BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5801
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q23978|MY31D_DROME Myosin-IA OS=Drosophila melanogaster GN=Myo31DF PE=2 SV=1
Length = 1011
Score = 100 bits (248), Expect = 6e-21, Method: Composition-based stats.
Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 14/137 (10%)
Query: 46 QEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVT 105
QE +G GS + + H G +V+FS+FV K N FN+ A+RA +V+
Sbjct: 827 QENSGYEAYNGSIKNIRNHPADGETF--------QQVLFSSFVKKFNHFNKQANRAFIVS 878
Query: 106 DFAVYKLDS-GAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISS---- 160
D ++KLD KFK MKR + ++E+T +SVSPG DQL+V H++K DLVF++ S
Sbjct: 879 DSTIHKLDGIKNKFKDMKRTIKIRELTSISVSPGRDQLIVFHSSKNKDLVFSLESEYTPL 938
Query: 161 -EDRVGELVGALASRYY 176
EDR+GE+VG + +Y+
Sbjct: 939 KEDRIGEVVGIVCKKYH 955
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDS-GAKFKAMKRGMSLQEMTGLSVSPGSDQ 59
+FS+FV K N FN+ A+RA +V+D ++KLD KFK MKR + ++E+T +SVSPG DQ
Sbjct: 856 LFSSFVKKFNHFNKQANRAFIVSDSTIHKLDGIKNKFKDMKRTIKIRELTSISVSPGRDQ 915
Query: 60 LVVIHNNKGNDLVFTIISS-----EDRV 82
L+V H++K DLVF++ S EDR+
Sbjct: 916 LIVFHSSKNKDLVFSLESEYTPLKEDRI 943
>sp|Q5SUA5|MYO1G_MOUSE Unconventional myosin-Ig OS=Mus musculus GN=Myo1g PE=2 SV=1
Length = 1024
Score = 86.3 bits (212), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS+ V K N+F + DRALL+TD +YKL+ G +++ M R + L+ +TGLSV+ G DQ
Sbjct: 875 VLFSSHVRKVNRFRKSRDRALLLTDRYLYKLEPGRQYRVM-RAVPLEAVTGLSVTSGRDQ 933
Query: 142 LVVIHNNKGNDLVFTIISSE----DRVGELVGALAS 173
LVV+H +DLV + S+ +R+GELVG LA+
Sbjct: 934 LVVLHAQGYDDLVVCLHRSQPPLDNRIGELVGMLAA 969
Score = 73.2 bits (178), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS+ V K N+F + DRALL+TD +YKL+ G +++ M R + L+ +TGLSV+ G DQL
Sbjct: 876 LFSSHVRKVNRFRKSRDRALLLTDRYLYKLEPGRQYRVM-RAVPLEAVTGLSVTSGRDQL 934
Query: 61 VVIHNNKGNDLVFTIISSE 79
VV+H +DLV + S+
Sbjct: 935 VVLHAQGYDDLVVCLHRSQ 953
>sp|Q5SYD0|MYO1D_MOUSE Unconventional myosin-Id OS=Mus musculus GN=Myo1d PE=1 SV=1
Length = 1006
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915
Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
LVV H DL+ + S E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQL
Sbjct: 858 LFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQL 916
Query: 61 VVIHNNKGNDLVFTIISSE 79
VV H DL+ + S +
Sbjct: 917 VVFHTKDNKDLIVCLFSKQ 935
>sp|O94832|MYO1D_HUMAN Unconventional myosin-Id OS=Homo sapiens GN=MYO1D PE=1 SV=2
Length = 1006
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915
Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
LVV H DL+ + S E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQL
Sbjct: 858 LFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQL 916
Query: 61 VVIHNNKGNDLVFTIISSE 79
VV H DL+ + S +
Sbjct: 917 VVFHTKDNKDLIVCLFSKQ 935
>sp|Q63357|MYO1D_RAT Unconventional myosin-Id OS=Rattus norvegicus GN=Myo1d PE=1 SV=3
Length = 1006
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915
Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
LVV H DL+ + S E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQL
Sbjct: 858 LFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQL 916
