss_pred CeEEEEecC--CCCeEEEEecCCCC--eEEEEe
Q psy5792 290 GYLFWSESG--KIPLIARAGLDGKK--QTILAQ 318 (377)
Q Consensus 290 g~lywtd~g--~~~~I~r~~ldG~~--~~~l~~ 318 (377)
..|+++-.+ ..+.|++.++.... .+.+-.
T Consensus 392 ~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 392 TEIFYQFTSFLSPGIIYHCDLTKEELEPRVFRE 424 (710)
T ss_dssp SEEEEEEECSSCCCEEEEEETTSSSCCCEEEEE
T ss_pred CEEEEEEeCCCCCCEEEEEECCCCccceEEeee
Confidence 778876432 35789999997655 555544
No 205
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.25 E-value=0.12 Score=47.75 Aligned_cols=291 Identities=8% Similarity=0.004 Sum_probs=154.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEe-----------CCCCCceEEEEEE--CCeEEEEcCCCCc
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVS-----------MPDAAQVVAAVFY--KGRIIYSDANDGN 80 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~-----------~~~~~~p~~lav~--~~~ly~td~~~~~ 80 (377)
+.+.++++.+.++.+.++-+..+.|...+++.. ...+.. .........+++. ++.++++-..++.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 467788888833444455556788999998765 222210 0134456778873 4556666666778
Q ss_pred eEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCC
Q psy5792 81 IRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSG 159 (377)
Q Consensus 81 I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~ 159 (377)
|...+ .+++....+.....+..+.. .+.. .+..++++....
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------------------------~~~~~~~~~~~~ 165 (408)
T 4a11_B 124 LKVWDTNTLQTADVFNFEETVYSHHM-SPVS-------------------------------------TKHCLVAVGTRG 165 (408)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEE-CSSC-------------------------------------SSCCEEEEEESS
T ss_pred EEEeeCCCCccceeccCCCceeeeEe-ecCC-------------------------------------CCCcEEEEEcCC
Confidence 88888 55544444432211223322 1100 011233333333
Q ss_pred CeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC-cEEEEecccc--------CC
Q psy5792 160 YDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG-RENIIEYVET--------GD 230 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~-~~~i~~~~~~--------~~ 230 (377)
+.|+..++..... ...+ ......+.++++.+.+.+++++-...+.|...++.... .......... ..
T Consensus 166 ~~v~~~d~~~~~~--~~~~--~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 166 PKVQLCDLKSGSC--SHIL--QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp SSEEEEESSSSCC--CEEE--CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred CeEEEEeCCCcce--eeee--cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccc
Confidence 4588888875533 1111 12344578999998777667666677888888886432 1111100000 00
Q ss_pred CCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC----CCCCc--eeEEEcCCCCeEEEEecCCCCeEE
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG----GVDQP--SALAVDPESGYLFWSESGKIPLIA 304 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~----~~~~P--~~iavdp~~g~lywtd~g~~~~I~ 304 (377)
......+.++++.+.+..| ++-...+.|.+.++........... ....+ .....+. .+.+.++.. ...|.
T Consensus 242 ~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~i~ 317 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHL-LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGC-SSEFVFVPY--GSTIA 317 (408)
T ss_dssp CSCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSS-SSCEEEEEE--TTEEE
T ss_pred ccccCceeEEEEcCCCCEE-EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCC-CceEEEEec--CCEEE
Confidence 0122347789998754444 4545567899988876443211111 01111 1222222 333444432 35777
Q ss_pred EEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 305 RAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 305 r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
..++........+...-.....+++.+.+..|+.+ . ..+.|..-+++.
T Consensus 318 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~-~dg~i~iw~~~~ 365 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG-S-RDCNILAWVPSL 365 (408)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE-E-TTSCEEEEEECC
T ss_pred EEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE-C-CCCeEEEEeCCC
Confidence 77766544433333323556789998765555544 4 466777777664
No 206
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.23 E-value=0.21 Score=51.30 Aligned_cols=118 Identities=13% Similarity=0.155 Sum_probs=71.1
Q ss_pred eEEEeccCCe-EEEEcCCC--CEEEEEEcCCCe-------EEEEe-eCC---CC--CceeEEEcCCCCeEE-EEe-cCCC
Q psy5792 239 DIAVDWIAQN-IYWSDPKE--NVIEVARLTGQY-------RYVLI-SGG---VD--QPSALAVDPESGYLF-WSE-SGKI 300 (377)
Q Consensus 239 ~iavD~~~~~-lYwtd~~~--~~I~~~~~~g~~-------~~~l~-~~~---~~--~P~~iavdp~~g~ly-wtd-~g~~ 300 (377)
.++.-+.++. +++.+... .+|..+++++.. ...++ ... .. .+...+..|.+..|+ |.. ....
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~ 343 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGY 343 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSC
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCc
Confidence 4445444432 34445443 368888887654 12222 211 11 155778888776665 553 2225
Q ss_pred CeEEEEecCCCCeEEEEecCCCCceE-EEEeCCCCEEEEEEeCC------CCeEEEEEccCCceEEE
Q psy5792 301 PLIARAGLDGKKQTILAQEIIMPIKD-ITLDRKNKRVYWCYSVG------SNVLESMDYSGGSKMQL 360 (377)
Q Consensus 301 ~~I~r~~ldG~~~~~l~~~~~~~P~g-lalD~~~~~LYw~d~~~------~~~i~~~~~~G~~~~~~ 360 (377)
..|+..+++|...+.|..... .... +..| +++||++.. . ...|++++++|+..++.
T Consensus 344 ~~l~~~~~~~~~~~~lT~g~~-~v~~~~~~d--~~~i~f~~~-~~~~~~~~~~ly~v~~~g~~~~~~ 406 (740)
T 4a5s_A 344 RHICYFQIDKKDCTFITKGTW-EVIGIEALT--SDYLYYISN-EYKGMPGGRNLYKIQLIDYTKVTC 406 (740)
T ss_dssp EEEEEEETTCSSCEESCCSSS-CEEEEEEEC--SSEEEEEES-CGGGCTTCBEEEEEETTEEEEEEE
T ss_pred eEEEEEECCCCceEecccCCE-EEEEEEEEe--CCEEEEEEe-cCCCCCceeEEEEEECCCCCccee
Confidence 789999999988777665432 2222 3465 789999876 4 35899999997655433
No 207
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.23 E-value=0.11 Score=47.08 Aligned_cols=269 Identities=8% Similarity=0.007 Sum_probs=147.7
Q ss_pred cCCccccccCCC--CeEEEEeCCCCcEEEEEcCC--c-E-EEEEeCCCCCceEEEEEE-CCeEEEEcCCCCceEEEc-CC
Q psy5792 16 GAVASTLKPQSG--PFVYGVKTLSHSLHYVNIEV--K-V-AKVVSMPDAAQVVAAVFY-KGRIIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 16 ~~~~~~~~d~~~--~~ly~~d~~~~~I~~~~~dG--~-~-~~i~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~-~~ 87 (377)
+.+.+++..+.. +.+.++-...+.|...+++. . . ..+. ........+++. ++...++-..++.|...+ .+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ--MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE--ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec--cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 477889999875 56666666778899999874 4 4 4443 445567888883 444444445567888888 44
Q ss_pred CCceEEEecCCCceeEEee-ecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 88 GSNSTVLRNNAGISDFILF-SVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 88 g~~~~~~~~~~~p~~i~v~-~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
++..........+..+.+. +++ ..++++....+.|+..+
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~----------------------------------------~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 118 NQAIQIAQHDAPVKTIHWIKAPN----------------------------------------YSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp TEEEEEEECSSCEEEEEEEECSS----------------------------------------CEEEEEEETTSEEEEEC
T ss_pred CCceeeccccCceEEEEEEeCCC----------------------------------------CCEEEEccCCCcEEEEE
Confidence 5444433322224444431 121 12344444445688888
Q ss_pred cCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC
Q psy5792 167 YNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA 246 (377)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~ 246 (377)
+..... ... +........+++. ...++.+. ..+.+...+++.......... . ........+++.+..
T Consensus 158 ~~~~~~--~~~---~~~~~~~~~~~~~--~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~ 224 (368)
T 3mmy_A 158 TRSSNP--MMV---LQLPERCYCADVI--YPMAVVAT-AERGLIVYQLENQPSEFRRIE--S---PLKHQHRCVAIFKDK 224 (368)
T ss_dssp SSCSSC--SEE---EECSSCEEEEEEE--TTEEEEEE-GGGCEEEEECSSSCEEEEECC--C---SCSSCEEEEEEEECT
T ss_pred CCCCcE--EEE---EecCCCceEEEec--CCeeEEEe-CCCcEEEEEeccccchhhhcc--c---cccCCCceEEEcccC
Confidence 765433 111 1222345555555 55666655 456777777765432222110 0 111223344444322
Q ss_pred C---eEEEEcCCCCEEEEEEcCCCe---EEEEeeCCCC------------CceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 247 Q---NIYWSDPKENVIEVARLTGQY---RYVLISGGVD------------QPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 247 ~---~lYwtd~~~~~I~~~~~~g~~---~~~l~~~~~~------------~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
. ..+.+-...+.|.+.+++... ....+..... ...+++++|...+|+.+.. .+.|...++
T Consensus 225 ~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--dg~i~iwd~ 302 (368)
T 3mmy_A 225 QNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS--DGRFSFWDK 302 (368)
T ss_dssp TSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET--TSCEEEEET
T ss_pred CCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc--CCeEEEEEC
Confidence 2 224455556788888887642 1111121111 4789999997777776653 467888887
Q ss_pred CCCCeEEEEecCCCCceEEEEeCCCCEEEEEEe
Q psy5792 309 DGKKQTILAQEIIMPIKDITLDRKNKRVYWCYS 341 (377)
Q Consensus 309 dG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~ 341 (377)
........+...-.....+++.+.+..|..+..
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 303 DARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred CCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 744333222222345788999877666666643
No 208
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.20 E-value=0.12 Score=46.63 Aligned_cols=278 Identities=12% Similarity=0.029 Sum_probs=145.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-------EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-------VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-L 86 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-------~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~ 86 (377)
+.++++++.+.++.+..+-+..+.|..-+++.. .+++ .........+++ .++.+..+-..++.|...+ .
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l--~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL--RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE--eCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 468889999887777667777788887776532 1222 133455677777 3444444444556666666 3
Q ss_pred CCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 87 DGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 87 ~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
.+...................+. ...++.+..+ +.++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~l~s~s~d-~~~~~~d 156 (340)
T 4aow_A 117 TGTTTRRFVGHTKDVLSVAFSSD---------------------------------------NRQIVSGSRD-KTIKLWN 156 (340)
T ss_dssp TTEEEEEEECCSSCEEEEEECTT---------------------------------------SSCEEEEETT-SCEEEEC
T ss_pred ccceeeeecCCCCceeEEEEeec---------------------------------------CccceeecCC-CeEEEEE
Confidence 33222222211111111111111 1123333222 2355555
Q ss_pred cCCCCceeeEEEEecC-CCCceEEEEEECCCC-EEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEec
Q psy5792 167 YNKNESKVTQVLGPLS-KVSLAAKVDFHAAED-YIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDW 244 (377)
Q Consensus 167 l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~-~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~ 244 (377)
+..... ...... .......+++..... .++.+-...+.|...++.......... ..-..+.+|++.+
T Consensus 157 ~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-------~h~~~v~~~~~s~ 225 (340)
T 4aow_A 157 TLGVCK----YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-------GHTGYLNTVTVSP 225 (340)
T ss_dssp TTSCEE----EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECT
T ss_pred eCCCce----EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-------CCCCcEEEEEECC
Confidence 443311 111111 233455666655433 444555566788888876543333332 2334578899987
Q ss_pred cCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec-----
Q psy5792 245 IAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE----- 319 (377)
Q Consensus 245 ~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~----- 319 (377)
. ++++++-...++|.+.++........+.. -.....++..|. +.+..+-. ...|...++.+.....-...
T Consensus 226 ~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~-~~~~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~ 300 (340)
T 4aow_A 226 D-GSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPN-RYWLCAAT--GPSIKIWDLEGKIIVDELKQEVIST 300 (340)
T ss_dssp T-SSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SSEEEEEE--TTEEEEEETTTTEEEEEECCC----
T ss_pred C-CCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecCCC-CceeeccC--CCEEEEEECCCCeEEEeccccceee
Confidence 4 55556666678999999987665444443 345688888874 44444432 35777777765432211111
Q ss_pred ----CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 320 ----IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 320 ----~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.......+++.+.+..|+- -. ..+.|..-++.
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~s-gs-~Dg~v~iW~~~ 336 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFA-GY-TDNLVRVWQVT 336 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEE-EE-TTSCEEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCEEEE-Ee-CCCEEEEEeCC
Confidence 1234567788765454443 33 45556555544
No 209
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.19 E-value=0.11 Score=46.87 Aligned_cols=228 Identities=10% Similarity=0.065 Sum_probs=122.3
Q ss_pred cCCccccccCCCC-eEEEEeCCCCcEEEEEc-CCc-EEEEEeCC--CCCceEEEEEECCeEEEEcCCCCceEEEc-CC--
Q psy5792 16 GAVASTLKPQSGP-FVYGVKTLSHSLHYVNI-EVK-VAKVVSMP--DAAQVVAAVFYKGRIIYSDANDGNIRSIN-LD-- 87 (377)
Q Consensus 16 ~~~~~~~~d~~~~-~ly~~d~~~~~I~~~~~-dG~-~~~i~~~~--~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~-- 87 (377)
..+.+++..+.+. .|+ +-...+.|...++ ++. ...+. . .......|++..+.++++-..++.|...+ ..
T Consensus 57 ~~v~~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIY-VGTVQGEILKVDLIGSPSFQALT--NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp SCEEEEEEEESSSEEEE-EEETTSCEEEECSSSSSSEEECB--SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHT
T ss_pred CceEEEEECCCCCcEEE-EEcCCCeEEEEEeccCCceEecc--ccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccc
Confidence 4677788887766 454 4445688999999 887 76553 3 45566788885455555555667777777 32
Q ss_pred -------CCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCC
Q psy5792 88 -------GSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGY 160 (377)
Q Consensus 88 -------g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~ 160 (377)
++....+.....+.++.+ .++. ++.+. ..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~v~~~~~-----------------------------------------~~~~-l~~~~-~d~ 170 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTKVKNKIFTMDT-----------------------------------------NSSR-LIVGM-NNS 170 (342)
T ss_dssp TBCEEEEESCSSSSSSCCCEEEEEE-----------------------------------------CSSE-EEEEE-STT
T ss_pred cccccccCCeeeEEeeCCceEEEEe-----------------------------------------cCCc-EEEEe-CCC
Confidence 211111110000222221 0112 33333 233
Q ss_pred eEEEEEcCC-CCceeeEEEEecCCCCceEEEEEEC-CCCEEEEEEcCCCcEEEEEcCCC------CcEEEEecccc--CC
Q psy5792 161 DIMGIKYNK-NESKVTQVLGPLSKVSLAAKVDFHA-AEDYIYWVDIDHGTISRTHRDGT------GRENIIEYVET--GD 230 (377)
Q Consensus 161 ~I~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~d~-~~~~ly~sd~~~~~I~~~~~~G~------~~~~i~~~~~~--~~ 230 (377)
.|+..++.. ... ............+..+++.+ .+..++... ..+.|...+++.. ........... ..
T Consensus 171 ~i~i~d~~~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T 1yfq_A 171 QVQWFRLPLCEDD--NGTIEESGLKYQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247 (342)
T ss_dssp EEEEEESSCCTTC--CCEEEECSCSSCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTC
T ss_pred eEEEEECCccccc--cceeeecCCCCceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccc
Confidence 588888876 322 11122223344678899987 666666555 5677777666543 22222220000 00
Q ss_pred CCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCC-CCCceeEEEcCCCCeEEEE
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG-VDQPSALAVDPESGYLFWS 295 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~lywt 295 (377)
......+..+++.+..+.| ++-...++|.+.++........+... .....+++ |...+|..+
T Consensus 248 ~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 248 TNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp CSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred cccceeEEEEEEcCCCCEE-EEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEE
Confidence 0002257889998755555 45455678999999865543333332 33446666 544444444
No 210
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.19 E-value=0.2 Score=49.24 Aligned_cols=158 Identities=5% Similarity=-0.055 Sum_probs=99.1
Q ss_pred CCceEEEEEECCCCEEEEEEcCC---CcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDH---GTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIE 260 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~---~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~ 260 (377)
...+..+++.+.+..|..+.... +.|+..+ .+ ....... .....+..+++.+.+..++.+-...+.|.
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~-~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 186 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SG-NSLGEVS-------GHSQRINACHLKQSRPMRSMTVGDDGSVV 186 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TC-CEEEECC-------SCSSCEEEEEECSSSSCEEEEEETTTEEE
T ss_pred cccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CC-Ccceeee-------cCCccEEEEEECCCCCcEEEEEeCCCcEE
Confidence 44588999999888887776432 3555444 12 2122222 23445888999976665777777778999
Q ss_pred EEEcCCCeEEEEeeCCCC---CceeEEEcCC-CCeEEEEecCCCCeEEEEecCCCCeEEEE-e---cCCCCceEEEEeCC
Q psy5792 261 VARLTGQYRYVLISGGVD---QPSALAVDPE-SGYLFWSESGKIPLIARAGLDGKKQTILA-Q---EIIMPIKDITLDRK 332 (377)
Q Consensus 261 ~~~~~g~~~~~l~~~~~~---~P~~iavdp~-~g~lywtd~g~~~~I~r~~ldG~~~~~l~-~---~~~~~P~glalD~~ 332 (377)
+.++........+..... ....++++|. ..+|+.... ...|...++........+ . ..-.....+++. .
T Consensus 187 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~ 263 (615)
T 1pgu_A 187 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS--DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D 263 (615)
T ss_dssp EEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET--TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S
T ss_pred EEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC--CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C
Confidence 999877654444443344 5789999997 555555543 467888887644433333 2 223456778886 4
Q ss_pred CCEEEEEEeCCCCeEEEEEccCC
Q psy5792 333 NKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 333 ~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
++++++-. ..+.|...++..+
T Consensus 264 -~~~l~~~~-~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 264 -SQKFATVG-ADATIRVWDVTTS 284 (615)
T ss_dssp -SSEEEEEE-TTSEEEEEETTTT
T ss_pred -CCEEEEEc-CCCcEEEEECCCC
Confidence 44445555 5678888887744
No 211
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.19 E-value=0.0058 Score=60.53 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=80.9
Q ss_pred CCCCCcceEEEeccCCeEEEEcCC---------------------CCEEEEEEcCCC------e--EEEEeeC-------
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPK---------------------ENVIEVARLTGQ------Y--RYVLISG------- 275 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~---------------------~~~I~~~~~~g~------~--~~~l~~~------- 275 (377)
..+.+|+++++++.++.||++-.+ .+.|++...++. + ...++..
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 456689999999999999998432 268999988652 1 1122210
Q ss_pred -------------CCCCceeEEEcCCCCeEEE-EecC----------CCCeEEEEecCCCCeEEEEec-CCCCceEEEEe
Q psy5792 276 -------------GVDQPSALAVDPESGYLFW-SESG----------KIPLIARAGLDGKKQTILAQE-IIMPIKDITLD 330 (377)
Q Consensus 276 -------------~~~~P~~iavdp~~g~lyw-td~g----------~~~~I~r~~ldG~~~~~l~~~-~~~~P~glalD 330 (377)
.+..|..|++|+ .|.||+ ||.+ .+..+++.+.+....+.++.. ....|+|+++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 268899999997 699999 7742 134788988764455555543 24679999999
Q ss_pred CCCCEEEEEEeCCCC
Q psy5792 331 RKNKRVYWCYSVGSN 345 (377)
Q Consensus 331 ~~~~~LYw~d~~~~~ 345 (377)
+..+.||++-. ..+
T Consensus 540 PD~ktLfV~vQ-HPG 553 (592)
T 4a9v_A 540 PDQKTLFVGIQ-HPG 553 (592)
T ss_dssp TTSSEEEEEEE-STT
T ss_pred CCCCEEEEEEe-CCC
Confidence 99999999987 443
No 212
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.17 E-value=0.17 Score=47.87 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=141.0
Q ss_pred CceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCC
Q psy5792 59 AQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSK 135 (377)
Q Consensus 59 ~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~ 135 (377)
.....+++ ..+.+.++-..++.|...+ .+|+....+..... +..+.+ +++..
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~-~~~~~------------------------ 163 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGK------------------------ 163 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE-CTTSS------------------------
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEE-cCCCC------------------------
Confidence 34566777 3445666666677888888 66766666654333 444443 22221
Q ss_pred ccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEc
Q psy5792 136 VSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHR 214 (377)
Q Consensus 136 ~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~ 214 (377)
++++....+.|+..++..... +..+. ....+.++++.+.++.|+-+ ...+.|...++
T Consensus 164 ----------------~l~sgs~D~~i~iwd~~~~~~-----~~~~~~h~~~V~~v~~~p~~~~l~s~-s~D~~i~~wd~ 221 (410)
T 1vyh_C 164 ----------------LLASCSADMTIKLWDFQGFEC-----IRTMHGHDHNVSSVSIMPNGDHIVSA-SRDKTIKMWEV 221 (410)
T ss_dssp ----------------EEEEEETTSCCCEEETTSSCE-----EECCCCCSSCEEEEEECSSSSEEEEE-ETTSEEEEEET
T ss_pred ----------------EEEEEeCCCeEEEEeCCCCce-----eEEEcCCCCCEEEEEEeCCCCEEEEE-eCCCeEEEEEC
Confidence 333433334577777765432 22222 23457889999866666544 46788888888
Q ss_pred CCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCC-----
Q psy5792 215 DGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPES----- 289 (377)
Q Consensus 215 ~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~----- 289 (377)
........+. ........+++.+ .+.++.+-...+.|.+.++........+.........+++.|..
T Consensus 222 ~~~~~~~~~~-------~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 222 QTGYCVKTFT-------GHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI 293 (410)
T ss_dssp TTCCEEEEEE-------CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred CCCcEEEEEe-------CCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccch
Confidence 6443322333 2334577788875 45666776677889999987665444444444556788888752
Q ss_pred --------------CeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 290 --------------GYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 290 --------------g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
|.+.++-. ....|...++........+...-....++++++.+..|+ +-. ..+.|..-++..+
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs-~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s-~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGS-RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCA-DDKTLRVWDYKNK 370 (410)
T ss_dssp GGCCSCC-------CCEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE-EEE-TTTEEEEECCTTS
T ss_pred hhhccccccccCCCCCEEEEEe-CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE-EEe-CCCeEEEEECCCC
Confidence 33444433 246777777764332222222234567899976555444 555 5677877777644
Q ss_pred c
Q psy5792 356 S 356 (377)
Q Consensus 356 ~ 356 (377)
.
T Consensus 371 ~ 371 (410)
T 1vyh_C 371 R 371 (410)
T ss_dssp C
T ss_pred c
Confidence 3
No 213
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.14 E-value=0.17 Score=47.31 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=124.4
Q ss_pred ccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC
Q psy5792 23 KPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG 99 (377)
Q Consensus 23 ~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~ 99 (377)
..+.+ .++.+-+..+.|...++.+. ..... .........+++ .++.+.++-..++.|...+ .+++....+.....
T Consensus 105 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~ 182 (420)
T 3vl1_A 105 AKLQM-RRFILGTTEGDIKVLDSNFNLQREID-QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182 (420)
T ss_dssp ECSSS-CEEEEEETTSCEEEECTTSCEEEEET-TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred EecCC-CEEEEEECCCCEEEEeCCCcceeeec-ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence 34444 44455566788999998877 54442 244556788888 3444555555677888888 66776666654333
Q ss_pred -ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEE
Q psy5792 100 -ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVL 178 (377)
Q Consensus 100 -p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~ 178 (377)
+..+++ +++.. .|+ +....+.|+..++..... ...+
T Consensus 183 ~v~~~~~-~~~~~---------------------------------------~l~-s~~~d~~v~iwd~~~~~~--~~~~ 219 (420)
T 3vl1_A 183 TVTDIAI-IDRGR---------------------------------------NVL-SASLDGTIRLWECGTGTT--IHTF 219 (420)
T ss_dssp CEEEEEE-ETTTT---------------------------------------EEE-EEETTSCEEEEETTTTEE--EEEE
T ss_pred cEEEEEE-cCCCC---------------------------------------EEE-EEcCCCcEEEeECCCCce--eEEe
Confidence 555554 33221 232 222223466666554321 1111
Q ss_pred Eec-CCC---------------------CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCC
Q psy5792 179 GPL-SKV---------------------SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQ 236 (377)
Q Consensus 179 ~~~-~~~---------------------~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~ 236 (377)
... ... ..+..+++++. +.+.++-...+.|...++........... .....
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~ 292 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSKEQTIQLPS------KFTCS 292 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTCCEEEEECC------TTSSC
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCCceeEEccc------ccCCC
Confidence 000 011 12223334453 44444444678888888865432222220 12345
Q ss_pred cceEEEeccCCeEEEEcCCCCEEEEEEcCCCe--EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 237 FTDIAVDWIAQNIYWSDPKENVIEVARLTGQY--RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 237 p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~--~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
+..+++.+.++.++++-...+.|.+.++.... ...+..........++.. .+.++.+-. ....|...++..
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~-~d~~v~iw~~~~ 365 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALFVSSG-FDTSIKLDIISD 365 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEEEEET-TTEEEEEEEECC
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEEEEec-CCccEEEEeccC
Confidence 88899997666466776777899999997642 334433223334555553 344455432 235555555443
No 214
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.09 E-value=0.21 Score=47.41 Aligned_cols=258 Identities=10% Similarity=0.053 Sum_probs=142.0
Q ss_pred eEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEE
Q psy5792 29 FVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFI 104 (377)
Q Consensus 29 ~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~ 104 (377)
...++-+..+.|...|+... ..++. ........+++. +.+.++-..++.|...+ .+|+....+..... +..+.
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTLECKRILT--GHTGSVLCLQYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp SEEEEEESSSCEEEEESSSCCEEEEEC--CCSSCEEEEECC-SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeEEEEEc--CCCCcEEEEEEC-CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 44455566788999998766 44442 444556777774 44555555678888888 66766555543222 33333
Q ss_pred eeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEE-EEecCC
Q psy5792 105 LFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQV-LGPLSK 183 (377)
Q Consensus 105 v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~-~~~~~~ 183 (377)
. ++ . .+++....+.|+..++..... ... ......
T Consensus 221 ~-~~-----------------------------------------~-~l~s~s~dg~i~vwd~~~~~~--~~~~~~~~~~ 255 (435)
T 1p22_A 221 F-NN-----------------------------------------G-MMVTCSKDRSIAVWDMASPTD--ITLRRVLVGH 255 (435)
T ss_dssp C-CT-----------------------------------------T-EEEEEETTSCEEEEECSSSSC--CEEEEEECCC
T ss_pred E-cC-----------------------------------------C-EEEEeeCCCcEEEEeCCCCCC--ceeeeEecCC
Confidence 2 10 1 233333334588888765533 111 111223
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVAR 263 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~ 263 (377)
...+.+++++ ++.|+.+. ..+.|...++.......... .....+..++++ ++++++-...+.|.+.+
T Consensus 256 ~~~v~~~~~~--~~~l~s~~-~dg~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 256 RAAVNVVDFD--DKYIVSAS-GDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYR---DRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp SSCEEEEEEE--TTEEEEEE-TTSEEEEEETTTCCEEEEEE-------CCSSCEEEEEEE---TTEEEEEETTSCEEEEE
T ss_pred CCcEEEEEeC--CCEEEEEe-CCCeEEEEECCcCcEEEEEc-------CCCCcEEEEEeC---CCEEEEEeCCCeEEEEE
Confidence 3456778775 66776665 56888888887544333333 233456677775 44556666678899999
Q ss_pred cCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCC---------eEEEEecCCCCceEEEEeCCCC
Q psy5792 264 LTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKK---------QTILAQEIIMPIKDITLDRKNK 334 (377)
Q Consensus 264 ~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~---------~~~l~~~~~~~P~glalD~~~~ 334 (377)
+........+........++++| ..+|..... .+.|...++.... ........-.....++.| +.
T Consensus 323 ~~~~~~~~~~~~h~~~v~~~~~~--~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~ 396 (435)
T 1p22_A 323 IECGACLRVLEGHEELVRCIRFD--NKRIVSGAY--DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EF 396 (435)
T ss_dssp TTTCCEEEEECCCSSCEEEEECC--SSEEEEEET--TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SS
T ss_pred CCCCCEEEEEeCCcCcEEEEEec--CCEEEEEeC--CCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC--CC
Confidence 98554433344344556777774 345555543 4566666553211 222222223455677774 23
Q ss_pred EEEEEEeCCCCeEEEEEccCC
Q psy5792 335 RVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 335 ~LYw~d~~~~~~i~~~~~~G~ 355 (377)
..++-. ..+.|...++...
T Consensus 397 -~l~s~s-~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 397 -QIVSSS-HDDTILIWDFLND 415 (435)
T ss_dssp -CEEECC-SSSEEEEEC----
T ss_pred -EEEEEe-CCCEEEEEECCCC
Confidence 344444 5678888887744
No 215
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.08 E-value=0.2 Score=46.98 Aligned_cols=285 Identities=11% Similarity=0.041 Sum_probs=149.4
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCC----------------CCCceEEEEE-ECCeEEEEcC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMP----------------DAAQVVAAVF-YKGRIIYSDA 76 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~----------------~~~~p~~lav-~~~~ly~td~ 76 (377)
..+.++++.+++..|... ..+.+...+.... ...+.... .......+++ .++....+-.
T Consensus 65 ~~V~~v~fspdg~~la~g--~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~ 142 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATG--CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 142 (393)
T ss_dssp SCCCEEEECTTSSEEEEE--CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred CEEEEEEECCCCCEEEEE--cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc
Confidence 356788888887766443 3467777776444 44442000 0012456777 3445555555
Q ss_pred CCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEE
Q psy5792 77 NDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILF 154 (377)
Q Consensus 77 ~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~ 154 (377)
.++.|...+ .+++....+..... +..+.+ +++.. .| +
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~p~~~---------------------------------------~l-~ 181 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQGHEQDIYSLDY-FPSGD---------------------------------------KL-V 181 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTTSS---------------------------------------EE-E
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCEEEEEE-cCCCC---------------------------------------EE-E
Confidence 677888888 55555555543333 444443 22221 23 3
Q ss_pred EeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCC
Q psy5792 155 SVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPV 234 (377)
Q Consensus 155 s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~ 234 (377)
+....+.|+..++..... ...+.....+..+++.+.++.++.+-...+.|...++....................
T Consensus 182 s~s~d~~v~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~ 256 (393)
T 1erj_A 182 SGSGDRTVRIWDLRTGQC-----SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK 256 (393)
T ss_dssp EEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCS
T ss_pred EecCCCcEEEEECCCCee-----EEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC
Confidence 333344688888765532 222223345778888885666666655678888888764332221110000000122
Q ss_pred CCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCe------------EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5792 235 DQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQY------------RYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 302 (377)
Q Consensus 235 ~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~------------~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~ 302 (377)
..+.++++.+.+. +..+-...++|.+.++.... +.............+++.|...+|.-.. ....
T Consensus 257 ~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs--~D~~ 333 (393)
T 1erj_A 257 DSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS--KDRG 333 (393)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE--TTSE
T ss_pred CCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe--CCCe
Confidence 3478899987544 44565666788888875421 1112222344567888888655555443 2466
Q ss_pred EEEEecCCCCeEEEEecCCCCceEEEEeCC-----CCEEEEEEeCCCCeEEEEEc
Q psy5792 303 IARAGLDGKKQTILAQEIIMPIKDITLDRK-----NKRVYWCYSVGSNVLESMDY 352 (377)
Q Consensus 303 I~r~~ldG~~~~~l~~~~~~~P~glalD~~-----~~~LYw~d~~~~~~i~~~~~ 352 (377)
|...++........+...-.....+++... ++.++.+-. ..++|..-++
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs-~Dg~i~iW~~ 387 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS-GDCKARIWKY 387 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE-TTSEEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC-CCCcEEECcc
Confidence 776666544433333322234455665431 355566655 5555544443
No 216
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.07 E-value=0.19 Score=46.55 Aligned_cols=190 Identities=10% Similarity=0.047 Sum_probs=118.8
Q ss_pred EEEEEeCCCCeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC
Q psy5792 151 FILFSVNSGYDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG 229 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~ 229 (377)
+|+.+. ..+.|+..++..... ...... .....+.++++.+.++.++++-...+.|...++.+.....+...
T Consensus 88 ~l~s~~-~dg~i~iwd~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---- 159 (383)
T 3ei3_B 88 TVAVGS-KGGDIILWDYDVQNK---TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKT---- 159 (383)
T ss_dssp EEEEEE-BTSCEEEEETTSTTC---EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECC----
T ss_pred EEEEEc-CCCeEEEEeCCCccc---ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEecc----
Confidence 344443 334588888876644 222222 24456889999885555555555678999999987444444330
Q ss_pred CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 230 DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
...-..+..+++.+.+. ++++-...+.|.+.++++.....+.. ......+++++|...+++.+-. ....|...++.
T Consensus 160 -~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~ 235 (383)
T 3ei3_B 160 -DSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSS-VDATVKLWDLR 235 (383)
T ss_dssp -CCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEE-TTSEEEEEEGG
T ss_pred -CCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCCCEEEEecc-CCCcEEEEEECCCCCCEEEEEe-CCCEEEEEeCC
Confidence 01113478999997555 44555566899999998776655543 3566899999997763555443 24677777765
Q ss_pred C-----CCeEEEEecCCCCceEEEEeC-CCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 310 G-----KKQTILAQEIIMPIKDITLDR-KNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 310 G-----~~~~~l~~~~~~~P~glalD~-~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
. .-...+ . .-.....+++++ ....|+ +-. ..+.|...++..+.
T Consensus 236 ~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~~l~-~~~-~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 236 NIKDKNSYIAEM-P-HEKPVNAAYFNPTDSTKLL-TTD-QRNEIRVYSSYDWS 284 (383)
T ss_dssp GCCSTTCEEEEE-E-CSSCEEEEEECTTTSCEEE-EEE-SSSEEEEEETTBTT
T ss_pred CCCcccceEEEe-c-CCCceEEEEEcCCCCCEEE-EEc-CCCcEEEEECCCCc
Confidence 3 222222 2 235678899987 445554 445 57888888876443
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.07 E-value=0.34 Score=49.43 Aligned_cols=145 Identities=8% Similarity=0.067 Sum_probs=85.5
Q ss_pred eEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC---CCcEEEEEcCCCCc---EEEEeccccCCCCCC
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID---HGTISRTHRDGTGR---ENIIEYVETGDPTPV 234 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~---~~~I~~~~~~G~~~---~~i~~~~~~~~~~~~ 234 (377)
.|+.++++....+ ...+.+ ........ +++.++.||+.... ..+|+++++++... +.++. ..-
T Consensus 260 ~i~~~d~~~~~~~-~~~l~~-~~~~~~~~--~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-------~~~ 328 (693)
T 3iuj_A 260 RLYVKDLSQENAP-LLTVQG-DLDADVSL--VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-------ERQ 328 (693)
T ss_dssp EEEEEETTSTTCC-CEEEEC-SSSSCEEE--EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-------CCS
T ss_pred EEEEEECCCCCCc-eEEEeC-CCCceEEE--EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-------CCC
Confidence 4888888655321 112221 11111122 33447888876533 46899999987554 55554 222
Q ss_pred CCcceEEEeccCCeEEEEcCCC--CEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecC--CCCeEEEEecCC
Q psy5792 235 DQFTDIAVDWIAQNIYWSDPKE--NVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG--KIPLIARAGLDG 310 (377)
Q Consensus 235 ~~p~~iavD~~~~~lYwtd~~~--~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g--~~~~I~r~~ldG 310 (377)
... .+.+.++.|+++.... .+|.+.+++|...+.+.........++..++....|+++-.+ ..+.|++.++++
T Consensus 329 ~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 329 QVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp SCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred CEE---EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 222 5555588888875443 479999999887655532222233455666777788877532 357999999987
Q ss_pred CCeEEEEec
Q psy5792 311 KKQTILAQE 319 (377)
Q Consensus 311 ~~~~~l~~~ 319 (377)
...+.+...
T Consensus 406 g~~~~l~~~ 414 (693)
T 3iuj_A 406 GAISLYRAS 414 (693)
T ss_dssp CCEEEEECC
T ss_pred CeEEEEEeC
Confidence 666665543
No 218
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.02 E-value=0.54 Score=50.97 Aligned_cols=225 Identities=8% Similarity=0.060 Sum_probs=132.4
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEE---CCeEEEEcCCCCceEEEc-CCCC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFY---KGRIIYSDANDGNIRSIN-LDGS 89 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~---~~~ly~td~~~~~I~~~~-~~g~ 89 (377)
..+.++++.+.+..|... +..+.|...|+... ..++. ........+++. +..+..+-..++.|...+ .+++
T Consensus 658 ~~v~~~~~s~~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATC-SADKKVKIWDSATGKLVHTYD--EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp SCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred CCEEEEEEecCCCEEEEE-eCCCeEEEEECCCCceEEEEc--CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 356778888876666443 45678888888655 55554 445566777773 344556656677888888 5665
Q ss_pred ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 90 NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 90 ~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
....+..... +..+.+ +++.. .+++....|.|+..++.
T Consensus 735 ~~~~~~~h~~~v~~~~~-sp~~~----------------------------------------~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 735 CRNTMFGHTNSVNHCRF-SPDDE----------------------------------------LLASCSADGTLRLWDVR 773 (1249)
T ss_dssp EEEEECCCSSCEEEEEE-CSSTT----------------------------------------EEEEEESSSEEEEEEGG
T ss_pred hhheecCCCCCEEEEEE-ecCCC----------------------------------------EEEEEECCCeEEEEeCC
Confidence 5555543333 444443 22221 23333333357666665
Q ss_pred CCCceeeEEEE-----------ecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEE-EEeccccCCCCCCCC
Q psy5792 169 KNESKVTQVLG-----------PLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGREN-IIEYVETGDPTPVDQ 236 (377)
Q Consensus 169 ~~~~~~~~~~~-----------~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~-i~~~~~~~~~~~~~~ 236 (377)
.... ...+. +......+..+++.+.+..+..+. .+.|...++....... +.. .....
T Consensus 774 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~-------~~~~~ 842 (1249)
T 3sfz_A 774 SANE--RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSGLLAEIHT-------GHHST 842 (1249)
T ss_dssp GTEE--EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCCEEEEEEC-------SSSSC
T ss_pred CCcc--cceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCCceeEEcC-------CCCCc
Confidence 4321 01100 000111345667777677777665 4678888876543322 222 23445
Q ss_pred cceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEe
Q psy5792 237 FTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 296 (377)
Q Consensus 237 p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd 296 (377)
+..+++.+.+. +..+-...+.|.+.+++................++++.|.+..|+.+.
