BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5794
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55326|YZG1_CAEEL Uncharacterized protein F13E6.1 OS=Caenorhabditis elegans
GN=F13E6.1 PE=3 SV=2
Length = 195
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 99 ELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
EL + EEEI+TLK VL+++ K A +LK+KLG T + E + D+ +S+K V +T
Sbjct: 67 ELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDT 118
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 48
EEEI+TLK VL+++ K A +LK+KLG T + E + D+ +S+K V +T
Sbjct: 71 TEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDT 118
>sp|Q96J77|TPD55_HUMAN Tumor protein D55 OS=Homo sapiens GN=TPD52L3 PE=1 SV=2
Length = 140
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 79 NDLQNLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFND 138
++L++L+ EQ + K + L ++E EI TL+HVLA+K + +LK+KLG T
Sbjct: 19 SELEDLTEPEQRELKTK----LTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQ 74
Query: 139 DLTQS 143
+L++S
Sbjct: 75 NLSKS 79
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHI 55
+E EI TL+HVLA+K + +LK+KLG T +L++S +V QV + ++
Sbjct: 39 LEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSKSWLDV---QVSNTYV 90
>sp|Q62393|TPD52_MOUSE Tumor protein D52 OS=Mus musculus GN=Tpd52 PE=1 SV=2
Length = 224
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
+VEEEI TL VLA+K K +LK+KLG + +EF ++ + ++V T
Sbjct: 84 KVEEEIQTLSQVLAAKEKHLAELKRKLGISSLQEFKQNIAKGWQDVTAT 132
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 48
VEEEI TL VLA+K K +LK+KLG + +EF ++ + ++V T
Sbjct: 85 VEEEIQTLSQVLAAKEKHLAELKRKLGISSLQEFKQNIAKGWQDVTAT 132
>sp|Q9CYZ2|TPD54_MOUSE Tumor protein D54 OS=Mus musculus GN=Tpd52l2 PE=1 SV=1
Length = 220
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVK 148
+VEEEI TL+ VLA+K + +LK++LG + E +L++S +V+
Sbjct: 55 KVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQ 101
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVK 46
VEEEI TL+ VLA+K + +LK++LG + E +L++S +V+
Sbjct: 56 VEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQ 101
>sp|Q6PCT3|TPD54_RAT Tumor protein D54 OS=Rattus norvegicus GN=Tpd52l2 PE=2 SV=1
Length = 220
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
+VEEEI TL+ VLA+K + +LK++LG + E +L++S +V+ +
Sbjct: 55 KVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQGS 103
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 48
VEEEI TL+ VLA+K + +LK++LG + E +L++S +V+ +
Sbjct: 56 VEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQGS 103
>sp|O43399|TPD54_HUMAN Tumor protein D54 OS=Homo sapiens GN=TPD52L2 PE=1 SV=2
Length = 206
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVK 148
+VEEEI TL+ VLA+K + +LK++LG + E +L++S +V+
Sbjct: 55 KVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQ 101
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHI 55
VEEEI TL+ VLA+K + +LK++LG + E +L++S +V QV ++
Sbjct: 56 VEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV---QVSSAYV 107
>sp|P55327|TPD52_HUMAN Tumor protein D52 OS=Homo sapiens GN=TPD52 PE=1 SV=2
Length = 224
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 101 ARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 152
A+VEEEI TL VLA+K K ++K+KLG +E ++ + ++V T
Sbjct: 84 AKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSA 135
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 50
VEEEI TL VLA+K K ++K+KLG +E ++ + ++V T
Sbjct: 86 VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSA 135
>sp|Q5RCT1|TPD54_PONAB Tumor protein D54 OS=Pongo abelii GN=TPD52L2 PE=2 SV=1
Length = 206
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVK 148
+VEEEI TL+ VLA+K + +LK++LG + +L++S +V+
Sbjct: 55 KVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGGLKQNLSRSWHDVQ 101
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQVRDIHI 55
VEEEI TL+ VLA+K + +LK++LG + +L++S +V QV + ++
Sbjct: 56 VEEEIVTLRQVLAAKERHCGELKRRLGLSTLGGLKQNLSRSWHDV---QVSNAYV 107