Query: 61 VVIHNNKGNDLVFTIISSE 79
VV H DL+ + S +
Sbjct: 917 VVFHTKDNKDLIVCLFSKQ 935
>sp|Q17R14|MYO1D_BOVIN Unconventional myosin-Id OS=Bos taurus GN=MYO1D PE=2 SV=1
Length = 1006
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915
Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
LVV H DL+ + S E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS V K N+F++ DRA+ VTD +YK+D ++K MK + L +TGLSVS G DQL
Sbjct: 858 LFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQL 916
Query: 61 VVIHNNKGNDLVFTIISSE 79
VV H DL+ + S +
Sbjct: 917 VVFHTKDNKDLIVCLFSKQ 935
>sp|B0I1T2|MYO1G_HUMAN Unconventional myosin-Ig OS=Homo sapiens GN=MYO1G PE=1 SV=2
Length = 1018
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS+ V K N+F++ +RALL+TD +YKLD +++ M R + L+ +TGLSV+ G DQ
Sbjct: 869 VLFSSHVRKVNRFHKIRNRALLLTDQHLYKLDPDRQYRVM-RAVPLEAVTGLSVTSGGDQ 927
Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALAS 173
LVV+H +DLV + S ++RVGELVG LA+
Sbjct: 928 LVVLHARGQDDLVVCLHRSRPPLDNRVGELVGVLAA 963
Score = 70.5 bits (171), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS+ V K N+F++ +RALL+TD +YKLD +++ M R + L+ +TGLSV+ G DQL
Sbjct: 870 LFSSHVRKVNRFHKIRNRALLLTDQHLYKLDPDRQYRVM-RAVPLEAVTGLSVTSGGDQL 928
Query: 61 VVIHNNKGNDLV 72
VV+H +DLV
Sbjct: 929 VVLHARGQDDLV 940
>sp|Q5ZMC2|MYO1G_CHICK Unconventional myosin-Ig OS=Gallus gallus GN=MYO1G PE=2 SV=1
Length = 1007
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
V+FS+ V K N+FN+ DRA+L+TD +YKL+ +++ M R + L +TGLSV+ Q
Sbjct: 858 VLFSSHVRKINRFNKSRDRAILITDQHLYKLEPRKQYRVM-RELPLSMVTGLSVTSCRAQ 916
Query: 142 LVVIHNNKGNDLVFTIISSE----DRVGELVGAL 171
LVV H +DL + ++ +RVGELVG L
Sbjct: 917 LVVFHTQNHDDLAVCLHKTQPRGDERVGELVGVL 950
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+FS+ V K N+FN+ DRA+L+TD +YKL+ +++ M R + L +TGLSV+ QL
Sbjct: 859 LFSSHVRKINRFNKSRDRAILITDQHLYKLEPRKQYRVM-RELPLSMVTGLSVTSCRAQL 917
Query: 61 VVIHNNKGNDLVFTIISSEDR 81
VV H +DL + ++ R
Sbjct: 918 VVFHTQNHDDLAVCLHKTQPR 938
>sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2
Length = 1147
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 NKFNRCADRALLVTDFAVY----KLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHN 147
N+ + R L+VT+ AVY K SG +KR + L E+ LS+S D VVIH+
Sbjct: 763 NRRGKPERRDLIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDNYVVIHH 822
Query: 148 NKGNDLVFTIISSEDRVGELVGALASRY 175
N+ D+VF D+ E+V L Y
Sbjct: 823 NQ-YDMVF----ENDKKTEIVTILMENY 845
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 10 NKFNRCADRALLVTDFAVY----KLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHN 65
N+ + R L+VT+ AVY K SG +KR + L E+ LS+S D VVIH+
Sbjct: 763 NRRGKPERRDLIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDNYVVIHH 822
Query: 66 NKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAK 117
N+ D+VF ++ + + + K + D + D YK +GA+
Sbjct: 823 NQ-YDMVF---ENDKKTEIVTILMENYKMSGGRDLPVNFNDNITYKASNGAQ 870
>sp|P54695|MYOF_DICDI Myosin IF heavy chain OS=Dictyostelium discoideum GN=myoF PE=4 SV=2
Length = 1071
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 79 EDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG 138
+ ++F+ V K NK + R+L++TD +YK D+ K+ K G+ L + LS S