T Consensus 843 v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 843 IQYCDFSPYDH-LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp CCEEEECSSTT-EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 88899997544 555556667899999987765555555566789999999666666554
No 219
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.00 E-value=0.19 Score=45.54 Aligned_cols=239 Identities=9% Similarity=-0.038 Sum_probs=131.0
Q ss_pred cCCccccccCCC---CeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEE--CCeEEEEcCCCCceEEEc-CC
Q psy5792 16 GAVASTLKPQSG---PFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFY--KGRIIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 16 ~~~~~~~~d~~~---~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~-~~ 87 (377)
..+.+++..+.. +.+.++-...+.|...+++.. ...+. ........+++. ++.++++-..++.|...+ .+
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 345667777663 345566667788999998755 55553 455667888883 556666666678888888 56
Q ss_pred CCceEEEe---cCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEE
Q psy5792 88 GSNSTVLR---NNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIM 163 (377)
Q Consensus 88 g~~~~~~~---~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~ 163 (377)
++....+. .... +..+.+ +++.. .++.+. ..+.|+
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~-~~~~~---------------------------------------~l~~~~-~dg~i~ 186 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADY-DLLGE---------------------------------------KIMSCG-MDHSLK 186 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEE-CTTSS---------------------------------------EEEEEE-TTSCEE
T ss_pred CeEEEEecccccccCceeEEEE-CCCCC---------------------------------------EEEEec-CCCCEE
Confidence 65555552 1112 444443 22211 233333 233577
Q ss_pred EEEcCCCCcee--e---------------------EEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc
Q psy5792 164 GIKYNKNESKV--T---------------------QVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR 219 (377)
Q Consensus 164 ~~~l~~~~~~~--~---------------------~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~ 219 (377)
..++....... . ...... .....+..++++ ++.| ++-...+.|...++.....
T Consensus 187 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 187 LWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLI-LSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp EEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEE-EEECSSSEEEEEEESSTTC
T ss_pred EEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEE-EEEecCCEEEEEeCCCccc
Confidence 77765321100 0 000000 023346677777 4444 4444578888888764321
Q ss_pred ------------EEEEeccccCCCCCCCCcceEEEeccC-CeEEEEcCCCCEEEEEEcCCCe----EEEEeeCC--CCCc
Q psy5792 220 ------------ENIIEYVETGDPTPVDQFTDIAVDWIA-QNIYWSDPKENVIEVARLTGQY----RYVLISGG--VDQP 280 (377)
Q Consensus 220 ------------~~i~~~~~~~~~~~~~~p~~iavD~~~-~~lYwtd~~~~~I~~~~~~g~~----~~~l~~~~--~~~P 280 (377)
..+... . .....+..+++.+.. +++.++-...+.|.+.+++... ....+... ....
T Consensus 264 ~~~~~~~~~~~~~~~~~~--~---~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v 338 (366)
T 3k26_A 264 DIDKIKPSESNVTILGRF--D---YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAI 338 (366)
T ss_dssp CGGGCCTTCCCEEEEEEE--E---CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCE
T ss_pred cccccccCCcchheeccc--c---ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCce
Confidence 111110 0 122346777787651 4555565667889999998642 11122222 3567
Q ss_pred eeEEEcCCCCeEEEEecCCCCeEEEEe
Q psy5792 281 SALAVDPESGYLFWSESGKIPLIARAG 307 (377)
Q Consensus 281 ~~iavdp~~g~lywtd~g~~~~I~r~~ 307 (377)
.+++++|...+|..+.. ...|...+
T Consensus 339 ~~~~~s~~~~~l~s~~~--dg~i~iwd 363 (366)
T 3k26_A 339 RQTSFSRDSSILIAVCD--DASIWRWD 363 (366)
T ss_dssp EEEEECTTSSEEEEEET--TSEEEEEE
T ss_pred EEEEeCCCCCeEEEEeC--CCEEEEEE
Confidence 89999986666665543 34555444
No 220
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.00 E-value=0.34 Score=49.77 Aligned_cols=113 Identities=16% Similarity=0.205 Sum_probs=70.8
Q ss_pred CCCCEEEEEEcC---CCcEEEEEcCCC--CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC--CEEEEEEcCC
Q psy5792 194 AAEDYIYWVDID---HGTISRTHRDGT--GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE--NVIEVARLTG 266 (377)
Q Consensus 194 ~~~~~ly~sd~~---~~~I~~~~~~G~--~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~--~~I~~~~~~g 266 (377)
+.++.||+.... ..+|+++++++. ..+.++. ..-....+++++ ++.|+++.... .+|.+.+++|
T Consensus 325 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~-------~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 325 GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP-------ESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC-------CCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTS
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec-------CCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCC
Confidence 448888887542 457999999863 3445554 222224455554 78888875443 4788888888
Q ss_pred CeEEEEeeCCCCCceeEEEcCCCCeEEEEec--CCCCeEEEEecCCCCeEE
Q psy5792 267 QYRYVLISGGVDQPSALAVDPESGYLFWSES--GKIPLIARAGLDGKKQTI 315 (377)
Q Consensus 267 ~~~~~l~~~~~~~P~~iavdp~~g~lywtd~--g~~~~I~r~~ldG~~~~~ 315 (377)
+..+.+.........+++.+|....|+++-. ...+.|++.++++...+.
T Consensus 396 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~ 446 (741)
T 1yr2_A 396 KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTP 446 (741)
T ss_dssp CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEE
T ss_pred CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 7555443212334567888887777776643 234689999987655443
No 221
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.065 Score=55.35 Aligned_cols=246 Identities=10% Similarity=0.010 Sum_probs=134.7
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEE-eCCCCCceEEEEE-EC--CeEEEEcCCCCceEEEc-CCCC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVV-SMPDAAQVVAAVF-YK--GRIIYSDANDGNIRSIN-LDGS 89 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~-~~~~~~~p~~lav-~~--~~ly~td~~~~~I~~~~-~~g~ 89 (377)
+.+.+++.++.++.|+.. ...+.|...++.+. ...+. .........++++ .. +...++-..++.|...+ .+++
T Consensus 10 ~~V~~l~~s~dg~~latg-~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATC-SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCEEEECCCSSSCCEEEE-ETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred ceeEEEEECCCCCeEEEE-ECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 457788888877666544 45788998888643 22221 1244455678888 33 55555556678888888 4443
Q ss_pred c--eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 90 N--STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 90 ~--~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
. ...+..... +..+.+ +++.. ...++.+. ..|.|+..+
T Consensus 89 ~~~~~~~~~h~~~V~~v~~-sp~~~-------------------------------------~~~l~sgs-~dg~I~vwd 129 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQW-APHEY-------------------------------------GPLLLVAS-SDGKVSVVE 129 (753)
T ss_dssp EEEEEEECCCSSCEEEEEE-CCGGG-------------------------------------CSEEEEEE-TTSEEEEEE
T ss_pred ccccccccCCCCCeEEEEE-CCCCC-------------------------------------CCEEEEEe-CCCcEEEEE
Confidence 2 222222222 333333 22100 01333333 344688888
Q ss_pred cCCCCceeeEEEEecCCCCceEEEEEECC------------CCEEEEEEcCCCcEEEEEcCCCCcE-EEEeccccCCCCC
Q psy5792 167 YNKNESKVTQVLGPLSKVSLAAKVDFHAA------------EDYIYWVDIDHGTISRTHRDGTGRE-NIIEYVETGDPTP 233 (377)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~l~~d~~------------~~~ly~sd~~~~~I~~~~~~G~~~~-~i~~~~~~~~~~~ 233 (377)
+..... ............+..+++++. ++.++.+-..++.|...++...... .+... .. ..
T Consensus 130 l~~~~~--~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~~---~h 203 (753)
T 3jro_A 130 FKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LE---GH 203 (753)
T ss_dssp CCSSSC--CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE-EC---CC
T ss_pred eecCCC--cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee-ec---CC
Confidence 865532 111111233456788888874 2444555556788888877643221 11110 00 22
Q ss_pred CCCcceEEEeccC--CeEEEEcCCCCEEEEEEcCCCeE---EEEee--CCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 234 VDQFTDIAVDWIA--QNIYWSDPKENVIEVARLTGQYR---YVLIS--GGVDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 234 ~~~p~~iavD~~~--~~lYwtd~~~~~I~~~~~~g~~~---~~l~~--~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
-..+.++++.+.. +.+..+-...+.|.+.++..... ..+.. .......+++++|...+|+.+.. .+.|...
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~--Dg~I~vw 281 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLW 281 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS--SSCEECC
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC--CCEEEEE
Confidence 3457889998753 66667766678888888876421 11111 12345678999996666655543 3556555
Q ss_pred ecC
Q psy5792 307 GLD 309 (377)
Q Consensus 307 ~ld 309 (377)
+++
T Consensus 282 d~~ 284 (753)
T 3jro_A 282 KEN 284 (753)
T ss_dssp BCC
T ss_pred ecC
Confidence 554
No 222
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.90 E-value=0.26 Score=45.48 Aligned_cols=191 Identities=7% Similarity=0.002 Sum_probs=109.9
Q ss_pred CCeEEEEEcCCCCceeeEEEEecCCC------CceEEEEEE----CCCCE-EEEEEcCCCcEEEEEcCC-------CCcE
Q psy5792 159 GYDIMGIKYNKNESKVTQVLGPLSKV------SLAAKVDFH----AAEDY-IYWVDIDHGTISRTHRDG-------TGRE 220 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~~~~~~~~~~~------~~~~~l~~d----~~~~~-ly~sd~~~~~I~~~~~~G-------~~~~ 220 (377)
.+.|+..++..........+..+... ..+..+++. +.+.. |+.+. ..+.|...++.. ....
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceee
Confidence 34577777754431000012222333 668899999 76777 55554 567777777654 2222
Q ss_pred -----EEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC---C---CCCceeEEEcCCC
Q psy5792 221 -----NIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG---G---VDQPSALAVDPES 289 (377)
Q Consensus 221 -----~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~---~---~~~P~~iavdp~~ 289 (377)
.+... .......-..+.++++.+.+ ++++-...+.|.+.++........+.. . ......++++|..
T Consensus 169 ~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 169 WSPTLELQGT-VESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp CCCEEEEEEE-ECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred ccCcceeeee-eccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 22100 00000234458899999754 666767778999999986554444443 2 4567999999976
Q ss_pred CeEEEEecCCC---CeEEEEecCCCCeEEEEec-------------CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 290 GYLFWSESGKI---PLIARAGLDGKKQTILAQE-------------IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 290 g~lywtd~g~~---~~I~r~~ldG~~~~~l~~~-------------~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.+|+.+.. . ..|...++........+.. .-.....+++.+.+..|+ +-. ..+.|...++.
T Consensus 246 ~~l~~~~~--d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~dg~i~iwd~~ 321 (397)
T 1sq9_A 246 SLLAIAHD--SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC-SAG-WDGKLRFWDVK 321 (397)
T ss_dssp TEEEEEEE--ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE-EEE-TTSEEEEEETT
T ss_pred CEEEEEec--CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE-EEe-CCCeEEEEEcC
Confidence 66666543 3 5788888764443333332 234567899986555554 444 57888888887
Q ss_pred CCce
Q psy5792 354 GGSK 357 (377)
Q Consensus 354 G~~~ 357 (377)
.+..
T Consensus 322 ~~~~ 325 (397)
T 1sq9_A 322 TKER 325 (397)
T ss_dssp TTEE
T ss_pred CCce
Confidence 5433
No 223
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.87 E-value=0.24 Score=44.55 Aligned_cols=242 Identities=11% Similarity=0.068 Sum_probs=137.3
Q ss_pred CCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccC
Q psy5792 57 DAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPL 133 (377)
Q Consensus 57 ~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~ 133 (377)
......+|++ .++.+..+-..++.|...+ .++.....+..... ...+.+ .++.+
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~-~~~~~---------------------- 68 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKF-IARKN---------------------- 68 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-EGGGT----------------------
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEE-eCCCC----------------------
Confidence 3445677888 3444555555667788888 55655555543333 333332 33222
Q ss_pred CCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEE
Q psy5792 134 SKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRT 212 (377)
Q Consensus 134 ~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~ 212 (377)
++++....+.|+..++..... +..+ .....+.++++.+.+..|. +-...+.|...
T Consensus 69 ------------------~l~s~s~d~~i~vwd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~lW 124 (304)
T 2ynn_A 69 ------------------WIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPDYIRSIAVHPTKPYVL-SGSDDLTVKLW 124 (304)
T ss_dssp ------------------EEEEEETTSEEEEEETTTCCE-----EEEEECCSSCEEEEEECSSSSEEE-EEETTSCEEEE
T ss_pred ------------------EEEEECCCCEEEEEECCCCcE-----EEEEeCCCCcEEEEEEcCCCCEEE-EECCCCeEEEE
Confidence 333333344688888876533 1112 2334578999998666655 44467888888
Q ss_pred EcCCCC-cEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE-EEEeeCCCCCceeEEEcCC-C
Q psy5792 213 HRDGTG-RENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR-YVLISGGVDQPSALAVDPE-S 289 (377)
Q Consensus 213 ~~~G~~-~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~-~ 289 (377)
++.... ...... ..-..+..+++.+..+.++.+-...++|.+-++..... ..+..........+++.|. +
T Consensus 125 d~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (304)
T 2ynn_A 125 NWENNWALEQTFE-------GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (304)
T ss_dssp EGGGTTEEEEEEC-------CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT
T ss_pred ECCCCcchhhhhc-------ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC
Confidence 886432 222333 23345788999876677777877778999999865432 2333322233456666653 2
Q ss_pred C-eEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 290 G-YLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 290 g-~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
+ +|.-+. ....|...++........+.........+++.+... +..+-. ..++|..-+.....
T Consensus 198 ~~~l~s~s--~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s-~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 198 KPYMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP-IIISGS-EDGTLKIWNSSTYK 261 (304)
T ss_dssp CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS-EEEEEE-TTSCEEEEETTTCC
T ss_pred CCEEEEEc--CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC-EEEEEc-CCCeEEEEECCCCc
Confidence 3 444333 246777777764433332332234566788876544 444555 56777777776443
No 224
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.85 E-value=0.044 Score=55.88 Aligned_cols=115 Identities=4% Similarity=-0.080 Sum_probs=67.0
Q ss_pred cceEEEeccCCeEEEE--cCCC--CEEEEEE----cCCCeEEEEe----eCCCCC-----ceeEEEcCCCCeEEEE-e-c
Q psy5792 237 FTDIAVDWIAQNIYWS--DPKE--NVIEVAR----LTGQYRYVLI----SGGVDQ-----PSALAVDPESGYLFWS-E-S 297 (377)
Q Consensus 237 p~~iavD~~~~~lYwt--d~~~--~~I~~~~----~~g~~~~~l~----~~~~~~-----P~~iavdp~~g~lywt-d-~ 297 (377)
...+++-+. +.+.++ +... .+|.+.+ +++.....+. ...-.. +..++..|....||+. . .
T Consensus 255 ~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred EEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 456677665 555555 3332 3688888 6654443333 111111 1267888877777663 2 2
Q ss_pred CCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCC------CCeEEEEEccCC
Q psy5792 298 GKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVG------SNVLESMDYSGG 355 (377)
Q Consensus 298 g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~------~~~i~~~~~~G~ 355 (377)
....+|+..++++...+.+.... ....++... .+++||++.. . ...++.++.+++
T Consensus 334 ~g~~~l~~~~~~~~~~~~lt~~~-~~v~~~~~~-d~~~i~~~~~-~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 334 DGYKHIHYIKDTVENAIQITSGK-WEAINIFRV-TQDSLFYSSN-EFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp TSCEEEEEESSCSTTCEECSCSS-SCEEEEEEE-CSSEEEEEES-CGGGCTTCBEEEEEECSSS
T ss_pred CCceEEEEEECCCCceEecccCc-eEEEEEEEE-eCCEEEEEEe-cCCCCCceEEEEEEeCCCC
Confidence 22458999998887655544322 223344444 6788998876 3 357888888654
No 225
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.80 E-value=0.3 Score=44.63 Aligned_cols=252 Identities=8% Similarity=0.062 Sum_probs=141.2
Q ss_pred EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCC
Q psy5792 49 VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESK 125 (377)
Q Consensus 49 ~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~ 125 (377)
++++. .+.....++++ .++.+..+-..++.|...+ .+++....+..... +..+++ +++..
T Consensus 48 ~~~l~--gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~-s~~~~-------------- 110 (340)
T 1got_B 48 RRTLR--GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY-APSGN-------------- 110 (340)
T ss_dssp EEEEC--CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEE-CTTSS--------------
T ss_pred heeec--CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEE-CCCCC--------------
Confidence 44443 55566788888 4555666666677888888 66665555543322 333332 23221
Q ss_pred ceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEc
Q psy5792 126 VQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDI 204 (377)
Q Consensus 126 Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~ 204 (377)
+++ +....+.|+..++...... ......+ .....+..+.+.. ++.+. +-.
T Consensus 111 -------------------------~l~-s~~~d~~v~iw~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~-~~~l~-s~s 161 (340)
T 1got_B 111 -------------------------YVA-CGGLDNICSIYNLKTREGN-VRVSRELAGHTGYLSCCRFLD-DNQIV-TSS 161 (340)
T ss_dssp -------------------------EEE-EEETTCEEEEEETTTCSBS-CEEEEEEECCSSCEEEEEEEE-TTEEE-EEE
T ss_pred -------------------------EEE-EEeCCCeEEEEECccCCCc-ceeEEEecCCCccEEEEEECC-CCcEE-EEE
Confidence 333 3333345777777544210 0111111 1233456666665 45544 444
Q ss_pred CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEE
Q psy5792 205 DHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALA 284 (377)
Q Consensus 205 ~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~ia 284 (377)
..+.|...++.......... .....+.++++.+ .++++.+-...+.|...++........+........+++
T Consensus 162 ~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 162 GDTTCALWDIETGQQTTTFT-------GHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp TTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEc-------CCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 56788888886433322332 2344578899987 456667777778899999876554444444455678999
Q ss_pred EcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec-C-CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceE
Q psy5792 285 VDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-I-IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKM 358 (377)
Q Consensus 285 vdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~-~-~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~ 358 (377)
++|...+|..+.. ...|...++........... . ......+++.+.+. +..+-. ..+.|...+...+...
T Consensus 234 ~~p~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~-~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 234 FFPNGNAFATGSD--DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR-LLLAGY-DDFNCNVWDALKADRA 305 (340)
T ss_dssp ECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEE-TTSEEEEEETTTCCEE
T ss_pred EcCCCCEEEEEcC--CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC-EEEEEC-CCCeEEEEEcccCcEe
Confidence 9996555554442 46777777764433222221 1 12456788876544 444445 5677877776544433
No 226
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.76 E-value=0.64 Score=47.95 Aligned_cols=274 Identities=8% Similarity=0.005 Sum_probs=149.4
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEe------CCC--CCceEEEEEE-CCeEEEEcCCCCceEEEcC
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVS------MPD--AAQVVAAVFY-KGRIIYSDANDGNIRSINL 86 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~------~~~--~~~p~~lav~-~~~ly~td~~~~~I~~~~~ 86 (377)
.+.++..|..+ . .|+-+..+-|.+++.... .+.+.. ... .....+|+.. ++.||+... .+.|.+++.
T Consensus 314 ~v~~i~~D~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~-~~Gl~~~~~ 390 (781)
T 3v9f_A 314 SARYIFQDSFN-N-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD-GGGINVFEN 390 (781)
T ss_dssp CEEEEEECSSC-C-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB-SSCEEEEET
T ss_pred eEEEEEEeCCC-C-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC-CCcEEEEEC
Confidence 45677778653 4 466665666899988776 554421 011 2345667764 467777642 356888774
Q ss_pred CCCceEEEec--CC--C-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeC-CCC
Q psy5792 87 DGSNSTVLRN--NA--G-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVN-SGY 160 (377)
Q Consensus 87 ~g~~~~~~~~--~~--~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~-~~~ 160 (377)
.....+.+.. .. . +.++.. . .+..|.++.. .+
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~--------------------------d---------------~~g~lWigt~~~G- 428 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLK--------------------------D---------------SEGNLWFGTYLGN- 428 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEE--------------------------C---------------TTSCEEEEETTEE-
T ss_pred CCCeEEEccCCCCCCCcceEEEEE--------------------------C---------------CCCCEEEEeccCC-
Confidence 3221111110 00 0 111111 0 1123555543 34
Q ss_pred eEEEEEcCCCCceeeEEEEec--CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcc
Q psy5792 161 DIMGIKYNKNESKVTQVLGPL--SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFT 238 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~--~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~ 238 (377)
|.+++...... . .... .....+.++..|. ++.||+... +.|++++.+....+.+...... ......+.
T Consensus 429 -l~~~~~~~~~~---~-~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~--~~~~~~i~ 498 (781)
T 3v9f_A 429 -ISYYNTRLKKF---Q-IIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKKVIHHYDTSNS--QLLENFVR 498 (781)
T ss_dssp -EEEECSSSCEE---E-ECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSSCCEEECTTTS--SCSCSCEE
T ss_pred -EEEEcCCCCcE---E-EeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCeEEecccCccc--ccccceeE
Confidence 66665543311 1 1111 1224577888776 678888764 6799998875444444321000 00124578
Q ss_pred eEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee-CCC--CCceeEEEcCCCCeEEEEecCCCCeE-EEEecCCCCeE
Q psy5792 239 DIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS-GGV--DQPSALAVDPESGYLFWSESGKIPLI-ARAGLDGKKQT 314 (377)
Q Consensus 239 ~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~-~~~--~~P~~iavdp~~g~lywtd~g~~~~I-~r~~ldG~~~~ 314 (377)
+|+.|. .++|+++... +-+.+.+.++...+.+.. .++ ....+|+.|+ +|.|+++.. ..+ .+.+......+
T Consensus 499 ~i~~d~-~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T~---~Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 499 SIAQDS-EGRFWIGTFG-GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS-KGQMWLATG---EGLVCFPSARNFDYQ 572 (781)
T ss_dssp EEEECT-TCCEEEEESS-SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECT-TSCEEEEET---TEEEEESCTTTCCCE
T ss_pred EEEEcC-CCCEEEEEcC-CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC-CCCEEEEEC---CCceEEECCCCCcEE
Confidence 999994 6788776543 348888887665444432 122 3457889986 788888763 355 77766544433
Q ss_pred EEEec-CC--CCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 315 ILAQE-II--MPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 315 ~l~~~-~~--~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.+... .+ ....+++.| .+++||++-. +.|.+++.+..
T Consensus 573 ~~~~~~gl~~~~i~~i~~d-~~g~lW~~t~---~Gl~~~~~~~~ 612 (781)
T 3v9f_A 573 VFQRKEGLPNTHIRAISED-KNGNIWASTN---TGISCYITSKK 612 (781)
T ss_dssp EECGGGTCSCCCCCEEEEC-SSSCEEEECS---SCEEEEETTTT
T ss_pred EccccCCCCCceEEEEEEC-CCCCEEEEcC---CceEEEECCCC
Confidence 33222 12 245688888 4677877644 34777777643
No 227
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.75 E-value=0.36 Score=44.93 Aligned_cols=189 Identities=8% Similarity=-0.018 Sum_probs=111.1
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEE---ecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC-CcEEEEecccc
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLG---PLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT-GRENIIEYVET 228 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~-~~~~i~~~~~~ 228 (377)
+++....+.|+..++..... ..... +......+..+++...++.++.+-...+.|...++... .......
T Consensus 173 l~s~s~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~---- 246 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH---- 246 (380)
T ss_dssp EEEECTTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC----
T ss_pred EEEECCCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC----
Confidence 44444444687777765433 11110 01123457788887767777777777889998888622 2222222
Q ss_pred CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCC-------CCCceeEEEcCCCCeEEEEecCCCC
Q psy5792 229 GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG-------VDQPSALAVDPESGYLFWSESGKIP 301 (377)
Q Consensus 229 ~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~-------~~~P~~iavdp~~g~lywtd~g~~~ 301 (377)
..-..+.++++.+ .+..+.+-...++|.+.++............ .....++++.|...+|+-.. ...
T Consensus 247 ---~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~dg 320 (380)
T 3iz6_a 247 ---GHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY--SNG 320 (380)
T ss_dssp ---CCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC--TTS
T ss_pred ---CcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE--CCC
Confidence 2344588999987 4556677777889999999866544333221 12257899998665555543 256
Q ss_pred eEEEEecCCCCeE-EEEe---cCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 302 LIARAGLDGKKQT-ILAQ---EIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 302 ~I~r~~ldG~~~~-~l~~---~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.|...++...... .+.. ..-.....+++.+.+..| .+-. ..++|..-++.+.
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs-~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL-CTGS-WDKNLKIWAFSGH 376 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE-EEEC-TTSCEEEEECCSS
T ss_pred CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE-EEee-CCCCEEEEecCCC
Confidence 7777776543332 2211 112346788887655544 4444 5667776677643
No 228
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.74 E-value=0.29 Score=43.76 Aligned_cols=265 Identities=10% Similarity=0.044 Sum_probs=149.3
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
..+.++++.+.+++|+ +-+..+.|...++... ...+. ........+++ .++.+.++-..++.|...+ .+++..
T Consensus 24 ~~v~~~~~s~~~~~l~-s~~~dg~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp SCEEEEEECTTSSEEE-EEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CcEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcccchhhc--cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 4678888988766654 4455678888888555 44442 44455778888 3445555555667888888 566655
Q ss_pred EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 92 TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 92 ~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
..+..... +..+.+ +++.. ++++....+.|+..++...
T Consensus 101 ~~~~~~~~~v~~~~~-~~~~~----------------------------------------~l~s~~~d~~i~iwd~~~~ 139 (312)
T 4ery_A 101 KTLKGHSNYVFCCNF-NPQSN----------------------------------------LIVSGSFDESVRIWDVKTG 139 (312)
T ss_dssp EEEECCSSCEEEEEE-CSSSS----------------------------------------EEEEEETTSCEEEEETTTC
T ss_pred EEEcCCCCCEEEEEE-cCCCC----------------------------------------EEEEEeCCCcEEEEECCCC
Confidence 55543322 333332 22211 3333333345888888655
Q ss_pred CceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc-EEEEeccccCCCCCCCCcceEEEeccCCe
Q psy5792 171 ESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR-ENIIEYVETGDPTPVDQFTDIAVDWIAQN 248 (377)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~-~~i~~~~~~~~~~~~~~p~~iavD~~~~~ 248 (377)
.. +..+. ....+..+++.+.+..|+.+. ..+.|...++..... ..+.. ........+++++.+..
T Consensus 140 ~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 206 (312)
T 4ery_A 140 KC-----LKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQCLKTLID-------DDNPPVSFVKFSPNGKY 206 (312)
T ss_dssp CE-----EEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECC-------SSCCCEEEEEECTTSSE
T ss_pred EE-----EEEecCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCceeeEEec-------cCCCceEEEEECCCCCE
Confidence 33 11222 234577899988666665554 567888888864332 22222 22334667889875554
Q ss_pred EEEEcCCCCEEEEEEcCCCeEEEEeeCCCCC--ceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceE
Q psy5792 249 IYWSDPKENVIEVARLTGQYRYVLISGGVDQ--PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKD 326 (377)
Q Consensus 249 lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~--P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~g 326 (377)
| ++-...+.|...++............... .......+..+.+..+-. ....|...++........+...-.....
T Consensus 207 l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 284 (312)
T 4ery_A 207 I-LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS-EDNLVYIWNLQTKEIVQKLQGHTDVVIS 284 (312)
T ss_dssp E-EEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECC-TTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred E-EEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEEC-CCCEEEEEECCCchhhhhhhccCCcEEE
Confidence 4 45555678999998766543333322111 122233334455555432 3567777777655443333322334567
Q ss_pred EEEeCCCCEEEEE
Q psy5792 327 ITLDRKNKRVYWC 339 (377)
Q Consensus 327 lalD~~~~~LYw~ 339 (377)
++..+....|.-+
T Consensus 285 ~~~~p~~~~l~s~ 297 (312)
T 4ery_A 285 TACHPTENIIASA 297 (312)
T ss_dssp EEECSSSSEEEEE
T ss_pred EeecCcCCceEEE
Confidence 7776655555544
No 229
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.71 E-value=0.00021 Score=50.31 Aligned_cols=29 Identities=3% Similarity=-0.160 Sum_probs=24.6
Q ss_pred cCCC-cCCCCCCceeccccCCC-ccc---cCCcC
Q psy5792 115 MGIK-YNKNESKVQQVLGPLSK-VSL---AAKVD 143 (377)
Q Consensus 115 ~~~~-C~~~~g~Cs~~C~~~~~-~~~---~~G~~ 143 (377)
.+.+ |..++|+|+|+|++.++ ++. +.||.
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~ 36 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYS 36 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEE
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCe
Confidence 4578 99999999999999998 576 77875
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.60 E-value=0.76 Score=46.75 Aligned_cols=163 Identities=11% Similarity=0.118 Sum_probs=101.5
Q ss_pred eEEEEEECCCCEEEEEEcC---CCcEEEEEcCCC--CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEc-CC--CCE
Q psy5792 187 AAKVDFHAAEDYIYWVDID---HGTISRTHRDGT--GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSD-PK--ENV 258 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~~---~~~I~~~~~~G~--~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd-~~--~~~ 258 (377)
..++.+.+.+++|+++... ...|+.+++++. ..+.+.. ....-... +++.++.||+.- .. +.+
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~--------~~~~~~~~-~~~~g~~l~~~t~~~~~~~~ 306 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG--------DLDADVSL-VDNKGSTLYLLTNRDAPNRR 306 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC--------SSSSCEEE-EEEETTEEEEEECTTCTTCE
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC--------CCCceEEE-EeccCCEEEEEECCCCCCCE
Confidence 5678888888888877542 258999998654 3344443 22222222 555578887763 32 579
Q ss_pred EEEEEcCCCeE---EEEeeCCCCCceeEEEcCCCCeEEEEecC-CCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCC
Q psy5792 259 IEVARLTGQYR---YVLISGGVDQPSALAVDPESGYLFWSESG-KIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNK 334 (377)
Q Consensus 259 I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~lywtd~g-~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~ 334 (377)
|.++++++... +.++....... .+.+.+++|+++... ...+|+..+++|...+.+.........++..++.++
T Consensus 307 l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 307 LVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCS
T ss_pred EEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCC
Confidence 99999987543 45655432222 556667888887542 245899999998765554322223334555555667
Q ss_pred EEEEEEe--CCCCeEEEEEccCCceEEEE
Q psy5792 335 RVYWCYS--VGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 335 ~LYw~d~--~~~~~i~~~~~~G~~~~~~~ 361 (377)
+|+++-. .....|+.+++.++..+.+.
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred EEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 7887654 13478999999866555443
No 231
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.54 E-value=0.28 Score=44.55 Aligned_cols=161 Identities=11% Similarity=0.055 Sum_probs=98.8
Q ss_pred EEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC----CcEEEEEcCCCCcEEEEeccccCCCCCCCCc
Q psy5792 162 IMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH----GTISRTHRDGTGRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 162 I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~----~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p 237 (377)
|..+++++... ..+ .....+.+.+.+++|+++.... ..|+.+++++...+.+.. .. . +
T Consensus 45 l~~~d~~~~~~---~~l------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-------~~-~-~ 106 (347)
T 2gop_A 45 IVIENLKNNAR---RFI------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-------AK-N-I 106 (347)
T ss_dssp EEEEETTTCCE---EEE------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-------ES-E-E
T ss_pred EEEEeCCCCce---EEc------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-------CC-C-c
Confidence 66666665533 111 3466778888888888876432 358889988765555544 12 2 6
Q ss_pred ceEEEeccCCeEEEEcCC--------------------------CCEEEEEEcCCCeE-EEEeeCCCCCceeEEEcCCCC
Q psy5792 238 TDIAVDWIAQNIYWSDPK--------------------------ENVIEVARLTGQYR-YVLISGGVDQPSALAVDPESG 290 (377)
Q Consensus 238 ~~iavD~~~~~lYwtd~~--------------------------~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g 290 (377)
.+++..+.++.|+++... ..+|.+.++++... +.+.. . ....++..|..
T Consensus 107 ~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg- 182 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-
T ss_pred cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-
Confidence 777777777778877421 35799999987765 55544 2 67889999855
Q ss_pred eEEEEecCC-------CCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCC-------CCeEEEEE
Q psy5792 291 YLFWSESGK-------IPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVG-------SNVLESMD 351 (377)
Q Consensus 291 ~lywtd~g~-------~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~-------~~~i~~~~ 351 (377)
.+|.+.... ...|+..+ .|. .+.+... .....+ .+.+++|+++.. . ...|+.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~--~~~~~~--spdg~~l~~~~~-~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK--VSFYAV--DSDGERILLYGK-PEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE--ESEEEE--EECSSCEEEEEC-CSSSCCCSSCEEEEEC
T ss_pred EEEEEecccccccccccccEEEeC-CCc-eEEeccC--cceeeE--CCCCCEEEEEEc-cccCCccccceEEEEC
Confidence 555554321 34788888 433 3344332 222222 556777877764 3 35788877
No 232
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.51 E-value=0.06 Score=49.72 Aligned_cols=177 Identities=9% Similarity=-0.046 Sum_probs=91.4
Q ss_pred CeEEEEEcCCCC-ceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC----cEEEEeccccCCCCCC
Q psy5792 160 YDIMGIKYNKNE-SKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG----RENIIEYVETGDPTPV 234 (377)
Q Consensus 160 ~~I~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~----~~~i~~~~~~~~~~~~ 234 (377)
+.|+..++.... . ............+..+++.+.+..|+... ..+.|...+++... ...+.. ..-
T Consensus 77 ~~v~vwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~-------~h~ 146 (377)
T 3dwl_C 77 RNAYVYEKRPDGTW--KQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKR-------PLR 146 (377)
T ss_dssp SSEEEC------CC--CCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECS-------SCC
T ss_pred CeEEEEEcCCCCce--eeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeec-------ccC
Confidence 347777776543 1 01122222345578899988666666555 46778777776433 222221 134
Q ss_pred CCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCe---------------EEEEee--CCCCCceeEEEcCCCCeEEEEec
Q psy5792 235 DQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQY---------------RYVLIS--GGVDQPSALAVDPESGYLFWSES 297 (377)
Q Consensus 235 ~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~---------------~~~l~~--~~~~~P~~iavdp~~g~lywtd~ 297 (377)
..+.++++.+.+ ++..+-...+.|...++.... ...++. ........++++|...+|+....
T Consensus 147 ~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 147 STILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp SCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred CCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 458899998754 444555555778888874110 111111 23445789999997776776653
Q ss_pred CCCCeEEEEecCCCCe-----EEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 298 GKIPLIARAGLDGKKQ-----TILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 298 g~~~~I~r~~ldG~~~-----~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
...|...++..... ..+.. .......+++.+. +++..+-. . +.+.....+
T Consensus 226 --d~~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~-~~~l~~~~-~-~~~~~~~~~ 280 (377)
T 3dwl_C 226 --DSSVTIAYPSAPEQPPRALITVKL-SQLPLRSLLWANE-SAIVAAGY-N-YSPILLQGN 280 (377)
T ss_dssp --TTEEC-CEECSTTSCEEECCCEEC-SSSCEEEEEEEET-TEEEEEES-S-SSEEEECCC
T ss_pred --CCcEEEEECCCCCCcceeeEeecC-CCCceEEEEEcCC-CCEEEEEc-C-CcEEEEEeC
Confidence 45666666654332 22222 2345678888765 44444433 3 334455554
No 233
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.51 E-value=0.58 Score=44.26 Aligned_cols=171 Identities=11% Similarity=0.019 Sum_probs=94.4
Q ss_pred CeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcc
Q psy5792 160 YDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFT 238 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~ 238 (377)
+.|+..++..... +..+. ....+.+++++ +..++... ..+.|...++.......... .....+.
T Consensus 259 g~i~iwd~~~~~~-----~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~i~d~~~~~~~~~~~-------~~~~~v~ 323 (445)
T 2ovr_B 259 FMVKVWDPETETC-----LHTLQGHTNRVYSLQFD--GIHVVSGS-LDTSIRVWDVETGNCIHTLT-------GHQSLTS 323 (445)
T ss_dssp SCEEEEEGGGTEE-----EEEECCCSSCEEEEEEC--SSEEEEEE-TTSCEEEEETTTCCEEEEEC-------CCCSCEE
T ss_pred CEEEEEECCCCcE-----eEEecCCCCceEEEEEC--CCEEEEEe-CCCeEEEEECCCCCEEEEEc-------CCcccEE
Confidence 4588777765422 22222 23456777774 56665554 56888888886433322222 2233456
Q ss_pred eEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC---CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC-CCeE
Q psy5792 239 DIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG---GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-KKQT 314 (377)
Q Consensus 239 ~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~---~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG-~~~~ 314 (377)
+++.+ ++++++-...+.|.+.++........+.. ......+++.++ .+|+.+.. .+.|...++.. ....
T Consensus 324 ~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~--dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 324 GMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSD--DGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEET--TSEEEEEETTTCCEEE
T ss_pred EEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC--CEEEEEeC--CCeEEEEECCCCceee
Confidence 66665 34556666678899999865443333332 234457788864 45555542 46788777764 3334
Q ss_pred EEEec----CCCCceEEEEeCCCCEEEEEEeCCCC----eEEEEEccC
Q psy5792 315 ILAQE----IIMPIKDITLDRKNKRVYWCYSVGSN----VLESMDYSG 354 (377)
Q Consensus 315 ~l~~~----~~~~P~glalD~~~~~LYw~d~~~~~----~i~~~~~~G 354 (377)
.+... .-..+..+++++. +.+..+-. ..+ +|...+++.
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~-~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNT-KLVCAVGS-RNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSS-EEEEEEEC-SSSSSCCEEEEEECCC
T ss_pred eeeccccCCCCceEEEEEecCC-EEEEEEcc-cCCCCccEEEEEECCC
Confidence 44221 1244677888643 33333333 333 377777664
No 234
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.45 E-value=0.52 Score=42.99 Aligned_cols=258 Identities=7% Similarity=-0.045 Sum_probs=142.1
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCc-
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSN- 90 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~- 90 (377)
+.+.+++..+++..| .+-+..+.|..-|.... ...+. ........+++ .++....+-..++.|...+ ..+..
T Consensus 56 ~~v~~~~~s~d~~~l-~s~s~Dg~v~iWd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 56 AKIYAMHWGTDSRLL-LSASQDGKLIIWDSYTTNKVHAIP--LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp SCEEEEEECTTSSEE-EEEETTTEEEEEETTTCCEEEEEE--CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CceEEEEECCCCCEE-EEEeCCCcEEEEECCCCCcceEee--cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 356677777765444 45556788888887555 55443 34445677777 3334444444556666666 33221
Q ss_pred ---eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEE
Q psy5792 91 ---STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIK 166 (377)
Q Consensus 91 ---~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~ 166 (377)
...+..... +..+.. .+ +..++.+. ..+.|+..+
T Consensus 133 ~~~~~~~~~h~~~v~~~~~-~~----------------------------------------~~~l~s~s-~d~~i~~wd 170 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRF-LD----------------------------------------DNQIVTSS-GDTTCALWD 170 (340)
T ss_dssp CEEEEEEECCSSCEEEEEE-EE----------------------------------------TTEEEEEE-TTSCEEEEE
T ss_pred ceeEEEecCCCccEEEEEE-CC----------------------------------------CCcEEEEE-CCCcEEEEE
Confidence 111211111 222221 11 11233333 233577777
Q ss_pred cCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc
Q psy5792 167 YNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 167 l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
+..... +..+. ....+.++++.+.+. ++.+-...+.|...++.......... .....+.++++.+.