>sp|Q95212|TPD52_RABIT Tumor protein D52 OS=Oryctolagus cuniculus GN=TPD52 PE=2 SV=1
Length = 184
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 101 ARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 152
A+VEEEI TL VLA++ K ++K+KLG +E ++ + ++V T
Sbjct: 44 AKVEEEIQTLSQVLAAREKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSA 95
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 50
VEEEI TL VLA++ K ++K+KLG +E ++ + ++V T
Sbjct: 46 VEEEIQTLSQVLAAREKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSA 95
>sp|Q9I8F4|TPD53_CHICK Tumor protein D53 homolog OS=Gallus gallus GN=TPD52L1 PE=2 SV=1
Length = 210
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 3 EEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 50
+EI+TL+ VLA+K K ++K+KLG ++ E + ++S +++ T
Sbjct: 48 DEISTLRQVLAAKEKHLIEIKQKLGMSLMNELKQNFSKSWHDMQTTSA 95
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 105 EEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKETQV 152
+EI+TL+ VLA+K K ++K+KLG ++ E + ++S +++ T
Sbjct: 48 DEISTLRQVLAAKEKHLIEIKQKLGMSLMNELKQNFSKSWHDMQTTSA 95
>sp|Q5D013|MET10_DANRE Methyltransferase-like protein 10 OS=Danio rerio GN=mettl10 PE=2
SV=1
Length = 233
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 47 ETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEWTQELARV 103
E +++I+I + F+ P E D+ D G D +L+PE++E+ K + L V
Sbjct: 120 EEGLKNINIQVEDFLNPSTELKGFDVCIDKGTFDAISLNPEDREEAKKHYVTSLRAV 176
>sp|Q6FY25|SP110_CANGA Spindle pole body component 110 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPC110 PE=3 SV=1
Length = 872
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 88 EQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLG 129
E +++K E+ AR+ EEI+TLK + K T + K+KLG
Sbjct: 259 ELDEKKQEFESSTARLNEEIHTLKSTIDDKDATISEFKRKLG 300
>sp|O54818|TPD53_MOUSE Tumor protein D53 OS=Mus musculus GN=Tpd52l1 PE=2 SV=1
Length = 204
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
++E+EI TL+ VL++K + ++K+KLG + E + ++S +++ T
Sbjct: 45 QLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSRSWHDMQTT 93
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 48
+E+EI TL+ VL++K + ++K+KLG + E + ++S +++ T
Sbjct: 46 LEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSRSWHDMQTT 93
>sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2
Length = 469
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 45 VKETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEW----TQEL 100
+ E +R + I++ F IPG+E N+ D+G P E +Q A W T EL
Sbjct: 364 IAEALIRGLPIILNDF-IPGQEVGNVPYVVDNGAGVFSK-DPREAARQVARWFTTHTNEL 421
Query: 101 ARVEEEINTLK 111
R +N LK
Sbjct: 422 RRY--SLNALK 430
>sp|A2YTP9|MGDG2_ORYSI Probable monogalactosyldiacylglycerol synthase 2, chloroplastic
OS=Oryza sativa subsp. indica GN=MGD2 PE=3 SV=2
Length = 469
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 45 VKETQVRDIHIVILRFVIPGEEANNLDLSPDSGINDLQNLSPEEQEKQKAEW----TQEL 100
+ E +R + I++ F IPG+E N+ D+G P E +Q A W T EL
Sbjct: 364 IAEALIRGLPIILNDF-IPGQEVGNVPYVVDNGAGVFSK-DPREAARQVARWFTTHTNEL 421
Query: 101 ARVEEEINTLK 111
R +N LK
Sbjct: 422 RRY--SLNALK 430
>sp|Q16890|TPD53_HUMAN Tumor protein D53 OS=Homo sapiens GN=TPD52L1 PE=1 SV=1
Length = 204
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 102 RVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 150
++E+EI TL+ VL++K + ++K+KLG + E + ++S +++ T
Sbjct: 45 QLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDMQTT 93
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 1 VEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQSIKNVKET 48
+E+EI TL+ VL++K + ++K+KLG + E + ++S +++ T
Sbjct: 46 LEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDMQTT 93
>sp|A1Z7T0|PKN_DROME Serine/threonine-protein kinase N OS=Drosophila melanogaster GN=Pkn
PE=1 SV=1
Length = 1190
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 63 PGEEANNLDLSPDSGIND 80
PGE+A NL+ PD+GIN+
Sbjct: 619 PGEQAQNLEFDPDAGINE 636
>sp|Q5R613|SNX6_PONAB Sorting nexin-6 OS=Pongo abelii GN=SNX6 PE=2 SV=1