Sbjct: 910 DKEILFADNVIKINKRGKSQLRSLIITDQHIYKYDT-KKYTQKKVGLKLHSIVALSTSNK 968
Query: 139 SDQLVVIH 146
D + IH
Sbjct: 969 KDTFLAIH 976
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+F+ V K NK + R+L++TD +YK D+ K+ K G+ L + LS S D
Sbjct: 914 LFADNVIKINKRGKSQLRSLIITDQHIYKYDT-KKYTQKKVGLKLHSIVALSTSNKKDTF 972
Query: 61 VVIH 64
+ IH
Sbjct: 973 LAIH 976
>sp|P34109|MYOD_DICDI Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2
Length = 1109
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 77 SSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVY---------KLDSGAK--FKAMKRGM 125
+ +++MF+ V+K ++ +RC R LL++D A+Y K D + KR +
Sbjct: 756 NGNEKIMFTHAVNKYDRRSRCQRRVLLLSDTAIYFIATEKNKDKEDRKKRPWIYVQKRRL 815
Query: 126 SLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGA 170
L +T + +S SD VV+ +D +F + +G L+ A
Sbjct: 816 LLAGITSVELSKLSDGFVVLKTMNEHDQIFECRRKTEFLGTLIKA 860
Score = 35.0 bits (79), Expect = 0.25, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVY---------KLDSGAK--FKAMKRGMSLQEMT 49
MF+ V+K ++ +RC R LL++D A+Y K D + KR + L +T
Sbjct: 762 MFTHAVNKYDRRSRCQRRVLLLSDTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGIT 821
Query: 50 GLSVSPGSDQLVVIHNNKGNDLVF 73
+ +S SD VV+ +D +F
Sbjct: 822 SVELSKLSDGFVVLKTMNEHDQIF 845
>sp|Q03479|MYOE_DICDI Myosin IE heavy chain OS=Dictyostelium discoideum GN=myoE PE=1 SV=2
Length = 1005
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 79 EDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG 138
+ V+F+ +V K N R ++VT +YK D +K K G L ++T +S+SP
Sbjct: 848 DTEVLFADYVIKVNPKGVPQRRGIVVTGTNIYKHDP-KNYKVKKWGTPLVDVTSISISPM 906
Query: 139 SDQLVVIH 146
+D +V+H
Sbjct: 907 ADTFLVLH 914
Score = 38.1 bits (87), Expect = 0.031, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQL 60
+F+ +V K N R ++VT +YK D +K K G L ++T +S+SP +D
Sbjct: 852 LFADYVIKVNPKGVPQRRGIVVTGTNIYKHDP-KNYKVKKWGTPLVDVTSISISPMADTF 910
Query: 61 VVIH 64
+V+H
Sbjct: 911 LVLH 914
>sp|P42522|MYOC_DICDI Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=4 SV=2
Length = 1182
Score = 37.4 bits (85), Expect = 0.045, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 51 LSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVY 110
L V S L + + D++F SS+ +VM VH N+ + R L+VT A+Y
Sbjct: 790 LDVRSQSYFLDAMAEGRNEDVIF---SSKSQVM----VHPILSANKLSPRFLIVTKQAIY 842
Query: 111 --KLDSGAKFKA--MKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFT 156
KL + R + L E+T S+S +D L+VIH + D+ T
Sbjct: 843 LIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLLVIHTSTQFDVAVT 892
Score = 34.3 bits (77), Expect = 0.48, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 6 VHKTNKFNRCADRALLVTDFAVY--KLDSGAKFKA--MKRGMSLQEMTGLSVSPGSDQLV 61
VH N+ + R L+VT A+Y KL + R + L E+T S+S +D L+
Sbjct: 820 VHPILSANKLSPRFLIVTKQAIYLIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLL 879
Query: 62 VIHNNKGNDLVFTIISSEDRVMFSAFVHK 90
VIH + D+ +++E + A ++K
Sbjct: 880 VIHTSTQFDVA---VTTEFKTELVALINK 905
>sp|P34092|MYOB_DICDI Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2
Length = 1111
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 79 EDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMK----RGMSLQEMTGLS 134
++RV+F+ V K ++ + + +++TD A+Y ++ K K + R + L+E+ G+S