T Consensus 171 ~~~~~~-----~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~ 237 (340)
T 1got_B 171 IETGQQ-----TTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTFT-------GHESDINAICFFPN 237 (340)
T ss_dssp TTTTEE-----EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEEC-------CCSSCEEEEEECTT
T ss_pred CCCCcE-----EEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEEEEc-------CCcCCEEEEEEcCC
Confidence 765422 22222 334578899988544 55555567889888886544333333 23445889999974
Q ss_pred CCeEEEEcCCCCEEEEEEcCCCeEEEEeeC--CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCC
Q psy5792 246 AQNIYWSDPKENVIEVARLTGQYRYVLISG--GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMP 323 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~--~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~ 323 (377)
++++.+-...++|.+.++........... .......++++|...+|..... ...|...++........+...-..
T Consensus 238 -~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~--d~~i~vwd~~~~~~~~~~~~h~~~ 314 (340)
T 1got_B 238 -GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD--DFNCNVWDALKADRAGVLAGHDNR 314 (340)
T ss_dssp -SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECCSSC
T ss_pred -CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC--CCeEEEEEcccCcEeeEeecCCCc
Confidence 55666766778899999876554333321 1234688999996555555542 467777776544333333322244
Q ss_pred ceEEEEeCCCC
Q psy5792 324 IKDITLDRKNK 334 (377)
Q Consensus 324 P~glalD~~~~ 334 (377)
...+++.+.+.
T Consensus 315 v~~~~~s~dg~ 325 (340)
T 1got_B 315 VSCLGVTDDGM 325 (340)
T ss_dssp EEEEEECTTSS
T ss_pred EEEEEEcCCCC
Confidence 56677754333
No 235
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.41 E-value=0.00065 Score=44.72 Aligned_cols=25 Identities=8% Similarity=-0.132 Sum_probs=21.6
Q ss_pred cCCCCCCceeccccCCCccc---cCCcC
Q psy5792 119 YNKNESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 119 C~~~~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
|..++++|+|+|++.++++. +.||.
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYV 28 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEE
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcE
Confidence 66788999999999999988 77775
No 236
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.40 E-value=0.49 Score=42.23 Aligned_cols=244 Identities=11% Similarity=0.085 Sum_probs=132.6
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCC---c-EEEEEeCCCCCceEEEEEE---CCeEEEEcCCCCceEEEc-CCC
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEV---K-VAKVVSMPDAAQVVAAVFY---KGRIIYSDANDGNIRSIN-LDG 88 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG---~-~~~i~~~~~~~~p~~lav~---~~~ly~td~~~~~I~~~~-~~g 88 (377)
.+.++++++.+.+| .+-+..+.|...++++ . ..++. .+.....++++. .+.+..|-..++.|...+ .+|
T Consensus 11 ~V~~~~~s~~g~~l-as~s~D~~v~iw~~~~~~~~~~~~l~--gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 11 MIHDAVMDYYGKRM-ATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp CEEEEEECTTSSEE-EEEETTSCEEEEEBCSSCBCCCEEEC--CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS
T ss_pred ceEEEEECCCCCEE-EEEeCCCEEEEEecCCCCcEEEEEEc--cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC
Confidence 56788888876665 4445678899888864 3 44453 445556788883 256666666677888877 444
Q ss_pred C--ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 89 S--NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 89 ~--~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
+ ....+..... +..+.+ +++.. ..++++....+.|+..
T Consensus 88 ~~~~~~~~~~h~~~v~~v~~-~p~~~--------------------------------------g~~l~s~s~d~~v~~w 128 (297)
T 2pm7_B 88 RWSQIAVHAVHSASVNSVQW-APHEY--------------------------------------GPMLLVASSDGKVSVV 128 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEE-CCGGG--------------------------------------CSEEEEEETTSEEEEE
T ss_pred ceEEEEEeecCCCceeEEEe-CcCCC--------------------------------------CcEEEEEECCCcEEEE
Confidence 3 2222322112 333332 22100 1133333333467777
Q ss_pred EcCCCCceeeEEEEecCCCCceEEEEEECCC------------CEEEEEEcCCCcEEEEEcCCCCcE--E--EEeccccC
Q psy5792 166 KYNKNESKVTQVLGPLSKVSLAAKVDFHAAE------------DYIYWVDIDHGTISRTHRDGTGRE--N--IIEYVETG 229 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~------------~~ly~sd~~~~~I~~~~~~G~~~~--~--i~~~~~~~ 229 (377)
++..... ............+..+++.+.. +.++.+-...+.|...+++..... . ...
T Consensus 129 d~~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~----- 201 (297)
T 2pm7_B 129 EFKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE----- 201 (297)
T ss_dssp EBCSSSC--BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-----
T ss_pred EecCCCc--eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-----
Confidence 7764421 0011111223346677776642 345555556677777776543311 1 121
Q ss_pred CCCCCCCcceEEEeccC--CeEEEEcCCCCEEEEEEcCCC---eEEEEee--CCCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5792 230 DPTPVDQFTDIAVDWIA--QNIYWSDPKENVIEVARLTGQ---YRYVLIS--GGVDQPSALAVDPESGYLFWSESGKIPL 302 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~--~~lYwtd~~~~~I~~~~~~g~---~~~~l~~--~~~~~P~~iavdp~~g~lywtd~g~~~~ 302 (377)
..-..+.++++.+.. +.++.+-...++|..-+++.. ....++. ........++.+|....|.-+.....-+
T Consensus 202 --~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~ 279 (297)
T 2pm7_B 202 --GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (297)
T ss_dssp --CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred --CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 223457889988753 466677666778888887653 2233332 1223457889998666665554322346
Q ss_pred EEEEecCCC
Q psy5792 303 IARAGLDGK 311 (377)
Q Consensus 303 I~r~~ldG~ 311 (377)
|+....+|.
T Consensus 280 lw~~~~~g~ 288 (297)
T 2pm7_B 280 LWKENLEGK 288 (297)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCc
Confidence 666666654
No 237
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.40 E-value=0.15 Score=48.57 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=103.6
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEc
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARL 264 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~ 264 (377)
..+.++++++.+..+..+-..++.|...+++......+... ...-..+.+|++.+.+++++++-...++|.+-++
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-----~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-----IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-----CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-----cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 35788999986666666655678898888875544444320 0123458899998777777788777889999999
Q ss_pred CCCeEEEEeeCC--CCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeC
Q psy5792 265 TGQYRYVLISGG--VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSV 342 (377)
Q Consensus 265 ~g~~~~~l~~~~--~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~ 342 (377)
.+.....+.... ......++++|...+|..... .+.|...+++|.....+... -.....+++.+.+..++.+-.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~--dg~i~~wd~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~s~s- 270 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN--VGNVILLNMDGKELWNLRMH-KKKVTHVALNPCCDWFLATAS- 270 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS--SSBEEEEESSSCBCCCSBCC-SSCEEEEEECTTCSSEEEEEE-
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC--CCcEeeeccCcceeEEEecc-cceEEeeeecCCCceEEEEec-
Confidence 988766665432 223468899986555555542 56788888887543332211 234677888766666666655
Q ss_pred CCCeEEEEEcc
Q psy5792 343 GSNVLESMDYS 353 (377)
Q Consensus 343 ~~~~i~~~~~~ 353 (377)
..+.|...++.
T Consensus 271 ~d~~v~iwd~~ 281 (435)
T 4e54_B 271 VDQTVKIWDLR 281 (435)
T ss_dssp TTSBCCEEETT
T ss_pred CcceeeEEecc
Confidence 55555555543
No 238
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.54 Score=48.39 Aligned_cols=187 Identities=11% Similarity=0.039 Sum_probs=103.6
Q ss_pred EEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECC--CCEEEEEEcCCCcEEEEEcCCCC--cEEEEeccccC
Q psy5792 154 FSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAA--EDYIYWVDIDHGTISRTHRDGTG--RENIIEYVETG 229 (377)
Q Consensus 154 ~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~--~~~ly~sd~~~~~I~~~~~~G~~--~~~i~~~~~~~ 229 (377)
++....|.|+..++..... ............+..+++.+. +..++.+. ..+.|...++.... ......
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs-~dg~I~vwdl~~~~~~~~~~~~----- 142 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENGTTSPIIID----- 142 (753)
T ss_dssp EEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCSSSCCCCEEEE-----
T ss_pred EEEeCCCeEEEEECCCCcc--cccccccCCCCCeEEEEECCCCCCCEEEEEe-CCCcEEEEEeecCCCcceeEee-----
Confidence 3333334588777766532 111222223456889999886 55555544 67888888886542 222222
Q ss_pred CCCCCCCcceEEEecc------------CCeEEEEcCCCCEEEEEEcCCCe----EEEEeeCCCCCceeEEEcCCC--Ce
Q psy5792 230 DPTPVDQFTDIAVDWI------------AQNIYWSDPKENVIEVARLTGQY----RYVLISGGVDQPSALAVDPES--GY 291 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~------------~~~lYwtd~~~~~I~~~~~~g~~----~~~l~~~~~~~P~~iavdp~~--g~ 291 (377)
.....+..+++.+. .+.++.+-...+.|.+.++.... ....+........+++++|.. +.
T Consensus 143 --~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~ 220 (753)
T 3jro_A 143 --AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (753)
T ss_dssp --CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred --cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence 23445778888864 34555666666788888876542 112223334567899999973 44
Q ss_pred EEEEecCCCCeEEEEecCCCC---eEEEEec--CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 292 LFWSESGKIPLIARAGLDGKK---QTILAQE--IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 292 lywtd~g~~~~I~r~~ldG~~---~~~l~~~--~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
++.+-.. .+.|...++.... ...+... .-....++++.+.+..| .+-. ..+.|...+++
T Consensus 221 ~l~s~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-~s~s-~Dg~I~vwd~~ 284 (753)
T 3jro_A 221 YLASVSQ-DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSG-GDNKVTLWKEN 284 (753)
T ss_dssp EEEEEES-SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCE-EEEC-SSSCEECCBCC
T ss_pred EEEEEec-CCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEE-EEEc-CCCEEEEEecC
Confidence 4444332 4566666655432 1111111 12345678887655444 4444 45667666665
No 239
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.39 E-value=0.53 Score=42.50 Aligned_cols=232 Identities=8% Similarity=0.015 Sum_probs=121.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--E-CCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--Y-KGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~-~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
..+.+++..+.+..|+ +-+..+.|...+++.. ...+. ........+++ . ++.++++-..++.|...+ .+++.
T Consensus 87 ~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVF-TASCDKTAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp SCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred CCEEEEEECcCCCEEE-EEcCCCcEEEEEcCCCCceeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 3677888888666665 4455788999999887 55554 44556777877 3 445566656677888888 56655
Q ss_pred eEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC
Q psy5792 91 STVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN 170 (377)
Q Consensus 91 ~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~ 170 (377)
...+........+... ...++.+..+ +.+...++...
T Consensus 164 ~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~-~~i~~~~~~~~ 200 (368)
T 3mmy_A 164 MMVLQLPERCYCADVI------------------------------------------YPMAVVATAE-RGLIVYQLENQ 200 (368)
T ss_dssp SEEEECSSCEEEEEEE------------------------------------------TTEEEEEEGG-GCEEEEECSSS
T ss_pred EEEEecCCCceEEEec------------------------------------------CCeeEEEeCC-CcEEEEEeccc
Confidence 5544422111111110 0122222221 23666666544
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCC---EEEEEEcCCCcEEEEEcCCCC----cEEEEeccccCC----CCCCCCcce
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAED---YIYWVDIDHGTISRTHRDGTG----RENIIEYVETGD----PTPVDQFTD 239 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~---~ly~sd~~~~~I~~~~~~G~~----~~~i~~~~~~~~----~~~~~~p~~ 239 (377)
.. ...............+.+..... ..+++-...+.|...+++... ...+........ ......+.+
T Consensus 201 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 201 PS--EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp CE--EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE
T ss_pred cc--hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEE
Confidence 32 00111001111122222222111 223333356777777776432 112211000000 000014778
Q ss_pred EEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEe
Q psy5792 240 IAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSE 296 (377)
Q Consensus 240 iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd 296 (377)
+++.+.+..| ++-...+.|.+.++........+........+++++|...+|..+.
T Consensus 279 ~~~sp~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 279 IAFHPVHGTL-ATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEECTTTCCE-EEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEecCCCEE-EEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 9998755555 4555567899999987655444444455678999999777777764
No 240
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.36 E-value=0.56 Score=42.48 Aligned_cols=163 Identities=12% Similarity=0.040 Sum_probs=87.6
Q ss_pred eEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcC--------------------------CCcEEEEEc
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDID--------------------------HGTISRTHR 214 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~--------------------------~~~I~~~~~ 214 (377)
.|..+++++... ..+.... . +.++++.+.++.|+++... ...|+.+++
T Consensus 86 ~l~~~~~~~g~~---~~l~~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 159 (347)
T 2gop_A 86 EIWVADLETLSS---KKILEAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT 159 (347)
T ss_dssp EEEEEETTTTEE---EEEEEES--E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred eEEEEECCCCce---EEEEcCC--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence 377777776533 2222222 2 6778888878888887532 257888888
Q ss_pred CCCCc-EEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCC--------CCEEEEEEcCCCeEEEEeeCCCCCceeEEE
Q psy5792 215 DGTGR-ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPK--------ENVIEVARLTGQYRYVLISGGVDQPSALAV 285 (377)
Q Consensus 215 ~G~~~-~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~--------~~~I~~~~~~g~~~~~l~~~~~~~P~~iav 285 (377)
++... +.+.. . .+..+++.+.+ .+|.+... ...|+..+ .|. .+.+... ..... +
T Consensus 160 ~~~~~~~~l~~--------~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~--~~~~~--~ 222 (347)
T 2gop_A 160 ESEEVIEEFEK--------P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK--VSFYA--V 222 (347)
T ss_dssp TTTEEEEEEEE--------E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE--ESEEE--E
T ss_pred CCCeEEeeecC--------C--CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-eEEeccC--cceee--E
Confidence 76554 33322 1 46677777644 44444332 33688888 443 3344432 22222 3
Q ss_pred cCCCCeEEEEecC------CCCeEEEEecCCCCeEEEEecCCCCceE-EEEeCCCCEEEEEEeCCC--CeEEEEEccC
Q psy5792 286 DPESGYLFWSESG------KIPLIARAGLDGKKQTILAQEIIMPIKD-ITLDRKNKRVYWCYSVGS--NVLESMDYSG 354 (377)
Q Consensus 286 dp~~g~lywtd~g------~~~~I~r~~ldG~~~~~l~~~~~~~P~g-lalD~~~~~LYw~d~~~~--~~i~~~~~~G 354 (377)
.|.+.+|+++... ...+|+..+ .|. .+.+....-..... ++.. ++ +|++.. .. ..|+ ++ +|
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~~~~~~~~~~~~s--dg-~~~~~~-~~~~~~l~-~~-~g 292 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD-GKE-VMGILDEVDRGVGQAKIKD--GK-VYFTLF-EEGSVNLY-IW-DG 292 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC-SSC-EEESSTTCCSEEEEEEEET--TE-EEEEEE-ETTEEEEE-EE-SS
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC-CCc-eEeccccCCcccCCccEEc--Cc-EEEEEe-cCCcEEEE-Ec-CC
Confidence 7777778776532 135788888 433 33333221122333 5553 44 776644 33 3555 66 54
No 241
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.52 Score=41.59 Aligned_cols=240 Identities=14% Similarity=0.079 Sum_probs=133.9
Q ss_pred CCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccC
Q psy5792 56 PDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPL 133 (377)
Q Consensus 56 ~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~ 133 (377)
.+......+++.++..+++-..++.|...+ .++.....+..... +..+.+ +++..
T Consensus 16 ~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~-~~~~~---------------------- 72 (313)
T 3odt_A 16 GHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCY-DSEKE---------------------- 72 (313)
T ss_dssp CCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEE-ETTTT----------------------
T ss_pred CCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEE-CCCCC----------------------
Confidence 445566777775454455555667888888 55544444443333 444443 33222
Q ss_pred CCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEE
Q psy5792 134 SKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRT 212 (377)
Q Consensus 134 ~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~ 212 (377)
+++.+. ..+.|+..++..... ...+..+ .....+..++++ ++.++.+. ..+.|...
T Consensus 73 -----------------~l~~~~-~dg~i~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~--~~~l~~~~-~d~~i~~~ 129 (313)
T 3odt_A 73 -----------------LLLFGG-KDTMINGVPLFATSG--EDPLYTLIGHQGNVCSLSFQ--DGVVISGS-WDKTAKVW 129 (313)
T ss_dssp -----------------EEEEEE-TTSCEEEEETTCCTT--SCC-CEECCCSSCEEEEEEE--TTEEEEEE-TTSEEEEE
T ss_pred -----------------EEEEec-CCCeEEEEEeeecCC--CCcccchhhcccCEEEEEec--CCEEEEEe-CCCCEEEE
Confidence 344433 334577777754422 1111112 233456778875 55665554 56778777
Q ss_pred EcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeE
Q psy5792 213 HRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYL 292 (377)
Q Consensus 213 ~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~l 292 (377)
+ .+.. ..... .....+..+++.+..++++++-...+.|...+. +.....+..........+++.|. +.+
T Consensus 130 d-~~~~-~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~~~~~i~~~~~~~~-~~~ 198 (313)
T 3odt_A 130 K-EGSL-VYNLQ-------AHNASVWDAKVVSFSENKFLTASADKTIKLWQN-DKVIKTFSGIHNDVVRHLAVVDD-GHF 198 (313)
T ss_dssp E-TTEE-EEEEE-------CCSSCEEEEEEEETTTTEEEEEETTSCEEEEET-TEEEEEECSSCSSCEEEEEEEET-TEE
T ss_pred c-CCcE-EEecc-------cCCCceeEEEEccCCCCEEEEEECCCCEEEEec-CceEEEEeccCcccEEEEEEcCC-CeE
Confidence 7 3222 22222 234457778877645666666666778888883 22333333224556789999984 555
Q ss_pred EEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCce
Q psy5792 293 FWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSK 357 (377)
Q Consensus 293 ywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~ 357 (377)
+... ....|...++........+...-.....+++.+.+ +|+ +-. ..+.|...++..+..
T Consensus 199 ~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~-~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 199 ISCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV-SCG-EDRTVRIWSKENGSL 258 (313)
T ss_dssp EEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE-EEE-TTSEEEEECTTTCCE
T ss_pred EEcc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEE-EEe-cCCEEEEEECCCCce
Confidence 4444 35788888887444433333324567888887654 444 444 567888888764443
No 242
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.25 E-value=1.1 Score=44.68 Aligned_cols=194 Identities=13% Similarity=0.097 Sum_probs=106.9
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceE
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNST 92 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~ 92 (377)
.+.+++..+.++.+..+-+..+.|...+.... ..++. .+.....++++ .++.++.+-..++.|...+ .+|+...
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~--~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG--EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG 226 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec--cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEee
Confidence 45677777776655666677788888886554 44442 44556788898 4566777767778888888 6776655
Q ss_pred EEec-------CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEE
Q psy5792 93 VLRN-------NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMG 164 (377)
Q Consensus 93 ~~~~-------~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~ 164 (377)
.+.. ... +.++.+ +|+. ..+++....+.|+.
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~-spdg----------------------------------------~~l~s~s~D~~v~l 265 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTW-SPDG----------------------------------------TKIASASADKTIKI 265 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEE-CTTS----------------------------------------SEEEEEETTSEEEE
T ss_pred eeccccccccccCCCEEEEEE-CCCC----------------------------------------CEEEEEeCCCeEEE
Confidence 5421 111 333332 2221 23344444446777
Q ss_pred EEcCCCCceeeEEEEecC--CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEE
Q psy5792 165 IKYNKNESKVTQVLGPLS--KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAV 242 (377)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~--~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iav 242 (377)
.++..... ... ++.. ......++.++ .+.+ .+-...+.|...+........... .....+.++++
T Consensus 266 Wd~~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~l-~s~s~d~~i~~~~~~~~~~~~~~~-------gh~~~v~~l~~ 332 (611)
T 1nr0_A 266 WNVATLKV--EKT-IPVGTRIEDQQLGIIWT--KQAL-VSISANGFINFVNPELGSIDQVRY-------GHNKAITALSS 332 (611)
T ss_dssp EETTTTEE--EEE-EECCSSGGGCEEEEEEC--SSCE-EEEETTCCEEEEETTTTEEEEEEC-------CCSSCEEEEEE
T ss_pred EeCCCCce--eee-ecCCCCccceeEEEEEc--CCEE-EEEeCCCcEEEEeCCCCCcceEEc-------CCCCCEEEEEE
Confidence 77765422 111 1111 11223445443 3333 333356677777765433222222 23345888999
Q ss_pred eccCCeEEEEcCCCCEEEEEEcCCC
Q psy5792 243 DWIAQNIYWSDPKENVIEVARLTGQ 267 (377)
Q Consensus 243 D~~~~~lYwtd~~~~~I~~~~~~g~ 267 (377)
.+.++.| .+-...++|..-++...
T Consensus 333 spdg~~l-~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 333 SADGKTL-FSADAEGHINSWDISTG 356 (611)
T ss_dssp CTTSSEE-EEEETTSCEEEEETTTC
T ss_pred eCCCCEE-EEEeCCCcEEEEECCCC
Confidence 8755555 44444567777776544
No 243
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.25 E-value=0.59 Score=41.58 Aligned_cols=205 Identities=11% Similarity=0.037 Sum_probs=105.5
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc---EEEEEe-CCCCCceEEEEEEC---CeEEEEcCCCCceEEEc-CC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK---VAKVVS-MPDAAQVVAAVFYK---GRIIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~---~~~i~~-~~~~~~p~~lav~~---~~ly~td~~~~~I~~~~-~~ 87 (377)
+.+.+++.++.+..|. +-...+.|...+++.. .+.+.. .........|++.. +.++++-..++.|...+ ..
T Consensus 12 ~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVA-TCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECSSSSEEE-EEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred cceeEEEEcCCCCEEE-EeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 4678888888766554 4455688988888743 222210 14455678888842 55666655677888887 44
Q ss_pred CCc---------eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeC
Q psy5792 88 GSN---------STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVN 157 (377)
Q Consensus 88 g~~---------~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~ 157 (377)
++. ...+..... +.++.+ +++.. ..+++.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~-------------------------------------~~~l~~~~- 131 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKF-APAHL-------------------------------------GLKLACLG- 131 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEE-CCGGG-------------------------------------CSEEEEEE-
T ss_pred CcccccccCcceeeeecccCCceeEEEE-cCCCC-------------------------------------CcEEEEec-
Confidence 421 222222112 333332 22100 11233333
Q ss_pred CCCeEEEEEcCCCCce----eeEEEE-----ecCCCCceEEEEEECC---CCEEEEEEcCCCcEEEEEcCCCCcEEEEec
Q psy5792 158 SGYDIMGIKYNKNESK----VTQVLG-----PLSKVSLAAKVDFHAA---EDYIYWVDIDHGTISRTHRDGTGRENIIEY 225 (377)
Q Consensus 158 ~~~~I~~~~l~~~~~~----~~~~~~-----~~~~~~~~~~l~~d~~---~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~ 225 (377)
..+.|+..++...... ...... +......+..+++.+. ...+..+. ..+.+............+...
T Consensus 132 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 210 (351)
T 3f3f_A 132 NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKL 210 (351)
T ss_dssp TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEEC
T ss_pred CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeec
Confidence 3345777777543320 000000 1123345778888775 55555554 344553333333232222220
Q ss_pred cccCCCCCCCCcceEEEeccCC---eEEEEcCCCCEEEEEEcCC
Q psy5792 226 VETGDPTPVDQFTDIAVDWIAQ---NIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 226 ~~~~~~~~~~~p~~iavD~~~~---~lYwtd~~~~~I~~~~~~g 266 (377)
...-..+.++++.+..+ +++.+-...+.|.+.++..
T Consensus 211 -----~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 211 -----PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp -----CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred -----CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 01233578899987542 6667766677788877764
No 244
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.18 E-value=0.068 Score=49.34 Aligned_cols=240 Identities=9% Similarity=-0.076 Sum_probs=119.3
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEe-CCCCCceEEEEEE-CCeEEEEcCCCCceEEEc-CCCC--
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVS-MPDAAQVVAAVFY-KGRIIYSDANDGNIRSIN-LDGS-- 89 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~-~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~-~~g~-- 89 (377)
+.+.++++.+.+..| .+-+..+.|...++++. .+.+.. .........+++. ++.++++-..++.|...+ .+++
T Consensus 12 ~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEF-VTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SCCSCCEECSSSSEE-ECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CcEEEEEECCCCCEE-EEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 357888998876655 33345677888888765 233211 1334456788883 344455545567788877 4444
Q ss_pred -ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEc
Q psy5792 90 -NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKY 167 (377)
Q Consensus 90 -~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l 167 (377)
....+..... +..+.+ +++. ..|+.+.. .+.|+..++
T Consensus 91 ~~~~~~~~~~~~v~~~~~-~~~~---------------------------------------~~l~~~~~-d~~i~iwd~ 129 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRW-SPNE---------------------------------------DKFAVGSG-ARVISVCYF 129 (377)
T ss_dssp CCEEECCCCSSCEEEEEC-CTTS---------------------------------------SCCEEEES-SSCEEECCC
T ss_pred eeeeEecccCCceEEEEE-CCCC---------------------------------------CEEEEEec-CCeEEEEEE
Confidence 1222221111 333332 2211 12333332 234766666
Q ss_pred CCCCceeeEEEEecC--CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC---------------cEEEEeccccCC
Q psy5792 168 NKNESKVTQVLGPLS--KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG---------------RENIIEYVETGD 230 (377)
Q Consensus 168 ~~~~~~~~~~~~~~~--~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~---------------~~~i~~~~~~~~ 230 (377)
+.... ......+. ....+..+++.+.+..|.... ..+.|...++.... ....... .
T Consensus 130 ~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 202 (377)
T 3dwl_C 130 EQEND--WWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE----Y 202 (377)
T ss_dssp -------CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC----C
T ss_pred CCccc--ceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhc----c
Confidence 54421 00111122 345688999998666665554 45777777764211 1112210 0
Q ss_pred CCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE----EEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR----YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~----~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
.....+.++++.+.+..|+ +-...+.|.+.++..... ...+........++++.|.+.+| .+-. ...+...
T Consensus 203 -~~~~~v~~~~~sp~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~--~~~~~~~ 277 (377)
T 3dwl_C 203 -PSGGWVHAVGFSPSGNALA-YAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV-AAGY--NYSPILL 277 (377)
T ss_dssp -CCSSSEEEEEECTTSSCEE-EEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEE-EEES--SSSEEEE
T ss_pred -cCCceEEEEEECCCCCEEE-EEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEE-EEEc--CCcEEEE
Confidence 1223478899987655554 444557888888876543 11222234456899999854444 4432 2344455
Q ss_pred ecC
Q psy5792 307 GLD 309 (377)
Q Consensus 307 ~ld 309 (377)
..+
T Consensus 278 ~~~ 280 (377)
T 3dwl_C 278 QGN 280 (377)
T ss_dssp CCC
T ss_pred EeC
Confidence 544
No 245
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.16 E-value=0.3 Score=46.40 Aligned_cols=194 Identities=10% Similarity=0.042 Sum_probs=112.1
Q ss_pred cEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecccc
Q psy5792 150 DFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVET 228 (377)
Q Consensus 150 ~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~ 228 (377)
+.++.+....|.|+..+++.... ..+..+. ....+.+++|.+.++.++++-..++.|...++.+...+.+...
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~---~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--- 205 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDK---PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS--- 205 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSC---CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC---
T ss_pred CCEEEEEeCCCEEEEEECCCCCc---eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc---
Confidence 33444444445688888765543 1222222 2345789999876666666666778899999987554444430
Q ss_pred CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 229 GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 229 ~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
.........+++++. +.++++-...+.|...+++++....+. .......+++++|....++.+-.. ...|...++
T Consensus 206 --~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~-d~~v~iwd~ 280 (435)
T 4e54_B 206 --DTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASV-DQTVKIWDL 280 (435)
T ss_dssp --SSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEET-TSBCCEEET
T ss_pred --CCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecC-cceeeEEec
Confidence 011123567888864 556666667789999999887543332 234557899999987777766432 344444444
Q ss_pred CC-CCeEEEEe-c-CCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 309 DG-KKQTILAQ-E-IIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 309 dG-~~~~~l~~-~-~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
.. .....+.. . .-.....+++.+.+..|.-+ . ..+.|...+...+.
T Consensus 281 ~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~-~-~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 281 RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT-D-QKSEIRVYSASQWD 329 (435)
T ss_dssp TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE-E-SSSCEEEEESSSSS
T ss_pred ccccccceEEEeeeccccccceeECCCCCeeEEE-c-CCCEEEEEECCCCc
Confidence 32 21111111 1 12234667776655555544 4 46677777765443
No 246
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.04 E-value=0.00071 Score=44.95 Aligned_cols=25 Identities=4% Similarity=-0.094 Sum_probs=21.0
Q ss_pred cCCCCCCceeccccCCC-ccc---cCCcC
Q psy5792 119 YNKNESKVQQVLGPLSK-VSL---AAKVD 143 (377)
Q Consensus 119 C~~~~g~Cs~~C~~~~~-~~~---~~G~~ 143 (377)
|..++|+|+|+|++.++ ++. +.||.
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~ 30 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYS 30 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCE
Confidence 67788999999999998 566 77875
No 247
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.00 E-value=1.7 Score=44.68 Aligned_cols=154 Identities=12% Similarity=-0.009 Sum_probs=91.8
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEc
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARL 264 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~ 264 (377)
..+.++..|. ++.||+... .+.|++++......+.+.. . ......+.+|+.|. .++||+... +.|.+.+.
T Consensus 407 ~~v~~i~~d~-~g~lWigt~-~~Gl~~~~~~~~~~~~~~~---~--~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~ 476 (781)
T 3v9f_A 407 NSVLCSLKDS-EGNLWFGTY-LGNISYYNTRLKKFQIIEL---E--KNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDL 476 (781)
T ss_dssp SBEEEEEECT-TSCEEEEET-TEEEEEECSSSCEEEECCS---T--TTCCCCEEEEEECT-TSEEEEEET--TEEEEEES
T ss_pred cceEEEEECC-CCCEEEEec-cCCEEEEcCCCCcEEEecc---C--CCCCCeEEEEEECC-CCCEEEEEC--CceEEEeC
Confidence 4577888775 577777653 4578888775432222211 0 01224578899994 677877655 56888888
Q ss_pred CCCeEEEEeeCC-----CCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec-CC--CCceEEEEeCCCCEE
Q psy5792 265 TGQYRYVLISGG-----VDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE-II--MPIKDITLDRKNKRV 336 (377)
Q Consensus 265 ~g~~~~~l~~~~-----~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~-~~--~~P~glalD~~~~~L 336 (377)
+....+.+.... ...+.+|+.|+ .|.|+++..+ ..|.+.+.++...+.+... .+ .....|..|. .++|
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~--~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~l 552 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFG--GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS-KGQM 552 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESS--SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECT-TSCE
T ss_pred CCCeEEecccCcccccccceeEEEEEcC-CCCEEEEEcC--CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC-CCCE
Confidence 764333332211 24578999996 7888888753 4588887765544333221 12 2456788874 5666
Q ss_pred EEEEeCCCCeE-EEEEccCC
Q psy5792 337 YWCYSVGSNVL-ESMDYSGG 355 (377)
Q Consensus 337 Yw~d~~~~~~i-~~~~~~G~ 355 (377)
|++- . +.+ .+.+....
T Consensus 553 Wi~T--~-~Glv~~~d~~~~ 569 (781)
T 3v9f_A 553 WLAT--G-EGLVCFPSARNF 569 (781)
T ss_dssp EEEE--T-TEEEEESCTTTC
T ss_pred EEEE--C-CCceEEECCCCC
Confidence 6554 3 344 77666544
No 248
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.98 E-value=0.86 Score=41.10 Aligned_cols=182 Identities=11% Similarity=0.012 Sum_probs=108.2
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGD 230 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~ 230 (377)
++++....+.|+..++..... +..+ .....+.++++++.+..|. +-...+.|...++.+.....+..
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~vwd~~~~~~~~~~~------ 146 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGET-----YQRFVGHKSDVMSVDIDKKASMII-SGSRDKTIKVWTIKGQCLATLLG------ 146 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEE-----EEEEECCSSCEEEEEECTTSCEEE-EEETTSCEEEEETTSCEEEEECC------
T ss_pred EEEEEeCCCEEEEEECCCCCe-----eEEEccCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEEEEec------
Confidence 344444445688888865532 1112 2344578899988655554 44467888888887644333322
Q ss_pred CCCCCCcceEEEecc-----CCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5792 231 PTPVDQFTDIAVDWI-----AQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIAR 305 (377)
Q Consensus 231 ~~~~~~p~~iavD~~-----~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r 305 (377)
....+..+++.+. .+.++.+-...+.|...++........+.........+++.|...+|.-+.. ...|..
T Consensus 147 --h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~--dg~i~i 222 (319)
T 3frx_A 147 --HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK--DGEIML 222 (319)
T ss_dssp --CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET--TCEEEE
T ss_pred --cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC--CCeEEE
Confidence 2334666777543 2335666666788998888776544444444556789999996555555442 467777
Q ss_pred EecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 306 AGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 306 ~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
-++........+.. -.....+++.+.+..|..+.. ..+...+++
T Consensus 223 wd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~---~~i~v~~~~ 266 (319)
T 3frx_A 223 WNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA---TGIKVFSLD 266 (319)
T ss_dssp EETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET---TEEEEEEET
T ss_pred EECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC---CCcEEEEeC
Confidence 77765443333332 245678888876666655544 335555555
No 249
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.85 E-value=1.3 Score=41.90 Aligned_cols=261 Identities=10% Similarity=0.052 Sum_probs=142.6
Q ss_pred ccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC
Q psy5792 23 KPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG 99 (377)
Q Consensus 23 ~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~ 99 (377)
+.+.+++| ++-+..+.|...++... ..++. ........+++.++.|+.+ ..++.|...+ .+|+....+.....
T Consensus 125 ~~~~g~~l-~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 125 LQFCGNRI-VSGSDDNTLKVWSAVTGKCLRTLV--GHTGGVWSSQMRDNIIISG-STDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp EEEETTEE-EEEETTSCEEEEETTTCCEEEECC--CCSSCEEEEEEETTEEEEE-ETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EEEcCCEE-EEEECCCcEEEEECCCCcEEEEEc--CCCCCEEEEEecCCEEEEE-eCCCeEEEEECCcCcEEEEECCCCC
Confidence 34444444 45556788999998655 44442 4455677888876655554 4567888888 56655555543222
Q ss_pred -ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEE
Q psy5792 100 -ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVL 178 (377)
Q Consensus 100 -p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~ 178 (377)
+..+.. ++ ..++.+ ...+.|+..++..... ...+
T Consensus 201 ~v~~~~~-~~-----------------------------------------~~l~s~-s~dg~i~~wd~~~~~~--~~~~ 235 (445)
T 2ovr_B 201 TVRCMHL-HE-----------------------------------------KRVVSG-SRDATLRVWDIETGQC--LHVL 235 (445)
T ss_dssp CEEEEEE-ET-----------------------------------------TEEEEE-ETTSEEEEEESSSCCE--EEEE
T ss_pred cEEEEEe-cC-----------------------------------------CEEEEE-eCCCEEEEEECCCCcE--EEEE
Confidence 333332 11 123333 3334688888765533 1111
Q ss_pred EecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCE
Q psy5792 179 GPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENV 258 (377)
Q Consensus 179 ~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~ 258 (377)
......+..++++ ++.++... ..+.|...++.......... .....+.++++| +..+++-...+.
T Consensus 236 --~~~~~~v~~~~~~--~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~---~~~l~~~~~d~~ 300 (445)
T 2ovr_B 236 --MGHVAAVRCVQYD--GRRVVSGA-YDFMVKVWDPETETCLHTLQ-------GHTNRVYSLQFD---GIHVVSGSLDTS 300 (445)
T ss_dssp --ECCSSCEEEEEEC--SSCEEEEE-TTSCEEEEEGGGTEEEEEEC-------CCSSCEEEEEEC---SSEEEEEETTSC
T ss_pred --cCCcccEEEEEEC--CCEEEEEc-CCCEEEEEECCCCcEeEEec-------CCCCceEEEEEC---CCEEEEEeCCCe
Confidence 1223446677774 55555544 56888888886433222222 223346666664 444455555678
Q ss_pred EEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEec---CCCCceEEEEeCCCCE
Q psy5792 259 IEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQE---IIMPIKDITLDRKNKR 335 (377)
Q Consensus 259 I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~---~~~~P~glalD~~~~~ 335 (377)
|.+.++........+........+++.+ ...|+.... .+.|...++........+.. .......++.+ .+
T Consensus 301 i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~- 373 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNA--DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN- 373 (445)
T ss_dssp EEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEET--TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SS-
T ss_pred EEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeC--CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CC-
Confidence 9999987654433333334455667665 345555542 46777777754333222221 12335566664 33
Q ss_pred EEEEEeCCCCeEEEEEccCC
Q psy5792 336 VYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 336 LYw~d~~~~~~i~~~~~~G~ 355 (377)
+..+-. ..+.|...++..+
T Consensus 374 ~l~s~~-~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 374 FVITSS-DDGTVKLWDLKTG 392 (445)
T ss_dssp EEEEEE-TTSEEEEEETTTC
T ss_pred EEEEEe-CCCeEEEEECCCC
Confidence 444444 5677777777644
No 250
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=95.84 E-value=0.0013 Score=44.75 Aligned_cols=25 Identities=8% Similarity=0.056 Sum_probs=20.8
Q ss_pred cCCCCCCceeccccCC-Cccc---cCCcC
Q psy5792 119 YNKNESKVQQVLGPLS-KVSL---AAKVD 143 (377)
Q Consensus 119 C~~~~g~Cs~~C~~~~-~~~~---~~G~~ 143 (377)
|..++|+|+|+|++.+ +++. +.||.
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcE
Confidence 6678899999999999 4777 77875
No 251
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.83 E-value=1.9 Score=43.74 Aligned_cols=185 Identities=10% Similarity=0.055 Sum_probs=105.9
Q ss_pred eEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC------------CcEEEEEcCCCCc--EEEEecc
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH------------GTISRTHRDGTGR--ENIIEYV 226 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~------------~~I~~~~~~G~~~--~~i~~~~ 226 (377)
.|+.+++++... . ....+.... ..++++.+.+..||++.... ..|++.++.+... +.+...