Length = 406
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 83 NLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQ 142
+++ EE K K E E + ++ + V + L+K L F V+ E+N DL+
Sbjct: 116 SMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSV 175
Query: 143 SIKNVKE 149
KN KE
Sbjct: 176 RGKNKKE 182
>sp|Q6P8X1|SNX6_MOUSE Sorting nexin-6 OS=Mus musculus GN=Snx6 PE=1 SV=2
Length = 406
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 83 NLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQ 142
+++ EE K K E E + ++ + V + L+K L F V+ E+N DL+
Sbjct: 116 SMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSV 175
Query: 143 SIKNVKE 149
KN KE
Sbjct: 176 RGKNKKE 182
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein 1A OS=Xenopus laevis
GN=smc1a PE=1 SV=1
Length = 1232
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 82 QNLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFT---VWKEFND 138
++L+ QEK K E ELA IN +K ++ S+ + +DLK+K+ V++EF
Sbjct: 725 RHLAMNMQEKSKLE--SELANFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCR 782
Query: 139 DLTQSIKNVKE 149
++ ++N++E
Sbjct: 783 EI--GVRNIRE 791
>sp|Q9UNH7|SNX6_HUMAN Sorting nexin-6 OS=Homo sapiens GN=SNX6 PE=1 SV=1
Length = 406
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 83 NLSPEEQEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFTVWKEFNDDLTQ 142
+++ EE K K E E + ++ + V + L++ L F V+ E+N DL+
Sbjct: 116 SMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSV 175
Query: 143 SIKNVKE 149
KN KE
Sbjct: 176 RGKNKKE 182
>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein 1A OS=Homo sapiens
GN=SMC1A PE=1 SV=2
Length = 1233
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 89 QEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFT---VWKEFNDDLTQSIK 145
QEK K E ELA IN +K ++ S+ + +DLK+K+ V++EF ++ ++
Sbjct: 732 QEKSKLE--SELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREI--GVR 787
Query: 146 NVKE 149
N++E
Sbjct: 788 NIRE 791
>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein 1A OS=Bos taurus
GN=SMC1A PE=1 SV=1
Length = 1233
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 89 QEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFT---VWKEFNDDLTQSIK 145
QEK K E ELA IN +K ++ S+ + +DLK+K+ V++EF ++ ++
Sbjct: 732 QEKSKLE--SELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREI--GVR 787
Query: 146 NVKE 149
N++E
Sbjct: 788 NIRE 791
>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein 1A OS=Rattus
norvegicus GN=Smc1a PE=1 SV=1
Length = 1233
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 89 QEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFT---VWKEFNDDLTQSIK 145
QEK K E ELA IN +K ++ S+ + +DLK+K+ V++EF ++ ++
Sbjct: 732 QEKSKLE--SELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREI--GVR 787
Query: 146 NVKE 149
N++E
Sbjct: 788 NIRE 791
>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein 1A OS=Mus musculus
GN=Smc1a PE=1 SV=4
Length = 1233
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 89 QEKQKAEWTQELARVEEEINTLKHVLASKTKTAQDLKKKLGFT---VWKEFNDDLTQSIK 145
QEK K E ELA IN +K ++ S+ + +DLK+K+ V++EF ++ ++
Sbjct: 732 QEKSKLE--SELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREI--GVR 787
Query: 146 NVKE 149
N++E
Sbjct: 788 NIRE 791
>sp|Q02952|AKA12_HUMAN A-kinase anchor protein 12 OS=Homo sapiens GN=AKAP12 PE=1 SV=4
Length = 1782
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 85 SPEEQEKQKAEWTQELARVEEEINTLKHVL--------ASKTKTAQDLKKKLGFTVWKEF 136
SP+ QE+QK E + EEI L+ L A + T+ KK+ G T W F
Sbjct: 554 SPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATSDGEKKREGVTPWASF 613
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,042,359
Number of Sequences: 539616
Number of extensions: 2049164
Number of successful extensions: 9280
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 9083
Number of HSP's gapped (non-prelim): 354
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)