Sbjct: 763 KERVVFADTVIKIDRRAKQKNYEMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVS 822
Query: 135 VSPGSDQLVVIH---------NNKGNDLVFTIISSEDRVG 165
+S SD ++V H N+K +++ ++ +G
Sbjct: 823 ISTLSDNVIVFHLPEHDQVIENDKKTEIIIVLVEYFKAIG 862
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMK----RGMSLQEMTGLSVSPG 56
+F+ V K ++ + + +++TD A+Y ++ K K + R + L+E+ G+S+S
Sbjct: 767 VFADTVIKIDRRAKQKNYEMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTL 826
Query: 57 SDQLVVIH---------NNKGNDLVFTII 76
SD ++V H N+K +++ ++
Sbjct: 827 SDNVIVFHLPEHDQVIENDKKTEIIIVLV 855
>sp|B4TWB1|GATZ_SALSV D-tagatose-1,6-bisphosphate aldolase subunit GatZ OS=Salmonella
schwarzengrund (strain CVM19633) GN=gatZ PE=3 SV=1
Length = 423
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 34 AKFKAMKRGMSLQEMTGLSVSPGS--DQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKT 91
A F+A+ +L + + V PG D +IH + E +++ A H T
Sbjct: 202 AAFRALGLDEALNRVIAIVVQPGVEFDHTQIIHYQPQAAQALSAWIKETPMVYEA--HST 259
Query: 92 NKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP 137
+ R A RAL+ +A+ K+ F + +L +M VSP
Sbjct: 260 DYQTRQAYRALVRDHYAILKVGPALTFALREAIFALAQMENELVSP 305
>sp|Q57JK8|GATZ_SALCH D-tagatose-1,6-bisphosphate aldolase subunit GatZ OS=Salmonella
choleraesuis (strain SC-B67) GN=gatZ PE=3 SV=1
Length = 423
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 34 AKFKAMKRGMSLQEMTGLSVSPGS--DQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKT 91
A F+A+ +L + + V PG D +IH + E +++ A H T
Sbjct: 202 AAFRALGLDEALNRVIAIVVQPGVEFDHTQIIHYQPQAAQALSAWIKETPMVYEA--HST 259
Query: 92 NKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP 137
+ R A RAL+ +A+ K+ F + +L +M +SP
Sbjct: 260 DYQTRQAYRALVRDHYAILKVGPALTFALREAIFALAQMENELISP 305
>sp|B5REK7|GATZ_SALG2 D-tagatose-1,6-bisphosphate aldolase subunit GatZ OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=gatZ PE=3
SV=1
Length = 423
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 34 AKFKAMKRGMSLQEMTGLSVSPGS--DQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKT 91
A F+A+ +L + + V PG D +IH + E +++ A H T
Sbjct: 202 AAFRALGLDEALNRVIAIVVQPGVEFDHTQIIHYQPQAAQALSAWIKETPMVYEA--HST 259
Query: 92 NKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP 137
+ R A RAL+ +A+ K+ F + +L +M +SP
Sbjct: 260 DYQTRQAYRALVRDHYAILKVGPALTFALREAIFALAQMENELISP 305
>sp|B5QZS9|GATZ_SALEP D-tagatose-1,6-bisphosphate aldolase subunit GatZ OS=Salmonella
enteritidis PT4 (strain P125109) GN=gatZ PE=3 SV=1
Length = 423
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 34 AKFKAMKRGMSLQEMTGLSVSPGS--DQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKT 91
A F+A+ +L + + V PG D +IH + E +++ A H T
Sbjct: 202 AAFRALGLDEALNRVIAIVVQPGVEFDHTQIIHYQPQAAQALSAWIKETPMVYEA--HST 259
Query: 92 NKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP 137
+ R A RAL+ +A+ K+ F + +L +M +SP
Sbjct: 260 DYQTRQAYRALVRDHYAILKVGPALTFALREAIFALAQMENELISP 305
>sp|Q8NA23|WDR31_HUMAN WD repeat-containing protein 31 OS=Homo sapiens GN=WDR31 PE=2 SV=1
Length = 367
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 51 LSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKF-NRCADRALLVTDFAV 109
L VS G D+ VV +N K ++V E + A + K+++F + DR +++ D