T Consensus 148 ~i~v~dl~tg~~--~-~~~~~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~- 222 (695)
T 2bkl_A 148 VLHVIDVDSGEW--S-KVDVIEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER- 222 (695)
T ss_dssp EEEEEETTTCCB--C-SSCCBSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-
T ss_pred EEEEEECCCCCC--c-CCcccCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-
Confidence 589999987643 1 000112211 15677888788899887532 2499999876542 333330
Q ss_pred ccCCCCCCCCcceEEEeccCCeEEEEcCC---CCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEE-ecC-CCC
Q psy5792 227 ETGDPTPVDQFTDIAVDWIAQNIYWSDPK---ENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWS-ESG-KIP 301 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~~~lYwtd~~---~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywt-d~g-~~~ 301 (377)
. ..-....++++.+.++.|+++... ...|+..+..+...+.+... .......+ .+.++ +|+. ++. ...
T Consensus 223 -~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~-~~~~~~~~-~~~g~-l~~~s~~~~~~~ 295 (695)
T 2bkl_A 223 -T---GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG-VGAKYEVH-AWKDR-FYVLTDEGAPRQ 295 (695)
T ss_dssp -C---CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC-SSCCEEEE-EETTE-EEEEECTTCTTC
T ss_pred -C---CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC-CCceEEEE-ecCCc-EEEEECCCCCCC
Confidence 0 011234577888877788776432 34788877655444445442 22223332 24455 6665 432 257
Q ss_pred eEEEEecCCCCe---EEEEecC-CCCceEEEEeCCCCEEEEEEeCC--CCeEEEEEccCCceEEE
Q psy5792 302 LIARAGLDGKKQ---TILAQEI-IMPIKDITLDRKNKRVYWCYSVG--SNVLESMDYSGGSKMQL 360 (377)
Q Consensus 302 ~I~r~~ldG~~~---~~l~~~~-~~~P~glalD~~~~~LYw~d~~~--~~~i~~~~~~G~~~~~~ 360 (377)
+|+++++++... +.++... -....++++. +++|+++.. . ..+|..++++|+..+++
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~-~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYL-KDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEE-ETTEEEEEEEETTCCEEEEC
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEE-ECCEEEEEEEeCCCCeeEEe
Confidence 999999986553 5555432 2234667775 678888765 4 34677777776644443
No 252
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.67 E-value=0.95 Score=45.86 Aligned_cols=166 Identities=10% Similarity=-0.018 Sum_probs=84.0
Q ss_pred eEEEEEECCCCEEEEE--EcCC--CcEEEEE----cCCCCcEEEEeccccCCCCCCC--CcceEEEeccCCeEEE-EcC-
Q psy5792 187 AAKVDFHAAEDYIYWV--DIDH--GTISRTH----RDGTGRENIIEYVETGDPTPVD--QFTDIAVDWIAQNIYW-SDP- 254 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~s--d~~~--~~I~~~~----~~G~~~~~i~~~~~~~~~~~~~--~p~~iavD~~~~~lYw-td~- 254 (377)
...+++.+. +++.++ +... ..|+.++ .++...+.+...........+. ....+++.+.++.||+ +..
T Consensus 255 ~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred EEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 567788776 556555 3222 2588888 5533222111000000001111 0125677766676766 332
Q ss_pred -CCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecC-----CCCeEEEEecCCCC--eEEEEecCC----C
Q psy5792 255 -KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESG-----KIPLIARAGLDGKK--QTILAQEII----M 322 (377)
Q Consensus 255 -~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g-----~~~~I~r~~ldG~~--~~~l~~~~~----~ 322 (377)
...+|.+.++++...+.+... -....+++.. .++.||++... ...+|+++++++.. .+.+.. .+ .
T Consensus 334 ~g~~~l~~~~~~~~~~~~lt~~-~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~-~~~~~~~ 410 (719)
T 1z68_A 334 DGYKHIHYIKDTVENAIQITSG-KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC-HLRKERC 410 (719)
T ss_dssp TSCEEEEEESSCSTTCEECSCS-SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST-TTTTTTB
T ss_pred CCceEEEEEECCCCceEecccC-ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC-ccCCCCC
Confidence 234789999887665444432 2223455554 67889988753 24689999986542 333221 11 1
Q ss_pred CceEEEEeCCCCEEEEEEeC-CCCeEEEEEccCCc
Q psy5792 323 PIKDITLDRKNKRVYWCYSV-GSNVLESMDYSGGS 356 (377)
Q Consensus 323 ~P~glalD~~~~~LYw~d~~-~~~~i~~~~~~G~~ 356 (377)
....+++.+..++|+++-.. ....+...+...+.
T Consensus 411 ~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 411 QYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp CBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred ceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 22345565555666654330 22355566664333
No 253
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.66 E-value=1.3 Score=40.67 Aligned_cols=262 Identities=10% Similarity=-0.025 Sum_probs=141.5
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEcC-CCC---
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSINL-DGS--- 89 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~~-~g~--- 89 (377)
.+.+++..+++.+| .+-+..+.|..-|.... ...+. ........+++ .++....+-..++.|...+. ...
T Consensus 66 ~V~~~~~s~d~~~l-~s~s~Dg~v~vWd~~~~~~~~~~~--~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~ 142 (354)
T 2pbi_B 66 KVLCMDWCKDKRRI-VSSSQDGKVIVWDSFTTNKEHAVT--MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN 142 (354)
T ss_dssp CEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEEE--CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCC
T ss_pred eEEEEEECCCCCEE-EEEeCCCeEEEEECCCCCcceEEe--cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccc
Confidence 56777777765544 45556777888886554 44443 33345667777 34444555455566655552 111
Q ss_pred ---ceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEE
Q psy5792 90 ---NSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGI 165 (377)
Q Consensus 90 ---~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~ 165 (377)
....+..... +..+.+ +++ ...|+.+. ..+.|+..
T Consensus 143 ~~~~~~~~~~h~~~v~~~~~-~~~---------------------------------------~~~l~t~s-~D~~v~lw 181 (354)
T 2pbi_B 143 MAAKKKSVAMHTNYLSACSF-TNS---------------------------------------DMQILTAS-GDGTCALW 181 (354)
T ss_dssp SGGGCEEEEECSSCEEEEEE-CSS---------------------------------------SSEEEEEE-TTSEEEEE
T ss_pred ccccceeeeccCCcEEEEEE-eCC---------------------------------------CCEEEEEe-CCCcEEEE
Confidence 0111111111 111111 111 11333333 33468888
Q ss_pred EcCCCCceeeEEEEecC-CCCceEEEEEECC-CCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEe
Q psy5792 166 KYNKNESKVTQVLGPLS-KVSLAAKVDFHAA-EDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVD 243 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~-~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD 243 (377)
++..... +..+. ....+..+++.+. .+.++++-...+.|...++.......... ..-..+.++++.
T Consensus 182 d~~~~~~-----~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~ 249 (354)
T 2pbi_B 182 DVESGQL-----LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-------THESDVNSVRYY 249 (354)
T ss_dssp ETTTCCE-----EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEEC
T ss_pred eCCCCeE-----EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCCeEEEEEe
Confidence 8765533 11122 2334667777664 23555555567899999986443333333 233458889998
Q ss_pred ccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCC--CCCceeEEEcCCCCeEEEEecCCCCeEEEEecC-CCCeEEEEecC
Q psy5792 244 WIAQNIYWSDPKENVIEVARLTGQYRYVLISGG--VDQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTILAQEI 320 (377)
Q Consensus 244 ~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~--~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld-G~~~~~l~~~~ 320 (377)
+. ++++.+-...++|...++............ ......+++.|...+|+-... ...|...++. |.....+ ...
T Consensus 250 p~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~--d~~i~vwd~~~~~~~~~l-~~h 325 (354)
T 2pbi_B 250 PS-GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN--DYTINVWDVLKGSRVSIL-FGH 325 (354)
T ss_dssp TT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCSEEEEE-CCC
T ss_pred CC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC--CCcEEEEECCCCceEEEE-ECC
Confidence 74 556666666788999998776544343321 234678999986666665543 4677777764 3333332 222
Q ss_pred CCCceEEEEeCCCCEEEE
Q psy5792 321 IMPIKDITLDRKNKRVYW 338 (377)
Q Consensus 321 ~~~P~glalD~~~~~LYw 338 (377)
-.....+++.+.+..|.-
T Consensus 326 ~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 326 ENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp SSCEEEEEECTTSSCEEE
T ss_pred CCcEEEEEECCCCCEEEE
Confidence 345677888655444443
No 254
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.65 E-value=1.5 Score=41.41 Aligned_cols=266 Identities=11% Similarity=0.019 Sum_probs=146.9
Q ss_pred EEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEe
Q psy5792 30 VYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFIL 105 (377)
Q Consensus 30 ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v 105 (377)
+..+-+..+.|...|+... ..++. ........+++..+.++++-..++.|...+ .+|+....+..... +..+.+
T Consensus 134 ~l~sgs~dg~i~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 211 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINKKFLLQLS--GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 211 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEe--CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE
Confidence 4445566788999998666 44442 455677888885554666666778899888 66766666553333 455554
Q ss_pred eecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceee----------
Q psy5792 106 FSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVT---------- 175 (377)
Q Consensus 106 ~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~---------- 175 (377)
.... +..++++....+.|+..++........
T Consensus 212 ~~~~---------------------------------------~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 212 VEYK---------------------------------------NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp EESS---------------------------------------SCEEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred ecCC---------------------------------------CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 2211 011233332333466666654321000
Q ss_pred ---------EEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC
Q psy5792 176 ---------QVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA 246 (377)
Q Consensus 176 ---------~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~ 246 (377)
...........+..+..+ ++.++... ..+.|...++.......... .....+..+++++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~ 322 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVSGH--GNIVVSGS-YDNTLIVWDVAQMKCLYILS-------GHTDRIYSTIYDHER 322 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEEEE--TTEEEEEE-TTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEEETTT
T ss_pred eeccCCCeEEEEEccCccceEEEEcCC--CCEEEEEe-CCCeEEEEECCCCcEEEEec-------CCCCCEEEEEEcCCC
Confidence 000111122234455444 56666555 56788888886433222222 234458889999754
Q ss_pred CeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceE
Q psy5792 247 QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKD 326 (377)
Q Consensus 247 ~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~g 326 (377)
. ..++-...+.|.+.++........+.........+++++ .+|+-+.. .+.|...++........... -.....
T Consensus 323 ~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~--dg~v~vwd~~~~~~~~~~~~-~~~~~~ 396 (464)
T 3v7d_B 323 K-RCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD--KFLVSAAA--DGSIRGWDANDYSRKFSYHH-TNLSAI 396 (464)
T ss_dssp T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS--SEEEEEET--TSEEEEEETTTCCEEEEEEC-TTCCCE
T ss_pred C-EEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC--CEEEEEeC--CCcEEEEECCCCceeeeecC-CCCccE
Confidence 4 445655667899999976554433444455567888863 45555543 46777777775444333332 233445
Q ss_pred EEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 327 ITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 327 lalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
+++.+.+..|.... .+.|...++..+
T Consensus 397 ~~~~~~~~~l~~~~---dg~i~iwd~~~g 422 (464)
T 3v7d_B 397 TTFYVSDNILVSGS---ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEECSSEEEEEE---TTEEEEEETTTC
T ss_pred EEEEeCCCEEEEec---CCeEEEEECCCC
Confidence 56665444443332 356777776643
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.59 E-value=2.5 Score=43.53 Aligned_cols=273 Identities=12% Similarity=0.083 Sum_probs=149.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCC---C--CCceEEEEE-ECCeEEEEcCCCCceEEEcC-C
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMP---D--AAQVVAAVF-YKGRIIYSDANDGNIRSINL-D 87 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~---~--~~~p~~lav-~~~~ly~td~~~~~I~~~~~-~ 87 (377)
..+.++..|.. +.| |+-+..+-|.+++.... .+.+.... . .....+|.. .++.|++.. ..+.|.+++. .
T Consensus 310 ~~i~~i~~D~~-g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt-~~~Gl~~~~~~~ 386 (795)
T 4a2l_A 310 RSVRSIFMDSQ-GGM-WLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGT-NDGGLNLYNPIT 386 (795)
T ss_dssp SCEEEEEECTT-SCE-EEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEE-SSSCEEEECTTT
T ss_pred CcEEEEEEeCC-cCE-EEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEE-CCCCeEEEcCCC
Confidence 45667778865 344 55555566888888766 55442111 1 223566666 355666653 3456888884 3
Q ss_pred CCceEEEecC------C--C-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcE-EEEEeC
Q psy5792 88 GSNSTVLRNN------A--G-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDF-ILFSVN 157 (377)
Q Consensus 88 g~~~~~~~~~------~--~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~-l~~s~~ 157 (377)
++........ . . +.++.. ..+.. |.++..
T Consensus 387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~-----------------------------------------d~~g~~lWigt~ 425 (795)
T 4a2l_A 387 QRFTSYTLQEDESARGIGSNNIKAVYV-----------------------------------------DEKKSLVYIGTH 425 (795)
T ss_dssp CCEEEECCC------CCSCSCEEEEEE-----------------------------------------ETTTTEEEEEET
T ss_pred CcEEEEecCCCCcccCCCCccEEEEEE-----------------------------------------cCCCCEEEEEeC
Confidence 3322221110 0 0 111111 11123 555543
Q ss_pred -CCCeEEEEEcCCCCceeeEEEEec---CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCC
Q psy5792 158 -SGYDIMGIKYNKNESKVTQVLGPL---SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTP 233 (377)
Q Consensus 158 -~~~~I~~~~l~~~~~~~~~~~~~~---~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~ 233 (377)
.+ |.+++...... ...... .....+.++..|. ++.||++.. +.+++++.+....+.+.. ...+..
T Consensus 426 ~~G--l~~~d~~~~~~---~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~---~~~~~~ 494 (795)
T 4a2l_A 426 AGG--LSILHRNSGQV---ENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRSFTTIEK---EKDGTP 494 (795)
T ss_dssp TTE--EEEEETTTCCE---EEECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTEEEECCB---CTTCCB
T ss_pred cCc--eeEEeCCCCcE---EEeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCeEEEccc---cccccc
Confidence 44 77777665432 111110 1123577888886 677888764 578888886433222221 000011
Q ss_pred C--CCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee----CC--CCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5792 234 V--DQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS----GG--VDQPSALAVDPESGYLFWSESGKIPLIAR 305 (377)
Q Consensus 234 ~--~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~----~~--~~~P~~iavdp~~g~lywtd~g~~~~I~r 305 (377)
+ ..+.+|+.| ..++||+... +.+.+.+.++... .+.. .. .....+|+.|+ +|.|+++.. ..|.+
T Consensus 495 ~~~~~i~~i~~d-~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT~---~Gl~~ 566 (795)
T 4a2l_A 495 VVSKQITTLFRD-SHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS-NGIIWVGTR---EGFYC 566 (795)
T ss_dssp CCCCCEEEEEEC-TTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT-TSCEEEEES---SCEEE
T ss_pred cCCceEEEEEEC-CCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC-CCCEEEEeC---CCcee
Confidence 2 347889999 4678887765 4588888776544 3221 11 13457888886 788888764 26888
Q ss_pred EecCCCCeEEEEec-CC--CCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 306 AGLDGKKQTILAQE-II--MPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 306 ~~ldG~~~~~l~~~-~~--~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.+......+.+... .+ ....+++.| .+++|+++-. +.|.+++....
T Consensus 567 ~d~~~~~~~~~~~~~gl~~~~i~~i~~d-~~g~lWi~t~---~Gl~~~~~~~~ 615 (795)
T 4a2l_A 567 FNEKDKQIKRYNTTNGLPNNVVYGILED-SFGRLWLSTN---RGISCFNPETE 615 (795)
T ss_dssp EETTTTEEEEECGGGTCSCSCEEEEEEC-TTSCEEEEET---TEEEEEETTTT
T ss_pred ECCCCCcEEEeCCCCCCchhheEEEEEC-CCCCEEEEcC---CceEEEcCCCC
Confidence 88765433333221 12 235678888 4577776644 56777777644
No 256
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.52 E-value=1.5 Score=40.54 Aligned_cols=162 Identities=9% Similarity=0.027 Sum_probs=92.0
Q ss_pred eEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 187 AAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 187 ~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
+..+.+.+..+..+++-...+.|...++.............. ......+..+++.+.+++++.+-...++|..-++..
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP--SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI 237 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS--SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC--CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC
Confidence 344455554444455555677888888764433333320000 012234667788776788888888888999999863
Q ss_pred --CeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecC-------CCCceEEEEeCCCCEEE
Q psy5792 267 --QYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI-------IMPIKDITLDRKNKRVY 337 (377)
Q Consensus 267 --~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~-------~~~P~glalD~~~~~LY 337 (377)
....++ ........++++.|. +..+.+-. ....|...++............ ......+++.+.+. +.
T Consensus 238 ~~~~~~~~-~~h~~~v~~v~~~p~-~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l 313 (380)
T 3iz6_a 238 TSRAVRTY-HGHEGDINSVKFFPD-GQRFGTGS-DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LL 313 (380)
T ss_dssp TCCCCEEE-CCCSSCCCEEEECTT-SSEEEEEC-SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EE
T ss_pred CCcceEEE-CCcCCCeEEEEEecC-CCeEEEEc-CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EE
Confidence 223333 333456789999985 44444432 2467777777644333322221 12256788876544 44
Q ss_pred EEEeCCCCeEEEEEccCC
Q psy5792 338 WCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 338 w~d~~~~~~i~~~~~~G~ 355 (377)
++-. ..+.|...+...+
T Consensus 314 ~~g~-~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 314 FAGY-SNGDCYVWDTLLA 330 (380)
T ss_dssp EEEC-TTSCEEEEETTTC
T ss_pred EEEE-CCCCEEEEECCCC
Confidence 4455 5677777776533
No 257
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.44 E-value=1.5 Score=40.11 Aligned_cols=252 Identities=8% Similarity=0.021 Sum_probs=141.7
Q ss_pred EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCC
Q psy5792 49 VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESK 125 (377)
Q Consensus 49 ~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~ 125 (377)
.+++. .+......+++ .++...+|-..++.|...+ .++.....+..... +..+++ +|+.
T Consensus 57 ~~~l~--gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~-sp~g--------------- 118 (354)
T 2pbi_B 57 RRTLK--GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY-APSG--------------- 118 (354)
T ss_dssp EEEEE--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEE-CTTS---------------
T ss_pred EEEec--CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEE-CCCC---------------
Confidence 45554 55666788888 3445666666677888888 55655444432222 333322 2221
Q ss_pred ceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCce---eeEEEEecCCCCceEEEEEECCCCEEEEE
Q psy5792 126 VQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESK---VTQVLGPLSKVSLAAKVDFHAAEDYIYWV 202 (377)
Q Consensus 126 Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~d~~~~~ly~s 202 (377)
..+.+....+.++..++...... .....+. .....+.++++.+.+..|+-+
T Consensus 119 -------------------------~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~ 172 (354)
T 2pbi_B 119 -------------------------CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTA 172 (354)
T ss_dssp -------------------------SEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEE
T ss_pred -------------------------CEEEEeeCCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEE
Confidence 24444444445666666432110 0000111 123346788888866666654
Q ss_pred EcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc-CCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCce
Q psy5792 203 DIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI-AQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPS 281 (377)
Q Consensus 203 d~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~-~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~ 281 (377)
. ..+.|...++........+. ..-..+..+++.+. .++++++-...++|...++........+........
T Consensus 173 s-~D~~v~lwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 173 S-GDGTCALWDVESGQLLQSFH-------GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN 244 (354)
T ss_dssp E-TTSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred e-CCCcEEEEeCCCCeEEEEEc-------CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE
Confidence 4 56888888886443333332 23344667777664 356777777778899999876554444444455678
Q ss_pred eEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecC--CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 282 ALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEI--IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 282 ~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~--~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
+++++|....|.-+.. ...|...++.......+.... ......+++.+.+. +..+-. ..+.|...++..+.
T Consensus 245 ~v~~~p~~~~l~s~s~--D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~-~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSD--DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR-LLFAGY-NDYTINVWDVLKGS 317 (354)
T ss_dssp EEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEE-TTSCEEEEETTTCS
T ss_pred EEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC-EEEEEE-CCCcEEEEECCCCc
Confidence 9999996555554443 466777777654433333321 22456778875544 444444 56777777775343
No 258
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.43 E-value=1.6 Score=40.27 Aligned_cols=194 Identities=13% Similarity=0.143 Sum_probs=102.3
Q ss_pred eEEEEE--ECCeEEEEcC-CCCceEEEc-CCCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCc
Q psy5792 61 VVAAVF--YKGRIIYSDA-NDGNIRSIN-LDGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKV 136 (377)
Q Consensus 61 p~~lav--~~~~ly~td~-~~~~I~~~~-~~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~ 136 (377)
+..+++ .+.+|..+.. ..+.|+..+ .+++....+.....+.++++ +|+.+
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~f-spdg~------------------------- 189 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHF-STDGK------------------------- 189 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEE-CTTSS-------------------------
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEE-ccCCc-------------------------
Confidence 455666 3445555443 446677777 56655555543323555553 33322
Q ss_pred cccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCC---cEEEEE
Q psy5792 137 SLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHG---TISRTH 213 (377)
Q Consensus 137 ~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~---~I~~~~ 213 (377)
+++.+..+. +..+....... ............+.+++|.+.+..+..+....+ .++..+
T Consensus 190 --------------~l~s~s~~~--~~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 190 --------------VVAYITGSS--LEVISTVTGSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp --------------EEEEECSSC--EEEEETTTCCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred --------------eEEecccee--EEEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 344444444 66666554422 111111112234678888886666665544332 355555
Q ss_pred cCCCCcEE----EEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCe-EEEEeeCCCCCceeEEEcCC
Q psy5792 214 RDGTGREN----IIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQY-RYVLISGGVDQPSALAVDPE 288 (377)
Q Consensus 214 ~~G~~~~~----i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~ 288 (377)
........ ... .....+.++++.+.++ +..+-...+.|.+.++.... ...+.........++++.|.
T Consensus 252 ~~~~~~~~~~~~~~~-------~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVT-------NRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp EETTEEEEEEEEEEE-------SSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT
T ss_pred cccceecceeeeeec-------CCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC
Confidence 54322211 112 2344578899997544 44555556789999987544 34444444556799999995
Q ss_pred CCeEEEEecCCCCeEEEEec
Q psy5792 289 SGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 289 ~g~lywtd~g~~~~I~r~~l 308 (377)
..+| .+-.. ...|...++
T Consensus 324 g~~l-aS~S~-D~tvrvw~i 341 (365)
T 4h5i_A 324 STYV-ASVSA-ANTIHIIKL 341 (365)
T ss_dssp SCEE-EEEET-TSEEEEEEC
T ss_pred CCEE-EEEeC-CCeEEEEEc
Confidence 4444 44322 244544444
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.41 E-value=2.9 Score=43.08 Aligned_cols=269 Identities=8% Similarity=0.004 Sum_probs=147.1
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCC-----C--CCceEEEEEE-CCe-EEEEcCCCCceEEEcC
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMP-----D--AAQVVAAVFY-KGR-IIYSDANDGNIRSINL 86 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~-----~--~~~p~~lav~-~~~-ly~td~~~~~I~~~~~ 86 (377)
.+.+++.|.+ +.| |+-+..+-|.+++.+.. .+.+.... . .....+|+.. ++. ||+.. ..+.|.+++.
T Consensus 358 ~V~~i~~d~~-g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-~~~Gl~~~d~ 434 (795)
T 4a2l_A 358 VVSCIVEDKD-KNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-HAGGLSILHR 434 (795)
T ss_dssp SEEEEEECTT-SCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-TTTEEEEEET
T ss_pred eeEEEEECCC-CCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-CcCceeEEeC
Confidence 4567777764 345 55555666999998876 65553111 1 2346677774 566 66654 3456888884
Q ss_pred CCCceEEEecC---C---CceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCC
Q psy5792 87 DGSNSTVLRNN---A---GISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGY 160 (377)
Q Consensus 87 ~g~~~~~~~~~---~---~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~ 160 (377)
.....+.+... . .+..+.. ..+..|.++...+
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~-----------------------------------------d~~g~lwigt~~G- 472 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILP-----------------------------------------DGEGNLWLGTLSA- 472 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEE-----------------------------------------CSSSCEEEEESSC-
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEE-----------------------------------------CCCCCEEEEecCc-
Confidence 33232222210 0 0112211 0112366666555
Q ss_pred eEEEEEcCCCCceeeEEEEec---C--CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCC-
Q psy5792 161 DIMGIKYNKNESKVTQVLGPL---S--KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPV- 234 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~---~--~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~- 234 (377)
+.+++.+.... ...... . ....+.++..|. .+.||++.. +.+++++.++... .+... .....+
T Consensus 473 -l~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~-~~~~~---~~~~~l~ 541 (795)
T 4a2l_A 473 -LVRFNPEQRSF---TTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGE--EGLSVFKQEGLDI-QKASI---LPVSNVT 541 (795)
T ss_dssp -EEEEETTTTEE---EECCBCTTCCBCCCCCEEEEEECT-TCCEEEEES--SCEEEEEEETTEE-EECCC---SCSCGGG
T ss_pred -eeEEeCCCCeE---EEccccccccccCCceEEEEEECC-CCCEEEEeC--CceEEEeCCCCeE-EEecC---CCCCCCC
Confidence 88877654322 111110 0 113467888885 677888764 5788888764332 22110 000111
Q ss_pred -CCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee-CCC--CCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 235 -DQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS-GGV--DQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 235 -~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~-~~~--~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
..+.+|+.|. .++|+++-.. .|.+.+.+....+.+.. .++ ....+|+.|+ .|.|+++. ...|.+.+.+.
T Consensus 542 ~~~i~~i~~d~-~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~-~g~lWi~t---~~Gl~~~~~~~ 614 (795)
T 4a2l_A 542 KLFTNCIYEAS-NGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDS-FGRLWLST---NRGISCFNPET 614 (795)
T ss_dssp GSCEEEEEECT-TSCEEEEESS--CEEEEETTTTEEEEECGGGTCSCSCEEEEEECT-TSCEEEEE---TTEEEEEETTT
T ss_pred CCeeEEEEECC-CCCEEEEeCC--CceeECCCCCcEEEeCCCCCCchhheEEEEECC-CCCEEEEc---CCceEEEcCCC
Confidence 2467888884 6778776553 58888887665444322 222 2467889996 78888886 35788888765
Q ss_pred CCeEEEEec-CCC----CceEEEEeCCCCEEEEEEeCCCCeEEEEEc
Q psy5792 311 KKQTILAQE-IIM----PIKDITLDRKNKRVYWCYSVGSNVLESMDY 352 (377)
Q Consensus 311 ~~~~~l~~~-~~~----~P~glalD~~~~~LYw~d~~~~~~i~~~~~ 352 (377)
...+.+... ++. .+.++..| .+++||+.-. +-+.+++.
T Consensus 615 ~~~~~~~~~dGl~~~~f~~~~~~~~-~~G~l~~g~~---~Gl~~~~p 657 (795)
T 4a2l_A 615 EKFRNFTESDGLQSNQFNTASYCRT-SVGQMYFGGI---NGITTFRP 657 (795)
T ss_dssp TEEEEECGGGTCSCSCEEEEEEEEC-TTSCEEEEET---TEEEEECG
T ss_pred CcEEEcCCcCCCccccCccCceeEC-CCCeEEEecC---CceEEEcH
Confidence 443333222 121 13466776 5788888754 33545544
No 260
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.37 E-value=0.0019 Score=43.18 Aligned_cols=25 Identities=8% Similarity=0.005 Sum_probs=22.0
Q ss_pred cCCCCCCceeccccCCCccc---cCCcC
Q psy5792 119 YNKNESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 119 C~~~~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
|..++++|+|+|++.++++. +.||.
T Consensus 4 C~~~~~~C~~~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 4 CSLDNGDCDQFCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp TTTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred ccCCCCCcCcEeEcCCCCeEEeCCCCCE
Confidence 87788999999999999998 77875
No 261
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.23 E-value=2.7 Score=41.72 Aligned_cols=246 Identities=13% Similarity=0.072 Sum_probs=139.2
Q ss_pred eeEeeccccCCC--CcCCccccccCCCCeEEEEeCCCCcEEEEEcC-Cc-EEEEEeCCCCCceEEEEE-ECCeEEEEcCC
Q psy5792 3 YLHVLPYTRNPS--FGAVASTLKPQSGPFVYGVKTLSHSLHYVNIE-VK-VAKVVSMPDAAQVVAAVF-YKGRIIYSDAN 77 (377)
Q Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~d-G~-~~~i~~~~~~~~p~~lav-~~~~ly~td~~ 77 (377)
|-...-|+..|. -+.|..++.+++++.|.... .+.|..-++. +. .+++. .+......+++ .++.+..+-..
T Consensus 4 ~~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~--~~~v~l~~~~~~~~~~~~~--~h~~~v~~~~~spdg~~lasg~~ 79 (611)
T 1nr0_A 4 FSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCN--GTSVYTVPVGSLTDTEIYT--EHSHQTTVAKTSPSGYYCASGDV 79 (611)
T ss_dssp CEEEEEECCCCCCCTTCCCCCEECTTSSEEEEEE--TTEEEEEETTCSSCCEEEC--CCSSCEEEEEECTTSSEEEEEET
T ss_pred cccccEECCCCCcccCceeEEeeCCCCCEEEeCC--CCEEEEecCCCcccCeEec--CCCCceEEEEECCCCcEEEEEeC
Confidence 344455665555 45888888999888886654 4578888886 45 55553 44556778888 44555555555
Q ss_pred CCceEEEc-CCCCce--EEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEE
Q psy5792 78 DGNIRSIN-LDGSNS--TVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFIL 153 (377)
Q Consensus 78 ~~~I~~~~-~~g~~~--~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~ 153 (377)
++.|+..+ .+++.. ..+..... +.++++ +++.+ .|+
T Consensus 80 d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f-s~dg~---------------------------------------~l~ 119 (611)
T 1nr0_A 80 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISW-DSESK---------------------------------------RIA 119 (611)
T ss_dssp TSEEEEEESSSTTCCEEEEEECSSSCEEEEEE-CTTSC---------------------------------------EEE
T ss_pred CCCEEEeECCCCcceeeEeecccCCceEEEEE-CCCCC---------------------------------------EEE
Confidence 67788777 344432 22332222 444443 33322 233
Q ss_pred EEeCCC---CeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC
Q psy5792 154 FSVNSG---YDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG 229 (377)
Q Consensus 154 ~s~~~~---~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~ 229 (377)
.+.... +.|+.. +.... ...+. ....+..++|.+.+...+.+-...+.|...+...........
T Consensus 120 ~~~~~~~~~~~v~~w--d~~~~-----~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~----- 187 (611)
T 1nr0_A 120 AVGEGRERFGHVFLF--DTGTS-----NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG----- 187 (611)
T ss_dssp EEECCSSCSEEEEET--TTCCB-----CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-----
T ss_pred EEECCCCceeEEEEe--eCCCC-----cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-----
Confidence 332211 123322 21111 01112 233478899988766556666667788877765322222222
Q ss_pred CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCC-eEEEEee------CCCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5792 230 DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQ-YRYVLIS------GGVDQPSALAVDPESGYLFWSESGKIPL 302 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~-~~~~l~~------~~~~~P~~iavdp~~g~lywtd~g~~~~ 302 (377)
..-..+.++++.+. +.++.+-...++|..-++... ...++.. .......++++.|...+|.-+.. ...
T Consensus 188 --~H~~~V~~v~fspd-g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~--D~~ 262 (611)
T 1nr0_A 188 --EHTKFVHSVRYNPD-GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA--DKT 262 (611)
T ss_dssp --CCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET--TSE
T ss_pred --cccCceEEEEECCC-CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC--CCe
Confidence 23345889999974 556677677788999887543 3333322 23445789999986555544432 456
Q ss_pred EEEEecC
Q psy5792 303 IARAGLD 309 (377)
Q Consensus 303 I~r~~ld 309 (377)
|..-++.
T Consensus 263 v~lWd~~ 269 (611)
T 1nr0_A 263 IKIWNVA 269 (611)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 6666665
No 262
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.17 E-value=1.9 Score=39.71 Aligned_cols=196 Identities=9% Similarity=0.064 Sum_probs=107.5
Q ss_pred CCccccccCCCCeEEEEeC-CCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEE-CCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 17 AVASTLKPQSGPFVYGVKT-LSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFY-KGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~-~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
++..+++.+++..|..+-. ..+.|...|+... ..++ .......+|++. ++.+..+- ..+.+.+++ .+|...
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~---~~~~~V~~v~fspdg~~l~s~-s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI---ETRGEVKDLHFSTDGKVVAYI-TGSSLEVISTVTGSCI 210 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE---ECSSCCCEEEECTTSSEEEEE-CSSCEEEEETTTCCEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe---CCCCceEEEEEccCCceEEec-cceeEEEEEeccCcce
Confidence 5678899998888877655 3577888898776 4444 334457888983 33333332 345677777 666553
Q ss_pred EEEecC--CC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCC---eEEEE
Q psy5792 92 TVLRNN--AG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGY---DIMGI 165 (377)
Q Consensus 92 ~~~~~~--~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~---~I~~~ 165 (377)
...... .. +..+++ +++.+ .++.+..+.+ .++..
T Consensus 211 ~~~~~~~~~~~v~~v~f-spdg~---------------------------------------~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINF-IADDT---------------------------------------VLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EEECCCCTTEEEEEEEE-EETTE---------------------------------------EEEEEEESSSCCEEEEEE
T ss_pred eeeecCCCCCCEEEEEE-cCCCC---------------------------------------EEEEEecCCcceeEEeec
Confidence 322211 11 334433 33322 2222221110 13334
Q ss_pred EcCCCCceeeEEEEec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc-EEEEeccccCCCCCCCCcceEEEe
Q psy5792 166 KYNKNESKVTQVLGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR-ENIIEYVETGDPTPVDQFTDIAVD 243 (377)
Q Consensus 166 ~l~~~~~~~~~~~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~-~~i~~~~~~~~~~~~~~p~~iavD 243 (377)
++........ ....+ .....+.+++|.+.+..|.... ..+.|...++..... ..+.. .....+.++++.
T Consensus 251 ~~~~~~~~~~-~~~~~~~~~~~V~~~~~Spdg~~lasgs-~D~~V~iwd~~~~~~~~~~~~-------gH~~~V~~v~fS 321 (365)
T 4h5i_A 251 SIKSGNTSVL-RSKQVTNRFKGITSMDVDMKGELAVLAS-NDNSIALVKLKDLSMSKIFKQ-------AHSFAITEVTIS 321 (365)
T ss_dssp EEETTEEEEE-EEEEEESSCSCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEETT-------SSSSCEEEEEEC
T ss_pred ccccceecce-eeeeecCCCCCeEeEEECCCCCceEEEc-CCCEEEEEECCCCcEEEEecC-------cccCCEEEEEEC
Confidence 4332211000 11111 2234578999999666665554 567888888864222 22222 223458899999
Q ss_pred ccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 244 WIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 244 ~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
+. +.+..+-...++|.+.++..
T Consensus 322 pd-g~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 322 PD-STYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TT-SCEEEEEETTSEEEEEECCT
T ss_pred CC-CCEEEEEeCCCeEEEEEcCC
Confidence 75 55556777778888888754
No 263
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.05 E-value=2.3 Score=39.81 Aligned_cols=206 Identities=11% Similarity=0.025 Sum_probs=108.4
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEc----CCc-EEEEEeC--------C--CCCceEEEEEE---CCeEEEEcCC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNI----EVK-VAKVVSM--------P--DAAQVVAAVFY---KGRIIYSDAN 77 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~----dG~-~~~i~~~--------~--~~~~p~~lav~---~~~ly~td~~ 77 (377)
..+.+++..+.+..| .+-+..+.|...++ .|. .+..... + .......++.. ++.++++-..
T Consensus 112 ~~v~~~~~~~~~~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 112 STVTQITMIPNFDAF-AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCEEEEEEeCCCCEE-EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 357788888755544 44455677887776 454 3322100 0 22233344432 3555555566
Q ss_pred CCceEEEc-CCCCceEEEec--CCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEE
Q psy5792 78 DGNIRSIN-LDGSNSTVLRN--NAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFIL 153 (377)
Q Consensus 78 ~~~I~~~~-~~g~~~~~~~~--~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~ 153 (377)
++.|...+ .+++....+.. ... +..+++ +++. .++
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~-s~~~----------------------------------------~~l 229 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICI-DEEC----------------------------------------CVL 229 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEE-CTTS----------------------------------------CEE
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEE-CCCC----------------------------------------CEE
Confidence 77888888 56666555543 112 444443 2221 133
Q ss_pred EEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECC---CCEEEEEEcCCCcEEEEEcCCCC-cEEEEeccccC
Q psy5792 154 FSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAA---EDYIYWVDIDHGTISRTHRDGTG-RENIIEYVETG 229 (377)
Q Consensus 154 ~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~---~~~ly~sd~~~~~I~~~~~~G~~-~~~i~~~~~~~ 229 (377)
++....|.|+..++..... ...+.+.....+..+++.+. ++.+.++-...+.|...++.... ...+.......
T Consensus 230 ~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 306 (437)
T 3gre_A 230 ILGTTRGIIDIWDIRFNVL---IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQP 306 (437)
T ss_dssp EEEETTSCEEEEETTTTEE---EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCC
T ss_pred EEEcCCCeEEEEEcCCccE---EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCC
Confidence 3333334688888765422 11112233334667755542 34555666566788888886433 22222100000
Q ss_pred -----CC-------------CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCe
Q psy5792 230 -----DP-------------TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQY 268 (377)
Q Consensus 230 -----~~-------------~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~ 268 (377)
.+ .....+..++++ .+.++++-...++|.+-++....
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 307 SMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGG
T ss_pred ccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCcc
Confidence 00 011226678888 55677777777899999987654
No 264
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.79 E-value=2.2 Score=38.27 Aligned_cols=182 Identities=9% Similarity=-0.008 Sum_probs=101.3
Q ss_pred CeEEEEEcCCCC-ceeeEEEEecCCCCceEEEEE------ECCCCEEEEEEcCCCcEEEEEcCCCC-cEEEEeccccCCC
Q psy5792 160 YDIMGIKYNKNE-SKVTQVLGPLSKVSLAAKVDF------HAAEDYIYWVDIDHGTISRTHRDGTG-RENIIEYVETGDP 231 (377)
Q Consensus 160 ~~I~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~------d~~~~~ly~sd~~~~~I~~~~~~G~~-~~~i~~~~~~~~~ 231 (377)
|.|+..++.... . ...+ ......+..+++ .+.+..|+.+ ...+.|...++.... ..........
T Consensus 90 g~i~iwd~~~~~~~--~~~~--~~~~~~v~~~~~~~~~~~s~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~--- 161 (357)
T 3i2n_A 90 GNLHIWNLEAPEMP--VYSV--KGHKEIINAIDGIGGLGIGEGAPEIVTG-SRDGTVKVWDPRQKDDPVANMEPVQG--- 161 (357)
T ss_dssp SCEEEECTTSCSSC--SEEE--CCCSSCEEEEEEESGGGCC-CCCEEEEE-ETTSCEEEECTTSCSSCSEEECCCTT---
T ss_pred CeEEEEeCCCCCcc--EEEE--EecccceEEEeeccccccCCCccEEEEE-eCCCeEEEEeCCCCCCcceeccccCC---
Confidence 458888876554 2 1111 122334666754 3434455444 457788888886543 2222220000
Q ss_pred CCCCCcceEEE----eccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcC---CCCeEEEEecCCCCeEE
Q psy5792 232 TPVDQFTDIAV----DWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDP---ESGYLFWSESGKIPLIA 304 (377)
Q Consensus 232 ~~~~~p~~iav----D~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp---~~g~lywtd~g~~~~I~ 304 (377)
........+++ .+ .++++++-...+.|...++.......... .......++++| ...+|+.+.. ...|.
T Consensus 162 ~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~--dg~i~ 237 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETN-IKNGVCSLEFDRKDISMNKLVATSL--EGKFH 237 (357)
T ss_dssp SCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEESCSSSSCCEEEEEES--TTEEE
T ss_pred CCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecC-CCCceEEEEcCCCCCCCCEEEEECC--CCeEE
Confidence 01124556663 33 45565666666899999998876644433 345679999998 6666666653 45666
Q ss_pred EEecCCC-CeEEE----EecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccC
Q psy5792 305 RAGLDGK-KQTIL----AQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSG 354 (377)
Q Consensus 305 r~~ldG~-~~~~l----~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G 354 (377)
..++... ....+ ....-.....+++.+.+..++++-. ..+.|...++..
T Consensus 238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 291 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG-GAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEEEEC
T ss_pred EEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe-CCCcEEEeecCC
Confidence 6655422 11111 1122356778888865554677766 677777777653
No 265
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.68 E-value=3 Score=39.34 Aligned_cols=277 Identities=7% Similarity=-0.035 Sum_probs=143.9
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEE---CCeEEEEcCCCCceEEEc-CCCCc
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFY---KGRIIYSDANDGNIRSIN-LDGSN 90 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~---~~~ly~td~~~~~I~~~~-~~g~~ 90 (377)
.+.+++..+.+ +.++-+..+.|...|++.. ..++. ........+++. ++...++-..++.|...+ .++..
T Consensus 164 ~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 239 (464)
T 3v7d_B 164 GVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFE--GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS 239 (464)
T ss_dssp CEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCC
T ss_pred CEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEEEC--CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcc
Confidence 55666665543 4556666788998898766 44442 345556777774 446666666677888777 44433
Q ss_pred eEEEecCCCceeEEeeecCCCCcccCCCcCC--CCCCceeccccCCCccccCCcCCCcCCC-cEEEEEeCCCCeEEEEEc
Q psy5792 91 STVLRNNAGISDFILFSVNSGYDIMGIKYNK--NESKVQQVLGPLSKVSLAAKVDFHAGIS-DFILFSVNSGYDIMGIKY 167 (377)
Q Consensus 91 ~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~--~~g~Cs~~C~~~~~~~~~~G~~~C~~~~-~~l~~s~~~~~~I~~~~l 167 (377)
......... .......+... ..|.. ......- .|..++ ..++.+. ..+.|+..++
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~v---------------~~~~~~~~~l~~~~-~d~~i~vwd~ 297 (464)
T 3v7d_B 240 VPDHGEEHD-YPLVFHTPEEN-----PYFVGVLRGHMASV---------------RTVSGHGNIVVSGS-YDNTLIVWDV 297 (464)
T ss_dssp C------CC-SSEEESCGGGC-----TTEEEEECCCSSCE---------------EEEEEETTEEEEEE-TTSCEEEEET
T ss_pred cccccccCC-cceEeeccCCC-----eEEEEEccCccceE---------------EEEcCCCCEEEEEe-CCCeEEEEEC
Confidence 222111100 00000001000 00000 0000000 111111 2343333 3346888888
Q ss_pred CCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC
Q psy5792 168 NKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA 246 (377)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~ 246 (377)
..... +..+. ....+..+++++.+..|+... ..+.|...++.......... .....+..++++
T Consensus 298 ~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~--- 361 (464)
T 3v7d_B 298 AQMKC-----LYILSGHTDRIYSTIYDHERKRCISAS-MDTTIRIWDLENGELMYTLQ-------GHTALVGLLRLS--- 361 (464)
T ss_dssp TTTEE-----EEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEEC---
T ss_pred CCCcE-----EEEecCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCcEEEEEe-------CCCCcEEEEEEc---
Confidence 65422 22222 345588999999777766555 56889989986433222232 233346677776
Q ss_pred CeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeE-EEEecCCCCce
Q psy5792 247 QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQT-ILAQEIIMPIK 325 (377)
Q Consensus 247 ~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~-~l~~~~~~~P~ 325 (377)
+...++-...+.|.+.++....+..... .......+++.+.+..|.... ...|...++...... .+.........
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---dg~i~iwd~~~g~~~~~~~~~~~~~v~ 437 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS---ENQFNIYNLRSGKLVHANILKDADQIW 437 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE---TTEEEEEETTTCCEEESCTTTTCSEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec---CCeEEEEECCCCcEEehhhccCCCcEE
Confidence 3455666667889999998765443333 233456678887555555544 357777777543321 11112233455
Q ss_pred EEEEeCCCCEEEEEEe
Q psy5792 326 DITLDRKNKRVYWCYS 341 (377)
Q Consensus 326 glalD~~~~~LYw~d~ 341 (377)
.++.+ ++++..+-.
T Consensus 438 ~v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 438 SVNFK--GKTLVAAVE 451 (464)
T ss_dssp EEEEE--TTEEEEEEE
T ss_pred EEEec--CCEEEEEEE
Confidence 66665 566666544
No 266
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.48 E-value=4.6 Score=40.67 Aligned_cols=189 Identities=13% Similarity=0.001 Sum_probs=105.5
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++++....+.|+..++..... ..........+.++++.+.+..|.-. ...+.|...+..+.....+... ..
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~-s~D~~i~iwd~~~~~~~~~~~~----~~ 514 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVS----TRRFVGHTKDVLSVAFSLDNRQIVSA-SRDRTIKLWNTLGECKYTISEG----GE 514 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSSCEEEE-ETTSCEEEECTTSCEEEEECSS----TT
T ss_pred EEEEEeCCCcEEEEECCCCcc----eeEEeCCCCCEEEEEEeCCCCEEEEE-eCCCEEEEEECCCCcceeeccC----CC
Confidence 344444445688888765522 11111234457899999866665544 4567888887765433333220 00
Q ss_pred CCCCCcceEEEeccC-CeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 232 TPVDQFTDIAVDWIA-QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 232 ~~~~~p~~iavD~~~-~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
.....+.++++.+.. +.+..+-...++|.+.++........+.........++++|...+|.-... ...|...++..
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~--Dg~i~iwd~~~ 592 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK--DGVVLLWDLAE 592 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TSBCEEEETTT
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC--CCeEEEEECCC
Confidence 112236778887654 246667666788999999876554444444566789999996555554442 35666666643
Q ss_pred CCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 311 KKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 311 ~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
......... -.....+++.+....|.-+. .+.|...++..+
T Consensus 593 ~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~---~~~i~iwd~~~~ 633 (694)
T 3dm0_A 593 GKKLYSLEA-NSVIHALCFSPNRYWLCAAT---EHGIKIWDLESK 633 (694)
T ss_dssp TEEEECCBC-SSCEEEEEECSSSSEEEEEE---TTEEEEEETTTT
T ss_pred CceEEEecC-CCcEEEEEEcCCCcEEEEEc---CCCEEEEECCCC
Confidence 322111111 23456777765443333322 345666666643
No 267
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.24 E-value=3.5 Score=38.38 Aligned_cols=170 Identities=11% Similarity=0.045 Sum_probs=97.2
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCC-CCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEE
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDG-TGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVA 262 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G-~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~ 262 (377)
...+..+++.+.+..|.-+ ..+.|...+++. .....++..........-..+..+++.+.+.+++.+-...+.|...
T Consensus 177 ~~~v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CcceEEEEEcCCCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 3447788998865555544 578888888872 2211111100000001223478899997654666776677889999
Q ss_pred EcCCCeE----EEEeeCCCC------------CceeEEEcCCCCeEEEEecCCCCeEEEEecC--CCCeEEEEecC-CCC
Q psy5792 263 RLTGQYR----YVLISGGVD------------QPSALAVDPESGYLFWSESGKIPLIARAGLD--GKKQTILAQEI-IMP 323 (377)
Q Consensus 263 ~~~g~~~----~~l~~~~~~------------~P~~iavdp~~g~lywtd~g~~~~I~r~~ld--G~~~~~l~~~~-~~~ 323 (377)
++..... ...+..... ....++++|...+|.... . ..|...++. +.....+.... +..
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD--Y-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE--S-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee--C-CeEEEEeCCCCccccceeeccccccc
Confidence 9876542 223332222 578999999666666554 2 567766665 33333332211 000
Q ss_pred -------------ceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEEE
Q psy5792 324 -------------IKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQL 360 (377)
Q Consensus 324 -------------P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~~ 360 (377)
...+++.+.+..| .+-. ..+.|...++..+...++
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s-~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVV-MTGS-YNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEE-EEEC-STTEEEEEETTTCCEEEE
T ss_pred cccccccccccccceEEEECCCCCEE-EEec-cCCEEEEEEcCCCcceee
Confidence 2237887666666 5555 678888888886654433
No 268
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.97 E-value=0.36 Score=41.98 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=74.0
Q ss_pred CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC-------CcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCC
Q psy5792 184 VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT-------GRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKE 256 (377)
Q Consensus 184 ~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~-------~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~ 256 (377)
..+...+++++ ++.||-. .++.+++.+.... ....|-. .+...-..+.+| .+++||.. ..
T Consensus 40 w~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~-------~Gw~~F~a~~fD-~~G~LYav--~d 106 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN-------GGWNQFQFLFFD-PNGYLYAV--SK 106 (236)
T ss_dssp CTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC-------SCGGGCSEEEEC-TTSCEEEE--ET
T ss_pred cccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecc-------cccccceEEEEC-CCCCEEEe--CC
Confidence 34566899999 8899988 5778999887421 1122322 233346789999 58999999 33
Q ss_pred CEEEEEEc--CCCe-----EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 257 NVIEVARL--TGQY-----RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 257 ~~I~~~~~--~g~~-----~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
++|++.+. ++.. -.++...+...-..|+.+| .|.||-.. . .+++|-
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d--g~lyr~ 159 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G--QQFYKA 159 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T--TEEEEE
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C--CcEEec
Confidence 89999887 4432 2345555566779999998 89999988 3 457664
No 269
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.57 E-value=8.4 Score=40.44 Aligned_cols=204 Identities=8% Similarity=0.048 Sum_probs=116.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEE
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTV 93 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~ 93 (377)
..+.+++.++.+..|. +-+..+.|...+..+. ..... ........|++..+....+-..++.|...+ .+++....
T Consensus 18 ~~V~~lafspdg~~lA-sgs~Dg~I~lw~~~~~~~~~~~--~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLA-IATVTGEVHIYGQQQVEVVIKL--EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp SCEEEEEEETTTTEEE-EEETTSEEEEECSTTCEEEEEC--SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEE
T ss_pred CCcEEEEECCCCCEEE-EEeCCCEEEEEeCCCcEEEEEc--CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEE
Confidence 4678999999876664 4445688999888777 43332 334456788885566444444567888888 56665555
Q ss_pred EecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCce
Q psy5792 94 LRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESK 173 (377)
Q Consensus 94 ~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~ 173 (377)
+.....+..+++ +++. .+++.+. ..|.|+..+++....
T Consensus 95 ~~~~~~V~~v~~-sp~g---------------------------------------~~l~sgs-~dg~V~lwd~~~~~~- 132 (902)
T 2oaj_A 95 VFVPGKITSIDT-DASL---------------------------------------DWMLIGL-QNGSMIVYDIDRDQL- 132 (902)
T ss_dssp EECSSCEEEEEC-CTTC---------------------------------------SEEEEEE-TTSCEEEEETTTTEE-
T ss_pred EcCCCCEEEEEE-CCCC---------------------------------------CEEEEEc-CCCcEEEEECCCCcc-
Confidence 432211333332 2222 1344443 334688888876532
Q ss_pred eeEEEE---------ecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC-CC----------CC
Q psy5792 174 VTQVLG---------PLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG-DP----------TP 233 (377)
Q Consensus 174 ~~~~~~---------~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~-~~----------~~ 233 (377)
..... +-.....+.++++++.+..+..+-...+.| ..++........+...... .+ ..
T Consensus 133 -~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 133 -SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp -EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred -ccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccccc
Confidence 10000 011234577899998655556666667888 8888753322222200000 00 00
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCC
Q psy5792 234 VDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQ 267 (377)
Q Consensus 234 ~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~ 267 (377)
...+.++++.+. +..+.+-...++|..-++...
T Consensus 211 ~~~V~~v~fspd-g~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 211 TPKVIQSLYHPN-SLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp CCCEEEEEECTT-SSEEEEEETTCCEEEEETTTC
T ss_pred CCCeEEEEEcCC-CCEEEEEECCCeEEEEECCCC
Confidence 134778889875 556667666778888888543
No 270
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.50 E-value=3.4 Score=40.55 Aligned_cols=188 Identities=7% Similarity=-0.021 Sum_probs=89.4
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCC-cEEEEeccccCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTG-RENIIEYVETGD 230 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~-~~~i~~~~~~~~ 230 (377)
++++.+..+.|+-.++..... ...+..-.....+..+++.+.... +.+-...+.|...++.... ...+..
T Consensus 325 ~laS~S~D~tvklWD~~~~~~--~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~g------ 395 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIAT--TKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVS------ 395 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHH--HCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEE------
T ss_pred EEEEeccCCeEEEEECCCCCc--ccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccccceeeec------
Confidence 555555555688877754321 011111011123457888885554 5554456678777775433 233333
Q ss_pred CCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeC----CCCCceeEEEcCCCCeEEEEecCCCCeEEEE
Q psy5792 231 PTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISG----GVDQPSALAVDPESGYLFWSESGKIPLIARA 306 (377)
Q Consensus 231 ~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~lywtd~g~~~~I~r~ 306 (377)
..+.+.+|++.+. +.++.+-...++|...++.+......-.. .......++.+|..+ ++-.+. ...++..
T Consensus 396 --H~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~~~~~~--~~~~~~~ 469 (524)
T 2j04_B 396 --RETTITAIGVSRL-HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDD-KYRIDS--SYEVYPL 469 (524)
T ss_dssp --CSSCEEEEECCSS-CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSC-EEEECC--CCCCCC-
T ss_pred --CCCceEEEEeCCC-CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCC-eEEccC--Cceeccc
Confidence 3456888999874 44556666667888777654311100000 000124566666433 333321 1222222
Q ss_pred ecCCCCeEEEEecCCCCceEEEEeCCC--CEEEEEEeCCCCeEEEEEccCCc
Q psy5792 307 GLDGKKQTILAQEIIMPIKDITLDRKN--KRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 307 ~ldG~~~~~l~~~~~~~P~glalD~~~--~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
...|.....+... -.....++..+.. +.++-+-. ..+.|.--+++|..
T Consensus 470 ~~~g~~~~~l~gh-~~~V~~Vafsp~~~~~~~lAsg~-~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 470 TVNDVSKAKIDAH-GINITCTKWNETSAGGKCYAFSN-SAGLLTLEYLSLEH 519 (524)
T ss_dssp ------------C-CCSCCCEEECCSTTTTTEEEEEC-TTSEEEEEECSCC-
T ss_pred ccCCcceeeecCC-CceEEEEECCCCCCccHHHHhhc-cCceEEEEEccccc
Confidence 2223323333222 2455678887653 23444555 56777777777654
No 271
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.43 E-value=4.9 Score=37.33 Aligned_cols=145 Identities=9% Similarity=0.067 Sum_probs=81.2
Q ss_pred CCCeEEEEEcCCCCceeeEEEE-----ec-CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc----EEEEeccc
Q psy5792 158 SGYDIMGIKYNKNESKVTQVLG-----PL-SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR----ENIIEYVE 227 (377)
Q Consensus 158 ~~~~I~~~~l~~~~~~~~~~~~-----~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~----~~i~~~~~ 227 (377)
..+.|+..++..... ...+. .+ .....+..+++++.+..++.+-...+.|...++..... .....
T Consensus 196 ~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--- 270 (447)
T 3dw8_B 196 DDLRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE--- 270 (447)
T ss_dssp CSSEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC---
T ss_pred CCCeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec---
Confidence 455688888763211 01111 01 22345889999987634444444678899898865432 23332
Q ss_pred cCCCCCCC------------CcceEEEeccCCeEEEEcCCCCEEEEEEcCC--CeEEEEeeCC-CC-------------C
Q psy5792 228 TGDPTPVD------------QFTDIAVDWIAQNIYWSDPKENVIEVARLTG--QYRYVLISGG-VD-------------Q 279 (377)
Q Consensus 228 ~~~~~~~~------------~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g--~~~~~l~~~~-~~-------------~ 279 (377)
.... .+..+++.+.+..|. +-.. +.|.+.++.. .....+.... .. .
T Consensus 271 ----~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 271 ----EPEDPSNRSFFSEIISSISDVKFSHSGRYMM-TRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp ----CC-----CCHHHHHTTCEEEEEECTTSSEEE-EEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred ----cCCCccccccccccCceEEEEEECCCCCEEE-EeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 1221 578899998555555 4444 8999999864 3222222110 00 0
Q ss_pred ceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEE
Q psy5792 280 PSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTI 315 (377)
Q Consensus 280 P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~ 315 (377)
...++++|...+|.-.. ..+.|...++.......
T Consensus 345 ~~~~~~s~~~~~l~s~s--~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGS--YNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp CCCEEECTTSSEEEEEC--STTEEEEEETTTCCEEE
T ss_pred ceEEEECCCCCEEEEec--cCCEEEEEEcCCCccee
Confidence 22389998766664443 35778777777654433
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.41 E-value=6.7 Score=38.84 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=43.6
Q ss_pred CCeEEEEeCCCCcEEEEEc--CCcEEEEEeCCCC----------CceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEE
Q psy5792 27 GPFVYGVKTLSHSLHYVNI--EVKVAKVVSMPDA----------AQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTV 93 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~--dG~~~~i~~~~~~----------~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~ 93 (377)
+++||+.....+.|.-+|. +|+...-...... ....++++.+++||+... .+.|..+| .+|+.+-.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-NGHLLALDAKTGKINWE 140 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-CCEEEEEECCCCCEEEE
Confidence 5689998764678999998 6663222211110 012356789999999964 46799999 78877533
No 273
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.40 E-value=5.1 Score=37.38 Aligned_cols=139 Identities=6% Similarity=-0.054 Sum_probs=79.5
Q ss_pred CeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEc--CCCcEEEEEcCCCCcEEEEeccccCCCCCCCCc
Q psy5792 160 YDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDI--DHGTISRTHRDGTGRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~--~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p 237 (377)
+.++..+....................+.++++.+.+..++.+-. ..+.|...++.......... .-..+
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--------~~~~v 323 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AHSQV 323 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--------CSSCE
T ss_pred ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--------cccce
Confidence 347766665432200011111223345778888877776665532 35678888876433333332 23457
Q ss_pred ceEEEeccCCeEEEEcC-CCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 238 TDIAVDWIAQNIYWSDP-KENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 238 ~~iavD~~~~~lYwtd~-~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
..+++.+..+.|+.+.. ..++|.+.++........+........++++.|...+|.-+.. ...|..-++
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~--D~tvriWdv 393 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA--DETLRLWRC 393 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET--TTEEEEECC
T ss_pred eeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec--CCeEEEEEC
Confidence 78888877777776643 4678999998755443334444566789999986555544432 244444443
No 274
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.95 E-value=5.4 Score=36.48 Aligned_cols=135 Identities=10% Similarity=0.091 Sum_probs=75.8
Q ss_pred CCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcC-CCeEEEEee
Q psy5792 196 EDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLT-GQYRYVLIS 274 (377)
Q Consensus 196 ~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~-g~~~~~l~~ 274 (377)
++.||+.. ..+.++.++..... .+.. .....+.+++++ .++||++.. .+.|...++. |+..-..-.
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~--~~w~-------~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQ--IMWK-------RELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCC--EEEE-------ECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEECT
T ss_pred CCEEEEEe-cCcEEEEEECCCCc--EEee-------ccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeecc
Confidence 68898876 45788888885322 2222 234456677887 789999875 3578888875 443222210
Q ss_pred CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC-CCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEE
Q psy5792 275 GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMD 351 (377)
Q Consensus 275 ~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld-G~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~ 351 (377)
.........++. ++.||+.+. ...|...+.. |+.....-...-......++ .+++||+... .+.|+.++
T Consensus 306 ~~~~~~~~~~~~--~~~l~v~~~--~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~--~G~l~~~~ 375 (376)
T 3q7m_A 306 LLHRLLTSPVLY--NGNLVVGDS--EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAK--DGTVYSIT 375 (376)
T ss_dssp TTTSCCCCCEEE--TTEEEEECT--TSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBT--TSCEEEEE
T ss_pred cCCCcccCCEEE--CCEEEEEeC--CCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeC--CCEEEEEe
Confidence 111223344453 688888874 4678888754 44332222211111122333 3688988765 45666654
No 275
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.82 E-value=1 Score=39.04 Aligned_cols=100 Identities=17% Similarity=0.114 Sum_probs=66.2
Q ss_pred CCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCC-------CeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEE
Q psy5792 233 PVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTG-------QYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIAR 305 (377)
Q Consensus 233 ~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g-------~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r 305 (377)
+......||+++ ++.||-. ..+.+++.++.. ...+.|-..+...-.++.+|| +|.||... ..+|+|
T Consensus 39 gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~---dG~iyr 111 (236)
T 1tl2_A 39 GWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVS---KDKLYK 111 (236)
T ss_dssp SCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEE---TTEEEE
T ss_pred ccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeC---CCEEEE
Confidence 466788999998 8999999 667899988743 123344444555578999997 89999993 379999
Q ss_pred Eec--CCCC-----eEEEEecCCCCceEEEEeCCCCEEEEEE
Q psy5792 306 AGL--DGKK-----QTILAQEIIMPIKDITLDRKNKRVYWCY 340 (377)
Q Consensus 306 ~~l--dG~~-----~~~l~~~~~~~P~glalD~~~~~LYw~d 340 (377)
.+- ++.. .+.+-+..-..-.-|..|+ ++.||-+.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~ 152 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH 152 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe
Confidence 875 3332 2344443222335566663 46666554
No 276
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.74 E-value=5.8 Score=36.28 Aligned_cols=264 Identities=12% Similarity=0.058 Sum_probs=129.1
Q ss_pred CCeEEEEeCCCCcEEEEEcC-Cc-EEEEEeCC--------CCCceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEEe
Q psy5792 27 GPFVYGVKTLSHSLHYVNIE-VK-VAKVVSMP--------DAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVLR 95 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~d-G~-~~~i~~~~--------~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~~ 95 (377)
+++||+... .+.|..+|.+ |+ +-+.-... .......+++.++.||+... .+.|..++ .+|+..-...
T Consensus 53 ~~~v~~~~~-~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADR-AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEECT-TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-TSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcC-CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEe
Confidence 568888754 5689999985 66 33332111 11223446679999999864 46799999 6787643332
Q ss_pred cCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceee
Q psy5792 96 NNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVT 175 (377)
Q Consensus 96 ~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~ 175 (377)
....+....+.. +..+++... .+.|..++......
T Consensus 131 ~~~~~~~~p~~~-----------------------------------------~~~v~v~~~-~g~l~~~d~~tG~~--- 165 (376)
T 3q7m_A 131 VAGEALSRPVVS-----------------------------------------DGLVLIHTS-NGQLQALNEADGAV--- 165 (376)
T ss_dssp CSSCCCSCCEEE-----------------------------------------TTEEEEECT-TSEEEEEETTTCCE---
T ss_pred CCCceEcCCEEE-----------------------------------------CCEEEEEcC-CCeEEEEECCCCcE---
Confidence 111100000000 112333322 23466666543322
Q ss_pred EEEEecCCC----CceEEEEEECCCCEEEEEEcCCCcEEEEEcC-CCCcEEEEeccccCCC---CCCC-CcceEEEeccC
Q psy5792 176 QVLGPLSKV----SLAAKVDFHAAEDYIYWVDIDHGTISRTHRD-GTGRENIIEYVETGDP---TPVD-QFTDIAVDWIA 246 (377)
Q Consensus 176 ~~~~~~~~~----~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~-G~~~~~i~~~~~~~~~---~~~~-~p~~iavD~~~ 246 (377)
......... .......++ ++.||+.. ..+.++.++.. |...-..... ..... ..+. .....+++ .
T Consensus 166 ~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~~--~ 239 (376)
T 3q7m_A 166 KWTVNLDMPSLSLRGESAPTTA--FGAAVVGG-DNGRVSAVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVVV--N 239 (376)
T ss_dssp EEEEECCC-----CCCCCCEEE--TTEEEECC-TTTEEEEEETTTCCEEEEEECC-C-----------CCCCCCEEE--T
T ss_pred EEEEeCCCCceeecCCCCcEEE--CCEEEEEc-CCCEEEEEECCCCcEEEEEecc-cCCCCcccccccccCCCcEEE--C
Confidence 011111100 000111222 56777653 35677777764 3222111110 00000 0000 00112333 6
Q ss_pred CeEEEEcCCCCEEEEEEcC-CCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC-CCCeEEEEecCCCCc
Q psy5792 247 QNIYWSDPKENVIEVARLT-GQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD-GKKQTILAQEIIMPI 324 (377)
Q Consensus 247 ~~lYwtd~~~~~I~~~~~~-g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld-G~~~~~l~~~~~~~P 324 (377)
+.||+... .+.+...++. |+..-.. ....+.+++++ ++.||++.. ...|...+.. |+.....-...-...
T Consensus 240 ~~v~~~~~-~g~l~~~d~~tG~~~w~~---~~~~~~~~~~~--~~~l~~~~~--~g~l~~~d~~tG~~~w~~~~~~~~~~ 311 (376)
T 3q7m_A 240 GVVFALAY-NGNLTALDLRSGQIMWKR---ELGSVNDFIVD--GNRIYLVDQ--NDRVMALTIDGGVTLWTQSDLLHRLL 311 (376)
T ss_dssp TEEEEECT-TSCEEEEETTTCCEEEEE---CCCCEEEEEEE--TTEEEEEET--TCCEEEEETTTCCEEEEECTTTTSCC
T ss_pred CEEEEEec-CcEEEEEECCCCcEEeec---cCCCCCCceEE--CCEEEEEcC--CCeEEEEECCCCcEEEeecccCCCcc
Confidence 88888754 4678888885 5433221 23446677775 789999985 4688888875 433222210111122
Q ss_pred eEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 325 KDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 325 ~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
...++. +++||+.+. .+.|..++...+
T Consensus 312 ~~~~~~--~~~l~v~~~--~g~l~~~d~~tG 338 (376)
T 3q7m_A 312 TSPVLY--NGNLVVGDS--EGYLHWINVEDG 338 (376)
T ss_dssp CCCEEE--TTEEEEECT--TSEEEEEETTTC
T ss_pred cCCEEE--CCEEEEEeC--CCeEEEEECCCC
Confidence 334443 578888765 567888886544
No 277
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.73 E-value=5.7 Score=36.20 Aligned_cols=226 Identities=10% Similarity=0.109 Sum_probs=123.2
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-EEEEEeCCCCCceEEEEE--ECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-VAKVVSMPDAAQVVAAVF--YKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~~~i~~~~~~~~p~~lav--~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
..+.++++.+++..|... ..+.+...+++.. ...... ......+++ ..+.+.++-...+.|...| .+|+..
T Consensus 20 ~~V~~v~fs~dg~~la~g--~~~~~~iw~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILS--TLKSFEIYNVHPVAHIMSQE---MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV 94 (355)
T ss_dssp CCCCEEEECTTSSEEEEE--CSSEEEEEEETTEEEEEEEE---CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred CceEEEEECCCCCEEEEE--cCCEEEEEecCCcceeeeee---cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence 577889999987766433 3345666776655 222211 112223333 4556666666666788788 566555
Q ss_pred EEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCC-
Q psy5792 92 TVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKN- 170 (377)
Q Consensus 92 ~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~- 170 (377)
..+.....+.++.+ ++ ..++++.... |+..++...
T Consensus 95 ~~~~~~~~v~~v~~-~~-----------------------------------------~~~~~~~~~~--i~i~d~~~~~ 130 (355)
T 3vu4_A 95 SRIKVDAPVKDLFL-SR-----------------------------------------EFIVVSYGDV--ISVFKFGNPW 130 (355)
T ss_dssp EEEECSSCEEEEEE-CS-----------------------------------------SEEEEEETTE--EEEEESSTTC
T ss_pred EEEECCCceEEEEE-cC-----------------------------------------CEEEEEEcCE--EEEEECCCCc
Confidence 54442222334433 11 1244444443 887777654
Q ss_pred CceeeEEEEecCCCCceEEEEEECCCCEEEEE-EcCCCcEEEEEcCCCC---------------c-EEEEeccccCCCCC
Q psy5792 171 ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWV-DIDHGTISRTHRDGTG---------------R-ENIIEYVETGDPTP 233 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~s-d~~~~~I~~~~~~G~~---------------~-~~i~~~~~~~~~~~ 233 (377)
.. ... +.. .....++.+ +.+.++ ....+.|...++.... . ..... ..
T Consensus 131 ~~--~~~---~~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~h 194 (355)
T 3vu4_A 131 KR--ITD---DIR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-------AH 194 (355)
T ss_dssp CB--SSC---CEE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC-------CC
T ss_pred ee--eEE---ecc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-------cc
Confidence 21 000 011 111223333 555555 3456778877776432 0 12222 23
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCE-EEEEEcCCC-eEEEEeeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 234 VDQFTDIAVDWIAQNIYWSDPKENV-IEVARLTGQ-YRYVLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 234 ~~~p~~iavD~~~~~lYwtd~~~~~-I~~~~~~g~-~~~~l~~~-~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
-..+.++++.+ .+.+..+-...++ |.+-++... ...++... ......+++++|...+|.-+.. ...|...++.
T Consensus 195 ~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~--d~~v~iw~~~ 270 (355)
T 3vu4_A 195 TNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD--KWTLHVFEIF 270 (355)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET--TCEEEEEESS
T ss_pred CCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC--CCEEEEEEcc
Confidence 44588999997 4556667666777 999999754 44444322 3456789999996666655543 3566666654
No 278
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=92.66 E-value=1.8 Score=43.18 Aligned_cols=114 Identities=13% Similarity=0.156 Sum_probs=75.3
Q ss_pred CCCceEEEEEECCCCEEEEEEcC---------------------CCcEEEEEcCCCC-------cEEEEeccccC-----
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDID---------------------HGTISRTHRDGTG-------RENIIEYVETG----- 229 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~---------------------~~~I~~~~~~G~~-------~~~i~~~~~~~----- 229 (377)
.+.++.++.+++.++.||++-.. .|.|+++..++.. .+.++......
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 45689999999999999998542 2579999876432 12222111100
Q ss_pred ---------CCCCCCCcceEEEeccCCeEEEE-cCC-----------CCEEEEEEcC-CCeEEEEeeCCCCCceeEEEcC
Q psy5792 230 ---------DPTPVDQFTDIAVDWIAQNIYWS-DPK-----------ENVIEVARLT-GQYRYVLISGGVDQPSALAVDP 287 (377)
Q Consensus 230 ---------~~~~~~~p~~iavD~~~~~lYwt-d~~-----------~~~I~~~~~~-g~~~~~l~~~~~~~P~~iavdp 287 (377)
....+..|.+|++|+ .++||++ |.. ++.+...... |+.++.+..-......|+++.|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 113467899999997 5678776 432 3567777776 4444444333456788999999
Q ss_pred CCCeEEEEec
Q psy5792 288 ESGYLFWSES 297 (377)
Q Consensus 288 ~~g~lywtd~ 297 (377)
....||+.-.
T Consensus 541 Dg~tlfvniQ 550 (592)
T 3zwu_A 541 DQKTLFVGIQ 550 (592)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 8889998854
No 279
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.63 E-value=10 Score=38.83 Aligned_cols=185 Identities=9% Similarity=0.012 Sum_probs=100.7
Q ss_pred EEEEEeCCCC----eEEEEEcCCC-CceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCC----CcEEEEEcCCCCc--
Q psy5792 151 FILFSVNSGY----DIMGIKYNKN-ESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDH----GTISRTHRDGTGR-- 219 (377)
Q Consensus 151 ~l~~s~~~~~----~I~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~----~~I~~~~~~G~~~-- 219 (377)
.|.|+....| .|+.+++++. .. +...+ .. ...++++.+.++.||++.... .+|++.++++...
T Consensus 188 ~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~---~~--~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~ 261 (751)
T 2xe4_A 188 LVAFSVDMSGNEVYTIEFKRISDPSQT-IADKV---SG--TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSED 261 (751)
T ss_dssp EEEEEEESSSSSCEEEEEEETTCTTCC-CCCCE---EE--ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGC
T ss_pred EEEEEEeCCCCceEEEEEEECCCCCEe-CCccc---cC--ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhc
Confidence 4555543322 3888898876 42 00101 00 123456666677888886532 3799999976532
Q ss_pred EEEEeccccCCCCCCCCcceEEEeccCCeEEEEcC--CCCEEEEEEcCCC--eE--EEEeeCCCCCceeEEEc-CCCCeE
Q psy5792 220 ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDP--KENVIEVARLTGQ--YR--YVLISGGVDQPSALAVD-PESGYL 292 (377)
Q Consensus 220 ~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~--~~~~I~~~~~~g~--~~--~~l~~~~~~~P~~iavd-p~~g~l 292 (377)
+.+... ..-..-.++++.+.++.|+|+.. ....|++.++++. .. +.+... ...|. ..++ ...+.|
T Consensus 262 ~lv~~~------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~-~~~~~-~s~~~~~g~~l 333 (751)
T 2xe4_A 262 VCLYEE------HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR-EKGVR-YDVQMHGTSHL 333 (751)
T ss_dssp EEEEEC------CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC-CTTCC-EEEEEETTTEE
T ss_pred EEEEec------CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC-CCCce-EEEeeeeCCEE
Confidence 234330 11112335566666777887643 3457999999864 22 334332 22221 2233 236777
Q ss_pred EEEe-cC--CCCeEEEEecCC-CCeEE-EEecCCC-CceEEEEeCCCCEEEEEEeCCC--CeEEEEEc
Q psy5792 293 FWSE-SG--KIPLIARAGLDG-KKQTI-LAQEIIM-PIKDITLDRKNKRVYWCYSVGS--NVLESMDY 352 (377)
Q Consensus 293 ywtd-~g--~~~~I~r~~ldG-~~~~~-l~~~~~~-~P~glalD~~~~~LYw~d~~~~--~~i~~~~~ 352 (377)
||.. .. .+.+|+++++++ ...+. ++..... ...++++ .+++||++.. .. ..|..+++
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~-~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGR-RAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEE-ETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEE-eCCEEEEEEEec
Confidence 7654 32 357999999885 33333 4443211 2345555 4688888766 43 46777775
No 280
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=92.46 E-value=2.8 Score=41.87 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=72.2
Q ss_pred CCCCCcceEEEeccCCeEEEEcCC---------------------CCEEEEEEcCCCe------E-EEEe-e--------
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPK---------------------ENVIEVARLTGQY------R-YVLI-S-------- 274 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~---------------------~~~I~~~~~~g~~------~-~~l~-~-------- 274 (377)
..+.+|+++++++.++.+|++-.+ .+.|++..+++.. . ..++ .
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 456789999999999999998542 2579999876431 1 1121 1
Q ss_pred ------------CCCCCceeEEEcCCCCeEEEEecCC-----------CCeEEEEecCCCCeEEEEec-CCCCceEEEEe
Q psy5792 275 ------------GGVDQPSALAVDPESGYLFWSESGK-----------IPLIARAGLDGKKQTILAQE-IIMPIKDITLD 330 (377)
Q Consensus 275 ------------~~~~~P~~iavdp~~g~lywtd~g~-----------~~~I~r~~ldG~~~~~l~~~-~~~~P~glalD 330 (377)
..+..|-.|++|| .|.|++++-+. +..+..........+.++.. .-....|+++.
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fs 539 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred cccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeEC
Confidence 1267899999998 67788876542 23455555443333333332 12467899998
Q ss_pred CCCCEEEEEEe
Q psy5792 331 RKNKRVYWCYS 341 (377)
Q Consensus 331 ~~~~~LYw~d~ 341 (377)
+..+.||+.-.
T Consensus 540 pDg~tlfvniQ 550 (592)
T 3zwu_A 540 PDQKTLFVGIQ 550 (592)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 88889998766
No 281
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.00 E-value=7.5 Score=35.88 Aligned_cols=185 Identities=10% Similarity=-0.027 Sum_probs=104.9
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
+++....+.|+..++..... +..+. ....+.++++.+.+..|+-+. ..+.|...++..........
T Consensus 138 l~s~~~d~~i~iwd~~~~~~-----~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~v~iwd~~~~~~~~~~~------- 204 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKI-----VMILQGHEQDIYSLDYFPSGDKLVSGS-GDRTVRIWDLRTGQCSLTLS------- 204 (393)
T ss_dssp EEEEETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEE-------
T ss_pred EEEEcCCCeEEEEECCCCcE-----EEEEccCCCCEEEEEEcCCCCEEEEec-CCCcEEEEECCCCeeEEEEE-------
Confidence 33333334688888876522 22222 334578999998777665444 56888888887533222222
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEE-EEe------eCCCCCceeEEEcCCCCeEEEEecCCCCeEE
Q psy5792 232 TPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRY-VLI------SGGVDQPSALAVDPESGYLFWSESGKIPLIA 304 (377)
Q Consensus 232 ~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~-~l~------~~~~~~P~~iavdp~~g~lywtd~g~~~~I~ 304 (377)
.-..+..+++.+..++++.+-...+.|.+.++...... .+. ........+++++|...+|+-... ...|.
T Consensus 205 -~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--d~~v~ 281 (393)
T 1erj_A 205 -IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--DRSVK 281 (393)
T ss_dssp -CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET--TSEEE
T ss_pred -cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC--CCEEE
Confidence 22357788888766777777777788998888755432 221 122345689999986666655543 35666
Q ss_pred EEecCCCC-------------eEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCc
Q psy5792 305 RAGLDGKK-------------QTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGS 356 (377)
Q Consensus 305 r~~ldG~~-------------~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~ 356 (377)
..++.... ...+. ..-.....+++.+.+..|. +-. ..+.|...+...+.
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~-sgs-~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYIL-SGS-KDRGVLFWDKKSGN 343 (393)
T ss_dssp EEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEE-EEE-TTSEEEEEETTTCC
T ss_pred EEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEE-EEe-CCCeEEEEECCCCe
Confidence 55554211 11111 1123455677765444443 444 55667666665443
No 282
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.75 E-value=6.6 Score=34.71 Aligned_cols=180 Identities=11% Similarity=-0.009 Sum_probs=97.1
Q ss_pred CCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcc
Q psy5792 159 GYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFT 238 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~ 238 (377)
.+.|+......... ...............+.+.+..|.... ..+.+...+..+........ ......+.