Sbjct: 75 LCVSGGKDKTVVAYNWKTGNVVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWD--- 131
Query: 110 YKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLV 143
L ++ + G ++ +TGL+VSP S QL
Sbjct: 132 --LHGSSQPRQQLCGHAM-VVTGLAVSPDSSQLC 162
>sp|Q9JHB4|WDR31_MOUSE WD repeat-containing protein 31 OS=Mus musculus GN=Wdr31 PE=2 SV=1
Length = 367
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 51 LSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNK-FNRCADRALLVTDFAV 109
L +S G D+ V +N K +V E + A + K N+ F+ D+ +L+ D
Sbjct: 75 LCISGGKDKTAVAYNWKTGRMVKRFTGHEREITKIACIPKANQFFSASRDKTVLMWDL-- 132
Query: 110 YKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVF 155
G+ + +TGL+VSP S QL ++ N L+
Sbjct: 133 ----QGSSHPRQQLSGHAMVVTGLAVSPDSSQLCT--GSRDNSLLL 172
>sp|Q92002|MYO1C_LITCT Unconventional myosin-Ic OS=Lithobates catesbeiana GN=Myo1c PE=2
SV=1
Length = 1028
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 55 PGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCA----DRALLVTDFAVY 110
P S + I+ GND + T I + + K++R R LL+T A Y
Sbjct: 854 PQSVPRLFINTRLGNDEINTKILQQLESQTLTYAVPVVKYDRKGYKPRRRQLLLTQNAAY 913
Query: 111 KLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIH 146
++ MK+ + +TG+SVS SD L V+H
Sbjct: 914 LVEEAK----MKQRIDYANLTGISVSSLSDNLFVLH 945
Score = 31.2 bits (69), Expect = 3.9, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 18 RALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIH-----NNKGNDLV 72
R LL+T A Y ++ MK+ + +TG+SVS SD L V+H N + D +
Sbjct: 903 RQLLLTQNAAYLVEEAK----MKQRIDYANLTGISVSSLSDNLFVLHVKCEDNKQKGDAI 958
Query: 73 FT---IISSEDRVMFSAFVHKTNKFN 95
+I + +V +A K N N
Sbjct: 959 LQSDHVIETLTKVAITA--EKINNIN 982
>sp|Q12965|MYO1E_HUMAN Unconventional myosin-Ie OS=Homo sapiens GN=MYO1E PE=1 SV=2
Length = 1108
Score = 32.3 bits (72), Expect = 1.7, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 76 ISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKL---------DSGAKFKAMKRGMS 126
+ +++ F+ V K ++ + R LL+T +Y + D G + +KR +
Sbjct: 758 VGKREKIDFADTVTKYDRRFKGVKRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRKIE 817
Query: 127 LQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
++ + +S+S D + ++H + + L+ ++ + E + LA RY
Sbjct: 818 IERILSVSLSTMQDDIFILHEQEYDSLLESVFKT-----EFLSLLAKRY 861
>sp|E9Q634|MYO1E_MOUSE Unconventional myosin-Ie OS=Mus musculus GN=Myo1e PE=1 SV=1
Length = 1107
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 76 ISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKL---------DSGAKFKAMKRGMS 126
+ +++ F+ V K ++ + R LL+T +Y + D G + +KR +
Sbjct: 758 VGKREKIDFADTVTKYDRRFKGVKRDLLLTPKCLYLIGREKVKQGPDKGVVKEVLKRRIE 817
Query: 127 LQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
++ + +S+S D + ++H + + L+ ++ + E + LA RY
Sbjct: 818 VERILSVSLSTMQDDIFILHEQEYDSLLESVFKT-----EFLSLLAKRY 861
>sp|Q049W8|LEPA_LACDB Elongation factor 4 OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC BAA-365) GN=lepA PE=3 SV=1
Length = 612
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 2 FSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFK-AMKRGMSLQEMTGLSVSPGSDQL 60
FS H + + ADR L +TD S + K M M L+ G+++ S Q