T Consensus 107 d~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~s-~d~~~~~~d~~~~~~~~~~~------~~~~~~v~ 175 (340)
T 4aow_A 107 DGTLRLWDLTTGTT----TRRFVGHTKDVLSVAFSSDNRQIVSGS-RDKTIKLWNTLGVCKYTVQD------ESHSEWVS 175 (340)
T ss_dssp TSEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSSCEEEEE-TTSCEEEECTTSCEEEEECS------SSCSSCEE
T ss_pred cccceEEeecccce----eeeecCCCCceeEEEEeecCccceeec-CCCeEEEEEeCCCceEEEEe------ccccCccc
Confidence 34566666655422 222223334455566666555554443 45667666665433322221 01123356
Q ss_pred eEEEeccCC-eEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy5792 239 DIAVDWIAQ-NIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILA 317 (377)
Q Consensus 239 ~iavD~~~~-~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~ 317 (377)
.+++.+... .++.+-...+.|...++.................+++++|...+|+-+.. ...|...++.........
T Consensus 176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK--DGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TCEEEEEETTTTEEEEEE
T ss_pred ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC--CCeEEEEEeccCceeeee
Confidence 677765443 45566666678988898876654444444455789999996555555442 467777777654433333
Q ss_pred ecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 318 QEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 318 ~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.. -.....++..+ ++.+.. -. ..+.|...++++.
T Consensus 254 ~~-~~~v~~~~~~~-~~~~~~-~~-~d~~i~iwd~~~~ 287 (340)
T 4aow_A 254 DG-GDIINALCFSP-NRYWLC-AA-TGPSIKIWDLEGK 287 (340)
T ss_dssp EC-SSCEEEEEECS-SSSEEE-EE-ETTEEEEEETTTT
T ss_pred cC-CceEEeeecCC-CCceee-cc-CCCEEEEEECCCC
Confidence 32 23455666653 333333 33 3466766676654
No 283
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=91.61 E-value=7.1 Score=34.79 Aligned_cols=263 Identities=11% Similarity=0.022 Sum_probs=127.0
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCCc-E---EEEEeCCCCCceEEEEEE---CCeEEEEcCCCCceEEEc-CC
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK-V---AKVVSMPDAAQVVAAVFY---KGRIIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~-~---~~i~~~~~~~~p~~lav~---~~~ly~td~~~~~I~~~~-~~ 87 (377)
+.+.++++++.+.+| .+-+..+.|...|+... . .++. .+......+++. ++.+..+-..++.|...+ .+
T Consensus 14 ~~V~~v~~s~~g~~l-asgs~D~~v~lwd~~~~~~~~~~~l~--gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRL-ATCSSDRSVKIFDVRNGGQILIADLR--GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp CCEEEEEECGGGCEE-EEEETTTEEEEEEEETTEEEEEEEEE--CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred CeEEEeeEcCCCCEE-EEEeCCCeEEEEEecCCCcEEEEEEc--CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 356778888776555 44456778888887644 2 2332 445567788873 255666666677888888 44
Q ss_pred CCc--eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEE
Q psy5792 88 GSN--STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMG 164 (377)
Q Consensus 88 g~~--~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~ 164 (377)
|+. ...+..... +..+.+ +|+.. ..++++....+.|+.
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~-~p~~~--------------------------------------g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCW-APHDY--------------------------------------GLILACGSSDGAISL 131 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEE-CCTTT--------------------------------------CSCEEEECSSSCEEE
T ss_pred CcceEEEEccCCCCceEEEEE-CCCCC--------------------------------------CcEEEEEcCCCCEEE
Confidence 532 222222222 344433 22100 113333333345666
Q ss_pred EEcCCCCceeeEEEEecC-CCCceEEEEEECCC----------------CEEEEEEcCCCcEEEEEcCCCCc-EEEEecc
Q psy5792 165 IKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAE----------------DYIYWVDIDHGTISRTHRDGTGR-ENIIEYV 226 (377)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~----------------~~ly~sd~~~~~I~~~~~~G~~~-~~i~~~~ 226 (377)
.++..... ......+. .......+++.+.. +.++.+-...+.|...++..... +.+...
T Consensus 132 wd~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l- 208 (316)
T 3bg1_A 132 LTYTGEGQ--WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL- 208 (316)
T ss_dssp EEECSSSC--EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-
T ss_pred EecCCCCC--cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-
Confidence 66544321 00000011 11123334444321 23445544556666666653321 222210
Q ss_pred ccCCCCCCCCcceEEEeccC---CeEEEEcCCCCEEEEEEcCCC----eEEEEeeCCCCCceeEEEcCCCCeEEEEecCC
Q psy5792 227 ETGDPTPVDQFTDIAVDWIA---QNIYWSDPKENVIEVARLTGQ----YRYVLISGGVDQPSALAVDPESGYLFWSESGK 299 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~---~~lYwtd~~~~~I~~~~~~g~----~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~ 299 (377)
...-..+.++++.+.. +.+..+-...++|..-+++.. ....++.........+++.|....|.-+....
T Consensus 209 ----~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 209 ----EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp ----BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred ----ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 0122347778887643 256677677788888887652 11122222234568999998666665554322
Q ss_pred CCeEEEEecCCCCeEEEEecCCCCceEEEEe
Q psy5792 300 IPLIARAGLDGKKQTILAQEIIMPIKDITLD 330 (377)
Q Consensus 300 ~~~I~r~~ldG~~~~~l~~~~~~~P~glalD 330 (377)
.-+|+....+|. ...+.. +..+.|.+++
T Consensus 285 ~v~lw~~~~~g~--~~~~~~-~~~~~~~~~~ 312 (316)
T 3bg1_A 285 KVTLWKESVDGQ--WVCISD-VNKGQGSVSA 312 (316)
T ss_dssp CEEEEEECTTSC--EEEEEE-CC--------
T ss_pred eEEEEEECCCCc--EEEeee-ccCCCCceee
Confidence 345666655554 222222 4445555543
No 284
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.40 E-value=7.9 Score=34.96 Aligned_cols=281 Identities=12% Similarity=0.047 Sum_probs=141.7
Q ss_pred CCccccccCCCCeEEEEeCCCCcEEEEEcCCc--E-EEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCc-
Q psy5792 17 AVASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--V-AKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSN- 90 (377)
Q Consensus 17 ~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~-~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~- 90 (377)
.+..++..+++..|. +-+..+.|..-++++. . ..............|++ .++....+-..++.|...+ ..+..
T Consensus 18 ~v~~l~~sp~g~~la-s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLA-SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp CEEEEEECTTSSCEE-EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE
T ss_pred cEEEEEECCCCCEEE-EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE
Confidence 456788888766653 4455678888888765 2 22222234456778888 3444444444556666666 33322
Q ss_pred -eEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcC
Q psy5792 91 -STVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYN 168 (377)
Q Consensus 91 -~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~ 168 (377)
...+..... +..+++ +++.. ++++....+.|+..++.
T Consensus 97 ~~~~~~~h~~~v~~v~~-sp~~~----------------------------------------~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAW-APSGN----------------------------------------LLATCSRDKSVWVWEVD 135 (345)
T ss_dssp EEEEECCCSSCEEEEEE-CTTSS----------------------------------------EEEEEETTSCEEEEEEC
T ss_pred EEEEccCCCCCceEEEE-eCCCC----------------------------------------EEEEEECCCeEEEEECC
Confidence 223332222 444443 23221 33333333458777776
Q ss_pred CCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEE--EeccccCCCCCCCCcceEEEecc
Q psy5792 169 KNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENI--IEYVETGDPTPVDQFTDIAVDWI 245 (377)
Q Consensus 169 ~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i--~~~~~~~~~~~~~~p~~iavD~~ 245 (377)
.... ...+..+. ....+..+++.+.+..|.... ..+.|...+........+ .. .....+.+|++++.
T Consensus 136 ~~~~--~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~ 205 (345)
T 3fm0_A 136 EEDE--YECVSVLNSHTQDVKHVVWHPSQELLASAS-YDDTVKLYREEEDDWVCCATLE-------GHESTVWSLAFDPS 205 (345)
T ss_dssp TTSC--EEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTSCEEEEEEETTEEEEEEEEC-------CCSSCEEEEEECTT
T ss_pred CCCC--eEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCCcEEEEEecCCCEEEEEEec-------CCCCceEEEEECCC
Confidence 5432 12222222 234578899988666555444 566777766654322211 22 23345889999975
Q ss_pred CCeEEEEcCCCCEEEEEEc--CCCe--------------EEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 246 AQNIYWSDPKENVIEVARL--TGQY--------------RYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~--~g~~--------------~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
+..| .+-...++|.+-+. .+.. ..++..........++..|..+.|.-+.. ...|...+.+
T Consensus 206 g~~l-~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--d~~i~vw~~~ 282 (345)
T 3fm0_A 206 GQRL-ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG--DDAIRVFQED 282 (345)
T ss_dssp SSEE-EEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET--TSCEEEEEEC
T ss_pred CCEE-EEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC--CCeEEEEEeC
Confidence 5444 55444555555443 2211 01111112344678888887776665543 2445444443
Q ss_pred CCC-----eEEE-Ee---cCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 310 GKK-----QTIL-AQ---EIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 310 G~~-----~~~l-~~---~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
... ...+ .. ..-...+.++..+....+..+-. ..++|.--+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s-~Dg~v~~W~~~ 334 (345)
T 3fm0_A 283 PNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS-DDGEVAFWKYQ 334 (345)
T ss_dssp TTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE-TTSCEEEEEEC
T ss_pred CCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC-CCCcEEEEEec
Confidence 221 1111 11 11234566777655444555544 45555544444
No 285
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.31 E-value=9.2 Score=35.50 Aligned_cols=217 Identities=9% Similarity=-0.006 Sum_probs=108.2
Q ss_pred cCCccccccCCCCeEEEEeCCCCcEEEEEcCC---c--E--EEEEeCCCCCceEEEEEE-CCeEEEEcCCCCceEEEcC-
Q psy5792 16 GAVASTLKPQSGPFVYGVKTLSHSLHYVNIEV---K--V--AKVVSMPDAAQVVAAVFY-KGRIIYSDANDGNIRSINL- 86 (377)
Q Consensus 16 ~~~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG---~--~--~~i~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~- 86 (377)
+.+.++++.+.++.++.+-+..+.|..-++.. . . .... ........|++. ++..+++-..++.|...+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY--DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE--ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec--cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEec
Confidence 45677777772334445555667777777654 1 1 1111 234456778883 3444455455667776662
Q ss_pred ---CCCceEEEecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEE
Q psy5792 87 ---DGSNSTVLRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIM 163 (377)
Q Consensus 87 ---~g~~~~~~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~ 163 (377)
+|+........ ....+.+ ++... .....|+. .+..++..++++....+.|+
T Consensus 142 ~~~~~~~~~~~~~~-~i~~~~~-~~~~~-------------~~~~~~~~-----------~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 142 HYQQESEVKFLNCE-CIRKINL-KNFGK-------------NEYAVRMR-----------AFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp EEEETTEEEEEEEE-EEEEEEG-GGGSS-------------CCCEEEEE-----------EEECSSCEEEEEEETTSEEE
T ss_pred cccCCceeeccccc-eeEEEEc-cCccc-------------ccCceEEE-----------EEEcCCCCEEEEEeCCCeEE
Confidence 44443332210 0111111 11000 00001110 00011223444444445688
Q ss_pred EEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEe
Q psy5792 164 GIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVD 243 (377)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD 243 (377)
..++..... ...+........+.++++++.+..|.... ..+.|...++........... ..-..+..+++.
T Consensus 196 iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~ 266 (437)
T 3gre_A 196 IFDIRTLER--LQIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRFNVLIRSWSF------GDHAPITHVEVC 266 (437)
T ss_dssp EEETTTCCE--EEEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEEBC------TTCEEEEEEEEC
T ss_pred EEeCCCCee--eEEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCCccEEEEEec------CCCCceEEEEec
Confidence 888876543 11111111245688999998766665554 568888888864222111110 112235667655
Q ss_pred cc---CCeEEEEcCCCCEEEEEEcCCCeE
Q psy5792 244 WI---AQNIYWSDPKENVIEVARLTGQYR 269 (377)
Q Consensus 244 ~~---~~~lYwtd~~~~~I~~~~~~g~~~ 269 (377)
+. .+.+..+-...+.|.+.++.....
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 42 355666777778899999975543
No 286
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=91.27 E-value=16 Score=38.25 Aligned_cols=147 Identities=6% Similarity=-0.070 Sum_probs=86.1
Q ss_pred EEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEe-ccc---cC
Q psy5792 154 FSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIE-YVE---TG 229 (377)
Q Consensus 154 ~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~-~~~---~~ 229 (377)
++....+.|+..++..... ... +.....+..+++++..+.|+... .++.|...++++........ ... ..
T Consensus 73 ~S~s~D~~v~lWd~~~~~~--~~~---~~~~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQKV--LTT---VFVPGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp EEEETTCEEEEEETTTCSE--EEE---EECSSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred EEEECcCeEEEEECCCCcE--EEE---EcCCCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccceeccccccccc
Confidence 3333344688888865533 111 22335688999999888888776 56889889887543221110 000 00
Q ss_pred CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCC------------------CCCceeEEEcCCCCe
Q psy5792 230 DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG------------------VDQPSALAVDPESGY 291 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~------------------~~~P~~iavdp~~g~ 291 (377)
.....+.+.+|++.+..+.+..+-...+.| .-++........+... .....+++..|. |.
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd-g~ 224 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN-SL 224 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT-SS
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC-CC
Confidence 002234588999998655566666667888 9998876543333221 134689999986 44
Q ss_pred EEEEecCCCCeEEEEecC
Q psy5792 292 LFWSESGKIPLIARAGLD 309 (377)
Q Consensus 292 lywtd~g~~~~I~r~~ld 309 (377)
.+.+-. ....|...++.
T Consensus 225 ~lasgs-~Dg~i~lWd~~ 241 (902)
T 2oaj_A 225 HIITIH-EDNSLVFWDAN 241 (902)
T ss_dssp EEEEEE-TTCCEEEEETT
T ss_pred EEEEEE-CCCeEEEEECC
Confidence 444432 24566666664
No 287
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=90.24 E-value=8.8 Score=33.47 Aligned_cols=136 Identities=8% Similarity=-0.026 Sum_probs=76.1
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEE--cCCCcEEEEEcCCCCcEEEEeccccC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVD--IDHGTISRTHRDGTGRENIIEYVETG 229 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd--~~~~~I~~~~~~G~~~~~i~~~~~~~ 229 (377)
++++....+.|+..++...................+..+++.+....+...- ...+.|...+...........
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~----- 238 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----- 238 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-----
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-----
Confidence 3334433345887777643320001111122233456777766665555432 234567666666444333332
Q ss_pred CCCCCCCcceEEEeccCCeEEEEc-CCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEE
Q psy5792 230 DPTPVDQFTDIAVDWIAQNIYWSD-PKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWS 295 (377)
Q Consensus 230 ~~~~~~~p~~iavD~~~~~lYwtd-~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywt 295 (377)
....+..+++.+..+.++.+. ...++|.+.++........+........++++.|.+.+|.-+
T Consensus 239 ---~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 239 ---AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp ---CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred ---ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 344577888888777777654 356789999987554433344445567899999865555443
No 288
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=89.64 E-value=4.7 Score=38.24 Aligned_cols=125 Identities=6% Similarity=-0.088 Sum_probs=79.9
Q ss_pred CceEEEEEECCCCEEEE---EEcCCCcEEEEEcCCC-----Cc----EEEEeccccCCCCCCCCcceEEEeccCCeEEEE
Q psy5792 185 SLAAKVDFHAAEDYIYW---VDIDHGTISRTHRDGT-----GR----ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWS 252 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~---sd~~~~~I~~~~~~G~-----~~----~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwt 252 (377)
..+.++++++.+..|++ +-...+.|...++... .. ..+... ...-..+.+|++.+..++++.+
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-----~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-----KDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECC-----CSGGGSEEEEEECSSCTTEEEE
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeecc-----CCCCCceEEEEECCCCCCEEEE
Confidence 35788999998888886 4444567777776421 10 111110 0112348889998766788888
Q ss_pred cCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEE
Q psy5792 253 DPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTIL 316 (377)
Q Consensus 253 d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l 316 (377)
-...++|.+.++...............+.+++.+|...+|+.... ...|...++.+.....+
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~--dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ--NGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET--TSCEEEECTTCCEEEEE
T ss_pred EECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC--CCcEEEEccCCcccccc
Confidence 777888999998876432222222456899999997667776653 46788888775544433
No 289
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=89.61 E-value=13 Score=34.59 Aligned_cols=177 Identities=12% Similarity=0.058 Sum_probs=96.6
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcE---EEEecccc
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRE---NIIEYVET 228 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~---~i~~~~~~ 228 (377)
++++....|.|+..++..... ...+ ......+.+++++ .+.++.. ...+.|...++...... ....
T Consensus 185 ~l~sg~~dg~i~vwd~~~~~~--~~~~--~~h~~~v~~l~~~--~~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~---- 253 (435)
T 1p22_A 185 VIITGSSDSTVRVWDVNTGEM--LNTL--IHHCEAVLHLRFN--NGMMVTC-SKDRSIAVWDMASPTDITLRRVLV---- 253 (435)
T ss_dssp EEEEEETTSCEEEEESSSCCE--EEEE--CCCCSCEEEEECC--TTEEEEE-ETTSCEEEEECSSSSCCEEEEEEC----
T ss_pred EEEEEcCCCeEEEEECCCCcE--EEEE--cCCCCcEEEEEEc--CCEEEEe-eCCCcEEEEeCCCCCCceeeeEec----
Confidence 333333344688888876533 1111 1233456777775 4555544 46788888888654322 2222
Q ss_pred CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEec
Q psy5792 229 GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGL 308 (377)
Q Consensus 229 ~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~l 308 (377)
.....+..+++| ++.| ++-...+.|.+.++........+.........++.+ ...|+.... .+.|...++
T Consensus 254 ---~~~~~v~~~~~~--~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~--dg~i~iwd~ 323 (435)
T 1p22_A 254 ---GHRAAVNVVDFD--DKYI-VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSS--DNTIRLWDI 323 (435)
T ss_dssp ---CCSSCEEEEEEE--TTEE-EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEET--TSCEEEEET
T ss_pred ---CCCCcEEEEEeC--CCEE-EEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeC--CCeEEEEEC
Confidence 223346666664 4444 555556889999987655443344444556777775 345555542 467777777
Q ss_pred CCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 309 DGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 309 dG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
........+...-.....+++| ++.| .+-. ..+.|...++.
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~~~--~~~l-~sg~-~dg~i~vwd~~ 364 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIRFD--NKRI-VSGA-YDGKIKVWDLV 364 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEECC--SSEE-EEEE-TTSCEEEEEHH
T ss_pred CCCCEEEEEeCCcCcEEEEEec--CCEE-EEEe-CCCcEEEEECC
Confidence 6433333233222345556653 3444 4444 56677777664
No 290
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=89.61 E-value=0.1 Score=47.15 Aligned_cols=27 Identities=11% Similarity=-0.032 Sum_probs=22.9
Q ss_pred CC-cCCC-CCCceeccccCCCccc---cCCcC
Q psy5792 117 IK-YNKN-ESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 117 ~~-C~~~-~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
.| |..+ ||+|+|.|.+..+++. +.||.
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYR 33 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEE
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcc
Confidence 47 9887 8999999999999887 67876
No 291
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.26 E-value=14 Score=34.32 Aligned_cols=260 Identities=7% Similarity=0.006 Sum_probs=142.7
Q ss_pred CCcEEEEEcCCc-EEEEEeC-CCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCCC
Q psy5792 37 SHSLHYVNIEVK-VAKVVSM-PDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNSG 111 (377)
Q Consensus 37 ~~~I~~~~~dG~-~~~i~~~-~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~~ 111 (377)
.+.|+.-|.... ...++.. .......+|++ .++....+-..++.|...+ .+++....+..... ...+..
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~------ 197 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW------ 197 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE------
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee------
Confidence 456666676554 3333322 23344678888 3445555555667888888 56655544432211 211111
Q ss_pred CcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEE
Q psy5792 112 YDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVD 191 (377)
Q Consensus 112 ~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 191 (377)
++.++.+....+.++..+...... ..............+.
T Consensus 198 -------------------------------------~~~~l~sgs~d~~i~~~d~~~~~~---~~~~~~~h~~~~~~~~ 237 (420)
T 4gga_A 198 -------------------------------------NSYILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGLR 237 (420)
T ss_dssp -------------------------------------ETTEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEE
T ss_pred -------------------------------------CCCEEEEEeCCCceeEeeecccce---eeEEecccccceeeee
Confidence 111333333333466666554433 1111112334567777
Q ss_pred EECCCCEEEEEEcCCCcEEEEEcCCCCc----EEEEeccccCCCCCCCCcceEEEeccCCeEEEEc--CCCCEEEEEEcC
Q psy5792 192 FHAAEDYIYWVDIDHGTISRTHRDGTGR----ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSD--PKENVIEVARLT 265 (377)
Q Consensus 192 ~d~~~~~ly~sd~~~~~I~~~~~~G~~~----~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd--~~~~~I~~~~~~ 265 (377)
+.+.+..+... ...+.|...+...... ..... .....+..+++.+...+++.+- ...++|...++.
T Consensus 238 ~~~~g~~l~s~-~~D~~v~i~~~~~~~~~~~~~~~~~-------~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 238 WAPDGRHLASG-GNDNLVNVWPSAPGEGGWVPLQTFT-------QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEESSCCSSCSCCSEEEC-------CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ecCCCCeeeee-eccccceEEeeccccccceeeeeec-------ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 77755555444 3567777777653221 11111 2334577888887777777653 345789999987
Q ss_pred CCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCC
Q psy5792 266 GQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSN 345 (377)
Q Consensus 266 g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~ 345 (377)
.......+.. ...+..++..|..+.++.+.......|...++........+..--.....+++.+.+..| .+-. ..+
T Consensus 310 t~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l-~S~s-~D~ 386 (420)
T 4gga_A 310 SGACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV-ASAA-ADE 386 (420)
T ss_dssp TTEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE-EEEE-TTT
T ss_pred ccccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-EEEe-cCC
Confidence 7655444443 456788999988888877753235678777776433322233223456788987654444 4444 566
Q ss_pred eEEEEEcc
Q psy5792 346 VLESMDYS 353 (377)
Q Consensus 346 ~i~~~~~~ 353 (377)
+|.-=++.
T Consensus 387 tvriWdv~ 394 (420)
T 4gga_A 387 TLRLWRCF 394 (420)
T ss_dssp EEEEECCS
T ss_pred eEEEEECC
Confidence 66655554
No 292
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.92 E-value=13 Score=33.42 Aligned_cols=157 Identities=10% Similarity=0.070 Sum_probs=93.4
Q ss_pred CceEEEEEEC--CCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEE
Q psy5792 185 SLAAKVDFHA--AEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVA 262 (377)
Q Consensus 185 ~~~~~l~~d~--~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~ 262 (377)
..+..+++++ .+..+.... ..+.|...++.......+... ..-..+..+++.+ .+.++.+-...+.|.+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s-~dg~i~~wd~~~~~~~~~~~~------~~~~~i~~~~~~p-dg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWAD-NRGTIGFQSYEDDSQYIVHSA------KSDVEYSSGVLHK-DSLLLALYSPDGILDVY 197 (343)
T ss_dssp SCEEEEECCC---CCEEEEEE-TTCCEEEEESSSSCEEEEECC------CSSCCCCEEEECT-TSCEEEEECTTSCEEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEe-CCCcEEEEECCCCcEEEEEec------CCCCceEEEEECC-CCCEEEEEcCCCEEEEE
Confidence 4578888887 555554444 678898889875443333320 1222478899997 45666666677889999
Q ss_pred EcCCCeEE-EEeeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCe-EEEEe-cCCCCc---eEEEEeCCCCE
Q psy5792 263 RLTGQYRY-VLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQ-TILAQ-EIIMPI---KDITLDRKNKR 335 (377)
Q Consensus 263 ~~~g~~~~-~l~~~-~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~-~~l~~-~~~~~P---~glalD~~~~~ 335 (377)
++...... ..+.. .......+++.|...+|..+.. . .|...++..... ..+.. ..-..+ ..+++++.+..
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~--~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD--Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES--S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC--C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 99765433 22332 3456799999996666666652 2 777777764322 11110 000011 34888876666
Q ss_pred EEEEEeCCCCeEEEEEcc
Q psy5792 336 VYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 336 LYw~d~~~~~~i~~~~~~ 353 (377)
|..+.. ..+.|...+++
T Consensus 275 l~~~s~-~d~~i~v~~~~ 291 (343)
T 3lrv_A 275 MIAYSN-ESNSLTIYKFD 291 (343)
T ss_dssp EEEEET-TTTEEEEEEEC
T ss_pred EEEecC-CCCcEEEEEEc
Confidence 666544 46667666664
No 293
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.79 E-value=12 Score=32.91 Aligned_cols=190 Identities=14% Similarity=0.072 Sum_probs=97.2
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCC-CEEEEEEcCCCcEEEEEcCCCC--cEEEEeccc
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAE-DYIYWVDIDHGTISRTHRDGTG--RENIIEYVE 227 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~-~~ly~sd~~~~~I~~~~~~G~~--~~~i~~~~~ 227 (377)
++++....+.|+.-++..... ..+..+. ....+..+++.+.. +.++.+-...+.|...++.... ......
T Consensus 69 ~l~s~s~D~~v~iWd~~~~~~---~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~--- 142 (297)
T 2pm7_B 69 ILASCSYDGKVMIWKEENGRW---SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID--- 142 (297)
T ss_dssp EEEEEETTTEEEEEEBSSSCB---CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE---
T ss_pred EEEEEcCCCEEEEEEcCCCce---EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee---
Confidence 444444445688778765422 0111111 23457788888752 3344444466788888876432 122222
Q ss_pred cCCCCCCCCcceEEEeccC------------CeEEEEcCCCCEEEEEEcCCCe----EEEEeeCCCCCceeEEEcCCC--
Q psy5792 228 TGDPTPVDQFTDIAVDWIA------------QNIYWSDPKENVIEVARLTGQY----RYVLISGGVDQPSALAVDPES-- 289 (377)
Q Consensus 228 ~~~~~~~~~p~~iavD~~~------------~~lYwtd~~~~~I~~~~~~g~~----~~~l~~~~~~~P~~iavdp~~-- 289 (377)
........+++.+.. ++++.+-...++|...+++... ....+.......++++.+|..
T Consensus 143 ----~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~ 218 (297)
T 2pm7_B 143 ----AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (297)
T ss_dssp ----CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred ----cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC
Confidence 233346677776532 3566676666778877776432 112223334557899999864
Q ss_pred CeEEEEecCCCCeEEEEecCCC---CeEEEEe-cC-CCCceEEEEeCCCCEEEEEEeCCCC--eEEEEEccC
Q psy5792 290 GYLFWSESGKIPLIARAGLDGK---KQTILAQ-EI-IMPIKDITLDRKNKRVYWCYSVGSN--VLESMDYSG 354 (377)
Q Consensus 290 g~lywtd~g~~~~I~r~~ldG~---~~~~l~~-~~-~~~P~glalD~~~~~LYw~d~~~~~--~i~~~~~~G 354 (377)
+.++.+-. ....|..-+++.. ....+.. .. -.....+++.+.+..|..+. ..+ +|+..+.+|
T Consensus 219 ~~~las~s-~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~--~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 219 RSYMASVS-QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG--GDNKVTLWKENLEG 287 (297)
T ss_dssp SEEEEEEE-TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE--TTSCEEEEEECTTS
T ss_pred ceEEEEEE-CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc--CCCcEEEEEECCCC
Confidence 45555433 2345555555432 1222321 11 23356678876555554443 333 344444443
No 294
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=88.74 E-value=11 Score=32.71 Aligned_cols=259 Identities=7% Similarity=0.001 Sum_probs=137.5
Q ss_pred CCCcEEEEEcCCc--EEEEEeCCCCCceEEEEE-ECCeEEEEcCCCCceEEEc-CCCCceEEEecCCC-ceeEEeeecCC
Q psy5792 36 LSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVF-YKGRIIYSDANDGNIRSIN-LDGSNSTVLRNNAG-ISDFILFSVNS 110 (377)
Q Consensus 36 ~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav-~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~-p~~i~v~~~~~ 110 (377)
..+.|+.-|++.. .+++...........+++ .++....+-..++.|...+ .+|+....+..... ...+. .
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~---~-- 117 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS---W-- 117 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE---E--
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee---c--
Confidence 3567888887654 444431233345678888 4455556656677888888 66655544432211 11111 0
Q ss_pred CCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEE
Q psy5792 111 GYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKV 190 (377)
Q Consensus 111 ~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l 190 (377)
...++.+....+.++......... ..............+
T Consensus 118 --------------------------------------~~~~l~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 156 (318)
T 4ggc_A 118 --------------------------------------NSYILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGL 156 (318)
T ss_dssp --------------------------------------ETTEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEE
T ss_pred --------------------------------------CCCEEEEEecCCceEeeecCCCce---eEEEEcCccCceEEE
Confidence 011233332223344444443322 111112233456677
Q ss_pred EEECCCCEEEEEEcCCCcEEEEEcCCCC----cEEEEeccccCCCCCCCCcceEEEeccCCeEEEE--cCCCCEEEEEEc
Q psy5792 191 DFHAAEDYIYWVDIDHGTISRTHRDGTG----RENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWS--DPKENVIEVARL 264 (377)
Q Consensus 191 ~~d~~~~~ly~sd~~~~~I~~~~~~G~~----~~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwt--d~~~~~I~~~~~ 264 (377)
++...+..|. +-...+.|...++.... ...... ...+.+..++..+...++..+ ....+.|...+.
T Consensus 157 ~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 157 RWAPDGRHLA-SGGNDNLVNVWPSAPGEGGWVPLQTFT-------QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp EECTTSSEEE-EEETTSCEEEEESSCBTTBSCCSEEEC-------CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred EEcCCCCEEE-EEecCcceeEEECCCCcccccceeeec-------ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 7777555555 44456788877775321 111111 223346677777767766543 344578888888
Q ss_pred CCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCC
Q psy5792 265 TGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGS 344 (377)
Q Consensus 265 ~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~ 344 (377)
.......... .......++..|..+.++.+.......|...++........+..--.....+++.+.+..| .+-. ..
T Consensus 229 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l-~S~s-~D 305 (318)
T 4ggc_A 229 CSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV-ASAA-AD 305 (318)
T ss_dssp TTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE-EEEE-TT
T ss_pred cccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-EEEe-cC
Confidence 7765544443 3455788888988888877653235677777776433332232223456778886544433 3434 44
Q ss_pred CeEEEEE
Q psy5792 345 NVLESMD 351 (377)
Q Consensus 345 ~~i~~~~ 351 (377)
++|..=+
T Consensus 306 ~~v~iWd 312 (318)
T 4ggc_A 306 ETLRLWR 312 (318)
T ss_dssp TEEEEEC
T ss_pred CeEEEEE
Confidence 5554433
No 295
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.63 E-value=13 Score=33.39 Aligned_cols=137 Identities=12% Similarity=0.088 Sum_probs=77.9
Q ss_pred eEEEEEcCCCCceeeEEEEecCC-CCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc-EEE--EeccccCCCCCCCC
Q psy5792 161 DIMGIKYNKNESKVTQVLGPLSK-VSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR-ENI--IEYVETGDPTPVDQ 236 (377)
Q Consensus 161 ~I~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~-~~i--~~~~~~~~~~~~~~ 236 (377)
.|+..+++.... ..+..+.+ ...+.++++.+.++.|.-. ...+.|...+++.... +.+ .. .....
T Consensus 84 ~v~iw~~~~~~~---~~~~~~~~h~~~v~~v~~sp~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~~~~-------~h~~~ 152 (345)
T 3fm0_A 84 TTCIWKKNQDDF---ECVTTLEGHENEVKSVAWAPSGNLLATC-SRDKSVWVWEVDEEDEYECVSVLN-------SHTQD 152 (345)
T ss_dssp CEEEEEECCC-E---EEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEECTTSCEEEEEEEC-------CCCSC
T ss_pred cEEEEEccCCCe---EEEEEccCCCCCceEEEEeCCCCEEEEE-ECCCeEEEEECCCCCCeEEEEEec-------CcCCC
Confidence 466666554432 12222332 3457899999866555544 4567888888764332 222 22 23345
Q ss_pred cceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEE--EEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 237 FTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRY--VLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 237 p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~--~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
+..+++.+... +..+-...+.|...++...... ..+........+++++|...+|.-......-+|+.....
T Consensus 153 v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 153 VKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp EEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECT
T ss_pred eEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccC
Confidence 77888887544 4455555567887777654322 223334556789999996666665543224466665443
No 296
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=88.61 E-value=0.15 Score=33.18 Aligned_cols=21 Identities=5% Similarity=0.009 Sum_probs=17.8
Q ss_pred CCCceeccccCCCccc---cCCcC
Q psy5792 123 ESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 123 ~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
+++|+|.|++.+++|. +.||.
T Consensus 19 ~~~C~~~C~n~~Gsy~C~C~~Gy~ 42 (53)
T 1apq_A 19 QPQCQHLCHNYVGGYFCSCRPGYE 42 (53)
T ss_dssp SCTTSSEEEEETTEEEEECSTTCE
T ss_pred CCCCCCEeECCCCCeEEECCCCCe
Confidence 4789999999999988 67764
No 297
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.55 E-value=22 Score=35.83 Aligned_cols=67 Identities=10% Similarity=0.138 Sum_probs=43.3
Q ss_pred CCeEEEEeCCCCcEEEEEcCC-cEEEEEeCCCC----------CceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEEE
Q psy5792 27 GPFVYGVKTLSHSLHYVNIEV-KVAKVVSMPDA----------AQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTVL 94 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~dG-~~~~i~~~~~~----------~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~~ 94 (377)
+++||+... .+.|.-+|... +...-...... ....++++.+++||+... .+.|..+| .+|+..-.+
T Consensus 77 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-DGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-CCEEEEEECCCCCEEeee
Confidence 568988865 46789999754 43332211110 112467889999999854 46899999 788775444
Q ss_pred e
Q psy5792 95 R 95 (377)
Q Consensus 95 ~ 95 (377)
.
T Consensus 155 ~ 155 (677)
T 1kb0_A 155 N 155 (677)
T ss_dssp E
T ss_pred c
Confidence 3
No 298
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=87.79 E-value=26 Score=35.74 Aligned_cols=157 Identities=14% Similarity=0.152 Sum_probs=93.2
Q ss_pred CCEEEEEEcCCC----cEEEEEc---CCC--CcEEEEeccccCCCCCCCCcceEEEe-ccCCeEEEEcCCC----CEEEE
Q psy5792 196 EDYIYWVDIDHG----TISRTHR---DGT--GRENIIEYVETGDPTPVDQFTDIAVD-WIAQNIYWSDPKE----NVIEV 261 (377)
Q Consensus 196 ~~~ly~sd~~~~----~I~~~~~---~G~--~~~~i~~~~~~~~~~~~~~p~~iavD-~~~~~lYwtd~~~----~~I~~ 261 (377)
++++||+....+ .++|... +|. ..+++..........+.-...+.++. +.++.|.|+.... .+|++
T Consensus 126 g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v 205 (751)
T 2xe4_A 126 GKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEF 205 (751)
T ss_dssp TTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEE
T ss_pred CCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEE
Confidence 789999865444 3667776 565 55666652111000111134566777 7777777664432 35999
Q ss_pred EEcCCC-eEEEEeeCCCC-CceeEEEcCCCCeEEEEecCC---CCeEEEEecCCCC--eEEEEec-CCCCceEEEEeCCC
Q psy5792 262 ARLTGQ-YRYVLISGGVD-QPSALAVDPESGYLFWSESGK---IPLIARAGLDGKK--QTILAQE-IIMPIKDITLDRKN 333 (377)
Q Consensus 262 ~~~~g~-~~~~l~~~~~~-~P~~iavdp~~g~lywtd~g~---~~~I~r~~ldG~~--~~~l~~~-~~~~P~glalD~~~ 333 (377)
.++++. .. +...+. ...+++..|.+..||++.... ..+|++.++++.. .+.+..+ .-..-.++.+.+.+
T Consensus 206 ~dl~~g~~~---l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg 282 (751)
T 2xe4_A 206 KRISDPSQT---IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADT 282 (751)
T ss_dssp EETTCTTCC---CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTS
T ss_pred EECCCCCEe---CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCC
Confidence 999876 41 111111 124677888777888876421 2479999998754 2344432 11233467787778
Q ss_pred CEEEEEEeC-CCCeEEEEEccCC
Q psy5792 334 KRVYWCYSV-GSNVLESMDYSGG 355 (377)
Q Consensus 334 ~~LYw~d~~-~~~~i~~~~~~G~ 355 (377)
++|+|+... ....|+.++++++
T Consensus 283 ~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 283 NTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp SEEEEEEECSSCEEEEEEESSSC
T ss_pred CEEEEEecCCCCceEEEEECCCC
Confidence 889887651 3457888888764
No 299
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=86.98 E-value=17 Score=32.62 Aligned_cols=185 Identities=12% Similarity=0.011 Sum_probs=103.0
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++++....+.|+..++..... ...+ ......+.++++.+.+..|.-+. ..+.|...++.+........ ..
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~--~~~~--~~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~-----~~ 159 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTT--YKRF--VGHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGECKFSSAE-----KE 159 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCE--EEEE--ECCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSCEEEECCT-----TT
T ss_pred EEEEEcCCCcEEEEECCCCcE--EEEE--cCCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCCceeeeec-----cc
Confidence 344444445688888765533 1111 12334578999998777766554 56788888887432211110 00
Q ss_pred CCCCCcceEEEeccC---------CeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5792 232 TPVDQFTDIAVDWIA---------QNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAVDPESGYLFWSESGKIPL 302 (377)
Q Consensus 232 ~~~~~p~~iavD~~~---------~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~ 302 (377)
........+++.+.. +.++.+-...++|.+.+..+.....+. ........++++|...+|.-... ...
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~--dg~ 236 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGGK--DKK 236 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEET--TCE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEcC--CCe
Confidence 112235677776543 145566666788888886665444443 33456789999996555555442 467
Q ss_pred EEEEecC-CCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 303 IARAGLD-GKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 303 I~r~~ld-G~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
|...++. .......... -.....+++.+....|... ..+.|...++.
T Consensus 237 v~iwd~~~~~~~~~~~~~-~~~v~~v~~sp~~~~la~~---~d~~v~iw~~~ 284 (343)
T 2xzm_R 237 LLIWDILNLTYPQREFDA-GSTINQIAFNPKLQWVAVG---TDQGVKIFNLM 284 (343)
T ss_dssp EEEEESSCCSSCSEEEEC-SSCEEEEEECSSSCEEEEE---ESSCEEEEESS
T ss_pred EEEEECCCCcccceeecC-CCcEEEEEECCCCCEEEEE---CCCCEEEEEeC
Confidence 7777763 3322222222 2346788887655444332 23446556654
No 300
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=86.04 E-value=19 Score=32.50 Aligned_cols=192 Identities=13% Similarity=0.011 Sum_probs=101.2
Q ss_pred CccccccCCCCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEEEEEECCeEEEEcCCCCceEEEc-CCC-CceEE
Q psy5792 18 VASTLKPQSGPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVAAVFYKGRIIYSDANDGNIRSIN-LDG-SNSTV 93 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~-~~g-~~~~~ 93 (377)
...++..+..+.+..+-...+.|...|.... ...+. ......++++..+.++++. .+.|...+ .++ +....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK---VDAPVKDLFLSREFIVVSY--GDVISVFKFGNPWKRITD 135 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE---CSSCEEEEEECSSEEEEEE--TTEEEEEESSTTCCBSSC
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE---CCCceEEEEEcCCEEEEEE--cCEEEEEECCCCceeeEE
Confidence 4445555556666666666677888887544 44442 2335666777666666653 34566666 333 22211
Q ss_pred EecCCCceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEE-eCCCCeEEEEEcCCCCc
Q psy5792 94 LRNNAGISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFS-VNSGYDIMGIKYNKNES 172 (377)
Q Consensus 94 ~~~~~~p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s-~~~~~~I~~~~l~~~~~ 172 (377)
+.. +.++..+.+ ..+.++ ....|.|+..++.....
T Consensus 136 ~~~---~~~~~~~s~-----------------------------------------~~la~~sg~~~g~v~iwd~~~~~~ 171 (355)
T 3vu4_A 136 DIR---FGGVCEFSN-----------------------------------------GLLVYSNEFNLGQIHITKLQSSGS 171 (355)
T ss_dssp CEE---EEEEEEEET-----------------------------------------TEEEEEESSCTTCEEEEECCC---
T ss_pred ecc---CCceEEEEc-----------------------------------------cEEEEeCCCcCcEEEEEECCCCCc
Confidence 111 222222221 134444 34445577777764320
Q ss_pred ------ee----eEE-EEec-CCCCceEEEEEECCCCEEEEEEcCCCc-EEEEEcCCCCc-EEEEeccccCCCCCCCCcc
Q psy5792 173 ------KV----TQV-LGPL-SKVSLAAKVDFHAAEDYIYWVDIDHGT-ISRTHRDGTGR-ENIIEYVETGDPTPVDQFT 238 (377)
Q Consensus 173 ------~~----~~~-~~~~-~~~~~~~~l~~d~~~~~ly~sd~~~~~-I~~~~~~G~~~-~~i~~~~~~~~~~~~~~p~ 238 (377)
+. ... +..+ .....+.++++.+.+..| .+-...+. |...++..... ..+.. + .....+.
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~~~~~~~~---g---~h~~~v~ 244 (355)
T 3vu4_A 172 ATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGVLVREFRR---G---LDRADVV 244 (355)
T ss_dssp ---------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCCEEEEEEC---T---TCCSCEE
T ss_pred cccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEEEEEc---C---CCCCcEE
Confidence 00 000 1112 233458899999855544 45446677 88888874332 23321 0 1234588
Q ss_pred eEEEeccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 239 DIAVDWIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 239 ~iavD~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
++++.+.+ ++..+-...++|.+.++..
T Consensus 245 ~~~~s~~~-~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 245 DMKWSTDG-SKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEECTTS-CEEEEEETTCEEEEEESSC
T ss_pred EEEECCCC-CEEEEEECCCEEEEEEccC
Confidence 99999754 4445555567888888864
No 301
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=84.16 E-value=22 Score=31.60 Aligned_cols=236 Identities=9% Similarity=0.069 Sum_probs=115.0
Q ss_pred CccccccCCCCeEEEEeCCCCcEEEEEcCCc---EEEEEeCC-CCCceEEEEE-ECCeEEEEcCCCCceEEEcCCC----
Q psy5792 18 VASTLKPQSGPFVYGVKTLSHSLHYVNIEVK---VAKVVSMP-DAAQVVAAVF-YKGRIIYSDANDGNIRSINLDG---- 88 (377)
Q Consensus 18 ~~~~~~d~~~~~ly~~d~~~~~I~~~~~dG~---~~~i~~~~-~~~~p~~lav-~~~~ly~td~~~~~I~~~~~~g---- 88 (377)
+.+++.++. +..+-+..+.|...++... ....+... .......|++ .++.+..+-..++.|...+...
T Consensus 17 v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 17 IWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp EEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred eeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 445555543 4455556788888888653 22222112 3445678888 3445555555567777766321
Q ss_pred ----CceEEEecCCC-ceeEEeeecCCCCcccCCCcCCCCCCceeccccCCCccccCCcCCCcCCCcEEEEEeCCCCeEE
Q psy5792 89 ----SNSTVLRNNAG-ISDFILFSVNSGYDIMGIKYNKNESKVQQVLGPLSKVSLAAKVDFHAGISDFILFSVNSGYDIM 163 (377)
Q Consensus 89 ----~~~~~~~~~~~-p~~i~v~~~~~~~~~~~~~C~~~~g~Cs~~C~~~~~~~~~~G~~~C~~~~~~l~~s~~~~~~I~ 163 (377)
+....+..... +.++++ +++ ..++++....+.|+
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~-sp~----------------------------------------g~~las~s~D~~v~ 132 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAW-SND----------------------------------------GYYLATCSRDKSVW 132 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEE-CTT----------------------------------------SCEEEEEETTSCEE
T ss_pred cccceeEEEEcCCCCcEEEEEE-CCC----------------------------------------CCEEEEEeCCCEEE
Confidence 11122221111 333332 222 12344443334588
Q ss_pred EEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEE--EeccccCCCCCCCCcceE
Q psy5792 164 GIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENI--IEYVETGDPTPVDQFTDI 240 (377)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i--~~~~~~~~~~~~~~p~~i 240 (377)
..++...... ...+..+. ....+..+++.+.+..|. +-...+.|...+......+.+ .. .....+..+
T Consensus 133 iwd~~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~-s~s~D~~i~iW~~~~~~~~~~~~~~-------~h~~~v~~~ 203 (330)
T 2hes_X 133 IWETDESGEE-YECISVLQEHSQDVKHVIWHPSEALLA-SSSYDDTVRIWKDYDDDWECVAVLN-------GHEGTVWSS 203 (330)
T ss_dssp EEECCTTCCC-CEEEEEECCCSSCEEEEEECSSSSEEE-EEETTSCEEEEEEETTEEEEEEEEC-------CCSSCEEEE
T ss_pred EEeccCCCCC-eEEEEEeccCCCceEEEEECCCCCEEE-EEcCCCeEEEEECCCCCeeEEEEcc-------CCCCcEEEE
Confidence 8887432110 12222222 234578999988665554 444567777666543221222 22 233457788
Q ss_pred EEeccC-CeEEEEcCCCCEEEEEEcCCC--------eEEEEeeC-CCCCceeEEEcCCCCeEEEEecCCCCeEEEEecC
Q psy5792 241 AVDWIA-QNIYWSDPKENVIEVARLTGQ--------YRYVLISG-GVDQPSALAVDPESGYLFWSESGKIPLIARAGLD 309 (377)
Q Consensus 241 avD~~~-~~lYwtd~~~~~I~~~~~~g~--------~~~~l~~~-~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ld 309 (377)
++.+.. +.+..+-...++|.+-++.+. .....+.. .......++..+ .+.|.-+.. ...|...+..
T Consensus 204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~l~s~~~--dg~v~iw~~~ 279 (330)
T 2hes_X 204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NGLIASVGA--DGVLAVYEEV 279 (330)
T ss_dssp EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-TSCEEEEET--TSCEEEEEEE
T ss_pred EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-CCEEEEEeC--CCEEEEEEcC
Confidence 888753 344555555566776666432 11111211 234467888875 455544432 3445444443
No 302
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=83.32 E-value=22 Score=30.88 Aligned_cols=148 Identities=11% Similarity=-0.009 Sum_probs=71.4
Q ss_pred CCeEEEEEcCCCCcee----eEEEEec-CCCCceEEEEEECC--CCEEEEEEcCCCcEEEEEcCCCC-cEEE-----Eec
Q psy5792 159 GYDIMGIKYNKNESKV----TQVLGPL-SKVSLAAKVDFHAA--EDYIYWVDIDHGTISRTHRDGTG-RENI-----IEY 225 (377)
Q Consensus 159 ~~~I~~~~l~~~~~~~----~~~~~~~-~~~~~~~~l~~d~~--~~~ly~sd~~~~~I~~~~~~G~~-~~~i-----~~~ 225 (377)
.+.|+..++....... ...+..+ .....+.++++.+. +..|+.+. ..+.|...++.... ...+ ...
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG-NDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec-CCCcEEEecCCChHHhccccccccccc
Confidence 3458877776542100 0112222 23455889999986 55555554 56788888875322 1110 000
Q ss_pred cccCCCCCCCCcceEEEecc--CCeEEEEcCCCCEEEEEEcCCCeEEEE--eeCCCCCceeEEEcCCCC---eEEEEecC
Q psy5792 226 VETGDPTPVDQFTDIAVDWI--AQNIYWSDPKENVIEVARLTGQYRYVL--ISGGVDQPSALAVDPESG---YLFWSESG 298 (377)
Q Consensus 226 ~~~~~~~~~~~p~~iavD~~--~~~lYwtd~~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~g---~lywtd~g 298 (377)
...........+..+++.+. .+.++.+-...+.+............+ +........+++++|..+ .++.+-.
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~- 237 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC- 237 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE-
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc-
Confidence 00000012334667777764 244444444445554444444332222 222344568999998652 4444432
Q ss_pred CCCeEEEEec
Q psy5792 299 KIPLIARAGL 308 (377)
Q Consensus 299 ~~~~I~r~~l 308 (377)
....|...++
T Consensus 238 ~dg~i~iwd~ 247 (351)
T 3f3f_A 238 KDGRIRIFKI 247 (351)
T ss_dssp TTSCEEEEEE
T ss_pred CCCeEEEEeC
Confidence 2344444443
No 303
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=80.12 E-value=32 Score=30.61 Aligned_cols=107 Identities=9% Similarity=-0.008 Sum_probs=59.6
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++.+....+.|+..++..... ....+.......+..++|.+.+..|..+. .+.|...++........+.. ..
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~-~~--- 255 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPT-YT--- 255 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCC-CB---
T ss_pred EEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecc-cc---
Confidence 555544555699999876643 10122221246688999998777777766 33888888864322111110 00
Q ss_pred CCCCCc--ceEEEeccCCeEEEEcCCCCEEEEEEcCC
Q psy5792 232 TPVDQF--TDIAVDWIAQNIYWSDPKENVIEVARLTG 266 (377)
Q Consensus 232 ~~~~~p--~~iavD~~~~~lYwtd~~~~~I~~~~~~g 266 (377)
...... ..+++++.+..|..+....+.|.+.+++.
T Consensus 256 ~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 256 IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 000111 35899976665655444356788777754
No 304
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=76.11 E-value=52 Score=30.84 Aligned_cols=172 Identities=9% Similarity=0.026 Sum_probs=86.8
Q ss_pred EEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCC
Q psy5792 152 ILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDP 231 (377)
Q Consensus 152 l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~ 231 (377)
++.+....|.|+..++..... ..........+.++++.+.+..|+... ..+.|...+.++.....+...
T Consensus 164 ~las~s~Dg~v~iwD~~~~~~----~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~~~~------ 232 (434)
T 2oit_A 164 MVAVCLADGSIAVLQVTETVK----VCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVIPCP------ 232 (434)
T ss_dssp EEEEEETTSCEEEEEESSSEE----EEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEECCC------
T ss_pred EEEEEECCCeEEEEEcCCCcc----eeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccccCC------
Confidence 344333344588888765521 111222234688999999777777666 568898888885433333220
Q ss_pred CCCC---CcceEEEeccCCeEEE---EcCC-----CCEEEEEEcCCC-----eE-EEEeeC----CCCCceeEEEc--CC
Q psy5792 232 TPVD---QFTDIAVDWIAQNIYW---SDPK-----ENVIEVARLTGQ-----YR-YVLISG----GVDQPSALAVD--PE 288 (377)
Q Consensus 232 ~~~~---~p~~iavD~~~~~lYw---td~~-----~~~I~~~~~~g~-----~~-~~l~~~----~~~~P~~iavd--p~ 288 (377)
.... ...-.++.|.....|. +... ...+...++... .. .....- +..++..+.+. +.
T Consensus 233 ~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~d 312 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEE 312 (434)
T ss_dssp TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGG
T ss_pred cccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhcc
Confidence 1111 1134556665666665 2221 123556665432 11 111111 13334455444 45
Q ss_pred CCeEEEEecCCCCeEEEEecCC--CCeEEEEec-------------CCCCceEEEEeCCCCE
Q psy5792 289 SGYLFWSESGKIPLIARAGLDG--KKQTILAQE-------------IIMPIKDITLDRKNKR 335 (377)
Q Consensus 289 ~g~lywtd~g~~~~I~r~~ldG--~~~~~l~~~-------------~~~~P~glalD~~~~~ 335 (377)
-+.+|.+... ...|.....++ ..-++.... +-..|.|+++|.....
T Consensus 313 w~l~~v~s~~-s~dv~vl~~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d~~~~~ 373 (434)
T 2oit_A 313 WDLVLAASAA-STEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQV 373 (434)
T ss_dssp GTEEEEEETT-CSBCEEEEECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEECCCCC
T ss_pred CCEEEEecCC-CCceeEEEecCCCCccEEEeccccccccccCCCCCCCceeeEEEEEccCCc
Confidence 5788888764 34444443333 222112111 1346999999987643
No 305
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=72.26 E-value=1 Score=34.11 Aligned_cols=29 Identities=17% Similarity=0.072 Sum_probs=24.5
Q ss_pred cCCC-cCCCCCCceeccccCCCccc---cCCcC
Q psy5792 115 MGIK-YNKNESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 115 ~~~~-C~~~~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
...| |..++++|++.|++.+++|. +.||.
T Consensus 27 Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~ 59 (107)
T 2w2n_E 27 MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQ 59 (107)
T ss_dssp BSCCGGGTGGGGCSSEEECCSBSCEEECCTTCE
T ss_pred CcCccCcCCCCCCCCEeEeCCCCeEEECCCCcc
Confidence 3678 98888999999999999887 77774
No 306
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=72.22 E-value=51 Score=28.95 Aligned_cols=182 Identities=11% Similarity=-0.013 Sum_probs=88.6
Q ss_pred CeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCC-CEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCc
Q psy5792 160 YDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAE-DYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQF 237 (377)
Q Consensus 160 ~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~-~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p 237 (377)
+.|+..++..... ..+..+. ....+.++++.+.. +.++.+-...+.|...++.+......... .. ......
T Consensus 81 ~~v~iWd~~~~~~---~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~-~~---~h~~~v 153 (316)
T 3bg1_A 81 RKVIIWREENGTW---EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI-NN---AHTIGC 153 (316)
T ss_dssp SCEEEECCSSSCC---CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB-TT---SSSSCB
T ss_pred CEEEEEECCCCcc---eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee-ec---cccCCc
Confidence 3477766654321 1111122 23346788888753 45555555677888777764322211110 00 111224
Q ss_pred ceEEEeccC----------------CeEEEEcCCCCEEEEEEcCCCe---EEEEeeCCCCCceeEEEcCCC---CeEEEE
Q psy5792 238 TDIAVDWIA----------------QNIYWSDPKENVIEVARLTGQY---RYVLISGGVDQPSALAVDPES---GYLFWS 295 (377)
Q Consensus 238 ~~iavD~~~----------------~~lYwtd~~~~~I~~~~~~g~~---~~~l~~~~~~~P~~iavdp~~---g~lywt 295 (377)
..+++.+.. +.++.+-...++|..-++.... ....+.......++++..|.. +.++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEE
Confidence 455554421 2455565556777777775431 111223334456899999864 234444
Q ss_pred ecCCCCeEEEEecCCC----CeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEE
Q psy5792 296 ESGKIPLIARAGLDGK----KQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMD 351 (377)
Q Consensus 296 d~g~~~~I~r~~ldG~----~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~ 351 (377)
-. ....|...+++.. ....++...-.....+++.+.+..|..+. ..++|..-+
T Consensus 234 ~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~--~D~~v~lw~ 290 (316)
T 3bg1_A 234 CS-QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG--GDNKVTLWK 290 (316)
T ss_dssp EE-TTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE--SSSCEEEEE
T ss_pred Ec-CCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc--CCCeEEEEE
Confidence 32 2456666665531 11122222124567788876555554443 344444443
No 307
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=72.15 E-value=60 Score=29.75 Aligned_cols=192 Identities=11% Similarity=0.036 Sum_probs=98.5
Q ss_pred cEEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECC-CCEEEEEEcCCC----cEEEEEcCCCCcEEEEe
Q psy5792 150 DFILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAA-EDYIYWVDIDHG----TISRTHRDGTGRENIIE 224 (377)
Q Consensus 150 ~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~-~~~ly~sd~~~~----~I~~~~~~G~~~~~i~~ 224 (377)
..|+++.... +..+..+....++. .+.+......+.+|++|+. .+.||..-. .+ .|++..-.|...+.+..
T Consensus 23 g~l~vgt~~G--l~~~~~~~~g~~W~-~~~~~~~~~~v~~i~~dp~~~~~l~~g~~-~g~~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKG--AWFLASDPARRTWE-LRGPVFLGHTIHHIVQDPREPERMLMAAR-TGHLGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETTE--EEEEEECTTSCSEE-EEEEESTTSEEEEEEECSSSTTCEEEEEE-C--CCEEEEEESSTTSCCEECSB
T ss_pred CEEEEEecCc--eEEEECCCCCCCce-ECCccCCCCceEEEEECCCCCCeEEEEec-CCCCCccEEEeCCCCCCceECCc
Confidence 3566666555 66666543211111 2212223346889999973 467777643 23 68776444443333321
Q ss_pred ccccCCCC------CCCCcceEEEecc--CCeEEEEcCCCCEEEEEEcCCCeEEEEeeC------------------CCC
Q psy5792 225 YVETGDPT------PVDQFTDIAVDWI--AQNIYWSDPKENVIEVARLTGQYRYVLISG------------------GVD 278 (377)
Q Consensus 225 ~~~~~~~~------~~~~p~~iavD~~--~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~------------------~~~ 278 (377)
........ ......+|++|+. .+.||..-. .+.|++.+-.|..=+.+... ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCC
Confidence 00000000 1123557899874 577776432 35688877666542222110 011
Q ss_pred CceeEEEcCC-CCeEEEEecCCCCeEEEEecCCCCeEEEEec---C-C--------CCceEEEEeCCC-CEEEEEEeCCC
Q psy5792 279 QPSALAVDPE-SGYLFWSESGKIPLIARAGLDGKKQTILAQE---I-I--------MPIKDITLDRKN-KRVYWCYSVGS 344 (377)
Q Consensus 279 ~P~~iavdp~-~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~---~-~--------~~P~glalD~~~-~~LYw~d~~~~ 344 (377)
....|++||. .+.||+... ...|++..-.|..=+.+... . + ..+..|++|+.+ +.||....
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~--~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--- 252 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMS--SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--- 252 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEE--TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET---
T ss_pred ceeEEEECCCCCCEEEEEEC--CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC---
Confidence 2368999985 467888753 24677775555433332211 0 0 125678888754 66766543
Q ss_pred CeEEEEE
Q psy5792 345 NVLESMD 351 (377)
Q Consensus 345 ~~i~~~~ 351 (377)
+.|++..
T Consensus 253 ~gl~~s~ 259 (394)
T 3b7f_A 253 CGIYRMD 259 (394)
T ss_dssp TEEEEEE
T ss_pred CeEEEeC
Confidence 3466554
No 308
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=66.38 E-value=1.1e+02 Score=30.38 Aligned_cols=131 Identities=10% Similarity=0.014 Sum_probs=83.3
Q ss_pred ceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCc--------EEEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCC
Q psy5792 186 LAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGR--------ENIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKEN 257 (377)
Q Consensus 186 ~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~--------~~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~ 257 (377)
...+++|.+.++.|+.+. ..+.|...++.+... .++-.. .. .....+..+++-+. + +.+-...+
T Consensus 131 sv~svafSPDG~~LAsgs-~DGtVkIWd~~~~~l~~~~~i~l~ti~~~-~~---gh~~~V~sVawSPd-g--Laass~D~ 202 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGN-EDGELQFFSIRKNSENTPEFYFESSIRLS-DA---GSKDWVTHIVWYED-V--LVAALSNN 202 (588)
T ss_dssp CEEEEEECSSSSCEEEEE-TTSEEEEEECCCCTTTCCCCEEEEEEECS-CT---TCCCCEEEEEEETT-E--EEEEETTC
T ss_pred cEEEEEEcCCCCEEEEEc-CCCEEEEEECCCCccccccceeeeeeecc-cc---cccccEEEEEEcCC-c--EEEEeCCC
Confidence 478999999888888876 468888888876532 222210 00 12346888888764 3 45666678
Q ss_pred EEEEEEcCCCeE----EEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCCCCeEEEEecCCCCceEEEE
Q psy5792 258 VIEVARLTGQYR----YVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDGKKQTILAQEIIMPIKDITL 329 (377)
Q Consensus 258 ~I~~~~~~g~~~----~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~~P~glal 329 (377)
.|..-++++... +++....-....+++.. +..|--+- ...|...++.+.....+.........++++
T Consensus 203 tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~---~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 203 SVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC---PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp CEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC---SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred eEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe---CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 899989988663 23422334567888886 34555442 368888888877665544333445667777
No 309
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=65.96 E-value=1.2e+02 Score=30.76 Aligned_cols=169 Identities=15% Similarity=0.153 Sum_probs=91.1
Q ss_pred ceEEEEEECCC-CEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEecc-CCeEEEEcCC--------
Q psy5792 186 LAAKVDFHAAE-DYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWI-AQNIYWSDPK-------- 255 (377)
Q Consensus 186 ~~~~l~~d~~~-~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~-~~~lYwtd~~-------- 255 (377)
++.+|++++.+ +.||.. ...+.|+|..-.|..-+.+....... .-......+|++|+. .+.||.+-..
T Consensus 24 ~i~~i~~~p~~~~~~~~~-~~~ggv~rS~D~G~tW~~i~~~~~~~-~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYAR-AAIGGAYRWDPSTETWIPLLDHFQMD-EYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp CCCEEEECSSSTTCEEEE-CSSSCEEEEETTTTEEEECCTTCCGG-GGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred eeeEEEECCCCCCEEEEE-ecCCcEEEeCCCCCCEEECcCccCcc-cccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 78899999875 455553 34578998876665555543200000 000123679999984 4678887432
Q ss_pred CCEEEEEEcCCCe-EEEEeeCCC--C-----CceeEEEcCCC-CeEEEEecCCCCeEEEEecCCCCeEEEEecCCC----
Q psy5792 256 ENVIEVARLTGQY-RYVLISGGV--D-----QPSALAVDPES-GYLFWSESGKIPLIARAGLDGKKQTILAQEIIM---- 322 (377)
Q Consensus 256 ~~~I~~~~~~g~~-~~~l~~~~~--~-----~P~~iavdp~~-g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~~~---- 322 (377)
...|++..=.|+. ..+...... . ....|++||.+ +.||.... ....|+|..=.|..=+. +.. +.
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g~gl~~S~DgG~tW~~-~~~-~~~~~~ 178 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CGNGLWRSTDYGVTWSK-VES-FPNPGT 178 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TTCCEEEESSTTSSCEE-CTT-CCCCCC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cCCcEEEeCCCCcceec-ccC-CCCCcc
Confidence 3467777655653 333221110 1 12689999976 56776642 11567766444432222 211 11
Q ss_pred --------------CceEEEEeCCC-------CEEEEEEeCCC-CeEEEEEccCCceEEEE
Q psy5792 323 --------------PIKDITLDRKN-------KRVYWCYSVGS-NVLESMDYSGGSKMQLK 361 (377)
Q Consensus 323 --------------~P~glalD~~~-------~~LYw~d~~~~-~~i~~~~~~G~~~~~~~ 361 (377)
....+++|+.+ .+||.+-. .. ..|++ ..||+...+.+
T Consensus 179 ~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~-~~~~~v~~-S~DgG~tW~~~ 237 (737)
T 2cn3_A 179 YIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVA-DKNESIYR-STDGGVTWKAV 237 (737)
T ss_dssp CBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEES-CSSCCEEE-ESSTTSCCEEC
T ss_pred cccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEec-CCCccEEE-EcCCCCceEEC
Confidence 12347777643 48888764 32 24544 47776655543
No 310
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=62.50 E-value=1.4e+02 Score=30.50 Aligned_cols=171 Identities=16% Similarity=0.152 Sum_probs=91.8
Q ss_pred CCceEEEEEECCC-CEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCCCCcceEEEeccC-CeEEEEcCC-C----
Q psy5792 184 VSLAAKVDFHAAE-DYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPVDQFTDIAVDWIA-QNIYWSDPK-E---- 256 (377)
Q Consensus 184 ~~~~~~l~~d~~~-~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~~iavD~~~-~~lYwtd~~-~---- 256 (377)
..++.+|++++.+ +.+|... ..+.|+|..-.|..-+.+....... .-......+|++|+.+ +.+|..-.. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~-~~ggv~rS~DgG~tW~~~~~~~~~~-~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYART-DIGGAYRWDAGTSKWIPLNDFIEAQ-DMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEE-SSSCEEEEETTTTEEEESCTTCCGG-GGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEe-cCCCEEEecCCCCCeeECccCCCcc-cccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 3468888888865 4555543 4567888776665544433200000 0012347889999743 567776432 2
Q ss_pred CEEEEEEcCCCeEEEEeeC-CC-------CCceeEEEcCCCC-eEEEEecCCCCeEEEEecCCCCeEEEEecC------C
Q psy5792 257 NVIEVARLTGQYRYVLISG-GV-------DQPSALAVDPESG-YLFWSESGKIPLIARAGLDGKKQTILAQEI------I 321 (377)
Q Consensus 257 ~~I~~~~~~g~~~~~l~~~-~~-------~~P~~iavdp~~g-~lywtd~g~~~~I~r~~ldG~~~~~l~~~~------~ 321 (377)
..|++..=.|..=+.+... .. .....|+++|.+. .+|... ....|++..=.|..=+. +... -
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~--~~~gl~~S~DgG~TW~~-~~~~~~~~~~~ 168 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT--RTEGIWKSSDRAKTWTN-VTSIPDAFTNG 168 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC--SSSCEEEESSTTSSCEE-ETTSCCCCSTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe--ccCCEEEECCCCcccCC-CccCccccCCC
Confidence 6788776666543333211 10 1235799998754 555543 13567776544433222 2210 0
Q ss_pred CCceEEEEeCCC-CEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 322 MPIKDITLDRKN-KRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 322 ~~P~glalD~~~-~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
.....|++|+.+ +.||..-. ....|++ ..||+...+.+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~-~~~~v~~-S~DgG~TW~~~ 207 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASAT-APQGMYV-THDGGVSWEPV 207 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEES-STTCEEE-ESSTTSSCEEC
T ss_pred CCeEEEEECCCCCCEEEEEEc-CCCeEEE-EcCCCcCcccC
Confidence 223467787654 57777665 4355554 46766555543
No 311
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=61.77 E-value=1.2e+02 Score=29.55 Aligned_cols=71 Identities=11% Similarity=0.036 Sum_probs=43.6
Q ss_pred cccccCCCCeEEEEeCCCCcEEEEEc-CCc-EEEEEeCCCC----CceEEEEEECCeEEEEcCC-----CCceEEEc-CC
Q psy5792 20 STLKPQSGPFVYGVKTLSHSLHYVNI-EVK-VAKVVSMPDA----AQVVAAVFYKGRIIYSDAN-----DGNIRSIN-LD 87 (377)
Q Consensus 20 ~~~~d~~~~~ly~~d~~~~~I~~~~~-dG~-~~~i~~~~~~----~~p~~lav~~~~ly~td~~-----~~~I~~~~-~~ 87 (377)
+++++ +++||+.. ..+.|..+|. +|+ +-+.- .... .....-.+.++.||+.... .+.|..+| .+
T Consensus 110 ~~~~~--~~~v~v~~-~dg~l~alD~~tG~~~W~~~-~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t 185 (571)
T 2ad6_A 110 GLAYG--AGQIVKKQ-ANGHLLALDAKTGKINWEVE-VCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT 185 (571)
T ss_dssp CCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEE-CCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT
T ss_pred ccEEE--CCEEEEEe-CCCEEEEEECCCCCEEEEec-CCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCC
Confidence 44553 56888874 3578999997 566 33331 1110 0111223578999998764 57899999 78
Q ss_pred CCceEEE
Q psy5792 88 GSNSTVL 94 (377)
Q Consensus 88 g~~~~~~ 94 (377)
|+.+=.+
T Consensus 186 G~~~W~~ 192 (571)
T 2ad6_A 186 GELKWRA 192 (571)
T ss_dssp CCEEEEE
T ss_pred CcEEEEE
Confidence 8775444
No 312
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=61.34 E-value=1.7 Score=33.06 Aligned_cols=27 Identities=4% Similarity=-0.189 Sum_probs=22.6
Q ss_pred CC-cCCCCCCceeccccCCCccc---cCCcC
Q psy5792 117 IK-YNKNESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 117 ~~-C~~~~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
.+ |..++++|+|.|++..++|. +.||.
T Consensus 54 ~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 54 FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp SSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred CCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence 45 88788999999999999988 67765
No 313
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=59.62 E-value=92 Score=27.39 Aligned_cols=96 Identities=8% Similarity=0.042 Sum_probs=57.5
Q ss_pred CceEEEEEECCCCEEEEEEcCCCcEEEEEcCCC--CcEEE--EeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEE
Q psy5792 185 SLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGT--GRENI--IEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIE 260 (377)
Q Consensus 185 ~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~--~~~~i--~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~ 260 (377)
..+.++++.+.+..|.-. ...+.|...+++.. ..+.+ .. .....+..+++.+. +.++.+-...++|.
T Consensus 108 ~~V~~v~~sp~g~~las~-s~D~~v~iwd~~~~~~~~~~~~~~~-------~h~~~v~~v~~~p~-~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 108 NEVKGVAWSNDGYYLATC-SRDKSVWIWETDESGEEYECISVLQ-------EHSQDVKHVIWHPS-EALLASSSYDDTVR 178 (330)
T ss_dssp -CEEEEEECTTSCEEEEE-ETTSCEEEEECCTTCCCCEEEEEEC-------CCSSCEEEEEECSS-SSEEEEEETTSCEE
T ss_pred CcEEEEEECCCCCEEEEE-eCCCEEEEEeccCCCCCeEEEEEec-------cCCCceEEEEECCC-CCEEEEEcCCCeEE
Confidence 457889999866555544 45678888887422 22222 22 23345788888874 55556666667777
Q ss_pred EEEcCCC--eEEEEeeCCCCCceeEEEcCCC
Q psy5792 261 VARLTGQ--YRYVLISGGVDQPSALAVDPES 289 (377)
Q Consensus 261 ~~~~~g~--~~~~l~~~~~~~P~~iavdp~~ 289 (377)
.-++... .....+........+++++|..
T Consensus 179 iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 179 IWKDYDDDWECVAVLNGHEGTVWSSDFDKTE 209 (330)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred EEECCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence 7766543 2222333344567889999863
No 314
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=58.09 E-value=1.4e+02 Score=28.86 Aligned_cols=131 Identities=7% Similarity=-0.029 Sum_probs=73.9
Q ss_pred EEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEE--EECCCC-EEEEEEcCCCcEEEEEcCCCC-cEEEEecccc
Q psy5792 153 LFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVD--FHAAED-YIYWVDIDHGTISRTHRDGTG-RENIIEYVET 228 (377)
Q Consensus 153 ~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~--~d~~~~-~ly~sd~~~~~I~~~~~~G~~-~~~i~~~~~~ 228 (377)
+++....|.|+..++..... ...... .....+.+++ +.+ .+ .++.+-...+.|...++.... ...+...
T Consensus 280 lasgs~DgtV~lWD~~~~~~--~~~~~~-~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~--- 352 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEV--PSFYDQ-VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR--- 352 (524)
T ss_dssp EEEEETTSEEEEEETTBCSS--CSEEEE-CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEE---
T ss_pred EEEEeCCCEEEEEECCCCCC--ceEEee-cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccc---
Confidence 34444445788888874322 011111 1234466774 333 33 677777777888888875322 2233220
Q ss_pred CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeE-EEEeeCCCCCceeEEEcCCCCeEEEE
Q psy5792 229 GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYR-YVLISGGVDQPSALAVDPESGYLFWS 295 (377)
Q Consensus 229 ~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~lywt 295 (377)
.....+..+++.+. +..+.+-...+.|...++....+ .++.. ......++++.|....|.-+
T Consensus 353 ---~~~~~v~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 353 ---FRGSNLVPVVYCPQ-IYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp ---CSCCSCCCEEEETT-TTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEE
T ss_pred ---cccCcccceEeCCC-cCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEE
Confidence 11123578899875 44566666667888888876543 34433 45667899999865544433
No 315
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=56.38 E-value=1.7e+02 Score=29.31 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=19.8
Q ss_pred EEECCeEEEEcCCCCceEEEc-CCCCce
Q psy5792 65 VFYKGRIIYSDANDGNIRSIN-LDGSNS 91 (377)
Q Consensus 65 av~~~~ly~td~~~~~I~~~~-~~g~~~ 91 (377)
.+.++.||++.. .+.|+.+| .+|+.+
T Consensus 74 ~v~~g~vyv~~~-~~~v~AlD~~tG~~~ 100 (677)
T 1kb0_A 74 VVVDGIMYVSAS-WSVVHAIDTRTGNRI 100 (677)
T ss_dssp EEETTEEEEECG-GGCEEEEETTTTEEE
T ss_pred EEECCEEEEECC-CCeEEEEECCCCcEE
Confidence 357999999975 46788888 778664
No 316
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=55.96 E-value=1.2e+02 Score=27.52 Aligned_cols=62 Identities=8% Similarity=0.004 Sum_probs=37.3
Q ss_pred cCCeEEE-EcCCCCEEEEEEcCCC-eEEEEeeCCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC
Q psy5792 245 IAQNIYW-SDPKENVIEVARLTGQ-YRYVLISGGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG 310 (377)
Q Consensus 245 ~~~~lYw-td~~~~~I~~~~~~g~-~~~~l~~~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG 310 (377)
..+.+|. +-...++|...+.... ....+.. .-...++++.+|...+|-.+.. ..+..+.+-|
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~as~---~Gv~lvrL~g 389 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAIATE---GSVLLTRLMG 389 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEEEES---SEEEEEEEGG
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEEEeC---CCeEEEEEeC
Confidence 3444444 4455688999888754 3334443 2345689999997666665542 3555555544
No 317
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=55.29 E-value=1.2e+02 Score=27.45 Aligned_cols=196 Identities=12% Similarity=0.012 Sum_probs=97.4
Q ss_pred EEEEEeCCCCeEEEEEcCCCCceeeEEEEecCCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcE-EEEeccccC
Q psy5792 151 FILFSVNSGYDIMGIKYNKNESKVTQVLGPLSKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRE-NIIEYVETG 229 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~-~i~~~~~~~ 229 (377)
.++.+.+..+.|+.-++..... ..........+.++++.+.+..+..+-...+.|...++...... .........
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~~----~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~ 232 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEGP----ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK 232 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTEE----EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CS
T ss_pred CEEEEEECCCeEEEEECCCCce----eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcc
Confidence 4666665556688777754422 22233344567899999877666776667788888887532211 110000000
Q ss_pred -----------------CCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEE-EEee-----------------
Q psy5792 230 -----------------DPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRY-VLIS----------------- 274 (377)
Q Consensus 230 -----------------~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~-~l~~----------------- 274 (377)
..........++.....+....+-...++|.+-++...... .+..
T Consensus 233 ~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 233 NPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI 312 (393)
T ss_dssp CCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEE
T ss_pred cceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence 00011224455554344555555555667776666432211 1100
Q ss_pred CCCCCceeEEEcCCCCeEEEEecCCCCeEEEEecCC-CCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 275 GGVDQPSALAVDPESGYLFWSESGKIPLIARAGLDG-KKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 275 ~~~~~P~~iavdp~~g~lywtd~g~~~~I~r~~ldG-~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
.......+....|..+.+|.+-.+....|...+... .....+... -.....++..+.+..|-.+.. +.+..+.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~-~~~V~svafspdG~~LA~as~---~Gv~lvrL~ 388 (393)
T 4gq1_A 313 SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL-GMPIVDFCWHQDGSHLAIATE---GSVLLTRLM 388 (393)
T ss_dssp CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC-SSCEEEEEECTTSSEEEEEES---SEEEEEEEG
T ss_pred cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC-CCcEEEEEEcCCCCEEEEEeC---CCeEEEEEe
Confidence 001122233344445555555433356777777663 333444433 245678999877666655443 445556555
Q ss_pred C
Q psy5792 354 G 354 (377)
Q Consensus 354 G 354 (377)
|
T Consensus 389 g 389 (393)
T 4gq1_A 389 G 389 (393)
T ss_dssp G
T ss_pred C
Confidence 4
No 318
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=51.20 E-value=2.1e+02 Score=29.02 Aligned_cols=174 Identities=16% Similarity=0.144 Sum_probs=93.0
Q ss_pred CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEeccccC-CC-C--CCCCcceEEEecc-CCeEEEEcC---
Q psy5792 183 KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVETG-DP-T--PVDQFTDIAVDWI-AQNIYWSDP--- 254 (377)
Q Consensus 183 ~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~-~~-~--~~~~p~~iavD~~-~~~lYwtd~--- 254 (377)
...++.+|++++.+..++|+-...+.|+|..-.|..-+.+....... .+ . ......+|++|+. .+.||....
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 44578899999877444444445677887766565444443200000 00 0 2234788999985 466777543
Q ss_pred ---CCCEEEEEEcCCCe-EEEEeeCCC-----CCc--eeEEEcCCC-CeEEEEecCCCCeEEEEecCCCCeEEEEecC--
Q psy5792 255 ---KENVIEVARLTGQY-RYVLISGGV-----DQP--SALAVDPES-GYLFWSESGKIPLIARAGLDGKKQTILAQEI-- 320 (377)
Q Consensus 255 ---~~~~I~~~~~~g~~-~~~l~~~~~-----~~P--~~iavdp~~-g~lywtd~g~~~~I~r~~ldG~~~~~l~~~~-- 320 (377)
....|++..=.|+. .++...... .+. ..|+++|.+ +.+|.... ...|+|..=.|..=+ .+...
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~--~~~l~~S~DgG~TW~-~~~~~~~ 175 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR--TQGLWRSTDRAQTWS-RMNQLPD 175 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS--SSCEEEESSTTSSCE-ECTTSCC
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC--CCcEEEECCCCcCcc-ccccCcc
Confidence 24677777655643 333221111 111 369999874 66776642 357777643343222 22210
Q ss_pred ----CCCceEEEEeCCC-CEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 321 ----IMPIKDITLDRKN-KRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 321 ----~~~P~glalD~~~-~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
-.....|++|+.+ ++||.+-. ..+.|++ ..||+...+.+
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~ 219 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASH-AVGGLWV-TWDGGANWSQV 219 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEES-STTCEEE-ESSSSSSCEEC
T ss_pred cCCCccceEEEEECCCCCCEEEEEEe-CCCeEEE-ECCCCCCcccc
Confidence 0123467888654 57888766 4333443 35666554443
No 319
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=50.26 E-value=4.4 Score=33.07 Aligned_cols=28 Identities=7% Similarity=-0.167 Sum_probs=22.2
Q ss_pred CCC-cCCCCCC---ceeccccCCCccc---cCCcC
Q psy5792 116 GIK-YNKNESK---VQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~~g~---Cs~~C~~~~~~~~---~~G~~ 143 (377)
..+ |..++++ |+|.|.+.++++. +.||.