Sbjct: 16 FSIVAHVDHGKSTIADRILELTDTV-----SKRQLKNQMLDDMPLERQRGITIKMNSVQ- 69
Query: 61 VVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTD 106
V H N G D +F +I + V FS V ++ C + A+LV D
Sbjct: 70 VKYHANDGEDYIFHLIDTPGHVDFSYEVSRS--LAAC-EGAVLVVD 112
>sp|Q1G9R4|LEPA_LACDA Elongation factor 4 OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC 11842 / DSM 20081) GN=lepA PE=3 SV=1
Length = 612
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 2 FSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFK-AMKRGMSLQEMTGLSVSPGSDQL 60
FS H + + ADR L +TD S + K M M L+ G+++ S Q
Sbjct: 16 FSIVAHVDHGKSTIADRILELTDTV-----SKRQLKNQMLDDMPLERQRGITIKMNSVQ- 69
Query: 61 VVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTD 106
V H N G D +F +I + V FS V ++ C + A+LV D
Sbjct: 70 VKYHANDGEDYIFHLIDTPGHVDFSYEVSRS--LAAC-EGAVLVVD 112
>sp|Q63356|MYO1E_RAT Unconventional myosin-Ie OS=Rattus norvegicus GN=Myo1e PE=1 SV=1
Length = 1107
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 76 ISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKL---------DSGAKFKAMKRGMS 126
+ +++ F+ V K ++ + R LL+T +Y + D G + +KR +
Sbjct: 758 VGKREKIDFADIVTKYDRRFKGVKRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRKIE 817
Query: 127 LQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
++ + +S+S D + ++H + + L+ ++ + E + L RY
Sbjct: 818 VERILSVSLSTMQDDIFILHEQEYDSLLESVFKT-----EFLSLLTKRY 861
>sp|P0CP00|MYO1_CRYNJ Myosin-1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=MYO1 PE=3 SV=1
Length = 1274
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 51 LSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSA----FVHKTNKFNRCADRALLVTD 106
L ++ GS Q ++ N IS ++V FS+ V K + ++ + R L++TD
Sbjct: 795 LDIAGGSAQGEMLRNA-------ATISPAEQVHFSSRAELLVSKLGRSSKLSPRFLIITD 847
Query: 107 FAVYKLDSGAK----FKAMKRGMSLQEMTGLSVSPGSDQLVVIHNN--KGNDLVFTII 158
AVY + S A+ +++R + L + +S++ D V ++ N + D +FT +
Sbjct: 848 KAVYFVVSQARDGRVSTSLERKIPLVTIKAISMTNLRDDFVALNVNACEEGDPIFTCV 905
>sp|P0CP01|MYO1_CRYNB Myosin-1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=MYO1 PE=3 SV=1
Length = 1274
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 51 LSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSA----FVHKTNKFNRCADRALLVTD 106
L ++ GS Q ++ N IS ++V FS+ V K + ++ + R L++TD
Sbjct: 795 LDIAGGSAQGEMLRNA-------ATISPAEQVHFSSRAELLVSKLGRSSKLSPRFLIITD 847
Query: 107 FAVYKLDSGAK----FKAMKRGMSLQEMTGLSVSPGSDQLVVIHNN--KGNDLVFTII 158
AVY + S A+ +++R + L + +S++ D V ++ N + D +FT +
Sbjct: 848 KAVYFVVSQARDGRVSTSLERKIPLVTIKAISMTNLRDDFVALNVNACEEGDPIFTCV 905
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 30.0 bits (66), Expect = 7.1, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 41 RGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCAD 99
RG++ L VS G D V + N K L+F++ D V F H+ C+D
Sbjct: 57 RGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSD 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,833,753
Number of Sequences: 539616
Number of extensions: 2187339
Number of successful extensions: 5456
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5399
Number of HSP's gapped (non-prelim): 62
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)