T Consensus 123 di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp ECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEE
T ss_pred ccCcccCCCCCCCccCCccccCCCCEEEeCCCCcE
Confidence 457 9887765 9999999999877 56664
No 320
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=49.83 E-value=2e+02 Score=28.45 Aligned_cols=134 Identities=9% Similarity=-0.002 Sum_probs=86.6
Q ss_pred CCcceEEEeccCCeEEEEcCCCCEEEEEEcCC----------CeEEEEeeC--CCCCceeEEEcCCCCeEEEEecCCCCe
Q psy5792 235 DQFTDIAVDWIAQNIYWSDPKENVIEVARLTG----------QYRYVLISG--GVDQPSALAVDPESGYLFWSESGKIPL 302 (377)
Q Consensus 235 ~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g----------~~~~~l~~~--~~~~P~~iavdp~~g~lywtd~g~~~~ 302 (377)
+.|.|+-+++.+..+|.+.....++.+++.+. ..+.+++.. -.-.|...++|+ +|+.|-|=.- .++
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfi-dSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFI-DSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETT-TTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeee-cce
Confidence 56999999999999999999999999999863 122222221 133599999998 7899988754 577
Q ss_pred EEEEecC-------CCCeEEEEec-C-CCCceEEEE------eCCCCEEEEEEeC-----------CCCeEEEEEccCCc
Q psy5792 303 IARAGLD-------GKKQTILAQE-I-IMPIKDITL------DRKNKRVYWCYSV-----------GSNVLESMDYSGGS 356 (377)
Q Consensus 303 I~r~~ld-------G~~~~~l~~~-~-~~~P~glal------D~~~~~LYw~d~~-----------~~~~i~~~~~~G~~ 356 (377)
|-+-+++ |.....++++ + -.+|--+.. +..++.|.-...- ....-+-+++.|..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCc
Confidence 8877654 4443344433 1 234544433 5555655554330 22355778999765
Q ss_pred eEEEEecCCCCCcc
Q psy5792 357 KMQLKLSSNIKNAL 370 (377)
Q Consensus 357 ~~~~~~~~~~~~p~ 370 (377)
-+.+.....+++|+
T Consensus 481 M~lv~D~P~~~EPH 494 (638)
T 3sbq_A 481 MKLVHDGPTFAEPH 494 (638)
T ss_dssp CEEEEEEEESSCCC
T ss_pred eEEEecCCCCCCCc
Confidence 55555555677774
No 321
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=49.51 E-value=34 Score=31.75 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=51.6
Q ss_pred CeEEEEeCCCC--cEEEEEcCCc--EEEEEeC----CCCCceE-EEEE-ECCeEEEEcCCCCceEEEcCCCCceEEEe
Q psy5792 28 PFVYGVKTLSH--SLHYVNIEVK--VAKVVSM----PDAAQVV-AAVF-YKGRIIYSDANDGNIRSINLDGSNSTVLR 95 (377)
Q Consensus 28 ~~ly~~d~~~~--~I~~~~~dG~--~~~i~~~----~~~~~p~-~lav-~~~~ly~td~~~~~I~~~~~~g~~~~~~~ 95 (377)
..||..+.... .|..+|++-. .+++.-+ .+...++ ++-+ ..+.||+++....+|..++..|+....+.
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGEIIRNYN 117 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTTCCEEEEEE
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCCceEEEEEe
Confidence 47888888888 9999999888 5566422 1233453 4555 89999999998899999999998876654
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=42.28 E-value=2.8e+02 Score=27.78 Aligned_cols=182 Identities=12% Similarity=0.032 Sum_probs=96.6
Q ss_pred cEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC-CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecccc
Q psy5792 150 DFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS-KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYVET 228 (377)
Q Consensus 150 ~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~ 228 (377)
..|.++...+ +.+++...... .. +.. ....+..+..+ ++.||+... +.+++++......+.+.. ...
T Consensus 74 g~lWigT~~G--l~~yd~~~~~f--~~---~~~~~~~~i~~i~~~--~g~lWigt~--~Gl~~~~~~~~~~~~~~~-~~~ 141 (758)
T 3ott_A 74 TYLYMGTDNG--ILVYNYRADRY--EQ---PETDFPTDVRTMALQ--GDTLWLGAL--NGLYTYQLQSRKLTSFDT-RRN 141 (758)
T ss_dssp TEEEEEETTE--EEEEETTTTEE--CC---CSCCCCSCEEEEEEE--TTEEEEEET--TEEEEEETTTCCEEEECH-HHH
T ss_pred CcEEEEeCCC--eEEEeCCCCEE--EC---cccCCCceEEEEEec--CCcEEEEcC--CcceeEeCCCCeEEEecc-CCC
Confidence 4677777666 88887654311 11 111 11234445433 688888764 378888876533333311 000
Q ss_pred CCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCC-----CCCceeEEEcCCCCeEEEEecCCCCeE
Q psy5792 229 GDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGG-----VDQPSALAVDPESGYLFWSESGKIPLI 303 (377)
Q Consensus 229 ~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~-----~~~P~~iavdp~~g~lywtd~g~~~~I 303 (377)
. .....+..|+.|. .++||+... +-+.+.+......+.+.... -.....|..|..++.|++... ..+
T Consensus 142 ~--l~~~~i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~---~Gl 213 (758)
T 3ott_A 142 G--LPNNTIYSIIRTK-DNQIYVGTY--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE---GYL 213 (758)
T ss_dssp C--CSCSCEEEEEECT-TCCEEEEET--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE---EEE
T ss_pred C--cCCCeEEEEEEcC-CCCEEEEeC--CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC---CCC
Confidence 0 1123467888884 678877543 35888887665433322111 112567888875566777653 257
Q ss_pred EEEecCCCCeEEEEecCCCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCC
Q psy5792 304 ARAGLDGKKQTILAQEIIMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGG 355 (377)
Q Consensus 304 ~r~~ldG~~~~~l~~~~~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~ 355 (377)
.+.+......+.+....-.....|..| ..+.|++.-. +-+..++....
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWigT~---~Gl~~~~~~~~ 261 (758)
T 3ott_A 214 FQYFPSTGQIKQTEAFHNNSIKSLALD-GNGDLLAGTD---NGLYVYHNDTT 261 (758)
T ss_dssp EEEETTTTEEEEEEEEEEEEEEEEEEC-TTCCEEEEET---TEEEEECCTTS
T ss_pred eEEcCCCCeEEeccCCCCCeEEEEEEc-CCCCEEEEeC---CceeEEecCCC
Confidence 777765433222211101235667777 3566665433 35666666543
No 323
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=41.97 E-value=2.7e+02 Score=27.62 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=40.6
Q ss_pred CCeEEEEeCCCCcEEEEEc-CCcEEEEEeCCCC----------CceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEE
Q psy5792 27 GPFVYGVKTLSHSLHYVNI-EVKVAKVVSMPDA----------AQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTV 93 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~-dG~~~~i~~~~~~----------~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~ 93 (377)
+++||+... .+.|.-+|. +|+...-...... ....++++.+++||+... .+.|..+| .+|+.+-.
T Consensus 66 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-DGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-TSEEEEEETTTCCEEEE
T ss_pred CCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-CCEEEEEECCCCCEeee
Confidence 568888765 467888887 4553322211110 012456788999999863 46788888 77876433
No 324
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=40.83 E-value=2.8e+02 Score=27.46 Aligned_cols=119 Identities=20% Similarity=0.278 Sum_probs=70.1
Q ss_pred EEEEEcCCCCcEEEEeccccCCCCCCCCcc-eEEEeccCCeE--EEE-cC-----------CCCEEEEEEcCCCeEEEEe
Q psy5792 209 ISRTHRDGTGRENIIEYVETGDPTPVDQFT-DIAVDWIAQNI--YWS-DP-----------KENVIEVARLTGQYRYVLI 273 (377)
Q Consensus 209 I~~~~~~G~~~~~i~~~~~~~~~~~~~~p~-~iavD~~~~~l--Ywt-d~-----------~~~~I~~~~~~g~~~~~l~ 273 (377)
+..+.+||.....+.. .+.-... =.|.||.++.| .|. +. ..+.+.+.++||.-+..++
T Consensus 274 ~~vayLDG~~Ps~v~~-------rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv 346 (620)
T 2zuy_A 274 AGTAYLDGERPSLVMA-------RGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEII 346 (620)
T ss_dssp EEEECTTCC-CEEEEE-------ECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEE
T ss_pred eeEEecCCCCceEEEe-------cCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEE
Confidence 4456677775555554 3332222 23678777753 443 32 2367999999987766666
Q ss_pred eCCCCCceeEEEcCCCCeEEEEe-cCCCCeEEEEecCCC--CeEEEE-ecCCCCceEEEE-eCCCCEEEEEEe
Q psy5792 274 SGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGK--KQTILA-QEIIMPIKDITL-DRKNKRVYWCYS 341 (377)
Q Consensus 274 ~~~~~~P~~iavdp~~g~lywtd-~g~~~~I~r~~ldG~--~~~~l~-~~~~~~P~glal-D~~~~~LYw~d~ 341 (377)
-.. .++|. +|.+.|+- .+....+...++|.. +.+++. .++-..|.|.++ |..+++++|.-.
T Consensus 347 ~Gs------~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 347 YGA------MAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp ETT------EEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred Eee------eEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEec
Confidence 542 47885 66666653 444557888888875 334432 222234667654 777888888754
No 325
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=40.27 E-value=75 Score=31.51 Aligned_cols=51 Identities=18% Similarity=0.272 Sum_probs=42.3
Q ss_pred CCeEEEEcCCCCEEEEEEcCCCeEEEEeeC-CCCCceeEEEc--CCCCeEEEEe
Q psy5792 246 AQNIYWSDPKENVIEVARLTGQYRYVLISG-GVDQPSALAVD--PESGYLFWSE 296 (377)
Q Consensus 246 ~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavd--p~~g~lywtd 296 (377)
++.||+.|..+.||.|++++--.+..++.- +....+|+... |.++|+|-.-
T Consensus 142 GrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~ 195 (638)
T 3sbq_A 142 GKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANA 195 (638)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEE
T ss_pred eEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecc
Confidence 788999999999999999999877777663 46678898887 6788888764
No 326
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=40.19 E-value=2e+02 Score=29.25 Aligned_cols=125 Identities=6% Similarity=-0.003 Sum_probs=70.7
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee-C----------CCCCceeEEEcCC-CCeEEEEec----
Q psy5792 234 VDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS-G----------GVDQPSALAVDPE-SGYLFWSES---- 297 (377)
Q Consensus 234 ~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~-~----------~~~~P~~iavdp~-~g~lywtd~---- 297 (377)
-++..+|++|+.+.+++|+-...+.|++..-.|+.=+.+.. . ......+|++||. .+.||.+..
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Confidence 34688999998775555544444668887766764333322 1 2234688999995 467777653
Q ss_pred -CCCCeEEEEecCCCCeEEEEec-CC-----CCc--eEEEEeCCC-CEEEEEEeCCCCeEEEEEccCCceEEEE
Q psy5792 298 -GKIPLIARAGLDGKKQTILAQE-II-----MPI--KDITLDRKN-KRVYWCYSVGSNVLESMDYSGGSKMQLK 361 (377)
Q Consensus 298 -g~~~~I~r~~ldG~~~~~l~~~-~~-----~~P--~glalD~~~-~~LYw~d~~~~~~i~~~~~~G~~~~~~~ 361 (377)
+....|+|..=.|..=+.+... .+ ... ..|++++.+ +++|..-. ...|++ ..||+...+.+
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~--~~~l~~-S~DgG~TW~~~ 170 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR--TQGLWR-STDRAQTWSRM 170 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS--SSCEEE-ESSTTSSCEEC
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC--CCcEEE-ECCCCcCcccc
Confidence 1236777776445433332221 11 111 358998664 56666543 345554 36666555543
No 327
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=38.60 E-value=2.2e+02 Score=25.69 Aligned_cols=123 Identities=20% Similarity=0.148 Sum_probs=65.4
Q ss_pred ceEEEEEECCC-CEEEEEEcCCCcEEEEEcCCCCcEEEEeccccCCCCCC-CCcceEEEecc-CCeEEEEc---------
Q psy5792 186 LAAKVDFHAAE-DYIYWVDIDHGTISRTHRDGTGRENIIEYVETGDPTPV-DQFTDIAVDWI-AQNIYWSD--------- 253 (377)
Q Consensus 186 ~~~~l~~d~~~-~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~~~~~~~~~-~~p~~iavD~~-~~~lYwtd--------- 253 (377)
.+..+++++.+ +.||... .+.|++..-.|...+.+.. ..+... .....|++|+. .+.||..-
T Consensus 233 ~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~tW~~~~~----~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~ 306 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQN--HCGIYRMDRREGVWKRIGD----AMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPR 306 (394)
T ss_dssp CEEEEEECSSSTTEEEEEE--TTEEEEEETTTTEEECGGG----GSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTC
T ss_pred ceeEEEECCCCCCEEEEEc--CCeEEEeCCCCCcceECCC----CCCCCCccceEEEEECCCCCCEEEEEeccCCcccee
Confidence 46788888753 7788765 3568877655543332211 000100 11346888864 45677752
Q ss_pred ---CCCCEEEEEEcCCCeEEEEeeCCCCCc--------eeEEEcCCC-CeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy5792 254 ---PKENVIEVARLTGQYRYVLISGGVDQP--------SALAVDPES-GYLFWSESGKIPLIARAGLDGKKQTILA 317 (377)
Q Consensus 254 ---~~~~~I~~~~~~g~~~~~l~~~~~~~P--------~~iavdp~~-g~lywtd~g~~~~I~r~~ldG~~~~~l~ 317 (377)
.....|++..-.|..=+.+. .++..+ .+|++||.+ +.||+.. ....|++..-.|..=+.+.
T Consensus 307 ~~~~~~~~~~~S~DgG~tW~~~~-~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~--~~g~l~~S~D~G~tW~~~~ 379 (394)
T 3b7f_A 307 VSPGGKPAVYVTRDAGESWQRQD-RGLPTDQAWLTVKRQAMTADAHAPVGVYFGT--TGGEIWASADEGEHWQCIA 379 (394)
T ss_dssp CBCCSSCCEEEESSTTSCCEEEC-BTSCCSSCCCCCCTBSEEECCSSSCCEEEEC--TTSCEEEESSTTSBCEEEE
T ss_pred ecCCCceeEEEECCCCCCceECC-CCCCCccccceEEEEEEEECCCCCCEEEEEe--CCCeEEEECCCCCCceEcc
Confidence 11235666544444323332 233321 469999865 4577753 2356887765565444433
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=36.39 E-value=3.4e+02 Score=27.11 Aligned_cols=177 Identities=10% Similarity=0.033 Sum_probs=94.1
Q ss_pred CcEEEEEeCCCCeEEEEEcCCCCceeeEEEEecC--CCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcEEEEecc
Q psy5792 149 SDFILFSVNSGYDIMGIKYNKNESKVTQVLGPLS--KVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRENIIEYV 226 (377)
Q Consensus 149 ~~~l~~s~~~~~~I~~~~l~~~~~~~~~~~~~~~--~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~~i~~~~ 226 (377)
+.+|.++...+ +.+++ +... ....... ....+..+..|. .+.||+.. .+.+++.+.... .+...
T Consensus 32 ~G~lWigT~~G--L~ryD--G~~~---~~~~~~~~~~~~~i~~i~~d~-~g~lWigT--~~Gl~~yd~~~~---~f~~~- 97 (758)
T 3ott_A 32 EGLIWIGSNKG--LFSYD--GYST---QQHFTYGENNNTRIYCGVIID-NTYLYMGT--DNGILVYNYRAD---RYEQP- 97 (758)
T ss_dssp TSCEEEEESSC--EEEEC--SSCE---EECSCTTSTTSSCEEEEEEET-TTEEEEEE--TTEEEEEETTTT---EECCC-
T ss_pred CCCEEEEECCC--ccccC--CCce---EEEEccCCCCCceEEEEEEcC-CCcEEEEe--CCCeEEEeCCCC---EEECc-
Confidence 45788888777 88875 3221 1111111 123467777775 67888875 346888877532 12110
Q ss_pred ccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEee--CC--CCCceeEEEcCCCCeEEEEecCCCCe
Q psy5792 227 ETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLIS--GG--VDQPSALAVDPESGYLFWSESGKIPL 302 (377)
Q Consensus 227 ~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~--~~--~~~P~~iavdp~~g~lywtd~g~~~~ 302 (377)
.. .....+..|+.+ .++||+.... .+.+.+......+.+.. .. ......|+.|. .|.|++... ..
T Consensus 98 ~~---~~~~~i~~i~~~--~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~---~G 166 (758)
T 3ott_A 98 ET---DFPTDVRTMALQ--GDTLWLGALN--GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTK-DNQIYVGTY---NG 166 (758)
T ss_dssp SC---CCCSCEEEEEEE--TTEEEEEETT--EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECT-TCCEEEEET---TE
T ss_pred cc---CCCceEEEEEec--CCcEEEEcCC--cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcC-CCCEEEEeC---CC
Confidence 00 111234555543 6888876543 68888876544333311 11 23457888885 788888753 36
Q ss_pred EEEEecCCCCeEEEEecC-----CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEcc
Q psy5792 303 IARAGLDGKKQTILAQEI-----IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYS 353 (377)
Q Consensus 303 I~r~~ldG~~~~~l~~~~-----~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~ 353 (377)
|.+.+......+.+.... -.....|..|..++.||+.-. +.+.+++..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~---~Gl~~~~~~ 219 (758)
T 3ott_A 167 LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE---GYLFQYFPS 219 (758)
T ss_dssp EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE---EEEEEEETT
T ss_pred HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC---CCCeEEcCC
Confidence 777766543322221110 012456777755555555433 245555554
No 329
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=36.14 E-value=11 Score=26.80 Aligned_cols=28 Identities=4% Similarity=-0.186 Sum_probs=21.4
Q ss_pred CCC-cCCCCCCcee-ccccCCCccc---cCCcC
Q psy5792 116 GIK-YNKNESKVQQ-VLGPLSKVSL---AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~~g~Cs~-~C~~~~~~~~---~~G~~ 143 (377)
.++ |..++..|.+ .|++.+++|. +.||.
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~ 34 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYE 34 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEE
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcC
Confidence 356 8877778876 8999999887 66663
No 330
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=36.00 E-value=3.3e+02 Score=26.85 Aligned_cols=132 Identities=10% Similarity=0.097 Sum_probs=78.7
Q ss_pred EEEEEeCCCCeEEEEEcCCCCc-ee-eEEEEec-----CCCCceEEEEEECCCCEEEEEEcCCCcEEEEEcCCCCcE---
Q psy5792 151 FILFSVNSGYDIMGIKYNKNES-KV-TQVLGPL-----SKVSLAAKVDFHAAEDYIYWVDIDHGTISRTHRDGTGRE--- 220 (377)
Q Consensus 151 ~l~~s~~~~~~I~~~~l~~~~~-~~-~~~~~~~-----~~~~~~~~l~~d~~~~~ly~sd~~~~~I~~~~~~G~~~~--- 220 (377)
.++++.+..|.|+-.++.+... +. ...+..+ .....+..+++.+.+ ..+-..++.|+..++++....
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccce
Confidence 3444444455788888876531 00 0011121 123468899999743 556566789999998875532
Q ss_pred -EEEeccccCCCCCCCCcceEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEEeeCCCCCceeEEE--cCCCCeEEEEe
Q psy5792 221 -NIIEYVETGDPTPVDQFTDIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVLISGGVDQPSALAV--DPESGYLFWSE 296 (377)
Q Consensus 221 -~i~~~~~~~~~~~~~~p~~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iav--dp~~g~lywtd 296 (377)
.+.. ..-..+.++++- ++.|--+ . .++|..-++.+....++..+......++++ .|....|-.+.
T Consensus 219 ~tL~~-------~h~~~V~svaFs--g~~LASa-~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 219 RMIQN-------ASRRKITDLKIV--DYKVVLT-C-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp EEEEC-------CCSSCCCCEEEE--TTEEEEE-C-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred eeecc-------cccCcEEEEEEE--CCEEEEE-e-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 2322 122357778875 4555444 3 479999999988775555445666788999 76443444444
No 331
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=34.27 E-value=20 Score=25.38 Aligned_cols=27 Identities=7% Similarity=-0.079 Sum_probs=20.3
Q ss_pred CC-cCCCCCCc-eeccccCCCccc---cCCcC
Q psy5792 117 IK-YNKNESKV-QQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 117 ~~-C~~~~g~C-s~~C~~~~~~~~---~~G~~ 143 (377)
.+ |..++..| .+.|++.+++|. +.||.
T Consensus 3 ideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~ 34 (87)
T 1z6c_A 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYR 34 (87)
T ss_dssp SCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCE
T ss_pred cccccCCCCCCCCCEeECCCCCEEEECCCCce
Confidence 56 87777778 568999998887 66664
No 332
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=34.22 E-value=12 Score=29.62 Aligned_cols=28 Identities=11% Similarity=-0.034 Sum_probs=21.8
Q ss_pred CCC-cCCCCCCceecc-ccCCCccc---cCCcC
Q psy5792 116 GIK-YNKNESKVQQVL-GPLSKVSL---AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~~g~Cs~~C-~~~~~~~~---~~G~~ 143 (377)
..+ |..++++|+|.| ++.++++. +.||.
T Consensus 84 ~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 84 LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYR 116 (146)
T ss_dssp EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEE
T ss_pred CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcE
Confidence 346 887788999999 99988887 56653
No 333
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=32.97 E-value=1.4e+02 Score=27.04 Aligned_cols=50 Identities=12% Similarity=0.057 Sum_probs=37.1
Q ss_pred CCeEEEEeCCCCcEEEEEcCCc--EEEEEeCCCCCceEE-----EEEECCeEEEEcCC
Q psy5792 27 GPFVYGVKTLSHSLHYVNIEVK--VAKVVSMPDAAQVVA-----AVFYKGRIIYSDAN 77 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~dG~--~~~i~~~~~~~~p~~-----lav~~~~ly~td~~ 77 (377)
+++||-+|.++|-|+.+. +++ ...|++.+......| ++|.++.||+....
T Consensus 104 ngkLyt~DDRTGiVyei~-~~~~iPwvIL~dGdG~~~kGfK~EWaTVKd~~LyVGs~G 160 (331)
T 1s1d_A 104 NGKLYSVDDRTGVVYQIE-GSKAVPWVILSDGDGTVEKGFKAEWLAVKDERLYVGGLG 160 (331)
T ss_dssp TTEEEEEETTTCEEEEEE-TTEEEEEEECEETTTTEEEECCCCEEEEETTEEEEECCC
T ss_pred CCEEeeeeCCCceEEEEe-CCcEEEEEEEecCCCCcCcccceeeEEEECCEEEEeecC
Confidence 579999999999999996 555 666654444444545 47799999999653
No 334
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=32.39 E-value=3.7e+02 Score=26.42 Aligned_cols=119 Identities=18% Similarity=0.268 Sum_probs=72.7
Q ss_pred EEEEEcCCCCcEEEEeccccCCCCCCC-CcceEEEeccCCeE--EEE-cC-----------CCCEEEEEEcCCCeEEEEe
Q psy5792 209 ISRTHRDGTGRENIIEYVETGDPTPVD-QFTDIAVDWIAQNI--YWS-DP-----------KENVIEVARLTGQYRYVLI 273 (377)
Q Consensus 209 I~~~~~~G~~~~~i~~~~~~~~~~~~~-~p~~iavD~~~~~l--Ywt-d~-----------~~~~I~~~~~~g~~~~~l~ 273 (377)
+-.+.+||.....+.. .+.- +-.=.|+|+.++.| -|. |. .++.+.+.++||.-+..++
T Consensus 270 ~~vayLDG~~Ps~v~~-------rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv 342 (591)
T 2zux_A 270 AGIAYLDGQRPSLIMT-------RGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEII 342 (591)
T ss_dssp EEEECTTSSSCEEEEE-------ECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEE
T ss_pred eeEEECCCCCceEEEe-------ccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEE
Confidence 3446678775555554 2222 22345778878865 553 22 2368999999988766666
Q ss_pred eCCCCCceeEEEcCCCCeEEEEe-cCCCCeEEEEecCCCC--eEEEE-ecCCCCceEEE-EeCCCCEEEEEEe
Q psy5792 274 SGGVDQPSALAVDPESGYLFWSE-SGKIPLIARAGLDGKK--QTILA-QEIIMPIKDIT-LDRKNKRVYWCYS 341 (377)
Q Consensus 274 ~~~~~~P~~iavdp~~g~lywtd-~g~~~~I~r~~ldG~~--~~~l~-~~~~~~P~gla-lD~~~~~LYw~d~ 341 (377)
-. +.++|- +|.+-|+- .+....+...++|... .+++. .+.-..|.|.+ .|..+++++|.-.
T Consensus 343 ~G------s~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 343 FG------SMAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp ET------TEEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred Ee------eeEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 54 237885 67776665 3445678888888764 34443 22223455654 4667888888754
No 335
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=29.48 E-value=4.3e+02 Score=26.24 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=42.3
Q ss_pred cccccCCCCeEEEEeCCCCcEEEEEc-CCc-EEEEEeCC-C----CCceEEEEEECCeEEEEcCC-----CCceEEEc-C
Q psy5792 20 STLKPQSGPFVYGVKTLSHSLHYVNI-EVK-VAKVVSMP-D----AAQVVAAVFYKGRIIYSDAN-----DGNIRSIN-L 86 (377)
Q Consensus 20 ~~~~d~~~~~ly~~d~~~~~I~~~~~-dG~-~~~i~~~~-~----~~~p~~lav~~~~ly~td~~-----~~~I~~~~-~ 86 (377)
+++++ +++||+.. ..+.|.-+|. +|+ +-..- .. . .....+-.+.++.||+.... .+.|..+| .
T Consensus 116 ~~~~~--~g~v~v~~-~dg~l~AlDa~TG~~~W~~~-~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~ 191 (689)
T 1yiq_A 116 GVAVW--KGKVYVGV-LDGRLEAIDAKTGQRAWSVD-TRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE 191 (689)
T ss_dssp CCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEE-CCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT
T ss_pred ccEEE--CCEEEEEc-cCCEEEEEECCCCCEeeeec-CcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECC
Confidence 34443 56888774 4578999998 465 33332 11 1 11111224579999997543 46788889 7
Q ss_pred CCCceEEE
Q psy5792 87 DGSNSTVL 94 (377)
Q Consensus 87 ~g~~~~~~ 94 (377)
+|+.+=.+
T Consensus 192 tG~~~W~~ 199 (689)
T 1yiq_A 192 TGKEAWRF 199 (689)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEe
Confidence 88775443
No 336
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=28.90 E-value=13 Score=29.29 Aligned_cols=28 Identities=4% Similarity=-0.115 Sum_probs=23.3
Q ss_pred CCC-cCCCCCCcee-ccccCCCccc---cCCcC
Q psy5792 116 GIK-YNKNESKVQQ-VLGPLSKVSL---AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~~g~Cs~-~C~~~~~~~~---~~G~~ 143 (377)
.++ |..+++.|++ .|++.+++|. +.||.
T Consensus 106 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~ 138 (147)
T 2w86_A 106 DIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMT 138 (147)
T ss_dssp ECCHHHHSTTCSSSSEEEEETTEEEEECCTTCC
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCCc
Confidence 577 8888888987 8999999988 77775
No 337
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=28.75 E-value=4.3e+02 Score=25.93 Aligned_cols=64 Identities=13% Similarity=0.167 Sum_probs=42.0
Q ss_pred CCeEEEEeCCCCcEEEEEc--CCcEEEEEeCCCC----------CceEEEEE--ECCe----EEEEcCCCCceEEEc-CC
Q psy5792 27 GPFVYGVKTLSHSLHYVNI--EVKVAKVVSMPDA----------AQVVAAVF--YKGR----IIYSDANDGNIRSIN-LD 87 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~--dG~~~~i~~~~~~----------~~p~~lav--~~~~----ly~td~~~~~I~~~~-~~ 87 (377)
+++||+.....+.|.-+|. +|+...-...... ....++++ .++. ||+... .+.|..+| .+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECCC
Confidence 5689998764678999998 6663322211111 11246778 7888 999864 46788899 78
Q ss_pred CCce
Q psy5792 88 GSNS 91 (377)
Q Consensus 88 g~~~ 91 (377)
|+..
T Consensus 141 G~~~ 144 (599)
T 1w6s_A 141 GETV 144 (599)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 8764
No 338
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=28.27 E-value=36 Score=23.18 Aligned_cols=28 Identities=11% Similarity=-0.168 Sum_probs=20.8
Q ss_pred CCC-cCCCCCCce--eccccCCCccc----cCCcC
Q psy5792 116 GIK-YNKNESKVQ--QVLGPLSKVSL----AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~~g~Cs--~~C~~~~~~~~----~~G~~ 143 (377)
+++ |......|. +.|++++++|. ..||.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVI 36 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccc
Confidence 356 877677884 58999999988 34655
No 339
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=28.13 E-value=3e+02 Score=25.28 Aligned_cols=156 Identities=10% Similarity=0.026 Sum_probs=90.0
Q ss_pred CEEEEEEcCCC--cEEEEEcCCCCcE-EEEeccccCCCCCCCCcc-eEEEeccCCeEEEEcCCCCEEEEEEcCCCeEEEE
Q psy5792 197 DYIYWVDIDHG--TISRTHRDGTGRE-NIIEYVETGDPTPVDQFT-DIAVDWIAQNIYWSDPKENVIEVARLTGQYRYVL 272 (377)
Q Consensus 197 ~~ly~sd~~~~--~I~~~~~~G~~~~-~i~~~~~~~~~~~~~~p~-~iavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l 272 (377)
..||.-+.... .|..++++-.... .+. .+..++.+++.+. ++-+- ..+.||+++....+|..++..|.....+
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~--~ekEGPNgi~~~~~~~~i~-~~DsI~i~~~~~~~i~l~n~~G~~~~k~ 116 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIP--LHKTGPNGLPAVFGSRPSP-DSQYILVAQNNISRLSSINSQGEIIRNY 116 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEE--CBSSSTTBCTTCCCEEESS-STTSEEEEEGGGTEEEEECTTCCEEEEE
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeec--cccCCCCCcccceeeEEec-CCCEEEEEeCCcceEEEECCCceEEEEE
Confidence 47777787777 9999999854322 232 2334557777774 45443 4788999988888999999999876654
Q ss_pred eeCCCCCceeEEEc---C--------CCCeEEEEec-----------CCCCeEEEEecCCCCeEEEEe--c-----C---
Q psy5792 273 ISGGVDQPSALAVD---P--------ESGYLFWSES-----------GKIPLIARAGLDGKKQTILAQ--E-----I--- 320 (377)
Q Consensus 273 ~~~~~~~P~~iavd---p--------~~g~lywtd~-----------g~~~~I~r~~ldG~~~~~l~~--~-----~--- 320 (377)
--.... .+++.- . .++.||++.. ...+.+..+++.-.....+.- . +
T Consensus 117 ~~~~~~--~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~~~~~l~l~yP~~~~~~~~~ 194 (369)
T 3s9j_A 117 NFQTPE--GRFTPLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTGEVKWIPIFYPPIFKEEYDN 194 (369)
T ss_dssp ECCCTT--SCCCCCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTCCEEEEEEECCSCCCCCCSS
T ss_pred ecCCCc--cccccccccccccCcceecCceEEEeccccccccchhhhccCceEEEEECCCCcEEEeeccCCccccccccc
Confidence 221111 122200 0 1345777532 122345556666444442221 1 0
Q ss_pred --CCCceEEEEeCCCCEEEEEEeCCCCeEEEEEccCCceEE
Q psy5792 321 --IMPIKDITLDRKNKRVYWCYSVGSNVLESMDYSGGSKMQ 359 (377)
Q Consensus 321 --~~~P~glalD~~~~~LYw~d~~~~~~i~~~~~~G~~~~~ 359 (377)
...-........+++++.+=. ..+.|+..+ +-...+.
T Consensus 195 ~~~~~~~~~s~~~~~~~~Iis~~-~~dsIyv~~-~~~~~~~ 233 (369)
T 3s9j_A 195 IAGGYGFSYDYNYKESRLVCGFF-GYDSLMVTD-DLKHIRW 233 (369)
T ss_dssp EEECCCEEEEEETTTTEEEEEET-TCSEEEEES-SSSCEEE
T ss_pred ccCCccceeEEEEECCEEEEEec-cCCeEEEEc-Cccceee
Confidence 001134555656788888887 788887776 4344443
No 340
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=27.83 E-value=25 Score=31.52 Aligned_cols=28 Identities=11% Similarity=-0.025 Sum_probs=22.3
Q ss_pred CCC-cCCC-CCCceeccccCCCccc---cCCcC
Q psy5792 116 GIK-YNKN-ESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~-~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
..+ |..+ +++|.|.|++..+++. +.||.
T Consensus 42 ~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~ 74 (317)
T 3h5c_B 42 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYR 74 (317)
T ss_dssp CSSSCCTTCTTSCSSEEECCSSSCEEECCTTEE
T ss_pred CcccCCCCCCCCCcCccccCCCeeEEecccccc
Confidence 566 7663 4899999999999988 67775
No 341
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=27.52 E-value=19 Score=28.60 Aligned_cols=28 Identities=4% Similarity=-0.057 Sum_probs=20.5
Q ss_pred CCC-cCCC-CCCceeccccCCCccc---cCCcC
Q psy5792 116 GIK-YNKN-ESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 116 ~~~-C~~~-~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
..+ |... ...|+|.|.+.++++. ..||.
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTCE
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCcE
Confidence 456 8764 5789999999988876 55664
No 342
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=26.67 E-value=4.8e+02 Score=25.88 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=40.7
Q ss_pred CCeEEEEeCCCCcEEEEEc-CCcEEEEEeCCCC----------CceEEEEEECCeEEEEcCCCCceEEEc-CCCCceEE
Q psy5792 27 GPFVYGVKTLSHSLHYVNI-EVKVAKVVSMPDA----------AQVVAAVFYKGRIIYSDANDGNIRSIN-LDGSNSTV 93 (377)
Q Consensus 27 ~~~ly~~d~~~~~I~~~~~-dG~~~~i~~~~~~----------~~p~~lav~~~~ly~td~~~~~I~~~~-~~g~~~~~ 93 (377)
+++||+... .+.|.-+|. +|+...-...... ....++++.+++||+... .+.|..+| .+|+..-.
T Consensus 70 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-DGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-CCEEEEEECCCCCEeee
Confidence 568888754 467888997 4553332211110 012356789999999864 46788888 67876433
No 343
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=26.37 E-value=15 Score=29.50 Aligned_cols=29 Identities=7% Similarity=-0.259 Sum_probs=23.7
Q ss_pred cCCC-cCCCCCCcee-ccccCCCccc---cCCcC
Q psy5792 115 MGIK-YNKNESKVQQ-VLGPLSKVSL---AAKVD 143 (377)
Q Consensus 115 ~~~~-C~~~~g~Cs~-~C~~~~~~~~---~~G~~ 143 (377)
..++ |..++++|++ .|++++++|. +.||.
T Consensus 120 ~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~ 153 (162)
T 1uzk_A 120 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYY 153 (162)
T ss_dssp EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCC
T ss_pred CccccccCCCCCcCCCEeEcCCCCEEeeCCCCcc
Confidence 3577 8887788985 9999999988 77875
No 344
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=24.11 E-value=13 Score=31.20 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=21.8
Q ss_pred C-cCCCCCCceeccccCCCccc---cCCcC
Q psy5792 118 K-YNKNESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 118 ~-C~~~~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
+ |..++++|.|.|++..++|. +.||.
T Consensus 82 deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred ccccCCCCCCCCEeECCCCCeEEECCCCce
Confidence 6 88778899999999998887 66765
No 345
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=24.03 E-value=14 Score=28.80 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=20.9
Q ss_pred C-cCCCCCCceeccccCCCccc---cCCcC
Q psy5792 118 K-YNKNESKVQQVLGPLSKVSL---AAKVD 143 (377)
Q Consensus 118 ~-C~~~~g~Cs~~C~~~~~~~~---~~G~~ 143 (377)
+ |..++++|.+.|++.++++. +.||.
T Consensus 82 d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred CccccCCCCCCCEeECCCCCEEEECCCCcE
Confidence 6 87777899999999988876 56653
No 346
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=23.52 E-value=19 Score=28.25 Aligned_cols=25 Identities=4% Similarity=-0.094 Sum_probs=18.8
Q ss_pred cCCCCCCceeccccCCC-ccc---cCCcC
Q psy5792 119 YNKNESKVQQVLGPLSK-VSL---AAKVD 143 (377)
Q Consensus 119 C~~~~g~Cs~~C~~~~~-~~~---~~G~~ 143 (377)
|...+++|+|.|++..+ ++. +.||.
T Consensus 91 c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 91 CVNENGGCEQYCSDHTGTKRSCRCHEGYS 119 (142)
T ss_dssp TTTGGGGCSSEEECCTTSCCEEECCTTEE
T ss_pred ccCCCCCccCEeECCCCCCEEEECCCCce
Confidence 33457899999999998 776 66654
No 347
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=23.17 E-value=43 Score=23.28 Aligned_cols=26 Identities=0% Similarity=-0.176 Sum_probs=19.6
Q ss_pred CCC-cCCCCCCcee-ccccCCCccc---cCCc
Q psy5792 116 GIK-YNKNESKVQQ-VLGPLSKVSL---AAKV 142 (377)
Q Consensus 116 ~~~-C~~~~g~Cs~-~C~~~~~~~~---~~G~ 142 (377)
..+ |.. +.+|.| .|++.++++. +.||
T Consensus 4 dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy 34 (82)
T 1emn_A 4 DMDECKE-PDVCKHGQCINTDGSYRCECPFGY 34 (82)
T ss_dssp CCCSSSS-TTSCSSSEECCCSSCCCEECCTTE
T ss_pred ccccCCC-CCCcCCCEEEecCCCEEEECCCCe
Confidence 456 776 567876 8999999887 6776
No 348
>2nx7_A Nematocyst outer WALL antigen; cysteine rich, disulfide bonds, rich in turns, structural protein; NMR {Hydra vulgaris}
Probab=20.67 E-value=15 Score=19.43 Aligned_cols=14 Identities=7% Similarity=0.171 Sum_probs=10.5
Q ss_pred cCCCCCCceecccc
Q psy5792 119 YNKNESKVQQVLGP 132 (377)
Q Consensus 119 C~~~~g~Cs~~C~~ 132 (377)
|...+.+||..|.+
T Consensus 5 cslqqpgcssacap 18 (28)
T 2nx7_A 5 CSLQQPGCSSACAP 18 (28)
T ss_dssp HHHHSTTCCGGGTT
T ss_pred ccccCCCccccccc
Confidence 66667788888875
Done!